Query 026679
Match_columns 235
No_of_seqs 615 out of 1492
Neff 11.9
Searched_HMMs 29240
Date Mon Mar 25 19:27:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026679.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026679hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 4E-41 1.4E-45 250.6 25.8 207 2-214 110-320 (321)
2 3ow8_A WD repeat-containing pr 100.0 1.3E-40 4.4E-45 247.9 28.0 205 7-217 73-281 (321)
3 2ynn_A Coatomer subunit beta'; 100.0 1.2E-40 4.1E-45 246.3 27.6 213 2-218 43-262 (304)
4 1vyh_C Platelet-activating fac 100.0 9.5E-41 3.3E-45 256.4 26.1 211 2-218 138-372 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 3.7E-40 1.3E-44 247.3 28.1 209 6-217 47-259 (340)
6 4gqb_B Methylosome protein 50; 100.0 1.6E-40 5.6E-45 249.2 25.7 203 10-217 123-333 (344)
7 1got_B GT-beta; complex (GTP-b 100.0 2.7E-40 9.1E-45 248.1 26.6 202 6-212 135-340 (340)
8 1vyh_C Platelet-activating fac 100.0 2.1E-40 7.3E-45 254.5 26.3 207 2-214 180-410 (410)
9 2pbi_B Guanine nucleotide-bind 100.0 7.7E-40 2.6E-44 246.8 28.1 203 6-212 146-354 (354)
10 2ynn_A Coatomer subunit beta'; 100.0 6.7E-40 2.3E-44 242.4 26.2 208 5-217 4-219 (304)
11 4gqb_B Methylosome protein 50; 100.0 8.3E-40 2.8E-44 245.4 25.4 204 12-220 80-294 (344)
12 2pbi_B Guanine nucleotide-bind 100.0 5.3E-39 1.8E-43 242.3 27.6 209 6-216 56-272 (354)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.4E-39 8.4E-44 243.3 24.9 209 4-214 5-224 (345)
14 2pm7_B Protein transport prote 100.0 5.3E-39 1.8E-43 236.8 26.1 207 8-216 3-239 (297)
15 3frx_A Guanine nucleotide-bind 100.0 4.7E-39 1.6E-43 239.3 25.4 206 5-217 8-229 (319)
16 4ery_A WD repeat-containing pr 100.0 1.6E-38 5.6E-43 235.7 28.0 206 6-217 15-225 (312)
17 2xzm_R RACK1; ribosome, transl 100.0 1.6E-38 5.5E-43 238.7 27.6 205 5-214 12-243 (343)
18 4g56_B MGC81050 protein; prote 100.0 7.1E-39 2.4E-43 241.8 24.8 201 11-216 136-344 (357)
19 3iz6_a 40S ribosomal protein R 100.0 4.8E-39 1.6E-43 244.7 22.5 213 5-217 57-282 (380)
20 2hes_X YDR267CP; beta-propelle 100.0 3E-38 1E-42 236.1 26.2 213 2-216 2-231 (330)
21 1nr0_A Actin interacting prote 100.0 3.8E-38 1.3E-42 253.1 27.8 213 2-218 47-358 (611)
22 3frx_A Guanine nucleotide-bind 100.0 7.4E-38 2.5E-42 232.9 27.1 204 5-216 56-268 (319)
23 3iz6_a 40S ribosomal protein R 100.0 4.3E-38 1.5E-42 239.5 26.0 208 6-216 149-376 (380)
24 3f3f_A Nucleoporin SEH1; struc 100.0 1E-37 3.6E-42 233.7 26.6 210 8-217 5-339 (351)
25 1erj_A Transcriptional repress 100.0 5.3E-38 1.8E-42 240.0 24.8 214 2-215 153-389 (393)
26 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.5E-37 1.2E-41 231.6 27.3 205 11-216 58-284 (345)
27 3bg1_A Protein SEC13 homolog; 100.0 9.8E-38 3.3E-42 231.9 23.2 206 8-215 7-247 (316)
28 2pm7_B Protein transport prote 100.0 4.3E-37 1.5E-41 226.6 26.0 210 4-215 43-285 (297)
29 1erj_A Transcriptional repress 100.0 4.3E-37 1.5E-41 235.0 26.7 198 16-218 125-344 (393)
30 2hes_X YDR267CP; beta-propelle 100.0 4.6E-37 1.6E-41 229.6 26.2 204 12-216 56-281 (330)
31 3jrp_A Fusion protein of prote 100.0 1.7E-37 5.9E-42 235.4 24.2 211 4-216 1-241 (379)
32 4ery_A WD repeat-containing pr 100.0 1.5E-36 5.1E-41 225.1 28.1 210 2-214 95-311 (312)
33 4g56_B MGC81050 protein; prote 100.0 1.6E-37 5.5E-42 234.4 23.2 206 9-219 89-305 (357)
34 2xzm_R RACK1; ribosome, transl 100.0 1.4E-36 4.8E-41 228.2 27.6 208 5-218 67-288 (343)
35 4h5i_A Guanine nucleotide-exch 100.0 5.6E-37 1.9E-41 232.1 25.5 201 13-216 132-344 (365)
36 3dwl_C Actin-related protein 2 100.0 2.1E-37 7.3E-42 235.2 20.8 207 5-215 46-281 (377)
37 2ymu_A WD-40 repeat protein; u 100.0 9.4E-37 3.2E-41 243.5 25.3 200 3-212 374-577 (577)
38 4gga_A P55CDC, cell division c 100.0 5.7E-36 1.9E-40 230.6 27.4 212 2-216 133-396 (420)
39 3dm0_A Maltose-binding peripla 100.0 4.1E-36 1.4E-40 244.7 27.0 206 8-217 376-594 (694)
40 1nr0_A Actin interacting prote 100.0 1.1E-35 3.6E-40 239.0 28.3 210 4-217 137-399 (611)
41 4e54_B DNA damage-binding prot 100.0 1.7E-36 5.8E-41 234.6 21.3 205 8-217 113-329 (435)
42 3dwl_C Actin-related protein 2 100.0 4.1E-37 1.4E-41 233.6 16.7 206 10-218 7-239 (377)
43 3vl1_A 26S proteasome regulato 100.0 2.2E-35 7.6E-40 227.1 26.4 210 3-217 87-324 (420)
44 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-35 4.6E-40 224.7 24.8 208 6-215 44-274 (372)
45 3zwl_B Eukaryotic translation 100.0 3.1E-35 1E-39 222.2 26.6 206 8-218 26-252 (369)
46 4aow_A Guanine nucleotide-bind 100.0 3.7E-35 1.3E-39 219.7 26.3 209 4-217 28-248 (340)
47 2j04_B YDR362CP, TAU91; beta p 100.0 4.9E-36 1.7E-40 235.6 22.0 205 9-217 202-430 (524)
48 4ggc_A P55CDC, cell division c 100.0 8.8E-35 3E-39 215.8 27.2 211 2-215 53-315 (318)
49 3bg1_A Protein SEC13 homolog; 100.0 4.7E-36 1.6E-40 222.9 20.1 208 6-214 49-292 (316)
50 1k8k_C P40, ARP2/3 complex 41 100.0 3.8E-35 1.3E-39 222.2 25.2 207 9-217 3-235 (372)
51 2aq5_A Coronin-1A; WD40 repeat 100.0 5.8E-35 2E-39 223.8 26.4 207 6-217 73-301 (402)
52 3k26_A Polycomb protein EED; W 100.0 3.5E-36 1.2E-40 227.3 19.2 211 2-214 103-365 (366)
53 3ei3_B DNA damage-binding prot 100.0 3E-35 1E-39 223.9 24.1 208 5-218 64-285 (383)
54 3dm0_A Maltose-binding peripla 100.0 1.8E-35 6.2E-40 240.9 24.0 208 6-217 422-634 (694)
55 3vl1_A 26S proteasome regulato 100.0 3E-35 1E-39 226.4 22.9 209 2-216 127-366 (420)
56 3jrp_A Fusion protein of prote 100.0 5.9E-35 2E-39 221.5 24.2 211 3-215 44-287 (379)
57 3zwl_B Eukaryotic translation 100.0 1.8E-34 6.3E-39 217.9 25.9 209 2-216 62-347 (369)
58 4e54_B DNA damage-binding prot 100.0 2.3E-35 8E-40 228.2 21.3 167 7-178 157-330 (435)
59 3dw8_B Serine/threonine-protei 100.0 1.3E-34 4.3E-39 224.5 25.1 202 13-215 27-315 (447)
60 1gxr_A ESG1, transducin-like e 100.0 7.1E-34 2.4E-38 212.3 28.3 200 12-219 95-300 (337)
61 3jro_A Fusion protein of prote 100.0 6.7E-35 2.3E-39 239.2 24.6 208 7-216 2-239 (753)
62 1sq9_A Antiviral protein SKI8; 100.0 4.7E-35 1.6E-39 223.6 22.2 205 7-216 109-396 (397)
63 3gre_A Serine/threonine-protei 100.0 1.8E-35 6.2E-40 228.8 20.0 214 3-217 51-294 (437)
64 1gxr_A ESG1, transducin-like e 100.0 4.4E-34 1.5E-38 213.5 26.3 199 6-213 133-335 (337)
65 3mmy_A MRNA export factor; mRN 100.0 1.1E-34 3.7E-39 219.1 22.6 197 4-205 29-334 (368)
66 2ymu_A WD-40 repeat protein; u 100.0 1.8E-34 6.3E-39 230.3 24.9 205 5-219 335-543 (577)
67 1sq9_A Antiviral protein SKI8; 100.0 1.6E-34 5.4E-39 220.7 21.9 211 6-217 54-324 (397)
68 1r5m_A SIR4-interacting protei 100.0 5.5E-34 1.9E-38 219.1 24.9 206 3-215 138-425 (425)
69 3i2n_A WD repeat-containing pr 100.0 9.6E-35 3.3E-39 218.7 20.1 209 3-216 99-354 (357)
70 4aez_A CDC20, WD repeat-contai 100.0 1.1E-33 3.8E-38 216.6 25.8 209 2-219 164-384 (401)
71 3mkq_A Coatomer beta'-subunit; 100.0 5.8E-34 2E-38 235.5 25.8 212 2-217 43-261 (814)
72 2pm9_A Protein WEB1, protein t 100.0 2.6E-34 9.1E-39 220.7 21.8 209 5-218 104-340 (416)
73 3v7d_B Cell division control p 100.0 2.6E-33 8.9E-38 218.3 27.4 209 2-217 150-383 (464)
74 3ei3_B DNA damage-binding prot 100.0 1.7E-33 5.7E-38 214.3 25.7 200 12-215 161-382 (383)
75 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-33 5E-38 212.7 25.0 209 2-216 7-272 (355)
76 3k26_A Polycomb protein EED; W 100.0 2.6E-34 8.9E-39 217.0 21.0 209 3-217 53-320 (366)
77 3mkq_A Coatomer beta'-subunit; 100.0 6.1E-34 2.1E-38 235.4 24.9 207 5-217 4-219 (814)
78 4aow_A Guanine nucleotide-bind 100.0 3.6E-33 1.2E-37 208.9 26.3 205 5-217 77-339 (340)
79 4aez_A CDC20, WD repeat-contai 100.0 3.2E-33 1.1E-37 214.1 26.1 208 3-216 122-337 (401)
80 2xyi_A Probable histone-bindin 100.0 8.4E-34 2.9E-38 219.2 22.3 213 4-219 171-414 (430)
81 4a11_B DNA excision repair pro 100.0 8.8E-33 3E-37 211.5 27.7 205 11-219 96-369 (408)
82 2aq5_A Coronin-1A; WD40 repeat 100.0 3.7E-34 1.3E-38 219.4 19.7 209 5-217 122-344 (402)
83 2oaj_A Protein SNI1; WD40 repe 100.0 2.9E-33 9.9E-38 232.8 26.5 200 11-217 14-244 (902)
84 4a11_B DNA excision repair pro 100.0 8.6E-33 2.9E-37 211.5 27.0 209 3-218 32-279 (408)
85 2pm9_A Protein WEB1, protein t 100.0 2.2E-33 7.6E-38 215.5 23.4 206 12-217 65-296 (416)
86 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-33 5E-38 211.8 21.6 194 21-218 43-247 (343)
87 3dw8_B Serine/threonine-protei 100.0 1E-33 3.6E-38 219.3 21.2 211 6-219 73-377 (447)
88 3jro_A Fusion protein of prote 100.0 2.1E-33 7.3E-38 230.3 24.0 212 3-216 42-286 (753)
89 4gq1_A NUP37; propeller, trans 100.0 1.2E-33 4.1E-38 215.9 20.5 209 6-214 128-388 (393)
90 3sfz_A APAF-1, apoptotic pepti 100.0 7.7E-33 2.6E-37 237.9 27.0 210 2-215 645-913 (1249)
91 1r5m_A SIR4-interacting protei 100.0 2.7E-32 9.3E-37 209.7 27.1 200 12-217 43-321 (425)
92 3v7d_B Cell division control p 100.0 1.8E-32 6.3E-37 213.5 25.8 209 2-219 191-425 (464)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.3E-32 7.8E-37 212.3 26.0 201 11-213 99-337 (450)
94 2j04_B YDR362CP, TAU91; beta p 100.0 6.6E-34 2.3E-38 223.5 17.3 202 8-216 260-518 (524)
95 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-32 5E-37 212.9 24.0 193 12-214 83-296 (588)
96 2w18_A PALB2, fancn, partner a 100.0 1.9E-32 6.7E-37 200.3 23.1 193 15-213 112-355 (356)
97 3gre_A Serine/threonine-protei 100.0 6E-33 2.1E-37 214.7 21.6 202 12-219 109-363 (437)
98 2xyi_A Probable histone-bindin 100.0 2E-32 6.7E-37 211.5 24.2 205 9-215 123-353 (430)
99 3i2n_A WD repeat-containing pr 100.0 4.9E-33 1.7E-37 209.4 20.2 200 12-217 63-293 (357)
100 3odt_A Protein DOA1; ubiquitin 100.0 6.7E-32 2.3E-36 199.7 25.8 203 4-220 94-301 (313)
101 1pgu_A Actin interacting prote 100.0 2.2E-32 7.5E-37 219.5 24.9 204 5-217 54-285 (615)
102 3sfz_A APAF-1, apoptotic pepti 100.0 3.8E-32 1.3E-36 233.6 27.9 203 9-217 610-873 (1249)
103 1yfq_A Cell cycle arrest prote 100.0 1.2E-32 4.1E-37 206.3 20.8 203 7-218 49-285 (342)
104 3odt_A Protein DOA1; ubiquitin 100.0 1.3E-31 4.6E-36 198.1 26.0 204 4-218 8-217 (313)
105 1yfq_A Cell cycle arrest prote 100.0 3.1E-32 1.1E-36 204.1 21.3 198 8-216 5-226 (342)
106 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-31 6E-36 206.5 25.7 204 2-216 161-366 (435)
107 3lrv_A PRE-mRNA-splicing facto 100.0 3.7E-32 1.3E-36 204.1 20.7 203 4-216 68-293 (343)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-31 9.6E-36 206.2 24.6 200 14-217 4-273 (450)
109 2oaj_A Protein SNI1; WD40 repe 100.0 4.1E-32 1.4E-36 226.0 20.9 209 9-218 430-735 (902)
110 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-31 5.9E-36 206.6 21.9 203 2-218 201-417 (435)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.7E-31 3E-35 203.1 25.9 205 2-216 227-443 (445)
112 2j04_A TAU60, YPL007P, hypothe 100.0 2.2E-31 7.6E-36 206.3 21.5 195 12-219 13-258 (588)
113 1pgu_A Actin interacting prote 100.0 4.2E-31 1.4E-35 212.1 23.5 203 11-218 15-241 (615)
114 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-30 7.1E-35 201.0 26.0 202 2-217 147-350 (445)
115 4h5i_A Guanine nucleotide-exch 100.0 3.2E-30 1.1E-34 195.1 19.7 171 2-175 165-343 (365)
116 1l0q_A Surface layer protein; 100.0 3.2E-28 1.1E-32 185.6 27.1 206 2-217 20-235 (391)
117 3f3f_A Nucleoporin SEH1; struc 100.0 4.2E-29 1.5E-33 186.9 21.0 178 5-182 48-344 (351)
118 4gq1_A NUP37; propeller, trans 100.0 9.3E-30 3.2E-34 194.4 17.1 202 14-219 89-352 (393)
119 3vu4_A KMHSV2; beta-propeller 100.0 6E-29 2.1E-33 187.5 21.2 208 2-216 89-337 (355)
120 2w18_A PALB2, fancn, partner a 100.0 6.1E-29 2.1E-33 181.9 18.7 167 3-173 167-355 (356)
121 1l0q_A Surface layer protein; 100.0 1.1E-27 3.8E-32 182.6 25.9 206 2-217 62-277 (391)
122 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-27 4E-32 183.9 25.0 209 4-222 168-394 (415)
123 3bws_A Protein LP49; two-domai 100.0 1E-27 3.5E-32 185.1 24.8 205 2-215 199-432 (433)
124 3bws_A Protein LP49; two-domai 100.0 1.6E-27 5.5E-32 184.0 25.1 200 9-217 164-392 (433)
125 4ggc_A P55CDC, cell division c 100.0 1.1E-26 3.9E-31 172.1 26.5 199 17-218 28-276 (318)
126 4gga_A P55CDC, cell division c 100.0 1.1E-26 3.8E-31 178.9 24.6 193 16-217 107-312 (420)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.6E-25 5.6E-30 172.0 21.2 209 3-221 104-350 (415)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 5.7E-26 2E-30 175.2 18.4 200 13-216 35-279 (434)
129 2ojh_A Uncharacterized protein 99.9 1.1E-24 3.9E-29 159.4 23.6 202 9-218 36-261 (297)
130 3mmy_A MRNA export factor; mRN 99.9 5.1E-25 1.8E-29 166.1 20.8 133 41-178 24-163 (368)
131 1nir_A Nitrite reductase; hemo 99.9 6.7E-24 2.3E-28 167.9 22.9 216 2-219 167-462 (543)
132 3u4y_A Uncharacterized protein 99.9 8E-24 2.7E-28 157.8 21.7 213 3-218 71-307 (331)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 7.8E-24 2.7E-28 163.4 21.1 197 13-214 91-332 (434)
134 3u4y_A Uncharacterized protein 99.9 3E-23 1E-27 154.7 23.6 210 2-218 28-255 (331)
135 3vgz_A Uncharacterized protein 99.9 2.1E-22 7.1E-27 151.3 27.4 199 14-218 40-265 (353)
136 1pby_B Quinohemoprotein amine 99.9 5.2E-23 1.8E-27 153.5 23.4 206 3-218 20-313 (337)
137 1xfd_A DIP, dipeptidyl aminope 99.9 2.8E-24 9.5E-29 175.9 17.8 200 15-218 17-292 (723)
138 2ecf_A Dipeptidyl peptidase IV 99.9 2.8E-23 9.6E-28 170.4 23.1 200 14-218 36-324 (741)
139 3vgz_A Uncharacterized protein 99.9 6.2E-23 2.1E-27 154.1 22.9 208 3-217 78-305 (353)
140 1ri6_A Putative isomerase YBHE 99.9 1E-22 3.5E-27 152.3 23.0 204 9-214 79-307 (343)
141 3hfq_A Uncharacterized protein 99.9 1.4E-22 4.9E-27 152.1 23.6 206 8-214 79-316 (347)
142 1nir_A Nitrite reductase; hemo 99.9 1.2E-22 4E-27 160.8 22.4 193 21-219 144-359 (543)
143 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-22 5E-27 151.8 21.9 208 2-217 29-327 (349)
144 1ri6_A Putative isomerase YBHE 99.9 2.5E-22 8.6E-27 150.1 23.0 200 12-214 35-261 (343)
145 2z3z_A Dipeptidyl aminopeptida 99.9 9.7E-23 3.3E-27 166.4 20.7 209 9-220 115-396 (706)
146 2ojh_A Uncharacterized protein 99.9 6.2E-23 2.1E-27 150.1 16.9 197 4-205 73-290 (297)
147 1xfd_A DIP, dipeptidyl aminope 99.9 9.4E-23 3.2E-27 166.8 19.5 210 3-217 46-347 (723)
148 2z3z_A Dipeptidyl aminopeptida 99.9 2E-22 6.7E-27 164.6 19.4 193 15-214 82-341 (706)
149 2ecf_A Dipeptidyl peptidase IV 99.9 6.5E-22 2.2E-26 162.3 21.8 204 6-215 143-413 (741)
150 3o4h_A Acylamino-acid-releasin 99.9 7E-22 2.4E-26 158.1 21.0 205 3-219 9-231 (582)
151 3hfq_A Uncharacterized protein 99.9 3.8E-21 1.3E-25 144.3 22.9 201 12-214 37-270 (347)
152 1jmx_B Amine dehydrogenase; ox 99.9 1.6E-21 5.5E-26 146.1 19.7 193 19-218 4-287 (349)
153 1k32_A Tricorn protease; prote 99.9 1.1E-21 3.8E-26 166.3 19.7 199 7-218 238-464 (1045)
154 1z68_A Fibroblast activation p 99.9 3.6E-22 1.2E-26 163.3 16.2 194 18-219 19-295 (719)
155 1k32_A Tricorn protease; prote 99.9 2.8E-21 9.6E-26 163.9 20.7 190 13-213 294-500 (1045)
156 1z68_A Fibroblast activation p 99.9 4.4E-22 1.5E-26 162.9 15.2 214 3-221 45-352 (719)
157 4a5s_A Dipeptidyl peptidase 4 99.9 7.4E-21 2.5E-25 156.1 20.9 195 14-217 16-296 (740)
158 1pby_B Quinohemoprotein amine 99.9 3.6E-20 1.2E-24 138.1 22.9 184 27-217 2-271 (337)
159 3scy_A Hypothetical bacterial 99.9 7.3E-20 2.5E-24 138.1 23.6 199 13-214 98-336 (361)
160 1jof_A Carboxy-CIS,CIS-muconat 99.9 4.3E-20 1.5E-24 139.6 22.1 197 15-214 40-290 (365)
161 3o4h_A Acylamino-acid-releasin 99.9 3.1E-20 1.1E-24 148.6 20.2 184 17-215 112-315 (582)
162 3scy_A Hypothetical bacterial 99.9 3.3E-19 1.1E-23 134.5 24.7 199 13-214 48-290 (361)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 8.7E-20 3E-24 138.0 19.9 200 17-216 85-342 (365)
164 3pe7_A Oligogalacturonate lyas 99.9 1.5E-19 5E-24 137.6 21.1 208 3-218 19-276 (388)
165 4a5s_A Dipeptidyl peptidase 4 99.8 4E-20 1.4E-24 151.7 16.9 217 3-223 45-361 (740)
166 1q7f_A NHL, brain tumor CG1071 99.8 1.9E-17 6.4E-22 121.0 26.3 197 13-215 75-280 (286)
167 2oiz_A Aromatic amine dehydrog 99.8 5.3E-18 1.8E-22 127.9 22.4 206 2-216 39-335 (361)
168 3azo_A Aminopeptidase; POP fam 99.8 2.3E-18 7.8E-23 139.7 20.3 205 13-220 128-374 (662)
169 3fvz_A Peptidyl-glycine alpha- 99.8 7.8E-18 2.7E-22 125.5 21.3 198 13-216 89-323 (329)
170 3e5z_A Putative gluconolactona 99.8 8.2E-18 2.8E-22 123.5 20.6 208 5-218 18-249 (296)
171 3pe7_A Oligogalacturonate lyas 99.8 1.3E-18 4.6E-23 132.3 16.5 211 3-219 69-333 (388)
172 1q7f_A NHL, brain tumor CG1071 99.8 7.9E-17 2.7E-21 117.6 25.0 199 12-218 27-241 (286)
173 3azo_A Aminopeptidase; POP fam 99.8 6.6E-18 2.3E-22 137.0 20.8 204 7-217 16-276 (662)
174 3c5m_A Oligogalacturonate lyas 99.8 1.1E-18 3.7E-23 132.9 14.1 209 3-218 19-276 (396)
175 3fvz_A Peptidyl-glycine alpha- 99.8 8.4E-17 2.9E-21 119.9 23.9 202 14-218 23-280 (329)
176 3e5z_A Putative gluconolactona 99.8 1.6E-16 5.5E-21 116.6 24.2 201 7-219 61-290 (296)
177 2xdw_A Prolyl endopeptidase; a 99.8 1.5E-16 5E-21 130.2 24.6 202 12-216 122-369 (710)
178 3c5m_A Oligogalacturonate lyas 99.8 1.1E-17 3.8E-22 127.4 15.1 196 17-221 83-335 (396)
179 2oiz_A Aromatic amine dehydrog 99.8 2E-16 6.9E-21 119.3 21.2 180 15-199 108-360 (361)
180 3dsm_A Uncharacterized protein 99.8 2.6E-16 9E-21 117.2 21.2 207 3-220 73-307 (328)
181 1xip_A Nucleoporin NUP159; bet 99.8 1.1E-16 3.9E-21 120.4 17.7 172 16-205 39-232 (388)
182 2bkl_A Prolyl endopeptidase; m 99.8 1.9E-16 6.6E-21 129.2 20.2 198 12-214 118-348 (695)
183 3no2_A Uncharacterized protein 99.7 1.3E-15 4.4E-20 110.6 22.1 182 26-217 5-197 (276)
184 2dg1_A DRP35, lactonase; beta 99.7 3E-15 1E-19 111.6 24.5 202 9-216 39-264 (333)
185 1rwi_B Serine/threonine-protei 99.7 3.7E-15 1.3E-19 107.8 23.1 195 15-217 67-266 (270)
186 3dsm_A Uncharacterized protein 99.7 7.7E-15 2.6E-19 109.3 24.9 196 16-219 45-257 (328)
187 2dg1_A DRP35, lactonase; beta 99.7 6.6E-16 2.2E-20 115.1 18.6 194 14-215 5-213 (333)
188 2xdw_A Prolyl endopeptidase; a 99.7 3.1E-15 1.1E-19 122.4 23.3 198 16-217 172-416 (710)
189 3no2_A Uncharacterized protein 99.7 2.9E-15 9.9E-20 108.7 20.4 194 2-205 23-231 (276)
190 2gop_A Trilobed protease; beta 99.7 8E-16 2.7E-20 115.3 17.8 181 15-215 59-291 (347)
191 1rwi_B Serine/threonine-protei 99.7 1.7E-14 5.7E-19 104.3 23.8 196 16-218 25-225 (270)
192 2gop_A Trilobed protease; beta 99.7 4.3E-15 1.5E-19 111.3 19.7 179 17-214 106-330 (347)
193 1qks_A Cytochrome CD1 nitrite 99.7 2.3E-14 8E-19 113.6 23.3 211 3-216 186-478 (567)
194 1yr2_A Prolyl oligopeptidase; 99.7 1.6E-14 5.5E-19 118.7 21.0 196 13-213 161-391 (741)
195 1qks_A Cytochrome CD1 nitrite 99.7 9.1E-14 3.1E-18 110.2 23.9 189 24-218 165-376 (567)
196 2mad_H Methylamine dehydrogena 99.6 2.7E-13 9.3E-18 102.5 24.2 211 3-219 56-354 (373)
197 2bkl_A Prolyl endopeptidase; m 99.6 1.6E-14 5.3E-19 118.0 18.1 195 18-220 171-402 (695)
198 2z2n_A Virginiamycin B lyase; 99.6 8.6E-13 2.9E-17 96.5 25.7 196 10-213 10-211 (299)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3E-13 1E-17 99.8 23.1 195 13-215 69-299 (314)
200 3hrp_A Uncharacterized protein 99.6 7.8E-13 2.7E-17 101.3 25.8 199 15-217 131-356 (409)
201 3iuj_A Prolyl endopeptidase; h 99.6 8.2E-14 2.8E-18 113.6 20.7 200 12-217 126-361 (693)
202 3g4e_A Regucalcin; six bladed 99.6 8.2E-13 2.8E-17 97.0 23.7 186 14-205 53-260 (297)
203 2z2n_A Virginiamycin B lyase; 99.6 2.8E-12 9.4E-17 93.8 26.0 195 13-216 97-296 (299)
204 3c75_H MADH, methylamine dehyd 99.6 1.5E-13 5E-18 104.9 18.3 213 2-219 107-406 (426)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.3E-12 4.5E-17 96.4 21.6 197 14-216 17-257 (314)
206 3dr2_A Exported gluconolactona 99.6 4.8E-13 1.6E-17 98.6 18.4 201 9-219 39-271 (305)
207 2qc5_A Streptogramin B lactona 99.6 2.3E-11 7.8E-16 88.9 25.9 192 14-214 61-259 (300)
208 2qc5_A Streptogramin B lactona 99.6 2.3E-11 7.8E-16 88.9 25.8 193 13-214 18-217 (300)
209 3g4e_A Regucalcin; six bladed 99.5 3.2E-12 1.1E-16 93.8 20.7 196 13-217 11-231 (297)
210 1mda_H Methylamine dehydrogena 99.5 2E-12 7E-17 97.0 18.9 209 2-219 54-350 (368)
211 2ghs_A AGR_C_1268P; regucalcin 99.5 7.6E-12 2.6E-16 93.0 21.9 190 16-216 50-261 (326)
212 2iwa_A Glutamine cyclotransfer 99.5 6.2E-12 2.1E-16 89.7 19.8 204 4-215 9-237 (266)
213 3dr2_A Exported gluconolactona 99.5 1.1E-11 3.8E-16 91.3 21.8 193 9-212 80-303 (305)
214 1yr2_A Prolyl oligopeptidase; 99.5 4.4E-12 1.5E-16 104.3 21.4 199 17-221 211-447 (741)
215 3hrp_A Uncharacterized protein 99.5 1.5E-11 5.1E-16 94.2 22.9 188 20-213 176-408 (409)
216 1xip_A Nucleoporin NUP159; bet 99.5 2E-12 6.8E-17 97.4 17.2 136 12-161 86-230 (388)
217 2ghs_A AGR_C_1268P; regucalcin 99.5 3.7E-11 1.3E-15 89.3 23.7 182 14-205 89-290 (326)
218 3sjl_D Methylamine dehydrogena 99.5 8.6E-12 2.9E-16 93.7 19.7 194 17-217 35-258 (386)
219 3nol_A Glutamine cyclotransfer 99.5 1.5E-11 5.1E-16 86.9 19.3 198 6-213 33-252 (262)
220 2qe8_A Uncharacterized protein 99.5 1.5E-11 5.2E-16 92.0 20.1 194 12-205 64-309 (343)
221 2hz6_A Endoplasmic reticulum t 99.5 1.5E-14 5.2E-19 109.3 3.4 180 25-217 8-194 (369)
222 3sjl_D Methylamine dehydrogena 99.5 1.7E-11 5.8E-16 92.1 19.4 197 17-218 139-366 (386)
223 2ece_A 462AA long hypothetical 99.4 5.6E-11 1.9E-15 90.2 18.6 185 18-205 141-399 (462)
224 1fwx_A Nitrous oxide reductase 99.4 5.2E-11 1.8E-15 93.3 17.9 199 15-219 134-435 (595)
225 2mad_H Methylamine dehydrogena 99.4 1.4E-09 4.7E-14 82.3 23.7 186 21-216 27-244 (373)
226 2qe8_A Uncharacterized protein 99.4 1.6E-10 5.5E-15 86.5 18.3 196 15-213 17-276 (343)
227 3iuj_A Prolyl endopeptidase; h 99.3 6.5E-11 2.2E-15 96.7 17.2 193 17-219 177-409 (693)
228 3mbr_X Glutamine cyclotransfer 99.3 1E-09 3.5E-14 76.9 20.6 199 5-213 10-231 (243)
229 2hz6_A Endoplasmic reticulum t 99.3 1.1E-13 3.9E-18 104.5 0.8 183 2-200 27-217 (369)
230 2ece_A 462AA long hypothetical 99.3 3E-10 1E-14 86.3 18.6 186 24-214 93-351 (462)
231 3nok_A Glutaminyl cyclase; bet 99.3 4.4E-10 1.5E-14 79.5 17.8 179 17-205 57-253 (268)
232 3c75_H MADH, methylamine dehyd 99.3 1.1E-09 3.8E-14 83.6 18.8 185 24-216 82-296 (426)
233 3qqz_A Putative uncharacterize 99.2 8.3E-08 2.8E-12 68.2 25.2 200 10-211 22-249 (255)
234 1kb0_A Quinohemoprotein alcoho 99.2 1.7E-09 5.9E-14 87.9 18.9 190 26-218 174-510 (677)
235 1fwx_A Nitrous oxide reductase 99.2 3E-09 1E-13 83.5 18.3 181 25-215 100-361 (595)
236 2xe4_A Oligopeptidase B; hydro 99.2 1.5E-08 5.2E-13 83.5 23.1 193 16-213 175-398 (751)
237 3hxj_A Pyrrolo-quinoline quino 99.2 1.4E-08 4.9E-13 75.2 20.1 194 4-214 87-283 (330)
238 3hxj_A Pyrrolo-quinoline quino 99.2 6.3E-09 2.2E-13 77.1 17.8 187 13-215 135-324 (330)
239 1kb0_A Quinohemoprotein alcoho 99.1 1.1E-08 3.9E-13 83.1 19.9 181 18-203 246-536 (677)
240 1yiq_A Quinohemoprotein alcoho 99.1 1.2E-08 4.2E-13 83.1 20.0 181 35-218 182-508 (689)
241 1yiq_A Quinohemoprotein alcoho 99.1 1.8E-08 6E-13 82.2 20.6 182 19-203 239-534 (689)
242 1mda_H Methylamine dehydrogena 99.1 9.1E-10 3.1E-14 82.7 11.6 87 106-196 269-366 (368)
243 2fp8_A Strictosidine synthase; 99.1 5.4E-08 1.8E-12 72.1 20.4 185 16-205 20-247 (322)
244 1npe_A Nidogen, entactin; glyc 99.1 6.2E-07 2.1E-11 64.5 25.4 194 15-217 36-240 (267)
245 1npe_A Nidogen, entactin; glyc 99.1 3.9E-07 1.3E-11 65.5 23.7 182 27-216 2-199 (267)
246 3q7m_A Lipoprotein YFGL, BAMB; 99.1 6E-08 2.1E-12 73.3 19.8 182 25-217 102-298 (376)
247 2fp8_A Strictosidine synthase; 99.0 1.9E-07 6.4E-12 69.2 20.2 192 16-218 81-316 (322)
248 3q7m_A Lipoprotein YFGL, BAMB; 99.0 3E-07 1E-11 69.5 21.4 183 26-217 53-260 (376)
249 2iwa_A Glutamine cyclotransfer 99.0 2.3E-07 7.9E-12 66.3 19.3 162 47-218 10-184 (266)
250 3nol_A Glutamine cyclotransfer 98.9 5.7E-07 1.9E-11 63.7 18.8 159 48-218 33-204 (262)
251 2p4o_A Hypothetical protein; p 98.9 2.5E-06 8.4E-11 62.7 23.3 194 15-215 32-242 (306)
252 3v64_C Agrin; beta propeller, 98.9 4E-06 1.4E-10 62.8 24.3 196 15-218 34-237 (349)
253 1ijq_A LDL receptor, low-densi 98.9 6E-06 2.1E-10 60.9 25.0 181 36-219 10-199 (316)
254 2p4o_A Hypothetical protein; p 98.9 1.2E-06 4.1E-11 64.3 20.4 184 15-205 72-276 (306)
255 3nok_A Glutaminyl cyclase; bet 98.9 6.9E-07 2.4E-11 63.3 17.6 159 47-218 44-213 (268)
256 3p5b_L Low density lipoprotein 98.8 8E-06 2.7E-10 62.3 24.0 191 28-221 85-283 (400)
257 1kv9_A Type II quinohemoprotei 98.8 5.6E-07 1.9E-11 73.2 18.5 184 18-204 233-519 (668)
258 3amr_A 3-phytase; beta-propell 98.8 3.7E-06 1.3E-10 62.1 20.9 184 26-214 40-262 (355)
259 4hw6_A Hypothetical protein, I 98.8 4E-06 1.4E-10 64.6 22.2 194 16-214 140-373 (433)
260 3v65_B Low-density lipoprotein 98.8 1.7E-05 5.9E-10 60.2 24.8 191 15-212 116-315 (386)
261 3v64_C Agrin; beta propeller, 98.8 1.7E-05 5.7E-10 59.4 25.4 190 16-212 74-272 (349)
262 3mbr_X Glutamine cyclotransfer 98.8 4.4E-06 1.5E-10 58.6 19.1 147 60-218 26-182 (243)
263 3v65_B Low-density lipoprotein 98.8 9.1E-06 3.1E-10 61.7 22.5 193 18-218 80-280 (386)
264 3tc9_A Hypothetical hydrolase; 98.8 2E-06 6.8E-11 66.3 18.6 154 16-174 138-300 (430)
265 4a2l_A BT_4663, two-component 98.7 7.6E-06 2.6E-10 68.1 23.0 195 14-218 356-574 (795)
266 1flg_A Protein (quinoprotein e 98.7 9.1E-06 3.1E-10 65.1 21.5 180 19-203 250-545 (582)
267 2p9w_A MAL S 1 allergenic prot 98.7 2.9E-05 9.7E-10 57.0 22.2 157 15-175 13-215 (334)
268 2ad6_A Methanol dehydrogenase 98.7 1.1E-05 3.7E-10 64.5 21.7 188 27-218 161-497 (571)
269 4a2l_A BT_4663, two-component 98.7 4.7E-05 1.6E-09 63.3 25.9 198 14-218 262-483 (795)
270 3sov_A LRP-6, low-density lipo 98.7 3.8E-05 1.3E-09 56.7 26.5 195 16-216 36-239 (318)
271 2ad6_A Methanol dehydrogenase 98.7 7.7E-06 2.6E-10 65.4 20.1 180 20-204 240-524 (571)
272 1kv9_A Type II quinohemoprotei 98.6 5.1E-06 1.7E-10 67.7 18.3 187 26-218 66-336 (668)
273 2xe4_A Oligopeptidase B; hydro 98.6 4.4E-06 1.5E-10 69.0 17.8 138 60-204 179-337 (751)
274 1k3i_A Galactose oxidase precu 98.6 7.2E-07 2.5E-11 72.5 12.9 199 19-217 247-499 (656)
275 3m0c_C LDL receptor, low-densi 98.6 5.2E-05 1.8E-09 62.7 23.7 186 34-221 402-595 (791)
276 3sov_A LRP-6, low-density lipo 98.6 5.7E-05 2E-09 55.7 21.1 179 35-219 12-201 (318)
277 1w6s_A Methanol dehydrogenase 98.6 3.5E-05 1.2E-09 61.8 21.1 180 35-218 181-506 (599)
278 3tc9_A Hypothetical hydrolase; 98.6 8.1E-06 2.8E-10 62.9 17.0 148 59-215 141-301 (430)
279 1w6s_A Methanol dehydrogenase 98.6 3E-05 1E-09 62.2 20.3 177 19-200 245-529 (599)
280 3p5b_L Low density lipoprotein 98.6 0.00012 4E-09 55.9 25.6 193 14-213 111-318 (400)
281 1flg_A Protein (quinoprotein e 98.5 4.8E-05 1.6E-09 60.9 20.7 187 28-218 170-519 (582)
282 3v9f_A Two-component system se 98.5 0.00016 5.5E-09 60.0 23.3 198 14-217 312-526 (781)
283 3m0c_C LDL receptor, low-densi 98.5 0.00039 1.3E-08 57.6 25.1 191 15-213 424-630 (791)
284 1ijq_A LDL receptor, low-densi 98.5 0.00016 5.6E-09 53.2 26.8 193 15-215 30-238 (316)
285 1k3i_A Galactose oxidase precu 98.5 2.9E-05 1E-09 63.2 18.5 192 19-216 190-442 (656)
286 3v9f_A Two-component system se 98.5 0.0002 6.9E-09 59.5 23.7 195 14-217 406-613 (781)
287 3kya_A Putative phosphatase; s 98.4 0.00018 6.2E-09 56.1 21.6 155 16-174 140-340 (496)
288 2xbg_A YCF48-like protein; pho 98.4 0.00019 6.4E-09 53.2 23.1 189 15-212 122-319 (327)
289 4hw6_A Hypothetical protein, I 98.4 0.00014 4.8E-09 56.1 21.0 196 14-213 181-431 (433)
290 1n7d_A LDL receptor, low-densi 98.4 4.9E-06 1.7E-10 68.0 13.3 182 35-219 385-575 (699)
291 2p9w_A MAL S 1 allergenic prot 98.4 3.1E-05 1.1E-09 56.7 14.9 153 58-214 16-214 (334)
292 3qqz_A Putative uncharacterize 98.3 0.00031 1.1E-08 49.9 18.5 157 15-173 70-251 (255)
293 1n7d_A LDL receptor, low-densi 98.3 2.2E-05 7.4E-10 64.3 13.5 174 17-195 455-634 (699)
294 2xn4_A Kelch-like protein 2; s 98.2 0.00057 2E-08 49.8 20.2 190 25-221 61-282 (302)
295 2vpj_A Kelch-like protein 12; 98.2 0.00063 2.2E-08 49.6 20.1 186 25-216 62-279 (301)
296 3s94_A LRP-6, low-density lipo 98.2 0.0014 4.7E-08 53.0 24.7 195 15-217 40-245 (619)
297 3pbp_A Nucleoporin NUP82; beta 98.2 0.00092 3.1E-08 50.7 20.2 146 24-171 30-208 (452)
298 3ii7_A Kelch-like protein 7; p 98.2 0.00084 2.9E-08 49.1 19.4 185 25-217 55-274 (306)
299 3amr_A 3-phytase; beta-propell 98.1 0.00089 3.1E-08 49.6 18.5 176 3-182 58-271 (355)
300 1zgk_A Kelch-like ECH-associat 98.1 0.00082 2.8E-08 49.2 18.2 186 25-217 70-289 (308)
301 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0025 8.5E-08 51.6 24.7 178 34-218 13-200 (628)
302 3sre_A PON1, serum paraoxonase 98.1 0.0013 4.6E-08 49.1 18.3 153 59-215 54-252 (355)
303 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0029 1E-07 51.2 26.1 192 15-216 37-238 (628)
304 3sre_A PON1, serum paraoxonase 98.0 0.0018 6.2E-08 48.4 21.6 183 17-205 52-285 (355)
305 2vpj_A Kelch-like protein 12; 98.0 0.0016 5.4E-08 47.4 20.2 189 25-217 14-233 (301)
306 3kya_A Putative phosphatase; s 98.0 0.0029 9.8E-08 49.4 23.2 202 16-219 187-479 (496)
307 3ii7_A Kelch-like protein 7; p 97.9 0.0032 1.1E-07 45.9 19.8 184 27-217 13-227 (306)
308 2xn4_A Kelch-like protein 2; s 97.9 0.0036 1.2E-07 45.6 18.0 184 26-217 16-231 (302)
309 2uvk_A YJHT; unknown function, 97.8 0.0023 8E-08 47.8 16.6 191 25-220 65-347 (357)
310 1tl2_A L10, protein (tachylect 97.8 0.0031 1.1E-07 43.5 15.7 179 26-213 4-206 (236)
311 3ott_A Two-component system se 97.8 0.01 3.6E-07 49.1 21.4 192 15-218 63-263 (758)
312 1zgk_A Kelch-like ECH-associat 97.8 0.0048 1.6E-07 45.1 18.1 185 25-217 24-242 (308)
313 4asc_A Kelch repeat and BTB do 97.8 0.0053 1.8E-07 45.0 19.8 149 24-178 44-224 (315)
314 3das_A Putative oxidoreductase 97.8 0.0043 1.5E-07 46.2 16.4 144 59-204 36-219 (347)
315 2ism_A Putative oxidoreductase 97.7 0.0085 2.9E-07 44.8 20.0 185 15-205 75-333 (352)
316 3a9g_A Putative uncharacterize 97.7 0.002 6.9E-08 48.3 13.7 141 59-205 33-216 (354)
317 2ism_A Putative oxidoreductase 97.7 0.009 3.1E-07 44.7 19.7 100 16-118 32-152 (352)
318 1tl2_A L10, protein (tachylect 97.7 0.0029 9.8E-08 43.6 13.1 146 15-168 41-203 (236)
319 3s94_A LRP-6, low-density lipo 97.7 0.015 5E-07 47.1 24.7 192 16-215 350-551 (619)
320 3pbp_A Nucleoporin NUP82; beta 97.7 0.011 3.7E-07 45.0 18.5 136 63-203 29-196 (452)
321 1cru_A Protein (soluble quinop 97.6 0.0049 1.7E-07 47.8 15.2 103 59-163 31-162 (454)
322 2woz_A Kelch repeat and BTB do 97.6 0.012 4E-07 43.2 19.4 149 24-178 55-234 (318)
323 2g8s_A Glucose/sorbosone dehyd 97.5 0.0074 2.5E-07 45.2 15.0 144 59-204 22-215 (353)
324 1cru_A Protein (soluble quinop 97.5 0.01 3.4E-07 46.1 15.7 105 15-119 27-162 (454)
325 3s25_A Hypothetical 7-bladed b 97.5 0.015 5.1E-07 42.5 17.9 180 20-222 58-262 (302)
326 3das_A Putative oxidoreductase 97.5 0.018 6.2E-07 42.9 16.4 145 15-162 32-219 (347)
327 2be1_A Serine/threonine-protei 97.4 0.00034 1.2E-08 51.8 6.1 113 27-141 11-140 (339)
328 2zwa_A Leucine carboxyl methyl 97.3 0.027 9.1E-07 46.3 16.4 180 25-205 451-673 (695)
329 2zwa_A Leucine carboxyl methyl 97.2 0.062 2.1E-06 44.2 19.9 191 24-217 396-637 (695)
330 2xzh_A Clathrin heavy chain 1; 97.2 0.035 1.2E-06 40.9 25.3 173 20-196 72-311 (365)
331 3a9g_A Putative uncharacterize 97.1 0.055 1.9E-06 40.5 22.4 187 15-205 73-330 (354)
332 2uvk_A YJHT; unknown function, 97.0 0.058 2E-06 40.2 17.9 145 25-173 19-224 (357)
333 1bpo_A Protein (clathrin); cla 97.0 0.069 2.4E-06 41.0 25.3 174 20-197 71-311 (494)
334 3s25_A Hypothetical 7-bladed b 97.0 0.053 1.8E-06 39.6 21.3 177 22-221 21-222 (302)
335 2woz_A Kelch repeat and BTB do 97.0 0.055 1.9E-06 39.6 18.2 181 28-217 18-233 (318)
336 4asc_A Kelch repeat and BTB do 97.0 0.056 1.9E-06 39.5 19.5 181 28-217 7-223 (315)
337 2xbg_A YCF48-like protein; pho 97.0 0.062 2.1E-06 39.7 23.5 186 14-211 35-230 (327)
338 3ei3_A DNA damage-binding prot 96.9 0.17 6E-06 44.1 21.8 93 123-217 808-915 (1158)
339 2xzh_A Clathrin heavy chain 1; 96.6 0.13 4.5E-06 37.9 17.4 161 15-178 152-335 (365)
340 1xi4_A Clathrin heavy chain; a 96.5 0.33 1.1E-05 43.1 17.0 104 22-129 73-186 (1630)
341 3sbq_A Nitrous-oxide reductase 96.2 0.089 3E-06 41.7 11.3 103 101-205 323-453 (638)
342 1bpo_A Protein (clathrin); cla 96.1 0.35 1.2E-05 37.2 18.3 161 15-178 151-334 (494)
343 3sbq_A Nitrous-oxide reductase 96.0 0.42 1.5E-05 38.0 18.7 181 29-215 73-354 (638)
344 3ei3_A DNA damage-binding prot 95.7 1 3.5E-05 39.4 24.9 193 14-212 553-762 (1158)
345 2g8s_A Glucose/sorbosone dehyd 95.4 0.57 1.9E-05 34.9 22.7 68 146-213 272-350 (353)
346 2wg3_C Hedgehog-interacting pr 95.3 0.71 2.4E-05 35.9 13.2 106 59-164 18-158 (463)
347 2be1_A Serine/threonine-protei 95.0 0.06 2.1E-06 39.9 6.2 110 67-183 11-138 (339)
348 3ott_A Two-component system se 94.9 1.4 4.8E-05 36.5 22.1 198 15-221 324-551 (758)
349 3q6k_A 43.2 kDa salivary prote 94.7 0.97 3.3E-05 34.1 16.4 169 37-205 124-342 (381)
350 1xi4_A Clathrin heavy chain; a 94.0 2.3 7.9E-05 38.1 14.1 169 5-176 137-332 (1630)
351 3qhy_B Beta-lactamase inhibito 93.9 1.2 4.3E-05 31.9 16.1 183 16-215 64-246 (282)
352 2wg3_C Hedgehog-interacting pr 93.8 1.9 6.5E-05 33.6 12.8 106 15-120 14-158 (463)
353 4gq2_M Nucleoporin NUP120; bet 92.5 1.1 3.8E-05 38.4 10.1 38 16-53 237-274 (950)
354 3qhy_B Beta-lactamase inhibito 91.3 3 0.0001 29.9 16.3 183 16-215 25-207 (282)
355 3kci_A Probable E3 ubiquitin-p 91.0 4 0.00014 30.8 20.2 186 26-214 62-292 (389)
356 4fhn_B Nucleoporin NUP120; pro 89.8 1.7 5.7E-05 38.1 8.7 38 145-182 238-275 (1139)
357 3zwu_A Alkaline phosphatase PH 88.0 2.4 8.3E-05 34.1 7.8 58 147-204 478-548 (592)
358 4fhn_B Nucleoporin NUP120; pro 86.4 17 0.00057 32.0 13.0 39 102-140 239-277 (1139)
359 4hvt_A Ritya.17583.B, post-pro 86.2 13 0.00045 30.7 18.1 193 17-216 131-382 (711)
360 3uc1_A DNA gyrase subunit A; D 85.4 9.2 0.00032 28.2 20.7 161 14-175 94-279 (327)
361 3zwu_A Alkaline phosphatase PH 85.1 4.9 0.00017 32.4 8.2 59 103-162 478-548 (592)
362 1suu_A DNA gyrase subunit A; t 84.8 9.5 0.00033 27.8 19.0 188 24-214 6-230 (312)
363 3f7f_A Nucleoporin NUP120; nuc 84.6 5.5 0.00019 32.9 8.3 29 155-183 230-258 (729)
364 4a9v_A PHOX; hydrolase, beta-p 83.9 7 0.00024 31.4 8.4 60 146-205 477-549 (592)
365 3f7f_A Nucleoporin NUP120; nuc 83.4 2.4 8.3E-05 34.9 5.8 37 16-54 223-259 (729)
366 4a9v_A PHOX; hydrolase, beta-p 83.2 9 0.00031 30.7 8.7 60 102-162 477-548 (592)
367 4gq2_M Nucleoporin NUP120; bet 81.1 26 0.00089 30.2 18.2 39 102-140 237-275 (950)
368 3b7f_A Glycosyl hydrolase, BNR 79.9 17 0.00058 27.3 18.6 27 102-128 116-144 (394)
369 3kci_A Probable E3 ubiquitin-p 78.0 20 0.00067 27.0 21.1 196 17-214 107-344 (389)
370 3al9_A Plexin-A2; beta-propell 75.6 13 0.00044 29.7 7.6 68 103-170 402-476 (539)
371 1q47_A Semaphorin 3A; beta pro 74.3 16 0.00054 28.8 7.7 69 102-170 405-487 (495)
372 3no0_A DNA gyrase subunit A; D 68.5 29 0.001 24.7 20.6 157 14-175 67-246 (276)
373 1q47_A Semaphorin 3A; beta pro 63.8 39 0.0013 26.6 7.9 60 67-126 422-487 (495)
374 3nvq_A Semaphorin-7A; beta-pro 63.7 39 0.0013 27.3 7.9 57 114-170 382-444 (590)
375 4gz8_A Semaphorin-3A; multi-do 63.1 31 0.0011 28.4 7.4 57 114-170 431-495 (667)
376 3b7f_A Glycosyl hydrolase, BNR 61.2 49 0.0017 24.7 16.7 175 15-195 177-391 (394)
377 3uc1_A DNA gyrase subunit A; D 58.9 51 0.0018 24.2 16.3 115 16-130 147-278 (327)
378 1zi0_A DNA gyrase subunit A; b 57.3 52 0.0018 23.9 21.2 187 24-213 1-224 (307)
379 4d9s_A UVB-resistance protein 56.9 61 0.0021 24.5 23.5 199 10-214 11-252 (406)
380 4gz8_A Semaphorin-3A; multi-do 56.8 50 0.0017 27.2 7.6 60 67-126 430-495 (667)
381 3ol2_B Plexin-B1; beta-propell 54.9 49 0.0017 26.3 7.1 68 102-170 388-461 (528)
382 1olz_A Semaphorin 4D; developm 53.0 52 0.0018 27.1 7.2 60 67-126 416-477 (663)
383 3nvq_A Semaphorin-7A; beta-pro 52.2 51 0.0018 26.6 6.9 60 67-126 381-444 (590)
384 3al9_A Plexin-A2; beta-propell 51.2 32 0.0011 27.4 5.6 61 66-126 413-476 (539)
385 3no0_A DNA gyrase subunit A; D 50.4 66 0.0023 22.9 22.7 164 8-174 14-195 (276)
386 3ol2_B Plexin-B1; beta-propell 50.2 87 0.003 25.0 7.8 59 67-126 401-461 (528)
387 3oky_A Plexin-A2; transmembran 50.0 70 0.0024 26.5 7.4 58 113-170 413-475 (681)
388 1zvt_A Topoisomerase IV subuni 45.7 76 0.0026 22.3 14.4 146 28-175 4-163 (256)
389 1olz_A Semaphorin 4D; developm 45.0 1.2E+02 0.004 25.1 8.0 57 114-170 417-477 (663)
390 1zvt_A Topoisomerase IV subuni 40.2 94 0.0032 21.8 15.2 142 67-214 3-162 (256)
391 3d8d_A Amyloid beta A4 precurs 39.6 73 0.0025 20.3 6.3 51 26-76 54-107 (148)
392 3mvd_K Regulator of chromosome 38.6 1.3E+02 0.0043 22.8 25.3 193 16-215 128-374 (423)
393 1zi0_A DNA gyrase subunit A; b 38.4 1.1E+02 0.0038 22.1 20.7 160 15-175 95-277 (307)
394 1suu_A DNA gyrase subunit A; t 36.8 1.2E+02 0.0041 22.0 21.3 114 16-130 101-230 (312)
395 2zux_A YESW protein; beta-prop 35.9 1.7E+02 0.006 23.6 17.2 56 142-197 361-424 (591)
396 3q6k_A 43.2 kDa salivary prote 35.7 1.4E+02 0.0048 22.6 19.6 148 15-162 152-341 (381)
397 4hvt_A Ritya.17583.B, post-pro 32.0 2.2E+02 0.0076 23.7 20.0 94 120-214 318-429 (711)
398 3c12_A FLGD, flagellar protein 30.3 60 0.0021 20.2 3.5 26 185-210 105-131 (138)
399 1sqj_A OXG-RCBH, oligoxylogluc 29.4 2.5E+02 0.0087 23.6 18.2 29 14-42 14-43 (789)
400 3oky_B Putative uncharacterize 28.3 2.4E+02 0.008 22.8 8.6 69 102-170 404-495 (565)
401 1ukf_A Avirulence protein AVRP 28.0 86 0.0029 20.9 3.9 36 13-48 117-153 (188)
402 4d9s_A UVB-resistance protein 28.0 1.9E+02 0.0066 21.7 22.6 193 16-214 122-356 (406)
403 3oky_B Putative uncharacterize 25.3 2.4E+02 0.0083 22.7 6.7 27 100-126 469-495 (565)
404 3oky_A Plexin-A2; transmembran 24.6 1.8E+02 0.0062 24.1 6.1 61 66-126 412-475 (681)
405 4h3o_A Lectin; cadmium, plant 23.5 1.2E+02 0.004 17.7 12.7 46 149-204 54-99 (105)
406 3mez_A Mannose-specific lectin 22.7 1.3E+02 0.0044 17.8 9.7 56 149-214 53-108 (111)
407 1a12_A RCC1, regulator of chro 22.6 2.5E+02 0.0085 21.1 20.1 184 20-211 62-310 (413)
408 3l6v_A GYRA, DNA gyrase subuni 22.0 2.5E+02 0.0087 21.0 21.1 158 15-173 99-314 (370)
409 1sr4_A CDT A, cytolethal diste 20.8 2.1E+02 0.0071 19.5 4.8 56 121-182 68-124 (206)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=250.62 Aligned_cols=207 Identities=18% Similarity=0.270 Sum_probs=188.0
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
++++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++....+..+...+ ++|+|++++|++++.||.|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~ 189 (321)
T 3ow8_A 110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 189 (321)
T ss_dssp TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEE
Confidence 4667778888999999999999999999999999999999999998888887766544 99999999999999999999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEE
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV 159 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 159 (235)
+||+++++. ...+.+|..+|.+++|+|++++|++++.|+.|++||+++++....+. .|...|.+++|+|++++|
T Consensus 190 iwd~~~~~~----~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 190 IFDIATGKL----LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS--GHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp EEETTTTEE----EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEE
T ss_pred EEECCCCcE----EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc--CCCCceEEEEECCCCCEE
Confidence 999987653 56677899999999999999999999999999999999988776554 556779999999999999
Q ss_pred EEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 160 VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 160 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
++++.|+.|++||+++++++..+.+|...|.+++|+|++.+|++++ +.|++||..
T Consensus 264 ~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999998 789999963
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=247.86 Aligned_cols=205 Identities=22% Similarity=0.341 Sum_probs=186.4
Q ss_pred hhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEEecCCeEEEEecc
Q 026679 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 7 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
...+++|...|.+++|++++..+++++.|++|++||+.+++.+..+..+... .++|+|++++|++++.+|.+++||++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC
Confidence 3457899999999999999999999999999999999999998888776644 49999999999999999999999998
Q ss_pred CCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC
Q 026679 85 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 164 (235)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 164 (235)
+.+. ...+..+...+.+++|+|++++|++++.|+.|++||+++++.+..+. .|..+|.+++|+|++++|++++.
T Consensus 153 ~~~~----~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 153 SGKK----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE--GHAMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp TCSE----EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCCCEEEECTTSCEEEEECT
T ss_pred CCce----eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc--ccCCceeEEEEcCCCCEEEEEcC
Confidence 7664 55666788899999999999999999999999999999998877655 45567999999999999999999
Q ss_pred CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 165 DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 165 dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++ +.+++||+.+..
T Consensus 227 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 227 DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 99999999999999999999999999999999999999998 789999997654
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-40 Score=246.34 Aligned_cols=213 Identities=14% Similarity=0.171 Sum_probs=188.4
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
++++.++.+++|..+|.+++|+|++++|++|+.|++|++||+++++.+..+..|...+ ++|+|++.+|++|+.|+.|+
T Consensus 43 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~ 122 (304)
T 2ynn_A 43 ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (304)
T ss_dssp TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred CCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEE
Confidence 4567778889999999999999999999999999999999999999999998887655 99999999999999999999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEcc-CCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC--CC
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP--DG 156 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 156 (235)
+||+++... ....+.+|...|.+++|+| ++..|++++.|+.|++||++.+.....+.. .+...+..+.|+| ++
T Consensus 123 lWd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 123 LWNWENNWA---LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDK 198 (304)
T ss_dssp EEEGGGTTE---EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC-CCTTCEEEEEECCSTTC
T ss_pred EEECCCCcc---hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc-CCcCcEEEEEEEEcCCC
Confidence 999987532 2455778999999999999 678999999999999999988776554442 3445688888887 77
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.+|++++ +.|++||+++.+.
T Consensus 199 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce
Confidence 8999999999999999999999999999999999999999999999998 8899999987654
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-41 Score=256.43 Aligned_cols=211 Identities=17% Similarity=0.264 Sum_probs=191.4
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
+++++++.+++|.+.|++++|+|++++|++|+.|++|++||+.+++++..+..|...+ ++|+|+++.+++++.|+.|+
T Consensus 138 ~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 138 ETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp TTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 4677888899999999999999999999999999999999999999988888877554 99999999999999999999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC----
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD---- 155 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~---- 155 (235)
+||++++.. ...+.+|...|.++.++|++.+|++++.|+.|++||+++++....+. .|...|.+++|+|+
T Consensus 218 ~wd~~~~~~----~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 218 MWEVQTGYC----VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR--EHRHVVECISWAPESSYS 291 (410)
T ss_dssp EEETTTCCE----EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECCSCGGG
T ss_pred EEECCCCcE----EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec--CCCceEEEEEEcCccccc
Confidence 999988664 55677899999999999999999999999999999999988776654 45567999999996
Q ss_pred ----------------CcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 156 ----------------GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 156 ----------------~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.+|++++ +.|++||+....
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 371 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 67899999999999999999999999999999999999999999999998 779999997654
Q ss_pred C
Q 026679 218 N 218 (235)
Q Consensus 218 ~ 218 (235)
.
T Consensus 372 ~ 372 (410)
T 1vyh_C 372 C 372 (410)
T ss_dssp C
T ss_pred e
Confidence 4
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.7e-40 Score=247.33 Aligned_cols=209 Identities=15% Similarity=0.265 Sum_probs=187.1
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
..+.+++|.+.|++++|+|++++|++|+.||+|++||+.+++....+..+...+ ++|+|+++++++++.|+.+++|++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 345688999999999999999999999999999999999999888888777554 899999999999999999999999
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
.+..........+.+|...|.++.|++++. +++++.|+.|++||+++++....+. .|...|.+++|+|++++|++|+
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFT--GHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEE
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEc--CCCCceEEEEECCCCCEEEEEe
Confidence 876543334556778999999999998875 8999999999999999998876654 4557799999999999999999
Q ss_pred CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 164 GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
.|+.|++||+++++.+..+.+|...|.+++|+|++.+|++++ +.+++||++...
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 999999999999999999999999999999999999999998 789999997643
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=249.23 Aligned_cols=203 Identities=15% Similarity=0.202 Sum_probs=168.6
Q ss_pred hcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCC-CEEEEEecCCeEEEEeccCC
Q 026679 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQG-LVFAVAMEAGAIKLFDSRSY 86 (235)
Q Consensus 10 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~-~~l~~~~~dg~v~i~d~~~~ 86 (235)
+.+|.+.|++++|+|++++|++|+.|++|++||+++++.+..+..|...+ ++|+|++ .+|++++.|+.|++||++++
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc
Confidence 34899999999999999999999999999999999999999999887655 8999987 57899999999999999987
Q ss_pred CCCCceeEeecCCCcceeEEEEccC-CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC-cEEEEeCC
Q 026679 87 DKGPFDTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG-QYVVSGSG 164 (235)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~ 164 (235)
+. ........+...+.+++|+|+ +++|++++.|+.|++||+++++.+..+.. |...|++++|+|++ ++|++|+.
T Consensus 203 ~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~--h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 203 KP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV--HSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp SC--EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC--CSSCEEEEEECSSSSCCEEEEET
T ss_pred ce--eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC--CCCCEEEEEEccCCCeEEEEEeC
Confidence 64 122223445667899999995 56788899999999999999988876654 55679999999997 57999999
Q ss_pred CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCE-EEEcc--cceEEeeCCCCC
Q 026679 165 DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM-FVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 165 dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~--~~i~iw~~~~~~ 217 (235)
|+.|++||+++++.+ .+.+|.+.|++++|+|++.. |++++ +.|++|++....
T Consensus 279 D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 279 DCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp TSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999999888754 56889999999999999865 55666 889999997653
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-40 Score=248.14 Aligned_cols=202 Identities=16% Similarity=0.261 Sum_probs=183.1
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
....+.+|.+.|.++.|++++ .+++++.|++|++||+++++....+..|...+ ++|+|+++++++|+.|+.|++||+
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 445678999999999999876 48999999999999999999999988877554 899999999999999999999999
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
++... ...+.+|...|.+++|+|++++|++++.|+.|++||+++++....+....+...|.+++|+|+|++|++|+
T Consensus 214 ~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 289 (340)
T 1got_B 214 REGMC----RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289 (340)
T ss_dssp TTCSE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCee----EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEEC
Confidence 87654 56677899999999999999999999999999999999988877666555556799999999999999999
Q ss_pred CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEee
Q 026679 164 GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 212 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~ 212 (235)
.||.|++||+.+++.+..+.+|..+|.+++|+|++.+|++++ +.|++|+
T Consensus 290 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 290 DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999999999999999998 7899996
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-40 Score=254.49 Aligned_cols=207 Identities=18% Similarity=0.294 Sum_probs=187.2
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
.++++++.+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+..|...+ +.++|++.++++++.|+.|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 3556778899999999999999999999999999999999999999999998887554 88999999999999999999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEccC--------------------CCeEEEecCCCcEEEEEcCCCceeeeec
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND--------------------GKSMLLTTTNNNIYVLDAYGGEKRCGFS 139 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 139 (235)
+||+.+.+. ...+..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+.
T Consensus 260 vwd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 260 VWVVATKEC----KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp EEETTTCCE----EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCce----eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 999987654 5667789999999999996 6689999999999999999998887665
Q ss_pred cCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 140 LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 140 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
. |...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|...|++++|+|++.+|++++ +.|++|+++
T Consensus 336 ~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 336 G--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp C--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred C--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 4 556799999999999999999999999999999999999999999999999999999999998 889999863
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=7.7e-40 Score=246.85 Aligned_cols=203 Identities=15% Similarity=0.249 Sum_probs=183.2
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcC--CCCEEEEEecCCeEEEE
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQ--QGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~--~~~~l~~~~~dg~v~i~ 81 (235)
....+.+|.+.|.+++|+|++..|++++.|++|++||+++++.+..+..|...+ ++++| +++.|++|+.||.|++|
T Consensus 146 ~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 146 KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 345567899999999999999999999999999999999999999998887654 67777 57899999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 161 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (235)
|+++++. ...+..|...|.+++|+|++++|++++.|+.|++||++.++....+..+.+...+.+++|+|++++|++
T Consensus 226 d~~~~~~----~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~ 301 (354)
T 2pbi_B 226 DMRSGQC----VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA 301 (354)
T ss_dssp ETTTCCE----EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred ECCCCcE----EEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE
Confidence 9998664 566778999999999999999999999999999999999887776665555556899999999999999
Q ss_pred eCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEee
Q 026679 162 GSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 212 (235)
Q Consensus 162 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~ 212 (235)
|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++++ +.+++|+
T Consensus 302 g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 302 GYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999999999999999998 7899995
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.7e-40 Score=242.38 Aligned_cols=208 Identities=15% Similarity=0.214 Sum_probs=181.6
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
++.+.|++|.+.|++++|+|++++|++++.||+|++||++++..+..+..+...+ ++|+|++++|++|+.|+.|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 4567789999999999999999999999999999999999999999888877654 89999999999999999999999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC-CCcEEEE
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVVS 161 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~ 161 (235)
+.+++. ...+.+|...|.+++|+|++++|++++.|+.|++||++++.... .....|...|.+++|+| ++.+|++
T Consensus 84 ~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 84 YNTGEK----VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE-QTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp TTTCCE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE-EEECCCCSCEEEEEECTTCTTEEEE
T ss_pred CCCCcE----EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh-hhhcccCCcEEEEEECCCCCCEEEE
Confidence 988764 66677899999999999999999999999999999998774432 23345667799999999 6889999
Q ss_pred eCCCCcEEEEEcCCCceeeeec-CCCcceeEEEeec--CCCEEEEcc--cceEEeeCCCCC
Q 026679 162 GSGDGTLHAWNINTRNEVACWN-GNIGVVACLKWAP--RRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 162 ~~~dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
|+.|+.|++||++++.....+. +|...+..+.|+| ++.+|++++ +.|++||++...
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE
T ss_pred EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc
Confidence 9999999999998887766554 4567899999987 778999998 889999997654
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.3e-40 Score=245.42 Aligned_cols=204 Identities=16% Similarity=0.133 Sum_probs=172.0
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeee----eccCCc--eEEEcCCCCEEEEEecCCeEEEEeccC
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL----RLRGRP--TVAFDQQGLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~~~~--~~~~~~~~~~l~~~~~dg~v~i~d~~~ 85 (235)
.|...|.+++|+|++ .|++|+.||+|++||+++++..... ..|... +++|+|++++|++|+.|+.|++||+++
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 356789999999985 7889999999999999988765443 345544 499999999999999999999999988
Q ss_pred CCCCCceeEeecCCCcceeEEEEccCCC-eEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC-CCcEEEEeC
Q 026679 86 YDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVVSGS 163 (235)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~ 163 (235)
++. ...+.+|...|.+++|+|++. .|++++.|+.|++||+++++....+....+...+.+++|+| ++++|++|+
T Consensus 159 ~~~----~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 159 QVV----LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp TEE----EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred CcE----EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 654 667789999999999999885 67899999999999999999888776666667799999999 567889999
Q ss_pred CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCC-CEEEEcc--cceEEeeCCCCCCCC
Q 026679 164 GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR-AMFVAAS--SVLSFWIPNPSSNST 220 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~~i~iw~~~~~~~~~ 220 (235)
.||.|++||+++++++..+.+|...|++++|+|++ ++|++++ +.|+|||+++.+...
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 99999999999999999999999999999999998 5788887 889999998775543
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.3e-39 Score=242.28 Aligned_cols=209 Identities=16% Similarity=0.221 Sum_probs=183.7
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCC--ceEEEcCCCCEEEEEecCCeEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
..+.+++|.+.|++++|+|++++|++|+.|++|++||..+++....+..+.. ..++|+|++..+++++.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 4567889999999999999999999999999999999998888877776654 44999999999999999999999998
Q ss_pred cCCCCC--CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC--CCcEE
Q 026679 84 RSYDKG--PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP--DGQYV 159 (235)
Q Consensus 84 ~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l 159 (235)
...... ......+..|...|.+++|+|++..|++++.|+.|++||+++++.+..+.. |...+.+++|+| ++++|
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECCCSSCCEE
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC--CCCCeEEEEEEeCCCCCEE
Confidence 754321 122345567899999999999999999999999999999999998877664 446699999987 57899
Q ss_pred EEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 160 VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 160 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
++|+.||.|++||+++++.+..+.+|...|.+++|+|++.+|++++ +.+++||+...
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999999999999999999999999999999999999998 88999999764
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=243.34 Aligned_cols=209 Identities=17% Similarity=0.219 Sum_probs=177.1
Q ss_pred hhhhhhhccccc-ceeEEEeecCCCeeEEEeccceEEEEecCcceeeee---eeccCCc--eEEEcCCCCEEEEEecCCe
Q 026679 4 NRILRYFKGHKE-RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGI---LRLRGRP--TVAFDQQGLVFAVAMEAGA 77 (235)
Q Consensus 4 ~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~---~~~~~~~--~~~~~~~~~~l~~~~~dg~ 77 (235)
.+++..+++|.. .|++++|+|+|++|++|+.|++|++||+.++..... ...|... .++|+|++++|++++.|+.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 356778899988 999999999999999999999999999987754322 2345444 4999999999999999999
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceee-eeccCCCCCcceeeEEeCCC
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRC-GFSLEPSPNTNTEATFTPDG 156 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~~~i~~~~~~~~~ 156 (235)
+++||+..... .....+.+|...|.+++|+|++++|++++.|+.|++||++.+.... ......|...|.+++|+|++
T Consensus 85 v~iw~~~~~~~--~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 85 TCIWKKNQDDF--ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp EEEEEECCC-E--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSS
T ss_pred EEEEEccCCCe--EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCC
Confidence 99999876532 1245677899999999999999999999999999999998764322 23345666789999999999
Q ss_pred cEEEEeCCCCcEEEEEcCCCc--eeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRN--EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
++|++++.|+.|++||.++++ ....+.+|...|.+++|+|++++|++++ +.+++|+..
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 999999999999999998775 4467889999999999999999999998 789999863
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.3e-39 Score=236.81 Aligned_cols=207 Identities=14% Similarity=0.285 Sum_probs=175.0
Q ss_pred hhhcccccceeEEEeecCCCeeEEEeccceEEEEecCc--ceeeeeeeccCCce--EEEcC--CCCEEEEEecCCeEEEE
Q 026679 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRV--NACQGILRLRGRPT--VAFDQ--QGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~--~~~~~~~~~~~~~~--~~~~~--~~~~l~~~~~dg~v~i~ 81 (235)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+.. .+.+..+..|...+ ++|++ ++++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45789999999999999999999999999999999974 36677888887665 88876 48999999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccC--CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC----
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD---- 155 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~---- 155 (235)
|++++.... ...+..|...|.+++|+|+ +.+|++++.|+.|++||++++..........|...+.+++|+|+
T Consensus 83 d~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 83 KEENGRWSQ--IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EBSSSCBCC--CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred EcCCCceEE--EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 998754222 3445678899999999997 88999999999999999987643322334566678999999997
Q ss_pred ---------CcEEEEeCCCCcEEEEEcCCCc----eeeeecCCCcceeEEEeecCC---CEEEEcc--cceEEeeCCCC
Q 026679 156 ---------GQYVVSGSGDGTLHAWNINTRN----EVACWNGNIGVVACLKWAPRR---AMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 156 ---------~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~l~~~~--~~i~iw~~~~~ 216 (235)
+++|++|+.|+.|++||+++++ ....+.+|...|.+++|+|++ .+|++++ +.+++|+++..
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 5799999999999999998766 566788999999999999985 7899887 78999998764
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.7e-39 Score=239.34 Aligned_cols=206 Identities=17% Similarity=0.236 Sum_probs=179.3
Q ss_pred hhhhhhcccccceeEEEeecCC-CeeEEEeccceEEEEecCc-----ceeeeeeeccCCce--EEEcCCCCEEEEEecCC
Q 026679 5 RILRYFKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRV-----NACQGILRLRGRPT--VAFDQQGLVFAVAMEAG 76 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~-----~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg 76 (235)
.+..+|++|.+.|++++|+|++ ++|++|+.|++|++|++.. +.++..+..|...+ ++|+|++++|++++.|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~ 87 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK 87 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC
Confidence 4556789999999999999965 8999999999999999864 23466777777655 89999999999999999
Q ss_pred eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC-
Q 026679 77 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD- 155 (235)
Q Consensus 77 ~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~- 155 (235)
.|++||+++++. ...+.+|...|.+++|+|++.+|++++.|+.|++||++.. .... ...|...+.++.|+|.
T Consensus 88 ~v~~wd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~--~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 88 TLRLWDVATGET----YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLAT--LLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp EEEEEETTTTEE----EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEE--ECCCSSCEEEEEECCC-
T ss_pred EEEEEECCCCCe----eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEE--EeccCCcEEEEEEccCC
Confidence 999999988654 5667789999999999999999999999999999999644 3433 3456677999999985
Q ss_pred -----CcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 156 -----GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 156 -----~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+..|++++.|+.|++||+++++....+.+|...|.+++|+|++.+|++++ +.+++||+...+
T Consensus 161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 44899999999999999999999999999999999999999999999998 789999997654
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-38 Score=235.69 Aligned_cols=206 Identities=18% Similarity=0.279 Sum_probs=183.9
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
+...+.+|.+.|++++|+|++++|++++.||.|++|++.+++....+..|...+ ++|+|++++|++++.|+.|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 455678999999999999999999999999999999999999888888777554 999999999999999999999999
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
++.+. ...+..|...|.+++|+|++++|++++.|+.|++||+++++....+. .|..++.+++|+|++++|++++
T Consensus 95 ~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 95 SSGKC----LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp TTCCE----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcE----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec--CCCCcEEEEEEcCCCCEEEEEe
Confidence 87654 56677899999999999999999999999999999999988776655 4556799999999999999999
Q ss_pred CCCcEEEEEcCCCceeeeec-CCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 164 GDGTLHAWNINTRNEVACWN-GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
.||.|++||+++++.+..+. .+..++..++|+|++++|++++ +.+++||+....
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK 225 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999999999998877664 4566899999999999999997 789999997654
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-38 Score=238.73 Aligned_cols=205 Identities=20% Similarity=0.250 Sum_probs=176.4
Q ss_pred hhhhhhcccccceeEEEe-----ec-CCCeeEEEeccceEEEEecCcc-------eeeeeeeccCCce--EEEcCCCCEE
Q 026679 5 RILRYFKGHKERVISLCM-----SP-VNDSFMSGSLDHSVRIWDLRVN-------ACQGILRLRGRPT--VAFDQQGLVF 69 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~-----~~-~~~~l~s~~~d~~i~vwd~~~~-------~~~~~~~~~~~~~--~~~~~~~~~l 69 (235)
++...+++|.+.|++++| ++ ++++|++|+.|++|++||+... .....+..|...+ ++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 345678999999999999 76 8899999999999999998753 3455666776554 8999999999
Q ss_pred EEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCccee
Q 026679 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE 149 (235)
Q Consensus 70 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~ 149 (235)
++++.|+.|++||+++++. ...+.+|...|.+++|+|++++|++++.|+.|++||+.............|...+.+
T Consensus 92 ~s~s~D~~v~lwd~~~~~~----~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTT----YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp EEEETTSEEEEEETTSSCE----EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred EEEcCCCcEEEEECCCCcE----EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 9999999999999988654 566778999999999999999999999999999999985444333333456778999
Q ss_pred eEEeCCC----------cEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 150 ATFTPDG----------QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 150 ~~~~~~~----------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
++|+|++ .+|++++.||.|++|| .+.+....+.+|...|.+++|+|++++|++++ +.+++||+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999987 7999999999999999 45677778889999999999999999999998 789999994
No 18
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.1e-39 Score=241.78 Aligned_cols=201 Identities=15% Similarity=0.187 Sum_probs=172.7
Q ss_pred cccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCC-EEEEEecCCeEEEEeccCCC
Q 026679 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGL-VFAVAMEAGAIKLFDSRSYD 87 (235)
Q Consensus 11 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~-~l~~~~~dg~v~i~d~~~~~ 87 (235)
.+|.+.|++++|+|++++|++|+.|++|++||+++++.+..+..|...+ ++|+|++. ++++++.||.|++||+++++
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 4799999999999999999999999999999999999999998877655 89999874 78999999999999998866
Q ss_pred CCCceeEeecCCCcceeEEEEccCC-CeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC-cEEEEeCCC
Q 026679 88 KGPFDTFLVGGDTAEVCDIKFSNDG-KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG-QYVVSGSGD 165 (235)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d 165 (235)
. ........+...+.+++|+|++ .+|++++.|+.|++||+++++....+. .+...|++++|+|++ ++|++|+.|
T Consensus 216 ~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~--~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 216 P--ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA--VHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp C--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC--CCSSCEEEEEECSSSSCCEEEEETT
T ss_pred e--eeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe--ccceeEEEEEEcCCCCCEEEEEeCC
Confidence 4 2233345667789999999974 578889999999999999998877665 455679999999987 578999999
Q ss_pred CcEEEEEcCCCceeeeecCCCcceeEEEeec-CCCEEEEcc--cceEEeeCCCC
Q 026679 166 GTLHAWNINTRNEVACWNGNIGVVACLKWAP-RRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 166 g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~~i~iw~~~~~ 216 (235)
+.|+|||+++++.+..+ +|...|++++|+| ++.+|++++ +.|++|++...
T Consensus 292 ~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 292 CTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999998877655 6999999999999 789999987 88999998653
No 19
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.8e-39 Score=244.74 Aligned_cols=213 Identities=18% Similarity=0.271 Sum_probs=183.9
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
.+.+.+++|.+.|++++|+|++++|++|+.|++|++||+.+++....+..|...+ ++|+|++++|++|+.|+.+++||
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 3456789999999999999999999999999999999999999998888877544 89999999999999999999999
Q ss_pred ccCCCC---CCceeEeecCCCcceeEEEEccC-CCeEEEecCCCcEEEEEcCCCceeeeecc---CCCCCcceeeEEeC-
Q 026679 83 SRSYDK---GPFDTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFSL---EPSPNTNTEATFTP- 154 (235)
Q Consensus 83 ~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~---~~~~~~i~~~~~~~- 154 (235)
+..... .......+.+|...+.++.|.|+ +..|++++.|+.|++||+++++.+..+.. ..|...+.+++|+|
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence 975321 11123446689999999999996 45699999999999999999988766532 35667799999987
Q ss_pred CCcEEEEeCCCCcEEEEEcC-CCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 155 DGQYVVSGSGDGTLHAWNIN-TRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 155 ~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
++++|++|+.|+.|++||++ .++.+..+.+|...|.+++|+|++.+|++++ +.+++||+.+..
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 88999999999999999998 5577888999999999999999999999998 889999998653
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-38 Score=236.08 Aligned_cols=213 Identities=17% Similarity=0.270 Sum_probs=169.5
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcc--eeeeee-ec-cCCc--eEEEcCCCCEEEEEecC
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVN--ACQGIL-RL-RGRP--TVAFDQQGLVFAVAMEA 75 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~-~~-~~~~--~~~~~~~~~~l~~~~~d 75 (235)
.+.++++.+++|.++|++++|+|+ +|++|+.|++|++||+..+ .....+ .. |... .++|+|++++|++++.|
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred cccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 455678889999999999999986 9999999999999999875 344444 22 4443 49999999999999999
Q ss_pred CeEEEEeccCCCC---CCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCC-ce-eeeeccCCCCCcceee
Q 026679 76 GAIKLFDSRSYDK---GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG-EK-RCGFSLEPSPNTNTEA 150 (235)
Q Consensus 76 g~v~i~d~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~-~~~~~~~~~~~~i~~~ 150 (235)
+.|++||+..... .......+.+|...|.+++|+|++++|++++.|+.|++||++.. .. .....+..|...|.++
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 9999999864321 11234556789999999999999999999999999999999543 21 1222345566789999
Q ss_pred EEeCCCcEEEEeCCCCcEEEEEcCCC--ceeeeecCCCcceeEEEeecC--CCEEEEcc--cceEEeeCCCC
Q 026679 151 TFTPDGQYVVSGSGDGTLHAWNINTR--NEVACWNGNIGVVACLKWAPR--RAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 151 ~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~--~~i~iw~~~~~ 216 (235)
+|+|++++|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.+|++++ +.+++|++...
T Consensus 160 ~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 160 IWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 99999999999999999999999776 677888999999999999998 67888887 88999998643
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-38 Score=253.13 Aligned_cols=213 Identities=18% Similarity=0.287 Sum_probs=175.0
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCccee--eeeeec-------------------------
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC--QGILRL------------------------- 54 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~--~~~~~~------------------------- 54 (235)
.+++....+.+|...|++++|+|+|++||+|+.|++|+|||+.+++. ...+..
T Consensus 47 ~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 47 GSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp TCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred CCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC
Confidence 34667778999999999999999999999999999999999864321 112211
Q ss_pred -------------------cCC--ceEEEcCCCC-EEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCC
Q 026679 55 -------------------RGR--PTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG 112 (235)
Q Consensus 55 -------------------~~~--~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 112 (235)
|.. ..++|+|++. .|++++.|+.|++||..+.+. ...+.+|...|.+++|+|++
T Consensus 127 ~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~----~~~l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 127 RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF----KSTFGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE----EEEECCCSSCEEEEEECTTS
T ss_pred ceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE----eeeeccccCceEEEEECCCC
Confidence 221 2377778775 588899999999999765432 55678899999999999999
Q ss_pred CeEEEecCCCcEEEEEcCCCceeeeecc-----CCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceee-------
Q 026679 113 KSMLLTTTNNNIYVLDAYGGEKRCGFSL-----EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA------- 180 (235)
Q Consensus 113 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~------- 180 (235)
++|++++.|+.|++||+.+++....+.. ..|...|.+++|+|++++|++++.|+.|++||+++++.+.
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC
Confidence 9999999999999999999887766532 1577889999999999999999999999999998776543
Q ss_pred ------------------------------------eecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 181 ------------------------------------CWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 181 ------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
.+.+|...|.+++|+|++++|++++ +.+++||+.+...
T Consensus 283 ~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 283 IEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp GGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred ccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 3357888999999999999999998 8899999987644
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.4e-38 Score=232.89 Aligned_cols=204 Identities=17% Similarity=0.284 Sum_probs=181.5
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
..++.+++|...|.+++|+|++++|++|+.|++|++||+++++....+..|...+ ++|+|++.++++++.|+.|++||
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 4567789999999999999999999999999999999999999999998887655 89999999999999999999999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccC------CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSND------GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG 156 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 156 (235)
++.. ....+.+|...|.++.|.|. +..+++++.|+.|++||+++.+....+. .|...|.+++|+|++
T Consensus 136 ~~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 136 IKGQ-----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI--GHNSNINTLTASPDG 208 (319)
T ss_dssp TTSC-----EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEEC--CCCSCEEEEEECTTS
T ss_pred CCCC-----eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeec--CCCCcEEEEEEcCCC
Confidence 9642 25567789999999999985 4489999999999999999888766554 456779999999999
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPS 216 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~ 216 (235)
++|++++.||.|++||+++++.+..+..+ ..|.+++|+|++.++++++ +.+++|+++..
T Consensus 209 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~ 268 (319)
T 3frx_A 209 TLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATGIKVFSLDPQ 268 (319)
T ss_dssp SEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETTEEEEEEETTE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcC
Confidence 99999999999999999999998888754 6899999999999999987 67999998754
No 23
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.3e-38 Score=239.51 Aligned_cols=208 Identities=19% Similarity=0.329 Sum_probs=178.2
Q ss_pred hhhhhcccccceeEEEeecCC-CeeEEEeccceEEEEecCcceeeeee-----eccCCce--EEEcC-CCCEEEEEecCC
Q 026679 6 ILRYFKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGIL-----RLRGRPT--VAFDQ-QGLVFAVAMEAG 76 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~-----~~~~~~~--~~~~~-~~~~l~~~~~dg 76 (235)
..+.+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.+++.+..+ ..|...+ +++++ ++.+|++|+.|+
T Consensus 149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~ 228 (380)
T 3iz6_a 149 VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT 228 (380)
T ss_dssp TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS
T ss_pred ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC
Confidence 345678999999999999975 57999999999999999999888776 3344433 77766 889999999999
Q ss_pred eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCC-----CCcceeeE
Q 026679 77 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPS-----PNTNTEAT 151 (235)
Q Consensus 77 ~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~~~i~~~~ 151 (235)
.|++||++.... ....+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+.. ...+.+++
T Consensus 229 ~v~~wd~~~~~~---~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 229 TVRLWDLRITSR---AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp CEEEEETTTTCC---CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEE
T ss_pred eEEEEECCCCCc---ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEE
Confidence 999999985332 2456678999999999999999999999999999999999988776654322 23488999
Q ss_pred EeCCCcEEEEeCCCCcEEEEEcCCCceeeee----cCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 152 FTPDGQYVVSGSGDGTLHAWNINTRNEVACW----NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
|+|+|++|++|+.||.|++||+.+++.+..+ .+|.+.|.+++|+|++.+|++|+ +.+++|++...
T Consensus 306 ~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 306 FSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred ECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999999999999999999999988887766 67999999999999999999998 88999998764
No 24
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1e-37 Score=233.72 Aligned_cols=210 Identities=14% Similarity=0.253 Sum_probs=177.7
Q ss_pred hhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcc----eeeeeeeccCCce--EEEcC--CCCEEEEEecCCeEE
Q 026679 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVN----ACQGILRLRGRPT--VAFDQ--QGLVFAVAMEAGAIK 79 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~~--~~~~~--~~~~l~~~~~dg~v~ 79 (235)
..+++|.+.|++++|+|++++|++++.||.|++||+.++ +....+..+...+ ++|+| ++++|++++.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 456799999999999999999999999999999999876 4556666666554 89999 699999999999999
Q ss_pred EEeccCCCCCC-----ceeEeecCCCcceeEEEEccC--CCeEEEecCCCcEEEEEcCCCceee----------------
Q 026679 80 LFDSRSYDKGP-----FDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEKRC---------------- 136 (235)
Q Consensus 80 i~d~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~---------------- 136 (235)
+||++...... .....+..|...|.+++|+|+ +++|++++.|+.|++||+++++...
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99998764322 235566789999999999999 9999999999999999987654221
Q ss_pred ------------------------------------------eeccCCCCCcceeeEEeCCC----cEEEEeCCCCcEEE
Q 026679 137 ------------------------------------------GFSLEPSPNTNTEATFTPDG----QYVVSGSGDGTLHA 170 (235)
Q Consensus 137 ------------------------------------------~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~v 170 (235)
......|...|.+++|+|++ ++|++++.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 22334567789999999998 89999999999999
Q ss_pred EEcCCC----------------------------------------------ceeeeecCCCcceeEEEeecCCCEEEEc
Q 026679 171 WNINTR----------------------------------------------NEVACWNGNIGVVACLKWAPRRAMFVAA 204 (235)
Q Consensus 171 ~d~~~~----------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 204 (235)
||++++ +.+..+.+|...|++++|+|++++|+++
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 999864 5667778899999999999999999999
Q ss_pred c--cceEEeeCCCCC
Q 026679 205 S--SVLSFWIPNPSS 217 (235)
Q Consensus 205 ~--~~i~iw~~~~~~ 217 (235)
+ +.+++|+++...
T Consensus 325 ~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 325 GDDGKVRLWKATYSN 339 (351)
T ss_dssp ETTSCEEEEEECTTS
T ss_pred cCCCcEEEEecCcCc
Confidence 8 789999998654
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-38 Score=240.00 Aligned_cols=214 Identities=23% Similarity=0.362 Sum_probs=177.6
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC-CceEEEcC-CCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG-RPTVAFDQ-QGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~-~~~~l~~~~~dg~v~ 79 (235)
++++.+..+++|...|.+++|+|++++|++++.|++|++||+++++....+..+. ...++++| +++++++++.|+.|+
T Consensus 153 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~ 232 (393)
T 1erj_A 153 ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 232 (393)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEE
T ss_pred CCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEE
Confidence 4567778889999999999999999999999999999999999998887776554 34489999 899999999999999
Q ss_pred EEeccCCCCCCce---eEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee----------eeeccCCCCCc
Q 026679 80 LFDSRSYDKGPFD---TFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR----------CGFSLEPSPNT 146 (235)
Q Consensus 80 i~d~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~----------~~~~~~~~~~~ 146 (235)
+||++++...... .....+|...|.+++|+|++++|++++.|+.|++||+++.... .......|...
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 312 (393)
T 1erj_A 233 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 312 (393)
T ss_dssp EEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSC
T ss_pred EEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCc
Confidence 9999876531000 0112568899999999999999999999999999999764321 12233456677
Q ss_pred ceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeec------CCCEEEEcc--cceEEeeCCC
Q 026679 147 NTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAP------RRAMFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~--~~i~iw~~~~ 215 (235)
|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.+++|++ ++.+|++++ +.+++|+++.
T Consensus 313 v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 313 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999999999999999999999999999999999999999999999886 688999997 7899999854
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=231.64 Aligned_cols=205 Identities=18% Similarity=0.307 Sum_probs=174.5
Q ss_pred cccccceeEEEeecCCCeeEEEeccceEEEEecCcc--eeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEeccCC
Q 026679 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVN--ACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRSY 86 (235)
Q Consensus 11 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~~ 86 (235)
.+|...|.+++|+|++++|++|+.|+++++||+..+ +....+..|...+ ++|+|++++|++++.|+.|++||++..
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 689999999999999999999999999999998776 4566777776554 999999999999999999999999875
Q ss_pred CCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC
Q 026679 87 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 166 (235)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (235)
.. ......+..|...|.+++|+|++++|++++.|+.|++||.+.++......+..|...|.+++|+|++++|++++.|+
T Consensus 138 ~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 138 DE-YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SC-EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CC-eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 42 12234567889999999999999999999999999999998887665556677778899999999999999999999
Q ss_pred cEEEEEcCCC---------------ceeeeecC-CCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 167 TLHAWNINTR---------------NEVACWNG-NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 167 ~i~v~d~~~~---------------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
.|++||.... +++..+.+ |...|.+++|+|++..|++++ +.+++|+.+..
T Consensus 217 ~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 217 TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 9999997432 22333444 788999999999999999987 77999998754
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.8e-38 Score=231.95 Aligned_cols=206 Identities=17% Similarity=0.217 Sum_probs=168.0
Q ss_pred hhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcce--eeeeeeccCCce--EEEcC--CCCEEEEEecCCeEEEE
Q 026679 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA--CQGILRLRGRPT--VAFDQ--QGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~~--~~~~~--~~~~l~~~~~dg~v~i~ 81 (235)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+.++. .+..+..|...+ ++|++ ++++|++++.|+.|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 3467999999999999999999999999999999998764 456777777655 88876 48999999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccC--CCeEEEecCCCcEEEEEcCCCcee-eeeccCCCCCcceeeEEeCC---
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEKR-CGFSLEPSPNTNTEATFTPD--- 155 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~i~~~~~~~~--- 155 (235)
|++++.. .....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.+... .......|...+.+++|+|+
T Consensus 87 d~~~~~~--~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 87 REENGTW--EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp CCSSSCC--CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred ECCCCcc--eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 9987542 224456789999999999997 789999999999999999876322 12334556677999999997
Q ss_pred --------------CcEEEEeCCCCcEEEEEcCCC---ceeeeecCCCcceeEEEeecCC----CEEEEcc--cceEEee
Q 026679 156 --------------GQYVVSGSGDGTLHAWNINTR---NEVACWNGNIGVVACLKWAPRR----AMFVAAS--SVLSFWI 212 (235)
Q Consensus 156 --------------~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~--~~i~iw~ 212 (235)
+++|++|+.|+.|++||++.. +.+..+.+|...|.+++|+|++ .+|++++ +.+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 478999999999999999754 4667788999999999999986 7899887 8899999
Q ss_pred CCC
Q 026679 213 PNP 215 (235)
Q Consensus 213 ~~~ 215 (235)
++.
T Consensus 245 ~~~ 247 (316)
T 3bg1_A 245 CDD 247 (316)
T ss_dssp CSS
T ss_pred ccC
Confidence 875
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.3e-37 Score=226.62 Aligned_cols=210 Identities=14% Similarity=0.246 Sum_probs=171.1
Q ss_pred hhhhhhhcccccceeEEEeecC--CCeeEEEeccceEEEEecCcce--eeeeeeccCCc--eEEEcCC--CCEEEEEecC
Q 026679 4 NRILRYFKGHKERVISLCMSPV--NDSFMSGSLDHSVRIWDLRVNA--CQGILRLRGRP--TVAFDQQ--GLVFAVAMEA 75 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~--~~~~~~~--~~~l~~~~~d 75 (235)
++++..+.+|.++|++++|+|+ +++|++|+.|++|++||+++++ ....+..|... .++|+|+ +.+|++++.|
T Consensus 43 ~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d 122 (297)
T 2pm7_B 43 HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD 122 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC
Confidence 3567788999999999999863 8899999999999999998774 44555555544 4999997 8999999999
Q ss_pred CeEEEEeccCCCCCCceeEeecCCCcceeEEEEccC-------------CCeEEEecCCCcEEEEEcCCCcee--eeecc
Q 026679 76 GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND-------------GKSMLLTTTNNNIYVLDAYGGEKR--CGFSL 140 (235)
Q Consensus 76 g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~ 140 (235)
+.|++||+++.... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.. ....+
T Consensus 123 ~~v~~wd~~~~~~~--~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l 200 (297)
T 2pm7_B 123 GKVSVVEFKENGTT--SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL 200 (297)
T ss_dssp SEEEEEEBCSSSCB--CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE
T ss_pred CcEEEEEecCCCce--eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe
Confidence 99999999875421 13455688999999999997 568999999999999999876521 22345
Q ss_pred CCCCCcceeeEEeCCC---cEEEEeCCCCcEEEEEcCCCce---eeee--cCCCcceeEEEeecCCCEEEEcc--cceEE
Q 026679 141 EPSPNTNTEATFTPDG---QYVVSGSGDGTLHAWNINTRNE---VACW--NGNIGVVACLKWAPRRAMFVAAS--SVLSF 210 (235)
Q Consensus 141 ~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~v~d~~~~~~---~~~~--~~~~~~v~~~~~~~~~~~l~~~~--~~i~i 210 (235)
..|...|.+++|+|++ ++|++++.|+.|++||+++... ...+ ..|...|.+++|+|++++|++++ +.+++
T Consensus 201 ~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~l 280 (297)
T 2pm7_B 201 EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTL 280 (297)
T ss_dssp CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEE
Confidence 5677889999999984 8999999999999999976431 1222 46788999999999999999987 78999
Q ss_pred eeCCC
Q 026679 211 WIPNP 215 (235)
Q Consensus 211 w~~~~ 215 (235)
|+...
T Consensus 281 w~~~~ 285 (297)
T 2pm7_B 281 WKENL 285 (297)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 99763
No 29
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-37 Score=234.95 Aligned_cols=198 Identities=21% Similarity=0.311 Sum_probs=170.3
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEeccCCCCCCcee
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDT 93 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~ 93 (235)
.|.+++|+|++++|++|+.|++|++||+.+++....+..|...+ ++|+|+++.|++++.|+.|++||+++++. .
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~----~ 200 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC----S 200 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE----E
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee----E
Confidence 49999999999999999999999999999999998888887655 99999999999999999999999987653 2
Q ss_pred EeecCCCcceeEEEEcc-CCCeEEEecCCCcEEEEEcCCCceeeeecc-----CCCCCcceeeEEeCCCcEEEEeCCCCc
Q 026679 94 FLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSL-----EPSPNTNTEATFTPDGQYVVSGSGDGT 167 (235)
Q Consensus 94 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (235)
..+ .+...+.+++|+| ++++|++++.|+.|++||+++++....+.. ..|...|.+++|+|++++|++|+.|+.
T Consensus 201 ~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 222 3556799999999 899999999999999999999887665532 356678999999999999999999999
Q ss_pred EEEEEcCCC------------ceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 168 LHAWNINTR------------NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 168 i~v~d~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
|++||+++. .+...+.+|...|.+++|+|++.+|++++ +.+++||......
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 999999753 34556778999999999999999999998 7899999976653
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-37 Score=229.65 Aligned_cols=204 Identities=16% Similarity=0.239 Sum_probs=164.1
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCc-------ceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRV-------NACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~-------~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
+|.+.|.+++|+|++++|++|+.|++|++||++. .+....+..|...+ ++|+|++++|++++.|+.|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 3999999999999999999999999999999853 34556666776544 99999999999999999999999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC--CcEEE
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD--GQYVV 160 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~ 160 (235)
++...........+.+|...|.+++|+|++++|++++.|+.|++||..++.......+..|...|.+++|+|+ +.+|+
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 9643322223456778999999999999999999999999999999987643333345567788999999998 77999
Q ss_pred EeCCCCcEEEEEcCCC--------ceeeeecC-CCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 161 SGSGDGTLHAWNINTR--------NEVACWNG-NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~--------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
+++.|+.|++||++.+ .....+.. |...|.+++|++++ +|++++ +.+++|+....
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 9999999999999764 33444554 88999999999776 666666 88999998654
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-37 Score=235.42 Aligned_cols=211 Identities=14% Similarity=0.304 Sum_probs=181.0
Q ss_pred hhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecC--cceeeeeeeccCCce--EEEcCC--CCEEEEEecCCe
Q 026679 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR--VNACQGILRLRGRPT--VAFDQQ--GLVFAVAMEAGA 77 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~~--~~~~~~--~~~l~~~~~dg~ 77 (235)
|+++..+++|.+.|++++|+|++++|++++.||.|++||+. +++....+..|...+ ++|+++ +++|++++.||.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 56788999999999999999999999999999999999998 556777777776555 889876 999999999999
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccC--CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC-
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP- 154 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~- 154 (235)
|++||+.+.+. ........|...|.+++|+|+ +.+|++++.|+.|++||++.+..........+...|.+++|+|
T Consensus 81 v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 81 VLIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred EEEEEcCCCce--eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 99999987642 124556678899999999999 9999999999999999999886555555566778899999999
Q ss_pred ------------CCcEEEEeCCCCcEEEEEcCCCc----eeeeecCCCcceeEEEeecC---CCEEEEcc--cceEEeeC
Q 026679 155 ------------DGQYVVSGSGDGTLHAWNINTRN----EVACWNGNIGVVACLKWAPR---RAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 155 ------------~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~v~~~~~~~~---~~~l~~~~--~~i~iw~~ 213 (235)
++++|++++.||.|++||++++. ....+.+|...|.+++|+|+ +.+|++++ +.+++|++
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 69999999999999999998765 44667789999999999999 89999997 78999999
Q ss_pred CCC
Q 026679 214 NPS 216 (235)
Q Consensus 214 ~~~ 216 (235)
+..
T Consensus 239 ~~~ 241 (379)
T 3jrp_A 239 DNE 241 (379)
T ss_dssp SST
T ss_pred CCC
Confidence 875
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-36 Score=225.13 Aligned_cols=210 Identities=27% Similarity=0.469 Sum_probs=180.8
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
++++.+..+++|...|.+++|+|++++|++|+.|+.|++||+++++....+..+...+ ++|+|++++|++++.||.|+
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 4567778889999999999999999999999999999999999999888888776554 89999999999999999999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEe-CCCcE
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQY 158 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~ 158 (235)
+||+++.+. .......+...+..++|+|++++|++++.|+.|++||+++++....+..+..........++ +++.+
T Consensus 175 ~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 175 IWDTASGQC---LKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp EEETTTCCE---EEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred EEECCCCce---eeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 999987653 12223456678999999999999999999999999999999888777655443333333444 67899
Q ss_pred EEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc----cceEEeeCC
Q 026679 159 VVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS----SVLSFWIPN 214 (235)
Q Consensus 159 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~i~iw~~~ 214 (235)
|++|+.||.|++||+++++.+..+.+|...|.+++|+|++.++++++ +.+++|+.+
T Consensus 252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999999999999999999999999999999999999874 679999865
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.6e-37 Score=234.40 Aligned_cols=206 Identities=12% Similarity=0.095 Sum_probs=170.0
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeee----eccCC--ceEEEcCCCCEEEEEecCCeEEEEe
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL----RLRGR--PTVAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~----~~~~~--~~~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
...+|...|++++|+|++. +++++.||+|++||+.+++..... ..|.. .+++|+|++++|++++.|+.|++||
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3456889999999999875 556788999999999887654332 23443 3499999999999999999999999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCC-eEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC-CcEEE
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD-GQYVV 160 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~ 160 (235)
+++++. ...+..|...|.+++|+|++. .+++++.|+.|++||+++++....+....+...+.+++|+|+ +.+|+
T Consensus 168 ~~~~~~----~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la 243 (357)
T 4g56_B 168 LSQKAV----LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFA 243 (357)
T ss_dssp TTTTEE----EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEE
T ss_pred CCCCcE----EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEE
Confidence 987654 666778999999999999875 688999999999999999988877777777788999999997 56889
Q ss_pred EeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCC-CEEEEcc--cceEEeeCCCCCCC
Q 026679 161 SGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR-AMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
+|+.|+.|++||+++++.+..+.+|...|++++|+|++ ++|++++ +.|+|||+++.+..
T Consensus 244 ~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 244 CGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp EEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred EeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 99999999999999999999999999999999999987 5788887 78999999876543
No 34
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-36 Score=228.19 Aligned_cols=208 Identities=18% Similarity=0.237 Sum_probs=171.7
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
+....+.+|...|.+++|+|++.++++++.|++|++||+++++....+..|...+ ++|+|+++.|++++.|+.|++||
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 4556788999999999999999999999999999999999999999998887655 99999999999999999999999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCC----------CeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEE
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDG----------KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATF 152 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 152 (235)
+..... ........|...|.+++|+|++ .+|++++.|+.|++||. ..+....+ ..|...|.+++|
T Consensus 147 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~--~~h~~~v~~~~~ 221 (343)
T 2xzm_R 147 ILGECK--FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTF--KAHESNVNHLSI 221 (343)
T ss_dssp SSSCEE--EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEE--ECCSSCEEEEEE
T ss_pred ccCCce--eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEE--cCccccceEEEE
Confidence 974221 0111123678899999999987 68999999999999994 44444444 455677999999
Q ss_pred eCCCcEEEEeCCCCcEEEEEcCCC-ceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCCCC
Q 026679 153 TPDGQYVVSGSGDGTLHAWNINTR-NEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSSN 218 (235)
Q Consensus 153 ~~~~~~l~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~~~ 218 (235)
+|+|++|++|+.||.|++||+.+. .....+ .+...|.+++|+|++.++++++ +.+++|++.+...
T Consensus 222 s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 222 SPNGKYIATGGKDKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSK 288 (343)
T ss_dssp CTTSSEEEEEETTCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCS
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCC
Confidence 999999999999999999999543 334444 3556799999999999988776 7899999976543
No 35
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.6e-37 Score=232.06 Aligned_cols=201 Identities=10% Similarity=0.081 Sum_probs=165.1
Q ss_pred cccceeEEEeecCCCeeEE--EeccceEEEEecCcceeeeeeeccC-CceEEEcCCCCEEEEEecCCeEEEEeccCCCCC
Q 026679 13 HKERVISLCMSPVNDSFMS--GSLDHSVRIWDLRVNACQGILRLRG-RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG 89 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s--~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 89 (235)
+...+.+++|+|||+++++ ++.|++|+|||+++++.+..+..+. +..++|+|+|+++++++.+ .+.+|+..++..
T Consensus 132 ~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~- 209 (365)
T 4h5i_A 132 ADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC- 209 (365)
T ss_dssp TTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE-
T ss_pred cccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcc-
Confidence 4456889999999998764 4579999999999999888876443 4459999999999999865 566666655442
Q ss_pred CceeEeecCCCcceeEEEEccCCCeEEEecCCC----cEEEEEcCCCcee--eeeccCCCCCcceeeEEeCCCcEEEEeC
Q 026679 90 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN----NIYVLDAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
........|...+.+++|+|+++.+++++.|+ .++.|++...... .......+...|++++|+|+|++||+|+
T Consensus 210 -~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 210 -IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp -EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred -eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 22334456788999999999999999998877 5888998776542 2334456667899999999999999999
Q ss_pred CCCcEEEEEcCCCceeeee-cCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 164 GDGTLHAWNINTRNEVACW-NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
.|+.|+|||+++++++..+ .+|..+|++++|+|||++|++++ ++|+||++...
T Consensus 289 ~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 289 NDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999998875 78999999999999999999998 88999999644
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-37 Score=235.22 Aligned_cols=207 Identities=16% Similarity=0.175 Sum_probs=167.6
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcce---eeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA---CQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
+.+..+.+|...|++++|+|++++|++++.|++|++||+.+++ ....+..+...+ ++|+|+++.|++++.|+.|+
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 6778899999999999999999999999999999999998877 455555555444 99999999999999999999
Q ss_pred EEeccCCCCCCceeEeecC-CCcceeEEEEccCCCeEEEecCCCcEEEEEcCC------------------Cceeeeecc
Q 026679 80 LFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG------------------GEKRCGFSL 140 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~------------------~~~~~~~~~ 140 (235)
+||+++.+.... ...+.. |...|.+++|+|++++|++++.|+.|++||++. ++....+
T Consensus 126 iwd~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (377)
T 3dwl_C 126 VCYFEQENDWWV-SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-- 202 (377)
T ss_dssp ECCC-----CCC-CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--
T ss_pred EEEECCccccee-eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--
Confidence 999987653212 233444 899999999999999999999999999999863 2333333
Q ss_pred CCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCce----eeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCC
Q 026679 141 EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE----VACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNP 215 (235)
Q Consensus 141 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~ 215 (235)
.|...|.+++|+|++++|++++.||.|++||+++++. +..+.+|..+|.+++|+|++++|++++ +.+.+|+...
T Consensus 203 -~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 203 -PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp -CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred -cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence 6677899999999999999999999999999999887 788899999999999999999999998 6677887763
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.4e-37 Score=243.47 Aligned_cols=200 Identities=22% Similarity=0.392 Sum_probs=177.0
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEE
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKL 80 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i 80 (235)
+++++..+.+|...|++++|+|++++|++++.|+.|++||. +++....+..+...+ ++|+|++++|++++.|+.|++
T Consensus 374 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 374 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKL 452 (577)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEE
Confidence 35567778899999999999999999999999999999995 567777777777655 899999999999999999999
Q ss_pred EeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEE
Q 026679 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV 160 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 160 (235)
||... + ....+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+. .|...|++++|+|++++|+
T Consensus 453 w~~~~-~----~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~--~h~~~v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 453 WNRNG-Q----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT--GHSSSVRGVAFSPDGQTIA 524 (577)
T ss_dssp EETTS-C----EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE--CCSSCEEEEEECTTSSCEE
T ss_pred EECCC-C----EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe--CCCCCEEEEEEcCCCCEEE
Confidence 99643 2 25566789999999999999999999999999999995 666666655 4556799999999999999
Q ss_pred EeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEee
Q 026679 161 SGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 212 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~ 212 (235)
+++.||.|++||. +++.+..+.+|...|++++|+||+++|++++ +.|++||
T Consensus 525 s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 525 SASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999999996 7888999999999999999999999999987 7799997
No 38
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.7e-36 Score=230.64 Aligned_cols=212 Identities=15% Similarity=0.216 Sum_probs=172.9
Q ss_pred chhhhhhhhc--ccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCc---------------------
Q 026679 2 YDNRILRYFK--GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--------------------- 58 (235)
Q Consensus 2 ~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~--------------------- 58 (235)
++|++++.++ +|...|++++|+|+|++|++|+.||+|++||+++++.+..+..|...
T Consensus 133 ~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~ 212 (420)
T 4gga_A 133 SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIH 212 (420)
T ss_dssp TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred CCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCcee
Confidence 4566665554 67889999999999999999999999999999988776665544222
Q ss_pred ----------------------eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeE-
Q 026679 59 ----------------------TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM- 115 (235)
Q Consensus 59 ----------------------~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l- 115 (235)
.+.++|++..+++++.|+.+++|+....+...........|...|.+++|+|++..+
T Consensus 213 ~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~l 292 (420)
T 4gga_A 213 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 292 (420)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEE
T ss_pred EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEE
Confidence 155667777888888888888888777655444455667788999999999976544
Q ss_pred EE--ecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC--CCCcEEEEEcCCCceeeeecCCCcceeE
Q 026679 116 LL--TTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--GDGTLHAWNINTRNEVACWNGNIGVVAC 191 (235)
Q Consensus 116 ~~--~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~~~v~~ 191 (235)
++ |+.|+.|++||+.+++....+..+ ..+.++.|+|+++.+++++ .|+.|++||+++++++..+.+|.+.|++
T Consensus 293 a~~~gs~D~~I~iwd~~t~~~~~~~~~~---~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~ 369 (420)
T 4gga_A 293 ATGGGTSDRHIRIWNVCSGACLSAVDAH---SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 369 (420)
T ss_dssp EEEECTTTCEEEEEETTTTEEEEEEECS---SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEeecCCCEEEEEeCCccccceeeccc---cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 43 457999999999999988776644 4588999999999887654 7999999999999999999999999999
Q ss_pred EEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 192 LKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 192 ~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
++|+|+|.+|++++ ++|++|++...
T Consensus 370 l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 370 LTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999999999998 78999998653
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.1e-36 Score=244.67 Aligned_cols=206 Identities=21% Similarity=0.296 Sum_probs=178.2
Q ss_pred hhhcccccceeEEEeecCC-CeeEEEeccceEEEEecCcc-----eeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 8 RYFKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVN-----ACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~-----~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
..+++|.+.|++++|+|++ ++|++|+.|++|++||+... .....+..|...+ ++|+|++++|++|+.||.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4578999999999999875 78999999999999998753 3455667776554 99999999999999999999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeee-ccCCCCCcceeeEEeCCC--
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGF-SLEPSPNTNTEATFTPDG-- 156 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~i~~~~~~~~~-- 156 (235)
+||+.++.. ...+.+|...|.+++|+|++++|++++.|+.|++||.......... ....|...|.+++|+|++
T Consensus 456 vwd~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 456 LWDLAAGVS----TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp EEETTTTEE----EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred EEECCCCcc----eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 999987653 5667789999999999999999999999999999998665433222 224566789999999986
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
..|++++.|+.|++||+++++....+.+|.+.|.+++|+|++++|++++ +.|++||+...+
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 6899999999999999999999999999999999999999999999998 889999997654
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.1e-35 Score=238.98 Aligned_cols=210 Identities=17% Similarity=0.242 Sum_probs=178.9
Q ss_pred hhhhhhhcccccceeEEEeecCCC-eeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEE
Q 026679 4 NRILRYFKGHKERVISLCMSPVND-SFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKL 80 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i 80 (235)
++....+.+|.+.|++++|+|++. .|++|+.|++|++||..+++....+..|...+ ++|+|++++|++++.|+.|++
T Consensus 137 ~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 137 GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 455667899999999999999986 59999999999999999998888888887554 999999999999999999999
Q ss_pred EeccCCCCCCceeEee-c------CCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeec--------------
Q 026679 81 FDSRSYDKGPFDTFLV-G------GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS-------------- 139 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~-~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-------------- 139 (235)
||+.+++. ...+ . +|...|.+++|+|++++|++++.|++|++||+++++....+.
T Consensus 217 wd~~~g~~----~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (611)
T 1nr0_A 217 YNGVDGTK----TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW 292 (611)
T ss_dssp EETTTCCE----EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE
T ss_pred EECCCCcE----eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE
Confidence 99987653 2223 1 789999999999999999999999999999999877654332
Q ss_pred ---------------------------cCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeee-cCCCcceeE
Q 026679 140 ---------------------------LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW-NGNIGVVAC 191 (235)
Q Consensus 140 ---------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~v~~ 191 (235)
...|...|.+++|+|+|++|++++.|+.|++||+.+++....+ .+|...|.+
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~ 372 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 372 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEE
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEE
Confidence 2356678999999999999999999999999999998877665 578899999
Q ss_pred EEeecCCCEEEEcc-cceEEeeCCCCC
Q 026679 192 LKWAPRRAMFVAAS-SVLSFWIPNPSS 217 (235)
Q Consensus 192 ~~~~~~~~~l~~~~-~~i~iw~~~~~~ 217 (235)
++|++++.++..+. +.+++|+.....
T Consensus 373 ~~~s~~~~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 373 IKTTSKGDLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp EEECTTSCEEEEETTTEEEEECSSSSS
T ss_pred EEECCCCcEEEEEcCCceEEeecCCcc
Confidence 99998875444333 889999987643
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.7e-36 Score=234.57 Aligned_cols=205 Identities=15% Similarity=0.205 Sum_probs=164.1
Q ss_pred hhhcccccceeEEEeecC-CCeeEEEeccceEEEEecCcceeeeee--eccC--CceEEEcC-CCCEEEEEecCCeEEEE
Q 026679 8 RYFKGHKERVISLCMSPV-NDSFMSGSLDHSVRIWDLRVNACQGIL--RLRG--RPTVAFDQ-QGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~~--~~~~~~~~-~~~~l~~~~~dg~v~i~ 81 (235)
....+|...|+||+|+|. +++||+|+.||+|+|||+.+++....+ .+|. +.+++|+| ++.+|++++.||+|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 344578889999999994 578999999999999999877654443 3454 44599998 68999999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCc-EEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ-YVV 160 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~ 160 (235)
|+++... ........+...+.+++|+|++++|++++.||.|++||++.. .+. .+..|...|.+++|+|+++ +|+
T Consensus 193 d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~--~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 193 DFKGNIL--RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELW--NLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp ETTSCEE--EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCC--CSBCCSSCEEEEEECTTCSSEEE
T ss_pred eccCCce--eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeE--EEecccceEEeeeecCCCceEEE
Confidence 9976432 111112233456789999999999999999999999998654 333 3445667899999999876 788
Q ss_pred EeCCCCcEEEEEcCCCceeeee---cCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 161 SGSGDGTLHAWNINTRNEVACW---NGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+++.|+.|++||+++.+....+ .+|...|++++|+|++.+|++++ +.|++|++....
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 9999999999999887654433 57889999999999999999998 789999997643
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-37 Score=233.64 Aligned_cols=206 Identities=10% Similarity=0.108 Sum_probs=167.5
Q ss_pred hcccccceeEEEeecCCCeeEEEeccceEEEEecCcc--eeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEeccC
Q 026679 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVN--ACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 10 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~ 85 (235)
++.|.++|++++|+|++++|++++.|+.|++||+.++ +....+..|...+ ++|+|++++|++++.|+.|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4456789999999999999999999999999999988 6777787776554 99999999999999999999999988
Q ss_pred CCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCce---eeeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 86 YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK---RCGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
... ......+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. .|...|.+++|+|++++|+++
T Consensus 87 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 87 DGT-WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp --C-CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSSEEEEE
T ss_pred CCc-eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCCEEEEE
Confidence 661 122555678999999999999999999999999999999998763 333332 266789999999999999999
Q ss_pred CCCCcEEEEEcC------------------CCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 163 SGDGTLHAWNIN------------------TRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 163 ~~dg~i~v~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
+.|+.|++||++ .++.+..+ +|...|.+++|+|++++|++++ +.+++|++.....
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 999999999985 34556666 8999999999999999999997 7899999987654
No 43
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.2e-35 Score=227.07 Aligned_cols=210 Identities=15% Similarity=0.200 Sum_probs=179.0
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEE
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKL 80 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i 80 (235)
+++....+..| ..+....|+|++++|++++.|+.|++||+.+++....+..|...+ ++|+|++++|++++.|+.|++
T Consensus 87 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 87 IRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp SEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 34555666666 455556789999999999999999999999998888877776554 999999999999999999999
Q ss_pred EeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCC------------------
Q 026679 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP------------------ 142 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------------------ 142 (235)
||+++.+. ...+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..+.
T Consensus 166 wd~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 241 (420)
T 3vl1_A 166 WSVKDGSN----PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ 241 (420)
T ss_dssp EETTTCCC----CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS
T ss_pred EeCCCCcC----ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce
Confidence 99988765 45567899999999999999999999999999999999998887766432
Q ss_pred ----CCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeec-CCCcceeEEEeecCCC-EEEEcc--cceEEeeCC
Q 026679 143 ----SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN-GNIGVVACLKWAPRRA-MFVAAS--SVLSFWIPN 214 (235)
Q Consensus 143 ----~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~--~~i~iw~~~ 214 (235)
+...+.+++|+|++++|++++.||.|++||+++++.+..+. .|...|.+++|+|++. +|++++ +.+++||++
T Consensus 242 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 242 LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 12456777889999999999999999999999988877764 4788999999999998 888887 789999998
Q ss_pred CCC
Q 026679 215 PSS 217 (235)
Q Consensus 215 ~~~ 217 (235)
...
T Consensus 322 ~~~ 324 (420)
T 3vl1_A 322 SPE 324 (420)
T ss_dssp CTT
T ss_pred CCc
Confidence 754
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-35 Score=224.66 Aligned_cols=208 Identities=14% Similarity=0.146 Sum_probs=179.4
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeee--ccCC--ceEEEcCCCCEEEEEecCCeEEEE
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGR--PTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~--~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++...... .+.. ..++|+|++++|++++.|+.+++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 677888999999999999999999999999999999998887555443 3333 349999999999999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcC------------------CCceeeeeccCCC
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY------------------GGEKRCGFSLEPS 143 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~------------------~~~~~~~~~~~~~ 143 (235)
|++..............|...|.+++|+|++++|++++.|+.|++||++ .++....+. .+
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 201 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--SS 201 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--CC
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC--CC
Confidence 9988653222233446788999999999999999999999999999964 455554443 56
Q ss_pred CCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCC
Q 026679 144 PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNP 215 (235)
Q Consensus 144 ~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~ 215 (235)
...+.+++|+|++++|++++.||.|++||+++++.+..+..|..+|.+++|+|++.+++++. +.+++|++..
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 67799999999999999999999999999999999999999999999999999999999887 8899999976
No 45
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-35 Score=222.19 Aligned_cols=206 Identities=16% Similarity=0.196 Sum_probs=178.6
Q ss_pred hhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEeccC
Q 026679 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~ 85 (235)
..+.+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+..+...+ ++|+|++++|++++.||.|++||+.+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 4578999999999999999999999999999999999999999998777654 99999999999999999999999988
Q ss_pred CCCCCceeEeecCCCcceeEEEEccCCCeEEEecCC-----CcEEEEEcCCCcee-----------eeeccCCCCCccee
Q 026679 86 YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKR-----------CGFSLEPSPNTNTE 149 (235)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~-----------~~~~~~~~~~~i~~ 149 (235)
.+. ..... +...+.+++|+|+++++++++.+ +.|.+||+...... ..+..+.....+.+
T Consensus 106 ~~~----~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 106 GQC----VATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp CCE----EEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred CcE----EEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 663 33333 77899999999999999999998 99999999766432 22222333237999
Q ss_pred eEEeCCCcEEEEeCCCCcEEEEEcCC-CceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 150 ATFTPDGQYVVSGSGDGTLHAWNINT-RNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 150 ~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
++|+|++++|++++.||.|++||+++ ++.+..+..|...|.+++|+|++.+|++++ +.+++||++....
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 99999999999999999999999998 788888999999999999999999999997 7899999976543
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.7e-35 Score=219.70 Aligned_cols=209 Identities=20% Similarity=0.306 Sum_probs=178.3
Q ss_pred hhhhhhhcccccceeEEEeecC-CCeeEEEeccceEEEEecCcce-----eeeeeeccCCce--EEEcCCCCEEEEEecC
Q 026679 4 NRILRYFKGHKERVISLCMSPV-NDSFMSGSLDHSVRIWDLRVNA-----CQGILRLRGRPT--VAFDQQGLVFAVAMEA 75 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~~~~~~--~~~~~~~~~l~~~~~d 75 (235)
.++..+|+||.+.|++++|+|+ +++|+||+.|++|++||+.+.+ +...+..|...+ ++|+|++++|++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 3455679999999999999997 5899999999999999987653 445566666544 9999999999999999
Q ss_pred CeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC
Q 026679 76 GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD 155 (235)
Q Consensus 76 g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~ 155 (235)
+.|++|+...... ......+...+....++++++.|++++.|+.+++||+...... ......+...+..++|+++
T Consensus 108 ~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~-~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 108 GTLRLWDLTTGTT----TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY-TVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp SEEEEEETTTTEE----EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EECSSSCSSCEEEEEECSC
T ss_pred ccceEEeecccce----eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE-EEEeccccCcccceEEccC
Confidence 9999999887553 4555567788889999999999999999999999998766543 3445566778999999886
Q ss_pred C--cEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 156 G--QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 156 ~--~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+ .++++++.|+.|++||+++++.+..+.+|..+|++++|+|++++|++++ +.+++||++...
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 4 5788999999999999999999999999999999999999999999998 789999997654
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-36 Score=235.55 Aligned_cols=205 Identities=11% Similarity=0.046 Sum_probs=170.5
Q ss_pred hhcccccceeEEEeecC------CCeeEEEeccceEEEEecCcceee-----------eeeeccCCce--EEEcCCCCEE
Q 026679 9 YFKGHKERVISLCMSPV------NDSFMSGSLDHSVRIWDLRVNACQ-----------GILRLRGRPT--VAFDQQGLVF 69 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~------~~~l~s~~~d~~i~vwd~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~l 69 (235)
.+.+|.+.|.+++|+|+ +.+||+++.||+|++||+..+... ..+..|...+ ++|+++ ..|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeE
Confidence 35678899999999996 579999999999999999766421 2445555444 888886 489
Q ss_pred EEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEE--EEccCC-CeEEEecCCCcEEEEEcCCCceeeeeccCCCCCc
Q 026679 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDI--KFSNDG-KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNT 146 (235)
Q Consensus 70 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 146 (235)
++|+.||+|++||+++... ....+..|...|.++ +|+|++ .+|++++.|++|++||+++++....+..+.....
T Consensus 281 asgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp EEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred EEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 9999999999999987532 234466899999999 578887 8899999999999999998876655544433234
Q ss_pred ceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 147 NTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+.+++|+|+++.+++++.|+.|++||++++..+..+.+|.+.|++++|+|++++|++|+ +++++|++....
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~ 430 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRL 430 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSST
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhh
Confidence 78899999999999999999999999999998888889999999999999999999998 889999986543
No 48
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=215.77 Aligned_cols=211 Identities=16% Similarity=0.221 Sum_probs=175.2
Q ss_pred chhhhhhhhc--ccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC-----------------------
Q 026679 2 YDNRILRYFK--GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG----------------------- 56 (235)
Q Consensus 2 ~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~----------------------- 56 (235)
++|++++.++ +|...|++++|+|++++|++|+.||+|++||+++++.+..+..|.
T Consensus 53 ~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 53 SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred CCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceE
Confidence 4666666654 678899999999999999999999999999999887766654431
Q ss_pred ------------------C--ceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEE
Q 026679 57 ------------------R--PTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML 116 (235)
Q Consensus 57 ------------------~--~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 116 (235)
. ..+.+.++++++++++.||.|++||+++++...........+...|.+++++|++..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 212 (318)
T 4ggc_A 133 HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVL 212 (318)
T ss_dssp EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEE
T ss_pred eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEE
Confidence 1 12667888999999999999999999987655555566677888999999999776543
Q ss_pred ---EecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe--CCCCcEEEEEcCCCceeeeecCCCcceeE
Q 026679 117 ---LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG--SGDGTLHAWNINTRNEVACWNGNIGVVAC 191 (235)
Q Consensus 117 ---~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~--~~dg~i~v~d~~~~~~~~~~~~~~~~v~~ 191 (235)
+++.++.|++||.+......... +...+..+.|+|+++.++++ +.|+.|++||+++++++..+.+|.+.|++
T Consensus 213 ~~~~~~~~~~i~lwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 213 ATGGGTSDRHIRIWNVCSGACLSAVD---AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 289 (318)
T ss_dssp EEEECTTTCEEEEEETTTCCEEEEEE---CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEecCCCCEEEEEeccccccccccc---ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 56778999999998887765543 33458999999999888764 47999999999999999999999999999
Q ss_pred EEeecCCCEEEEcc--cceEEeeCCC
Q 026679 192 LKWAPRRAMFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 192 ~~~~~~~~~l~~~~--~~i~iw~~~~ 215 (235)
++|+|++++|++++ +.|+|||+..
T Consensus 290 l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 290 LTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEcCCCCEEEEEecCCeEEEEECCC
Confidence 99999999999998 8899999854
No 49
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.7e-36 Score=222.92 Aligned_cols=208 Identities=16% Similarity=0.211 Sum_probs=168.2
Q ss_pred hhhhhcccccceeEEEeec--CCCeeEEEeccceEEEEecCcce--eeeeeeccC--CceEEEcCC--CCEEEEEecCCe
Q 026679 6 ILRYFKGHKERVISLCMSP--VNDSFMSGSLDHSVRIWDLRVNA--CQGILRLRG--RPTVAFDQQ--GLVFAVAMEAGA 77 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~--~~~~~~~~~--~~~l~~~~~dg~ 77 (235)
++..+++|.++|++++|+| ++++|++|+.|++|++||+++++ ....+..|. +..++|+|+ +.+|++++.|+.
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 4567899999999999986 48899999999999999998874 445555555 445999997 789999999999
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccC-----------------CCeEEEecCCCcEEEEEcCCCc-eeeeec
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND-----------------GKSMLLTTTNNNIYVLDAYGGE-KRCGFS 139 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~i~~~d~~~~~-~~~~~~ 139 (235)
|++||++.... .........|...+.+++|+|+ +++|++++.|+.|++||++... ......
T Consensus 129 i~lwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~ 207 (316)
T 3bg1_A 129 ISLLTYTGEGQ-WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK 207 (316)
T ss_dssp EEEEEECSSSC-EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC
T ss_pred EEEEecCCCCC-cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee
Confidence 99999986532 0012334578889999999997 4689999999999999997552 122334
Q ss_pred cCCCCCcceeeEEeCCC----cEEEEeCCCCcEEEEEcCCCc----eeeeecCCCcceeEEEeecCCCEEEEcc--cceE
Q 026679 140 LEPSPNTNTEATFTPDG----QYVVSGSGDGTLHAWNINTRN----EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLS 209 (235)
Q Consensus 140 ~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~ 209 (235)
+..|...|.+++|+|++ ++|++++.|+.|++||+++.. ....+..|...|.+++|+|++.+|++++ +.++
T Consensus 208 l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 208 LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 55677889999999986 899999999999999997631 2234566888999999999999999987 7899
Q ss_pred EeeCC
Q 026679 210 FWIPN 214 (235)
Q Consensus 210 iw~~~ 214 (235)
+|+..
T Consensus 288 lw~~~ 292 (316)
T 3bg1_A 288 LWKES 292 (316)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99975
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.8e-35 Score=222.16 Aligned_cols=207 Identities=11% Similarity=0.057 Sum_probs=177.8
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCcce--eeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEecc
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA--CQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
.+..|.++|++++|+|++++|++++.|+.|++||+.+++ ....+..|...+ ++|+|++++|++++.||.|++||+.
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 355699999999999999999999999999999999887 777887776554 9999999999999999999999997
Q ss_pred CCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee--eeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 85 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
+.+. ........|...+.+++|+|++++|++++.|+.|++||++.++.. .......|...|.+++|+|++++|+++
T Consensus 83 ~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 83 GRTW--KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp TTEE--EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCee--eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 7542 123344678899999999999999999999999999999887631 112224556789999999999999999
Q ss_pred CCCCcEEEEEc------------------CCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 163 SGDGTLHAWNI------------------NTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 163 ~~dg~i~v~d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+.||.|++||+ ..++.+..+..|...|.+++|+|++.+|++++ +.+++||++..+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99999999995 46778888889999999999999999999997 789999997654
No 51
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=5.8e-35 Score=223.80 Aligned_cols=207 Identities=15% Similarity=0.246 Sum_probs=174.8
Q ss_pred hhhhhcccccceeEEEeec-CCCeeEEEeccceEEEEecCcc-------eeeeeeeccCCce--EEEcCCC-CEEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSP-VNDSFMSGSLDHSVRIWDLRVN-------ACQGILRLRGRPT--VAFDQQG-LVFAVAME 74 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~-------~~~~~~~~~~~~~--~~~~~~~-~~l~~~~~ 74 (235)
.+..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++ +.+..+..|...+ ++|+|++ .+|++++.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 4556789999999999999 8999999999999999999887 5567777776554 9999998 69999999
Q ss_pred CCeEEEEeccCCCCCCceeEee--cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeee-ccCCCCCcceeeE
Q 026679 75 AGAIKLFDSRSYDKGPFDTFLV--GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGF-SLEPSPNTNTEAT 151 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~i~~~~ 151 (235)
||.|++||+++++. ...+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+ ..+. ...+.++.
T Consensus 153 dg~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~ 227 (402)
T 2aq5_A 153 DNVILVWDVGTGAA----VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHE-GTRPVHAV 227 (402)
T ss_dssp TSCEEEEETTTTEE----EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSC-SSSCCEEE
T ss_pred CCEEEEEECCCCCc----cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCC-CCcceEEE
Confidence 99999999987653 4455 678999999999999999999999999999999999887766 3332 23488999
Q ss_pred EeCCCcEEEEe---CCCCcEEEEEcCCCce-eeeec-CCCcceeEEEeecCCCEEEE-cc--cceEEeeCCCCC
Q 026679 152 FTPDGQYVVSG---SGDGTLHAWNINTRNE-VACWN-GNIGVVACLKWAPRRAMFVA-AS--SVLSFWIPNPSS 217 (235)
Q Consensus 152 ~~~~~~~l~~~---~~dg~i~v~d~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~-~~--~~i~iw~~~~~~ 217 (235)
|+|++++|++| +.|+.|++||+++++. +.... .|...+.+++|+|++.+|++ ++ +.|++|++....
T Consensus 228 ~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp ECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 99999999999 8999999999988664 32322 46778999999999999864 43 779999998765
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.5e-36 Score=227.25 Aligned_cols=211 Identities=15% Similarity=0.187 Sum_probs=174.2
Q ss_pred chhhhhhhhcccccceeEEEeec-CCCeeEEEeccceEEEEecCcceeeeee---eccCCce--EEEcCCCCEEEEEecC
Q 026679 2 YDNRILRYFKGHKERVISLCMSP-VNDSFMSGSLDHSVRIWDLRVNACQGIL---RLRGRPT--VAFDQQGLVFAVAMEA 75 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~---~~~~~~~--~~~~~~~~~l~~~~~d 75 (235)
++++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+ ..+...+ ++|+|+++.|++++.|
T Consensus 103 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 103 ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 45677888999999999999999 8899999999999999999999888887 4454444 9999999999999999
Q ss_pred CeEEEEeccCCCCCC------------------------ceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCC
Q 026679 76 GAIKLFDSRSYDKGP------------------------FDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG 131 (235)
Q Consensus 76 g~v~i~d~~~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 131 (235)
|.|++||+++.+... ........|...|.+++|+ ++++++++.|+.|++||+++
T Consensus 183 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 183 HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGK 260 (366)
T ss_dssp SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESS
T ss_pred CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCC
Confidence 999999998643200 0012233488899999998 77999999999999999987
Q ss_pred Cce------------eeeeccCCCCCcceeeEEeCC--CcEEEEeCCCCcEEEEEcCCCcee----eeecCC--CcceeE
Q 026679 132 GEK------------RCGFSLEPSPNTNTEATFTPD--GQYVVSGSGDGTLHAWNINTRNEV----ACWNGN--IGVVAC 191 (235)
Q Consensus 132 ~~~------------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~v~d~~~~~~~----~~~~~~--~~~v~~ 191 (235)
++. ........+...+.+++|+|+ +++|++++.||.|++||+.+++.. ..+..| ...|.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~ 340 (366)
T 3k26_A 261 MEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQ 340 (366)
T ss_dssp TTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEE
T ss_pred ccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEE
Confidence 654 112233345567999999999 999999999999999999987654 367777 789999
Q ss_pred EEeecCCCEEEEcc--cceEEeeCC
Q 026679 192 LKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 192 ~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
++|+|++++|++++ +.+++||+.
T Consensus 341 ~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 341 TSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999999998 789999985
No 53
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3e-35 Score=223.95 Aligned_cols=208 Identities=17% Similarity=0.197 Sum_probs=173.0
Q ss_pred hhhhhhcccccceeEEEeecCC-CeeEEEeccceEEEEecCcceeeeeeec--cCCc--eEEEcC-CCCEEEEEecCCeE
Q 026679 5 RILRYFKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRL--RGRP--TVAFDQ-QGLVFAVAMEAGAI 78 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~--~~~~~~-~~~~l~~~~~dg~v 78 (235)
++.+.+.+|.+.|++++|+|++ ++|++|+.||.|++||+.+++....+.. +... .++|+| ++..|++++.|+.|
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 3455678999999999999998 8999999999999999998887777653 5444 399999 78999999999999
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCc-
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ- 157 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 157 (235)
++||++.... ........+...|.+++|+|++++|++++.|+.|++||+ +++....+. .|...|.+++|+|+++
T Consensus 144 ~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~--~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 144 TLRDFSGSVI--QVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK--LHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEETTSCEE--EEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE--CSSSCEEEEEECSSCTT
T ss_pred EEEECCCCce--EEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec--cCCCcEEEEEECCCCCC
Confidence 9999985221 111112334578999999999999999999999999999 455555544 4557799999999999
Q ss_pred EEEEeCCCCcEEEEEcCC----CceeeeecCCCcceeEEEeec-CCCEEEEcc--cceEEeeCCCCCC
Q 026679 158 YVVSGSGDGTLHAWNINT----RNEVACWNGNIGVVACLKWAP-RRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 158 ~l~~~~~dg~i~v~d~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
+|++++.|+.|++||+++ +..+..+ +|...|.+++|+| ++.+|++++ +.+++||++....
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 999999999999999987 5566656 6899999999999 999999998 7899999976544
No 54
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-35 Score=240.88 Aligned_cols=208 Identities=21% Similarity=0.300 Sum_probs=179.0
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
..+.+.+|...|.+++|+|++++|++|+.|++|++||+.++.....+..|...+ ++|+|+++.|++++.|+.|++||.
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 345688999999999999999999999999999999999999999998887655 899999999999999999999998
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCC--CeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDG--KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 161 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (235)
..... ........+|...|.+++|+|++ ..+++++.|+.|++||+++++....+. .|...|.+++|+|++++|++
T Consensus 502 ~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~--~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 502 LGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA--GHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp TSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEE
T ss_pred CCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc--CCCCCEEEEEEeCCCCEEEE
Confidence 64321 00011124678889999999986 579999999999999999988776554 55677999999999999999
Q ss_pred eCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCCC
Q 026679 162 GSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSS 217 (235)
Q Consensus 162 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~~ 217 (235)
|+.||.|++||+++++.+..+.. ...|.+++|+|++.++++++ +.+++||+++..
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKIWDLESKS 634 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred EeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCC
Confidence 99999999999999998888764 46899999999999998887 779999998654
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3e-35 Score=226.36 Aligned_cols=209 Identities=16% Similarity=0.242 Sum_probs=174.3
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
++++....+.+|.+.|++++|+|++++|++++.|+.|++||+++++....+..|...+ ++|+|+++.|++++.||.|+
T Consensus 127 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~ 206 (420)
T 3vl1_A 127 NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIR 206 (420)
T ss_dssp TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 3456667788999999999999999999999999999999999999988888777655 99999999999999999999
Q ss_pred EEeccCCCCCCceeEeecC---C---------------------CcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee
Q 026679 80 LFDSRSYDKGPFDTFLVGG---D---------------------TAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR 135 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~---~---------------------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 135 (235)
+||+++++. ...+.. + ...+.+++|+|++++|++++.||.|++||+++++..
T Consensus 207 iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 207 LWECGTGTT----IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp EEETTTTEE----EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE
T ss_pred EeECCCCce----eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 999987653 222222 2 245555667899999999999999999999998877
Q ss_pred eeeccCCCCCcceeeEEeCCCc-EEEEeCCCCcEEEEEcCCCce-eeeecC-CCcceeEEEeecCCCEEEEcc--cceEE
Q 026679 136 CGFSLEPSPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINTRNE-VACWNG-NIGVVACLKWAPRRAMFVAAS--SVLSF 210 (235)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~i~i 210 (235)
..+. ..+...+.+++|+|+++ +|++|+.||.|++||+++++. +..+.. |...|.++.+ +++.+|++++ +.+++
T Consensus 283 ~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~i 360 (420)
T 3vl1_A 283 IQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKL 360 (420)
T ss_dssp EEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEE
T ss_pred EEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEE
Confidence 6654 34567899999999999 999999999999999998754 666766 5667888854 5788888887 78999
Q ss_pred eeCCCC
Q 026679 211 WIPNPS 216 (235)
Q Consensus 211 w~~~~~ 216 (235)
|++...
T Consensus 361 w~~~~~ 366 (420)
T 3vl1_A 361 DIISDP 366 (420)
T ss_dssp EEECCT
T ss_pred EeccCC
Confidence 998763
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-35 Score=221.48 Aligned_cols=211 Identities=14% Similarity=0.246 Sum_probs=176.9
Q ss_pred hhhhhhhhcccccceeEEEeecC--CCeeEEEeccceEEEEecCcce--eeeeeeccCCce--EEEcCC--CCEEEEEec
Q 026679 3 DNRILRYFKGHKERVISLCMSPV--NDSFMSGSLDHSVRIWDLRVNA--CQGILRLRGRPT--VAFDQQ--GLVFAVAME 74 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~~--~~~~~~--~~~l~~~~~ 74 (235)
+++.+..+.+|...|++++|+++ +++|++++.||.|++||+.+++ ....+..+...+ ++|+|+ +.++++++.
T Consensus 44 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 123 (379)
T 3jrp_A 44 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS 123 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC
Confidence 44566788899999999999987 8999999999999999999886 556666555444 999999 999999999
Q ss_pred CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEcc-------------CCCeEEEecCCCcEEEEEcCCCcee--eeec
Q 026679 75 AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-------------DGKSMLLTTTNNNIYVLDAYGGEKR--CGFS 139 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~ 139 (235)
|+.|++||++..... .......|...|.+++|+| ++.++++++.|+.|++||++++... ....
T Consensus 124 d~~i~v~d~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 201 (379)
T 3jrp_A 124 DGKVSVVEFKENGTT--SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 201 (379)
T ss_dssp TSEEEEEECCTTSCC--CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEecCCCCce--eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE
Confidence 999999999886432 2445668889999999999 6999999999999999999876532 2234
Q ss_pred cCCCCCcceeeEEeCC---CcEEEEeCCCCcEEEEEcCCCc-----eeeeecCCCcceeEEEeecCCCEEEEcc--cceE
Q 026679 140 LEPSPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRN-----EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLS 209 (235)
Q Consensus 140 ~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~ 209 (235)
...|...|.+++|+|+ +++|++++.||.|++||++++. .+.....|...|.+++|+|++.+|++++ +.++
T Consensus 202 ~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 202 LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 281 (379)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEE
T ss_pred EecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEE
Confidence 4566778999999999 8999999999999999998864 2233344788999999999999999887 7899
Q ss_pred EeeCCC
Q 026679 210 FWIPNP 215 (235)
Q Consensus 210 iw~~~~ 215 (235)
+|+++.
T Consensus 282 iw~~~~ 287 (379)
T 3jrp_A 282 LWKENL 287 (379)
T ss_dssp EEEEEE
T ss_pred EEeCCC
Confidence 999873
No 57
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=217.93 Aligned_cols=209 Identities=15% Similarity=0.269 Sum_probs=176.1
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC-------------------------
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG------------------------- 56 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------------------------- 56 (235)
.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++....+....
T Consensus 62 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~ 141 (369)
T 3zwl_B 62 LNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNP 141 (369)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBC
T ss_pred CCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCC
Confidence 4567788899999999999999999999999999999999998876655543111
Q ss_pred ------------------------------------CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCC
Q 026679 57 ------------------------------------RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT 100 (235)
Q Consensus 57 ------------------------------------~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~ 100 (235)
...++|+|+++.+++++.||.|++||+++.. .....+..|.
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~ 218 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY---EYVDSIDLHE 218 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT---EEEEEEECCS
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc---EeEEEEecCC
Confidence 1125566667777777777777777776521 1245566788
Q ss_pred cceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC--------------
Q 026679 101 AEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG-------------- 166 (235)
Q Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-------------- 166 (235)
..|.+++|+|++++|++++.|+.|++||+++++....+. +...+..++|+|+++++++++.++
T Consensus 219 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 219 KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred CceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec---CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 999999999999999999999999999999998887776 345699999999999999999888
Q ss_pred cEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 167 TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
.+++||..+++.+..+.+|...|.+++|+|++++|++++ +.+++|+++..
T Consensus 296 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 296 EARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred eeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 899999999999999999999999999999999999997 88999999764
No 58
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-35 Score=228.19 Aligned_cols=167 Identities=11% Similarity=0.190 Sum_probs=137.6
Q ss_pred hhhhcccccceeEEEeec-CCCeeEEEeccceEEEEecCcceeeeeeeccC----CceEEEcCCCCEEEEEecCCeEEEE
Q 026679 7 LRYFKGHKERVISLCMSP-VNDSFMSGSLDHSVRIWDLRVNACQGILRLRG----RPTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 7 ~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
...+.+|.+.|++++|+| ++++|++|+.||+|++||++++........+. ..+++|+|++.+|++|+.||.|++|
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 345678999999999998 67899999999999999998765544443333 2348999999999999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCC-eEEEecCCCcEEEEEcCCCceeeee-ccCCCCCcceeeEEeCCCcEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEKRCGF-SLEPSPNTNTEATFTPDGQYV 159 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l 159 (235)
|++... ...+..|...|.+++|+|++. ++++++.|+.|++||+++.+....+ ....|...|++++|+|+|++|
T Consensus 237 d~~~~~-----~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l 311 (435)
T 4e54_B 237 NMDGKE-----LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARL 311 (435)
T ss_dssp ESSSCB-----CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEE
T ss_pred ccCcce-----eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCee
Confidence 987533 345668899999999999876 5778899999999999887655433 234567789999999999999
Q ss_pred EEeCCCCcEEEEEcCCCce
Q 026679 160 VSGSGDGTLHAWNINTRNE 178 (235)
Q Consensus 160 ~~~~~dg~i~v~d~~~~~~ 178 (235)
++++.||.|++||+++++.
T Consensus 312 ~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 312 LTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp EEEESSSCEEEEESSSSSS
T ss_pred EEEcCCCEEEEEECCCCcc
Confidence 9999999999999876543
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=224.45 Aligned_cols=202 Identities=13% Similarity=0.172 Sum_probs=166.5
Q ss_pred cccceeEEEeecCCCeeEEEeccceEEEEecCcce-----------eeeeeeccC--------------CceEEEcCCC-
Q 026679 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-----------CQGILRLRG--------------RPTVAFDQQG- 66 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-----------~~~~~~~~~--------------~~~~~~~~~~- 66 (235)
|.+.|++++|+|++++|++|+.||.|++||+.+++ ....+..|. +..++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999998776 466777776 4459999998
Q ss_pred -CEEEEEecCCeEEEEeccCCCCC----------------------Cc--------------eeEeecCCCcceeEEEEc
Q 026679 67 -LVFAVAMEAGAIKLFDSRSYDKG----------------------PF--------------DTFLVGGDTAEVCDIKFS 109 (235)
Q Consensus 67 -~~l~~~~~dg~v~i~d~~~~~~~----------------------~~--------------~~~~~~~~~~~v~~~~~~ 109 (235)
..|++++.|+.|++||+.+.... .. ......+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 89999999999999998763210 00 001235789999999999
Q ss_pred cCCCeEEEecCCCcEEEEEcCC-Cceeeee-----ccCCCCCcceeeEEeCCC-cEEEEeCCCCcEEEEEcCCCce----
Q 026679 110 NDGKSMLLTTTNNNIYVLDAYG-GEKRCGF-----SLEPSPNTNTEATFTPDG-QYVVSGSGDGTLHAWNINTRNE---- 178 (235)
Q Consensus 110 ~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~-----~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~v~d~~~~~~---- 178 (235)
|++++|+++ .|+.|++||++. ++....+ ....|...|.+++|+|++ ++|++|+.||.|++||+++++.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999998 799999999984 3333322 244566789999999998 9999999999999999999886
Q ss_pred eeeecCCCc------------ceeEEEeecCCCEEEEcc-cceEEeeCCC
Q 026679 179 VACWNGNIG------------VVACLKWAPRRAMFVAAS-SVLSFWIPNP 215 (235)
Q Consensus 179 ~~~~~~~~~------------~v~~~~~~~~~~~l~~~~-~~i~iw~~~~ 215 (235)
+..+..|.. .|.+++|+|++++|++++ +.+++||++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~ 315 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNM 315 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCC
Confidence 677887775 899999999999999988 8999999975
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=7.1e-34 Score=212.31 Aligned_cols=200 Identities=18% Similarity=0.251 Sum_probs=175.0
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCcce--eeeeeeccCCc--eEEEcCCCCEEEEEecCCeEEEEeccCCC
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA--CQGILRLRGRP--TVAFDQQGLVFAVAMEAGAIKLFDSRSYD 87 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~--~~~~~~~~~~l~~~~~dg~v~i~d~~~~~ 87 (235)
+|...|.+++|+|++++|++++.|+.|++||+++++ ....+..+... .++|+|+++.+++++.||.|++||+++.+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 789999999999999999999999999999998876 45555555544 48999999999999999999999998765
Q ss_pred CCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCc
Q 026679 88 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT 167 (235)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (235)
. ...+..|...+.+++|+|+++.|++++.|+.|++||+++++....+. +...+.+++|+|++++|++++.++.
T Consensus 175 ~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 175 L----VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD---FTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp E----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred e----eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec---CCCceEEEEECCCCCEEEEEcCCCc
Confidence 3 55667789999999999999999999999999999999998877664 3456999999999999999999999
Q ss_pred EEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCCC
Q 026679 168 LHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
|++||+++++.. .+..|...|.+++|+|++++|++++ +.+++|+++.....
T Consensus 248 i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 248 VEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp EEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 999999887754 5677999999999999999999997 78999999876543
No 61
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-35 Score=239.19 Aligned_cols=208 Identities=14% Similarity=0.301 Sum_probs=177.2
Q ss_pred hhhhcccccceeEEEeecCCCeeEEEeccceEEEEecC--cceeeeeeeccCCce--EEEcCC--CCEEEEEecCCeEEE
Q 026679 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR--VNACQGILRLRGRPT--VAFDQQ--GLVFAVAMEAGAIKL 80 (235)
Q Consensus 7 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~~--~~~~~~--~~~l~~~~~dg~v~i 80 (235)
+..+++|.+.|++++|+|++++|++|+.||.|++||+. ++.....+..|...+ ++|+|+ ++.|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 46789999999999999999999999999999999998 556777777776555 899887 999999999999999
Q ss_pred EeccCCCCCCceeEeecCCCcceeEEEEccC--CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC----
Q 026679 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSND--GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP---- 154 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~---- 154 (235)
||+.++.. ........|...|.+++|+|+ ++.+++++.||.|++||++++..........+...|.+++|+|
T Consensus 82 wd~~~~~~--~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 82 WKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EECCCCcc--cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 99987541 125566789999999999999 9999999999999999999886555555566778899999999
Q ss_pred ---------CCcEEEEeCCCCcEEEEEcCCC----ceeeeecCCCcceeEEEeecC---CCEEEEcc--cceEEeeCCCC
Q 026679 155 ---------DGQYVVSGSGDGTLHAWNINTR----NEVACWNGNIGVVACLKWAPR---RAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 155 ---------~~~~l~~~~~dg~i~v~d~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~--~~i~iw~~~~~ 216 (235)
++++|++|+.||.|++||++++ .....+.+|..+|.+++|+|+ +.++++++ +.+++|++...
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 5899999999999999999877 455677889999999999999 89999998 78999999875
No 62
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.7e-35 Score=223.62 Aligned_cols=205 Identities=14% Similarity=0.246 Sum_probs=174.5
Q ss_pred hhhhccc-----ccceeEEEee----cCCCe-eEEEeccceEEEEecCc------ceeee-----eeec-------cC--
Q 026679 7 LRYFKGH-----KERVISLCMS----PVNDS-FMSGSLDHSVRIWDLRV------NACQG-----ILRL-------RG-- 56 (235)
Q Consensus 7 ~~~~~~h-----~~~v~~~~~~----~~~~~-l~s~~~d~~i~vwd~~~------~~~~~-----~~~~-------~~-- 56 (235)
+..+.+| ...|.+++|+ |++++ |++++.||.|++||+.+ ++.+. .+.. +.
T Consensus 109 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (397)
T 1sq9_A 109 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 188 (397)
T ss_dssp EEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCC
T ss_pred ceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCC
Confidence 6677788 5999999999 99999 99999999999999988 66665 5532 33
Q ss_pred CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecC---C---CcceeEEEEccCCCeEEEecCC---CcEEEE
Q 026679 57 RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG---D---TAEVCDIKFSNDGKSMLLTTTN---NNIYVL 127 (235)
Q Consensus 57 ~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~i~~~ 127 (235)
..+++|+|++ .+++++.||.|++||+++.+. ...+.. | ...+.+++|+|++++|++++.| +.|++|
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~ 263 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRP----LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEE----EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCce----eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEE
Confidence 4559999999 999999999999999987543 455556 7 8899999999999999999999 999999
Q ss_pred EcCCCceeeeeccCC-----------CCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeec------CC-----
Q 026679 128 DAYGGEKRCGFSLEP-----------SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN------GN----- 185 (235)
Q Consensus 128 d~~~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~------~~----- 185 (235)
|+++++.+..+.... +...|.+++|+|++++|++++.||.|++||+++++.+..+. .|
T Consensus 264 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 264 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCC
T ss_pred ECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhh
Confidence 999998887766411 55779999999999999999999999999999999999998 77
Q ss_pred ----------CcceeEEEeecCC----------CEEEEcc--cceEEeeCCCC
Q 026679 186 ----------IGVVACLKWAPRR----------AMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 186 ----------~~~v~~~~~~~~~----------~~l~~~~--~~i~iw~~~~~ 216 (235)
...|.+++|+|++ .+|++++ +.|++|+++++
T Consensus 344 ~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp CBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 8999999999998 7888887 88999998764
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-35 Score=228.79 Aligned_cols=214 Identities=13% Similarity=0.246 Sum_probs=172.2
Q ss_pred hhhhhhhh-cccccceeEEEeec-CCCeeEEEeccceEEEEecCc---ce---eeeeeeccC--CceEEEcCCCCEEEEE
Q 026679 3 DNRILRYF-KGHKERVISLCMSP-VNDSFMSGSLDHSVRIWDLRV---NA---CQGILRLRG--RPTVAFDQQGLVFAVA 72 (235)
Q Consensus 3 ~~~~~~~~-~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~---~~---~~~~~~~~~--~~~~~~~~~~~~l~~~ 72 (235)
+++++..+ ++|.+.|++++|+| ++++|++|+.||+|++||+.+ +. ....+. |. +.+++|+|+++.|+++
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~ 129 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-CSSTVTQITMIPNFDAFAVS 129 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-CSSCEEEEEECTTSSEEEEE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-CCCCEEEEEEeCCCCEEEEE
Confidence 35667778 89999999999999 999999999999999999976 43 222222 33 3449999999999999
Q ss_pred ecCCeEEEEecc---CCCCCC------ceeEeecC--CCcceeEEE--EccCCCeEEEecCCCcEEEEEcCCCceeeeec
Q 026679 73 MEAGAIKLFDSR---SYDKGP------FDTFLVGG--DTAEVCDIK--FSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS 139 (235)
Q Consensus 73 ~~dg~v~i~d~~---~~~~~~------~~~~~~~~--~~~~v~~~~--~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 139 (235)
+.||.|++||+. .++... .....+.. +...+.++. +++++.+|++++.|+.|++||+++++....+.
T Consensus 130 s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 209 (437)
T 3gre_A 130 SKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE 209 (437)
T ss_dssp ETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc
Confidence 999999999995 322100 00111111 445566666 55789999999999999999999999888887
Q ss_pred cCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeec-CCCcceeEEEee----cCCCEEEEcc--cceEEee
Q 026679 140 LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN-GNIGVVACLKWA----PRRAMFVAAS--SVLSFWI 212 (235)
Q Consensus 140 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~l~~~~--~~i~iw~ 212 (235)
.+.|...|++++|+|++++|++|+.||.|++||+++++.+..+. .|..+|.+++|+ |++.+|++++ +.+++||
T Consensus 210 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 210 NSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp CCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred cCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 65466789999999999999999999999999999999988876 688899999665 4678999997 7799999
Q ss_pred CCCCC
Q 026679 213 PNPSS 217 (235)
Q Consensus 213 ~~~~~ 217 (235)
++...
T Consensus 290 ~~~~~ 294 (437)
T 3gre_A 290 FVKGH 294 (437)
T ss_dssp TTTTE
T ss_pred cCCCc
Confidence 97654
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.4e-34 Score=213.47 Aligned_cols=199 Identities=15% Similarity=0.189 Sum_probs=175.1
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
....+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..+...+ ++|+|+++.+++++.||.|++||+
T Consensus 133 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 133 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 455677899999999999999999999999999999999999888888766544 899999999999999999999999
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
++.+. .....+...+.+++|+|+++.+++++.++.|++||+++++.. ....+...+.+++|+|++++|++++
T Consensus 213 ~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~ 284 (337)
T 1gxr_A 213 REGRQ-----LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY---QLHLHESCVLSLKFAYCGKWFVSTG 284 (337)
T ss_dssp TTTEE-----EEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE---EECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCce-----EeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE---EEcCCccceeEEEECCCCCEEEEec
Confidence 87653 222346788999999999999999999999999999987754 3445667899999999999999999
Q ss_pred CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeC
Q 026679 164 GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
.||.|++||+.+++.+... .|...+.+++|+|++++|++++ +.+++|++
T Consensus 285 ~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 285 KDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999999999999887554 4788999999999999999987 78999986
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=219.09 Aligned_cols=197 Identities=15% Similarity=0.232 Sum_probs=167.9
Q ss_pred hhhhhhhcccccceeEEEeecC---CCeeEEEeccceEEEEecCc-ceee-eeeeccCCce--EEEcCCCCEEEEEecCC
Q 026679 4 NRILRYFKGHKERVISLCMSPV---NDSFMSGSLDHSVRIWDLRV-NACQ-GILRLRGRPT--VAFDQQGLVFAVAMEAG 76 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~vwd~~~-~~~~-~~~~~~~~~~--~~~~~~~~~l~~~~~dg 76 (235)
.+.++.+++|.+.|++++|+|+ |++|++|+.||.|++||+.+ +... ..+..|...+ ++|+|++++|++++.||
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 3456678899999999999999 59999999999999999987 4444 6666666544 99999999999999999
Q ss_pred eEEEEeccCCCCCCceeEeecCCCcceeEEEE--ccCCCeEEEecCCCcEEEEEcCCCceeeeecc--------------
Q 026679 77 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF--SNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL-------------- 140 (235)
Q Consensus 77 ~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-------------- 140 (235)
.|++||+++.+ ......|...|.+++| +|++++|++++.|+.|++||+++++....+..
T Consensus 109 ~v~iwd~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 109 TAKMWDLSSNQ-----AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMA 183 (368)
T ss_dssp EEEEEETTTTE-----EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEE
T ss_pred cEEEEEcCCCC-----ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCee
Confidence 99999998765 3345678899999999 88999999999999999999987654322211
Q ss_pred --------------------------------------------------------------------------CCCCC-
Q 026679 141 --------------------------------------------------------------------------EPSPN- 145 (235)
Q Consensus 141 --------------------------------------------------------------------------~~~~~- 145 (235)
..+..
T Consensus 184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence 01111
Q ss_pred -----------cceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc
Q 026679 146 -----------TNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 146 -----------~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 205 (235)
.|.+++|+|++++|++++.||.|++||+++++.+..+..|..+|.+++|+|++.+|++++
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 589999999999999999999999999999999999999999999999999999999997
No 66
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-34 Score=230.27 Aligned_cols=205 Identities=21% Similarity=0.373 Sum_probs=177.2
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
+.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..+...+ ++|+|++++|++++.|+.|++||
T Consensus 335 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 335 QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 413 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 345567889999999999999999999999999999995 567777777776554 99999999999999999999999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
... + ....+..|...|.+++|+|++++|++++.|+.|++||. +++....+. .|...|.+++|+|++++|+++
T Consensus 414 ~~~-~----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~--~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 414 RNG-Q----LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT--GHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp TTC-C----EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE--CCSSCEEEEEECTTSCEEEEE
T ss_pred CCC-C----EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc--CCCCCEEEEEEcCCCCEEEEE
Confidence 542 2 24566789999999999999999999999999999996 455555444 455679999999999999999
Q ss_pred CCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCCC
Q 026679 163 SGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 163 ~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
+.|+.|++||. +++.+..+.+|...|++++|+|++++|++++ +.|++||.+.....
T Consensus 486 ~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~ 543 (577)
T 2ymu_A 486 SDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 543 (577)
T ss_dssp ETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEE
T ss_pred eCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEE
Confidence 99999999995 7888999999999999999999999999997 78999997654433
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.6e-34 Score=220.72 Aligned_cols=211 Identities=10% Similarity=0.090 Sum_probs=178.6
Q ss_pred hhhhhcccccceeEEEeecC----C---CeeEEEeccceEEEEecCccee-----eeeeeccC-----C--ceEEEc---
Q 026679 6 ILRYFKGHKERVISLCMSPV----N---DSFMSGSLDHSVRIWDLRVNAC-----QGILRLRG-----R--PTVAFD--- 63 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~----~---~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~~-----~--~~~~~~--- 63 (235)
++..+.+|...|++++|+|+ + ++|++++.|+.|++||+.+++. ...+..+. . ..++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 67788899999999999999 9 9999999999999999998876 77776662 3 339999
Q ss_pred -CCCCE-EEEEecCCeEEEEeccC------CCCCCce---eEee-----cCCCcceeEEEEccCCCeEEEecCCCcEEEE
Q 026679 64 -QQGLV-FAVAMEAGAIKLFDSRS------YDKGPFD---TFLV-----GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127 (235)
Q Consensus 64 -~~~~~-l~~~~~dg~v~i~d~~~------~~~~~~~---~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 127 (235)
|+++. |++++.||.|++||+++ ....... .+.. ..|...+.+++|+|++ .+++++.|+.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999988 4432110 2211 4578899999999999 99999999999999
Q ss_pred EcCCCceeeeecc-CCC---CCcceeeEEeCCCcEEEEeCCC---CcEEEEEcCCCceeeeecC-------------CCc
Q 026679 128 DAYGGEKRCGFSL-EPS---PNTNTEATFTPDGQYVVSGSGD---GTLHAWNINTRNEVACWNG-------------NIG 187 (235)
Q Consensus 128 d~~~~~~~~~~~~-~~~---~~~i~~~~~~~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~-------------~~~ 187 (235)
|+++++....+.. ..| ...+.+++|+|++++|++++.| |.|++||+++++.+..+.. |..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9999988877665 114 5679999999999999999999 9999999999999999988 999
Q ss_pred ceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 188 VVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 188 ~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
.|.+++|+|++++|++++ +.+++|++...+
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 999999999999999997 779999997654
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-34 Score=219.09 Aligned_cols=206 Identities=11% Similarity=0.164 Sum_probs=178.1
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeee-----------------------------
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR----------------------------- 53 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~----------------------------- 53 (235)
+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+.
T Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (425)
T 1r5m_A 138 TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD 217 (425)
T ss_dssp TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET
T ss_pred CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC
Confidence 356677788999999999999999999999999999999998776544332
Q ss_pred ---------------------------ccCCc--eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCccee
Q 026679 54 ---------------------------LRGRP--TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVC 104 (235)
Q Consensus 54 ---------------------------~~~~~--~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~ 104 (235)
.+... .++|+|++++|++++.|+.|++||+++.+. ...+..|...+.
T Consensus 218 ~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~i~ 293 (425)
T 1r5m_A 218 DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS----QNCFYGHSQSIV 293 (425)
T ss_dssp TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC----SEEECCCSSCEE
T ss_pred CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc----ceEecCCCccEE
Confidence 12222 388999999999999999999999988654 455567889999
Q ss_pred EEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCc-------
Q 026679 105 DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN------- 177 (235)
Q Consensus 105 ~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~------- 177 (235)
+++|+|++ .+++++.|+.|++||+++++....+.. +...+.+++|+|++++|++++.||.|++||+++++
T Consensus 294 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~ 370 (425)
T 1r5m_A 294 SASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV--DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLY 370 (425)
T ss_dssp EEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC--TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC------
T ss_pred EEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc--CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeee
Confidence 99999999 999999999999999999988876664 44669999999999999999999999999999888
Q ss_pred -------------eeeeecCCCc--ceeEEEeecCCCEEEEcc--cceEEeeCCC
Q 026679 178 -------------EVACWNGNIG--VVACLKWAPRRAMFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 178 -------------~~~~~~~~~~--~v~~~~~~~~~~~l~~~~--~~i~iw~~~~ 215 (235)
.+..+..|.. .|.+++|+|++++|++++ +.+++|++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 371 GNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp --------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred cccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 8888888876 999999999999999887 7899999863
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.6e-35 Score=218.73 Aligned_cols=209 Identities=21% Similarity=0.331 Sum_probs=171.9
Q ss_pred hhh-hhhhhcccccceeEEE------eecCCCeeEEEeccceEEEEecCcce-eeeeeeccCC----ce--EE----EcC
Q 026679 3 DNR-ILRYFKGHKERVISLC------MSPVNDSFMSGSLDHSVRIWDLRVNA-CQGILRLRGR----PT--VA----FDQ 64 (235)
Q Consensus 3 ~~~-~~~~~~~h~~~v~~~~------~~~~~~~l~s~~~d~~i~vwd~~~~~-~~~~~~~~~~----~~--~~----~~~ 64 (235)
+++ .+..+.+|...|.+++ |+|++++|++++.|+.|++||+++++ ....+..+.. .+ ++ |+|
T Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 99 APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 344 6778889999999995 57889999999999999999999886 6666654432 22 55 679
Q ss_pred CCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEcc---CCCeEEEecCCCcEEEEEcCCCceeeeec--
Q 026679 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN---DGKSMLLTTTNNNIYVLDAYGGEKRCGFS-- 139 (235)
Q Consensus 65 ~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-- 139 (235)
+++++++++.||.|++||+++.+. .....|...+.+++|+| +++++++++.||.|++||+++++....+.
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 253 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMAL-----RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV 253 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE
T ss_pred CCCEEEEEccCCeEEEEECccCce-----eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee
Confidence 999999999999999999987653 33456788999999999 99999999999999999998876554433
Q ss_pred -cCCCCCcceeeEEeCCCc-EEEEeCCCCcEEEEEcCCC-------------------ceeeeecCCCcceeEEEeecCC
Q 026679 140 -LEPSPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINTR-------------------NEVACWNGNIGVVACLKWAPRR 198 (235)
Q Consensus 140 -~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~ 198 (235)
...+...|.+++|+|+++ +|++++.||.|++||++++ +.+..+.+|...|.+++|+|++
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 333 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDK 333 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSS
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCC
Confidence 225667899999999998 8999999999999999754 3566778899999999999999
Q ss_pred CEEE-Ecc--cceEEeeCCCC
Q 026679 199 AMFV-AAS--SVLSFWIPNPS 216 (235)
Q Consensus 199 ~~l~-~~~--~~i~iw~~~~~ 216 (235)
++|+ +++ +.+++|++...
T Consensus 334 ~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 334 RGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp TTEEEEEETTSEEEEEEECC-
T ss_pred CeEEEEecCCCcEEEEECCCc
Confidence 9998 666 78999999754
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-33 Score=216.63 Aligned_cols=209 Identities=20% Similarity=0.276 Sum_probs=175.1
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecC-cceeeeeeeccCCce--EEEcCCCCEEEEEecCCeE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR-VNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAI 78 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v 78 (235)
++++.++.+.+|...|.+++|+ ++.|++++.||.|++||++ .......+..+...+ ++|+|++.+|++++.||.|
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v 241 (401)
T 4aez_A 164 ESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV 241 (401)
T ss_dssp TTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE
Confidence 4567778889999999999995 5799999999999999998 456677777776554 9999999999999999999
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEE-ec--CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL-TT--TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD 155 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~ 155 (235)
++||+++... ...+..|...|.+++|+|++..+++ ++ .|+.|++||+++++....+.. ...+.+++|+|+
T Consensus 242 ~iwd~~~~~~----~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~ 314 (401)
T 4aez_A 242 QIWDARSSIP----KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA---GSQVTSLIWSPH 314 (401)
T ss_dssp EEEETTCSSE----EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC---SSCEEEEEECSS
T ss_pred EEccCCCCCc----cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC---CCcEEEEEECCC
Confidence 9999987553 5667788999999999997765554 33 699999999999988877653 356999999999
Q ss_pred CcEEEE--eCCCCcEEEEEcCCCceee--eecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCCC
Q 026679 156 GQYVVS--GSGDGTLHAWNINTRNEVA--CWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 156 ~~~l~~--~~~dg~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
+++|++ |+.||.|++||+.+++... .+.+|...|.+++|+|++.+|++++ +.+++|++...+..
T Consensus 315 ~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 315 SKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp SSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred CCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 999998 6689999999999865544 4678999999999999999999997 78999999876543
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.8e-34 Score=235.55 Aligned_cols=212 Identities=14% Similarity=0.174 Sum_probs=189.2
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~ 79 (235)
.+++.+..+.+|..+|++++|+|++++|++++.||.|++||+.+++.+..+..|...+ ++|+|++..|++++.||.|+
T Consensus 43 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 122 (814)
T 3mkq_A 43 ETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK 122 (814)
T ss_dssp TTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEE
Confidence 4677788899999999999999999999999999999999999999999888777554 99999999999999999999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEcc-CCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC--CC
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP--DG 156 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 156 (235)
+||+.+.. .....+..|...|.+++|+| +++.+++++.||.|++||+.+++....+..+ +...+..++|+| ++
T Consensus 123 vw~~~~~~---~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 123 LWNWENNW---ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDK 198 (814)
T ss_dssp EEEGGGTS---EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC-CTTCCCEEEECCSTTC
T ss_pred EEECCCCc---eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC-CCCCEEEEEEEECCCC
Confidence 99998753 23456678899999999999 8899999999999999999888776655543 336689999999 99
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
++|++++.||.|++||+++++.+..+.+|...|.+++|+|++.++++++ +.+++|++.+..
T Consensus 199 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp CEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999999997 889999997654
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-34 Score=220.67 Aligned_cols=209 Identities=15% Similarity=0.221 Sum_probs=175.7
Q ss_pred hhhhhhcccccceeEEEeecC-CCeeEEEeccceEEEEecCcce------eeeee---eccC--CceEEEcCC-CCEEEE
Q 026679 5 RILRYFKGHKERVISLCMSPV-NDSFMSGSLDHSVRIWDLRVNA------CQGIL---RLRG--RPTVAFDQQ-GLVFAV 71 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~------~~~~~---~~~~--~~~~~~~~~-~~~l~~ 71 (235)
+.+..+.+|...|++++|+|+ +++|++++.|+.|++||+.+++ ....+ ..+. ...++|+|+ +.++++
T Consensus 104 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 104 NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEE
T ss_pred cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEE
Confidence 467788899999999999998 8999999999999999998876 33222 2333 445999998 789999
Q ss_pred EecCCeEEEEeccCCCCCCceeEeecCC------CcceeEEEEccCC-CeEEEecCCC---cEEEEEcCCCc-eeeeecc
Q 026679 72 AMEAGAIKLFDSRSYDKGPFDTFLVGGD------TAEVCDIKFSNDG-KSMLLTTTNN---NIYVLDAYGGE-KRCGFSL 140 (235)
Q Consensus 72 ~~~dg~v~i~d~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~i~~~d~~~~~-~~~~~~~ 140 (235)
++.||.|++||+++.+. ...+..+ ...+.+++|+|++ .++++++.|+ .|++||++++. ....+.
T Consensus 184 ~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~- 258 (416)
T 2pm9_A 184 AGSSNFASIWDLKAKKE----VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN- 258 (416)
T ss_dssp ESSSSCEEEEETTTTEE----EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC-
T ss_pred EcCCCCEEEEECCCCCc----ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee-
Confidence 99999999999987653 3344443 7889999999997 5888999998 99999999863 443332
Q ss_pred CCCCCcceeeEEeC-CCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCC-CEEEEcc--cceEEeeCCCC
Q 026679 141 EPSPNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR-AMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 141 ~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~~i~iw~~~~~ 216 (235)
..|...|.+++|+| ++++|++++.||.|++||+++++.+..+..|...|.+++|+|++ .+|++++ +.+++|++...
T Consensus 259 ~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 259 QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 15667899999999 99999999999999999999999999999999999999999999 8999987 78999999765
Q ss_pred CC
Q 026679 217 SN 218 (235)
Q Consensus 217 ~~ 218 (235)
..
T Consensus 339 ~~ 340 (416)
T 2pm9_A 339 TN 340 (416)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.6e-33 Score=218.27 Aligned_cols=209 Identities=18% Similarity=0.283 Sum_probs=180.3
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEc--CCCCEEEEEecCCe
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFD--QQGLVFAVAMEAGA 77 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~--~~~~~l~~~~~dg~ 77 (235)
.+++.+..+.+|.+.|++++|+|++ .|++|+.||+|++||+++++....+..|...+ ++++ +++.++++++.||.
T Consensus 150 ~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 150 INKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSC
T ss_pred CCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCc
Confidence 4677888899999999999999987 99999999999999999999999998777655 6776 57899999999999
Q ss_pred EEEEeccCCCCCCc-------------------eeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeee
Q 026679 78 IKLFDSRSYDKGPF-------------------DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGF 138 (235)
Q Consensus 78 v~i~d~~~~~~~~~-------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 138 (235)
|++||+++...... ......+|...+.++ +++++++++++.|+.|++||+++++.+..+
T Consensus 229 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 306 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 306 (464)
T ss_dssp EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 99999987653221 134556777778766 678899999999999999999999887766
Q ss_pred ccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 139 SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
. .|...+.+++|+|++++|++|+.||.|++||+++++.+..+.+|...|.+++|+ +.++++++ +.+++||++..
T Consensus 307 ~--~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 307 S--GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp C--CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred c--CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCC
Confidence 4 455779999999999999999999999999999999999999999999999997 47888887 88999999765
Q ss_pred C
Q 026679 217 S 217 (235)
Q Consensus 217 ~ 217 (235)
.
T Consensus 383 ~ 383 (464)
T 3v7d_B 383 S 383 (464)
T ss_dssp C
T ss_pred c
Confidence 4
No 74
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-33 Score=214.30 Aligned_cols=200 Identities=16% Similarity=0.162 Sum_probs=164.1
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCC-EEEEEecCCeEEEEeccCCCC
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGL-VFAVAMEAGAIKLFDSRSYDK 88 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~ 88 (235)
+|...|.+++|+|++++|++++.|+.|++||+ +++.+..+..+...+ ++|+|+++ ++++++.|+.|++||+++.+.
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence 34588999999999999999999999999999 577777787776554 99999998 999999999999999998554
Q ss_pred CCceeEeecCCCcceeEEEEcc-CCCeEEEecCCCcEEEEEcCCCceeeeeccCC-----CCC----------cceeeEE
Q 026679 89 GPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP-----SPN----------TNTEATF 152 (235)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~~----------~i~~~~~ 152 (235)
........ .|...|.+++|+| ++++|++++.|+.|++||+++++....+..+. +.. .+..++|
T Consensus 240 ~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 240 KNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp TTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred ccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 33333333 6889999999999 99999999999999999999887765554332 112 2333556
Q ss_pred eCCCcEEEEeCCCCcEEEEEcCCCceeeeecC--CCcceeEEEeecCCCEEEEcc-cceEEeeCCC
Q 026679 153 TPDGQYVVSGSGDGTLHAWNINTRNEVACWNG--NIGVVACLKWAPRRAMFVAAS-SVLSFWIPNP 215 (235)
Q Consensus 153 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~ 215 (235)
+|++++ +++.|+.|++||+.+++.+..+.+ |...+..++|+|++++|++++ +.|++|++++
T Consensus 319 s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 319 YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 666665 778999999999999999999886 456788889999999999998 7899999864
No 75
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.4e-33 Score=212.67 Aligned_cols=209 Identities=13% Similarity=0.110 Sum_probs=157.4
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEE-EEEecCCeEEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVF-AVAMEAGAIKL 80 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg~v~i 80 (235)
.+++.+..+++|...|++++|+|+|++|++|+.|+ +++||+++++.......+....+++.++++.+ ++++.|+.|++
T Consensus 7 ~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 7 ITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp ------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEE
T ss_pred cccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEE
Confidence 45566777899999999999999999999998775 78999988877766666666778999988877 56777899999
Q ss_pred EeccCCCCCCceeEeecCCCcceeEEEEccCC-----------------------------------CeEEE--ecCCCc
Q 026679 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG-----------------------------------KSMLL--TTTNNN 123 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----------------------------------~~l~~--~~~d~~ 123 (235)
||..+++. ...+ .+...|.+++++++. ..+++ ++.+|.
T Consensus 86 Wd~~~~~~----~~~~-~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~ 160 (355)
T 3vu4_A 86 WDDVKKQD----VSRI-KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQ 160 (355)
T ss_dssp EETTTTEE----EEEE-ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTC
T ss_pred EECCCCcE----EEEE-ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcE
Confidence 99987653 2222 244567777776542 23444 577889
Q ss_pred EEEEEcCCCcee--------------eeeccCCCCCcceeeEEeCCCcEEEEeCCCCc-EEEEEcCCCceeeeec-C-CC
Q 026679 124 IYVLDAYGGEKR--------------CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT-LHAWNINTRNEVACWN-G-NI 186 (235)
Q Consensus 124 i~~~d~~~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~v~d~~~~~~~~~~~-~-~~ 186 (235)
|++||+++++.. ....+..|...|.+++|+|+|++|++|+.|++ |++||+++++.+..+. + |.
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~ 240 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR 240 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC
Confidence 999998875410 02234567788999999999999999999998 9999999999999998 5 99
Q ss_pred cceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 187 GVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 187 ~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
..|.+++|+|++++|++++ +.+++|+++..
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9999999999999999998 78999999764
No 76
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.6e-34 Score=216.96 Aligned_cols=209 Identities=10% Similarity=0.160 Sum_probs=176.6
Q ss_pred hhhhhhhhcc-----cccceeEEEeecC----CCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcC-CCCEEE
Q 026679 3 DNRILRYFKG-----HKERVISLCMSPV----NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQ-QGLVFA 70 (235)
Q Consensus 3 ~~~~~~~~~~-----h~~~v~~~~~~~~----~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~-~~~~l~ 70 (235)
+++.++.++. |...|++++|+|+ +++|++|+.||.|++||+.+++.+..+..+...+ ++|+| ++.+|+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 132 (366)
T 3k26_A 53 SQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLL 132 (366)
T ss_dssp GGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEE
T ss_pred CCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEE
Confidence 3444455544 5578999999998 6689999999999999999999999888777555 99999 999999
Q ss_pred EEecCCeEEEEeccCCCCCCceeEee---cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeecc-------
Q 026679 71 VAMEAGAIKLFDSRSYDKGPFDTFLV---GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL------- 140 (235)
Q Consensus 71 ~~~~dg~v~i~d~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~------- 140 (235)
+++.||.|++||+++.+. ...+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+..
T Consensus 133 s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 208 (366)
T 3k26_A 133 SVSKDHALRLWNIQTDTL----VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPN 208 (366)
T ss_dssp EEETTSCEEEEETTTTEE----EEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGG
T ss_pred EEeCCCeEEEEEeecCeE----EEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCC
Confidence 999999999999987653 3344 57899999999999999999999999999999988765433221
Q ss_pred -------------------CCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCce--------------eeeecCCCc
Q 026679 141 -------------------EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE--------------VACWNGNIG 187 (235)
Q Consensus 141 -------------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--------------~~~~~~~~~ 187 (235)
..+...|.+++|+ +++|++++.|+.|++||+++++. +..+..|..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC 286 (366)
T ss_dssp GCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC
T ss_pred CCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCC
Confidence 1256779999998 77999999999999999987654 677788999
Q ss_pred ceeEEEeecC--CCEEEEcc--cceEEeeCCCCC
Q 026679 188 VVACLKWAPR--RAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 188 ~v~~~~~~~~--~~~l~~~~--~~i~iw~~~~~~ 217 (235)
.|.+++|+|+ +.+|++++ +.|++|+++...
T Consensus 287 ~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 287 DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 9999999999 99999998 889999998764
No 77
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.1e-34 Score=235.43 Aligned_cols=207 Identities=15% Similarity=0.217 Sum_probs=183.1
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
+..+.+++|.+.|++++|+|++++|++++.||.|++||+.+++.+..+..+...+ ++|+|++++|++++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3556789999999999999999999999999999999999999999998877654 99999999999999999999999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCC-ceeeeeccCCCCCcceeeEEeC-CCcEEE
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG-EKRCGFSLEPSPNTNTEATFTP-DGQYVV 160 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~i~~~~~~~-~~~~l~ 160 (235)
+.+++. ...+..|...|.+++|+|++++|++++.||.|++||+.++ .....+. .|...+.+++|+| +++.|+
T Consensus 84 ~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 84 YNTGEK----VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE--GHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp TTTCCE----EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE--CCSSCEEEEEEETTEEEEEE
T ss_pred CCCCcE----EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc--CCCCcEEEEEEEcCCCCEEE
Confidence 988764 5666789999999999999999999999999999999887 4444443 4556799999999 899999
Q ss_pred EeCCCCcEEEEEcCCCceeeeecCCC-cceeEEEeec--CCCEEEEcc--cceEEeeCCCCC
Q 026679 161 SGSGDGTLHAWNINTRNEVACWNGNI-GVVACLKWAP--RRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+++.||.|++||+.+++....+..+. ..+.+++|+| ++.++++++ +.+++|++....
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred EEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99999999999999888877776554 8899999999 999999997 789999987654
No 78
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.6e-33 Score=208.92 Aligned_cols=205 Identities=15% Similarity=0.243 Sum_probs=159.3
Q ss_pred hhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCc--------------------------
Q 026679 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-------------------------- 58 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-------------------------- 58 (235)
.+.+.+++|...|.+++|+|++++|++++.|+.|++|+............+...
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 345678899999999999999999999999999999998765443333222111
Q ss_pred -------------------eEEEcCC--CCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEE
Q 026679 59 -------------------TVAFDQQ--GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL 117 (235)
Q Consensus 59 -------------------~~~~~~~--~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 117 (235)
.++|+++ ..++++++.|+.|++||+++.+. ...+.+|...|.+++|+|++++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~----~~~~~~h~~~v~~~~~s~~~~~l~s 232 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL----KTNHIGHTGYLNTVTVSPDGSLCAS 232 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce----eeEecCCCCcEEEEEECCCCCEEEE
Confidence 1444443 24556666666666666665442 4556678899999999999999999
Q ss_pred ecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeee---------cCCCcc
Q 026679 118 TTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW---------NGNIGV 188 (235)
Q Consensus 118 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~---------~~~~~~ 188 (235)
++.|+.|++||+++.+.+..+..+ ..+.++.|+|++.++ +++.|+.|++||++++..+..+ .+|...
T Consensus 233 ~s~Dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 233 GGKDGQAMLWDLNEGKHLYTLDGG---DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp EETTCEEEEEETTTTEEEEEEECS---SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCC
T ss_pred EeCCCeEEEEEeccCceeeeecCC---ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCC
Confidence 999999999999999888766543 458999999988665 5557999999999887766554 357889
Q ss_pred eeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 189 VACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 189 v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
|++++|+|++++|++++ +.|+||++++++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999998 889999998764
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-33 Score=214.10 Aligned_cols=208 Identities=18% Similarity=0.242 Sum_probs=176.5
Q ss_pred hhhhhhhhcc-cccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEE
Q 026679 3 DNRILRYFKG-HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 3 ~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
+++....+.. |...|++++|+|++++|++|+.||.|++||+.+++.+..+..+...+.++..+++.+++++.||.|++|
T Consensus 122 ~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~ 201 (401)
T 4aez_A 122 SGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHH 201 (401)
T ss_dssp TCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred CCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEE
Confidence 4555555555 889999999999999999999999999999999999999988877764444477899999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC-cEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG-QYVV 160 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 160 (235)
|++.... ....+..|...|.+++|+|++++|++++.|+.|++||+++++....+. .+...|.+++|+|++ .+++
T Consensus 202 d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~p~~~~ll~ 276 (401)
T 4aez_A 202 DVRIANH---QIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT--NHNAAVKAVAWCPWQSNLLA 276 (401)
T ss_dssp ETTSSSC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC--CCSSCCCEEEECTTSTTEEE
T ss_pred ecccCcc---eeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec--CCcceEEEEEECCCCCCEEE
Confidence 9985432 355667899999999999999999999999999999999988776554 455779999999976 4556
Q ss_pred EeC--CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEE--cc--cceEEeeCCCC
Q 026679 161 SGS--GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVA--AS--SVLSFWIPNPS 216 (235)
Q Consensus 161 ~~~--~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~--~~i~iw~~~~~ 216 (235)
+++ .|+.|++||+++++.+..+. +...|.+++|+|++.++++ |+ +.+++|++...
T Consensus 277 ~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 277 TGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp EECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred EecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 654 79999999999999988886 6678999999999999998 43 78999999764
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=8.4e-34 Score=219.15 Aligned_cols=213 Identities=17% Similarity=0.341 Sum_probs=173.4
Q ss_pred hhhhhhhcccccceeEEEeecCCC-eeEEEeccceEEEEecCccee-------eeeeeccCCc--eEEEcC-CCCEEEEE
Q 026679 4 NRILRYFKGHKERVISLCMSPVND-SFMSGSLDHSVRIWDLRVNAC-------QGILRLRGRP--TVAFDQ-QGLVFAVA 72 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~-------~~~~~~~~~~--~~~~~~-~~~~l~~~ 72 (235)
.+.+..+.+|...|++++|+|++. +|++|+.||.|++||+..+.. ...+..|... .++|+| ++.+|+++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 250 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV 250 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE
Confidence 456677889999999999999987 999999999999999987322 3344455543 499999 77899999
Q ss_pred ecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCC-eEEEecCCCcEEEEEcCC-CceeeeeccCCCCCcceee
Q 026679 73 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYG-GEKRCGFSLEPSPNTNTEA 150 (235)
Q Consensus 73 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~i~~~ 150 (235)
+.||.|++||+++.... .....+..|...|++++|+|++. .+++++.||.|++||++. .+.+..+. .|...|.++
T Consensus 251 ~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~--~h~~~v~~i 327 (430)
T 2xyi_A 251 ADDQKLMIWDTRNNNTS-KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQV 327 (430)
T ss_dssp ETTSEEEEEETTCSCSS-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE--CCSSCEEEE
T ss_pred eCCCeEEEEECCCCCCC-cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee--cCCCCEEEE
Confidence 99999999999976421 12344557889999999999987 588999999999999998 44455444 455779999
Q ss_pred EEeCCCc-EEEEeCCCCcEEEEEcCC--------------CceeeeecCCCcceeEEEeecCCC-EEEEcc--cceEEee
Q 026679 151 TFTPDGQ-YVVSGSGDGTLHAWNINT--------------RNEVACWNGNIGVVACLKWAPRRA-MFVAAS--SVLSFWI 212 (235)
Q Consensus 151 ~~~~~~~-~l~~~~~dg~i~v~d~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~~i~iw~ 212 (235)
+|+|+++ +|++++.|+.|++||+.. .+.+..+.+|...|.+++|+|++. ++++++ +.|++|+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 9999985 689999999999999986 356677788999999999999999 777776 7899999
Q ss_pred CCCCCCC
Q 026679 213 PNPSSNS 219 (235)
Q Consensus 213 ~~~~~~~ 219 (235)
+......
T Consensus 408 ~~~~~~~ 414 (430)
T 2xyi_A 408 MAENVYN 414 (430)
T ss_dssp ECHHHHC
T ss_pred ccccccc
Confidence 9765433
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.8e-33 Score=211.46 Aligned_cols=205 Identities=15% Similarity=0.278 Sum_probs=169.5
Q ss_pred cccccceeEEEeec-CCCeeEEEeccceEEEEecCcceeeeeeeccCC-ceEEEcC---CCCEEEEEecCCeEEEEeccC
Q 026679 11 KGHKERVISLCMSP-VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR-PTVAFDQ---QGLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 11 ~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~---~~~~l~~~~~dg~v~i~d~~~ 85 (235)
.+|...|.+++|+| ++.+|++++.|+.|++||+.+++....+..... ..+.++| ++.++++++.+|.|++||+++
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 46999999999999 678999999999999999999988888775443 3478887 455999999999999999988
Q ss_pred CCCCCceeEeecCCCcceeEEEEccCCCe-EEEecCCCcEEEEEcCCCce-eeeec-------------cCCCCCcceee
Q 026679 86 YDKGPFDTFLVGGDTAEVCDIKFSNDGKS-MLLTTTNNNIYVLDAYGGEK-RCGFS-------------LEPSPNTNTEA 150 (235)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~-~~~~~-------------~~~~~~~i~~~ 150 (235)
.+. ...+..|...|.+++|+|++++ +++++.||.|++||++++.. ...+. ...+...|.++
T Consensus 176 ~~~----~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 176 GSC----SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SCC----CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred cce----eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 764 5566789999999999999985 88999999999999987652 22211 13466789999
Q ss_pred EEeCCCcEEEEeCCCCcEEEEEcCCCc-----------------------------------------------eeeeec
Q 026679 151 TFTPDGQYVVSGSGDGTLHAWNINTRN-----------------------------------------------EVACWN 183 (235)
Q Consensus 151 ~~~~~~~~l~~~~~dg~i~v~d~~~~~-----------------------------------------------~~~~~~ 183 (235)
+|+|++++|++++.||.|++||+++++ .+..+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 999999999999999999999987643 344556
Q ss_pred CCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCCC
Q 026679 184 GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 184 ~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
+|...|.+++|+|++.+|++++ +.+++|+++..+..
T Consensus 332 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 332 GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 7889999999999999999997 78999999876543
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.7e-34 Score=219.36 Aligned_cols=209 Identities=15% Similarity=0.258 Sum_probs=173.4
Q ss_pred hhhhhhcccccceeEEEeecCC-CeeEEEeccceEEEEecCcceeeeee--eccCCc--eEEEcCCCCEEEEEecCCeEE
Q 026679 5 RILRYFKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGIL--RLRGRP--TVAFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~~~~--~~~~~~~~~~l~~~~~dg~v~ 79 (235)
+.+..+.+|...|.+++|+|++ .+|++++.|+.|++||+++++....+ ..+... .++|+|++++|++++.||.|+
T Consensus 122 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 122 EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 5577888999999999999998 69999999999999999999998888 555544 499999999999999999999
Q ss_pred EEeccCCCCCCceeEee-cCCCcc-eeEEEEccCCCeEEEe---cCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC
Q 026679 80 LFDSRSYDKGPFDTFLV-GGDTAE-VCDIKFSNDGKSMLLT---TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP 154 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~---~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~ 154 (235)
+||+++++. ...+ ..|... +.++.|+|++++|+++ +.|+.|++||+++++.........+...+.+++|+|
T Consensus 202 iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 202 VIEPRKGTV----VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDP 277 (402)
T ss_dssp EEETTTTEE----EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEET
T ss_pred EEeCCCCce----eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcC
Confidence 999987653 3344 566655 8999999999999998 789999999999876522222223446799999999
Q ss_pred CCcEEE-EeCCCCcEEEEEcCCCce-eeeecC--CCcceeEEEeecCCCEEEEcccceEEeeCCCCC
Q 026679 155 DGQYVV-SGSGDGTLHAWNINTRNE-VACWNG--NIGVVACLKWAPRRAMFVAASSVLSFWIPNPSS 217 (235)
Q Consensus 155 ~~~~l~-~~~~dg~i~v~d~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~ 217 (235)
++++|+ +++.||.|++||+.+++. +..+.. |..+|.+++|+|++.+++++++.+++|++....
T Consensus 278 ~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 278 DTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERK 344 (402)
T ss_dssp TTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTE
T ss_pred CCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCCCc
Confidence 999986 566799999999998874 444433 558999999999999998888999999987653
No 83
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-33 Score=232.81 Aligned_cols=200 Identities=14% Similarity=0.116 Sum_probs=168.5
Q ss_pred cccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeecc-CCceEEEcCCCCEEEEEecCCeEEEEeccCCCCC
Q 026679 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG 89 (235)
Q Consensus 11 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 89 (235)
.+|...|++++|+|++++||+|+.||+|++|+....+....+... .+..++|+| +++|++++.|+.|++||+++++.
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~- 91 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV- 91 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE-
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE-
Confidence 489999999999999999999999999999999877665554322 234499999 88999999999999999987653
Q ss_pred CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeee---------eccCCCCCcceeeEEeCC-CcEE
Q 026679 90 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCG---------FSLEPSPNTNTEATFTPD-GQYV 159 (235)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~---------~~~~~~~~~i~~~~~~~~-~~~l 159 (235)
...+ .|...|++++|+|++++|++++.||.|++||+++++.... .....|...|.+++|+|+ +..|
T Consensus 92 ---~~~~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 92 ---LTTV-FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp ---EEEE-ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred ---EEEE-cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 2333 2667899999999999999999999999999998875311 223557788999999996 5789
Q ss_pred EEeCCCCcEEEEEcCCCceeeeecCC------------------CcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 160 VSGSGDGTLHAWNINTRNEVACWNGN------------------IGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 160 ~~~~~dg~i~v~d~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
++|+.||.| +||+++++.+..+..| ...|.+++|+|+|.+|++++ +.+++||++.++
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 999999999 9999999888777655 46799999999999999998 789999997654
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.6e-33 Score=211.50 Aligned_cols=209 Identities=14% Similarity=0.182 Sum_probs=172.4
Q ss_pred hhhhhhhhcccccceeEEEeec-CCCeeEEEeccceEEEEecCcceeeeeee-------------ccCC--ceEEEcC-C
Q 026679 3 DNRILRYFKGHKERVISLCMSP-VNDSFMSGSLDHSVRIWDLRVNACQGILR-------------LRGR--PTVAFDQ-Q 65 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-------------~~~~--~~~~~~~-~ 65 (235)
.++....+++|.+.|++++|+| ++++|++|+.||.|++||+.++.....+. .+.. ..++|+| +
T Consensus 32 ~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 111 (408)
T 4a11_B 32 LNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD 111 (408)
T ss_dssp ECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC
T ss_pred cCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC
Confidence 3455667789999999999999 99999999999999999999876655543 2333 3499999 7
Q ss_pred CCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccC---CCeEEEecCCCcEEEEEcCCCceeeeeccCC
Q 026679 66 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND---GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP 142 (235)
Q Consensus 66 ~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 142 (235)
+.+|++++.||.|++||+.+.+. .....+...+.++.++|. +.++++++.++.|++||+++++....+. .
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~ 184 (408)
T 4a11_B 112 TGMFTSSSFDKTLKVWDTNTLQT-----ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ--G 184 (408)
T ss_dssp TTCEEEEETTSEEEEEETTTTEE-----EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC--C
T ss_pred CcEEEEEeCCCeEEEeeCCCCcc-----ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec--C
Confidence 78999999999999999987653 222236678999999984 4489999999999999999988776654 4
Q ss_pred CCCcceeeEEeCCCc-EEEEeCCCCcEEEEEcCCCc-eeeee---------------cCCCcceeEEEeecCCCEEEEcc
Q 026679 143 SPNTNTEATFTPDGQ-YVVSGSGDGTLHAWNINTRN-EVACW---------------NGNIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 143 ~~~~i~~~~~~~~~~-~l~~~~~dg~i~v~d~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~ 205 (235)
|...|.+++|+|+++ +|++++.||.|++||++++. .+..+ ..|...|.+++|+|++.+|++++
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 556799999999998 58899999999999998765 23332 56888999999999999999997
Q ss_pred --cceEEeeCCCCCC
Q 026679 206 --SVLSFWIPNPSSN 218 (235)
Q Consensus 206 --~~i~iw~~~~~~~ 218 (235)
+.+++|++.....
T Consensus 265 ~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 265 TDNRMRLWNSSNGEN 279 (408)
T ss_dssp TTSCEEEEETTTCCB
T ss_pred CCCeEEEEECCCCcc
Confidence 7899999987654
No 85
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=215.53 Aligned_cols=206 Identities=14% Similarity=0.243 Sum_probs=174.8
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCc----ceeeeeeeccCC--ceEEEcCC-CCEEEEEecCCeEEEEecc
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRV----NACQGILRLRGR--PTVAFDQQ-GLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~----~~~~~~~~~~~~--~~~~~~~~-~~~l~~~~~dg~v~i~d~~ 84 (235)
.|...|++++|+|++++|++++.||.|++||+.+ .+....+..|.. ..++|+|+ +++|++++.||.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5889999999999999999999999999999987 346666766654 44999998 8999999999999999998
Q ss_pred CCCCC-----CceeEeecCCCcceeEEEEccC-CCeEEEecCCCcEEEEEcCCCceeeeeccCC----CCCcceeeEEeC
Q 026679 85 SYDKG-----PFDTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP----SPNTNTEATFTP 154 (235)
Q Consensus 85 ~~~~~-----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----~~~~i~~~~~~~ 154 (235)
+.+.. .........|...|.+++|+|+ +..|++++.|+.|++||+++++....+..+. +...+.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 86511 1112233568889999999998 7889999999999999999998887776542 157799999999
Q ss_pred CC-cEEEEeCCCC---cEEEEEcCCC-ceeeeec-CCCcceeEEEeec-CCCEEEEcc--cceEEeeCCCCC
Q 026679 155 DG-QYVVSGSGDG---TLHAWNINTR-NEVACWN-GNIGVVACLKWAP-RRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 155 ~~-~~l~~~~~dg---~i~v~d~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
++ .+|++++.|+ .|++||++++ +.+..+. +|...|.+++|+| ++.+|++++ +.+++|+++..+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc
Confidence 97 6899999998 9999999986 6677777 8999999999999 899999997 789999997654
No 86
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=211.75 Aligned_cols=194 Identities=10% Similarity=0.026 Sum_probs=161.6
Q ss_pred EeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEEeccCC------CCCCceeE
Q 026679 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSY------DKGPFDTF 94 (235)
Q Consensus 21 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~------~~~~~~~~ 94 (235)
.+.+++.+|++|+.||+|++||+.+++.+..+.......+.++|+ +++++.|+.+++|+.... ........
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 445678899999999999999999999888887666666888888 999999999999987631 11111222
Q ss_pred eecCCCcceeEEEEcc--CCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEE
Q 026679 95 LVGGDTAEVCDIKFSN--DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172 (235)
Q Consensus 95 ~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 172 (235)
....|...|.+++|+| +++++++++.|+.|++||+++++....... .+...+.+++|+|++++|++|+.||.|++||
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~-~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA-KSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC-CSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec-CCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 3345668899999999 999999999999999999999888654433 3445699999999999999999999999999
Q ss_pred cCCCcee-eeecC-CCcceeEEEeecCCCEEEEcc-cceEEeeCCCCCC
Q 026679 173 INTRNEV-ACWNG-NIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSSN 218 (235)
Q Consensus 173 ~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~~~ 218 (235)
+++++.+ ..+.. |..+|.+++|+|++.+|++++ +.+++||++....
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVG 247 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTT
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCc
Confidence 9999887 77887 999999999999999999998 7899999987644
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=219.30 Aligned_cols=211 Identities=13% Similarity=0.273 Sum_probs=168.8
Q ss_pred hhhhhcccc------------cceeEEEeecCC--CeeEEEeccceEEEEecCcceee----------------------
Q 026679 6 ILRYFKGHK------------ERVISLCMSPVN--DSFMSGSLDHSVRIWDLRVNACQ---------------------- 49 (235)
Q Consensus 6 ~~~~~~~h~------------~~v~~~~~~~~~--~~l~s~~~d~~i~vwd~~~~~~~---------------------- 49 (235)
++..+++|. +.|++++|+|++ ..|++++.|++|++||+.++...
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred EecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 466788998 889999999998 78999999999999999765432
Q ss_pred -----------------ee-eeccC--CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeE-----eecCCCccee
Q 026679 50 -----------------GI-LRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF-----LVGGDTAEVC 104 (235)
Q Consensus 50 -----------------~~-~~~~~--~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~-----~~~~~~~~v~ 104 (235)
.. ...|. +..++|+|++++|++| .|+.|++||++.... ..... .+..|...|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~ 230 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVIT 230 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEE
T ss_pred EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceE
Confidence 11 12343 3459999999999998 899999999984321 00011 2557889999
Q ss_pred EEEEccCC-CeEEEecCCCcEEEEEcCCCce----eeeeccCCC----------CCcceeeEEeCCCcEEEEeCCCCcEE
Q 026679 105 DIKFSNDG-KSMLLTTTNNNIYVLDAYGGEK----RCGFSLEPS----------PNTNTEATFTPDGQYVVSGSGDGTLH 169 (235)
Q Consensus 105 ~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~----------~~~i~~~~~~~~~~~l~~~~~dg~i~ 169 (235)
+++|+|++ +.|++++.|+.|++||+++++. ...+..+.. ...|.+++|+|++++|++++. +.|+
T Consensus 231 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~ 309 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVK 309 (447)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEE
T ss_pred EEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEE
Confidence 99999998 9999999999999999998876 444443321 027999999999999999998 9999
Q ss_pred EEEcCC-CceeeeecCCCcc---------------eeEEEeecCCCEEEEcc--cceEEeeCCCCCCC
Q 026679 170 AWNINT-RNEVACWNGNIGV---------------VACLKWAPRRAMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 170 v~d~~~-~~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
+||+++ ++.+..+.+|... +..++|+|++.+|++++ +.|++||+++.+..
T Consensus 310 iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 310 VWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp EEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred EEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 999997 8888888888542 23499999999999998 78999999876543
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-33 Score=230.31 Aligned_cols=212 Identities=14% Similarity=0.246 Sum_probs=178.3
Q ss_pred hhhhhhhhcccccceeEEEeecC--CCeeEEEeccceEEEEecCcce--eeeeeeccCCce--EEEcCC--CCEEEEEec
Q 026679 3 DNRILRYFKGHKERVISLCMSPV--NDSFMSGSLDHSVRIWDLRVNA--CQGILRLRGRPT--VAFDQQ--GLVFAVAME 74 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~~--~~~~~~--~~~l~~~~~ 74 (235)
+++.+..+.+|.++|++++|+|+ +++|++|+.||.|++||+.+++ ....+..+...+ ++|+|+ +..+++++.
T Consensus 42 ~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~ 121 (753)
T 3jro_A 42 THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS 121 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC
Confidence 34567788899999999999988 8999999999999999999886 556666565444 999999 999999999
Q ss_pred CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEcc-------------CCCeEEEecCCCcEEEEEcCCCcee--eeec
Q 026679 75 AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-------------DGKSMLLTTTNNNIYVLDAYGGEKR--CGFS 139 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~ 139 (235)
||.|++||+++..... ......|...|.+++|+| ++..+++++.||.|++||++++... ....
T Consensus 122 dg~I~vwdl~~~~~~~--~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~ 199 (753)
T 3jro_A 122 DGKVSVVEFKENGTTS--PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 199 (753)
T ss_dssp TSEEEEEECCSSSCCC--CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEeecCCCcc--eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee
Confidence 9999999998864322 345567889999999999 5899999999999999999877432 2233
Q ss_pred cCCCCCcceeeEEeCC---CcEEEEeCCCCcEEEEEcCCCc-----eeeeecCCCcceeEEEeecCCCEEEEcc--cceE
Q 026679 140 LEPSPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRN-----EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLS 209 (235)
Q Consensus 140 ~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~ 209 (235)
...|...|.+++|+|+ +++|++++.||.|++||+++++ .......|...|++++|+|++.++++++ |.++
T Consensus 200 ~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~ 279 (753)
T 3jro_A 200 LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT 279 (753)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEE
T ss_pred ecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEE
Confidence 4566788999999999 9999999999999999998864 3344456888999999999999999987 7899
Q ss_pred EeeCCCC
Q 026679 210 FWIPNPS 216 (235)
Q Consensus 210 iw~~~~~ 216 (235)
+|+++..
T Consensus 280 vwd~~~~ 286 (753)
T 3jro_A 280 LWKENLE 286 (753)
T ss_dssp CCBCCSS
T ss_pred EEecCCC
Confidence 9999753
No 89
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.2e-33 Score=215.85 Aligned_cols=209 Identities=14% Similarity=0.115 Sum_probs=155.6
Q ss_pred hhhhhcccccceeEEEeec--------CCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCC-CEEEEEec
Q 026679 6 ILRYFKGHKERVISLCMSP--------VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQG-LVFAVAME 74 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~--------~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~-~~l~~~~~ 74 (235)
.+..+++|.+.|++++|+| ++++||+++.|++|+|||+.++.....+..+...+ ++|+|++ .+|++++.
T Consensus 128 ~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~ 207 (393)
T 4gq1_A 128 VLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER 207 (393)
T ss_dssp EECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET
T ss_pred eecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC
Confidence 3456889999999999998 78899999999999999998887776666655444 9999987 47999999
Q ss_pred CCeEEEEeccCCCCCCce---------------------eEeecCCCcceeEEEEc-cCCCeEEEecCCCcEEEEEcCCC
Q 026679 75 AGAIKLFDSRSYDKGPFD---------------------TFLVGGDTAEVCDIKFS-NDGKSMLLTTTNNNIYVLDAYGG 132 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~---------------------~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~ 132 (235)
|+.|++||+++.+..... .....+|...+.++.|+ |+++.+++++.|+.+++||+..+
T Consensus 208 d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 208 NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 999999999876532110 11123567788899987 79999999999999999999876
Q ss_pred ceeeeeccCCC----------------CCcceeeEEeC--CCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEe
Q 026679 133 EKRCGFSLEPS----------------PNTNTEATFTP--DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKW 194 (235)
Q Consensus 133 ~~~~~~~~~~~----------------~~~i~~~~~~~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 194 (235)
+....+..+.. ........|+| ++.++++|+.||.|++||+.+++....+..|..+|.+++|
T Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svaf 367 (393)
T 4gq1_A 288 NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCW 367 (393)
T ss_dssp ----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEE
T ss_pred CCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEE
Confidence 65443321110 01122334444 4557788999999999999999998888889999999999
Q ss_pred ecCCCEEEEcc-cceEEeeCC
Q 026679 195 APRRAMFVAAS-SVLSFWIPN 214 (235)
Q Consensus 195 ~~~~~~l~~~~-~~i~iw~~~ 214 (235)
+|||++|++++ +.+.+|.+.
T Consensus 368 spdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 368 HQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp CTTSSEEEEEESSEEEEEEEG
T ss_pred cCCCCEEEEEeCCCeEEEEEe
Confidence 99999999998 667777664
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.7e-33 Score=237.89 Aligned_cols=210 Identities=20% Similarity=0.301 Sum_probs=186.3
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcC--CCCEEEEEecCCe
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQ--QGLVFAVAMEAGA 77 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~--~~~~l~~~~~dg~ 77 (235)
.+++.+..+++|.+.|.+++|+|++++|++++.|++|++||+.+++.+..+..|...+ ++|+| ++.++++++.|+.
T Consensus 645 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 645 ETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSC
T ss_pred CCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCe
Confidence 4567788899999999999999999999999999999999999999999998887655 88999 5568999999999
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeecc-----------------
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL----------------- 140 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~----------------- 140 (235)
|++||+.++.. ...+.+|...|.+++|+|+++.+++++.||.|++||+++++....+..
T Consensus 725 v~vwd~~~~~~----~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 725 LKLWDLNQKEC----RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp EEEEETTSSSE----EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred EEEEECCCcch----hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 99999988664 666778999999999999999999999999999999987654433211
Q ss_pred ------------------------------------CCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecC
Q 026679 141 ------------------------------------EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG 184 (235)
Q Consensus 141 ------------------------------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~ 184 (235)
..+...+.+++|+|+++++++++.||.|++||+.++..+..+.+
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 880 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG 880 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC
Confidence 13456788999999999999999999999999999999999999
Q ss_pred CCcceeEEEeecCCCEEEEcc--cceEEeeCCC
Q 026679 185 NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~ 215 (235)
|...|.+++|+|++.++++++ +.+++|++..
T Consensus 881 h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred CccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 999999999999999999998 7899999753
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-32 Score=209.66 Aligned_cols=200 Identities=17% Similarity=0.322 Sum_probs=166.3
Q ss_pred ccccceeEEEeecCCC-eeEEEeccceEEEEec----Ccce------eeeeeec----------cC--CceEEEcCCCCE
Q 026679 12 GHKERVISLCMSPVND-SFMSGSLDHSVRIWDL----RVNA------CQGILRL----------RG--RPTVAFDQQGLV 68 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~----~~~~------~~~~~~~----------~~--~~~~~~~~~~~~ 68 (235)
.|.+.|++++|+|+++ +|++++.|+.|++||+ .+++ ....+.. +. +.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 3558999999999999 9999999999999999 8777 3444433 23 344999999999
Q ss_pred EEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeec---------
Q 026679 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS--------- 139 (235)
Q Consensus 69 l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--------- 139 (235)
|++++.||.|++||. ++. ....+..|...|.+++|+|++++|++++.|+.|++||+.+++....+.
T Consensus 123 l~~~~~dg~i~i~~~-~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 123 IVTGVENGELRLWNK-TGA----LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEETTSCEEEEET-TSC----EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEeCCCeEEEEeC-CCC----eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 999999999999993 222 255677899999999999999999999999999999998776554332
Q ss_pred ---------------------------------------------cCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcC
Q 026679 140 ---------------------------------------------LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN 174 (235)
Q Consensus 140 ---------------------------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~ 174 (235)
...+...+.+++|+|++++|++++.||.|++||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 12345678999999999999999999999999999
Q ss_pred CCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 175 TRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+++.+..+..|...|.+++|+|++ ++++++ +.+++|+++...
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 999999999999999999999999 777776 889999997654
No 92
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-32 Score=213.48 Aligned_cols=209 Identities=15% Similarity=0.285 Sum_probs=180.4
Q ss_pred chhhhhhhhcccccceeEEEeec--CCCeeEEEeccceEEEEecCccee-----------------------eeeeeccC
Q 026679 2 YDNRILRYFKGHKERVISLCMSP--VNDSFMSGSLDHSVRIWDLRVNAC-----------------------QGILRLRG 56 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd~~~~~~-----------------------~~~~~~~~ 56 (235)
++++.+..+.+|.+.|.+++|++ ++.++++++.|++|++||+.++.. ...+..+.
T Consensus 191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 46777888999999999999994 678999999999999999987653 33455666
Q ss_pred CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceee
Q 026679 57 RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRC 136 (235)
Q Consensus 57 ~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 136 (235)
..+.+++++++.+++++.||.|++||+++.+. ...+.+|...|.+++|+|+++.+++++.|+.|++||+++++.+.
T Consensus 271 ~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 271 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKC----LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTTEE----EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ceEEEEcCCCCEEEEEeCCCeEEEEECCCCcE----EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 67778899999999999999999999987654 56677899999999999999999999999999999999998887
Q ss_pred eeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCC
Q 026679 137 GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNP 215 (235)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~ 215 (235)
.+. .|...+.+++|+ +++|++++.||.|++||+++++...... +...+..++|+|++.++++++ +.+++||+++
T Consensus 347 ~~~--~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 347 TLQ--GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp EEC--CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred EEe--CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 665 455679999997 5799999999999999999888766654 667788899999999999998 8899999987
Q ss_pred CCCC
Q 026679 216 SSNS 219 (235)
Q Consensus 216 ~~~~ 219 (235)
++..
T Consensus 422 g~~~ 425 (464)
T 3v7d_B 422 GKLV 425 (464)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 7654
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-32 Score=212.33 Aligned_cols=201 Identities=10% Similarity=0.110 Sum_probs=169.6
Q ss_pred cccccceeEEEeecCCCee-EEEeccceEEEEecC--cceeeeeeec--cCC--ceEEEcCCCCEEEEEecCCeEEEEec
Q 026679 11 KGHKERVISLCMSPVNDSF-MSGSLDHSVRIWDLR--VNACQGILRL--RGR--PTVAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 11 ~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~--~~~~~~~~~~--~~~--~~~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
.+|.+.|++++|+|++++| ++++.||.|++||+. +++....+.. +.. ..++|+|++++|++++.+|.+++|++
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 4677789999999999996 899999999999998 7887777753 233 34999999999999999999999999
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccC---CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEE
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSND---GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV 160 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 160 (235)
.+..........+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+ ...|...|.+++|+ ++++|+
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW-LFGHKHFVSSICCG-KDYLLL 256 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE-CCCCSSCEEEEEEC-STTEEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee-ecCCCCceEEEEEC-CCCEEE
Confidence 8766432122245578899999999999 999999999999999999988876653 34566789999999 999999
Q ss_pred EeCCCCcEEEEEcCCCceeeeecC-------------------------CCcceeEEEeecCCCEEEEcc---cceEEee
Q 026679 161 SGSGDGTLHAWNINTRNEVACWNG-------------------------NIGVVACLKWAPRRAMFVAAS---SVLSFWI 212 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~~~-------------------------~~~~v~~~~~~~~~~~l~~~~---~~i~iw~ 212 (235)
+++.|+.|++||+++++.+..+.. ....|.+++|+|++++|++++ +.+++|+
T Consensus 257 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 257 SAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp EEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 999999999999999998777752 234689999999999998875 6699999
Q ss_pred C
Q 026679 213 P 213 (235)
Q Consensus 213 ~ 213 (235)
+
T Consensus 337 ~ 337 (450)
T 2vdu_B 337 M 337 (450)
T ss_dssp E
T ss_pred e
Confidence 9
No 94
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-34 Score=223.50 Aligned_cols=202 Identities=13% Similarity=0.114 Sum_probs=159.6
Q ss_pred hhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcce-eeeeeeccCCce--E--EEcCCC-CEEEEEecCCeEEEE
Q 026679 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-CQGILRLRGRPT--V--AFDQQG-LVFAVAMEAGAIKLF 81 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-~~~~~~~~~~~~--~--~~~~~~-~~l~~~~~dg~v~i~ 81 (235)
..+.+|...|++++|+++ ..|++|+.||+|++||++++. +...+..|...+ + +++|++ .+|++++.|++|++|
T Consensus 260 ~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklW 338 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIF 338 (524)
T ss_dssp EEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEE
T ss_pred EEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEE
Confidence 467889999999999986 589999999999999998764 445577776655 5 467787 899999999999999
Q ss_pred eccCCCCCCceeEeecCCC--cceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEE
Q 026679 82 DSRSYDKGPFDTFLVGGDT--AEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV 159 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 159 (235)
|+++.+. ...+.+|. ..|.+++|+|+++.+++++.|+.|++||++++.....+. .|...|.+++|+|+|++|
T Consensus 339 D~~~~~~----~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~--gH~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 339 NPKDIAT----TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV--SRETTITAIGVSRLHPMV 412 (524)
T ss_dssp CGGGHHH----HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE--ECSSCEEEEECCSSCCBC
T ss_pred ECCCCCc----ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee--cCCCceEEEEeCCCCCeE
Confidence 9987543 11222333 347899999999999999999999999999988766555 466779999999999999
Q ss_pred EEeCCCCcEEEEEcCCC--------------------------------------------ceeeeecCCCcceeEEEee
Q 026679 160 VSGSGDGTLHAWNINTR--------------------------------------------NEVACWNGNIGVVACLKWA 195 (235)
Q Consensus 160 ~~~~~dg~i~v~d~~~~--------------------------------------------~~~~~~~~~~~~v~~~~~~ 195 (235)
++|+.||+|++||+... ..+..+.+|...|.+++|+
T Consensus 413 ~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafs 492 (524)
T 2j04_B 413 LAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWN 492 (524)
T ss_dssp EEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEEC
T ss_pred EEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECC
Confidence 99999999999985311 1122334577889999999
Q ss_pred cCCC---EEEEcc--cceEEeeCCCC
Q 026679 196 PRRA---MFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 196 ~~~~---~l~~~~--~~i~iw~~~~~ 216 (235)
|++. .+++|+ |.|+||++...
T Consensus 493 p~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 493 ETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCCccHHHHhhccCceEEEEEcccc
Confidence 9964 888887 88999998764
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=212.86 Aligned_cols=193 Identities=13% Similarity=0.132 Sum_probs=157.4
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC-------CceEEEcCCCCEEEEEecCCeEEEEecc
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG-------RPTVAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
.|...|.+++|+|+|++||+++.||.|++||.+. ....+. +. ..+++|+|+|++|++|+.||+|++||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5688999999999999999999999999999544 555555 44 3349999999999999999999999998
Q ss_pred CCCCCCc---eeEee----cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee---eeeccCCCCCcceeeEEeC
Q 026679 85 SYDKGPF---DTFLV----GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR---CGFSLEPSPNTNTEATFTP 154 (235)
Q Consensus 85 ~~~~~~~---~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---~~~~~~~~~~~i~~~~~~~ 154 (235)
++..... ....+ .+|...|.+++|+|+| +++++.|+.|++||+..++.. ..+. ..|...|.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~svaFs- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKITDLKIV- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCCCEEEE-
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEEEEEEE-
Confidence 8642111 22332 6678899999999999 888999999999999887742 2232 2455679999999
Q ss_pred CCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEe--ecCCCEEEEcc--cceEEeeCC
Q 026679 155 DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKW--APRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 155 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~--~~i~iw~~~ 214 (235)
|+.||+++ ++.|++||+.+++......+|...|..++| +|++..+++++ |. ++|..+
T Consensus 236 -g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred -CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 68999887 699999999887774444479999999999 99999999998 66 899886
No 96
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.9e-32 Score=200.30 Aligned_cols=193 Identities=11% Similarity=0.081 Sum_probs=143.7
Q ss_pred cceeEEEeecC----CCeeEEEec--------------------cceEEEEec-CcceeeeeeeccC--CceEEEcC---
Q 026679 15 ERVISLCMSPV----NDSFMSGSL--------------------DHSVRIWDL-RVNACQGILRLRG--RPTVAFDQ--- 64 (235)
Q Consensus 15 ~~v~~~~~~~~----~~~l~s~~~--------------------d~~i~vwd~-~~~~~~~~~~~~~--~~~~~~~~--- 64 (235)
+.|.+++++|+ ++.+++++. |+.|++|++ .+++.+..+..+. ..+++|++
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 46677777777 667776553 888888888 4466666655554 45588888
Q ss_pred CCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCC---cceeEEEEccCCCeE------------EEecCCCcEEEEEc
Q 026679 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT---AEVCDIKFSNDGKSM------------LLTTTNNNIYVLDA 129 (235)
Q Consensus 65 ~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~i~~~d~ 129 (235)
++..|++++.|++|++||+++++. ...+.+|. ..+.+++|+|+|..+ ++|+.|++|++||.
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~----l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQL----LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINP 267 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCE----EEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEET
T ss_pred CCceEEEecCCCcEEEEECCCCcE----EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence 779999999999999999998774 44444433 467788999999876 45778999999999
Q ss_pred CCCceeeeecc---CCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCccee-EEEeecCCCEEEEcc
Q 026679 130 YGGEKRCGFSL---EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVA-CLKWAPRRAMFVAAS 205 (235)
Q Consensus 130 ~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~ 205 (235)
.+++.+..+.. .+|...+. ..+.++.++++++.|++|++||+.+++.+.++.+|...+. .++|+|||++|++|+
T Consensus 268 ~tgk~l~v~~~~~p~Gh~~~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPGQAGRFL--EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp TTTEEEEEEEECCCTTCCCCEE--EEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred CCCEEEEEEEeeccCCCcceeE--ccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 99987765431 23433333 3333478999999999999999999999999998877655 589999999999998
Q ss_pred --cceEEeeC
Q 026679 206 --SVLSFWIP 213 (235)
Q Consensus 206 --~~i~iw~~ 213 (235)
++|+||++
T Consensus 346 ~D~TIklWd~ 355 (356)
T 2w18_A 346 KDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcEEEecC
Confidence 88999986
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-33 Score=214.67 Aligned_cols=202 Identities=15% Similarity=0.208 Sum_probs=164.4
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecC---cceeeeeeeccC------------Cce--EE--EcCCCCEEEEE
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR---VNACQGILRLRG------------RPT--VA--FDQQGLVFAVA 72 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~---~~~~~~~~~~~~------------~~~--~~--~~~~~~~l~~~ 72 (235)
+|...|++++|+|++++|++++.||.|++||++ .++.......+. ..+ +. +++++.+++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 589999999999999999999999999999995 444444333221 112 33 55789999999
Q ss_pred ecCCeEEEEeccCCCCCCceeEeecC--CCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceee
Q 026679 73 MEAGAIKLFDSRSYDKGPFDTFLVGG--DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEA 150 (235)
Q Consensus 73 ~~dg~v~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~ 150 (235)
+.||.|++||+++.+. ...+.. |...|.+++|+|++++|++++.||.|++||+++++.+..+... +...|.++
T Consensus 189 ~~d~~i~iwd~~~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~ 263 (437)
T 3gre_A 189 TNLSRVIIFDIRTLER----LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG-DHAPITHV 263 (437)
T ss_dssp ETTSEEEEEETTTCCE----EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT-TCEEEEEE
T ss_pred eCCCeEEEEeCCCCee----eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC-CCCceEEE
Confidence 9999999999988664 444545 7889999999999999999999999999999999888776543 44579999
Q ss_pred EEe----CCCcEEEEeCCCCcEEEEEcCCCceeeeecC--------------------------CCcceeEEEeecCCCE
Q 026679 151 TFT----PDGQYVVSGSGDGTLHAWNINTRNEVACWNG--------------------------NIGVVACLKWAPRRAM 200 (235)
Q Consensus 151 ~~~----~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--------------------------~~~~v~~~~~~~~~~~ 200 (235)
+|+ |++.+|++++.||.|++||+++++.+..+.+ |...|.+++|+ ++.+
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~ 342 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKI 342 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceE
Confidence 554 5788999999999999999998887766653 55668899999 7788
Q ss_pred EEEcc--cceEEeeCCCCCCC
Q 026679 201 FVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 201 l~~~~--~~i~iw~~~~~~~~ 219 (235)
|++++ +.|++||+...+..
T Consensus 343 l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 343 LLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp EEEEGGGTEEEEEETTCGGGC
T ss_pred EEecCCCCeEEEEECCCcccc
Confidence 98887 88999999876543
No 98
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2e-32 Score=211.51 Aligned_cols=205 Identities=14% Similarity=0.215 Sum_probs=170.5
Q ss_pred hhcccccceeEEEeecC-CCeeEEEeccceEEEEecCc----------ceeeeeeeccCCc--eEEEcCCCC-EEEEEec
Q 026679 9 YFKGHKERVISLCMSPV-NDSFMSGSLDHSVRIWDLRV----------NACQGILRLRGRP--TVAFDQQGL-VFAVAME 74 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~----------~~~~~~~~~~~~~--~~~~~~~~~-~l~~~~~ 74 (235)
...+|.+.|++++|+|+ +.+|++++.||.|++||+.. ......+..|... .++|+|++. +|++|+.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 34579999999999997 67899999999999999986 4666677777654 499999988 9999999
Q ss_pred CCeEEEEeccCCCCCCce---eEeecCCCcceeEEEEcc-CCCeEEEecCCCcEEEEEcCCC---ceeeeeccCCCCCcc
Q 026679 75 AGAIKLFDSRSYDKGPFD---TFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGG---EKRCGFSLEPSPNTN 147 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~---~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~i 147 (235)
||.|++||+......... ......|...|.+++|+| ++..|++++.|+.|++||++++ +....+ ..|...|
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~--~~~~~~v 280 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV--DAHTAEV 280 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE--ECCSSCE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe--ecCCCCe
Confidence 999999999874321111 234567889999999999 6788889999999999999987 344433 3556779
Q ss_pred eeeEEeCCCc-EEEEeCCCCcEEEEEcCC-CceeeeecCCCcceeEEEeecCCC-EEEEcc--cceEEeeCCC
Q 026679 148 TEATFTPDGQ-YVVSGSGDGTLHAWNINT-RNEVACWNGNIGVVACLKWAPRRA-MFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 148 ~~~~~~~~~~-~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~~i~iw~~~~ 215 (235)
++++|+|+++ +|++|+.||.|++||+++ ...+..+..|...|.+++|+|++. +|++++ +.|++|++..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 9999999887 688999999999999998 567888889999999999999985 577776 7899999976
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.9e-33 Score=209.42 Aligned_cols=200 Identities=13% Similarity=0.215 Sum_probs=167.0
Q ss_pred ccccceeEEEeecC---CCeeEEEeccceEEEEecCcce-eeeeeeccCCce--E------EEcCCCCEEEEEecCCeEE
Q 026679 12 GHKERVISLCMSPV---NDSFMSGSLDHSVRIWDLRVNA-CQGILRLRGRPT--V------AFDQQGLVFAVAMEAGAIK 79 (235)
Q Consensus 12 ~h~~~v~~~~~~~~---~~~l~s~~~d~~i~vwd~~~~~-~~~~~~~~~~~~--~------~~~~~~~~l~~~~~dg~v~ 79 (235)
+|..+|.+++|+|+ +++|++++.||.|++||+.+++ ....+..|...+ + +|+|+++.|++++.||.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 78999999999998 6999999999999999999887 778888777655 5 3578999999999999999
Q ss_pred EEeccCCCCCCceeEeecCC----CcceeEEE----EccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeE
Q 026679 80 LFDSRSYDKGPFDTFLVGGD----TAEVCDIK----FSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEAT 151 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~----~~~v~~~~----~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 151 (235)
+||+++.... ...+..+ ...+.+++ |+|+++++++++.|+.|++||+++++..... .+...+.+++
T Consensus 143 vwd~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~v~~~~ 216 (357)
T 3i2n_A 143 VWDPRQKDDP---VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET---NIKNGVCSLE 216 (357)
T ss_dssp EECTTSCSSC---SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEE
T ss_pred EEeCCCCCCc---ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec---CCCCceEEEE
Confidence 9999886521 2222222 34788888 7889999999999999999999998875442 3446799999
Q ss_pred EeC---CCcEEEEeCCCCcEEEEEcCCCceeeeec-----CCCcceeEEEeecCCC-EEEEcc--cceEEeeCCCCC
Q 026679 152 FTP---DGQYVVSGSGDGTLHAWNINTRNEVACWN-----GNIGVVACLKWAPRRA-MFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 152 ~~~---~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~-~l~~~~--~~i~iw~~~~~~ 217 (235)
|+| ++++|++++.||.|++||+++++.+..+. +|...|.+++|+|++. ++++++ +.+++|+++...
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 999 99999999999999999999887766655 8999999999999998 788887 789999997544
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-32 Score=199.74 Aligned_cols=203 Identities=17% Similarity=0.219 Sum_probs=171.5
Q ss_pred hhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcC-CCCEEEEEecCCeEEE
Q 026679 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQ-QGLVFAVAMEAGAIKL 80 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~-~~~~l~~~~~dg~v~i 80 (235)
++.+..+.+|...|.+++| ++++|++++.|+.|++|| .++....+..+...+ +++.| +++.+++++.||.+++
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 169 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKL 169 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEE
Confidence 3556778899999999999 478999999999999999 666777777766555 77777 9999999999999999
Q ss_pred EeccCCCCCCceeEeecC-CCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEE
Q 026679 81 FDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV 159 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 159 (235)
||... ....+.. |...+.+++|+|++. +++++.|+.|++||+++++.+..+.. |...+.+++|+|++ .|
T Consensus 170 ~d~~~------~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l 239 (313)
T 3odt_A 170 WQNDK------VIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG--HESFVYCIKLLPNG-DI 239 (313)
T ss_dssp EETTE------EEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTS-CE
T ss_pred EecCc------eEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc--CCceEEEEEEecCC-CE
Confidence 99332 1333444 888999999999998 99999999999999999988877654 45679999999999 58
Q ss_pred EEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCCCCCC
Q 026679 160 VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSSNST 220 (235)
Q Consensus 160 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~~~~~ 220 (235)
++++.||.|++||+++++.+..+..|...|.+++|+|++++++++. +.+++|+++......
T Consensus 240 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 240 VSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp EEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC
T ss_pred EEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceee
Confidence 8999999999999999999999999999999999999999665554 889999998765443
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.2e-32 Score=219.53 Aligned_cols=204 Identities=16% Similarity=0.283 Sum_probs=178.6
Q ss_pred hhhhhhcccccc-eeEEEeec--CCCeeEEEeccceEEEEecCcc--------eeeeeeeccCCce--EEEcCCCCEEEE
Q 026679 5 RILRYFKGHKER-VISLCMSP--VNDSFMSGSLDHSVRIWDLRVN--------ACQGILRLRGRPT--VAFDQQGLVFAV 71 (235)
Q Consensus 5 ~~~~~~~~h~~~-v~~~~~~~--~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~~~~~--~~~~~~~~~l~~ 71 (235)
+.+..+.+|... |++++|+| ++++|++++.||.|++||+.++ .....+..+...+ ++|+|+++++++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 677889999999 99999999 9999999999999999999754 5666666665444 999999999999
Q ss_pred EecC----CeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCC-eEEEecCCCcEEEEEcCCCceeeeeccCCCCC-
Q 026679 72 AMEA----GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPN- 145 (235)
Q Consensus 72 ~~~d----g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~- 145 (235)
++.+ +.|.+||.. + ....+..|...|.+++|+|+++ .+++++.|+.|++||+.+++....+.. |..
T Consensus 134 ~~~~~~~~~~v~~~d~~--~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~--~~~~ 205 (615)
T 1pgu_A 134 VGEGRDNFGVFISWDSG--N----SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRT--HHKQ 205 (615)
T ss_dssp EECCSSCSEEEEETTTC--C----EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECS--SSCT
T ss_pred eccCCCCccEEEEEECC--C----cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecc--cCCC
Confidence 9988 789999832 2 2556778999999999999998 799999999999999999888776654 445
Q ss_pred --cceeeEEeCC-CcEEEEeCCCCcEEEEEcCCCceeeee-c---CCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 146 --TNTEATFTPD-GQYVVSGSGDGTLHAWNINTRNEVACW-N---GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 146 --~i~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
.|.+++|+|+ +++|++++.||.|++||+++++.+..+ . .|...|.+++|+ ++.+|++++ +.+++|+++..
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 206 GSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp TCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT
T ss_pred CceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC
Confidence 7999999999 999999999999999999999999888 5 899999999999 999999997 78999999865
Q ss_pred C
Q 026679 217 S 217 (235)
Q Consensus 217 ~ 217 (235)
+
T Consensus 285 ~ 285 (615)
T 1pgu_A 285 K 285 (615)
T ss_dssp E
T ss_pred c
Confidence 4
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.8e-32 Score=233.61 Aligned_cols=203 Identities=18% Similarity=0.272 Sum_probs=175.2
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEeccCC
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRSY 86 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~~ 86 (235)
.+.+|.+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|...+ ++|+|+++++++++.||.|++||+.++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 456899999999999999999999999999999999999999998877655 999999999999999999999999987
Q ss_pred CCCCceeEeecCCCcceeEEEEcc--CCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC
Q 026679 87 DKGPFDTFLVGGDTAEVCDIKFSN--DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 164 (235)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 164 (235)
+. ...+.+|...|.+++|+| ++..+++++.|+.|++||+++++....+. .|...|.+++|+|++++|++++.
T Consensus 690 ~~----~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 690 KL----VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp CE----EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC--CCSSCEEEEEECSSTTEEEEEES
T ss_pred ce----EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec--CCCCCEEEEEEecCCCEEEEEEC
Confidence 64 566778999999999999 55688999999999999999998876655 45677999999999999999999
Q ss_pred CCcEEEEEcCCCceeeee-------------------------------------------------------cCCCcce
Q 026679 165 DGTLHAWNINTRNEVACW-------------------------------------------------------NGNIGVV 189 (235)
Q Consensus 165 dg~i~v~d~~~~~~~~~~-------------------------------------------------------~~~~~~v 189 (235)
||.|++||+++++....+ .+|...|
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 999999999776543322 1566778
Q ss_pred eEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 190 ACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 190 ~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
.+++|+|++.++++++ +.+++|++++..
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~ 873 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRL 873 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 8888888888888887 778888887543
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.2e-32 Score=206.31 Aligned_cols=203 Identities=11% Similarity=0.104 Sum_probs=169.3
Q ss_pred hhhhcccccceeEEEeecCCC-eeEEEeccceEEEEec-Ccceeeeeeec--cCCc--eEEEcCCCCEEEEEecCCeEEE
Q 026679 7 LRYFKGHKERVISLCMSPVND-SFMSGSLDHSVRIWDL-RVNACQGILRL--RGRP--TVAFDQQGLVFAVAMEAGAIKL 80 (235)
Q Consensus 7 ~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~-~~~~~~~~~~~--~~~~--~~~~~~~~~~l~~~~~dg~v~i 80 (235)
...+.+|...|++++|+|+++ +|++++.||.|++||+ .+++. ..+.. +... .++|+| +..+++++.|+.|++
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~i 126 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEV 126 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEE
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEE
Confidence 345568999999999999999 9999999999999999 77755 45555 5544 489999 999999999999999
Q ss_pred EeccC---------CCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCC-CceeeeeccCCCCCcceee
Q 026679 81 FDSRS---------YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG-GEKRCGFSLEPSPNTNTEA 150 (235)
Q Consensus 81 ~d~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~i~~~ 150 (235)
||+++ .+. ...+ .|...+.+++|+|++ +++++.++.|++||+++ +..........+...+.++
T Consensus 127 wd~~~~~~~~~~~~~~~----~~~~-~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i 199 (342)
T 1yfq_A 127 IDPRNYGDGVIAVKNLN----SNNT-KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDV 199 (342)
T ss_dssp ECHHHHTTBCEEEEESC----SSSS-SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEE
T ss_pred EcccccccccccccCCe----eeEE-eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEE
Confidence 99986 432 1122 277899999999987 99999999999999998 6543333344566779999
Q ss_pred EEeC-CCcEEEEeCCCCcEEEEEcCCC------ceeeeecCCCc---------ceeEEEeecCCCEEEEcc--cceEEee
Q 026679 151 TFTP-DGQYVVSGSGDGTLHAWNINTR------NEVACWNGNIG---------VVACLKWAPRRAMFVAAS--SVLSFWI 212 (235)
Q Consensus 151 ~~~~-~~~~l~~~~~dg~i~v~d~~~~------~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~~i~iw~ 212 (235)
+|+| ++++|++++.||.|++|+++.. +....+..|.. .|.+++|+|++++|++++ +.+++||
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 9999 9999999999999999999876 77778877755 999999999999999987 7899999
Q ss_pred CCCCCC
Q 026679 213 PNPSSN 218 (235)
Q Consensus 213 ~~~~~~ 218 (235)
++..+.
T Consensus 280 ~~~~~~ 285 (342)
T 1yfq_A 280 LQTRKK 285 (342)
T ss_dssp TTTTEE
T ss_pred CccHhH
Confidence 986543
No 104
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=198.12 Aligned_cols=204 Identities=15% Similarity=0.200 Sum_probs=171.7
Q ss_pred hhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEE
Q 026679 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
.++++.+++|.+.|++++| |++++|++++.||.|++||+.+++....+..+...+ ++|+|+++.+++++.||.+++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3567789999999999999 899999999999999999999998888888776554 9999999999999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC-CCcEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVV 160 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~ 160 (235)
++...... .....+..|...|.+++| +++.+++++.|+.|++|| .++....+. .+...+.++.|.| ++++++
T Consensus 87 ~~~~~~~~-~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 87 PLFATSGE-DPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ--AHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp ETTCCTTS-CC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE--CCSSCEEEEEEEETTTTEEE
T ss_pred EeeecCCC-CcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc--cCCCceeEEEEccCCCCEEE
Confidence 99875432 224456788999999999 577999999999999999 555555444 4556799999998 999999
Q ss_pred EeCCCCcEEEEEcCCCceeeeecC-CCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 161 SGSGDGTLHAWNINTRNEVACWNG-NIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
+++.||.|++|| ..+....+.. |...+.+++|+|++. +++++ +.+++||++..+.
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCE
T ss_pred EEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhh
Confidence 999999999999 4556666666 889999999999998 66665 8899999986543
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.1e-32 Score=204.05 Aligned_cols=198 Identities=12% Similarity=0.098 Sum_probs=166.4
Q ss_pred hhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcce---eeeeeeccCCc--eEEEcCCCC-EEEEEecCCeEEEE
Q 026679 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA---CQGILRLRGRP--TVAFDQQGL-VFAVAMEAGAIKLF 81 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~~~~--~~~~~~~~~-~l~~~~~dg~v~i~ 81 (235)
....+|.+.|++++|+|++++|++++.|+.|++||+.++. ....+..+... +++|+|+++ +|++++.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3456899999999999999999999999999999998776 23334445443 499999999 99999999999999
Q ss_pred ec-cCCCCCCceeEeecC--CCcceeEEEEccCCCeEEEecCCCcEEEEEcCC---------CceeeeeccCCCCCccee
Q 026679 82 DS-RSYDKGPFDTFLVGG--DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG---------GEKRCGFSLEPSPNTNTE 149 (235)
Q Consensus 82 d~-~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---------~~~~~~~~~~~~~~~i~~ 149 (235)
|+ .+.. ...+.. |...|.+++|+| ++.+++++.|+.|++||+++ ++....+. +...+.+
T Consensus 85 d~~~~~~-----~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~v~~ 155 (342)
T 1yfq_A 85 DLIGSPS-----FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---VKNKIFT 155 (342)
T ss_dssp CSSSSSS-----EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---SCCCEEE
T ss_pred EeccCCc-----eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---eCCceEE
Confidence 99 7654 355667 899999999999 99999999999999999987 65554443 5577999
Q ss_pred eEEeCCCcEEEEeCCCCcEEEEEcCC-Cce--eeeecCCCcceeEEEeec-CCCEEEEcc--cceEEeeCCCC
Q 026679 150 ATFTPDGQYVVSGSGDGTLHAWNINT-RNE--VACWNGNIGVVACLKWAP-RRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 150 ~~~~~~~~~l~~~~~dg~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~~i~iw~~~~~ 216 (235)
++|+|++ +++++.|+.|++||+++ +.. ......|...+.+++|+| ++.++++++ +.+++|+++..
T Consensus 156 ~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 156 MDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred EEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 9999987 89999999999999988 543 234456788999999999 999999998 78999999765
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-31 Score=206.51 Aligned_cols=204 Identities=19% Similarity=0.286 Sum_probs=176.7
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
.+++.+..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.+..+..+...+.++..++..+++++.||.|++|
T Consensus 161 ~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vw 238 (435)
T 1p22_A 161 NTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 238 (435)
T ss_dssp SSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEE
T ss_pred CCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEE
Confidence 456777888999999999999 678999999999999999999999999988887775555567799999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 161 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (235)
|+.+.... .......+|...|.+++| +++++++++.||.|++||+++++.+..+.. |...+.++.+ +++++++
T Consensus 239 d~~~~~~~-~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~ 311 (435)
T 1p22_A 239 DMASPTDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNG--HKRGIACLQY--RDRLVVS 311 (435)
T ss_dssp ECSSSSCC-EEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEE--ETTEEEE
T ss_pred eCCCCCCc-eeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcC--CCCcEEEEEe--CCCEEEE
Confidence 99886542 122556788999999999 688999999999999999999988877654 4566888888 4679999
Q ss_pred eCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 162 GSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 162 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
|+.||.|++||+++++.+..+.+|...|.+++| ++.+|++++ +.+++||+...
T Consensus 312 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 312 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHH
T ss_pred EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCC
Confidence 999999999999999999999999999999999 788899887 88999998654
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-32 Score=204.14 Aligned_cols=203 Identities=10% Similarity=0.062 Sum_probs=155.3
Q ss_pred hhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecC---------cceeeeeee-ccC--CceEEEcC--CCCEE
Q 026679 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR---------VNACQGILR-LRG--RPTVAFDQ--QGLVF 69 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~---------~~~~~~~~~-~~~--~~~~~~~~--~~~~l 69 (235)
++.+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+. .+. ...++++| +++++
T Consensus 68 ~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 142 (343)
T 3lrv_A 68 SKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYF 142 (343)
T ss_dssp SSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEE
T ss_pred CcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEE
Confidence 33444443 467888888887 9999999999999765 344344443 232 33499999 99999
Q ss_pred EEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee-eeeccCCCCCcce
Q 026679 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR-CGFSLEPSPNTNT 148 (235)
Q Consensus 70 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~i~ 148 (235)
++++.||.|++||+++++. .......+...+.+++|+|++.+|++|+.||.|++||+++++.. ..+.. .|..+|.
T Consensus 143 ~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~ 218 (343)
T 3lrv_A 143 IWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-DEEAKIK 218 (343)
T ss_dssp EEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-CTTSCEE
T ss_pred EEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-cCCCCEE
Confidence 9999999999999987654 12222345667999999999999999999999999999998876 54543 3667899
Q ss_pred eeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecC---CCccee--EEEeecCCCEEEE--c-ccceEEeeCCCC
Q 026679 149 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG---NIGVVA--CLKWAPRRAMFVA--A-SSVLSFWIPNPS 216 (235)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~---~~~~v~--~~~~~~~~~~l~~--~-~~~i~iw~~~~~ 216 (235)
+++|+|++.+|++++ ++.|++||+++++.+..+.. |...+. +++|+|++++|++ + ++.+++|+++..
T Consensus 219 ~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 219 EVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred EEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 999999999999999 45999999999887665543 434444 5999999999999 5 477999998654
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-31 Score=206.19 Aligned_cols=200 Identities=11% Similarity=0.082 Sum_probs=163.9
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcce---eeeeeecc-----------------------------------
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA---CQGILRLR----------------------------------- 55 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~----------------------------------- 55 (235)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3588999999999966655 57899999999887 55554422
Q ss_pred ---------------------CCceEEEcCCCCEE-EEEecCCeEEEEecc--CCCCCCceeEeecCCCcceeEEEEccC
Q 026679 56 ---------------------GRPTVAFDQQGLVF-AVAMEAGAIKLFDSR--SYDKGPFDTFLVGGDTAEVCDIKFSND 111 (235)
Q Consensus 56 ---------------------~~~~~~~~~~~~~l-~~~~~dg~v~i~d~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (235)
.+.+++|+|+++.| ++++.||.|++||+. ++.. ........+...|.+++|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV--LKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC--EEEEEEEECSSCEEEEEECTT
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce--eeeeecccCCCCceEEEEcCC
Confidence 12348999999996 888899999999998 5443 223332356788999999999
Q ss_pred CCeEEEecCCCcEEEEEcCCCceee--eeccCCCCCcceeeEEeCC---CcEEEEeCCCCcEEEEEcCCCceeee-ecCC
Q 026679 112 GKSMLLTTTNNNIYVLDAYGGEKRC--GFSLEPSPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRNEVAC-WNGN 185 (235)
Q Consensus 112 ~~~l~~~~~d~~i~~~d~~~~~~~~--~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~ 185 (235)
+++|++++.++.|++|++.+++... ...+..|...|.+++|+|+ +++|++++.|+.|++||+++++.+.. +.+|
T Consensus 161 ~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 161 DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC
T ss_pred CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC
Confidence 9999999999999999998876542 1123345577999999999 99999999999999999999988877 5689
Q ss_pred CcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 186 IGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 186 ~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
...|.+++|+ ++.+|++++ +.|++||+.+.+
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999 999999998 789999998765
No 109
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-32 Score=225.95 Aligned_cols=209 Identities=17% Similarity=0.204 Sum_probs=167.8
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceee--eeee---------ccC--CceEEEcCCCCEEEEEecC
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQ--GILR---------LRG--RPTVAFDQQGLVFAVAMEA 75 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~---------~~~--~~~~~~~~~~~~l~~~~~d 75 (235)
.+++|...+.+++|+|++++|++|+.|++|++||+.++... ..+. .|. +..++|+|++++||+|+.|
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET 509 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT
T ss_pred cccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC
Confidence 46778888888889999999999999999999999877432 1111 333 3449999999999999999
Q ss_pred CeEEEEeccCCCCCC-----------------------------------------ceeEeecCCCcceeEEEEccCCCe
Q 026679 76 GAIKLFDSRSYDKGP-----------------------------------------FDTFLVGGDTAEVCDIKFSNDGKS 114 (235)
Q Consensus 76 g~v~i~d~~~~~~~~-----------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~ 114 (235)
|+|++||+.+.+... .....+.+|...|++++|+|+| +
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~ 588 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F 588 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence 999999998653100 1134566799999999999999 9
Q ss_pred EEEecCCCcEEEEEcCCCceeeee---ccC-CCCCcceeeEEe-----CCC---cEEEEeCCCCcEEEEEc---CCCcee
Q 026679 115 MLLTTTNNNIYVLDAYGGEKRCGF---SLE-PSPNTNTEATFT-----PDG---QYVVSGSGDGTLHAWNI---NTRNEV 179 (235)
Q Consensus 115 l~~~~~d~~i~~~d~~~~~~~~~~---~~~-~~~~~i~~~~~~-----~~~---~~l~~~~~dg~i~v~d~---~~~~~~ 179 (235)
|++|+.|++|++||++++..+... ... .|...|++++|+ ||| ++|++|+.|++|++||+ .+|+..
T Consensus 589 lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 589 VGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred EEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 999999999999999887765421 232 677889999999 885 89999999999999999 788888
Q ss_pred eeecCC-----CcceeEEE-ee----------------------cCCCEEEEcccceEEeeCCCCCC
Q 026679 180 ACWNGN-----IGVVACLK-WA----------------------PRRAMFVAASSVLSFWIPNPSSN 218 (235)
Q Consensus 180 ~~~~~~-----~~~v~~~~-~~----------------------~~~~~l~~~~~~i~iw~~~~~~~ 218 (235)
..+.+| .++|..++ |+ +++.+|+++...++||++.+.+.
T Consensus 669 ~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~~k~ 735 (902)
T 2oaj_A 669 VQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGKSKS 735 (902)
T ss_dssp EEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTCCCE
T ss_pred EEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEeccceEEEeCccccc
Confidence 887766 36777777 65 56777777779999999977543
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-31 Score=206.55 Aligned_cols=203 Identities=17% Similarity=0.241 Sum_probs=169.4
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceee---eeeeccCCceEEEcCCCCEEEEEecCCeE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQ---GILRLRGRPTVAFDQQGLVFAVAMEAGAI 78 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~dg~v 78 (235)
++++.+..+.+|...|.+++|++ ..+++|+.||.|++||+.++... ..+..+...+.++..+++.+++++.||.|
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i 278 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTI 278 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEE
T ss_pred CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeE
Confidence 45777888899999999999974 69999999999999999887655 55666666665555589999999999999
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcE
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQY 158 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 158 (235)
++||+++.+. ...+..|...+.++++ +++++++++.||.|++||+++++.+..+. .|...|.+++| ++++
T Consensus 279 ~vwd~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 279 KVWNTSTCEF----VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE--GHEELVRCIRF--DNKR 348 (435)
T ss_dssp EEEETTTCCE----EEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEC--CSSE
T ss_pred EEEECCcCcE----EEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEe--CCcCcEEEEEe--cCCE
Confidence 9999988664 5667788999999988 46799999999999999999998887665 45567999988 7889
Q ss_pred EEEeCCCCcEEEEEcCCCc---------eeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 159 VVSGSGDGTLHAWNINTRN---------EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 159 l~~~~~dg~i~v~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
|++|+.||.|++||+++++ .+..+.+|.+.|.+++| ++.+|++++ +.+++|++.....
T Consensus 349 l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 349 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp EEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred EEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 9999999999999998766 77888999999999999 778899887 8899999976543
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=8.7e-31 Score=203.11 Aligned_cols=205 Identities=16% Similarity=0.262 Sum_probs=171.7
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
.+++.+..+.+|...|.+++| +++++++++.||.|++||+++++.+..+..+...+.++..++..+++++.||.|++|
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~ 304 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVW 304 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEE
T ss_pred CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEE
Confidence 345667778888888988888 578888999999999999888888888887776665555588999999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccC-CCCCcceeeEEeCCCcEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE-PSPNTNTEATFTPDGQYVV 160 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~ 160 (235)
|+++++. ...+..|...+.++.+ +++++++++.||.|++||+++++....+..+ .+...|.+++|+ +++|+
T Consensus 305 d~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 376 (445)
T 2ovr_B 305 DVETGNC----IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVI 376 (445)
T ss_dssp ETTTCCE----EEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEE
T ss_pred ECCCCCE----EEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEE
Confidence 9987664 5566788888887776 4678999999999999999999888777653 266779999985 57999
Q ss_pred EeCCCCcEEEEEcCCCceeeee-----cCCCcceeEEEeecCCCEEEEcc--cc----eEEeeCCCC
Q 026679 161 SGSGDGTLHAWNINTRNEVACW-----NGNIGVVACLKWAPRRAMFVAAS--SV----LSFWIPNPS 216 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~--~~----i~iw~~~~~ 216 (235)
+|+.||.|++||+++++.+..+ ..|.+.|.+++|+|++.++++++ |. +.+||++..
T Consensus 377 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 377 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 9999999999999999988877 46788999999999999999987 65 999999754
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-31 Score=206.31 Aligned_cols=195 Identities=10% Similarity=0.054 Sum_probs=151.0
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCcce-----------------------------eeeeee-ccC--Cce
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-----------------------------CQGILR-LRG--RPT 59 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-----------------------------~~~~~~-~~~--~~~ 59 (235)
.-...|.+++|+|||+++|+++.|++|+ |.+.++ ....+. .+. +..
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 3457899999999999999999999995 433222 111111 112 234
Q ss_pred EEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCc-----ceeEEEEccCCCeEEEecCCCcEEEEEcCCCce
Q 026679 60 VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTA-----EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK 134 (235)
Q Consensus 60 ~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 134 (235)
++|+|+|..|++++.||.|++||... ....+. |.. .+.+++|+|||++|++++.||+|++||+.++..
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 99999999999999999999999543 223333 444 599999999999999999999999999998753
Q ss_pred -------eeeec--cCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCcee---eee-cCCCcceeEEEeecCCCEE
Q 026679 135 -------RCGFS--LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV---ACW-NGNIGVVACLKWAPRRAMF 201 (235)
Q Consensus 135 -------~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~---~~~-~~~~~~v~~~~~~~~~~~l 201 (235)
+..+. ..+|...|.+++|+|+| +++++.|+.+++||+.+++.. .++ .+|...|.+++|+ +..|
T Consensus 164 ~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~L 239 (588)
T 2j04_A 164 NTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKV 239 (588)
T ss_dssp TCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEE
T ss_pred ccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEE
Confidence 23332 24466889999999999 788888999999999877742 456 4788899999999 5788
Q ss_pred EEcc-cceEEeeCCCCCCC
Q 026679 202 VAAS-SVLSFWIPNPSSNS 219 (235)
Q Consensus 202 ~~~~-~~i~iw~~~~~~~~ 219 (235)
++++ +.|++|++.+....
T Consensus 240 ASa~~~tIkLWd~~~~~~~ 258 (588)
T 2j04_A 240 VLTCPGYVHKIDLKNYSIS 258 (588)
T ss_dssp EEECSSEEEEEETTTTEEE
T ss_pred EEEeCCeEEEEECCCCeEE
Confidence 8777 88999999877663
No 113
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.2e-31 Score=212.11 Aligned_cols=203 Identities=10% Similarity=0.076 Sum_probs=174.5
Q ss_pred cccccceeEEEeecCCCeeEEEeccceEEEEecCcc----eeeeeeeccCCc-e--EEEcC--CCCEEEEEecCCeEEEE
Q 026679 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVN----ACQGILRLRGRP-T--VAFDQ--QGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 11 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~-~--~~~~~--~~~~l~~~~~dg~v~i~ 81 (235)
..|.+.|.+++|+|++++|++++ ++.|++||+.++ +....+..|... + ++|+| ++++|++++.||.|++|
T Consensus 15 ~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 15 STQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 36889999999999999999998 789999999988 888888888766 4 99999 99999999999999999
Q ss_pred eccCCCC----CCceeEeecCCCcceeEEEEccCCCeEEEecCC----CcEEEEEcCCCceeeeeccCCCCCcceeeEEe
Q 026679 82 DSRSYDK----GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT 153 (235)
Q Consensus 82 d~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 153 (235)
|+.++.. .......+..|...|.+++|+|++++|++++.+ +.|++|| .++....+ ..|...|.+++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~--~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEV--SGHSQRINACHLK 169 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEEC--CSCSSCEEEEEEC
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceee--ecCCccEEEEEEC
Confidence 9975410 011244566788999999999999999999987 6888888 45555444 4566779999999
Q ss_pred CCCc-EEEEeCCCCcEEEEEcCCCceeeeecCCCc---ceeEEEeecC-CCEEEEcc--cceEEeeCCCCCC
Q 026679 154 PDGQ-YVVSGSGDGTLHAWNINTRNEVACWNGNIG---VVACLKWAPR-RAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 154 ~~~~-~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
|+++ .+++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++ +.+++|++...+.
T Consensus 170 ~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 170 QSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp SSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCE
T ss_pred CCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCE
Confidence 9998 899999999999999999999999999998 9999999999 99999887 8899999976553
No 114
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.1e-30 Score=201.01 Aligned_cols=202 Identities=19% Similarity=0.321 Sum_probs=176.7
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
.+++.+..+.+|.+.|++++|+ ++.+++|+.||+|++||+.+++....+..|...+.++..+++.+++++.||.|++|
T Consensus 147 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~w 224 (445)
T 2ovr_B 147 VTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 224 (445)
T ss_dssp TTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEE
Confidence 4677788899999999999998 57999999999999999999999999988887775555567899999999999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 161 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (235)
|+.+++. ...+..|...+.+++| +++.+++++.|+.|++||+++++....+. .|...+.++.| +++++++
T Consensus 225 d~~~~~~----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~--~~~~l~~ 294 (445)
T 2ovr_B 225 DIETGQC----LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ--GHTNRVYSLQF--DGIHVVS 294 (445)
T ss_dssp ESSSCCE----EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC--CCSSCEEEEEE--CSSEEEE
T ss_pred ECCCCcE----EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec--CCCCceEEEEE--CCCEEEE
Confidence 9988664 5566789999999998 78899999999999999999998877665 45567999988 8899999
Q ss_pred eCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 162 GSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 162 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
++.||.|++||+++++.+..+.+|...+.++.++ +.++++++ +.+++||++...
T Consensus 295 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~ 350 (445)
T 2ovr_B 295 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQ 350 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCc
Confidence 9999999999999999999999999999888774 56888887 889999997654
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=3.2e-30 Score=195.08 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=138.3
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeee--eccCC--ceEEEcCCCCEEEEEecCC-
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL--RLRGR--PTVAFDQQGLVFAVAMEAG- 76 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~--~~~~~--~~~~~~~~~~~l~~~~~dg- 76 (235)
++++.+..++ |...|.+++|+|+|++|++++.+ .+++|+..+++..... ..+.. ..++|+|++..+++++.++
T Consensus 165 ~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 165 SDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG 242 (365)
T ss_dssp TTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS
T ss_pred CCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc
Confidence 3455555664 77889999999999999999865 5667776666654433 23332 3489999999999999887
Q ss_pred ---eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEe
Q 026679 77 ---AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT 153 (235)
Q Consensus 77 ---~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 153 (235)
.+++|++............+..|...|++++|+|+|++|++|+.|+.|++||+++++.+..+ ...|...|++++|+
T Consensus 243 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~-~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 243 KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF-KQAHSFAITEVTIS 321 (365)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE-TTSSSSCEEEEEEC
T ss_pred ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe-cCcccCCEEEEEEC
Confidence 68889987765433344567788999999999999999999999999999999999887654 34577889999999
Q ss_pred CCCcEEEEeCCCCcEEEEEcCC
Q 026679 154 PDGQYVVSGSGDGTLHAWNINT 175 (235)
Q Consensus 154 ~~~~~l~~~~~dg~i~v~d~~~ 175 (235)
|||++|++|+.|++|+|||+..
T Consensus 322 pdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 322 PDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEEETTSEEEEEECCT
T ss_pred CCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999999964
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=3.2e-28 Score=185.58 Aligned_cols=206 Identities=15% Similarity=0.164 Sum_probs=167.6
Q ss_pred chhhhhhhhcccccceeEEEeecCCCee-EEEeccceEEEEecCcceeeeeeeccCCc-eEEEcCCCCEEEEEe-cCCeE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSF-MSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVFAVAM-EAGAI 78 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~-~dg~v 78 (235)
++++++..+.+|. .+.+++|+|+++++ ++++.|+.|++||+.+++....+..+... .++|+|+++.+++++ .++.|
T Consensus 20 ~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v 98 (391)
T 1l0q_A 20 TSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTL 98 (391)
T ss_dssp TTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEE
Confidence 4567777777775 48999999999876 67779999999999999988888766633 499999999876554 67999
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeE-EEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCc
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
++||+.+++. ..... +...+.+++|+|+++.+ ++++.++.|++||+.+++....+..+ ..+..++|+|+++
T Consensus 99 ~v~d~~~~~~----~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~dg~ 170 (391)
T 1l0q_A 99 SVIDTTSNTV----AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG---RSPKGIAVTPDGT 170 (391)
T ss_dssp EEEETTTTEE----EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC---SSEEEEEECTTSS
T ss_pred EEEECCCCeE----EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC---CCcceEEECCCCC
Confidence 9999987653 22222 34578999999999977 67788999999999999887766543 3468999999998
Q ss_pred EE-EEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-----cceEEeeCCCCC
Q 026679 158 YV-VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-----SVLSFWIPNPSS 217 (235)
Q Consensus 158 ~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~i~iw~~~~~~ 217 (235)
+| ++++.++.|++||+++++.+..+. +...+.+++|+|+++++++++ +.+++||+++.+
T Consensus 171 ~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 171 KVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred EEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 87 677889999999999998887776 456889999999999888774 679999997653
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=4.2e-29 Score=186.90 Aligned_cols=178 Identities=15% Similarity=0.229 Sum_probs=144.5
Q ss_pred hhhhhhcccccceeEEEeec--CCCeeEEEeccceEEEEecCcc---------eeeeeeeccCCce--EEEcCC--CCEE
Q 026679 5 RILRYFKGHKERVISLCMSP--VNDSFMSGSLDHSVRIWDLRVN---------ACQGILRLRGRPT--VAFDQQ--GLVF 69 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd~~~~---------~~~~~~~~~~~~~--~~~~~~--~~~l 69 (235)
+++..+.+|...|++++|+| ++++|++++.||.|++||++++ +....+..+...+ ++|+|+ +.++
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 35667789999999999999 5899999999999999999876 4466666665544 999999 9999
Q ss_pred EEEecCCeEEEEeccCCCCCCc--------------------------------------------------------ee
Q 026679 70 AVAMEAGAIKLFDSRSYDKGPF--------------------------------------------------------DT 93 (235)
Q Consensus 70 ~~~~~dg~v~i~d~~~~~~~~~--------------------------------------------------------~~ 93 (235)
++++.||.|++||+++.+.... ..
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 207 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee
Confidence 9999999999999876542111 13
Q ss_pred EeecCCCcceeEEEEccCC----CeEEEecCCCcEEEEEcCCCce-----------------------------------
Q 026679 94 FLVGGDTAEVCDIKFSNDG----KSMLLTTTNNNIYVLDAYGGEK----------------------------------- 134 (235)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~~d~~~~~~----------------------------------- 134 (235)
..+.+|...|.+++|+|++ ++|++++.||.|++||++.+..
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 3445688899999999998 7899999999999999986511
Q ss_pred ---------eeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeee
Q 026679 135 ---------RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182 (235)
Q Consensus 135 ---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 182 (235)
........|...|++++|+|++++|++++.||.|++||+.+++....+
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 122234456678999999999999999999999999999987655443
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=9.3e-30 Score=194.37 Aligned_cols=202 Identities=10% Similarity=0.031 Sum_probs=134.6
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeee-----eeeccCCce--EEEcC--------CCCEEEEEecCCeE
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG-----ILRLRGRPT--VAFDQ--------QGLVFAVAMEAGAI 78 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~-----~~~~~~~~~--~~~~~--------~~~~l~~~~~dg~v 78 (235)
...+....+.+++.+|++++.|++|++||.++++... .+.+|...+ ++|+| ++++|++++.|++|
T Consensus 89 ~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv 168 (393)
T 4gq1_A 89 DGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTL 168 (393)
T ss_dssp --------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEE
T ss_pred CCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeE
Confidence 3334444455566789999999999999998876433 345566544 89987 78999999999999
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCC-CeEEEecCCCcEEEEEcCCCceeeeec------------------
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG-KSMLLTTTNNNIYVLDAYGGEKRCGFS------------------ 139 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~------------------ 139 (235)
++||+++... ......|...+.+++|+|++ .+|++++.|+.|++||+++++......
T Consensus 169 ~~Wd~~~~~~----~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~ 244 (393)
T 4gq1_A 169 IIWRLTDEGP----ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL 244 (393)
T ss_dssp EEEEEETTEE----EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG
T ss_pred EEEECCCCce----eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc
Confidence 9999987553 55566788999999999987 479999999999999998876433211
Q ss_pred -----cCCCCCcceeeEEe-CCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEe------------------e
Q 026679 140 -----LEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKW------------------A 195 (235)
Q Consensus 140 -----~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~------------------~ 195 (235)
...+...+.++.|+ |+++.|++++.|+.+++||+..++....+..|...+..+.+ +
T Consensus 245 ~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 245 VNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp C------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred eeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEc
Confidence 12345668888887 79999999999999999999887766666555444433333 3
Q ss_pred c--CCCEEEEcc--cceEEeeCCCCCCC
Q 026679 196 P--RRAMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 196 ~--~~~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
| ++.++++++ +.|++||+......
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred cCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 2 334566665 78999999876544
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=6e-29 Score=187.47 Aligned_cols=208 Identities=11% Similarity=0.106 Sum_probs=157.6
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcc-eeeeeeeccCCceEEEcCCCCEEEE--EecCCeE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVN-ACQGILRLRGRPTVAFDQQGLVFAV--AMEAGAI 78 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~--~~~dg~v 78 (235)
.+++.+..+. |..+|.+++|+++. ++.+ .|+.|++||+.++ +.+..+.. ....+++++ ..+++ |+.+|.|
T Consensus 89 ~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~--~~la~~sg~~~g~v 161 (355)
T 3vu4_A 89 VKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFSN--GLLVYSNEFNLGQI 161 (355)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEET--TEEEEEESSCTTCE
T ss_pred CCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEEc--cEEEEeCCCcCcEE
Confidence 3566666665 56789999998753 4443 4789999999988 66666655 333477777 56665 5789999
Q ss_pred EEEeccCCCCC------C-----ce-eEeecCCCcceeEEEEccCCCeEEEecCCCc-EEEEEcCCCceeeeeccCCCCC
Q 026679 79 KLFDSRSYDKG------P-----FD-TFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN-IYVLDAYGGEKRCGFSLEPSPN 145 (235)
Q Consensus 79 ~i~d~~~~~~~------~-----~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~~d~~~~~~~~~~~~~~~~~ 145 (235)
++||+.+.... . .. ...+.+|...|.+++|+|++++|++++.|++ |++||+++++.+..+....|..
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence 99999875410 0 01 3556789999999999999999999999998 9999999999888776333667
Q ss_pred cceeeEEeCCCcEEEEeCCCCcEEEEEcCCCcee--eeec---------------------CCCcceeEEEeecCCCEEE
Q 026679 146 TNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV--ACWN---------------------GNIGVVACLKWAPRRAMFV 202 (235)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~---------------------~~~~~v~~~~~~~~~~~l~ 202 (235)
.|.+++|+|++++|++++.|+.|++||++.+... ..+. ....+...++|+|++.+|+
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~ 321 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVV 321 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEE
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEE
Confidence 8999999999999999999999999999765321 1110 1122347799999999999
Q ss_pred Ecc--cceEEeeCCCC
Q 026679 203 AAS--SVLSFWIPNPS 216 (235)
Q Consensus 203 ~~~--~~i~iw~~~~~ 216 (235)
+++ |.+++|++...
T Consensus 322 ~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 322 VWPHTRMIETFKVVFD 337 (355)
T ss_dssp EETTTTEEEEEEEEEE
T ss_pred EEeCCCeEEEEEEEcC
Confidence 987 78999988643
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=6.1e-29 Score=181.94 Aligned_cols=167 Identities=10% Similarity=0.161 Sum_probs=125.0
Q ss_pred hhhhhhhhcccccceeEEEeec---CCCeeEEEeccceEEEEecCcceeeeeeeccCC-----ceEEEcCCCCEE-----
Q 026679 3 DNRILRYFKGHKERVISLCMSP---VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR-----PTVAFDQQGLVF----- 69 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~---~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~l----- 69 (235)
+|+.+..+.+|...++.++|+| ++.+|++++.|++|+|||++++++++++..+.. ..++|+|++.++
T Consensus 167 dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 167 DGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp TSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred CCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Confidence 4566666777888888888888 668899999999999999999999999976542 236899999876
Q ss_pred -------EEEecCCeEEEEeccCCCCCCceeEe-ecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccC
Q 026679 70 -------AVAMEAGAIKLFDSRSYDKGPFDTFL-VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE 141 (235)
Q Consensus 70 -------~~~~~dg~v~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 141 (235)
++|+.|+++++||..+++........ ..+|...+.+..+ ++..+++++.|++|++||+.+++.+..+..
T Consensus 247 ~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~g- 323 (356)
T 2w18_A 247 PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPP- 323 (356)
T ss_dssp -----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECC-
T ss_pred CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecC-
Confidence 56778999999999876531110101 1345444443333 377899999999999999999998887654
Q ss_pred CCCCc-ceeeEEeCCCcEEEEeCCCCcEEEEEc
Q 026679 142 PSPNT-NTEATFTPDGQYVVSGSGDGTLHAWNI 173 (235)
Q Consensus 142 ~~~~~-i~~~~~~~~~~~l~~~~~dg~i~v~d~ 173 (235)
|... +..++|+|+|++|++|+.|++|+|||+
T Consensus 324 -H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 324 -VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred -CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 3333 445899999999999999999999996
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.1e-27 Score=182.57 Aligned_cols=206 Identities=13% Similarity=0.109 Sum_probs=165.9
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeeccCCc-eEEEcCCCCEE-EEEecCCeE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVF-AVAMEAGAI 78 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l-~~~~~dg~v 78 (235)
.+++++..+..|. .+.+++|+|++++|+ +++.|+.|++||+.+++....+..+... .++|+|+++.+ ++++.++.|
T Consensus 62 ~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 62 ATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp TTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 4566666776665 899999999999775 5556799999999999988887766543 49999999977 677789999
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeE-EEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCc
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
++||+.+++. ...+.. ...+.+++|+|+++.+ ++++.++.|++||+++++....+.. ...+.+++|+|+++
T Consensus 141 ~~~d~~~~~~----~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~ 212 (391)
T 1l0q_A 141 SVINTVTKAV----INTVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV---EAAPSGIAVNPEGT 212 (391)
T ss_dssp EEEETTTTEE----EEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---SSEEEEEEECTTSS
T ss_pred EEEECCCCcE----EEEEec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec---CCCccceEECCCCC
Confidence 9999987653 333333 3457899999999887 5677899999999999887766553 24588999999999
Q ss_pred EEEEeC---CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEE-Ecc--cceEEeeCCCCC
Q 026679 158 YVVSGS---GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFV-AAS--SVLSFWIPNPSS 217 (235)
Q Consensus 158 ~l~~~~---~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~--~~i~iw~~~~~~ 217 (235)
+|++++ .++.|++||+++++.+..+..+. .+.+++|+|++++++ +++ +.+++||+++.+
T Consensus 213 ~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 213 KAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 998887 68999999999999888887664 578999999999884 444 779999998654
No 122
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.2e-27 Score=183.89 Aligned_cols=209 Identities=15% Similarity=0.196 Sum_probs=161.8
Q ss_pred hhhhhhhcccccceeEEEeecCCCeeEEEeccc---eEEEEecCcceeeeeeeccC-CceEEEcCCCCEEE-EEecCC--
Q 026679 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDH---SVRIWDLRVNACQGILRLRG-RPTVAFDQQGLVFA-VAMEAG-- 76 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~~~dg-- 76 (235)
+...+.+.+|...|.+++|+|+|+.|++++.|+ .|++||+.+++......... ...++|+|+|+.|+ +++.++
T Consensus 168 g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~ 247 (415)
T 2hqs_A 168 GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSL 247 (415)
T ss_dssp SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCc
Confidence 344567778999999999999999999999885 99999999887764333222 23499999999887 555555
Q ss_pred eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC-CC--cEEEEEcCCCceeeeeccCCCCCcceeeEEe
Q 026679 77 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-NN--NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT 153 (235)
Q Consensus 77 ~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 153 (235)
.|++||+.+++ ...+..+...+.+++|+|||+.|++++. ++ .|++||+.+++... +. .+...+..++|+
T Consensus 248 ~i~~~d~~~~~-----~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~--~~~~~~~~~~~s 319 (415)
T 2hqs_A 248 NLYVMDLASGQ-----IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR-IT--WEGSQNQDADVS 319 (415)
T ss_dssp EEEEEETTTCC-----EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-CC--CSSSEEEEEEEC
T ss_pred eEEEEECCCCC-----EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-Ee--cCCCcccCeEEC
Confidence 48999998754 3455567788999999999999988876 44 68888988876432 22 234568899999
Q ss_pred CCCcEEEEeCCC---CcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--c---ceEEeeCCCCCCCCCC
Q 026679 154 PDGQYVVSGSGD---GTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--S---VLSFWIPNPSSNSTDE 222 (235)
Q Consensus 154 ~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~---~i~iw~~~~~~~~~~~ 222 (235)
|+|++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|+|++|++++ + .+++|++++.....+.
T Consensus 320 pdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 320 SDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp TTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred CCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 999999888764 58999999888764 455454 899999999999998886 3 6999998876655544
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1e-27 Score=185.07 Aligned_cols=205 Identities=13% Similarity=0.146 Sum_probs=166.9
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeeccCCc-eEEEcCCCCEEEEEe------
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVFAVAM------ 73 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~------ 73 (235)
++++.+..+..|...+.+++|+|+++.++ +++.|+.|++||+++++....+..+... .++|+|+++.+++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQ 278 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTT
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcc
Confidence 34566777888999999999999998875 5558999999999999888777665433 399999999999888
Q ss_pred --cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeE-EEecCCCcEEEEEcCCCceeeeeccCCCCCcceee
Q 026679 74 --EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEA 150 (235)
Q Consensus 74 --~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~ 150 (235)
.||.|++||+.+++. .....+...+.+++|+|+++.+ ++++.++.|++||+.+++....+.. ...+.++
T Consensus 279 ~~~dg~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~---~~~~~~~ 350 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKL-----IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV---FDKPNTI 350 (433)
T ss_dssp CSCCEEEEEEETTTTEE-----EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEE
T ss_pred ccCCCeEEEEECCCCcE-----EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC---CCCCCeE
Confidence 488999999987542 2223445678899999999755 5568899999999999887766652 3558899
Q ss_pred EEeCCCcEEEEeCC---------------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEee
Q 026679 151 TFTPDGQYVVSGSG---------------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWI 212 (235)
Q Consensus 151 ~~~~~~~~l~~~~~---------------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~ 212 (235)
+|+|++++|++++. ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++ +.+++|+
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 99999998888766 57999999999998888875 45789999999999988764 7799999
Q ss_pred CCC
Q 026679 213 PNP 215 (235)
Q Consensus 213 ~~~ 215 (235)
++.
T Consensus 430 ~~~ 432 (433)
T 3bws_A 430 RDG 432 (433)
T ss_dssp ETT
T ss_pred ecC
Confidence 863
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.6e-27 Score=184.00 Aligned_cols=200 Identities=11% Similarity=0.126 Sum_probs=165.1
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEEe-cCCeEEEEeccC
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVAM-EAGAIKLFDSRS 85 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~-~dg~v~i~d~~~ 85 (235)
.+.+|.+.|.+++|+|++.++++++.|+.|++||+++++....+..+... .++|+|+++.+++++ .++.|++||+++
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 56789999999999999999999999999999999999888888766543 399999999886554 799999999987
Q ss_pred CCCCCceeEeecCCCcceeEEEEccCCCeEEEec--------CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCc
Q 026679 86 YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT--------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
++. .... .....+.+++|+|+++.+++++ .|+.|++||+++++....... ...+.+++|+|+++
T Consensus 244 ~~~----~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 244 KLE----IRKT-DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP---PGNKRHIVSGNTEN 315 (433)
T ss_dssp TEE----EEEC-CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE---EECEEEEEECSSTT
T ss_pred CcE----EEEe-cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC---CCCcceEEECCCCC
Confidence 543 2222 3345689999999999999888 488999999999887665532 23578899999997
Q ss_pred EE-EEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEccc-----------------ceEEeeCCCCC
Q 026679 158 YV-VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASS-----------------VLSFWIPNPSS 217 (235)
Q Consensus 158 ~l-~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------~i~iw~~~~~~ 217 (235)
.+ ++++.++.|++||+.+++.+..+. +...+.+++|+|+++++++++. .+++||+.+.+
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 55 666899999999999998887776 6678999999999998888762 79999997654
No 125
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1.1e-26 Score=172.09 Aligned_cols=199 Identities=18% Similarity=0.332 Sum_probs=156.2
Q ss_pred eeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC----CceEEEcCCCCEEEEEecCCeEEEEeccCCCCC---
Q 026679 17 VISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG----RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG--- 89 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~--- 89 (235)
.++|+||+++ +||+| .|++|+|||+.+++.+..+..+. +.+++|+|++++|++|+.||.|++||+++++..
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5779999875 66665 59999999999999888876543 234999999999999999999999998864320
Q ss_pred ----------------------------------CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee
Q 026679 90 ----------------------------------PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR 135 (235)
Q Consensus 90 ----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 135 (235)
......+.+|...+..+.+.++++++++++.|+.|++||+++++..
T Consensus 106 ~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 106 TSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred cCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 1112234467788899999999999999999999999999876543
Q ss_pred e--eeccCCCCCcceeeEEeCCCcEE---EEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc----c
Q 026679 136 C--GFSLEPSPNTNTEATFTPDGQYV---VSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS----S 206 (235)
Q Consensus 136 ~--~~~~~~~~~~i~~~~~~~~~~~l---~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~ 206 (235)
. ......+...+..+.++|++..+ ++++.++.|++||.+......... +...+..+.|+|++..+++++ +
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~ 264 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQN 264 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCC
Confidence 2 22334455779999999976533 467889999999998887766654 667899999999999887653 6
Q ss_pred ceEEeeCCCCCC
Q 026679 207 VLSFWIPNPSSN 218 (235)
Q Consensus 207 ~i~iw~~~~~~~ 218 (235)
.|++||+++.+.
T Consensus 265 ~i~iwd~~~~~~ 276 (318)
T 4ggc_A 265 QLVIWKYPTMAK 276 (318)
T ss_dssp CEEEEETTTCCE
T ss_pred EEEEEECCCCcE
Confidence 799999986654
No 126
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.1e-26 Score=178.89 Aligned_cols=193 Identities=17% Similarity=0.314 Sum_probs=156.3
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC----CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCc
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG----RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
.++.|+|+++ +.|++| .|++|+|||..+++....+..+. +.+++|+|+|++|++|+.||.|++||+++++.
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~--- 181 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR--- 181 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE---
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE---
Confidence 3567999975 567666 59999999999999888776543 34599999999999999999999999988664
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 171 (235)
.....+|...+.+++++ +..|++++.|+.+++||.+...... ..+..|...+..+.++|+++++++++.|+.+++|
T Consensus 182 -~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~-~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~ 257 (420)
T 4gga_A 182 -LRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW 257 (420)
T ss_dssp -EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -EEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceee-EEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence 66778899999887764 6789999999999999988754332 2334566779999999999999999999999999
Q ss_pred EcCCCce----eeeecCCCcceeEEEeecCCC-EEEEcc----cceEEeeCCCCC
Q 026679 172 NINTRNE----VACWNGNIGVVACLKWAPRRA-MFVAAS----SVLSFWIPNPSS 217 (235)
Q Consensus 172 d~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~----~~i~iw~~~~~~ 217 (235)
+..+++. +.....|...|.+++|+|++. ++++++ +.|++||+.+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 9987653 455677889999999999665 444432 679999997654
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.6e-25 Score=172.01 Aligned_cols=209 Identities=17% Similarity=0.110 Sum_probs=157.1
Q ss_pred hhhhh--hhhcccccceeEEEeecC--------------CCeeEEEecc------ceEEEEecCcceeeeeeeccCCc--
Q 026679 3 DNRIL--RYFKGHKERVISLCMSPV--------------NDSFMSGSLD------HSVRIWDLRVNACQGILRLRGRP-- 58 (235)
Q Consensus 3 ~~~~~--~~~~~h~~~v~~~~~~~~--------------~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~-- 58 (235)
+++.+ ..+.+|...+..+++++. +..++.++.+ +.|++||++. .....+..+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~ 182 (415)
T 2hqs_A 104 PGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLM 182 (415)
T ss_dssp TTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEE
T ss_pred CCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcce
Confidence 45544 447788888887777651 5566666654 7999999974 444555555443
Q ss_pred eEEEcCCCCEEEEEecCC---eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEE-EecCCCc--EEEEEcCCC
Q 026679 59 TVAFDQQGLVFAVAMEAG---AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML-LTTTNNN--IYVLDAYGG 132 (235)
Q Consensus 59 ~~~~~~~~~~l~~~~~dg---~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~~~ 132 (235)
.++|+|+|+.|++++.++ .|++||+.+++. ..+..+...+.+++|+|||+.|+ +++.++. |++||+.++
T Consensus 183 ~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-----~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 183 SPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-----RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-----EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 499999999999999875 999999987653 34556777899999999999888 5555554 999999887
Q ss_pred ceeeeeccCCCCCcceeeEEeCCCcEEEEeCC-CC--cEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc----
Q 026679 133 EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-DG--TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---- 205 (235)
Q Consensus 133 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---- 205 (235)
+.. .+..+...+.+++|+|+|++|++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|++++
T Consensus 258 ~~~---~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 258 QIR---QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp CEE---ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred CEE---eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCC
Confidence 753 23345567899999999999988776 44 688889887764 34555677899999999999998886
Q ss_pred -cceEEeeCCCCCCCCC
Q 026679 206 -SVLSFWIPNPSSNSTD 221 (235)
Q Consensus 206 -~~i~iw~~~~~~~~~~ 221 (235)
..+++|++++.....+
T Consensus 334 ~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQVL 350 (415)
T ss_dssp CEEEEEEETTTCCEEEC
T ss_pred ceEEEEEECCCCCEEEe
Confidence 2699999987665443
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=5.7e-26 Score=175.23 Aligned_cols=200 Identities=18% Similarity=0.222 Sum_probs=150.9
Q ss_pred cccceeEEEeecCCCeeEEEeccceEEEEecCccee----------e------eeeecc-CCceEEEcCCCCEEE----E
Q 026679 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC----------Q------GILRLR-GRPTVAFDQQGLVFA----V 71 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~----------~------~~~~~~-~~~~~~~~~~~~~l~----~ 71 (235)
+...++.+++++++.++++++.|+ +++|+...... . ..+... ....++|+|++++|+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 344688999999999999999888 88987532110 0 111111 134499999999999 6
Q ss_pred EecCCeEEEEeccCC-----CC-CCc-eeEeecCCCcceeEEEEccC-CCeEEEecCCCcEEEEEcCCCceeeeeccCCC
Q 026679 72 AMEAGAIKLFDSRSY-----DK-GPF-DTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPS 143 (235)
Q Consensus 72 ~~~dg~v~i~d~~~~-----~~-~~~-~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 143 (235)
++.|+.|++||+.+. +. .+. ......+|...|.+++|+|+ +.+|++++.||.|++||++++...... ..|
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~--~~~ 191 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT--LPS 191 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE--ECG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec--cCC
Confidence 788999999998764 11 111 12345568899999999997 788999999999999999988654333 234
Q ss_pred CCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCC-------CcceeEEEeecCCCEEEEcc-c--------c
Q 026679 144 PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN-------IGVVACLKWAPRRAMFVAAS-S--------V 207 (235)
Q Consensus 144 ~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~-~--------~ 207 (235)
...+.+++|+|+|++|++|+.||.|++||.+ ++....+..| ...|.+++|++++.++++.+ + .
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~ 270 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPD 270 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCc
Confidence 5679999999999999999999999999998 5555544433 34899999999998886654 2 2
Q ss_pred eEEeeCCCC
Q 026679 208 LSFWIPNPS 216 (235)
Q Consensus 208 i~iw~~~~~ 216 (235)
+++|++...
T Consensus 271 v~i~~l~~~ 279 (434)
T 2oit_A 271 VVMALLPKK 279 (434)
T ss_dssp EEEEECCCT
T ss_pred eEEEEeccC
Confidence 899999754
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.1e-24 Score=159.41 Aligned_cols=202 Identities=14% Similarity=0.113 Sum_probs=152.3
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCc-ceeeeeeeccC---CceEEEcCCCCEEEEEe--cCCeEEEEe
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRV-NACQGILRLRG---RPTVAFDQQGLVFAVAM--EAGAIKLFD 82 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~---~~~~~~~~~~~~l~~~~--~dg~v~i~d 82 (235)
.+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+. ...++|+|+++.+++++ .++...+|.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 4566889999999999999999886 78999999998 77766665543 23499999999999998 445666666
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEE-EecCCCcEEEEEcC--CCceeeeeccCCCCCcceeeEEeCCCcEE
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML-LTTTNNNIYVLDAY--GGEKRCGFSLEPSPNTNTEATFTPDGQYV 159 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 159 (235)
+...... ...+. ....+..++|+|+++.|+ ++..++.+.+|++. +++.. ....+...+.+++|+|++++|
T Consensus 115 ~~~~~~~---~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 115 LPSTGGT---PRLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET---RLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp EETTCCC---CEECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE---ECCCSSSCEEEEEECTTSSEE
T ss_pred EECCCCc---eEEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce---EcccCCCccccceECCCCCEE
Confidence 5432221 12222 223488899999999887 67788988898863 33332 233444668999999999988
Q ss_pred EEeC-CCCcEEEEEcC-CCceeeeecCCCcceeEEEeecCCCEEEEccc-------------ceEEeeCCCCCC
Q 026679 160 VSGS-GDGTLHAWNIN-TRNEVACWNGNIGVVACLKWAPRRAMFVAASS-------------VLSFWIPNPSSN 218 (235)
Q Consensus 160 ~~~~-~dg~i~v~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------~i~iw~~~~~~~ 218 (235)
++++ .++.+++|++. .+..+..+..|...+..++|+|++++|++++. .+.+|++++.+.
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 7665 58899999986 56667777778888999999999999988762 399999987654
No 130
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=5.1e-25 Score=166.10 Aligned_cols=133 Identities=14% Similarity=0.159 Sum_probs=109.4
Q ss_pred EecCcceeeeeeeccCCce--EEEcCC---CCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeE
Q 026679 41 WDLRVNACQGILRLRGRPT--VAFDQQ---GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSM 115 (235)
Q Consensus 41 wd~~~~~~~~~~~~~~~~~--~~~~~~---~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 115 (235)
|+....+.+..+..|...+ ++|+|+ +++|++++.||.|++||+.+... .....+..|...|.+++|+|++++|
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ--TIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC--EEEEEEEECSSCEEEEEECTTSSEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc--eeEEEeccccCCEEEEEECcCCCEE
Confidence 3445556666777776554 999998 69999999999999999987332 1225566799999999999999999
Q ss_pred EEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEE--eCCCcEEEEeCCCCcEEEEEcCCCce
Q 026679 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATF--TPDGQYVVSGSGDGTLHAWNINTRNE 178 (235)
Q Consensus 116 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~v~d~~~~~~ 178 (235)
++++.|+.|++||+.+++..... .|...|.+++| +|++++|++++.||.|++||+++++.
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAIQIA---QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred EEEcCCCcEEEEEcCCCCceeec---cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 99999999999999998876533 35577999999 89999999999999999999876643
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=6.7e-24 Score=167.87 Aligned_cols=216 Identities=12% Similarity=0.156 Sum_probs=162.3
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEec--CcceeeeeeeccCCce-EEEcC----CCCEEEEEec
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDL--RVNACQGILRLRGRPT-VAFDQ----QGLVFAVAME 74 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~--~~~~~~~~~~~~~~~~-~~~~~----~~~~l~~~~~ 74 (235)
.+++++..+..+.. +.+++|+|+|++|++++.|++|++||+ .+++.+..+.....+. ++|+| +|+++++++.
T Consensus 167 ~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 167 DSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp TTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred CCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 45667777773333 889999999999999999999999999 7888888887554433 99999 9999998884
Q ss_pred -CCeEEEEeccCCCCCCce-------------------eEe--------------------------------ecCCCcc
Q 026679 75 -AGAIKLFDSRSYDKGPFD-------------------TFL--------------------------------VGGDTAE 102 (235)
Q Consensus 75 -dg~v~i~d~~~~~~~~~~-------------------~~~--------------------------------~~~~~~~ 102 (235)
+++|.+||..+.+..... ... ...+...
T Consensus 246 ~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~ 325 (543)
T 1nir_A 246 WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPF 325 (543)
T ss_dssp ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSS
T ss_pred cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcC
Confidence 899999997664321000 000 0011123
Q ss_pred eeEEEEccCCCeEEEec-CCCcEEEEEcCCCceeeeeccCC--CCCcceeeEEeCC-CcEEEEeC-CCCcEEEEEcCC--
Q 026679 103 VCDIKFSNDGKSMLLTT-TNNNIYVLDAYGGEKRCGFSLEP--SPNTNTEATFTPD-GQYVVSGS-GDGTLHAWNINT-- 175 (235)
Q Consensus 103 v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~-~~~l~~~~-~dg~i~v~d~~~-- 175 (235)
+..+.|+|+|+++++++ .+++|.+||..+++....+.... |.+....+ ++|+ +..++++. .|++|.+||+.+
T Consensus 326 ~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~ 404 (543)
T 1nir_A 326 LHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKN 404 (543)
T ss_dssp CCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred ccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCC
Confidence 44678999999876554 58899999999999887766432 33222222 4677 66667765 689999999988
Q ss_pred -----CceeeeecCCCcceeEEEeecCCCEEEEcc---------cceEEeeCCCCCCC
Q 026679 176 -----RNEVACWNGNIGVVACLKWAPRRAMFVAAS---------SVLSFWIPNPSSNS 219 (235)
Q Consensus 176 -----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~~i~iw~~~~~~~~ 219 (235)
++.+.++..|...+..++++|++++|.+++ +.|.+||+++.+..
T Consensus 405 ~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 405 HPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp CTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 888999999988889999999999999974 47999999876644
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=8e-24 Score=157.80 Aligned_cols=213 Identities=9% Similarity=0.055 Sum_probs=152.2
Q ss_pred hhhh-hhhhcccccceeEEEeecCCCeeEEEeccc---eEEEEecCcceeeeeeeccCCc-eEEEcCCCCEEEEE-ecCC
Q 026679 3 DNRI-LRYFKGHKERVISLCMSPVNDSFMSGSLDH---SVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVFAVA-MEAG 76 (235)
Q Consensus 3 ~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-~~dg 76 (235)
+++. ...+..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+...... .++|+|+++.++++ ..++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 71 LEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp SSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTT
T ss_pred CCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCC
Confidence 3444 555666666666699999999998655553 8999999999888877765543 49999999865555 5557
Q ss_pred e-EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEe-cCCCcEEEEEcCCCce---eeeeccCCCCCcceeeE
Q 026679 77 A-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYGGEK---RCGFSLEPSPNTNTEAT 151 (235)
Q Consensus 77 ~-v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~---~~~~~~~~~~~~i~~~~ 151 (235)
. +.+|++......................++|+|+|++++++ ..++.|.+||+.+++. +..+... ..+..++
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~---~~~~~~~ 227 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN---NLPGTIV 227 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS---SCCCCEE
T ss_pred ceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC---CCCceEE
Confidence 8 99999985432110101222334567899999999966555 4688999999998887 5555433 4467899
Q ss_pred EeCCCcEEEEeC-CCCcEEEEEcCCCce--eeeecCC----Ccc---eeEEEeecCCCEEEEcc---cceEEeeCCCCCC
Q 026679 152 FTPDGQYVVSGS-GDGTLHAWNINTRNE--VACWNGN----IGV---VACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 152 ~~~~~~~l~~~~-~dg~i~v~d~~~~~~--~~~~~~~----~~~---v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~ 218 (235)
|+|+|++|++++ .++.|.+||+.+++. +..+..+ ... ...++|+|++++|++++ +.+.+|++.....
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 999999776554 578899999998876 3333221 222 24589999999886654 6799999987554
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=7.8e-24 Score=163.35 Aligned_cols=197 Identities=15% Similarity=0.160 Sum_probs=141.4
Q ss_pred cccceeEEEeecCCCeeE----EEeccceEEEEecCcc--------ee---eeeeeccCC--ceEEEcCC-CCEEEEEec
Q 026679 13 HKERVISLCMSPVNDSFM----SGSLDHSVRIWDLRVN--------AC---QGILRLRGR--PTVAFDQQ-GLVFAVAME 74 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~----s~~~d~~i~vwd~~~~--------~~---~~~~~~~~~--~~~~~~~~-~~~l~~~~~ 74 (235)
|...|.+++|+|++++|+ +++.|+.|++||+.++ +. ...+..|.. ..++|+|+ +.+|++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 456799999999999999 8899999999998765 22 233343443 34999997 899999999
Q ss_pred CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCC-----CCCccee
Q 026679 75 AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP-----SPNTNTE 149 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~~~i~~ 149 (235)
||.|++||+++... ......|...|.+++|+|+|++|++++.||.|++||++ ++....+..+. +...+.+
T Consensus 171 Dg~v~iwD~~~~~~----~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 171 DGSIAVLQVTETVK----VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp TSCEEEEEESSSEE----EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEE
T ss_pred CCeEEEEEcCCCcc----eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEE
Confidence 99999999987632 34455678899999999999999999999999999998 55444443322 2237899
Q ss_pred eEEeCCCcEEEEe-CCCC------cEEEEEcCCCce--e---eeec-------CCCcceeEEEeecCCCEEEEcc---cc
Q 026679 150 ATFTPDGQYVVSG-SGDG------TLHAWNINTRNE--V---ACWN-------GNIGVVACLKWAPRRAMFVAAS---SV 207 (235)
Q Consensus 150 ~~~~~~~~~l~~~-~~dg------~i~v~d~~~~~~--~---~~~~-------~~~~~v~~~~~~~~~~~l~~~~---~~ 207 (235)
++|++++.++++. ..+| .+++|+++..+. . ..+. +...+-..+.+.++.+++++++ ++
T Consensus 246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~d 325 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTE 325 (434)
T ss_dssp EEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSB
T ss_pred EEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCc
Confidence 9999998887543 3333 389999976421 1 1111 1122233344457878877775 55
Q ss_pred eEEeeCC
Q 026679 208 LSFWIPN 214 (235)
Q Consensus 208 i~iw~~~ 214 (235)
+.+....
T Consensus 326 v~vl~~~ 332 (434)
T 2oit_A 326 VSILARQ 332 (434)
T ss_dssp CEEEEEC
T ss_pred eeEEEec
Confidence 6666543
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=3e-23 Score=154.69 Aligned_cols=210 Identities=8% Similarity=0.024 Sum_probs=152.9
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEec-cceEEEEecCccee-eeeeeccCC-ce-EEEcCCCCEEEEEecCC-
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSL-DHSVRIWDLRVNAC-QGILRLRGR-PT-VAFDQQGLVFAVAMEAG- 76 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~vwd~~~~~~-~~~~~~~~~-~~-~~~~~~~~~l~~~~~dg- 76 (235)
++++.+..+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+.. .. ++|+|++++++++..++
T Consensus 28 ~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 106 (331)
T 3u4y_A 28 DTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNH 106 (331)
T ss_dssp TTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSS
T ss_pred cccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCC
Confidence 4566666666666677 9999999987666655 88999999998886 655555443 34 89999999999555553
Q ss_pred --eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEec-CCCc-EEEEEcCCCceeeee--ccCCCCCcceee
Q 026679 77 --AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNN-IYVLDAYGGEKRCGF--SLEPSPNTNTEA 150 (235)
Q Consensus 77 --~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~-i~~~d~~~~~~~~~~--~~~~~~~~i~~~ 150 (235)
.|.+||+.+.+. ..... ......+++|+|+|+++++++ .++. |.+|++.....+... ........+..+
T Consensus 107 ~~~i~v~d~~~~~~----~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 181 (331)
T 3u4y_A 107 PFNMQSYSFLKNKF----ISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNI 181 (331)
T ss_dssp SCEEEEEETTTTEE----EEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEE
T ss_pred cccEEEEECCCCCe----EEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccce
Confidence 899999987653 22222 334568999999998766654 4578 999998764332111 101122347889
Q ss_pred EEeCCCcEEE-EeCCCCcEEEEEcCCCce---eeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCCC
Q 026679 151 TFTPDGQYVV-SGSGDGTLHAWNINTRNE---VACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 151 ~~~~~~~~l~-~~~~dg~i~v~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~ 218 (235)
+|+|+|++++ ++..++.|++||+.+++. +..+.. ...+..++|+|+|+++++++ +.+.+||+++.+.
T Consensus 182 ~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 182 TFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 9999999665 555689999999999888 777764 36778999999999776654 5699999987654
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=2.1e-22 Score=151.26 Aligned_cols=199 Identities=8% Similarity=0.049 Sum_probs=155.8
Q ss_pred ccceeEEEeecCCCeeEEEec-------cceEEEEecCcceeeeeeeccCCc-eEEEcCCCCEEEEE-ecCCeEEEEecc
Q 026679 14 KERVISLCMSPVNDSFMSGSL-------DHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVFAVA-MEAGAIKLFDSR 84 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~-~~dg~v~i~d~~ 84 (235)
...+..++|+|+++.+++++. ++.|.+||..+++....+...... .++++|+++.++++ ..++.|.+||..
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 356788999999988887763 578999999999888888765443 49999999965555 557999999998
Q ss_pred CCCCCCceeEeecCCC---------cceeEEEEccCCCeEEEec--CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEe
Q 026679 85 SYDKGPFDTFLVGGDT---------AEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT 153 (235)
Q Consensus 85 ~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~ 153 (235)
+++. ......+. ..+.+++|+|+++.+++++ .++.|.+||..+++....+.... ..+..++|+
T Consensus 120 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~s 193 (353)
T 3vgz_A 120 TGEV----KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG--KMSTGLALD 193 (353)
T ss_dssp TCCE----EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC--TTCCCCEEE
T ss_pred CCee----EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC--CccceEEEC
Confidence 7653 22222221 1268899999999887776 47889999999998877665332 337789999
Q ss_pred CCCcEEEEeCCCCcEEEEEcCCCceeeeecC----CCcceeEEEeecCCCEEEEcc---cceEEeeCCCCCC
Q 026679 154 PDGQYVVSGSGDGTLHAWNINTRNEVACWNG----NIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 154 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~ 218 (235)
|++++|++++.++.|.+||..+++.+..+.. +...+.+++|+|+++++++++ +.+.+||..+.+.
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 9999999999999999999999988877653 455678899999999877765 6799999976543
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=5.2e-23 Score=153.49 Aligned_cols=206 Identities=9% Similarity=0.094 Sum_probs=154.5
Q ss_pred hhhhhhhhccccc--ceeEEEeecCCCee-EEEeccceEEEEecCcceeeeeeecc-------CCceEEEcCCCCEEEEE
Q 026679 3 DNRILRYFKGHKE--RVISLCMSPVNDSF-MSGSLDHSVRIWDLRVNACQGILRLR-------GRPTVAFDQQGLVFAVA 72 (235)
Q Consensus 3 ~~~~~~~~~~h~~--~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~ 72 (235)
+++.+..+..... .+..++|+|+++.+ ++++.++.|.+||+.+++....+... ....++|+|+++.++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 99 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIY 99 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEE
T ss_pred CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEE
Confidence 4555555553222 47899999999765 55666889999999998887766643 34459999999998888
Q ss_pred e------------cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeecc
Q 026679 73 M------------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 140 (235)
Q Consensus 73 ~------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 140 (235)
. .++.|.+||+.+.+. ..... ....+..++|+|++++++++ ++.|.+||+.+++....+..
T Consensus 100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~----~~~~~-~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~ 172 (337)
T 1pby_B 100 ESPVRLELTHFEVQPTRVALYDAETLSR----RKAFE-APRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp EEEEEECSSCEEECCCEEEEEETTTTEE----EEEEE-CCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECS
T ss_pred ecccccccccccccCceEEEEECCCCcE----EEEEe-CCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeec
Confidence 6 579999999976542 22222 23457789999999988888 68899999988876544432
Q ss_pred CC--C--------------------------------------------------------------CCcceeeEEeCCC
Q 026679 141 EP--S--------------------------------------------------------------PNTNTEATFTPDG 156 (235)
Q Consensus 141 ~~--~--------------------------------------------------------------~~~i~~~~~~~~~ 156 (235)
.. . ...+..++|+|++
T Consensus 173 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg 252 (337)
T 1pby_B 173 QSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK 252 (337)
T ss_dssp TTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTS
T ss_pred cccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCC
Confidence 21 0 0123458999999
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++ +.+++||+++.+.
T Consensus 253 ~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 253 TRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp SEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred CEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 999888 789999999999888777643 5678999999999888776 7799999977643
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=2.8e-24 Score=175.87 Aligned_cols=200 Identities=14% Similarity=0.111 Sum_probs=153.2
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC-----CceEEEcCCCCEEEEEecC---------CeEEE
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG-----RPTVAFDQQGLVFAVAMEA---------GAIKL 80 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~d---------g~v~i 80 (235)
..+.+++|+|||+++++ +.||+|++||+.+++....+..+. ...++|+|||+.|++++.+ +.+.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 35788999999997776 789999999999998887777665 3459999999999999764 78889
Q ss_pred EeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCC----------------
Q 026679 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---------------- 144 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---------------- 144 (235)
||+.+++. ........+...+..++|+|||+.|++++. +.|++||+.+++...........
T Consensus 96 ~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 96 SKIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EECCCCce--EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 99988663 111112234445888999999999998876 78999999888766544322211
Q ss_pred CcceeeEEeCCCcEEEEeCCCC----------------------------------cEEEEEcCCCceeeeecCC-----
Q 026679 145 NTNTEATFTPDGQYVVSGSGDG----------------------------------TLHAWNINTRNEVACWNGN----- 185 (235)
Q Consensus 145 ~~i~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~~~~~~~----- 185 (235)
..+..++|+|||++|++++.++ .|++||+.+++....+..+
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 1237899999999999886543 7999999888765555543
Q ss_pred -CcceeEEEeecCCCEEEEcc------cceEEeeCCCCCC
Q 026679 186 -IGVVACLKWAPRRAMFVAAS------SVLSFWIPNPSSN 218 (235)
Q Consensus 186 -~~~v~~~~~~~~~~~l~~~~------~~i~iw~~~~~~~ 218 (235)
...+..++|+|||+++++.. ..+++||+.+++.
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 56889999999999887653 4589999877653
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=2.8e-23 Score=170.40 Aligned_cols=200 Identities=12% Similarity=0.072 Sum_probs=154.3
Q ss_pred ccceeEEEeecCCCeeEEEec-cc-----eEEEEecCcceeeeeeeccC--------------------------CceEE
Q 026679 14 KERVISLCMSPVNDSFMSGSL-DH-----SVRIWDLRVNACQGILRLRG--------------------------RPTVA 61 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~-d~-----~i~vwd~~~~~~~~~~~~~~--------------------------~~~~~ 61 (235)
...+.+++|+|||++|++++. |+ .|++||+.+++....+..+. ...++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457999999999999999998 88 89999999988776665432 34489
Q ss_pred EcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccC
Q 026679 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE 141 (235)
Q Consensus 62 ~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 141 (235)
|+|||+.|++++. +.|.+||+.++.... ...+..+...+..++|+|||++|++++ ++.|++||+.+++........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~--~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAA--VRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTS--CCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcce--EEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCC
Confidence 9999999999887 999999998862000 223445667899999999999998887 468999999988765433322
Q ss_pred CCC--------------CcceeeEEeCCCcEEEEeCCCC---------------------------------cEEEEEcC
Q 026679 142 PSP--------------NTNTEATFTPDGQYVVSGSGDG---------------------------------TLHAWNIN 174 (235)
Q Consensus 142 ~~~--------------~~i~~~~~~~~~~~l~~~~~dg---------------------------------~i~v~d~~ 174 (235)
... ..+..++|+|||++|++++.|+ .|++||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 110 0147799999999999887665 78999998
Q ss_pred C-Cceeeeec--CCCcceeEEEeecCCCEEEEcc-------cceEEeeCCCCCC
Q 026679 175 T-RNEVACWN--GNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSSN 218 (235)
Q Consensus 175 ~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~~ 218 (235)
+ ++...... .|...+..++| |||++|++++ ..+++||+.++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 8 77654432 47778999999 9999998663 4589999877653
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=6.2e-23 Score=154.14 Aligned_cols=208 Identities=9% Similarity=0.090 Sum_probs=158.4
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeeccC-----------CceEEEcCCCCEEE
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLRG-----------RPTVAFDQQGLVFA 70 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~ 70 (235)
+++.+..+.. ...+..++|+|++++++ +...++.|.+||..+++....+..+. ...++++|+++.++
T Consensus 78 ~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 156 (353)
T 3vgz_A 78 TLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVY 156 (353)
T ss_dssp TCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEE
T ss_pred CCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEE
Confidence 3444444443 24477899999998554 55567999999999998888777643 23389999999887
Q ss_pred EEe--cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCC--CCCc
Q 026679 71 VAM--EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP--SPNT 146 (235)
Q Consensus 71 ~~~--~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~--~~~~ 146 (235)
++. .++.|.+||..+.+. ......+...+..++|+|+++.+++++.++.|.+||+.+++....+.... +...
T Consensus 157 ~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 157 ISGIGKESVIWVVDGGNIKL----KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp EEEESSSCEEEEEETTTTEE----EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred EEecCCCceEEEEcCCCCce----EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 776 478999999987653 33333344557889999999999999999999999999998877665422 2345
Q ss_pred ceeeEEeCCCcEEEEeCC-CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCC
Q 026679 147 NTEATFTPDGQYVVSGSG-DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSS 217 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~ 217 (235)
+..++|+|+++++++++. ++.|.+||..+++.+..+.... ...++|+|+++++++++ +.+.+||..+.+
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 778999999997766654 5899999999999887776443 36799999999665554 779999997654
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1e-22 Score=152.26 Aligned_cols=204 Identities=10% Similarity=0.060 Sum_probs=141.8
Q ss_pred hhcccccceeEEEeecCCCeeEEEec-cceEEEEec---CcceeeeeeeccC-CceEEEcCCCCEEEEEe-cCCeEEEEe
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSL-DHSVRIWDL---RVNACQGILRLRG-RPTVAFDQQGLVFAVAM-EAGAIKLFD 82 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~-d~~i~vwd~---~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~-~dg~v~i~d 82 (235)
.+..+. .+.+++|+|++++|++++. ++.|.+||+ ...+....+.... ...++|+|+++.+++++ .++.|.+||
T Consensus 79 ~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 79 ESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp EEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 344333 7889999999998776654 889999999 4444555554443 33499999999888887 899999999
Q ss_pred ccC-CCCCCcee-EeecCCCcceeEEEEccCCCeEEEec-CCCcEEEEEcCC--Cce--eeeec-cC---CCCCcceeeE
Q 026679 83 SRS-YDKGPFDT-FLVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYVLDAYG--GEK--RCGFS-LE---PSPNTNTEAT 151 (235)
Q Consensus 83 ~~~-~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~--~~~--~~~~~-~~---~~~~~i~~~~ 151 (235)
+.+ ++...... .........+..++|+|+++++++++ .++.|.+||+.. ++. ..... .. .....+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 986 33211000 11222335788899999999776554 789999999954 332 11111 11 1123466799
Q ss_pred EeCCCcEEE-EeCCCCcEEEEEcC----CCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCC
Q 026679 152 FTPDGQYVV-SGSGDGTLHAWNIN----TRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPN 214 (235)
Q Consensus 152 ~~~~~~~l~-~~~~dg~i~v~d~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~ 214 (235)
|+|+|++|+ ++..++.|.+||+. ..+.+..+..+.. +.+++|+|++++|++++ +.+.+|+++
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 999998887 55578999999998 2344445554444 89999999999887776 679999664
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.4e-22 Score=152.10 Aligned_cols=206 Identities=10% Similarity=0.123 Sum_probs=142.0
Q ss_pred hhhcccccceeEEEeecCCCeeEEEe-ccceEEEEecCc-c--eeeeeeeccC-----------CceEEEcCCCCEEEEE
Q 026679 8 RYFKGHKERVISLCMSPVNDSFMSGS-LDHSVRIWDLRV-N--ACQGILRLRG-----------RPTVAFDQQGLVFAVA 72 (235)
Q Consensus 8 ~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~i~vwd~~~-~--~~~~~~~~~~-----------~~~~~~~~~~~~l~~~ 72 (235)
..+..|...+..++|+|+|++|++++ .++.|.+|++.. + ..+..+.... ...++|+|+++++++.
T Consensus 79 ~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~ 158 (347)
T 3hfq_A 79 NTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVID 158 (347)
T ss_dssp EEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEE
T ss_pred eeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEe
Confidence 33445677889999999999888887 689999999963 2 2233332211 2238999999966666
Q ss_pred ecCCeEEEEeccC-CCCCCceeEeecCCCcceeEEEEccCCCeEEE-ecCCCcEEEEEcCC--Cceeee--eccCCC---
Q 026679 73 MEAGAIKLFDSRS-YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL-TTTNNNIYVLDAYG--GEKRCG--FSLEPS--- 143 (235)
Q Consensus 73 ~~dg~v~i~d~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~--~~~~~~--~~~~~~--- 143 (235)
..++.|.+|++.. +........ .......+..++|+|||+++++ ...++.|.+|++.. ++.... ......
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 237 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYT 237 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCC
T ss_pred CCCCEEEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCC
Confidence 6788999999983 221111111 1122335778999999996666 45688999999874 443222 211111
Q ss_pred -CCcceeeEEeCCCcEEE-EeCCCCcEEEEEcCC---CceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCC
Q 026679 144 -PNTNTEATFTPDGQYVV-SGSGDGTLHAWNINT---RNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPN 214 (235)
Q Consensus 144 -~~~i~~~~~~~~~~~l~-~~~~dg~i~v~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~ 214 (235)
...+..++|+|+|++|+ +...++.|.+|++.. .+.+..+..+...+..++|+|++++|++++ +.+.+|+++
T Consensus 238 ~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 238 AHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp SCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 13478899999999874 555689999999972 244555666666789999999999888775 669999554
No 142
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=1.2e-22 Score=160.82 Aligned_cols=193 Identities=10% Similarity=0.039 Sum_probs=154.0
Q ss_pred EeecCCCeeEEEeccceEEEEecCcceeeeeeec-cCCceEEEcCCCCEEEEEecCCeEEEEec--cCCCCCCceeEeec
Q 026679 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL-RGRPTVAFDQQGLVFAVAMEAGAIKLFDS--RSYDKGPFDTFLVG 97 (235)
Q Consensus 21 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~v~i~d~--~~~~~~~~~~~~~~ 97 (235)
.++|++..+++++.|++|.+||..+++.+..+.. +....++++|+++++++++.++.|.+||+ .+.+. ...+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~----~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK----VAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE----EEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcE----EEEEe
Confidence 4889898999999999999999999999998884 34345889999999999999999999999 55432 22333
Q ss_pred CCCcceeEEEEcc----CCCeEEEecC-CCcEEEEEcCCCceeeeeccCC--------C-CCcceeeEEeCCCc-EEEEe
Q 026679 98 GDTAEVCDIKFSN----DGKSMLLTTT-NNNIYVLDAYGGEKRCGFSLEP--------S-PNTNTEATFTPDGQ-YVVSG 162 (235)
Q Consensus 98 ~~~~~v~~~~~~~----~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~--------~-~~~i~~~~~~~~~~-~l~~~ 162 (235)
+...+..++|+| +|+++++++. +++|.+||..+++.+..+.... | ...+..+.++|++. ++++.
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 345679999999 9999998885 8999999999999888776532 1 12578899999765 45677
Q ss_pred CCCCcEEEEEcCCCceee--eecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCCCC
Q 026679 163 SGDGTLHAWNINTRNEVA--CWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSNS 219 (235)
Q Consensus 163 ~~dg~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~~ 219 (235)
..++.|.+||+.+.+.+. .+. +...+..+.|+|+++++++++ +.|.+||.++.++.
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 359 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE
Confidence 889999999998876544 343 556788999999999877654 67999999876543
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=1.5e-22 Score=151.80 Aligned_cols=208 Identities=12% Similarity=0.105 Sum_probs=153.5
Q ss_pred chhhhhhhhcccc-cceeEEEeecCCCee-EEEeccceEEEEecCcceeeeeeeccC--------CceEEEcCCCCEEEE
Q 026679 2 YDNRILRYFKGHK-ERVISLCMSPVNDSF-MSGSLDHSVRIWDLRVNACQGILRLRG--------RPTVAFDQQGLVFAV 71 (235)
Q Consensus 2 ~~~~~~~~~~~h~-~~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~ 71 (235)
.+++.++.+..+. ..+..++|+|+++.+ +++..++.|.+||+.+++....+.... ...++|+|+++.+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 108 (349)
T 1jmx_B 29 ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYA 108 (349)
T ss_dssp TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEE
T ss_pred CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEE
Confidence 3455666665443 257899999999865 455678999999999998877776433 345999999999999
Q ss_pred EecC------------CeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeec
Q 026679 72 AMEA------------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS 139 (235)
Q Consensus 72 ~~~d------------g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 139 (235)
++.+ +.|.+||+.+++.... . ....+...+.+++|+|+|+ +++++. .|.+||+.+++....+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~-~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 109 TVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP-V-RTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALP 183 (349)
T ss_dssp EEEEEEECSSCEEECCCEEEEEEGGGGGGBCC-S-EEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEEC
T ss_pred EcccccccccccccCCCeEEEEECCCccccce-e-eeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceecccc
Confidence 8865 8999999987432111 1 1112334688899999999 666543 49999999888766554
Q ss_pred cCCC------------------------------------------------------------------CCcceeeEEe
Q 026679 140 LEPS------------------------------------------------------------------PNTNTEATFT 153 (235)
Q Consensus 140 ~~~~------------------------------------------------------------------~~~i~~~~~~ 153 (235)
.... ...+..++|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 263 (349)
T 1jmx_B 184 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 263 (349)
T ss_dssp STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEec
Confidence 3310 0124466778
Q ss_pred C-CCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 154 P-DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 154 ~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+|++++|++++ +.+++||.++.+
T Consensus 264 p~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 264 PKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp SSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred CCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 9 99999888 88999999999988777763 34578999999998887765 779999997654
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=2.5e-22 Score=150.11 Aligned_cols=200 Identities=15% Similarity=0.191 Sum_probs=141.6
Q ss_pred ccccceeEEEeecCCCeeEEEecc-ceEEEEecC--cce--eeeeeeccC-CceEEEcCCCCEEEEEec-CCeEEEEecc
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLD-HSVRIWDLR--VNA--CQGILRLRG-RPTVAFDQQGLVFAVAME-AGAIKLFDSR 84 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d-~~i~vwd~~--~~~--~~~~~~~~~-~~~~~~~~~~~~l~~~~~-dg~v~i~d~~ 84 (235)
.|...+.+++|+|++++|++++.+ +.|++|++. +++ .+..+..+. ...++|+|+++.+++++. ++.|.+||+.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 466788999999999988888876 999999997 444 333444333 344999999998877665 8899999995
Q ss_pred CCCCCCceeEeecCCCcceeEEEEccCCCeEEEec-CCCcEEEEEcCC-Cceeee----eccCCCCCcceeeEEeCCCcE
Q 026679 85 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYVLDAYG-GEKRCG----FSLEPSPNTNTEATFTPDGQY 158 (235)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~-~~~~~~----~~~~~~~~~i~~~~~~~~~~~ 158 (235)
.+.. ............+.+++|+|+++++++++ .++.|.+||+.+ ++.... .... ....+..++|+|++++
T Consensus 115 ~~~~--~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 115 DGLP--VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV-EGAGPRHMVFHPNEQY 191 (343)
T ss_dssp TTEE--EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS-TTCCEEEEEECTTSSE
T ss_pred CCcc--ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccC-CCCCcceEEECCCCCE
Confidence 2211 11222223334688899999999888877 799999999987 544322 2222 2245788999999997
Q ss_pred EEE-eCCCCcEEEEEcCC--Cce--eeeec----CC--CcceeEEEeecCCCEEEEcc---cceEEeeCC
Q 026679 159 VVS-GSGDGTLHAWNINT--RNE--VACWN----GN--IGVVACLKWAPRRAMFVAAS---SVLSFWIPN 214 (235)
Q Consensus 159 l~~-~~~dg~i~v~d~~~--~~~--~~~~~----~~--~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~ 214 (235)
|++ +..++.|.+|++.. ++. ...+. ++ ...+..++|+|++++|+++. +.+.+|+++
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 755 45789999999953 332 22221 11 23566899999998887543 779999997
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=9.7e-23 Score=166.41 Aligned_cols=209 Identities=15% Similarity=0.108 Sum_probs=152.9
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCc-----ceeeeeeeccCC----------------ceEEEcCCCC
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRV-----NACQGILRLRGR----------------PTVAFDQQGL 67 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~-----~~~~~~~~~~~~----------------~~~~~~~~~~ 67 (235)
.+..+...+.+++|+|||+.|+++ .|+.|++||+.+ ++.......+.. ..++|+|||+
T Consensus 115 ~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 344567788999999999999985 689999999988 766554433322 4599999999
Q ss_pred EEEEEe---------------------------------cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCe
Q 026679 68 VFAVAM---------------------------------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKS 114 (235)
Q Consensus 68 ~l~~~~---------------------------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 114 (235)
.|++++ .+..|.+||+.+++... ......+...+.+++|+|||+.
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~ 271 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY--LQTGEPKEKFLTNLSWSPDENI 271 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE--CCCCSCTTCEEEEEEECTTSSE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe--eccCCCCceeEeeEEEECCCCE
Confidence 999987 34679999998754211 1111245677899999999999
Q ss_pred EEEecCCC-----cEEEEEcCCCceeeeeccCCCC---CcceeeEEeC--CCcEEEEeCCCCcEEEEEcC-CCceeeeec
Q 026679 115 MLLTTTNN-----NIYVLDAYGGEKRCGFSLEPSP---NTNTEATFTP--DGQYVVSGSGDGTLHAWNIN-TRNEVACWN 183 (235)
Q Consensus 115 l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~---~~i~~~~~~~--~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~ 183 (235)
|++++.++ .|++||+.+++....+...... ..+..++|+| +|+++++++.++.+++|++. ++..+..+.
T Consensus 272 l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 272 LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 99887765 8999999988333222211111 2246789999 99999999999999999886 677777777
Q ss_pred CCCcceeE-EEeecCCCEEEEcc---c----ceEEeeCCCCCCCC
Q 026679 184 GNIGVVAC-LKWAPRRAMFVAAS---S----VLSFWIPNPSSNST 220 (235)
Q Consensus 184 ~~~~~v~~-~~~~~~~~~l~~~~---~----~i~iw~~~~~~~~~ 220 (235)
.+...+.. ++|+|+++.|+.++ + .+..|++++.....
T Consensus 352 ~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 396 (706)
T 2z3z_A 352 KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKD 396 (706)
T ss_dssp CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEE
T ss_pred CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCcee
Confidence 77777876 79999999887664 2 35555555554333
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=6.2e-23 Score=150.15 Aligned_cols=197 Identities=12% Similarity=0.068 Sum_probs=142.7
Q ss_pred hhhhhhhccc-ccceeEEEeecCCCeeEEEe--ccceEEEEe--cCcceeeeeeeccCCceEEEcCCCCEEE-EEecCCe
Q 026679 4 NRILRYFKGH-KERVISLCMSPVNDSFMSGS--LDHSVRIWD--LRVNACQGILRLRGRPTVAFDQQGLVFA-VAMEAGA 77 (235)
Q Consensus 4 ~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~--~d~~i~vwd--~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~ 77 (235)
++....+.+| ...+.+++|+|++++|++++ .++...||. ..++.............++|+|+++.++ ++..++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 152 (297)
T 2ojh_A 73 PSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQV 152 (297)
T ss_dssp CSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTE
T ss_pred CCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCc
Confidence 4444455555 47889999999999999998 334555554 4444432222222333489999999877 7778999
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEec-CCCcEEEEEcC-CCceeeeeccCCCCCcceeeEEeCC
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYVLDAY-GGEKRCGFSLEPSPNTNTEATFTPD 155 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~-~~~~~~~~~~~~~~~~i~~~~~~~~ 155 (235)
+.+|++..... ....+..+...+.+++|+|+++.|++++ .++.+.+|++. .+.....+ ..+...+..++|+|+
T Consensus 153 ~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~s~d 227 (297)
T 2ojh_A 153 FDIYSMDIDSG---VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI--TDSAYGDWFPHPSPS 227 (297)
T ss_dssp EEEEEEETTTC---CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC--CCCSEEEEEEEECTT
T ss_pred eEEEEEECCCC---cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE--ecCCcccCCeEECCC
Confidence 99999754322 1344556777899999999999888766 48889999876 34444333 334456888999999
Q ss_pred CcEEEEeCCC-----------CcEEEEEcCCCcee--eeecCCCcceeEEEeecCCCEEEEcc
Q 026679 156 GQYVVSGSGD-----------GTLHAWNINTRNEV--ACWNGNIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 156 ~~~l~~~~~d-----------g~i~v~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~ 205 (235)
|++|++++.+ +.|++||+.+++.. ..+.+|...+..++|+|++++|++++
T Consensus 228 g~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 228 GDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp SSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred CCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 9999888765 56999999887653 34447788899999999999998886
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=9.4e-23 Score=166.83 Aligned_cols=210 Identities=12% Similarity=0.035 Sum_probs=148.0
Q ss_pred hhhhhhhhccccc---ceeEEEeecCCCeeEEEecc---------ceEEEEecCcceeeeeeec--cC--CceEEEcCCC
Q 026679 3 DNRILRYFKGHKE---RVISLCMSPVNDSFMSGSLD---------HSVRIWDLRVNACQGILRL--RG--RPTVAFDQQG 66 (235)
Q Consensus 3 ~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~d---------~~i~vwd~~~~~~~~~~~~--~~--~~~~~~~~~~ 66 (235)
+++....+.+|.. .|.+++|||||++|++++.+ +.+++||+.+++....... +. ...++|+|+|
T Consensus 46 ~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG 125 (723)
T 1xfd_A 46 TNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKG 125 (723)
T ss_dssp GCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSST
T ss_pred CCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCC
Confidence 4555555666654 49999999999999998764 7888999998876322221 11 3448999999
Q ss_pred CEEEEEecCCeEEEEeccCCCCCCceeEeecCCCc------------------ceeEEEEccCCCeEEEecCCC------
Q 026679 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTA------------------EVCDIKFSNDGKSMLLTTTNN------ 122 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~~d~------ 122 (235)
+.|+.++. +.|++||+.+++. ......+.. .+.+++|+|||+.|++++.++
T Consensus 126 ~~la~~~~-~~i~~~~~~~g~~----~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~ 200 (723)
T 1xfd_A 126 QQLIFIFE-NNIYYCAHVGKQA----IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIM 200 (723)
T ss_dssp TCEEEEET-TEEEEESSSSSCC----EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEE
T ss_pred CEEEEEEC-CeEEEEECCCCce----EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceE
Confidence 99999886 7999999987654 222222222 237899999999999887543
Q ss_pred ----------------------------cEEEEEcCCCceeeeeccCC----CCCcceeeEEeCCCcEEEEeCC----CC
Q 026679 123 ----------------------------NIYVLDAYGGEKRCGFSLEP----SPNTNTEATFTPDGQYVVSGSG----DG 166 (235)
Q Consensus 123 ----------------------------~i~~~d~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~----dg 166 (235)
.|++||+.+++....+..+. +...+..++|+|||++|++... +.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 280 (723)
T 1xfd_A 201 ELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVS 280 (723)
T ss_dssp EECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEE
T ss_pred EeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeE
Confidence 79999998887544433221 2356888999999999876543 35
Q ss_pred cEEEEEcCCCceeeeecC-CCcce----eEEEeecCCCEEEEc-c---c------ceEEee-CCCCC
Q 026679 167 TLHAWNINTRNEVACWNG-NIGVV----ACLKWAPRRAMFVAA-S---S------VLSFWI-PNPSS 217 (235)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~-~~~~v----~~~~~~~~~~~l~~~-~---~------~i~iw~-~~~~~ 217 (235)
.|++||+.+++....+.. +...+ ..++|+|||+.|+.. + + .+.+|+ ..+..
T Consensus 281 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 281 ILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred EEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 799999999887665543 33333 378999999987754 2 4 366666 34444
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=2e-22 Score=164.62 Aligned_cols=193 Identities=9% Similarity=0.050 Sum_probs=142.8
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC-CceEEEcCCCCEEEEEecCCeEEEEeccC-----CCC
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG-RPTVAFDQQGLVFAVAMEAGAIKLFDSRS-----YDK 88 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~dg~v~i~d~~~-----~~~ 88 (235)
..|.+++|+|+ +.++.+ .++.|++||+.+++......... ...++|+|+|+.|+++ .++.|++||+.+ ++.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 56999999999 665555 35999999999887665544322 3449999999999985 789999999987 543
Q ss_pred CCceeEeecCCCcc--------------eeEEEEccCCCeEEEec---------------------------------CC
Q 026679 89 GPFDTFLVGGDTAE--------------VCDIKFSNDGKSMLLTT---------------------------------TN 121 (235)
Q Consensus 89 ~~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d 121 (235)
......+... +.++.|+|||++|++++ .+
T Consensus 159 ----~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 159 ----IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp ----EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred ----EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 2112222222 47899999999999987 34
Q ss_pred CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC-----cEEEEEcCCCceeeeec--CCCc---ceeE
Q 026679 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG-----TLHAWNINTRNEVACWN--GNIG---VVAC 191 (235)
Q Consensus 122 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~--~~~~---~v~~ 191 (235)
..|++||+.+++.........+...+..++|+|||++|++++.++ .|++||+.+++....+. .+.. .+..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 679999999887655443334556789999999999999877665 89999999884333332 1221 3467
Q ss_pred EEeec--CCCEEEEcc--cceEEeeCC
Q 026679 192 LKWAP--RRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 192 ~~~~~--~~~~l~~~~--~~i~iw~~~ 214 (235)
+.|+| +|+++++++ +.+++|.++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEE
Confidence 89999 999888876 668888775
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=6.5e-22 Score=162.33 Aligned_cols=204 Identities=10% Similarity=0.062 Sum_probs=154.6
Q ss_pred hhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCC------------------ceEEEcCCCC
Q 026679 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR------------------PTVAFDQQGL 67 (235)
Q Consensus 6 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 67 (235)
.+..+..|...+.+++|+|||++|+.++ ++.|++||+.+++.......+.. ..++|+|||+
T Consensus 143 ~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~ 221 (741)
T 2ecf_A 143 AVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS 221 (741)
T ss_dssp SCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS
T ss_pred eEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC
Confidence 3456777888999999999999999887 46899999998876655443332 4599999999
Q ss_pred EEEEEecCC---------------------------------eEEEEeccC-CCCCCceeEeec-CCCcceeEEEEccCC
Q 026679 68 VFAVAMEAG---------------------------------AIKLFDSRS-YDKGPFDTFLVG-GDTAEVCDIKFSNDG 112 (235)
Q Consensus 68 ~l~~~~~dg---------------------------------~v~i~d~~~-~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 112 (235)
.|++++.|+ .|.+||+.+ ++. ...... .+...+..++| |||
T Consensus 222 ~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg 297 (741)
T 2ecf_A 222 AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDP 297 (741)
T ss_dssp CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EET
T ss_pred EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce---EEecCCCCcceEEEEEEe-CCC
Confidence 999987765 788899877 553 111111 46778999999 999
Q ss_pred CeEEEecC-----CCcEEEEEcCCCceeeeeccCCCC--CcceeeEEeCCCcEEEEeCCCCcEEEEEcC-CCceeeeecC
Q 026679 113 KSMLLTTT-----NNNIYVLDAYGGEKRCGFSLEPSP--NTNTEATFTPDGQYVVSGSGDGTLHAWNIN-TRNEVACWNG 184 (235)
Q Consensus 113 ~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~ 184 (235)
+.|++++. +..|++||+.+++....+..+... ..+..++|+|||+++++++.||.+++|.+. +++ ...+..
T Consensus 298 ~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~ 376 (741)
T 2ecf_A 298 QHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH 376 (741)
T ss_dssp TEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC
T ss_pred CEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee
Confidence 99987654 567999999998876655433211 135679999999999999999988888765 445 677777
Q ss_pred CCcceeEE-EeecCCCEEEEcc---c--ceEEeeCCC
Q 026679 185 NIGVVACL-KWAPRRAMFVAAS---S--VLSFWIPNP 215 (235)
Q Consensus 185 ~~~~v~~~-~~~~~~~~l~~~~---~--~i~iw~~~~ 215 (235)
+...+..+ .|+|+++.|+..+ + .+++|+++.
T Consensus 377 ~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 377 GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 77788887 5999998776543 3 789998853
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=7e-22 Score=158.06 Aligned_cols=205 Identities=14% Similarity=0.029 Sum_probs=147.3
Q ss_pred hhhhhhhhccc-ccceeEEEeecCCCeeEEEec-cceEEEEecCcceeeeeeeccC--CceEEEcCCCCEEEEEec---C
Q 026679 3 DNRILRYFKGH-KERVISLCMSPVNDSFMSGSL-DHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVFAVAME---A 75 (235)
Q Consensus 3 ~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~---d 75 (235)
-.++++.++.+ ..+|.+++|+|||+.||+++. ||+++||+++.++..+....+. ...++|+|+ +++++++. +
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~ 87 (582)
T 3o4h_A 9 FSRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGA 87 (582)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTS
T ss_pred HHHHHHHHHHHhccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCC
Confidence 34556666543 568999999999999998887 9999999997776655544442 334889999 77777765 4
Q ss_pred CeEEEEeccC--CCCCCceeEeecCCCcceeEEEEccCCCe-EEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEE
Q 026679 76 GAIKLFDSRS--YDKGPFDTFLVGGDTAEVCDIKFSNDGKS-MLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATF 152 (235)
Q Consensus 76 g~v~i~d~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 152 (235)
....+|.+.. ... . . .+... ......+|+|+|+. +++...++.+.+||+.+++......... .+++|
T Consensus 88 ~~~~l~~~~~~~~g~--~-~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-----~~~~~ 157 (582)
T 3o4h_A 88 EQHALFKVNTSRPGE--E-Q-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-----FGFVS 157 (582)
T ss_dssp CCEEEEEEETTSTTC--C-E-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-----CEEEE
T ss_pred cceEEEEEeccCCCc--c-c-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-----ceEEE
Confidence 5567766654 222 1 1 22222 23446688888864 3344445556699999887655443221 67899
Q ss_pred eCCCcEEEEeCCC----CcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--c--ceEEeeCCCCCCC
Q 026679 153 TPDGQYVVSGSGD----GTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--S--VLSFWIPNPSSNS 219 (235)
Q Consensus 153 ~~~~~~l~~~~~d----g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~i~iw~~~~~~~~ 219 (235)
+|||++|++++.+ +.|++||+.+++.. .+..|...+..++|+|||++|++++ + .|++||++++...
T Consensus 158 spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 9999999988776 78999999888765 6677888899999999999999665 5 6999999876554
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=3.8e-21 Score=144.34 Aligned_cols=201 Identities=14% Similarity=0.197 Sum_probs=136.5
Q ss_pred ccccceeEEEeecCCCeeEEEec---cceEEEEecCccee--eeeeecc--CCceEEEcCCCCEEEEEe-cCCeEEEEec
Q 026679 12 GHKERVISLCMSPVNDSFMSGSL---DHSVRIWDLRVNAC--QGILRLR--GRPTVAFDQQGLVFAVAM-EAGAIKLFDS 83 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~---d~~i~vwd~~~~~~--~~~~~~~--~~~~~~~~~~~~~l~~~~-~dg~v~i~d~ 83 (235)
.+......++|+|+|+ |++++. ++.|++|++.+++. +..+..+ ....++|+|++++|++++ .++.+.+|++
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3456678899999999 655554 68999999977653 3332222 234499999999888887 6899999999
Q ss_pred cCCCC-CCceeEeecC-------CCcceeEEEEccCCCeEEEecCCCcEEEEEcC-CCceeeee--ccCCCCCcceeeEE
Q 026679 84 RSYDK-GPFDTFLVGG-------DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY-GGEKRCGF--SLEPSPNTNTEATF 152 (235)
Q Consensus 84 ~~~~~-~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~~~~~--~~~~~~~~i~~~~~ 152 (235)
..... .........+ ....+.+++|+|+|+.+++...++.|.+|++. +++..... .... ...+..++|
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-g~~p~~~~~ 194 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA-GFGPRHLVF 194 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT-TCCEEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC-CCCCceEEE
Confidence 64221 1111111111 12347889999999966666678899999998 45433221 2222 234678999
Q ss_pred eCCCcEEEE-eCCCCcEEEEEcCC--Cce--eeeecCCC------cceeEEEeecCCCEEEEcc---cceEEeeCC
Q 026679 153 TPDGQYVVS-GSGDGTLHAWNINT--RNE--VACWNGNI------GVVACLKWAPRRAMFVAAS---SVLSFWIPN 214 (235)
Q Consensus 153 ~~~~~~l~~-~~~dg~i~v~d~~~--~~~--~~~~~~~~------~~v~~~~~~~~~~~l~~~~---~~i~iw~~~ 214 (235)
+|+|++|++ +..++.|.+|++.. ++. +..+.... ..+..++|+|+|++|++++ +.+.+|+++
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 999996655 56788999999874 442 22222221 4588999999999885543 679999986
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.6e-21 Score=146.15 Aligned_cols=193 Identities=11% Similarity=0.072 Sum_probs=142.7
Q ss_pred EEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC---CceEEEcCCCCEEE-EEecCCeEEEEeccCCCCCCceeE
Q 026679 19 SLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG---RPTVAFDQQGLVFA-VAMEAGAIKLFDSRSYDKGPFDTF 94 (235)
Q Consensus 19 ~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~ 94 (235)
.+++++++.++++++.++.|++||+.+++....+..+. ...++|+|+++.++ ++..++.|.+||+.+++. ..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~----~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN----TF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE----EE
Confidence 45788888899999999999999999999888887655 34599999998665 445689999999987543 22
Q ss_pred eec-CC-----CcceeEEEEccCCCeEEEecCC------------CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC
Q 026679 95 LVG-GD-----TAEVCDIKFSNDGKSMLLTTTN------------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG 156 (235)
Q Consensus 95 ~~~-~~-----~~~v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 156 (235)
... .+ ...+..++|+|+|+++++++.+ +.|.+||+.+++.........+...+.+++|+|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 222 11 2337789999999999998865 89999999885543322211222357889999999
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCCC--------------------------------------------------
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGNI-------------------------------------------------- 186 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-------------------------------------------------- 186 (235)
+ +++++. .|++||..+++.+..+..+.
T Consensus 160 ~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 555544 39999999888766554221
Q ss_pred ------------------cceeEEEeec-CCCEEEEcccceEEeeCCCCCC
Q 026679 187 ------------------GVVACLKWAP-RRAMFVAASSVLSFWIPNPSSN 218 (235)
Q Consensus 187 ------------------~~v~~~~~~~-~~~~l~~~~~~i~iw~~~~~~~ 218 (235)
..+..++|+| ++++++++.+.+.+||+++.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~v~~~d~~~~~~ 287 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKL 287 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEE
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEEcCeEEEEECccCeE
Confidence 1345677789 9999988888899999976543
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.89 E-value=1.1e-21 Score=166.32 Aligned_cols=199 Identities=8% Similarity=0.048 Sum_probs=158.1
Q ss_pred hhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeecc-------------CCceEEEc-CCCCEEEEE
Q 026679 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-------------GRPTVAFD-QQGLVFAVA 72 (235)
Q Consensus 7 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-------------~~~~~~~~-~~~~~l~~~ 72 (235)
.+.+..|. .+...+|+|+|+.|+.+ .++.|++||+..... ..+..+ ....++|+ |+|+.++++
T Consensus 238 ~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~ 314 (1045)
T 1k32_A 238 LRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFV 314 (1045)
T ss_dssp CEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEE
T ss_pred ceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEE
Confidence 34455554 46778999999988887 489999999844433 344332 24459999 999999888
Q ss_pred ecCCeEEEEeccCCCCCCceeEeecCCCc-ceeEEEEccCCCeEEEecCCCcEE-EEEcCCCceeeeeccCCCCCcceee
Q 026679 73 MEAGAIKLFDSRSYDKGPFDTFLVGGDTA-EVCDIKFSNDGKSMLLTTTNNNIY-VLDAYGGEKRCGFSLEPSPNTNTEA 150 (235)
Q Consensus 73 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~-~~d~~~~~~~~~~~~~~~~~~i~~~ 150 (235)
+ ++.+.+|++.... ...+..+.. .+..++|+ +|+.|++++.++.+. +||+.+++.... . .+...+..+
T Consensus 315 ~-~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l-~--~~~~~~~~~ 384 (1045)
T 1k32_A 315 S-RGQAFIQDVSGTY-----VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF-E--ENLGNVFAM 384 (1045)
T ss_dssp E-TTEEEEECTTSSB-----EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC-C--CCCCSEEEE
T ss_pred E-cCEEEEEcCCCCc-----eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe-c--CCccceeee
Confidence 7 7899999987654 233455666 88999999 999999998888898 999987765432 2 445678999
Q ss_pred EEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--c----------ceEEeeCCCCCC
Q 026679 151 TFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--S----------VLSFWIPNPSSN 218 (235)
Q Consensus 151 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~----------~i~iw~~~~~~~ 218 (235)
+|+|+|++|++++.++.|++||+.+++.......|...+.+++|+|||++|++++ + .+++||+++...
T Consensus 385 ~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 385 GVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred EECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 9999999999999999999999999988877778888999999999999998875 3 799999987653
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=3.6e-22 Score=163.35 Aligned_cols=194 Identities=13% Similarity=0.105 Sum_probs=143.8
Q ss_pred eEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC-----CceEEEcCCCCEEEEEec---------CCeEEEEec
Q 026679 18 ISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG-----RPTVAFDQQGLVFAVAME---------AGAIKLFDS 83 (235)
Q Consensus 18 ~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~---------dg~v~i~d~ 83 (235)
.+++|+|+|+++++ +.|++|++||+.+++....+..+. ...++|+|||+.|++++. ++.+++||+
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 37899999965554 469999999999998877776552 556999999999998876 789999999
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCC-----------------c
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPN-----------------T 146 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~-----------------~ 146 (235)
.+++.... ..+ ...+..++|+|||+.|+.+. ++.|++||+.+++..... ...+.. .
T Consensus 98 ~~g~~~~~--~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 98 SNGEFVRG--NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp TTTEECCS--SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCS
T ss_pred CCCccccc--eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccC
Confidence 87653100 111 24588899999999999885 789999999887765432 122211 1
Q ss_pred ceeeEEeCCCcEEEEeCCCC----------------------------------cEEEEEcCCCcee--------eeecC
Q 026679 147 NTEATFTPDGQYVVSGSGDG----------------------------------TLHAWNINTRNEV--------ACWNG 184 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~dg----------------------------------~i~v~d~~~~~~~--------~~~~~ 184 (235)
...++|+|||++|++++.|. .|++||+.+++.. ..+.+
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC
Confidence 24799999999999887542 7889999887653 22346
Q ss_pred CCcceeEEEeecCCCEEEEcc------cceEEee----CCCCCCC
Q 026679 185 NIGVVACLKWAPRRAMFVAAS------SVLSFWI----PNPSSNS 219 (235)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~~~~------~~i~iw~----~~~~~~~ 219 (235)
|...+..++|+||++++++.. ..|.+|+ .++++..
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 778899999999988777643 2388888 6655443
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=2.8e-21 Score=163.90 Aligned_cols=190 Identities=13% Similarity=0.046 Sum_probs=152.8
Q ss_pred cccceeEEEee-cCCCeeEEEeccceEEEEecCcceeeeeeeccCC---ceEEEcCCCCEEEEEecCCeEE-EEeccCCC
Q 026679 13 HKERVISLCMS-PVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR---PTVAFDQQGLVFAVAMEAGAIK-LFDSRSYD 87 (235)
Q Consensus 13 h~~~v~~~~~~-~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~dg~v~-i~d~~~~~ 87 (235)
|...+.+++|+ |+|+.|++++ ++.+.+|++..+.... +..+.. ..++|+ +++.++.++.++.+. +||+....
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 55679999999 9999999887 7899999998776544 333322 238899 999999998888888 88987654
Q ss_pred CCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC-
Q 026679 88 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG- 166 (235)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg- 166 (235)
. ..+..+...+..++|+|||++|++++.++.|++||+.+++...... .+...+..++|+|||++|++++.++
T Consensus 371 ~-----~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 371 A-----EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER--SREAMITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp E-----EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSSCCCCEEECTTSCEEEEEEEECS
T ss_pred c-----eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc--CCCCCccceEECCCCCeEEEEecCcc
Confidence 2 2333677889999999999999999999999999999988766543 3445688999999999998887644
Q ss_pred ---------cEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeC
Q 026679 167 ---------TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 167 ---------~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
.|++||+.+++ +..+..|...+..++|+|+|++|++++ +...+|+.
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred ccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 89999998877 666777888889999999999998877 44666654
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=4.4e-22 Score=162.86 Aligned_cols=214 Identities=12% Similarity=0.077 Sum_probs=148.0
Q ss_pred hhhhhhhhccccc---ceeEEEeecCCCeeEEEec---------cceEEEEecCcceee--eeeeccCCceEEEcCCCCE
Q 026679 3 DNRILRYFKGHKE---RVISLCMSPVNDSFMSGSL---------DHSVRIWDLRVNACQ--GILRLRGRPTVAFDQQGLV 68 (235)
Q Consensus 3 ~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~~~---------d~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~ 68 (235)
+++....+.+|.. .+.+++|||||++|++++. |+.|++||+.+++.. ..+. .....++|+|||+.
T Consensus 45 ~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-~~~~~~~~SPDG~~ 123 (719)
T 1z68_A 45 TGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-RPIQYLCWSPVGSK 123 (719)
T ss_dssp SCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-SSBCCEEECSSTTC
T ss_pred CCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC-cccccceECCCCCE
Confidence 3444444444443 3899999999999998876 789999999988763 1221 23445999999999
Q ss_pred EEEEecCCeEEEEeccCCCCCCceeEeecCCCcce-----------------eEEEEccCCCeEEEecCCC---------
Q 026679 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEV-----------------CDIKFSNDGKSMLLTTTNN--------- 122 (235)
Q Consensus 69 l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~--------- 122 (235)
|+.+. ++.|++||+.+++.. .....++...+ .+++|+|||+.|++++.|.
T Consensus 124 la~~~-~~~i~~~~~~~g~~~---~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~ 199 (719)
T 1z68_A 124 LAYVY-QNNIYLKQRPGDPPF---QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYS 199 (719)
T ss_dssp EEEEE-TTEEEEESSTTSCCE---ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEE
T ss_pred EEEEE-CCeEEEEeCCCCCcE---EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEee
Confidence 99885 789999999876531 11112222212 4899999999999987652
Q ss_pred -------------------------cEEEEEcCCCcee--eeec----cCCCCCcceeeEEeCCCcEEEEeCCC----Cc
Q 026679 123 -------------------------NIYVLDAYGGEKR--CGFS----LEPSPNTNTEATFTPDGQYVVSGSGD----GT 167 (235)
Q Consensus 123 -------------------------~i~~~d~~~~~~~--~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d----g~ 167 (235)
.|++||+.+++.. ..+. +..+...+..++|+||++++++.... ..
T Consensus 200 ~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~ 279 (719)
T 1z68_A 200 YYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSV 279 (719)
T ss_dssp ECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEE
T ss_pred ccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEE
Confidence 7889999887642 1111 12355668999999998877764322 34
Q ss_pred EEEEE----cCCCceeeee----cCCCccee-----EEEeecCCCEEEE--cc--c--ceEEeeCCCCCCCCC
Q 026679 168 LHAWN----INTRNEVACW----NGNIGVVA-----CLKWAPRRAMFVA--AS--S--VLSFWIPNPSSNSTD 221 (235)
Q Consensus 168 i~v~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~~~~~l~~--~~--~--~i~iw~~~~~~~~~~ 221 (235)
|.+|| ..+++....+ ..|...+. .+.|+|||+.++. +. + .+.+|++++.....+
T Consensus 280 l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~l 352 (719)
T 1z68_A 280 LSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQI 352 (719)
T ss_dssp EEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEEC
T ss_pred EEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEec
Confidence 88999 8777776655 46666676 8899999996654 22 3 477778766554333
No 157
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=7.4e-21 Score=156.07 Aligned_cols=195 Identities=11% Similarity=0.097 Sum_probs=146.1
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCc-----e--EEEcCCCCEEEEEecC---------Ce
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-----T--VAFDQQGLVFAVAMEA---------GA 77 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-----~--~~~~~~~~~l~~~~~d---------g~ 77 (235)
.....++.|+|+|++++++ |++|++||+.+++....+..+... . ++|+|||+.|+.++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 4456789999999888886 899999999999887777766422 2 7899999999998876 56
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCc-----------
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNT----------- 146 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~----------- 146 (235)
+.+||+.+++. ..+..+...+...+|||||+.|+.+ .++.|++||+.+++..+. ....+...
T Consensus 94 ~~~~d~~~~~~-----~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l-t~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 94 YDIYDLNKRQL-----ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI-TWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEETTTTEE-----CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC-CSCCBTTTEEESBCCHHHH
T ss_pred EEEEECCCCcE-----EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEE-cCCCCccceecCccccccc
Confidence 67999988653 2344566789999999999999888 468999999988775432 22222211
Q ss_pred ------ceeeEEeCCCcEEEEeCCC------------------------------------CcEEEEEcCC---Cc--ee
Q 026679 147 ------NTEATFTPDGQYVVSGSGD------------------------------------GTLHAWNINT---RN--EV 179 (235)
Q Consensus 147 ------i~~~~~~~~~~~l~~~~~d------------------------------------g~i~v~d~~~---~~--~~ 179 (235)
...+.|||||++|+.++.| ..|++||+.+ ++ ..
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCE
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceE
Confidence 2358899999999886422 1588899988 73 22
Q ss_pred eeec------CCCcceeEEEeecCCCEEEEcc------cceEEeeCCCCC
Q 026679 180 ACWN------GNIGVVACLKWAPRRAMFVAAS------SVLSFWIPNPSS 217 (235)
Q Consensus 180 ~~~~------~~~~~v~~~~~~~~~~~l~~~~------~~i~iw~~~~~~ 217 (235)
..+. +|...+..++|+|||+.++... ..|.+||+++++
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 2333 3777899999999999766553 359999987765
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=3.6e-20 Score=138.06 Aligned_cols=184 Identities=13% Similarity=0.095 Sum_probs=139.5
Q ss_pred CeeEEEeccceEEEEecCcceeeeeeeccC----CceEEEcCCCCEEE-EEecCCeEEEEeccCCCCCCceeEeecC---
Q 026679 27 DSFMSGSLDHSVRIWDLRVNACQGILRLRG----RPTVAFDQQGLVFA-VAMEAGAIKLFDSRSYDKGPFDTFLVGG--- 98 (235)
Q Consensus 27 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~~~~~--- 98 (235)
+++++++.++.|++||+.+++....+.... ...++|+|+++.++ ++..++.|.+||+.+++. ........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET--LGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE--EEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe--EeeEEcCCccc
Confidence 478999999999999999999888887554 34599999997665 455678999999987653 11122111
Q ss_pred CCcceeEEEEccCCCeEEEec------------CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC
Q 026679 99 DTAEVCDIKFSNDGKSMLLTT------------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 166 (235)
Q Consensus 99 ~~~~v~~~~~~~~~~~l~~~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (235)
+...+..++|+|+|++++++. .++.|.+||+.+++....+... ..+..++|+|++++|+++ ++
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP---RQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC---SSCCCEEECTTSSCEEEE--SS
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC---CCcceeEECCCCCEEEEe--CC
Confidence 122567899999999988886 5799999999988877666543 346789999999988887 57
Q ss_pred cEEEEEcCCCceeeeecCCC------------------------------------------------------------
Q 026679 167 TLHAWNINTRNEVACWNGNI------------------------------------------------------------ 186 (235)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~------------------------------------------------------------ 186 (235)
.|++||+.+++.+..+..+.
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 89999998876654432211
Q ss_pred ------cceeEEEeecCCCEEEEcccceEEeeCCCCC
Q 026679 187 ------GVVACLKWAPRRAMFVAASSVLSFWIPNPSS 217 (235)
Q Consensus 187 ------~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~ 217 (235)
..+.+++|+|++++++++++.+.+||+++.+
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~~~~v~~~d~~~~~ 271 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNA 271 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEESEEEEEETTTTE
T ss_pred ecCCCCCceeeEEECCCCCEEEEeCCeEEEEECCCCc
Confidence 1244689999999999888889999987654
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=7.3e-20 Score=138.08 Aligned_cols=199 Identities=11% Similarity=0.120 Sum_probs=135.0
Q ss_pred cccceeEEEeecCCCeeEEEe-ccceEEEEecCcceeeeee----e--ccC----------CceEEEcCCCCEEEEEe-c
Q 026679 13 HKERVISLCMSPVNDSFMSGS-LDHSVRIWDLRVNACQGIL----R--LRG----------RPTVAFDQQGLVFAVAM-E 74 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~----~--~~~----------~~~~~~~~~~~~l~~~~-~ 74 (235)
+......+++ ++++|++++ .++.|.+|++.....+..+ . ... ...++|+|+++.+++++ .
T Consensus 98 ~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 175 (361)
T 3scy_A 98 MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG 175 (361)
T ss_dssp SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC
Confidence 4445666777 777777665 5889999999754322211 1 111 13489999999766655 4
Q ss_pred CCeEEEEeccCCCC----C-Cce----eEeecCCCcceeEEEEccCCCeEEEec-CCCcEEEEEcCCCceeeeecc---C
Q 026679 75 AGAIKLFDSRSYDK----G-PFD----TFLVGGDTAEVCDIKFSNDGKSMLLTT-TNNNIYVLDAYGGEKRCGFSL---E 141 (235)
Q Consensus 75 dg~v~i~d~~~~~~----~-~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~---~ 141 (235)
++.+.+|++..... . ... .............++|+|+|+++++++ .++.|.+||+.+++....... .
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~ 255 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADT 255 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCS
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCC
Confidence 88999999876442 1 100 112223445678999999999887776 589999999987754322221 2
Q ss_pred CCCCcceeeEEeCCCcEEEEeCC--CCcEEEEEcC--CCc--eeeeecCCCcceeEEEeecCCCEEEEcc---cceEEee
Q 026679 142 PSPNTNTEATFTPDGQYVVSGSG--DGTLHAWNIN--TRN--EVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWI 212 (235)
Q Consensus 142 ~~~~~i~~~~~~~~~~~l~~~~~--dg~i~v~d~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~ 212 (235)
.+......++|+|+|++|+++.. ++.|.+|++. +++ .+..+.. ...+.+++|+|+|++|++++ +.+.+|+
T Consensus 256 ~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 256 VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence 22234678999999999876655 4889999995 444 3444443 45788999999999888875 6699976
Q ss_pred CC
Q 026679 213 PN 214 (235)
Q Consensus 213 ~~ 214 (235)
++
T Consensus 335 ~d 336 (361)
T 3scy_A 335 RD 336 (361)
T ss_dssp EC
T ss_pred EE
Confidence 65
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=4.3e-20 Score=139.62 Aligned_cols=197 Identities=10% Similarity=0.060 Sum_probs=138.3
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecC-cceeeeeeec--cC-CceEEEcCCCCE--EEEEe-------------cC
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLR-VNACQGILRL--RG-RPTVAFDQQGLV--FAVAM-------------EA 75 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~--~~-~~~~~~~~~~~~--l~~~~-------------~d 75 (235)
..+..++|+|+|++|++++.+ .|.+|++. +++....... .. ...++++|+|+. ++++. .+
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 467899999999999998888 99999997 6765543332 12 223889999994 44543 68
Q ss_pred CeEEEEeccC-CCCCCceeEee--cCCCcceeEEEEccCCCeEEEecC-CCcEEEEEcC-CCceeee--eccCCCCCcce
Q 026679 76 GAIKLFDSRS-YDKGPFDTFLV--GGDTAEVCDIKFSNDGKSMLLTTT-NNNIYVLDAY-GGEKRCG--FSLEPSPNTNT 148 (235)
Q Consensus 76 g~v~i~d~~~-~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~-~~~~~~~--~~~~~~~~~i~ 148 (235)
|.+.+|++.. ++.. ..... ..+...+.+++|+|+|++++++.. ++.|++||+. +++.... +....+...+.
T Consensus 119 g~v~v~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 119 GYGNVFSVSETGKLE--KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp CEEEEEEECTTCCEE--EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred ceEEEEccCCCCcCc--ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 9999999974 3211 11111 124467889999999998887654 6799999998 6665322 22222234578
Q ss_pred eeEEeCCCcEEEEeCC-CCcEEEEEcC--CCcee------eeec----CCCc------ceeEEE-eecCCCEEEEcc---
Q 026679 149 EATFTPDGQYVVSGSG-DGTLHAWNIN--TRNEV------ACWN----GNIG------VVACLK-WAPRRAMFVAAS--- 205 (235)
Q Consensus 149 ~~~~~~~~~~l~~~~~-dg~i~v~d~~--~~~~~------~~~~----~~~~------~v~~~~-~~~~~~~l~~~~--- 205 (235)
.++|+|+|++|++++. ++.|.+|++. +++.. ..+. +|.. .+..++ |+|||++|++++
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 8999999999887764 7899999875 45532 1221 1222 588999 999999988765
Q ss_pred c-----ceEEeeCC
Q 026679 206 S-----VLSFWIPN 214 (235)
Q Consensus 206 ~-----~i~iw~~~ 214 (235)
+ .+.+|+++
T Consensus 277 ~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 277 KFELQGYIAGFKLR 290 (365)
T ss_dssp STTSCCEEEEEEEC
T ss_pred CCCCCCeEEEEEEC
Confidence 3 79999986
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=3.1e-20 Score=148.57 Aligned_cols=184 Identities=14% Similarity=0.111 Sum_probs=141.8
Q ss_pred eeEEEeecCCCe-eEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecC----CeEEEEeccCCCCCCc
Q 026679 17 VISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEA----GAIKLFDSRSYDKGPF 91 (235)
Q Consensus 17 v~~~~~~~~~~~-l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~v~i~d~~~~~~~~~ 91 (235)
+...+|+|+++. +++.+.++.+.+||+.+++.......+. ..++|+|||+.+++++.+ +.|++||+.+++.
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~--- 187 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL--- 187 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC---
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc---
Confidence 446688888853 3333444455699999887766665554 679999999999988877 7899999987663
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecCCC--cEEEEEcCCCceeeeeccCCCCCcceeeE--------EeCCCcEEEE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN--NIYVLDAYGGEKRCGFSLEPSPNTNTEAT--------FTPDGQYVVS 161 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~~ 161 (235)
..+..+...+..++|+|||+.|+++..++ .|++||+.+++.. . ...+...+..++ |+|||.++++
T Consensus 188 --~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~spdg~~~~~ 262 (582)
T 3o4h_A 188 --RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-D--LELPSKDFSSYRPTAITWLGYLPDGRLAVV 262 (582)
T ss_dssp --EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-E--CCCSCSHHHHHCCSEEEEEEECTTSCEEEE
T ss_pred --eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E--ccCCCcChhhhhhccccceeEcCCCcEEEE
Confidence 24567778899999999999999888888 8999999988766 3 334445577777 9999988899
Q ss_pred eCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-----cceEEeeCCC
Q 026679 162 GSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-----SVLSFWIPNP 215 (235)
Q Consensus 162 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~i~iw~~~~ 215 (235)
++.++.+++|++ ++... .+.+.+.+++|+ +++++++++ ..+.+|+..+
T Consensus 263 ~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 263 ARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred EEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 999999999999 66554 244678999999 999888776 3366666554
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=3.3e-19 Score=134.53 Aligned_cols=199 Identities=13% Similarity=0.115 Sum_probs=134.9
Q ss_pred cccceeEEEeecCCCeeEEEecc----ceEEEEecCc--cee--eeeeeccCCce--EEEcCCCCEEEEEe-cCCeEEEE
Q 026679 13 HKERVISLCMSPVNDSFMSGSLD----HSVRIWDLRV--NAC--QGILRLRGRPT--VAFDQQGLVFAVAM-EAGAIKLF 81 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d----~~i~vwd~~~--~~~--~~~~~~~~~~~--~~~~~~~~~l~~~~-~dg~v~i~ 81 (235)
+......++|+|+|++|++++.+ +.|.+|++.. ++. +.....+.... +++ +++.+++++ .++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 55677889999999999998876 7999998865 433 22333233222 555 888777776 57899999
Q ss_pred eccCCCCC-Ccee-Eeec--------CCCcceeEEEEccCCCeEEEec-CCCcEEEEEcCCCce------e------eee
Q 026679 82 DSRSYDKG-PFDT-FLVG--------GDTAEVCDIKFSNDGKSMLLTT-TNNNIYVLDAYGGEK------R------CGF 138 (235)
Q Consensus 82 d~~~~~~~-~~~~-~~~~--------~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~------~------~~~ 138 (235)
++...... .... .... .+...+.+++|+|+|+++++++ .++.|.+|++..... + ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 99754321 1111 1111 1123457899999999776655 488999999875432 1 122
Q ss_pred ccCCCCCcceeeEEeCCCcEEEEeC-CCCcEEEEEcCCCce--eeee---cCCCcceeEEEeecCCCEEEEcc----cce
Q 026679 139 SLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRNE--VACW---NGNIGVVACLKWAPRRAMFVAAS----SVL 208 (235)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~~--~~~~---~~~~~~v~~~~~~~~~~~l~~~~----~~i 208 (235)
... ....+..++|+|+|+++++++ .++.|.+||+.+++. +..+ ..+...+..++|+|+|++|+++. +.+
T Consensus 206 ~~~-~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 206 KVA-PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp ECC-TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred ecC-CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 222 224468899999999887766 689999999987654 2222 22334568999999999886654 459
Q ss_pred EEeeCC
Q 026679 209 SFWIPN 214 (235)
Q Consensus 209 ~iw~~~ 214 (235)
.+|+++
T Consensus 285 ~v~~~~ 290 (361)
T 3scy_A 285 AIFKVD 290 (361)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 999986
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=8.7e-20 Score=137.97 Aligned_cols=200 Identities=9% Similarity=0.026 Sum_probs=136.8
Q ss_pred eeEEEeecCCCe--eEEEe-------------ccceEEEEecC-cceeeeeeec----c--CCceEEEcCCCCEEEEEec
Q 026679 17 VISLCMSPVNDS--FMSGS-------------LDHSVRIWDLR-VNACQGILRL----R--GRPTVAFDQQGLVFAVAME 74 (235)
Q Consensus 17 v~~~~~~~~~~~--l~s~~-------------~d~~i~vwd~~-~~~~~~~~~~----~--~~~~~~~~~~~~~l~~~~~ 74 (235)
..+++|+|+|++ +++++ .++.+.+|++. .++....+.. + ....++|+|+|++++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 556899999984 55553 68999999997 4554433331 1 2334999999998887764
Q ss_pred -CCeEEEEecc-CCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC-CCcEEEEEcC--CCceee---eec-cCC---
Q 026679 75 -AGAIKLFDSR-SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-NNNIYVLDAY--GGEKRC---GFS-LEP--- 142 (235)
Q Consensus 75 -dg~v~i~d~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~--~~~~~~---~~~-~~~--- 142 (235)
++.|.+||+. +++...........+...+..++|+|+|+++++++. ++.|.+|++. +++... .+. ...
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 6899999998 443211111111123466899999999998887765 7899999865 454321 121 111
Q ss_pred -CCC------cceeeE-EeCCCcEEEEeCCCC------cEEEEEcC-CCceee---eecCCCcceeEEEeec---CCCEE
Q 026679 143 -SPN------TNTEAT-FTPDGQYVVSGSGDG------TLHAWNIN-TRNEVA---CWNGNIGVVACLKWAP---RRAMF 201 (235)
Q Consensus 143 -~~~------~i~~~~-~~~~~~~l~~~~~dg------~i~v~d~~-~~~~~~---~~~~~~~~v~~~~~~~---~~~~l 201 (235)
+.. .+..++ |+|||++|+++..+. .|.+|++. +++... ....+...+..++|+| +|++|
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 111 478899 999999988765432 89999996 565443 2333455678899999 89999
Q ss_pred EEcc---cceEEeeCCCC
Q 026679 202 VAAS---SVLSFWIPNPS 216 (235)
Q Consensus 202 ~~~~---~~i~iw~~~~~ 216 (235)
++++ +.+++|+++..
T Consensus 325 ~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 325 AITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEECSSSCEEEEEEEETT
T ss_pred EEEEcCCCeEEEEEEchh
Confidence 8886 67999998765
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=1.5e-19 Score=137.58 Aligned_cols=208 Identities=12% Similarity=0.070 Sum_probs=149.1
Q ss_pred hhhhhhhhcccccceeE-----EEeecCCCeeEEEec-cc--eEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEE
Q 026679 3 DNRILRYFKGHKERVIS-----LCMSPVNDSFMSGSL-DH--SVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVA 72 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~-----~~~~~~~~~l~s~~~-d~--~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~ 72 (235)
++..+..+..|...... .+|+|||++|+.++. ++ .|.+||+.+++.......+... ...|+|+++.|+.+
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~ 98 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV 98 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEE
T ss_pred CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEE
Confidence 45556667777665555 889999999888887 66 4888899888877776665543 37899999999999
Q ss_pred ecCCeEEEEeccCCCCCCceeEeecCCCcceeEE--EEccCCCeEEEe----------------------cCCCcEEEEE
Q 026679 73 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDI--KFSNDGKSMLLT----------------------TTNNNIYVLD 128 (235)
Q Consensus 73 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~~~----------------------~~d~~i~~~d 128 (235)
..++.+++||+.+++. ......+...+... .++|+++.++.. ..+..|.+||
T Consensus 99 ~~~~~l~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 99 KDGRNLMRVDLATLEE----NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp ETTTEEEEEETTTCCE----EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred eCCCeEEEEECCCCcc----eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 9999999999988664 22233333434333 348899887742 2346799999
Q ss_pred cCCCceeeeeccCCCCCcceeeEEeC-CCcEEEEeCCC------CcEEEEEcCCCceeeeecCCC--cceeEEEeecCCC
Q 026679 129 AYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVVSGSGD------GTLHAWNINTRNEVACWNGNI--GVVACLKWAPRRA 199 (235)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 199 (235)
+.+++...... +...+..+.|+| +|+.|+....+ ..|.++|...++.. .+..+. ..+..+.|+|||+
T Consensus 175 ~~~g~~~~l~~---~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 175 LKTGESTVILQ---ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGS 250 (388)
T ss_dssp TTTCCEEEEEE---ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSS
T ss_pred CCCCceEEeec---CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCC
Confidence 99887654433 234578899999 99998876653 37888887655443 333333 3578899999999
Q ss_pred EEEEcc-----cc--eEEeeCCCCCC
Q 026679 200 MFVAAS-----SV--LSFWIPNPSSN 218 (235)
Q Consensus 200 ~l~~~~-----~~--i~iw~~~~~~~ 218 (235)
.|+..+ .. +.+||+++++.
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 251 ALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp CEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred EEEEEecCCCCCcceEEEEecCCCce
Confidence 886654 12 99999987654
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=4e-20 Score=151.73 Aligned_cols=217 Identities=10% Similarity=0.058 Sum_probs=144.7
Q ss_pred hhhhhhhhcccccc-----eeEEEeecCCCeeEEEecc---------ceEEEEecCcceeeeeeeccC-CceEEEcCCCC
Q 026679 3 DNRILRYFKGHKER-----VISLCMSPVNDSFMSGSLD---------HSVRIWDLRVNACQGILRLRG-RPTVAFDQQGL 67 (235)
Q Consensus 3 ~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~~d---------~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~ 67 (235)
+++....+.+|... ...++|||||++|+.++.+ +.+.+||+.+++......... ....+|+|||+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~ 124 (740)
T 4a5s_A 45 YGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGH 124 (740)
T ss_dssp TCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTT
T ss_pred CCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCC
Confidence 45544555666532 2447889999999998876 566799999988665333222 33499999999
Q ss_pred EEEEEecCCeEEEEeccCCCCCCceeEeecCCCcc-----------------eeEEEEccCCCeEEEecCCC--------
Q 026679 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAE-----------------VCDIKFSNDGKSMLLTTTNN-------- 122 (235)
Q Consensus 68 ~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~-----------------v~~~~~~~~~~~l~~~~~d~-------- 122 (235)
.|+.+ .++.|++|++.+++. ......++... ...+.|+|||+.|+..+.|.
T Consensus 125 ~la~~-~~~~i~~~~~~~~~~---~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~ 200 (740)
T 4a5s_A 125 KLAYV-WNNDIYVKIEPNLPS---YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (740)
T ss_dssp CEEEE-ETTEEEEESSTTSCC---EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred EEEEE-ECCeEEEEECCCCce---EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEE
Confidence 99888 568999999987653 12222222221 23589999999999875321
Q ss_pred ----------------------------cEEEEEcCC---Cce--eeeeccC----CCCCcceeeEEeCCCcEEEEeC--
Q 026679 123 ----------------------------NIYVLDAYG---GEK--RCGFSLE----PSPNTNTEATFTPDGQYVVSGS-- 163 (235)
Q Consensus 123 ----------------------------~i~~~d~~~---~~~--~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~-- 163 (235)
.|++||+.+ ++. ...+... .+...+..++|+|||+.++...
T Consensus 201 ~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r 280 (740)
T 4a5s_A 201 SFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRR 280 (740)
T ss_dssp EECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEES
T ss_pred EeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCC
Confidence 488899888 632 1222211 2456688999999999766543
Q ss_pred --CCCcEEEEEcCCCc----ee--eee--cCCCccee-----EEEeecCCCEEE-Ecc-----cceEEeeCCCCCCCCCC
Q 026679 164 --GDGTLHAWNINTRN----EV--ACW--NGNIGVVA-----CLKWAPRRAMFV-AAS-----SVLSFWIPNPSSNSTDE 222 (235)
Q Consensus 164 --~dg~i~v~d~~~~~----~~--~~~--~~~~~~v~-----~~~~~~~~~~l~-~~~-----~~i~iw~~~~~~~~~~~ 222 (235)
.+..|++||+.+++ +. ..+ ..|...+. .+.|+|||+.++ ..+ ..|.+|+.+++....+.
T Consensus 281 ~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 281 IQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp STTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC
T ss_pred CCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecc
Confidence 33479999999887 22 222 34555444 789999999876 553 44888888876655544
Q ss_pred C
Q 026679 223 S 223 (235)
Q Consensus 223 ~ 223 (235)
.
T Consensus 361 ~ 361 (740)
T 4a5s_A 361 K 361 (740)
T ss_dssp C
T ss_pred c
Confidence 3
No 166
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=1.9e-17 Score=120.97 Aligned_cols=197 Identities=9% Similarity=0.110 Sum_probs=142.9
Q ss_pred cccceeEEEee-cCCCeeEEEec-cceEEEEecCcceeeeeeeccC---CceEEEcCCCCEEEEEecCCeEEEEeccCCC
Q 026679 13 HKERVISLCMS-PVNDSFMSGSL-DHSVRIWDLRVNACQGILRLRG---RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 87 (235)
Q Consensus 13 h~~~v~~~~~~-~~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~ 87 (235)
|...+.++++. +++.++++... ++.|++|| .+++....+.... ...++++|+++++++...++.|.+||.....
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV 153 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE
Confidence 44578899995 66666666543 88999999 5666666554322 2348999999988887788999999964311
Q ss_pred CCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC-
Q 026679 88 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG- 166 (235)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg- 166 (235)
........+...+..++++|+|+.+++...++.|++||. .++.+..+....+...+..++++|+|+++++...++
T Consensus 154 ---~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~ 229 (286)
T 1q7f_A 154 ---LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNF 229 (286)
T ss_dssp ---EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSC
T ss_pred ---EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCE
Confidence 112221234456889999999997777778999999997 455555554433335578999999999888888776
Q ss_pred cEEEEEcCCCceeeeecCCCc--ceeEEEeecCCCEEEEcc-cceEEeeCCC
Q 026679 167 TLHAWNINTRNEVACWNGNIG--VVACLKWAPRRAMFVAAS-SVLSFWIPNP 215 (235)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-~~i~iw~~~~ 215 (235)
.|.+||. +++.+..+..+.. .+.+++++|+|+++++.. +.|++|++..
T Consensus 230 ~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 230 NLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 9999995 6666666654432 477999999998887754 7799998854
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.82 E-value=5.3e-18 Score=127.93 Aligned_cols=206 Identities=13% Similarity=0.111 Sum_probs=137.3
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEe----------ccceEEEEecCcceeeeeeecc-------C-CceEEEc
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGS----------LDHSVRIWDLRVNACQGILRLR-------G-RPTVAFD 63 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~-------~-~~~~~~~ 63 (235)
++++++..+..+..+ .++|+|+++++++++ .++.|.+||..+.+.+..+... . ...++++
T Consensus 39 ~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~s 116 (361)
T 2oiz_A 39 TNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQT 116 (361)
T ss_dssp TTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEEC
T ss_pred CCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEEC
Confidence 355666667666666 899999999998886 3678999999998888877643 1 2239999
Q ss_pred CCCCEEEEEec--CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEc--------------------------------
Q 026679 64 QQGLVFAVAME--AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFS-------------------------------- 109 (235)
Q Consensus 64 ~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~-------------------------------- 109 (235)
|+|++|+++.. ++.|.+||+.+.+. ...+..... ...+.+.
T Consensus 117 pdg~~l~v~n~~~~~~v~v~d~~~~~~----~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~ 191 (361)
T 2oiz_A 117 TDGKFIVLQNASPATSIGIVDVAKGDY----VEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSR 191 (361)
T ss_dssp TTSSEEEEEEESSSEEEEEEETTTTEE----EEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEECCCCCCeEEEEECCCCcE----EEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeecc
Confidence 99999998874 58999999987542 111000000 0011122
Q ss_pred -----------------cCCCeEEEecCCCcEEEEEcCCCcee--eeeccCC--------CCCcceeeEEeCCCcEEEEe
Q 026679 110 -----------------NDGKSMLLTTTNNNIYVLDAYGGEKR--CGFSLEP--------SPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 110 -----------------~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~~~--------~~~~i~~~~~~~~~~~l~~~ 162 (235)
|++..++..+.++.+.++|+...... ..+.... .+.....++|+|+++.++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~ 271 (361)
T 2oiz_A 192 SKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVF 271 (361)
T ss_dssp CCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEE
T ss_pred ccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEE
Confidence 22223333344455666665433211 1111100 00112237899998887765
Q ss_pred CC-----------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCC
Q 026679 163 SG-----------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPS 216 (235)
Q Consensus 163 ~~-----------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~ 216 (235)
.. .+.|.+||+.+++.+..+..+. +.+++|+|+|++|++++ +.+.+||..+.
T Consensus 272 ~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~ 335 (361)
T 2oiz_A 272 MHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQP 335 (361)
T ss_dssp EESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSS
T ss_pred EccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCC
Confidence 32 3479999999999999998776 99999999999998887 78999999877
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=2.3e-18 Score=139.71 Aligned_cols=205 Identities=14% Similarity=0.012 Sum_probs=137.6
Q ss_pred cccceeEEEeecCCCeeEEEecc----------ceEEEEecCc------ceeeeee-eccC-CceEEEcCCCCEEEEEec
Q 026679 13 HKERVISLCMSPVNDSFMSGSLD----------HSVRIWDLRV------NACQGIL-RLRG-RPTVAFDQQGLVFAVAME 74 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d----------~~i~vwd~~~------~~~~~~~-~~~~-~~~~~~~~~~~~l~~~~~ 74 (235)
|...+.+++|+|||+.|++++.| ..|++||+.+ ++..... ..+. ...++|+|||+.|+.++.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 67788999999999999998877 5899999987 5544333 2222 223899999999998875
Q ss_pred C--------CeEEEEecc-CCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCC--cEEEEEcCCCceeeeeccCCC
Q 026679 75 A--------GAIKLFDSR-SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN--NIYVLDAYGGEKRCGFSLEPS 143 (235)
Q Consensus 75 d--------g~v~i~d~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~ 143 (235)
+ ..|.+||+. ++.... .......+...+..+.|+|||+.++++..++ .|++||+.+++.......+..
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~-~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFAD-TRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEE-EEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred CCCCCCCCCcEEEEEEECCCCcccc-cEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence 5 379999998 441101 1222334467889999999999777777777 677777766665443322111
Q ss_pred C------CcceeeEEeCCCcEEEEeCCCCcEEEE--EcCCCceeeeecCCCcceeEE-EeecCCCEEEEcc----cceEE
Q 026679 144 P------NTNTEATFTPDGQYVVSGSGDGTLHAW--NINTRNEVACWNGNIGVVACL-KWAPRRAMFVAAS----SVLSF 210 (235)
Q Consensus 144 ~------~~i~~~~~~~~~~~l~~~~~dg~i~v~--d~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~----~~i~i 210 (235)
. ..+..++|+|+++++++++. +.+++| |+.+++ +..+..+...+..+ +++++..++++++ ..+.+
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred ccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 0 01457899999999999998 998998 554454 56777777777766 4443333333333 23556
Q ss_pred eeCCCCCCCC
Q 026679 211 WIPNPSSNST 220 (235)
Q Consensus 211 w~~~~~~~~~ 220 (235)
+++++++...
T Consensus 365 ~d~~~g~~~~ 374 (662)
T 3azo_A 365 LDTVTGRART 374 (662)
T ss_dssp EETTTCCEEE
T ss_pred EECCCCceEE
Confidence 6665655433
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=7.8e-18 Score=125.53 Aligned_cols=198 Identities=11% Similarity=0.054 Sum_probs=144.9
Q ss_pred cccceeEEEeecCCCeeEEEeccceEEEEecCcce-eeeeeec---------c--CCceEEEcC-CCCEEEEEe-cCCeE
Q 026679 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-CQGILRL---------R--GRPTVAFDQ-QGLVFAVAM-EAGAI 78 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-~~~~~~~---------~--~~~~~~~~~-~~~~l~~~~-~dg~v 78 (235)
+-.....++++|+|+++++...++.|++||..... .+..+.. + ....++++| ++.++++.+ .++.|
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 44577899999999988888889999999975442 3444321 1 112399999 788888876 68999
Q ss_pred EEEeccCCCCCCceeEeec----------CCCcceeEEEEccC-CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcc
Q 026679 79 KLFDSRSYDKGPFDTFLVG----------GDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTN 147 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i 147 (235)
++||... .. ...+. .+......++++|+ +..+++...++.|++||..+++.+..+........+
T Consensus 169 ~~~~~~g-~~----~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 169 VQFSPSG-KF----VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp EEECTTS-CE----EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred EEEcCCC-CE----EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 9999432 21 22221 12234789999998 777777778899999999888888777655555668
Q ss_pred eeeEEeCCCcEEEE-------eCCCCcEEEEEcCCCceeeeec---CCCcceeEEEeecCCCEEEEcc--cceEEeeCCC
Q 026679 148 TEATFTPDGQYVVS-------GSGDGTLHAWNINTRNEVACWN---GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 148 ~~~~~~~~~~~l~~-------~~~dg~i~v~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~ 215 (235)
..++|+| +..+.+ ...+..|++||..+++.+..+. .+...+.+++++|+|.++++.. +.|++|+++.
T Consensus 244 ~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 244 FAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred ceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 8899999 433333 3345689999999999888873 5666789999999997666665 6699998865
Q ss_pred C
Q 026679 216 S 216 (235)
Q Consensus 216 ~ 216 (235)
.
T Consensus 323 ~ 323 (329)
T 3fvz_A 323 K 323 (329)
T ss_dssp C
T ss_pred c
Confidence 3
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=8.2e-18 Score=123.52 Aligned_cols=208 Identities=13% Similarity=0.125 Sum_probs=144.5
Q ss_pred hhhhhhcccccceeEEEeecCCC-eeEEEeccceEEEEecCcceeeeeeeccCC--ceEEEcCCCCEEEEEecCCeEEEE
Q 026679 5 RILRYFKGHKERVISLCMSPVND-SFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 5 ~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
..+..+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+.. ..++++++++++++...++.|.+|
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 33445556667788999999998 7888888999999999877 444444433 338999999988777777899999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEE----ec-------------CCCcEEEEEcCCCceeeeeccCCCC
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL----TT-------------TNNNIYVLDAYGGEKRCGFSLEPSP 144 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~~~d~~~~~~~~~~~~~~~~ 144 (235)
|..+++...............+..++++|+|+.+++ ++ ..+.|..++.. ++... +. ...
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~--~~~ 171 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSA-PI--RDR 171 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEE-EE--CCC
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEE-ee--cCC
Confidence 987655311100000011234678999999997776 33 13467777655 44332 22 223
Q ss_pred CcceeeEEeCCCcEEEEeCCCCcEEEEEcC-CCce---eeeecCCCcceeEEEeecCCCEEEEcccceEEeeCCCCCC
Q 026679 145 NTNTEATFTPDGQYVVSGSGDGTLHAWNIN-TRNE---VACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSN 218 (235)
Q Consensus 145 ~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~~ 218 (235)
.....++|+|+++.|++.+.++.|++|++. +++. ...+..+...+.+++++++|+++++..+.|.+|+.++...
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDGDEL 249 (296)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECTTSCEE
T ss_pred CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECCCCCEE
Confidence 446889999999999778888999999986 4544 2233334556789999999998887777899999875443
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=1.3e-18 Score=132.28 Aligned_cols=211 Identities=9% Similarity=0.025 Sum_probs=143.2
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce----EEEcCCCCEEEEEe-----
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT----VAFDQQGLVFAVAM----- 73 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~----- 73 (235)
+++..+...+|...+..+.|+|+|+.|+.++.++.|++||+.+++....+..+.... ..++|+++.++...
T Consensus 69 ~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~ 148 (388)
T 3pe7_A 69 TQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRRED 148 (388)
T ss_dssp TCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred CCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcc
Confidence 445555555666666678899999999999999999999999988777666555432 34589999887532
Q ss_pred -----------------cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEcc-CCCeEEEecCC------CcEEEEEc
Q 026679 74 -----------------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTN------NNIYVLDA 129 (235)
Q Consensus 74 -----------------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~~d~ 129 (235)
.+..|.+||+.+++. ..+..+...+..++|+| ||+.|+....+ ..|.++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~-----~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~ 223 (388)
T 3pe7_A 149 WVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-----TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINE 223 (388)
T ss_dssp CCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-----EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEET
T ss_pred cccccccchhhhhhccCCcceEEEEECCCCce-----EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeC
Confidence 346799999987652 23334556788999999 99988877653 37888888
Q ss_pred CCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC-C----CcEEEEEcCCCcee--eeecCCCc---ceeEEEeecCCC
Q 026679 130 YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-D----GTLHAWNINTRNEV--ACWNGNIG---VVACLKWAPRRA 199 (235)
Q Consensus 130 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d----g~i~v~d~~~~~~~--~~~~~~~~---~v~~~~~~~~~~ 199 (235)
..++.... ........+....|+|||+.|+..+. + ..|++||+.+++.. ..+.++.. ....+.|+|||+
T Consensus 224 ~~~~~~~l-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 224 DGTNMRKV-KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp TSCCCEES-CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred CCCceEEe-eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCC
Confidence 76554332 22221134778899999998765433 1 23999999988743 23332111 122347999999
Q ss_pred EEEEc---------c--cceEEeeCCCCCCC
Q 026679 200 MFVAA---------S--SVLSFWIPNPSSNS 219 (235)
Q Consensus 200 ~l~~~---------~--~~i~iw~~~~~~~~ 219 (235)
.|+.. . ..|++|+++++...
T Consensus 303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (388)
T 3pe7_A 303 DAPVDVQDDSGYKIENDPFLYVFNMKNGTQH 333 (388)
T ss_dssp CC------------CCCCEEEEEETTTTEEE
T ss_pred cceeEeeeccccccCCCCEEEEEeccCCceE
Confidence 88753 2 57999999876543
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=7.9e-17 Score=117.65 Aligned_cols=199 Identities=10% Similarity=0.132 Sum_probs=144.5
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeecc--------CCceEEE-cCCCCEEEEEec-CCeEEEE
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR--------GRPTVAF-DQQGLVFAVAME-AGAIKLF 81 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--------~~~~~~~-~~~~~~l~~~~~-dg~v~i~ 81 (235)
+|-....+++++++++++++...++.|.+||.+ ++....+... ....+++ .+++.++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999988888889999999986 5555554321 1223788 467776666644 8899999
Q ss_pred eccCCCCCCceeEee-cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEE
Q 026679 82 DSRSYDKGPFDTFLV-GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV 160 (235)
Q Consensus 82 d~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 160 (235)
|.. ++. ...+ ..+...+..++++|+|+.+++...++.|.+||. .++....+....+...+..++++|+|++++
T Consensus 106 d~~-g~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 106 NQY-GQF----VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp CTT-SCE----EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred CCC-CcE----EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 943 321 2222 223456889999999987777777899999996 455555544333334578999999999888
Q ss_pred EeCCCCcEEEEEcCCCceeeeecCC--CcceeEEEeecCCCEEEEcc--c-ceEEeeCCCCCC
Q 026679 161 SGSGDGTLHAWNINTRNEVACWNGN--IGVVACLKWAPRRAMFVAAS--S-VLSFWIPNPSSN 218 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~--~-~i~iw~~~~~~~ 218 (235)
+...++.|++||. +++.+..+..+ ...+..++++|+|+++++.. + .|.+|+.+....
T Consensus 180 ~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~ 241 (286)
T 1q7f_A 180 SDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLI 241 (286)
T ss_dssp EEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEE
T ss_pred EECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEE
Confidence 8888999999997 56666666433 35789999999999888875 4 799999765433
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=6.6e-18 Score=137.02 Aligned_cols=204 Identities=12% Similarity=0.060 Sum_probs=140.1
Q ss_pred hhhhcccccceeEEEeecCCCeeEEE--eccceEEEEecCcceeeeeeeccCC--c---------eEEEc--CCCCE-EE
Q 026679 7 LRYFKGHKERVISLCMSPVNDSFMSG--SLDHSVRIWDLRVNACQGILRLRGR--P---------TVAFD--QQGLV-FA 70 (235)
Q Consensus 7 ~~~~~~h~~~v~~~~~~~~~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~~~--~---------~~~~~--~~~~~-l~ 70 (235)
...+.+|...+..++|++++-.+++. +.++...||....+.....+..+.. . ...|+ |||+. |+
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 45677899999999999876566666 5578899998644433444433322 2 34455 99998 77
Q ss_pred EEec-CCeEEEEecc--C-CCCCCceeEeecC-----CCcceeEEEEccCCCeEEEecCC----------CcEEEEEcCC
Q 026679 71 VAME-AGAIKLFDSR--S-YDKGPFDTFLVGG-----DTAEVCDIKFSNDGKSMLLTTTN----------NNIYVLDAYG 131 (235)
Q Consensus 71 ~~~~-dg~v~i~d~~--~-~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~ 131 (235)
.+.. +..|.++++. . +.. ..+.. +...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~-----~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVP-----RPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCC-----EECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EEECCCCeEEEEcCCCCCCCCC-----EeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 6654 5566666665 2 221 22223 55678899999999999988876 5899999987
Q ss_pred ------CceeeeeccCCCCCcceeeEEeCCCcEEEEeCCC--------CcEEEEEcC-CC---ceeeeecCCCcceeEEE
Q 026679 132 ------GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD--------GTLHAWNIN-TR---NEVACWNGNIGVVACLK 193 (235)
Q Consensus 132 ------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~v~d~~-~~---~~~~~~~~~~~~v~~~~ 193 (235)
++... +. ..+...+..++|+|||++|+.++.+ ..|++||+. ++ +.......+...+..+.
T Consensus 171 ~~~~~~~~~~~-l~-~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~ 248 (662)
T 3azo_A 171 SAAADRSAVRE-LS-DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAE 248 (662)
T ss_dssp TTTTCGGGSEE-SS-CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEE
T ss_pred CccccCCceeE-EE-ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceE
Confidence 55432 22 0233567889999999999877644 379999998 56 44444445567899999
Q ss_pred eecCCCEEEEcc--c--ceEEeeCCCCC
Q 026679 194 WAPRRAMFVAAS--S--VLSFWIPNPSS 217 (235)
Q Consensus 194 ~~~~~~~l~~~~--~--~i~iw~~~~~~ 217 (235)
|+|||+++++++ + .+.+|+.+++.
T Consensus 249 ~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 249 WAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred ECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 999999777665 4 45566654544
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=1.1e-18 Score=132.94 Aligned_cols=209 Identities=9% Similarity=0.007 Sum_probs=141.1
Q ss_pred hhhhhhhhcccccc-----eeEEEeecCCCeeEEEecc---ceEEEEecCcceeeeeeeccCC-c-eEEEcCCCCEEEEE
Q 026679 3 DNRILRYFKGHKER-----VISLCMSPVNDSFMSGSLD---HSVRIWDLRVNACQGILRLRGR-P-TVAFDQQGLVFAVA 72 (235)
Q Consensus 3 ~~~~~~~~~~h~~~-----v~~~~~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~ 72 (235)
+++.+..+..+... +.+++|+|+|++|+..... ..|.+||+.+++.......... . .+.|+|+++.|+.+
T Consensus 19 ~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~ 98 (396)
T 3c5m_A 19 TQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYV 98 (396)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEE
T ss_pred CCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEE
Confidence 44445555554333 7889999999998776543 4688899988876555443332 2 27899999999999
Q ss_pred ecCCeEEEEeccCCCCCCceeEeecCCCcceeE-------------------EEEccCCCeEEEe-----cCCCcEEEEE
Q 026679 73 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCD-------------------IKFSNDGKSMLLT-----TTNNNIYVLD 128 (235)
Q Consensus 73 ~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~~~d 128 (235)
+.++.+.+||+.+++. ......+...... +.|+|+++.++.. ..+..|++||
T Consensus 99 ~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d 174 (396)
T 3c5m_A 99 KNELNLMKVDLETLEE----QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVD 174 (396)
T ss_dssp ETTTEEEEEETTTCCE----EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEE
T ss_pred EcCCcEEEEECCCCCc----EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEE
Confidence 9999999999987653 1112212221111 3567888777654 3567899999
Q ss_pred cCCCceeeeeccCCCCCcceeeEEeC-CCcEEEEeCCC------CcEEEEEcCCCceeeeecCC-CcceeEEEeecCCCE
Q 026679 129 AYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVVSGSGD------GTLHAWNINTRNEVACWNGN-IGVVACLKWAPRRAM 200 (235)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~ 200 (235)
+.+++...... +...+..+.|+| +++.|+..+.+ ..|.+||+..++........ ...+..+.|+|+|++
T Consensus 175 ~~~g~~~~~~~---~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~ 251 (396)
T 3c5m_A 175 IETGELEVIHQ---DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSA 251 (396)
T ss_dssp TTTCCEEEEEE---ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSC
T ss_pred CCCCcEEeecc---CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCE
Confidence 98887655442 234578899999 78877665443 46889998665543333321 236888999999998
Q ss_pred EEEcc-----cc--eEEeeCCCCCC
Q 026679 201 FVAAS-----SV--LSFWIPNPSSN 218 (235)
Q Consensus 201 l~~~~-----~~--i~iw~~~~~~~ 218 (235)
|+.++ .. +++|++.++..
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCCE
T ss_pred EEEEecCCCCccceEEEEECCCCCe
Confidence 77764 23 99999876643
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=8.4e-17 Score=119.93 Aligned_cols=202 Identities=12% Similarity=0.109 Sum_probs=146.3
Q ss_pred ccceeEEEeecCCCeeEEEecc------------------------ceEEEEecCcceeeeeeeccC---CceEEEcCCC
Q 026679 14 KERVISLCMSPVNDSFMSGSLD------------------------HSVRIWDLRVNACQGILRLRG---RPTVAFDQQG 66 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d------------------------~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~ 66 (235)
-+.+.+++++|+|+++++.+.+ ++|.+||..+++....+.... ...++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999988888777 479999998888776554322 2239999999
Q ss_pred CEEEEEecCCeEEEEeccCCCCCCceeEee-------cCCCcceeEEEEcc-CCCeEEEec-CCCcEEEEEcCCCceeee
Q 026679 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLV-------GGDTAEVCDIKFSN-DGKSMLLTT-TNNNIYVLDAYGGEKRCG 137 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~~~d~~~~~~~~~ 137 (235)
+++++...++.|++||...... ....... ..+......++++| ++..+++.+ .++.|++|| .+++....
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ 180 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence 9888888899999999765321 1111111 23344688999999 788777775 689999999 56666555
Q ss_pred eccCC--------CCCcceeeEEeCC-CcEEEEeCCCCcEEEEEcCCCceeeeec--CCCcceeEEEeecCCCEEEEcc-
Q 026679 138 FSLEP--------SPNTNTEATFTPD-GQYVVSGSGDGTLHAWNINTRNEVACWN--GNIGVVACLKWAPRRAMFVAAS- 205 (235)
Q Consensus 138 ~~~~~--------~~~~i~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~- 205 (235)
+.... .......++++|+ ++++++...++.|++||..+++.+..+. .+...+..++|+| +..+.+.+
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 43221 1133788999998 7888888889999999998888887774 4556788999999 33333322
Q ss_pred --------cceEEeeCCCCCC
Q 026679 206 --------SVLSFWIPNPSSN 218 (235)
Q Consensus 206 --------~~i~iw~~~~~~~ 218 (235)
..+++|++.....
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCE
T ss_pred EEeccCCCcEEEEEEcCCCeE
Confidence 3688999766543
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=1.6e-16 Score=116.63 Aligned_cols=201 Identities=10% Similarity=0.014 Sum_probs=142.0
Q ss_pred hhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeecc------CCceEEEcCCCCEEEEEec------
Q 026679 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR------GRPTVAFDQQGLVFAVAME------ 74 (235)
Q Consensus 7 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~------ 74 (235)
.+.+..+...+.+++++|+|+++++...++.|.+||..+++........ ....++++|+|+++++...
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 3445566778899999999998887777789999999777654443221 1234899999998887321
Q ss_pred -----------CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcC-CCce---eeeec
Q 026679 75 -----------AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY-GGEK---RCGFS 139 (235)
Q Consensus 75 -----------dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-~~~~---~~~~~ 139 (235)
.+.|..++.. +. ......+......++|+|+++.+++.+.++.|.+|++. +++. ...+
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~-----~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~- 213 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-GT-----LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF- 213 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-SC-----EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-
T ss_pred cccccccccCCCcEEEEECCC-CC-----EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-
Confidence 2355555543 22 22233445667899999999988777778999999987 4544 2233
Q ss_pred cCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEe-ecCCCEEEEcc-cceEEeeCCCCC
Q 026679 140 LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKW-APRRAMFVAAS-SVLSFWIPNPSS 217 (235)
Q Consensus 140 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~-~~i~iw~~~~~~ 217 (235)
......+..++++++|+++++. ++.|.+||.. ++.+..+..+.. +.+++| .|++..|.+++ +.+.-+++++..
T Consensus 214 -~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 214 -TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp -CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred -eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 2234556789999999977666 7889999985 777777877766 999999 58888777776 555555665554
Q ss_pred CC
Q 026679 218 NS 219 (235)
Q Consensus 218 ~~ 219 (235)
++
T Consensus 289 ~~ 290 (296)
T 3e5z_A 289 LE 290 (296)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.78 E-value=1.5e-16 Score=130.16 Aligned_cols=202 Identities=10% Similarity=0.020 Sum_probs=139.1
Q ss_pred ccccceeEEEeecCCCeeEEEeccc-----eEEEEecCcceeeeeee-ccCCceEEEcCCCCEEEEEecCCe--------
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDH-----SVRIWDLRVNACQGILR-LRGRPTVAFDQQGLVFAVAMEAGA-------- 77 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~dg~-------- 77 (235)
+|...+..++|||||++|+.++.++ .|++||+.+++...... ......++|+|||+.|+.+..++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 3555788999999999988776544 89999999998765432 223445999999999999987765
Q ss_pred --------EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC-----CCcEEEEEcCC------Cc-eeee
Q 026679 78 --------IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-----NNNIYVLDAYG------GE-KRCG 137 (235)
Q Consensus 78 --------v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~------~~-~~~~ 137 (235)
|++|++.+.............+...+..+.|+|||++|+..+. +..|++||+.+ +. ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 9999997755322222233334556788999999999988765 56899999976 42 2333
Q ss_pred eccCCCCCcceeeEEeCCCcEEEEeCC----CCcEEEEEcCCCce--eeeecCCCc--ceeEEEeecCCCEEEEcc--c-
Q 026679 138 FSLEPSPNTNTEATFTPDGQYVVSGSG----DGTLHAWNINTRNE--VACWNGNIG--VVACLKWAPRRAMFVAAS--S- 206 (235)
Q Consensus 138 ~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~~~--~~~~~~~~~--~v~~~~~~~~~~~l~~~~--~- 206 (235)
+..+. ..+. ..|+|+|+.|+..+. .+.|.+||+.++.. ...+..|.. .+..+.|++++.++++.. +
T Consensus 282 l~~~~--~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~ 358 (710)
T 2xdw_A 282 LIDNF--EGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVK 358 (710)
T ss_dssp EECSS--SSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTE
T ss_pred eeCCC--CcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCE
Confidence 33222 2233 358899888776554 33699999987642 234444433 688899997777777765 3
Q ss_pred -ceEEeeCCCC
Q 026679 207 -VLSFWIPNPS 216 (235)
Q Consensus 207 -~i~iw~~~~~ 216 (235)
.+.+|++..+
T Consensus 359 ~~l~~~~~~~g 369 (710)
T 2xdw_A 359 NTLQLHDLATG 369 (710)
T ss_dssp EEEEEEETTTC
T ss_pred EEEEEEECCCC
Confidence 3677777433
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=1.1e-17 Score=127.39 Aligned_cols=196 Identities=12% Similarity=0.018 Sum_probs=132.9
Q ss_pred eeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce---------------------EEEcCCCCEEEEE---
Q 026679 17 VISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT---------------------VAFDQQGLVFAVA--- 72 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~--- 72 (235)
...+.|+|+|+.|+.++.++.|++||+.+++.......+.... ..++|+++.++..
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 83 TFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred cccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 3347899999999999999999999998887665555333211 1346666655544
Q ss_pred --ecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEcc-CCCeEEEecCC------CcEEEEEcCCCceeeeeccCCC
Q 026679 73 --MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTN------NNIYVLDAYGGEKRCGFSLEPS 143 (235)
Q Consensus 73 --~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~ 143 (235)
..+..|.+||+.+++. ..+..+...+..+.|+| +++.|+..+.+ ..|.+||+..++...... ...
T Consensus 163 ~~~~~~~l~~~d~~~g~~-----~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~ 236 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGEL-----EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAE 236 (396)
T ss_dssp HTCCCEEEEEEETTTCCE-----EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCT
T ss_pred cCCCcceEEEEECCCCcE-----EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCC
Confidence 3566899999887553 12223556788999999 78877766543 468999987665433222 211
Q ss_pred CCcceeeEEeCCCcEEEEeCCC-----CcEEEEEcCCCceeeeecCCCcceeEEEeec-CCCEEEEcc------------
Q 026679 144 PNTNTEATFTPDGQYVVSGSGD-----GTLHAWNINTRNEVACWNGNIGVVACLKWAP-RRAMFVAAS------------ 205 (235)
Q Consensus 144 ~~~i~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~------------ 205 (235)
...+..++|+|+|++|+.++.+ +.|++||+.+++........ . .. +.|+| +|++++.++
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-P-CS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-S-EE-EEEECSSSSEEEEEECCC---------
T ss_pred CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-C-CC-CCccCCCCceEEEecCCcceeeccccc
Confidence 2347788999999988776443 44999999887654332211 2 23 89999 999888642
Q ss_pred ------cceEEeeCCCCCCCCC
Q 026679 206 ------SVLSFWIPNPSSNSTD 221 (235)
Q Consensus 206 ------~~i~iw~~~~~~~~~~ 221 (235)
..+.+|+++++....+
T Consensus 314 ~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp -CCCCCCEEEEEETTTTBCCEE
T ss_pred cccCCCCcEEEEecccCceEEc
Confidence 5699999877655433
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.77 E-value=2e-16 Score=119.28 Aligned_cols=180 Identities=9% Similarity=0.058 Sum_probs=121.6
Q ss_pred cceeEEEeecCCCeeEEEec--cceEEEEecCcceeeee-eeccCCceEEEcCCC-CEEEEEecCCeEEEEeccC-----
Q 026679 15 ERVISLCMSPVNDSFMSGSL--DHSVRIWDLRVNACQGI-LRLRGRPTVAFDQQG-LVFAVAMEAGAIKLFDSRS----- 85 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~-~~l~~~~~dg~v~i~d~~~----- 85 (235)
.....++++|+|++|+++.. +++|.+||+.+++.+.. +.......+.+.|++ ..+++.+.||.+.+|+...
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~ 187 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVA 187 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEe
Confidence 34567899999999998864 58999999999987776 543322113334432 3344444444444444322
Q ss_pred -------------------------------------------CCCCCceeEeecC--------CCcceeEEEEccCCCe
Q 026679 86 -------------------------------------------YDKGPFDTFLVGG--------DTAEVCDIKFSNDGKS 114 (235)
Q Consensus 86 -------------------------------------------~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~ 114 (235)
............. .......++++|+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ 267 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGR 267 (361)
T ss_dssp EEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTE
T ss_pred eeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCe
Confidence 1100000000000 0011112788999888
Q ss_pred EEEecC-----------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCC--ceeee
Q 026679 115 MLLTTT-----------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR--NEVAC 181 (235)
Q Consensus 115 l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--~~~~~ 181 (235)
++++.. .+.|.+||+.+++.+..+.... +..++|+|+|++|++++. +.|.+||..++ +.+..
T Consensus 268 lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~----p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 268 MYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD----ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp EEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT----CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred EEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC----eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 777643 3479999999999888776553 788999999999998887 99999999999 88888
Q ss_pred ecCCCcceeEEEeecCCC
Q 026679 182 WNGNIGVVACLKWAPRRA 199 (235)
Q Consensus 182 ~~~~~~~v~~~~~~~~~~ 199 (235)
+..+......++++|+|.
T Consensus 343 i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 343 IEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ETTSCSSEEEEEECCCSC
T ss_pred eccCCCCcEEEEecCCCC
Confidence 766777889999999985
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=2.6e-16 Score=117.19 Aligned_cols=207 Identities=10% Similarity=0.038 Sum_probs=144.8
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC------Cce-EEEcCCCCEEEEEe--
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG------RPT-VAFDQQGLVFAVAM-- 73 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------~~~-~~~~~~~~~l~~~~-- 73 (235)
+++.+.++.. ......++++++++.+++...++.|.+||..+++....+.... .+. +++ . +..++++.
T Consensus 73 t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~ 149 (328)
T 3dsm_A 73 TFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWS 149 (328)
T ss_dssp TCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECT
T ss_pred ccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCC
Confidence 4555566643 3567889999988544444478999999999998887776544 333 666 3 44455544
Q ss_pred cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCC----------CcEEEEEcCCCceeeeeccCCC
Q 026679 74 EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN----------NNIYVLDAYGGEKRCGFSLEPS 143 (235)
Q Consensus 74 ~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~~~~~~~~~~~~~ 143 (235)
.++.|.++|+.+.+. ...... ......++++|+|+.++++..+ +.|.++|..+++....+.....
T Consensus 150 ~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g 224 (328)
T 3dsm_A 150 YQNRILKIDTETDKV----VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG 224 (328)
T ss_dssp TCCEEEEEETTTTEE----EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT
T ss_pred CCCEEEEEECCCCeE----EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC
Confidence 488999999987653 222221 2345678899999876666554 7899999999887766655322
Q ss_pred CCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeee--ecCCCcceeEEEeec-CCCEEEEc----c--cceEEeeCC
Q 026679 144 PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC--WNGNIGVVACLKWAP-RRAMFVAA----S--SVLSFWIPN 214 (235)
Q Consensus 144 ~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~----~--~~i~iw~~~ 214 (235)
.....++|+|+++.|+++.. .|.+||..+++.... +.........++++| ++.++++. . +.|.+|+.+
T Consensus 225 -~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 225 -DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -CCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred -CCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 24788999999999888765 899999988776422 222245788999999 66666665 3 779999988
Q ss_pred CCCCCC
Q 026679 215 PSSNST 220 (235)
Q Consensus 215 ~~~~~~ 220 (235)
...+..
T Consensus 302 g~~~~~ 307 (328)
T 3dsm_A 302 GKLIDE 307 (328)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 443333
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.75 E-value=1.1e-16 Score=120.36 Aligned_cols=172 Identities=12% Similarity=0.072 Sum_probs=131.5
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcce-----------eeeeeeccCCceEEEcCCCCEEEEEecCCeEEEEecc
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-----------CQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
+++.+++++...++++|+.++ +++|+++..+ ............++| +++.|+++ .++.|++||++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 689999999999999999985 6679876443 112333334444888 89999999 88999999998
Q ss_pred CCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC
Q 026679 85 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 164 (235)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 164 (235)
+... ......+...+.++.+.+. .+++++.||.|.+||+.+++... ....|++++|+|+| ++.|..
T Consensus 115 sl~~----~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~------~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 115 ELSE----FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ------LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp STTC----EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE------EEESEEEEEECSSE--EEEEET
T ss_pred hhhc----cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc------ccCCceEEEEcCCc--eEEEEc
Confidence 8663 2233445567887777654 38889999999999999877643 12359999999999 678889
Q ss_pred CCcEEEEEcCCCce--eeee------c---CCCcceeEEEeecCCCEEEEcc
Q 026679 165 DGTLHAWNINTRNE--VACW------N---GNIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 165 dg~i~v~d~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~~~ 205 (235)
||.+++|+...++. ..++ . +|...|.++.|.+++.++++-.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99999999877664 4455 2 3678999999999999998753
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.75 E-value=1.9e-16 Score=129.17 Aligned_cols=198 Identities=8% Similarity=0.022 Sum_probs=132.8
Q ss_pred ccccceeEEEeecCCCeeE-----EEeccceEEEEecCcceeeeeeeccCC--ceEEEcCCCCEEEEEecCCe-------
Q 026679 12 GHKERVISLCMSPVNDSFM-----SGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLVFAVAMEAGA------- 77 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~-----s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~dg~------- 77 (235)
+|...+.+++|||||++|| .|+.+..|++||+.+++.......... ..++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 4666789999999999988 444456899999999876511122222 45999999999999988765
Q ss_pred ------EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCC----cEEEEEcCCCceeeeeccCCCCCcc
Q 026679 78 ------IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN----NIYVLDAYGGEKRCGFSLEPSPNTN 147 (235)
Q Consensus 78 ------v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~~~~~~~i 147 (235)
|++|++.+.............+...+..+.|+|||++|+..+.++ .|++++..+++... +..+. ..+
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~--~~~ 274 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL-LVKGV--GAK 274 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE-EEECS--SCC
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE-eecCC--Cce
Confidence 999999876532223333344556788999999999998887666 67777765554433 22222 234
Q ss_pred eeeEEeCCCcEEEEeC---CCCcEEEEEcCCCce---eeeecCC-CcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 148 TEATFTPDGQYVVSGS---GDGTLHAWNINTRNE---VACWNGN-IGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 148 ~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~~---~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
....+ ++|++++... .++.|.+||+.+++. ...+..+ ...+..++|+ ++.++++.. +..++|.++
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 55555 5666444444 257899999977653 2333333 4568888888 566666665 555666443
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=1.3e-15 Score=110.60 Aligned_cols=182 Identities=12% Similarity=0.090 Sum_probs=141.7
Q ss_pred CCeeEEEeccceEEEEecCcceeeeeeeccC---CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCC-Cc
Q 026679 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRG---RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TA 101 (235)
Q Consensus 26 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~-~~ 101 (235)
++.|++++.|+.|.+||.++++.+..+..+. ...+.+.|+|++++ +.++.|..||. +++. ...+... ..
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~----~W~~~~~~~~ 77 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRE----LWNIAAPAGC 77 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCE----EEEEECCTTC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCE----EEEEcCCCCc
Confidence 6789999999999999999999999988764 45589999999888 45778999998 5443 3333332 34
Q ss_pred ceeEEEEccCCCeEEEecC-CCcEEEEEcCCCceeeeeccCCC----CCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCC
Q 026679 102 EVCDIKFSNDGKSMLLTTT-NNNIYVLDAYGGEKRCGFSLEPS----PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176 (235)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 176 (235)
.+.++.+.|+|+.+++.+. ++.|..+|. +++.+..+..... ......+++.++|+++++...++.|..||.. |
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 6788999999999998877 788888885 6777666654321 1234557889999999999999999999987 9
Q ss_pred ceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 177 NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 177 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
+.+.++... ..+.++...+++.+++++. +.+..+|.++++
T Consensus 156 ~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 156 QLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp CEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred CEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 998888754 4566788899999998876 458888887443
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=3e-15 Score=111.59 Aligned_cols=202 Identities=8% Similarity=0.055 Sum_probs=139.4
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC--CceEEEcCCCCEEEEEecC----CeEEEEe
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVFAVAMEA----GAIKLFD 82 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d----g~v~i~d 82 (235)
.+..+...+.+++|+|++++++++..++.|.+||.++++......... ...++++|+++++++...+ +.|.+||
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 445566677899999999988888889999999998877655443222 3348999999988877666 6899999
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG 156 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 156 (235)
..+..... ..........+..++++|+|+.+++... .+.|..+|..+++...... ....+..++|+|++
T Consensus 119 ~~~~~~~~--~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 119 ENGDNLQD--IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ---NISVANGIALSTDE 193 (333)
T ss_dssp TTSCSCEE--EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE---EESSEEEEEECTTS
T ss_pred CCCCEEEE--EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec---CCCcccceEECCCC
Confidence 87755310 1111123456889999999987766543 3567777766554433221 11236789999999
Q ss_pred cEEE-EeCCCCcEEEEEcCC-Cceeee--------ecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 157 QYVV-SGSGDGTLHAWNINT-RNEVAC--------WNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 157 ~~l~-~~~~dg~i~v~d~~~-~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
+.|+ +.+.++.|.+||+.+ +..+.. +.++ ..+..++++++|+++++.. +.|.+|+.+..
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSC
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCC
Confidence 8664 445678999999863 333221 1222 4678899999999887763 67999998654
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.74 E-value=3.7e-15 Score=107.78 Aligned_cols=195 Identities=12% Similarity=0.082 Sum_probs=137.0
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeecc---CCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCc
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR---GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
..+.+++++++++++++.. ++.|.+||....... .+... ....++++++++++++...++.|.+|+..+...
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~--- 141 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--- 141 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC---
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee---
Confidence 5678899999988666655 889999998655432 22211 123489999999887777788999997654332
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~ 171 (235)
..........+..++++++|+.+++...++.|.+||........... .....+..++++++|.++++...++.|.+|
T Consensus 142 -~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~ 218 (270)
T 1rwi_B 142 -TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF--TDITAPWGIAVDEAGTVYVTEHNTNQVVKL 218 (270)
T ss_dssp -EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC--SSCCSEEEEEECTTCCEEEEETTTSCEEEE
T ss_pred -EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc--cCCCCceEEEECCCCCEEEEECCCCcEEEE
Confidence 11122223457889999999877776778899999987665433211 222457889999999888888788899999
Q ss_pred EcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 172 NINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 172 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
|............+...+.+++++|+|+++++.. +.|+++++...+
T Consensus 219 ~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 219 LAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred cCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 9865543332223335689999999998777765 678998876543
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=7.7e-15 Score=109.26 Aligned_cols=196 Identities=9% Similarity=0.026 Sum_probs=140.3
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeE
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF 94 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~ 94 (235)
....+.+. +++.+++...++.|.+||..+++.+..+.....+. ++++++++.+++...++.|.+||..+.+.. ...
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~--~~i 121 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT--GYI 121 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE--EEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE--EEE
Confidence 45677775 34556666678999999999999888886444333 888898855444448899999999876531 112
Q ss_pred eecC---CCcceeEEEEccCCCeEEEec--CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCC----
Q 026679 95 LVGG---DTAEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD---- 165 (235)
Q Consensus 95 ~~~~---~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---- 165 (235)
.... .......+++ . +..++++. .++.|.++|+.+++....+.... ....++++|+|++++++..+
T Consensus 122 ~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp ECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTC
T ss_pred EcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEECCCccCC
Confidence 2211 0114456677 3 44455554 48899999999998877766533 25678999999988777665
Q ss_pred ------CcEEEEEcCCCceeeeecCC-CcceeEEEeecCCCEEEEcccceEEeeCCCCCCC
Q 026679 166 ------GTLHAWNINTRNEVACWNGN-IGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNS 219 (235)
Q Consensus 166 ------g~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~~~ 219 (235)
+.|.++|..+++....+... ...+..++|+|+++.+.++.+.+.+||.++.+..
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRVP 257 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESSSEEEEETTCSSCC
T ss_pred ccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEccEEEEEECCCCcee
Confidence 78999999988877666532 2368999999999998888778999998776653
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=6.6e-16 Score=115.15 Aligned_cols=194 Identities=13% Similarity=0.120 Sum_probs=136.2
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC--CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCc
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
+..|.++.|++++..++..+.++.++.| .++....+..+. ...++|++++++++++..++.|.+||..+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~--- 78 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI--- 78 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE---
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE---
Confidence 3568889999988888877888999999 334444444333 23489999999888888899999999877543
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecCC----CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC---
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTN----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG--- 164 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--- 164 (235)
......+...+.+++++|+|+.+++...+ +.|.+||..++.....+........+..++++|+|+++++...
T Consensus 79 -~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 79 -KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS 157 (333)
T ss_dssp -EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT
T ss_pred -EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccc
Confidence 22222345679999999999877776665 6899999887765433322223346889999999998877654
Q ss_pred ---CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCC
Q 026679 165 ---DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 215 (235)
Q Consensus 165 ---dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~ 215 (235)
.+.|..+|..+++... +......+..++|+|+++.++.+. +.|.+|+++.
T Consensus 158 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp TBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 3557777765544432 222334578999999998665443 6799999853
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=3.1e-15 Score=122.39 Aligned_cols=198 Identities=9% Similarity=0.032 Sum_probs=139.6
Q ss_pred ceeEEEeecCCCeeEEEeccce----------------EEEEecCcceee--eeeecc--CC--ceEEEcCCCCEEEEEe
Q 026679 16 RVISLCMSPVNDSFMSGSLDHS----------------VRIWDLRVNACQ--GILRLR--GR--PTVAFDQQGLVFAVAM 73 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~----------------i~vwd~~~~~~~--~~~~~~--~~--~~~~~~~~~~~l~~~~ 73 (235)
.+..++|+|||+.|+.++.++. |++|++.+++.. ..+... .. ..+.|+|+|++|+..+
T Consensus 172 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 172 KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 3678999999999998888766 999999877632 222322 22 2489999999988877
Q ss_pred c-----CCeEEEEeccC------CCCCCceeEeecCCCcceeEEEEccCCCeEEEecCC----CcEEEEEcCCCce--ee
Q 026679 74 E-----AGAIKLFDSRS------YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN----NNIYVLDAYGGEK--RC 136 (235)
Q Consensus 74 ~-----dg~v~i~d~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~--~~ 136 (235)
. +..+.+||+.+ +.. . ...+..+...+.. .|+|+|+.|+..+.. ..|.+||+.+++. ..
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~-~--~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 327 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGIL-K--WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK 327 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSC-C--CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE
T ss_pred EccCCCccEEEEEECcccccccCCcc-c--eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce
Confidence 5 56899999976 321 1 2223334444443 488999988876653 3699999987642 22
Q ss_pred eeccCCCCCcceeeEEeCCCcEEEEeCCCCc--EEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEc--c----cce
Q 026679 137 GFSLEPSPNTNTEATFTPDGQYVVSGSGDGT--LHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAA--S----SVL 208 (235)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~----~~i 208 (235)
.+..+.....+..++|++++.++++...++. |++||+.+++.+..+..+.+.+..+.++|++..++.. + +.+
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp EEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEE
T ss_pred eccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEE
Confidence 2332322235778899988888888888874 6677876788777787777889999999998766533 2 569
Q ss_pred EEeeCCCCC
Q 026679 209 SFWIPNPSS 217 (235)
Q Consensus 209 ~iw~~~~~~ 217 (235)
..||+.+++
T Consensus 408 ~~~d~~tg~ 416 (710)
T 2xdw_A 408 YHCDLTKEE 416 (710)
T ss_dssp EEEETTSSS
T ss_pred EEEECCCCc
Confidence 999987765
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.72 E-value=2.9e-15 Score=108.75 Aligned_cols=194 Identities=12% Similarity=0.069 Sum_probs=148.4
Q ss_pred chhhhhhhhcccc-cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC---CceEEEcCCCCEEEEEec-CC
Q 026679 2 YDNRILRYFKGHK-ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG---RPTVAFDQQGLVFAVAME-AG 76 (235)
Q Consensus 2 ~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~-dg 76 (235)
++|+.+.++..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+. ...+.+.++|+++++.+. ++
T Consensus 23 ~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~ 99 (276)
T 3no2_A 23 DTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS 99 (276)
T ss_dssp TTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTE
T ss_pred CCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCC
Confidence 4778888888776 5789999999999888 35778999998 888888887653 223788999999999887 77
Q ss_pred eEEEEeccCCCCCCceeEeec----CCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEE
Q 026679 77 AIKLFDSRSYDKGPFDTFLVG----GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATF 152 (235)
Q Consensus 77 ~v~i~d~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 152 (235)
.+..+|.. ++. .....+. .+......+++.++|+++++...++.|..||.. ++.+..+.... .+..+..
T Consensus 100 ~v~~vd~~-Gk~--l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~---~~~~~~~ 172 (276)
T 3no2_A 100 TILEVNMK-GEV--LSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSG---TPFSSAF 172 (276)
T ss_dssp EEEEECTT-SCE--EEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSS---CCCEEEE
T ss_pred EEEEEeCC-CCE--EEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCC---CccceeE
Confidence 78777753 221 1222221 122345566788999999999999999999987 88887776543 3556788
Q ss_pred eCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCC------cceeEEEeecCCCEEEEcc
Q 026679 153 TPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI------GVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 153 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~ 205 (235)
.++|+.++++..++.|..+|..+++.+.++..+. ..+..+...++|.++++..
T Consensus 173 ~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 173 LDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred cCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8999999999988899999999899988875332 2378888899999988874
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=8e-16 Score=115.27 Aligned_cols=181 Identities=10% Similarity=0.119 Sum_probs=123.2
Q ss_pred cceeEEEeecCCCeeEEEeccc-----eEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecC--------------
Q 026679 15 ERVISLCMSPVNDSFMSGSLDH-----SVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEA-------------- 75 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------------- 75 (235)
..+..++|+|||++|+.++.++ .|.+||+.+++.......+....++|+|+++.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~ 138 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVP 138 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CC
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccc
Confidence 4577899999999998877542 488888888876665554444448999999998888642
Q ss_pred -------------CeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCC---------cEEEEEcCCCc
Q 026679 76 -------------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN---------NIYVLDAYGGE 133 (235)
Q Consensus 76 -------------g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------~i~~~d~~~~~ 133 (235)
..|.+||+.+++. ...+.. . .+..++|+|+| .++++..++ .|.++| +++
T Consensus 139 ~~~~g~~~~~~~~~~l~~~d~~~~~~----~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~ 209 (347)
T 2gop_A 139 AWFDDLGFFDGEKTTFWIFDTESEEV----IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK 209 (347)
T ss_dssp CC---------CEEEEEEEETTTTEE----EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE
T ss_pred eeecCcccccCccceEEEEECCCCeE----EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCc
Confidence 5788899876542 112222 2 67889999999 777665432 355555 554
Q ss_pred eeeeeccCCCCCcceeeEEeCCCcEEEEeCCC--------CcEEEEEcCCCceeeeecCCCcceeE-EEeecCCCEEEEc
Q 026679 134 KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD--------GTLHAWNINTRNEVACWNGNIGVVAC-LKWAPRRAMFVAA 204 (235)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~v~d~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~ 204 (235)
...... . ..+.. ++|+|++|+.++.+ ..|++|| +++.......+...+.. +.|+ ++ +++++
T Consensus 210 ~~~l~~-~---~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~ 279 (347)
T 2gop_A 210 EEKMFE-K---VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTL 279 (347)
T ss_dssp EEEEEE-E---ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEE
T ss_pred eEEecc-C---cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEE
Confidence 433222 2 23433 39999988876643 3688888 56655555566678886 9999 88 77666
Q ss_pred c--cceEEeeCCC
Q 026679 205 S--SVLSFWIPNP 215 (235)
Q Consensus 205 ~--~~i~iw~~~~ 215 (235)
+ +..++| ++.
T Consensus 280 ~~~~~~~l~-~~~ 291 (347)
T 2gop_A 280 FEEGSVNLY-IWD 291 (347)
T ss_dssp EETTEEEEE-EES
T ss_pred ecCCcEEEE-EcC
Confidence 5 778999 763
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=1.7e-14 Score=104.29 Aligned_cols=196 Identities=11% Similarity=0.079 Sum_probs=134.5
Q ss_pred ceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeec--cCCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCce
Q 026679 16 RVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRL--RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFD 92 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~ 92 (235)
...+++++++|++++ +...++.|.+||..+......... .....++++++++++++.. ++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~---- 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ---- 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC----
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE----
Confidence 678899999998776 546788999999765543222111 1233499999999666655 88999999876432
Q ss_pred eEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEE
Q 026679 93 TFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172 (235)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d 172 (235)
..........+..++++|+|+.+++...++.|.+|+..+...... .......+..++++|+|+++++...++.|.+||
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL--PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC--CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee--ccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 111112235688999999998777777788999997655433221 122223578899999999777777788999999
Q ss_pred cCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 173 INTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
............+...+.+++++++|.++++.. +.|.+|+.++...
T Consensus 178 ~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 178 AESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp TTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred cCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 876655443333336788999999997777764 6799999876543
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=4.3e-15 Score=111.25 Aligned_cols=179 Identities=8% Similarity=0.045 Sum_probs=120.1
Q ss_pred eeEEEeecCCCeeEEEec---------------------------cceEEEEecCcceeeeeeeccCCceEEEcCCCCEE
Q 026679 17 VISLCMSPVNDSFMSGSL---------------------------DHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVF 69 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~---------------------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l 69 (235)
+..++|+|+|+.|+.++. ...|.+||+.+++.+..+.......++|+|++ ++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~ 184 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IV 184 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EE
Confidence 899999999998888764 25799999988876333333344559999999 77
Q ss_pred EEEecCC-------eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCC--------CcEEEEEcCCCce
Q 026679 70 AVAMEAG-------AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN--------NNIYVLDAYGGEK 134 (235)
Q Consensus 70 ~~~~~dg-------~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~~~ 134 (235)
+++..++ ...+|.+.+++ ...+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +++.
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d~~~-----~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~ 254 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWEDGK-----EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV 254 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEETTE-----EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE
T ss_pred EEEecccccccccccccEEEeCCCc-----eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCce
Confidence 7776542 44555554222 1122222 344443 9999998887754 3688888 5544
Q ss_pred eeeeccCCCCCccee-eEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cc-eEE
Q 026679 135 RCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SV-LSF 210 (235)
Q Consensus 135 ~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~-i~i 210 (235)
.... ..+...+.. +.|+ ++ ++++++.++.+++| +.+++... +..+...|.+++|+| .++++++ +. ..+
T Consensus 255 ~~l~--~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l 326 (347)
T 2gop_A 255 MGIL--DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLREL 326 (347)
T ss_dssp EESS--TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEE
T ss_pred Eecc--ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHh
Confidence 3322 233456775 8999 88 88899999999999 87665543 334577899999999 5555554 33 377
Q ss_pred eeCC
Q 026679 211 WIPN 214 (235)
Q Consensus 211 w~~~ 214 (235)
|.++
T Consensus 327 ~~~~ 330 (347)
T 2gop_A 327 FTWD 330 (347)
T ss_dssp EEES
T ss_pred eEeC
Confidence 7766
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.69 E-value=2.3e-14 Score=113.60 Aligned_cols=211 Identities=10% Similarity=0.074 Sum_probs=146.4
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecC--cceeeeeeeccCCce-EEEc----CCCCEEEEEec-
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR--VNACQGILRLRGRPT-VAFD----QQGLVFAVAME- 74 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~~-~~~~----~~~~~l~~~~~- 74 (235)
+++.+..+... ..+..+.|+|||+++++++.|+.|.+||+. +++.+..+.....+. ++++ |+|++++++..
T Consensus 186 t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 186 TYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp TCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred CCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEcc
Confidence 45555555533 346689999999999999999999999995 777777777655444 8999 69998887765
Q ss_pred CCeEEEEeccCCCCCCceeEeec--------------------C---------------------------------CCc
Q 026679 75 AGAIKLFDSRSYDKGPFDTFLVG--------------------G---------------------------------DTA 101 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~~~~~~--------------------~---------------------------------~~~ 101 (235)
++.+.++|..+.+... ..... . ...
T Consensus 265 ~~~v~ViD~~t~~~~~--~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~ 342 (567)
T 1qks_A 265 PPQYVIMDGETLEPKK--IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAER 342 (567)
T ss_dssp TTEEEEEETTTCCEEE--EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCS
T ss_pred CCeEEEEECCCCcEEE--EEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccc
Confidence 5899999976644211 11100 0 011
Q ss_pred ceeEEEEccCCCeEEEec-CCCcEEEEEcCCCceeeeecc-CCCCCcceeeE-EeCCCcEE-EEeC-CCCcEEEEEcCC-
Q 026679 102 EVCDIKFSNDGKSMLLTT-TNNNIYVLDAYGGEKRCGFSL-EPSPNTNTEAT-FTPDGQYV-VSGS-GDGTLHAWNINT- 175 (235)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~~~l-~~~~-~dg~i~v~d~~~- 175 (235)
....+.|+|++++++++. .++.|.++|+.+++....... ...+.+-.... ++|++..+ +++. .++.|.++|..+
T Consensus 343 ~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 343 FLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp SEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred cccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 233568999999887665 578899999999988776655 22222112233 58874444 4543 468999999987
Q ss_pred ------CceeeeecCCCcceeEEEeecCCCEEEEcc---------cceEEeeCCCC
Q 026679 176 ------RNEVACWNGNIGVVACLKWAPRRAMFVAAS---------SVLSFWIPNPS 216 (235)
Q Consensus 176 ------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~~i~iw~~~~~ 216 (235)
.+.+.++......-..+..+|+++++.+.. +.|.++|+++.
T Consensus 423 ~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 423 GHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 566777765544445678999999888754 37999998765
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=1.6e-14 Score=118.69 Aligned_cols=196 Identities=9% Similarity=-0.028 Sum_probs=127.5
Q ss_pred cccceeEEEeecCCCeeEEEecc-----ceEEEEecCcceeeeeeecc-CCceEEEcCCCCEEEEEecCCe---------
Q 026679 13 HKERVISLCMSPVNDSFMSGSLD-----HSVRIWDLRVNACQGILRLR-GRPTVAFDQQGLVFAVAMEAGA--------- 77 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~dg~--------- 77 (235)
|...+..++|||||++|+.++.+ ..|++||+.+++.+...... ....++|+|| +.|+.+..++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 44478899999999998877654 46999999998875532111 1245899999 98888876554
Q ss_pred -----EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCC-----cEEEEEcCCC--ceeeeeccCCCCC
Q 026679 78 -----IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN-----NIYVLDAYGG--EKRCGFSLEPSPN 145 (235)
Q Consensus 78 -----v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~~~~~~ 145 (235)
|++|++.+.............+...+..+.|+|||++|+..+.++ .|++||+.++ +....+.... .
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~ 317 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL--K 317 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS--S
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC--C
Confidence 888998765432222232233334588999999999988877543 8999999876 3122332222 2
Q ss_pred cceeeEEeCCCcEEEEeCC----CCcEEEEEcCCC--ceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeC
Q 026679 146 TNTEATFTPDGQYVVSGSG----DGTLHAWNINTR--NEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~----dg~i~v~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
..... ++|+|+.|+..+. ++.|.+||+.++ +....+..+...+..+.|+ ++.++++.. +..+||.+
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 23333 4588888877655 345999999874 3334444455567778887 455555554 45555544
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.66 E-value=9.1e-14 Score=110.23 Aligned_cols=189 Identities=11% Similarity=-0.030 Sum_probs=140.5
Q ss_pred cCCCeeEEEeccceEEEEecCcceeeeeeeccCC-ceEEEcCCCCEEEEEecCCeEEEEecc--CCCCCCceeEeecCCC
Q 026679 24 PVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR-PTVAFDQQGLVFAVAMEAGAIKLFDSR--SYDKGPFDTFLVGGDT 100 (235)
Q Consensus 24 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~dg~v~i~d~~--~~~~~~~~~~~~~~~~ 100 (235)
|.+..+++...+++|.++|..+++.+..+..... ..+.++|+++++++++.++.|.+||+. +.+. ...... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~----v~~i~~-G 239 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT----VAEIKI-G 239 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE----EEEEEC-C
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE----eEEEec-C
Confidence 4445677778899999999999999888876544 359999999999999999999999996 4332 222222 2
Q ss_pred cceeEEEEc----cCCCeEEEecC-CCcEEEEEcCCCceeeeeccCC--------C-CCcceeeEEeCCCcE-EEEeCCC
Q 026679 101 AEVCDIKFS----NDGKSMLLTTT-NNNIYVLDAYGGEKRCGFSLEP--------S-PNTNTEATFTPDGQY-VVSGSGD 165 (235)
Q Consensus 101 ~~v~~~~~~----~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~--------~-~~~i~~~~~~~~~~~-l~~~~~d 165 (235)
.....++|+ |||++++++.. ++.+.++|..+.+.+..+.... + ...+..+..++++.. ++....+
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~ 319 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKET 319 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCC
Confidence 346789999 69998887765 6899999999998887765432 1 124677888887554 4556678
Q ss_pred CcEEEEEcCCCceee--eecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCCC
Q 026679 166 GTLHAWNINTRNEVA--CWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 166 g~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~ 218 (235)
|.|.++|..+.+.+. .+. .......+.|+|++++++++. +.|.++|.++.++
T Consensus 320 g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl 376 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKL 376 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred CeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcE
Confidence 999999987654322 222 234567889999999988775 6799999987654
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.65 E-value=2.7e-13 Score=102.50 Aligned_cols=211 Identities=10% Similarity=-0.019 Sum_probs=132.3
Q ss_pred hhhhhhhhcccccceeEEEeecCCCeeEEEe----------ccceEEEEecCcceeeeeeecc---------CCceEEEc
Q 026679 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGS----------LDHSVRIWDLRVNACQGILRLR---------GRPTVAFD 63 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~---------~~~~~~~~ 63 (235)
+++.+..+.....+ .++++|||++++.+. .++.|.+||..+.+.+..+... ....++++
T Consensus 56 t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~s 133 (373)
T 2mad_H 56 SGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANT 133 (373)
T ss_pred CCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEEC
Confidence 45555555543344 899999999988875 3678999999988887776543 12248999
Q ss_pred CCCCEEEEEec--CCeEEEEeccCCCCCCcee-EeecCC----------------Cc---------ce------------
Q 026679 64 QQGLVFAVAME--AGAIKLFDSRSYDKGPFDT-FLVGGD----------------TA---------EV------------ 103 (235)
Q Consensus 64 ~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~-~~~~~~----------------~~---------~v------------ 103 (235)
|+|++|+++.. ++.|.++| .+++... . ...... .+ .+
T Consensus 134 pDG~~l~v~n~~~~~~v~viD-~t~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 134 PNNADLLFFQFAAGPAVGLVV-QGGSSDD--QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTA 210 (373)
T ss_pred CCCCEEEEEecCCCCeEEEEE-CCCCEEe--EEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccC
Confidence 99999998874 57899999 7765311 1 111000 00 00
Q ss_pred -----eEEEEccCCCeEEEecCCCcEEEEEcCCCce--eeeeccCC--------CCCcceeeEEeCCCcEEEEeCC----
Q 026679 104 -----CDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK--RCGFSLEP--------SPNTNTEATFTPDGQYVVSGSG---- 164 (235)
Q Consensus 104 -----~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~---- 164 (235)
....+.+++..++..+..+.+.+.|+..... ...+.... .+.....+.++|+++.++++..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 0011222222223233445566666544321 11111100 0122334788999888877543
Q ss_pred ------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCC-EEEEcc---cceEEeeCCCCCCC
Q 026679 165 ------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFVAAS---SVLSFWIPNPSSNS 219 (235)
Q Consensus 165 ------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~---~~i~iw~~~~~~~~ 219 (235)
.+.|.++|..+++.+..+.. .....+++|+|||+ .++++. +.+.+||..+.+..
T Consensus 291 ~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred ccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 35799999999999888863 34689999999999 666654 77999999876654
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=1.6e-14 Score=117.97 Aligned_cols=195 Identities=10% Similarity=0.028 Sum_probs=130.5
Q ss_pred eEEEeecCCCeeEEEeccce-------------EEEEecCcceee--eeeec--cCC--ceEEEcCCCCEEEEEecCC--
Q 026679 18 ISLCMSPVNDSFMSGSLDHS-------------VRIWDLRVNACQ--GILRL--RGR--PTVAFDQQGLVFAVAMEAG-- 76 (235)
Q Consensus 18 ~~~~~~~~~~~l~s~~~d~~-------------i~vwd~~~~~~~--~~~~~--~~~--~~~~~~~~~~~l~~~~~dg-- 76 (235)
..++|+|||+.|+.++.|.. |++|++.++... ..+.. +.. ..+.|+|+|++|+.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 68899999999999988776 999999887632 23332 212 2388999999988887665
Q ss_pred --eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC----CCcEEEEEcCCCce--eeeeccCCCCCcce
Q 026679 77 --AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT----NNNIYVLDAYGGEK--RCGFSLEPSPNTNT 148 (235)
Q Consensus 77 --~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~~--~~~~~~~~~~~~i~ 148 (235)
.+.+++..+... ..+..+...+....+ ++|. ++..+. ++.|.+||+.+++. ...+..+.....+.
T Consensus 251 ~~~l~~~~~~~~~~-----~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~ 323 (695)
T 2bkl_A 251 ENDVYWKRPGEKDF-----RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLL 323 (695)
T ss_dssp EEEEEEECTTCSSC-----EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE
T ss_pred ceEEEEEcCCCCce-----EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEE
Confidence 566665443321 222233344555556 6676 555443 57899999987653 12222222234577
Q ss_pred eeEEeCCCcEEEEeCCCCcEEEEEcC-CCceeeeecCC-CcceeEEEeecCCCEEEEcc------cceEEeeCCCCCCCC
Q 026679 149 EATFTPDGQYVVSGSGDGTLHAWNIN-TRNEVACWNGN-IGVVACLKWAPRRAMFVAAS------SVLSFWIPNPSSNST 220 (235)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~------~~i~iw~~~~~~~~~ 220 (235)
.++|+ ++.++++...|+..++|.+. +++....+..+ .+.+..++++|++..++... +.+++||+.+++...
T Consensus 324 ~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~ 402 (695)
T 2bkl_A 324 SVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSEL 402 (695)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred EEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 78888 67788888889988877664 45555556544 56788899999987766332 569999998765433
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=8.6e-13 Score=96.52 Aligned_cols=196 Identities=8% Similarity=0.066 Sum_probs=140.2
Q ss_pred hcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeee-eccC--CceEEEcCCCCEEEEEecCCeEEEEeccCC
Q 026679 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL-RLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSY 86 (235)
Q Consensus 10 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~ 86 (235)
+..+...+.++++.++|+.+++...++.|.+||.. ++..... .... ...+++++++.++++...++.|..||...
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g- 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG- 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC-
Confidence 34456789999999999877776667899999987 5433222 1111 23388999999888877788999999752
Q ss_pred CCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC
Q 026679 87 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 166 (235)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (235)
. ............+..+++.++++.+++...++.|..||. +++... +........+..++++++|+++++...++
T Consensus 88 ~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 162 (299)
T 2z2n_A 88 I---IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSFITLGSDNALWFTENQNN 162 (299)
T ss_dssp C---EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred c---EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCceEEEcCCCCEEEEeCCCC
Confidence 2 122222234457889999999987777777889999998 554432 22232334578999999998888887788
Q ss_pred cEEEEEcCCCceeee-ecCCCcceeEEEeecCCCEEEEcc--cceEEeeC
Q 026679 167 TLHAWNINTRNEVAC-WNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 167 ~i~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
.|..||. +++.... .......+.++++++++.++++.. +.+.+|+.
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC
Confidence 9999998 6665432 233445688999999998777764 67888988
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=3e-13 Score=99.80 Aligned_cols=195 Identities=11% Similarity=0.098 Sum_probs=132.8
Q ss_pred cccceeEEEeecC-CCeeEEEeccceEEEEecCcceeeee-eec------cCCceEEEcCCCCEEEEEecC---------
Q 026679 13 HKERVISLCMSPV-NDSFMSGSLDHSVRIWDLRVNACQGI-LRL------RGRPTVAFDQQGLVFAVAMEA--------- 75 (235)
Q Consensus 13 h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~-~~~------~~~~~~~~~~~~~~l~~~~~d--------- 75 (235)
+...+.+++++++ ++++++.. .+.|.+||.+ ++.... ... .....++++++++++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 4567889999998 66555444 4478999987 655433 221 123459999999888777655
Q ss_pred ------CeEEEEeccCCCCCCceeEeecCCCcceeEEEEc----cCCCeEEEe-cCCCcEEEEEcC-CCceee--e-ecc
Q 026679 76 ------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFS----NDGKSMLLT-TTNNNIYVLDAY-GGEKRC--G-FSL 140 (235)
Q Consensus 76 ------g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~i~~~d~~-~~~~~~--~-~~~ 140 (235)
+.+..+|.. ++. .....+......++++ |+++.++.+ ..++.|.+||+. +++... . ...
T Consensus 147 ~~~~~~~~l~~~~~~-g~~-----~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 220 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQM-----IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI 220 (314)
T ss_dssp TTSSSCEEEEEECTT-SCE-----EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC
T ss_pred cccCCCCeEEEECCC-CCE-----EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC
Confidence 567777654 221 1111222346788999 999766555 567899999986 443211 1 122
Q ss_pred CCCC-CcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCC
Q 026679 141 EPSP-NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 215 (235)
Q Consensus 141 ~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~ 215 (235)
..+. ..+..++++++|+++++...++.|.+||..+++.+..+..+...+.+++|+|+++.|..++ +.+..|+++.
T Consensus 221 ~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 2222 4578899999999888877788999999987887777766667899999999999555443 4788888764
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.64 E-value=7.8e-13 Score=101.28 Aligned_cols=199 Identities=9% Similarity=-0.012 Sum_probs=135.8
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCC--eEEEEeccCCCCCCce
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAG--AIKLFDSRSYDKGPFD 92 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~~~~ 92 (235)
.....|+|+++++++++...++.|++||..++.............++|+++++.|+++..++ .|..++...... ..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~--~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWEGTHTVYVYMKASGWA--PT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSSTTCEEEEEEGGGTTC--EE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecCCCceEEEEEcCCCce--eE
Confidence 46789999999987777777899999999887766655544433499999999999988766 788888766442 11
Q ss_pred eE-ee-cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeec--cCCCCCcc-e-eeEEeCC-CcEEEEeCCC
Q 026679 93 TF-LV-GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS--LEPSPNTN-T-EATFTPD-GQYVVSGSGD 165 (235)
Q Consensus 93 ~~-~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~~~~~~~i-~-~~~~~~~-~~~l~~~~~d 165 (235)
.. .. ......+.+++++|++..|+++..++.|+.||..++....... ........ . .++|+|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 11 11 1134567889999955556667778899999998765432200 11111112 2 8999994 6666777778
Q ss_pred CcEEEEEcCCCceeeeecCCC---------------cceeEEEeecCCCEEEEcc---cceEEeeCCCCC
Q 026679 166 GTLHAWNINTRNEVACWNGNI---------------GVVACLKWAPRRAMFVAAS---SVLSFWIPNPSS 217 (235)
Q Consensus 166 g~i~v~d~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~ 217 (235)
+.|+.|+... + +..+.++. .....++++|+|.++++-. +.|+.|++..+.
T Consensus 289 ~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 289 SSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp TEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred CEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 8999999753 3 22332221 3478999999998776654 458888865443
No 201
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.63 E-value=8.2e-14 Score=113.64 Aligned_cols=200 Identities=9% Similarity=-0.005 Sum_probs=132.4
Q ss_pred ccccceeEEEeecCCCeeEE-----EeccceEEEEecCcceeeeee-eccCCceEEEcCCCCEEEEEecCC---------
Q 026679 12 GHKERVISLCMSPVNDSFMS-----GSLDHSVRIWDLRVNACQGIL-RLRGRPTVAFDQQGLVFAVAMEAG--------- 76 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s-----~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~dg--------- 76 (235)
+|...+..++|||||++||- |+....|++||+.+++.+... .......++|+ |++.|+.+..+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 45567889999999998884 333467999999999865432 22113458899 999999888774
Q ss_pred ----eEEEEeccCCCCCCceeEeecC-CCcceeEEEEccCCCeEEEecC----CCcEEEEEcCCCc-eeeeeccCCCCCc
Q 026679 77 ----AIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTTT----NNNIYVLDAYGGE-KRCGFSLEPSPNT 146 (235)
Q Consensus 77 ----~v~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~-~~~~~~~~~~~~~ 146 (235)
.|++|++.+............. +......+.|+|||++|+.... ...|+++|+.++. ....+.... ..
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~--~~ 282 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL--DA 282 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS--SS
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC--Cc
Confidence 3899998775432223333333 3445778999999998865443 3589999997763 222333222 22
Q ss_pred ceeeEEeCCCcEEE-EeCCC---CcEEEEEcCCCce--eeeecCCCcceeEEEeecCCCEEEEcc-----cceEEeeCCC
Q 026679 147 NTEATFTPDGQYVV-SGSGD---GTLHAWNINTRNE--VACWNGNIGVVACLKWAPRRAMFVAAS-----SVLSFWIPNP 215 (235)
Q Consensus 147 i~~~~~~~~~~~l~-~~~~d---g~i~v~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~i~iw~~~~ 215 (235)
.... ++++|..|+ ....+ +.|..+|+.++.. ...+..|...+. .|++++..|+... ..+++|++++
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 3333 666666554 44433 6799999987654 234555555554 8999999888775 2588998876
Q ss_pred CC
Q 026679 216 SS 217 (235)
Q Consensus 216 ~~ 217 (235)
..
T Consensus 360 ~~ 361 (693)
T 3iuj_A 360 KR 361 (693)
T ss_dssp CE
T ss_pred Ce
Confidence 54
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.62 E-value=8.2e-13 Score=96.96 Aligned_cols=186 Identities=10% Similarity=0.063 Sum_probs=125.8
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC------CceEEEcCCCCEEEEEecC---------CeE
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG------RPTVAFDQQGLVFAVAMEA---------GAI 78 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~d---------g~v 78 (235)
...+.+++++++|+++++ . ++.|.+||.++++......... ...++++|+|+++++.... ..-
T Consensus 53 ~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 467889999999985554 3 5679999998876544433221 1238899999976655332 233
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEE-ecCCCcEEEEEc--CCCceee--e-eccCCCCCcceeeEE
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL-TTTNNNIYVLDA--YGGEKRC--G-FSLEPSPNTNTEATF 152 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~--~~~~~~~--~-~~~~~~~~~i~~~~~ 152 (235)
.+|.+..... .............++|+|+++.|+. .+.++.|..||+ .++.... . .........+..+++
T Consensus 131 ~l~~~d~~g~----~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~ 206 (297)
T 3g4e_A 131 ALYSLFPDHH----VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI 206 (297)
T ss_dssp EEEEECTTSC----EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE
T ss_pred EEEEEECCCC----EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE
Confidence 4555443221 1112222345678999999987654 455789999997 4554321 1 122222345788999
Q ss_pred eCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEee-cCCCEEEEcc
Q 026679 153 TPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA-PRRAMFVAAS 205 (235)
Q Consensus 153 ~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 205 (235)
+++|++.++....+.|.+||..+++.+..+..+...+++++|. |+++.|..++
T Consensus 207 d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 207 DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp BTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 9999888887778889999998899988888777789999998 8877665543
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=2.8e-12 Score=93.81 Aligned_cols=195 Identities=9% Similarity=0.027 Sum_probs=136.2
Q ss_pred cccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec-c--CCceEEEcCCCCEEEEEecCCeEEEEeccCCCCC
Q 026679 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL-R--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG 89 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 89 (235)
....+.++++.+++.++++...++.|.+||. +++....... . ....+++++++.++++...++.|..||. +++.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~- 173 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI- 173 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE-
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE-
Confidence 3456889999999988887777889999998 5544322211 1 1234889999988887777889999998 4332
Q ss_pred CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEE
Q 026679 90 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLH 169 (235)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 169 (235)
...........+..+++.++++.+++...++.|..||. +++.. .+........+..++++++|+++++...++.|.
T Consensus 174 --~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 249 (299)
T 2z2n_A 174 --TEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAGIDLWFTEWGANKIG 249 (299)
T ss_dssp --EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEE
T ss_pred --EEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCCCCEEEeccCCceEE
Confidence 12223334456789999999987666666889999998 66543 333333345688999999999777776788999
Q ss_pred EEEcCCCceeee-ecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCC
Q 026679 170 AWNINTRNEVAC-WNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPS 216 (235)
Q Consensus 170 v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~ 216 (235)
.||. +++.... +..+...+.++++ +++.++++.. +.+..++.+..
T Consensus 250 ~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 250 RLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp EEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred EECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 9998 4543221 2344567899999 9998888764 66777777654
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.60 E-value=1.5e-13 Score=104.86 Aligned_cols=213 Identities=12% Similarity=0.042 Sum_probs=140.2
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEe----------ccceEEEEecCcceeeeeeecc--------C-CceEEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGS----------LDHSVRIWDLRVNACQGILRLR--------G-RPTVAF 62 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~--------~-~~~~~~ 62 (235)
.+++.+.++..-..+ .+.++||+++++.+. .++.|.++|..+++.+..+... . ...+++
T Consensus 107 ~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~ 184 (426)
T 3c75_H 107 STGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL 184 (426)
T ss_dssp TTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE
T ss_pred CCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE
Confidence 355666666644455 899999999888775 4678999999999988887653 1 223899
Q ss_pred cCCCCEEEEEec--CCeEEEEeccCCCCCCceeEeecCC--------------------------Cccee----------
Q 026679 63 DQQGLVFAVAME--AGAIKLFDSRSYDKGPFDTFLVGGD--------------------------TAEVC---------- 104 (235)
Q Consensus 63 ~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~~--------------------------~~~v~---------- 104 (235)
+|+|++++++.. ++.|.++|+.+.+... .....+. ...+.
T Consensus 185 spDGk~lyV~n~~~~~~VsVID~~t~kvv~--~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~ 262 (426)
T 3c75_H 185 TPDNKNLLFYQFSPAPAVGVVDLEGKTFDR--MLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE 262 (426)
T ss_dssp CTTSSEEEEEECSSSCEEEEEETTTTEEEE--EEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred cCCCCEEEEEecCCCCeEEEEECCCCeEEE--EEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence 999999999874 5789999998765311 1111000 00000
Q ss_pred ------EEEEccCCCeEEEecCCCcEEEEEcCCCcee--eeeccCC--------CCCcceeeEEeCCCcEEEEeCC----
Q 026679 105 ------DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR--CGFSLEP--------SPNTNTEATFTPDGQYVVSGSG---- 164 (235)
Q Consensus 105 ------~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~---- 164 (235)
.+.+.+++..++.....+.+.+.|+...... ..+.... .+.....++++|+++.+++...
T Consensus 263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 1123445555555555666777776544321 1111100 0111233789999887776532
Q ss_pred ------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCC-EEEEcc---cceEEeeCCCCCCC
Q 026679 165 ------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFVAAS---SVLSFWIPNPSSNS 219 (235)
Q Consensus 165 ------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~---~~i~iw~~~~~~~~ 219 (235)
++.|.++|..+.+.+..+... ....++.|+||++ +++++. +.+.++|..+.+..
T Consensus 343 gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 343 WKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred ccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEE
Confidence 357999999999999888633 3589999999998 777665 77999999877654
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.58 E-value=1.3e-12 Score=96.36 Aligned_cols=197 Identities=11% Similarity=0.093 Sum_probs=128.3
Q ss_pred ccceeEEEeecCCCeeEE-------EeccceEEEEecCcceeeeeee-----c-cCCceEEEcCC-CCEEEEEecCCeEE
Q 026679 14 KERVISLCMSPVNDSFMS-------GSLDHSVRIWDLRVNACQGILR-----L-RGRPTVAFDQQ-GLVFAVAMEAGAIK 79 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s-------~~~d~~i~vwd~~~~~~~~~~~-----~-~~~~~~~~~~~-~~~l~~~~~dg~v~ 79 (235)
-....+++|++++.++++ ...++.|.+||..+++...... . .....++++++ ++++++ +..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCEE
Confidence 345678999999987777 5778899999987776543322 1 22234889998 655544 4445788
Q ss_pred EEeccCCCCCCc-eeEeecCCCcceeEEEEccCCCeEEEecCC---------------CcEEEEEcCCCceeeeeccCCC
Q 026679 80 LFDSRSYDKGPF-DTFLVGGDTAEVCDIKFSNDGKSMLLTTTN---------------NNIYVLDAYGGEKRCGFSLEPS 143 (235)
Q Consensus 80 i~d~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~~~d~~~~~~~~~~~~~~~ 143 (235)
+||.. ++.... ...........+.+++++++|+.+++...+ +.|..||.. ++...... .
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~---~ 170 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT---A 170 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE---E
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc---C
Confidence 99987 432100 000000112457899999999877766554 568888765 54432221 1
Q ss_pred CCcceeeEEe----CCCcEEEE-eCCCCcEEEEEcC-CCc-----eeeeecCCC-cceeEEEeecCCCEEEEcc--cceE
Q 026679 144 PNTNTEATFT----PDGQYVVS-GSGDGTLHAWNIN-TRN-----EVACWNGNI-GVVACLKWAPRRAMFVAAS--SVLS 209 (235)
Q Consensus 144 ~~~i~~~~~~----~~~~~l~~-~~~dg~i~v~d~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~l~~~~--~~i~ 209 (235)
......++++ |+++.|+. ...++.|.+||.. +++ ....+..+. ..+..++++++|+++++.. +.|.
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 1235778999 99976554 4567899999986 443 223333343 5678999999999888753 6799
Q ss_pred EeeCCCC
Q 026679 210 FWIPNPS 216 (235)
Q Consensus 210 iw~~~~~ 216 (235)
+|+.++.
T Consensus 251 ~~d~~~g 257 (314)
T 1pjx_A 251 VFGPDGG 257 (314)
T ss_dssp EECTTCB
T ss_pred EEcCCCC
Confidence 9998743
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.57 E-value=4.8e-13 Score=98.58 Aligned_cols=201 Identities=11% Similarity=0.054 Sum_probs=131.5
Q ss_pred hhcccccceeEEEeecCCC-eeEEEeccceEEEEecCcceeeeeeeccC--CceEEEcCCCCEEEEEecCCeEEEEeccC
Q 026679 9 YFKGHKERVISLCMSPVND-SFMSGSLDHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 85 (235)
.+..+........|+|+++ ++++...++.|..|+. +++. ..+.... ...++++++|+++++...++.|..|+..
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 3444445667889999998 5677777899999997 4443 3333332 2348999999977666666889999875
Q ss_pred CCCCCceeEe--ecC-CCcceeEEEEccCCCeEEE----ecC-------------CCcEEEEEcCCCceeeeeccCCCCC
Q 026679 86 YDKGPFDTFL--VGG-DTAEVCDIKFSNDGKSMLL----TTT-------------NNNIYVLDAYGGEKRCGFSLEPSPN 145 (235)
Q Consensus 86 ~~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~~ 145 (235)
++. .... ... ....+..++++|+|+.+++ +.. .+.|+.+|..+++..... ...
T Consensus 116 g~~---~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~----~~~ 188 (305)
T 3dr2_A 116 GQA---HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA----DLD 188 (305)
T ss_dssp SCE---EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE----EES
T ss_pred CCE---EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe----cCC
Confidence 321 1111 111 1134678999999997775 332 256888887666654332 113
Q ss_pred cceeeEEeCCCcEEEEeCCC------CcEEEEEcCCCcee--eee-cCCCcceeEEEeecCCCEEEEcccceEEeeCCCC
Q 026679 146 TNTEATFTPDGQYVVSGSGD------GTLHAWNINTRNEV--ACW-NGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPS 216 (235)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~d------g~i~v~d~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~ 216 (235)
....++|+|+++.|+.+... +.|++|++..+... ..+ ......+..++++++|++.++..+.|.+|+.++.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~gv~~~~~~g~ 268 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTGVCVFDSDGQ 268 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSEEEEECTTSC
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCcEEEECCCCC
Confidence 36789999999988776554 68999998754311 111 1123456789999999977666566999988655
Q ss_pred CCC
Q 026679 217 SNS 219 (235)
Q Consensus 217 ~~~ 219 (235)
...
T Consensus 269 ~~~ 271 (305)
T 3dr2_A 269 LLG 271 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.55 E-value=2.3e-11 Score=88.94 Aligned_cols=192 Identities=10% Similarity=0.072 Sum_probs=136.3
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeecc----CCceEEEcCCCCEEEEEecCCeEEEEeccCCCCC
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG 89 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 89 (235)
...+.++++.+++.+.++...++.|..+|.. ++.. .+... ....+++.++++++++...++.|..+|.. ++.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~- 136 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI- 136 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE-
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE-
Confidence 3568899999998877777667889999987 5443 22221 12338889999888877778899999876 332
Q ss_pred CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEE
Q 026679 90 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLH 169 (235)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 169 (235)
...........+..+++.++++.+++...++.|..+|. +++... +........+..++++++|++.++....+.|.
T Consensus 137 --~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 137 --YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp --EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred --EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 12223334456889999999996666666788999998 555443 33333335578899999998888777778899
Q ss_pred EEEcCCCceeee-ecCCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 170 AWNINTRNEVAC-WNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 170 v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
+||. +++.... ...+...+.+++++++|++.++.. +.|..|+.+
T Consensus 213 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 213 RITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 9998 5554332 233456788999999998777763 678888874
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.55 E-value=2.3e-11 Score=88.95 Aligned_cols=193 Identities=9% Similarity=0.039 Sum_probs=137.3
Q ss_pred cccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeecc----CCceEEEcCCCCEEEEEecCCeEEEEeccCCCC
Q 026679 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDK 88 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~ 88 (235)
....+.++++.++|+..++...++.|.+||.. ++... +... ....+++++++.++++...++.|..||.. ++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 34578899999999887777778999999987 54433 2221 12238889999888777778899999976 332
Q ss_pred CCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcE
Q 026679 89 GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTL 168 (235)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 168 (235)
...........+..+++.++++.+++...++.|..+|.. ++.. .+........+..++++++|++.++...++.|
T Consensus 95 ---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 95 ---TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp ---EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred ---EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 223333334678899999999877777768899999987 5544 23333233457889999999977777778889
Q ss_pred EEEEcCCCceeee-ecCCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 169 HAWNINTRNEVAC-WNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 169 ~v~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
..||. +++.... ...+...+.++++.+++.+.++.. +.+.+|+.+
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 99998 5554432 223345688999999998777764 568888873
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=3.2e-12 Score=93.76 Aligned_cols=196 Identities=14% Similarity=0.070 Sum_probs=124.7
Q ss_pred cccceeEEEeecCC-CeeEEEeccceEEEEecCcceeeeeeeccC-CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCC
Q 026679 13 HKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRG-RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGP 90 (235)
Q Consensus 13 h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~ 90 (235)
+..---+..|+|++ .++++...++.|..||..+++.. .+.... ...++++++++++++ . ++.|.+||..+++...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence 33445678899965 55666667889999999877653 333332 334899999995554 3 5689999987654211
Q ss_pred ceeEeec--CCCcceeEEEEccCCCeEEEecC-----------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCc
Q 026679 91 FDTFLVG--GDTAEVCDIKFSNDGKSMLLTTT-----------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 91 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
..... .....+..++++|+|+.+++... .+.|+.++.. ++...... .......++|+|+++
T Consensus 88 --~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~---~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 88 --LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD---QVDISNGLDWSLDHK 161 (297)
T ss_dssp --EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE---EESBEEEEEECTTSC
T ss_pred --EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee---ccccccceEEcCCCC
Confidence 11111 12245788999999996665422 2345555432 33322111 113357899999998
Q ss_pred EEE-EeCCCCcEEEEEc--CCCce-----eeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCCCC
Q 026679 158 YVV-SGSGDGTLHAWNI--NTRNE-----VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNPSS 217 (235)
Q Consensus 158 ~l~-~~~~dg~i~v~d~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~ 217 (235)
.|+ +.+.++.|.+|++ .++.. ...+..+...+..+++.++|++.++.. +.|..|+.++++
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 764 5566788999997 45543 222333345788999999998777764 569999987544
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.53 E-value=2e-12 Score=97.02 Aligned_cols=209 Identities=9% Similarity=-0.061 Sum_probs=134.2
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEe----------ccceEEEEecCcceeeeeeecc---------CCceEEE
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGS----------LDHSVRIWDLRVNACQGILRLR---------GRPTVAF 62 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~---------~~~~~~~ 62 (235)
++++.+.++..-..+ .+.++||+++++.+. .++.|.+||+.+++.+..+..+ ....+++
T Consensus 54 ~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~ 131 (368)
T 1mda_H 54 GCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp TTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred CCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE
Confidence 456666677655556 799999999888876 4789999999999999998754 2334999
Q ss_pred cCCCCEEEEEec--CCeEEE--EeccCCCCCCceeEeecC----------------CCcceeEEE---------------
Q 026679 63 DQQGLVFAVAME--AGAIKL--FDSRSYDKGPFDTFLVGG----------------DTAEVCDIK--------------- 107 (235)
Q Consensus 63 ~~~~~~l~~~~~--dg~v~i--~d~~~~~~~~~~~~~~~~----------------~~~~v~~~~--------------- 107 (235)
+|+|++++++.. +..+.+ +|+.+. ......+ ..+.+..+.
T Consensus 132 SpDGk~lyVan~~~~~~v~V~~iD~~tv-----~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~ 206 (368)
T 1mda_H 132 CASSACLLFFLFGSSAAAGLSVPGASDD-----QLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQC 206 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTEEE-----EEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCS
T ss_pred cCCCCEEEEEccCCCCeEEEEEEchhhc-----eEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEe
Confidence 999999998875 457888 888550 0110000 000000000
Q ss_pred -----------EccCCCeEEEecCCCcEEEEEcCCCc--eeeeeccCC--------CCCcceeeEEeCCCcEEEEeCC--
Q 026679 108 -----------FSNDGKSMLLTTTNNNIYVLDAYGGE--KRCGFSLEP--------SPNTNTEATFTPDGQYVVSGSG-- 164 (235)
Q Consensus 108 -----------~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~-- 164 (235)
..+++..++..+. +.+.+.|..+.. ....+.... .+.....++++|+++.++++..
T Consensus 207 t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~ 285 (368)
T 1mda_H 207 TGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEH 285 (368)
T ss_dssp CTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred eeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccc
Confidence 0333444444444 677777775432 222221110 0111223789999998876533
Q ss_pred -------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCE-EEEcc---cceEEeeCCCCCCC
Q 026679 165 -------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM-FVAAS---SVLSFWIPNPSSNS 219 (235)
Q Consensus 165 -------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~---~~i~iw~~~~~~~~ 219 (235)
++.+.++|+.+++.+..+... ....+++|+||++. +++.. +++.++|+.+.+..
T Consensus 286 ~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 286 SRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp SSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEE
T ss_pred cCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEE
Confidence 235669999999998888744 36899999999974 33332 67999999876543
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.53 E-value=7.6e-12 Score=93.01 Aligned_cols=190 Identities=12% Similarity=0.039 Sum_probs=123.2
Q ss_pred ceeEEEeecCC-CeeEEEeccceEEEEecCcceeeeeeecc-CCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCcee
Q 026679 16 RVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDT 93 (235)
Q Consensus 16 ~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~ 93 (235)
...+..|+|++ .++++...++.|..||..+++... +... ....++++++++++++. . ..|.+||..+++. ..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~---~~ 123 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVL---TL 123 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCE---EE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcE---EE
Confidence 34678899975 456666678899999998776433 3322 23348899999877654 4 4599999876542 11
Q ss_pred Eeec---CCCcceeEEEEccCCCeEEEecC------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE-eC
Q 026679 94 FLVG---GDTAEVCDIKFSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS-GS 163 (235)
Q Consensus 94 ~~~~---~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~ 163 (235)
.... .....+..++++|+|+.+++... .+.|..++ +++...... .......++|+|+++.|+. .+
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~---~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA---DISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE---EESSEEEEEECTTSCEEEEEET
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC---CCcccCCeEEcCCCCEEEEEEC
Confidence 1111 11245889999999986655432 24566676 454332211 1123578999999987654 45
Q ss_pred CCCcEEEEEcC--CC-ce-----eeeecCCCcceeEEEeecCCCEEEEc--ccceEEeeCCCC
Q 026679 164 GDGTLHAWNIN--TR-NE-----VACWNGNIGVVACLKWAPRRAMFVAA--SSVLSFWIPNPS 216 (235)
Q Consensus 164 ~dg~i~v~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~--~~~i~iw~~~~~ 216 (235)
.++.|.+||+. ++ +. ...+......+..+++.++|.+.++. ++.|.+|+.+..
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~ 261 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGN 261 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCC
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCC
Confidence 67899999986 55 32 22233334567889999999887776 367999988543
No 212
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.52 E-value=6.2e-12 Score=89.75 Aligned_cols=204 Identities=13% Similarity=0.086 Sum_probs=138.0
Q ss_pred hhhhhhhccccc--ceeEEEeecCCCeeEEEec--cceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEE-ecCCe
Q 026679 4 NRILRYFKGHKE--RVISLCMSPVNDSFMSGSL--DHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVA-MEAGA 77 (235)
Q Consensus 4 ~~~~~~~~~h~~--~v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~dg~ 77 (235)
.+.++++. |.. ....+.|++++.++++.+. ++.|++.|+.+++.+..+....... ..+..+++.++.+ -.++.
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSE
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCE
Confidence 34555563 443 3579999998755555443 5799999999999988887544322 2233335455544 45789
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCC---CcceeeEEeC
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---NTNTEATFTP 154 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---~~i~~~~~~~ 154 (235)
+.++|..+.+. ...+... ... ...+++||+.++++..++.|.++|..+.+....+...... ..++.+.|.
T Consensus 88 v~viD~~t~~v--~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 88 GFIYDRRTLSN--IKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp EEEEETTTTEE--EEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEEECCCCcE--EEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 99999987654 1122222 111 2346678888888878899999999998887776654322 125678888
Q ss_pred CCcEEEEeCCCCcEEEEEcCCCceeeeecCC-------------CcceeEEEeecCCCEEEEcc---cceEEeeCCC
Q 026679 155 DGQYVVSGSGDGTLHAWNINTRNEVACWNGN-------------IGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 215 (235)
Q Consensus 155 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~ 215 (235)
+|...+....++.|.+.|..+++.+..+... ......|+|+|+++.+..++ ..+...++..
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 7766666666889999999999988887532 12558999999987666665 5566666644
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.52 E-value=1.1e-11 Score=91.25 Aligned_cols=193 Identities=8% Similarity=0.041 Sum_probs=125.7
Q ss_pred hhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec------cCCceEEEcCCCCEEEE----Eec----
Q 026679 9 YFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL------RGRPTVAFDQQGLVFAV----AME---- 74 (235)
Q Consensus 9 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~----~~~---- 74 (235)
.+..+...+..++++++|+++++...++.|.+|+.+ ++....... .....++++++|+++++ |..
T Consensus 80 ~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 80 VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGG
T ss_pred EEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccc
Confidence 344456678899999999876666566789999975 543322211 11234899999998876 321
Q ss_pred ---------CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCC------CcEEEEEcCCCceeee-e
Q 026679 75 ---------AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN------NNIYVLDAYGGEKRCG-F 138 (235)
Q Consensus 75 ---------dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~-~ 138 (235)
.+.|..+|..+++. ... . .......++|+|+++.|+.+... +.|.+|++..+..... .
T Consensus 159 ~~~~~~~~~~~~v~~~d~~~g~~---~~~-~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~ 232 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPDGSPL---QRM-A--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRH 232 (305)
T ss_dssp SCCCCCSSSCEEEEEECSSSCCC---EEE-E--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEE
T ss_pred ccccccccCCCeEEEEcCCCCcE---EEE-e--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeE
Confidence 25677777755543 111 1 23456789999999988777665 7899999876542111 1
Q ss_pred ccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEee
Q 026679 139 SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWI 212 (235)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~ 212 (235)
...........++++++|++. +++.+| |.+|+. +++.+..+..+. .+.+++|.|+++.|..++ +.+..++
T Consensus 233 ~~~~~~~~pdgi~~d~~G~lw-v~~~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 233 FASVPDGLPDGFCVDRGGWLW-SSSGTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp EECCSSSCCCSEEECTTSCEE-ECCSSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred EEECCCCCCCeEEECCCCCEE-EecCCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 111122345678999999944 444454 999997 677777776554 589999999987766665 5444433
No 214
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=4.4e-12 Score=104.29 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=129.6
Q ss_pred eeEEEeecCCCeeEEEeccce--------------EEEEecCccee--eeeeeccC----CceEEEcCCCCEEEEEecCC
Q 026679 17 VISLCMSPVNDSFMSGSLDHS--------------VRIWDLRVNAC--QGILRLRG----RPTVAFDQQGLVFAVAMEAG 76 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~d~~--------------i~vwd~~~~~~--~~~~~~~~----~~~~~~~~~~~~l~~~~~dg 76 (235)
+..++|+|| +.|+.++.|+. |++|++.++.. ...+.... ...+.|+|+|+.|+..+.++
T Consensus 211 ~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 211 FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 367899999 98888877654 88999877653 22333222 22388999999988887654
Q ss_pred -----eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC----CCcEEEEEcCCCc-eeeeeccCCCCCc
Q 026679 77 -----AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT----NNNIYVLDAYGGE-KRCGFSLEPSPNT 146 (235)
Q Consensus 77 -----~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~-~~~~~~~~~~~~~ 146 (235)
.+.+||+.++..... . .+..+....... ++|+|+.|+..+. ++.|.+||+.++. ....+. ..+...
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~-~-~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~ 365 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPV-T-ALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDN 365 (741)
T ss_dssp TCSCCEEEEEEEETTEECCC-E-EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSE
T ss_pred CCCcceEEEEECCCCCCccc-E-EecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCe
Confidence 899999987521101 1 222333334444 3488998888775 3459999988742 222222 223344
Q ss_pred ceeeEEeCCCcEEEEeCCCCcEEEEEcC-CCceeeeecC-CCcceeEEEeecCCCEEEEc--c----cceEEeeCCCCCC
Q 026679 147 NTEATFTPDGQYVVSGSGDGTLHAWNIN-TRNEVACWNG-NIGVVACLKWAPRRAMFVAA--S----SVLSFWIPNPSSN 218 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~----~~i~iw~~~~~~~ 218 (235)
+..+.++ ++.++++...|+..++|.+. +++....+.. ..+.+..+.++|++..++.. + +.+++||+.+++.
T Consensus 366 l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 366 LESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp EEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred EEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 6677777 56677888888887776554 4555555654 35678899999998766533 2 6799999877654
Q ss_pred CCC
Q 026679 219 STD 221 (235)
Q Consensus 219 ~~~ 221 (235)
..+
T Consensus 445 ~~l 447 (741)
T 1yr2_A 445 TPW 447 (741)
T ss_dssp EEC
T ss_pred EEE
Confidence 333
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.51 E-value=1.5e-11 Score=94.19 Aligned_cols=188 Identities=9% Similarity=0.050 Sum_probs=124.3
Q ss_pred EEeecCCCeeEEEeccc--eEEEEecCcceeeeee------eccCCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCc
Q 026679 20 LCMSPVNDSFMSGSLDH--SVRIWDLRVNACQGIL------RLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 20 ~~~~~~~~~l~s~~~d~--~i~vwd~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
++|+++++.|+++..++ .|.+++...+.....+ .......++++|++..|+++..++.|..||..+...
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~--- 252 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV--- 252 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE---
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE---
Confidence 89999999888888766 7888887765543333 122234589999555566677788999999876542
Q ss_pred eeEe---ecCCCcce--eEEEEccC-CCeEEEecCCCcEEEEEcCCCceeeeeccCC-------------CCCcceeeEE
Q 026679 92 DTFL---VGGDTAEV--CDIKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP-------------SPNTNTEATF 152 (235)
Q Consensus 92 ~~~~---~~~~~~~v--~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~~~i~~~~~ 152 (235)
.... ..+....- ..++|+|+ +..+++-..++.|+.|+.... .. .+.... .-.....+++
T Consensus 253 ~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~-~~~g~~~~~g~~dg~~~~~~~~~P~gia~ 330 (409)
T 3hrp_A 253 TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CE-WFCGSATQKTVQDGLREEALFAQPNGMTV 330 (409)
T ss_dssp EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EE-EEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EE-EEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence 1110 11111111 28999995 555556666889999997543 22 221111 0134678999
Q ss_pred eCCCcEEEEeC-CCCcEEEEEcCCCceeeeecCC---------------CcceeEEEeecCCCEEEEcc--cceEEeeC
Q 026679 153 TPDGQYVVSGS-GDGTLHAWNINTRNEVACWNGN---------------IGVVACLKWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 153 ~~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
+|+|+++++-. .++.|+.|++.+++. ..+.++ -.....++++|++.++++-. +.|+.+.+
T Consensus 331 d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 331 DEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 99999888887 889999999877764 333333 23578999999987777665 44555543
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=2e-12 Score=97.42 Aligned_cols=136 Identities=13% Similarity=0.180 Sum_probs=102.2
Q ss_pred ccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCc
Q 026679 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
.+.. |+.++| ++++|+++ .++.|++||+.+.........+...+..+.+-...++++..||.+.+||+.+...
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~--- 158 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKST--- 158 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE---
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcc---
Confidence 3556 999999 88999998 8899999999876655555555544433333333489999999999999987553
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCce--eeeecc----C---CCCCcceeeEEeCCCcEEEE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK--RCGFSL----E---PSPNTNTEATFTPDGQYVVS 161 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~~~~~~----~---~~~~~i~~~~~~~~~~~l~~ 161 (235)
. . +...|++++|+|+| ++.+..||.+++|+...++. ...+.. . .+...|.++.|.+++.++++
T Consensus 159 -~-~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 159 -K-Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp -E-E---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred -c-c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 1 1 33589999999999 67899999999999877764 333311 1 24577999999999999886
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.50 E-value=3.7e-11 Score=89.32 Aligned_cols=182 Identities=15% Similarity=0.135 Sum_probs=120.8
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC------CceEEEcCCCCEEEEEec------CCeEEEE
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG------RPTVAFDQQGLVFAVAME------AGAIKLF 81 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~------dg~v~i~ 81 (235)
...+.+++|+++|+++++. .+ .|.+||..+++......... ...++++|+|+++++... .+.|..+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 4578999999998877654 44 49999988776543332211 223889999997665543 2455555
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEe-cCCCcEEEEEcC--CC-cee--eee-ccCCCCCcceeeEEeC
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAY--GG-EKR--CGF-SLEPSPNTNTEATFTP 154 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~--~~-~~~--~~~-~~~~~~~~i~~~~~~~ 154 (235)
+ +++ ...+.........++|+|+++.++.+ +.++.|.+||+. ++ +.. ..+ ........+..+++++
T Consensus 167 ~--~g~-----~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 167 A--KGK-----VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA 239 (326)
T ss_dssp E--TTE-----EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT
T ss_pred e--CCc-----EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC
Confidence 5 222 11111222346789999999876555 457899999986 55 321 111 1222234567899999
Q ss_pred CCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEee-cCCCEEEEcc
Q 026679 155 DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA-PRRAMFVAAS 205 (235)
Q Consensus 155 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 205 (235)
+|++.++...++.|.+||. +++.+..+..+...+++++|. |++..|..++
T Consensus 240 ~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 240 EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 9988777766788999998 677777777666679999998 8877665443
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.49 E-value=8.6e-12 Score=93.70 Aligned_cols=194 Identities=11% Similarity=0.046 Sum_probs=133.1
Q ss_pred eeEEEeecCCCeeEEEec-----cceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEe----------cCCeEEEE
Q 026679 17 VISLCMSPVNDSFMSGSL-----DHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAM----------EAGAIKLF 81 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~-----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~dg~v~i~ 81 (235)
.......|+++.++.... ++.|.+.|..+++.+..+.....+.++++|+++.++++. .++.|.+|
T Consensus 35 ~~~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 35 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred ceeeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 334566789988887765 679999999999999998876666699999999888776 36789999
Q ss_pred eccCCCCCCceeEeecC-----CCcceeEEEEccCCCeEEEecC--CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeC
Q 026679 82 DSRSYDKGPFDTFLVGG-----DTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP 154 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~ 154 (235)
|..+.+. ........ .......++++|||++++++.. ++.|.++|+.+++.+..+..... ...+..
T Consensus 115 D~~t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-----~~~~P~ 187 (386)
T 3sjl_D 115 DPVTLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-----YHIFPT 187 (386)
T ss_dssp CTTTCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEEE
T ss_pred ECCCCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-----ceeecC
Confidence 9988664 11222221 0124557899999999888764 68999999999999888765431 123333
Q ss_pred CCcEEEEeCCCCcEEEEEcCC-CceeeeecCC----Ccce-eEEEee-cCCCEEEEc-ccceEEeeCCCCC
Q 026679 155 DGQYVVSGSGDGTLHAWNINT-RNEVACWNGN----IGVV-ACLKWA-PRRAMFVAA-SSVLSFWIPNPSS 217 (235)
Q Consensus 155 ~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~----~~~v-~~~~~~-~~~~~l~~~-~~~i~iw~~~~~~ 217 (235)
..+.+++.+.||.+.+.++.+ ++.......+ ..++ ....|. ++|+++..+ ++.+.+.|..+..
T Consensus 188 g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 188 APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGD 258 (386)
T ss_dssp ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSS
T ss_pred CCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCc
Confidence 445666777788888888865 4442211111 1222 224664 688665444 4889999987654
No 219
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.49 E-value=1.5e-11 Score=86.88 Aligned_cols=198 Identities=12% Similarity=0.129 Sum_probs=134.4
Q ss_pred hhhhhcccccc--eeEEEeecCCCeeEEEeccc--eEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEEe-cCCeEE
Q 026679 6 ILRYFKGHKER--VISLCMSPVNDSFMSGSLDH--SVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVAM-EAGAIK 79 (235)
Q Consensus 6 ~~~~~~~h~~~--v~~~~~~~~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~-~dg~v~ 79 (235)
.++++ .|... ...+.|+ ++.++.+.+.+| .|+++|+++++.+..+....... ..+.++++.|.... .++.+.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 34445 34332 4678888 666667777765 89999999999998887765432 33344455555554 588999
Q ss_pred EEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCC---CcceeeEEeCCC
Q 026679 80 LFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---NTNTEATFTPDG 156 (235)
Q Consensus 80 i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---~~i~~~~~~~~~ 156 (235)
+||..+.+. ...+.... ....++++++.|+.+..++.|.++|..+.+....+...... ..++.+.|. +|
T Consensus 111 v~D~~t~~~--~~ti~~~~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 111 VWNIRNLRQ--VRSFNYDG-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp EEETTTCCE--EEEEECSS-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEECccCcE--EEEEECCC-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 999988764 12222222 22334467888888777888999999999888776654322 224457776 77
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCC------------CcceeEEEeecCCCEEEEcccc-eEEeeC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGN------------IGVVACLKWAPRRAMFVAASSV-LSFWIP 213 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~~-i~iw~~ 213 (235)
+..+..-.+..|.+.|.++++.+..+... ......|+|+|+++.|...++. =++|.+
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev 252 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEI 252 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEE
Confidence 76666667889999999999988776532 1356899999988877777732 444443
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=1.5e-11 Score=92.03 Aligned_cols=194 Identities=9% Similarity=0.071 Sum_probs=125.1
Q ss_pred ccccceeEEEeecCCCeeEEEec-----cceEEEEecCcceeeeeeeccC--------CceEEEcCCCCEE-EEEe---c
Q 026679 12 GHKERVISLCMSPVNDSFMSGSL-----DHSVRIWDLRVNACQGILRLRG--------RPTVAFDQQGLVF-AVAM---E 74 (235)
Q Consensus 12 ~h~~~v~~~~~~~~~~~l~s~~~-----d~~i~vwd~~~~~~~~~~~~~~--------~~~~~~~~~~~~l-~~~~---~ 74 (235)
+|...+.+++++++++++++-.. ++.|.+||+.+++.+..+..+. ...+++++++..+ ++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 35568899999999876665433 5789999999998777665431 1348899865444 4444 5
Q ss_pred CCeEEEEeccCCCCCCc-----------eeEeecC--------------CCcceeEEEEccCCCeEEEecCCC-cEEEEE
Q 026679 75 AGAIKLFDSRSYDKGPF-----------DTFLVGG--------------DTAEVCDIKFSNDGKSMLLTTTNN-NIYVLD 128 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~-----------~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d 128 (235)
++.|.+||+.+++.... ..+...+ ....+..++|+|+++.|+.+...+ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 78999999876432000 0000000 012367899999999888877655 565555
Q ss_pred cC---CCc-----eeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecC-CCcceeEEEeecCCC
Q 026679 129 AY---GGE-----KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG-NIGVVACLKWAPRRA 199 (235)
Q Consensus 129 ~~---~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 199 (235)
.. .+. ....+....+......++++++|+++++...++.|.+||..+++....... +...+.+++|.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc
Confidence 32 111 000011101122356799999999999998899999999856654333322 234688999999998
Q ss_pred EEEEcc
Q 026679 200 MFVAAS 205 (235)
Q Consensus 200 ~l~~~~ 205 (235)
++++.+
T Consensus 304 l~v~~~ 309 (343)
T 2qe8_A 304 LYFDCN 309 (343)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 887776
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.47 E-value=1.5e-14 Score=109.33 Aligned_cols=180 Identities=14% Similarity=0.070 Sum_probs=98.8
Q ss_pred CCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCC-cce
Q 026679 25 VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT-AEV 103 (235)
Q Consensus 25 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~-~~v 103 (235)
++..+++++.|+.|+.||..+++.+..+.........+..++..+++++.||.++.||..+++.. .....+. ..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~----w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL----TKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC-----CCS----EECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCCCcee----eeeeccCcccc
Confidence 46789999999999999999999988877633333344557778888889999999999877641 1111111 111
Q ss_pred e-EEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeee
Q 026679 104 C-DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182 (235)
Q Consensus 104 ~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 182 (235)
. ...+. ++..+++++.++.++.||..+|+....+.... ...++|++..+++++.|+.|+.||.++++.+..+
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 1 01111 34567888889999999999998876554432 1356678889999999999999999999877665
Q ss_pred cCCCcceeEEEeecC----CCEEEEcc-cceEEeeCCCCC
Q 026679 183 NGNIGVVACLKWAPR----RAMFVAAS-SVLSFWIPNPSS 217 (235)
Q Consensus 183 ~~~~~~v~~~~~~~~----~~~l~~~~-~~i~iw~~~~~~ 217 (235)
..+. .....+.++ +.+++.+. +.+..||.++++
T Consensus 157 ~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 157 TYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp EEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred eccc--ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 4221 222333432 34443333 778999887654
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=1.7e-11 Score=92.12 Aligned_cols=197 Identities=11% Similarity=0.064 Sum_probs=131.0
Q ss_pred eeEEEeecCCCeeEEEec--cceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEEeccC-CCCCCcee
Q 026679 17 VISLCMSPVNDSFMSGSL--DHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRS-YDKGPFDT 93 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~-~~~~~~~~ 93 (235)
-..+.|+|||++++.+.. ++.|.++|+.+++.+..+..... ...+....+.+++.+.||.+.+.++.. ++. ...
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v--~~~ 215 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP--EIT 215 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEEEEETTSCEEEEECCSSSCC--EEE
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-ceeecCCCceeEEECCCCCEEEEECCCCCeE--EEe
Confidence 345899999999888764 68999999999999988876542 222333445677777788888888765 332 111
Q ss_pred Ee--ecCCCccee-EEEEc-cCCCeEEEecCCCcEEEEEcCCCc--eeeeecc--------CCCCCcceeeEEeCCCcEE
Q 026679 94 FL--VGGDTAEVC-DIKFS-NDGKSMLLTTTNNNIYVLDAYGGE--KRCGFSL--------EPSPNTNTEATFTPDGQYV 159 (235)
Q Consensus 94 ~~--~~~~~~~v~-~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~--------~~~~~~i~~~~~~~~~~~l 159 (235)
.. +.....++. ...|. ++|++++ .+.+|.|++.|+.++. ....+.. ...+.....++++|+++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~l 294 (386)
T 3sjl_D 216 HTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRI 294 (386)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEE
T ss_pred ecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeE
Confidence 10 001112222 24564 5776444 5668999999997664 2222220 1112334558889999888
Q ss_pred EEeCC----------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCC-EEEEcc---cceEEeeCCCCCC
Q 026679 160 VSGSG----------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA-MFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 160 ~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~---~~i~iw~~~~~~~ 218 (235)
+.... .+.|.++|+.+++.+..+.. ...+.+|+++||++ +|+++. +++.++|..+.+.
T Consensus 295 yV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 295 YLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp EEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 77642 25699999999999988863 34788999999996 666543 7899999977654
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.40 E-value=5.6e-11 Score=90.22 Aligned_cols=185 Identities=10% Similarity=0.111 Sum_probs=123.8
Q ss_pred eEEEeecCCCeeEEEecc------ceEEEEecCcceeeeeeeccCCce-----EEEcCCCCEEEEEe-------------
Q 026679 18 ISLCMSPVNDSFMSGSLD------HSVRIWDLRVNACQGILRLRGRPT-----VAFDQQGLVFAVAM------------- 73 (235)
Q Consensus 18 ~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~------------- 73 (235)
..+..+|+| .++++..+ +.+.+.|.++++.+..+....... +.|+|+++.+++..
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCT
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccch
Confidence 456778998 76766655 789999999999998887543321 77899999888885
Q ss_pred ------cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEE--ccCCCeEEEecC------CCcEEEEEcCCCceeee--
Q 026679 74 ------EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF--SNDGKSMLLTTT------NNNIYVLDAYGGEKRCG-- 137 (235)
Q Consensus 74 ------~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~-- 137 (235)
....|.+||+.+.+. .....+.........+.| +|+++++++++. +++|.+|....++....
T Consensus 220 ~~~~~~~~d~V~v~D~~~~k~--~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v 297 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLRKRKR--IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV 297 (462)
T ss_dssp TTHHHHSCCEEEEEETTTTEE--EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE
T ss_pred hhhhhccCCEEEEEECCCCcE--eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE
Confidence 368999999987532 222232212233455555 999998887774 56787766544322111
Q ss_pred eccCCC----------------CCcceeeEEeCCCcEEEEeCC-CCcEEEEEcCC---CceeeeecCCC-----------
Q 026679 138 FSLEPS----------------PNTNTEATFTPDGQYVVSGSG-DGTLHAWNINT---RNEVACWNGNI----------- 186 (235)
Q Consensus 138 ~~~~~~----------------~~~i~~~~~~~~~~~l~~~~~-dg~i~v~d~~~---~~~~~~~~~~~----------- 186 (235)
+..... ......+.++|||++|+++.. .+.|.+||+.+ .+.+..+....
T Consensus 298 Idi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~ 377 (462)
T 2ece_A 298 IEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGH 377 (462)
T ss_dssp EEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSC
T ss_pred EeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccc
Confidence 101100 134678999999999977654 68899999863 33444443210
Q ss_pred ---cceeEEEeecCCCEEEEcc
Q 026679 187 ---GVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 187 ---~~v~~~~~~~~~~~l~~~~ 205 (235)
+....++++|||++|+++.
T Consensus 378 ~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 378 KLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCSCCCCEEECTTSSEEEEEC
T ss_pred cCCCCCCEEEEcCCCCEEEEEc
Confidence 1368899999999998887
No 224
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.39 E-value=5.2e-11 Score=93.35 Aligned_cols=199 Identities=12% Similarity=0.033 Sum_probs=135.3
Q ss_pred cceeEEEe-e-cCCCeeEEEe------------------ccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEEe
Q 026679 15 ERVISLCM-S-PVNDSFMSGS------------------LDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVAM 73 (235)
Q Consensus 15 ~~v~~~~~-~-~~~~~l~s~~------------------~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 73 (235)
.....+++ + |++++++.++ .++.+.+.|.++.+....+.....+- ++++|+|+++++.+
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEe
Confidence 34678887 5 8999988874 35689999999999888888655443 99999999999888
Q ss_pred cCC--------------------------------------eEEEEeccCCCCCC-ceeEeecCCCcceeEEEEccCCCe
Q 026679 74 EAG--------------------------------------AIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKS 114 (235)
Q Consensus 74 ~dg--------------------------------------~v~i~d~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ 114 (235)
.+. .|.+.|.++.+... ...... .....++.++|||++
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv---g~~PhGv~~sPDGk~ 290 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI---ANNPHGCNMAPDKKH 290 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE---ESSCCCEEECTTSSE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec---CCCceEEEEcCCCCE
Confidence 543 35555655421111 111111 234567899999998
Q ss_pred EEEec-CCCcEEEEEcCCCc------------eeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCC------
Q 026679 115 MLLTT-TNNNIYVLDAYGGE------------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT------ 175 (235)
Q Consensus 115 l~~~~-~d~~i~~~d~~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~------ 175 (235)
+++++ .+.+|.++|+.+.+ ...... .. .....++|+|+|....+...|+.|.+||+.+
T Consensus 291 v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--vG-~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~ 367 (595)
T 1fwx_A 291 LCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--LG-LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYA 367 (595)
T ss_dssp EEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--CC-SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred EEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--CC-CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhc
Confidence 87766 47899999998653 222222 22 2367899999995555677799999999976
Q ss_pred ----CceeeeecCCCcc-----eeEEEeecCCCEEEEcc----cce-----------EEeeCCCCCCC
Q 026679 176 ----RNEVACWNGNIGV-----VACLKWAPRRAMFVAAS----SVL-----------SFWIPNPSSNS 219 (235)
Q Consensus 176 ----~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~----~~i-----------~iw~~~~~~~~ 219 (235)
.+.+..+..|-.+ -.++.++|||++|+++. ..+ .++|+.+.+..
T Consensus 368 g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 368 GEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp TCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCE
T ss_pred ccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEE
Confidence 4455555554332 13345689999999986 224 88998665543
No 225
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.36 E-value=1.4e-09 Score=82.27 Aligned_cols=186 Identities=10% Similarity=-0.027 Sum_probs=122.9
Q ss_pred EeecCCCeeEEEec--cc---eEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEe----------cCCeEEEEeccC
Q 026679 21 CMSPVNDSFMSGSL--DH---SVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAM----------EAGAIKLFDSRS 85 (235)
Q Consensus 21 ~~~~~~~~l~s~~~--d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~dg~v~i~d~~~ 85 (235)
...|++++++.... .. +|.++|..+++.+..+.....+-++++|+++.++++. .++.|.+||..+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 44577877776653 22 8899999999988888766555799999999999886 367899999987
Q ss_pred CCCCCceeEeec--C---CCcceeEEEEccCCCeEEEecC--CCcEEEEEcCCCceeee-eccCCCCCcceeeEEeCCC-
Q 026679 86 YDKGPFDTFLVG--G---DTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCG-FSLEPSPNTNTEATFTPDG- 156 (235)
Q Consensus 86 ~~~~~~~~~~~~--~---~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~-~~~~~~~~~i~~~~~~~~~- 156 (235)
.+.. ...... . .......++|+|||++|+++.. ++.|.++| .+++.... +.... ++.+.|++
T Consensus 107 ~~~~--~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~------~~~~~~~~~ 177 (373)
T 2mad_H 107 FLPI--ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT------CYHIHPGAP 177 (373)
T ss_pred CcEE--EEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc------eEEEEeCCC
Confidence 5531 111111 0 0123457899999999998874 57899999 99988766 54322 24555654
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeec-----CCCcc-eeEEEeecCCCE-EEEc-ccceEEeeCCCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWN-----GNIGV-VACLKWAPRRAM-FVAA-SSVLSFWIPNPS 216 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~-l~~~-~~~i~iw~~~~~ 216 (235)
+.+++.+.||.+.++|. +++.+.... ....+ .....+.+++.. ++.. .+.+.+.|+...
T Consensus 178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 45566778999999999 877663321 11112 123455665443 3222 366777777543
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=1.6e-10 Score=86.50 Aligned_cols=196 Identities=8% Similarity=0.034 Sum_probs=122.1
Q ss_pred cceeEEEeecCCCeeEEEec--cceEEEEecCcceeeeeeec-------c--CCceEEEcCCCCEEEEEec-----CCeE
Q 026679 15 ERVISLCMSPVNDSFMSGSL--DHSVRIWDLRVNACQGILRL-------R--GRPTVAFDQQGLVFAVAME-----AGAI 78 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~-------~--~~~~~~~~~~~~~l~~~~~-----dg~v 78 (235)
.....++++++|+.+++... ++.++||.+.+++.. .+.. + ....++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 57889999999998888642 343556665445432 1211 1 1123899999886666544 5789
Q ss_pred EEEeccCCCCCCceeEeec----CCCcceeEEEEccCCCeE-EEec---CCCcEEEEEcCCCceeeeeccCCC-------
Q 026679 79 KLFDSRSYDKGPFDTFLVG----GDTAEVCDIKFSNDGKSM-LLTT---TNNNIYVLDAYGGEKRCGFSLEPS------- 143 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l-~~~~---~d~~i~~~d~~~~~~~~~~~~~~~------- 143 (235)
.+||+.+++. .....+. .+...+..+++++++..+ ++.. .++.|.+||+.+++.......+..
T Consensus 96 ~~~d~~tg~~--~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 96 VAWDTLNNQL--SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEETTTTEE--EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred EEEECCCCeE--EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 9999987552 1122221 122456889999865454 4444 578899999987765543321100
Q ss_pred --------------------CCcceeeEEeCCCcEEEEeCCCC-cEEEEEcC---CCc-----eee--eecCCCcceeEE
Q 026679 144 --------------------PNTNTEATFTPDGQYVVSGSGDG-TLHAWNIN---TRN-----EVA--CWNGNIGVVACL 192 (235)
Q Consensus 144 --------------------~~~i~~~~~~~~~~~l~~~~~dg-~i~v~d~~---~~~-----~~~--~~~~~~~~v~~~ 192 (235)
...+..++|+|+|+.|+.+..++ .++.++.. .+. ... ...++......+
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 01257799999999888776655 55555532 111 011 111233456789
Q ss_pred EeecCCCEEEEcc--cceEEeeC
Q 026679 193 KWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 193 ~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
+++++|.++++.. +.|.+|+.
T Consensus 254 a~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EECTTCCEEEEEGGGTEEEEEET
T ss_pred EECCCCCEEEEccCCCeEEEEEC
Confidence 9999998888775 67999998
No 227
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=6.5e-11 Score=96.66 Aligned_cols=193 Identities=13% Similarity=0.144 Sum_probs=123.2
Q ss_pred eeEEEeecCCCeeEEEeccce-------------EEEEecCccee--eeeeecc---CC--ceEEEcCCCCEEEEEec--
Q 026679 17 VISLCMSPVNDSFMSGSLDHS-------------VRIWDLRVNAC--QGILRLR---GR--PTVAFDQQGLVFAVAME-- 74 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~d~~-------------i~vwd~~~~~~--~~~~~~~---~~--~~~~~~~~~~~l~~~~~-- 74 (235)
...++|+ |++.|+.++.+.. |++|++.++.. ...+... .. ..+.++|+|++|+....
T Consensus 177 ~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 177 FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 3578999 9999988887743 99999877643 2233322 22 23789999998866543
Q ss_pred --CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC----CCcEEEEEcCCCce--eeeeccCCCCCc
Q 026679 75 --AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT----NNNIYVLDAYGGEK--RCGFSLEPSPNT 146 (235)
Q Consensus 75 --dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~~~--~~~~~~~~~~~~ 146 (235)
...+.++|+.+.... ...+..+....... ++++|..|+..+. .+.|..+|+.++.. ...+..+. ..
T Consensus 256 ~~~~~i~~~d~~~~~~~---~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~--~~ 329 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAP---LLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPER--QQ 329 (693)
T ss_dssp SSCCEEEEEETTSTTCC---CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC--SS
T ss_pred CCCcEEEEEECCCCCCc---eEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCC--CC
Confidence 248999998775421 12223344444444 6777776665543 36799999987654 22333332 22
Q ss_pred ceeeEEeCCCcEEEEeCCC-C--cEEEEEcCCCceeeeec-CCCcceeEEEeecCCCEEEEc--c----cceEEeeCCCC
Q 026679 147 NTEATFTPDGQYVVSGSGD-G--TLHAWNINTRNEVACWN-GNIGVVACLKWAPRRAMFVAA--S----SVLSFWIPNPS 216 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~d-g--~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~--~----~~i~iw~~~~~ 216 (235)
+. .|++++++|+....+ + .|++||+..+ ....+. ...+.+..+.++|++..++.. + +.+..||+.+.
T Consensus 330 ~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 330 VL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp CE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EE--EEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 33 899999888766554 3 6899998644 344443 234567788888888766544 2 56888888766
Q ss_pred CCC
Q 026679 217 SNS 219 (235)
Q Consensus 217 ~~~ 219 (235)
+..
T Consensus 407 ~~~ 409 (693)
T 3iuj_A 407 AIS 409 (693)
T ss_dssp CEE
T ss_pred eEE
Confidence 543
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.35 E-value=1e-09 Score=76.94 Aligned_cols=199 Identities=11% Similarity=0.076 Sum_probs=133.0
Q ss_pred hhhhhhcccc--cceeEEEeecCCCeeEEEeccc--eEEEEecCcceeeeeeeccCCce-EEEcCCC-CEEEEEecCCeE
Q 026679 5 RILRYFKGHK--ERVISLCMSPVNDSFMSGSLDH--SVRIWDLRVNACQGILRLRGRPT-VAFDQQG-LVFAVAMEAGAI 78 (235)
Q Consensus 5 ~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~-~~l~~~~~dg~v 78 (235)
+.++++ .|. .-...+.|++ +.++.+.+.+| .|+++|+++++.+..+....... ..+.+.+ +++...-.++.+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEE
Confidence 344455 354 3456889986 55666666654 89999999999998887765432 2223334 444455568999
Q ss_pred EEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCC---CcceeeEEeCC
Q 026679 79 KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP---NTNTEATFTPD 155 (235)
Q Consensus 79 ~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~---~~i~~~~~~~~ 155 (235)
.+||..+.+. ...+.... .-. .+.+++..|+.+..++.|.++|..+.+....+....+. ..++.+.+. +
T Consensus 88 ~v~D~~tl~~--~~ti~~~~---~Gw--glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 88 FVYDLATLTP--RARFRYPG---EGW--ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-N 159 (243)
T ss_dssp EEEETTTTEE--EEEEECSS---CCC--EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEECCcCcE--EEEEeCCC---Cce--EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-C
Confidence 9999988664 11222222 123 33467778888878899999999998888777654332 234456665 6
Q ss_pred CcEEEEeCCCCcEEEEEcCCCceeeeecCC-------------CcceeEEEeecCCCEEEEcccc-eEEeeC
Q 026679 156 GQYVVSGSGDGTLHAWNINTRNEVACWNGN-------------IGVVACLKWAPRRAMFVAASSV-LSFWIP 213 (235)
Q Consensus 156 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~~-i~iw~~ 213 (235)
|+..+..-.+..|.+.|.++++.+..+... ......|+++|++..|...++. =++|.+
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v 231 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEI 231 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEE
Confidence 776666666789999999999988776421 1356899999988777777632 444544
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.35 E-value=1.1e-13 Score=104.54 Aligned_cols=183 Identities=14% Similarity=0.057 Sum_probs=100.0
Q ss_pred chhhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCC----ceEEEcCCCCEEEEEecCCe
Q 026679 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR----PTVAFDQQGLVFAVAMEAGA 77 (235)
Q Consensus 2 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~dg~ 77 (235)
.+|+.+..++. +.+.+..+..++..+++++.|+.|+.||.++++.+..+..+.. ....+. .+..+++++.++.
T Consensus 27 ~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~ 103 (369)
T 2hz6_A 27 RTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDI 103 (369)
T ss_dssp TTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEE
T ss_pred CCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCE
Confidence 35555555554 4555555566777888888999999999988887665543311 111111 3456788888999
Q ss_pred EEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC-
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG- 156 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 156 (235)
+..||..+++.. .....+. ...++|++..+++++.++.|+.||.++++....+.... .....++++.
T Consensus 104 v~a~D~~tG~~~----w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~----~~~~~~~~~~~ 171 (369)
T 2hz6_A 104 WYVIDLLTGEKQ----QTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD----YAASLPEDDVD 171 (369)
T ss_dssp EEEECCC------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE----ECCBCCCCCTT
T ss_pred EEEEECCCCcEE----EEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc----ccCccccCCcc
Confidence 999999987752 2221111 23456688889999999999999999998765554322 1223344432
Q ss_pred --cEEEEeCCCCcEEEEEcCCCceeeeecCCCcce-eEEEeecCCCE
Q 026679 157 --QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVV-ACLKWAPRRAM 200 (235)
Q Consensus 157 --~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~ 200 (235)
..+++++.+|.|+.||.++++.+-..... .++ ....+++++..
T Consensus 172 ~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 172 YKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREGLR 217 (369)
T ss_dssp CCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSSCE
T ss_pred ccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCceE
Confidence 45677888999999999999988776633 344 33455566653
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.33 E-value=3e-10 Score=86.29 Aligned_cols=186 Identities=11% Similarity=0.079 Sum_probs=125.8
Q ss_pred cCCCee-EEEeccceEEEEecCcc----eeeeeeecc------C---CceEEEcCCCCEEEEEecC------CeEEEEec
Q 026679 24 PVNDSF-MSGSLDHSVRIWDLRVN----ACQGILRLR------G---RPTVAFDQQGLVFAVAMEA------GAIKLFDS 83 (235)
Q Consensus 24 ~~~~~l-~s~~~d~~i~vwd~~~~----~~~~~~~~~------~---~~~~~~~~~~~~l~~~~~d------g~v~i~d~ 83 (235)
+++++| +++-.+++|.++|+.+. +..+++... + ...+...|+| +++++..+ |.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 667665 55667889999998755 555555311 1 1126788999 77766655 78999999
Q ss_pred cCCCCCCceeEeec--CCC-cceeEEEEccCCCeEEEec-------------------CCCcEEEEEcCCCceeeeeccC
Q 026679 84 RSYDKGPFDTFLVG--GDT-AEVCDIKFSNDGKSMLLTT-------------------TNNNIYVLDAYGGEKRCGFSLE 141 (235)
Q Consensus 84 ~~~~~~~~~~~~~~--~~~-~~v~~~~~~~~~~~l~~~~-------------------~d~~i~~~d~~~~~~~~~~~~~ 141 (235)
.+.+. ..... ... ..-..+.|+|+++.+++.. .+.+|.+||+.+++....+...
T Consensus 172 ~T~~v----~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 172 YSFEP----LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp TTCCE----EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred CCCeE----EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 88764 22222 111 2244688899999888874 3689999999998888777764
Q ss_pred CCCCcceeeEE--eCCCcEEEEeC------CCCcEEEEEcCCCce--eeee--cC----------------CCcceeEEE
Q 026679 142 PSPNTNTEATF--TPDGQYVVSGS------GDGTLHAWNINTRNE--VACW--NG----------------NIGVVACLK 193 (235)
Q Consensus 142 ~~~~~i~~~~~--~~~~~~l~~~~------~dg~i~v~d~~~~~~--~~~~--~~----------------~~~~v~~~~ 193 (235)
........+.| +|+++++++++ .+++|.+|....++. ...+ .. -...+..|.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 22223445555 99999988776 456787766654321 1110 00 024578899
Q ss_pred eecCCCEEEEcc---cceEEeeCC
Q 026679 194 WAPRRAMFVAAS---SVLSFWIPN 214 (235)
Q Consensus 194 ~~~~~~~l~~~~---~~i~iw~~~ 214 (235)
++||+++|.++. +.|.+|++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECS
T ss_pred ECCCCCEEEEEeCCCCEEEEEEec
Confidence 999999999986 779999985
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.32 E-value=4.4e-10 Score=79.46 Aligned_cols=179 Identities=10% Similarity=0.045 Sum_probs=124.4
Q ss_pred eeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCC-CEEEEEecCCeEEEEeccCCCCCCceeE
Q 026679 17 VISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQG-LVFAVAMEAGAIKLFDSRSYDKGPFDTF 94 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~-~~l~~~~~dg~v~i~d~~~~~~~~~~~~ 94 (235)
...+.|+. +.++.+.+.+|.|+++|+++++.+..+ ...... ..+.+++ +++...-.++.+.+||..+.+. ...+
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~--~~ti 132 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR--ERTT 132 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE--EEEE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE--EEEE
Confidence 36788873 567778888899999999999988887 544322 2233344 4444555689999999988664 1122
Q ss_pred eecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCC---cceeeEEeCCCcEEEEeCCCCcEEEE
Q 026679 95 LVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPN---TNTEATFTPDGQYVVSGSGDGTLHAW 171 (235)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i~v~ 171 (235)
.... .-..+ .++++.|+.+..++.|.++|..+.+....+....... .++.+.|. +|+..+..-.+..|.+.
T Consensus 133 ~~~~---eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 133 RYSG---EGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp ECSS---CCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred eCCC---ceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 2221 12233 3678888888889999999999998887776644332 34566776 77766666678899999
Q ss_pred EcCCCceeeeecCC-------------CcceeEEEeecCCCEEEEcc
Q 026679 172 NINTRNEVACWNGN-------------IGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 172 d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~ 205 (235)
|.++++.+..+... ......|+++|++..|...+
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999988776421 13568999999876666665
No 232
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.27 E-value=1.1e-09 Score=83.62 Aligned_cols=185 Identities=12% Similarity=0.078 Sum_probs=122.7
Q ss_pred cCCCeeEEEec-c----ceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEe----------cCCeEEEEeccCCCC
Q 026679 24 PVNDSFMSGSL-D----HSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAM----------EAGAIKLFDSRSYDK 88 (235)
Q Consensus 24 ~~~~~l~s~~~-d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~dg~v~i~d~~~~~~ 88 (235)
++++.++.... + +.|.++|..+++.+..+.....+-++++|+++.++++. .++.|.++|..+.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 46666665544 2 69999999999999999876666899999999888886 367899999988764
Q ss_pred CCceeEeecCC-----CcceeEEEEccCCCeEEEecC--CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC-cEEE
Q 026679 89 GPFDTFLVGGD-----TAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG-QYVV 160 (235)
Q Consensus 89 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 160 (235)
.....+.+. ......+.++|||++++++.. ++.|.++|+.+++.+..+..... ....|++ +.++
T Consensus 162 --v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~------~~~~p~g~~~~v 233 (426)
T 3c75_H 162 --IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC------YHIFPASPTVFY 233 (426)
T ss_dssp --EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE------EEEEEEETTEEE
T ss_pred --EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc------eeeccCCCcEEE
Confidence 112222200 123457899999999998864 57899999999998887765321 2333432 4445
Q ss_pred EeCCCCcEEEEEcCCCceee----eecCCCcc-eeEEEeecCCCEEEEcc--cceEEeeCCCC
Q 026679 161 SGSGDGTLHAWNINTRNEVA----CWNGNIGV-VACLKWAPRRAMFVAAS--SVLSFWIPNPS 216 (235)
Q Consensus 161 ~~~~dg~i~v~d~~~~~~~~----~~~~~~~~-v~~~~~~~~~~~l~~~~--~~i~iw~~~~~ 216 (235)
+.+.||.+.+.+..+++... .+.....+ ...+.+.+++..++..+ +.+.+.|....
T Consensus 234 ~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 234 MNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp EEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSS
T ss_pred EEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCC
Confidence 55567777777775554432 12111112 12356788776655444 77888887543
No 233
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.22 E-value=8.3e-08 Score=68.17 Aligned_cols=200 Identities=9% Similarity=0.068 Sum_probs=129.7
Q ss_pred hcccccceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeeccC---CceEEEcCCCCEEEEEecCCeEEEEeccC
Q 026679 10 FKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLRG---RPTVAFDQQGLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 10 ~~~h~~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 85 (235)
+.+-.+.+..++|+|+++.|+ +...++.|...|.. ++....+.... ...+++.+++.++++.-.++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 445556799999999876554 56778889999987 88777776543 22388888887767766778899998866
Q ss_pred CCCCC-ceeEee----cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCC---Cceeeee-----ccCCCCCcceeeEE
Q 026679 86 YDKGP-FDTFLV----GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG---GEKRCGF-----SLEPSPNTNTEATF 152 (235)
Q Consensus 86 ~~~~~-~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~---~~~~~~~-----~~~~~~~~i~~~~~ 152 (235)
..... .....+ .........++|+|+++.|+++.......+|.+.. ....... ........+..+++
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 44200 111111 12345578999999998888877765555555431 1111111 11112234688999
Q ss_pred eCC-CcEEEEeCCCCcEEEEEcCCCceeeeecCCC---------cceeEEEeecCCCEEEEcccc-eEEe
Q 026679 153 TPD-GQYVVSGSGDGTLHAWNINTRNEVACWNGNI---------GVVACLKWAPRRAMFVAASSV-LSFW 211 (235)
Q Consensus 153 ~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~~-i~iw 211 (235)
+|. +++++.......|.++|. +++.+..+.-.. .....|+|.++|++.+++-.+ ++.+
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f 249 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRF 249 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEE
T ss_pred cCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEE
Confidence 994 666777778888999996 466555543221 256899999999977776543 4444
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.22 E-value=1.7e-09 Score=87.92 Aligned_cols=190 Identities=13% Similarity=0.110 Sum_probs=129.1
Q ss_pred CCeeEEEec------cceEEEEecCcceeeeeeeccCC----------------------------------ceEEEcCC
Q 026679 26 NDSFMSGSL------DHSVRIWDLRVNACQGILRLRGR----------------------------------PTVAFDQQ 65 (235)
Q Consensus 26 ~~~l~s~~~------d~~i~vwd~~~~~~~~~~~~~~~----------------------------------~~~~~~~~ 65 (235)
+..++.++. ++.|+.+|.++++.+..+..... ..++++|+
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 345555543 79999999999998876654221 13688898
Q ss_pred CCEEEEEecCC-------------------eEEEEeccCCCCCCceeEeecCCC-------cceeEEEEccCC---CeEE
Q 026679 66 GLVFAVAMEAG-------------------AIKLFDSRSYDKGPFDTFLVGGDT-------AEVCDIKFSNDG---KSML 116 (235)
Q Consensus 66 ~~~l~~~~~dg-------------------~v~i~d~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~---~~l~ 116 (235)
+.+++.+..++ .|..+|..+++. ...+....|. .....+....+| ..++
T Consensus 254 ~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~--~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~ 331 (677)
T 1kb0_A 254 LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY--KWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVIL 331 (677)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE--EEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEE
T ss_pred CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE--EEEEecCCCcccccccCCCcEEEecccCCcEeeEEE
Confidence 88988887664 488899988764 2222222221 122223334467 6788
Q ss_pred EecCCCcEEEEEcCCCceeeeeccCCCC---------C------------------------cceeeEEeCCCcEEEEeC
Q 026679 117 LTTTNNNIYVLDAYGGEKRCGFSLEPSP---------N------------------------TNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 117 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~---------~------------------------~i~~~~~~~~~~~l~~~~ 163 (235)
.++.+|.++++|..+++.+..+...... . .-..++++|++.++++..
T Consensus 332 ~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 332 HAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPA 411 (677)
T ss_dssp ECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEE
T ss_pred EECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeC
Confidence 9999999999999999987655432110 0 012578999888887653
Q ss_pred C-------------------------------------------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCE
Q 026679 164 G-------------------------------------------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM 200 (235)
Q Consensus 164 ~-------------------------------------------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 200 (235)
. .|.|..||+.+++.+-.+. +..++....+...+..
T Consensus 412 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~ 490 (677)
T 1kb0_A 412 QNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNV 490 (677)
T ss_dssp EECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTE
T ss_pred hhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCE
Confidence 2 2789999999999887775 3344555566777777
Q ss_pred EEEcc--cceEEeeCCCCCC
Q 026679 201 FVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 201 l~~~~--~~i~iw~~~~~~~ 218 (235)
++.++ +.+++||.++++.
T Consensus 491 v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 491 VFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEEECTTSEEEEEETTTCCE
T ss_pred EEEECCCCcEEEEECCCCce
Confidence 77776 8899999987654
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.20 E-value=3e-09 Score=83.53 Aligned_cols=181 Identities=13% Similarity=0.064 Sum_probs=123.8
Q ss_pred CCCeeEEEec-cceEEEEecCcceeeeeeeccC---CceEEE-c-CCCCEEEEEe------------------cCCeEEE
Q 026679 25 VNDSFMSGSL-DHSVRIWDLRVNACQGILRLRG---RPTVAF-D-QQGLVFAVAM------------------EAGAIKL 80 (235)
Q Consensus 25 ~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~~---~~~~~~-~-~~~~~l~~~~------------------~dg~v~i 80 (235)
||++++.... +.+|.+.|+++.++...+.... ...+++ + |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7777766554 5679999999999888665433 223676 5 8999998885 2457899
Q ss_pred EeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCC--------------------------------------
Q 026679 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN-------------------------------------- 122 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------------------------------- 122 (235)
.|..+.+. .......+ ....++++|+|+++++.+.+.
T Consensus 180 ID~~t~~v--~~qI~Vgg---~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 180 VDADKWEV--AWQVLVSG---NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EETTTTEE--EEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EECCCCeE--EEEEEeCC---CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 99887543 12222222 345677999999988887543
Q ss_pred cEEEEEcCC--Cce-eeeeccCCCCCcceeeEEeCCCcEEEEeC-CCCcEEEEEcCCCc------------eeeeecCCC
Q 026679 123 NIYVLDAYG--GEK-RCGFSLEPSPNTNTEATFTPDGQYVVSGS-GDGTLHAWNINTRN------------EVACWNGNI 186 (235)
Q Consensus 123 ~i~~~d~~~--~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~v~d~~~~~------------~~~~~~~~~ 186 (235)
.|.+.|.++ ++. +..+.... ...++.++|||+++++++ .+..|.++|+.+.+ ....+. -.
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG 330 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LG 330 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CC
T ss_pred cEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CC
Confidence 377777776 433 33333222 246699999999886655 57899999998653 233333 23
Q ss_pred cceeEEEeecCCCEEEEcc---cceEEeeCCC
Q 026679 187 GVVACLKWAPRRAMFVAAS---SVLSFWIPNP 215 (235)
Q Consensus 187 ~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~ 215 (235)
.....++|+|+| ++.+.. +.+.+|+++.
T Consensus 331 ~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 331 LGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp SCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 467899999999 655553 7899999865
No 236
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.19 E-value=1.5e-08 Score=83.46 Aligned_cols=193 Identities=6% Similarity=0.001 Sum_probs=109.4
Q ss_pred ceeEEEee-cCCCeeEEEec-c----ceEEEEecCcc-eeee-eeeccCCceEEEcCCCCEEEEEecC-----CeEEEEe
Q 026679 16 RVISLCMS-PVNDSFMSGSL-D----HSVRIWDLRVN-ACQG-ILRLRGRPTVAFDQQGLVFAVAMEA-----GAIKLFD 82 (235)
Q Consensus 16 ~v~~~~~~-~~~~~l~s~~~-d----~~i~vwd~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d-----g~v~i~d 82 (235)
.+...+|| |||++||-+.. + ..|+++|+.++ +.+. .+.. ....++|+||++.|+....+ ..|..++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 67789999 99998775433 2 35999999988 6322 1211 12348899999888877765 2577778
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC---CCcEEEEEcCCCce-e--eeeccCCCCCcceeeEEeCCC
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT---NNNIYVLDAYGGEK-R--CGFSLEPSPNTNTEATFTPDG 156 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~-~--~~~~~~~~~~~i~~~~~~~~~ 156 (235)
+.+........+. .........+.|+|||++|+.... ...|+++|+.++.. . ..+. .........+.|+..+
T Consensus 254 lgt~~~~~~lv~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 254 MGKLQSEDVCLYE-EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR-PREKGVRYDVQMHGTS 331 (751)
T ss_dssp TTSCGGGCEEEEE-CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS-CCCTTCCEEEEEETTT
T ss_pred CCCCchhcEEEEe-cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee-cCCCCceEEEeeeeCC
Confidence 7664321111221 122334567899999999887653 44688999887521 1 2222 2222333444444344
Q ss_pred cEEEEeCCC----CcEEEEEcCCCceeee-ecCCCc--ceeEEEeecCCCEEEEcc---c--ceEEeeC
Q 026679 157 QYVVSGSGD----GTLHAWNINTRNEVAC-WNGNIG--VVACLKWAPRRAMFVAAS---S--VLSFWIP 213 (235)
Q Consensus 157 ~~l~~~~~d----g~i~v~d~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~l~~~~---~--~i~iw~~ 213 (235)
.+++....+ ..|..+|+.++..... +..+.. .+..+.+ .+..|+... + .+.++++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 444444433 3577777764322222 222333 3445554 455555443 3 3666665
No 237
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.16 E-value=1.4e-08 Score=75.15 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=121.3
Q ss_pred hhhhhhhcccccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCC--ceEEEcCCCCEEEEEecCCeEEEE
Q 026679 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 4 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~dg~v~i~ 81 (235)
++.+..+..+........+. +..+..++.++.+..+|.. ++.......... ..+...+++. ++.++.++.+..+
T Consensus 87 g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~ 162 (330)
T 3hxj_A 87 GTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAI 162 (330)
T ss_dssp GGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEE
T ss_pred CcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEE
Confidence 44444444433333333443 4567778888999999987 766655554332 2356666666 6667788999999
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 161 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (235)
|.. ++. ..........+.++...+++. +..++ +.|..+| .+++....+.... ..+.++...++|.+ ..
T Consensus 163 d~~-g~~----~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~--~~~~~~~~~~~g~l-~v 230 (330)
T 3hxj_A 163 NPD-GTE----KWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGY--WTVTRPAISEDGTI-YV 230 (330)
T ss_dssp CTT-SCE----EEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-TTSCEEEEECCSS--CCCSCCEECTTSCE-EE
T ss_pred CCC-CCE----eEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEEEEEccCC--cceeceEECCCCeE-EE
Confidence 987 432 222223344566677777776 44555 7899999 6776665544332 44778888888764 44
Q ss_pred eCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCC
Q 026679 162 GSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPN 214 (235)
Q Consensus 162 ~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~ 214 (235)
++.++.|..+|. +++.+..+......+..+...+++.+.+... +.+..++.+
T Consensus 231 ~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~ 283 (330)
T 3hxj_A 231 TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPD 283 (330)
T ss_dssp EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECTT
T ss_pred EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECCC
Confidence 556777888874 6666666554444455666776777666655 578888864
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.16 E-value=6.3e-09 Score=77.07 Aligned_cols=187 Identities=12% Similarity=0.135 Sum_probs=121.9
Q ss_pred cccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC--CceEEEcCCCCEEEEEecCCeEEEEeccCCCCCC
Q 026679 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGP 90 (235)
Q Consensus 13 h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~ 90 (235)
+...+.++...+++. +..++.++.|..+|.. ++....+.... ...+...+++.+++. + +.+..+| .+++.
T Consensus 135 ~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~-- 206 (330)
T 3hxj_A 135 KKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTE-- 206 (330)
T ss_dssp SSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCE--
T ss_pred CCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcE--
Confidence 334455566665555 6667778999999988 77666655433 233666677775544 4 7889998 44332
Q ss_pred ceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEE
Q 026679 91 FDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170 (235)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 170 (235)
..........+.++...++|. +.+++.++.+..+|. +++....+.... ..+..+.+.+++ .|..++.+|.|..
T Consensus 207 --~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~--~~~~~~~~~~~g-~l~v~t~~ggl~~ 279 (330)
T 3hxj_A 207 --KWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGK--RIESSPVIGNTD-TIYFGSYDGHLYA 279 (330)
T ss_dssp --EEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSS--CCCSCCEECTTS-CEEEECTTCEEEE
T ss_pred --EEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCC--CccccceEcCCC-eEEEecCCCCEEE
Confidence 333333345677888888775 666777888988984 555554444332 224445666566 4667777888999
Q ss_pred EEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCC
Q 026679 171 WNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNP 215 (235)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~ 215 (235)
+|. +++.+..+......+.++...+++.+.+.+. |.+++...+.
T Consensus 280 ~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 280 INP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLE 324 (330)
T ss_dssp ECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC--
T ss_pred ECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEeccc
Confidence 995 7777766665556677888888888777666 7787776544
No 239
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=1.1e-08 Score=83.14 Aligned_cols=181 Identities=14% Similarity=0.087 Sum_probs=125.4
Q ss_pred eEEEeecCCCeeEEEeccc-------------------eEEEEecCcceeeeeeeccCC----------ce-EEEcCCC-
Q 026679 18 ISLCMSPVNDSFMSGSLDH-------------------SVRIWDLRVNACQGILRLRGR----------PT-VAFDQQG- 66 (235)
Q Consensus 18 ~~~~~~~~~~~l~s~~~d~-------------------~i~vwd~~~~~~~~~~~~~~~----------~~-~~~~~~~- 66 (235)
..++++|++..++.+..++ .|..+|.++++.+..++.... ++ +....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 4678889888888877664 599999999998887765321 22 3333467
Q ss_pred --CEEEEEecCCeEEEEeccCCCCCCceeEeecC---------CCcce------------------------eEEEEccC
Q 026679 67 --LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG---------DTAEV------------------------CDIKFSND 111 (235)
Q Consensus 67 --~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~---------~~~~v------------------------~~~~~~~~ 111 (235)
..++.++.+|.++++|..+++... ...... ...++ ..++++|+
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~--~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~ 403 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFIS--AKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ 403 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEE--EEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEec--cccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence 678999999999999998876411 111100 00001 15688898
Q ss_pred CCeEEEecC-------------------------------------------CCcEEEEEcCCCceeeeeccCCCCCcce
Q 026679 112 GKSMLLTTT-------------------------------------------NNNIYVLDAYGGEKRCGFSLEPSPNTNT 148 (235)
Q Consensus 112 ~~~l~~~~~-------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~i~ 148 (235)
+..+++... .+.|..||+.+++.+-.+.... +..
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~---~~~ 480 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS---PWN 480 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS---SCC
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC---CCc
Confidence 887776532 2779999999999877665432 244
Q ss_pred eeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCC-cceeEEEeecCCCEEEE
Q 026679 149 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI-GVVACLKWAPRRAMFVA 203 (235)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~ 203 (235)
...+...+..++.++.||.+++||.++++.+..+.... ..-.-+.|.++|+.+++
T Consensus 481 ~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 481 GGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 45677788889999999999999999999998886433 22334566678864443
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.14 E-value=1.2e-08 Score=83.11 Aligned_cols=181 Identities=13% Similarity=0.146 Sum_probs=121.8
Q ss_pred cceEEEEecCcceeeeeeeccC---------------------------------CceEEEcCCCCEEEEEecCCe----
Q 026679 35 DHSVRIWDLRVNACQGILRLRG---------------------------------RPTVAFDQQGLVFAVAMEAGA---- 77 (235)
Q Consensus 35 d~~i~vwd~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~l~~~~~dg~---- 77 (235)
++.|+.||.++++.+..+.... -..++++|+..+++++..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 7899999999999877665210 013788888899999887764
Q ss_pred ---------------EEEEeccCCCCCCceeEeecCCC-------cceeEEEEccCCC---eEEEecCCCcEEEEEcCCC
Q 026679 78 ---------------IKLFDSRSYDKGPFDTFLVGGDT-------AEVCDIKFSNDGK---SMLLTTTNNNIYVLDAYGG 132 (235)
Q Consensus 78 ---------------v~i~d~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~~~d~~~~ 132 (235)
|..+|..+++. ...+....|. .+........+|+ .++.++.+|.++++|.+++
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~--~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEY--VWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCE--EEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred CCCCCCCCCceeeeeEEEEEccCCce--eEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC
Confidence 99999998774 1222222221 1222222233554 7888999999999999999
Q ss_pred ceeeeeccCCC-------------------------------------CCcceeeEEeCCCcEEEEeCC-----------
Q 026679 133 EKRCGFSLEPS-------------------------------------PNTNTEATFTPDGQYVVSGSG----------- 164 (235)
Q Consensus 133 ~~~~~~~~~~~-------------------------------------~~~i~~~~~~~~~~~l~~~~~----------- 164 (235)
+.+........ ...-..++|+|+..++++...
T Consensus 340 ~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 419 (689)
T 1yiq_A 340 ELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPE 419 (689)
T ss_dssp CEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSS
T ss_pred CEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccc
Confidence 88743322110 001123789998887776521
Q ss_pred ----------------------------------CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cce
Q 026679 165 ----------------------------------DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 208 (235)
Q Consensus 165 ----------------------------------dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i 208 (235)
+|.|+.||+.+++.+-.+..+ .+...-.+...+.+++.++ +.+
T Consensus 420 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l 498 (689)
T 1yiq_A 420 APKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRV 498 (689)
T ss_dssp CCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEE
T ss_pred cccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC-CCccCccceECCCEEEEECCCCcE
Confidence 377999999999988777644 3334445666777777776 789
Q ss_pred EEeeCCCCCC
Q 026679 209 SFWIPNPSSN 218 (235)
Q Consensus 209 ~iw~~~~~~~ 218 (235)
+.||.++++.
T Consensus 499 ~a~D~~tG~~ 508 (689)
T 1yiq_A 499 IAYAADTGEK 508 (689)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcc
Confidence 9999987754
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.13 E-value=1.8e-08 Score=82.22 Aligned_cols=182 Identities=13% Similarity=0.133 Sum_probs=123.5
Q ss_pred EEEeecCCCeeEEEeccce-------------------EEEEecCcceeeeeeeccCC---------c-e-EEEcCCCC-
Q 026679 19 SLCMSPVNDSFMSGSLDHS-------------------VRIWDLRVNACQGILRLRGR---------P-T-VAFDQQGL- 67 (235)
Q Consensus 19 ~~~~~~~~~~l~s~~~d~~-------------------i~vwd~~~~~~~~~~~~~~~---------~-~-~~~~~~~~- 67 (235)
.++++|++.+++.+..++. |..+|.++++.+..++.... . + .....+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 6788888888888887764 99999999998887765311 1 1 22223554
Q ss_pred --EEEEEecCCeEEEEeccCCCCCCce-------eEee-----------------cCCC-----------cceeEEEEcc
Q 026679 68 --VFAVAMEAGAIKLFDSRSYDKGPFD-------TFLV-----------------GGDT-----------AEVCDIKFSN 110 (235)
Q Consensus 68 --~l~~~~~dg~v~i~d~~~~~~~~~~-------~~~~-----------------~~~~-----------~~v~~~~~~~ 110 (235)
.++.++.+|.++++|.++++..... .... .... ..-..++++|
T Consensus 319 ~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp 398 (689)
T 1yiq_A 319 RKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP 398 (689)
T ss_dssp EEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC
Confidence 7888999999999999887641000 0000 0000 0011367888
Q ss_pred CCCeEEEecC---------------------------------------------CCcEEEEEcCCCceeeeeccCCCCC
Q 026679 111 DGKSMLLTTT---------------------------------------------NNNIYVLDAYGGEKRCGFSLEPSPN 145 (235)
Q Consensus 111 ~~~~l~~~~~---------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~ 145 (235)
+...+++... +|.|..||+.+++.+-.+....
T Consensus 399 ~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~--- 475 (689)
T 1yiq_A 399 DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT--- 475 (689)
T ss_dssp TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS---
T ss_pred CCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC---
Confidence 8777766421 3779999999999887766543
Q ss_pred cceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCc-ceeEEEeecCCCEEEE
Q 026679 146 TNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVA 203 (235)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~ 203 (235)
+.....+...+.+++.++.||.++.||.++|+.+..++...+ .-.-+.|..+|+..++
T Consensus 476 ~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 476 IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 233346667788999999999999999999999988864432 2234667788875443
No 242
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.11 E-value=9.1e-10 Score=82.72 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=67.3
Q ss_pred EEEccCCCeEEEecC-C--------CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcE-EEEeC-CCCcEEEEEcC
Q 026679 106 IKFSNDGKSMLLTTT-N--------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQY-VVSGS-GDGTLHAWNIN 174 (235)
Q Consensus 106 ~~~~~~~~~l~~~~~-d--------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~-~dg~i~v~d~~ 174 (235)
++++|+++.++++.. . +.+.++|+.+.+.+..+.... ....++|+|||++ +++.. .++.|.++|+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 689999998887643 2 356799999999888776553 3688999999984 55555 58999999999
Q ss_pred CCceeeeecCCCcceeEEEeec
Q 026679 175 TRNEVACWNGNIGVVACLKWAP 196 (235)
Q Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~ 196 (235)
+++.+.++... .....+++.+
T Consensus 346 t~kvv~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 346 SDQDQSSVELD-KGPESLSVQN 366 (368)
T ss_dssp SCEEEEECCCC-SCCCEEECCC
T ss_pred CCcEEEEEECC-CCCCEEEeec
Confidence 99999988755 3456676654
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.09 E-value=5.4e-08 Score=72.08 Aligned_cols=185 Identities=10% Similarity=0.056 Sum_probs=112.7
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec---------------------cCCceEEEcCCCCEEEEEec
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL---------------------RGRPTVAFDQQGLVFAVAME 74 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~ 74 (235)
...+++|.+++++++++..++.|..||..++........ .....+++.+++..|+++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 456788999988788888899999999876543321110 11223888873344555555
Q ss_pred CCeEEEEeccCCCCCCceeEeecC-CCcceeEEEEcc-CCCeEEEecC-----------------CCcEEEEEcCCCcee
Q 026679 75 AGAIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSN-DGKSMLLTTT-----------------NNNIYVLDAYGGEKR 135 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~~~d~~~~~~~ 135 (235)
.+.+..+|..+...... .....+ .......+++.+ +|+..++... ++.|..||..+++..
T Consensus 100 ~~~i~~~d~~~g~~~~~-~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YYHLSVVGSEGGHATQL-ATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTEEEEECTTCEECEEE-ESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCEEEEeCCCCEEEEe-cccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 55688888664322110 000111 113467899999 8876665432 367999998766543
Q ss_pred eeeccCCCCCcceeeEEeCCCcEEEEe-CCCCcEEEEEcCCCc--eeeeecCCCcceeEEEeecCCCEEEEcc
Q 026679 136 CGFSLEPSPNTNTEATFTPDGQYVVSG-SGDGTLHAWNINTRN--EVACWNGNIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~v~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 205 (235)
.....- .....++++|+++.|+.+ ...+.|.+|++.... ....+....+ ...+++.++|++.++..
T Consensus 179 ~~~~~~---~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 179 LLLKEL---HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEEEE---SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred EeccCC---ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 222111 224669999999866555 566889999986421 1111111223 78899999998777653
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.09 E-value=6.2e-07 Score=64.47 Aligned_cols=194 Identities=12% Similarity=0.049 Sum_probs=118.4
Q ss_pred cceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeecc--CCceEEEcCCCCEEEEE-ecCCeEEEEeccCCCCCC
Q 026679 15 ERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLR--GRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGP 90 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~ 90 (235)
.....++|+++++.|+ +-...+.|..++.........+... ....+++++++..++.+ ...+.|.++++.....
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-- 113 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-- 113 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--
Confidence 3467899999765555 4445789999998765443333222 22348999976555544 4578999999865332
Q ss_pred ceeEeecCCCcceeEEEEccCCCeEEEecC---CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEE-EEeCCCC
Q 026679 91 FDTFLVGGDTAEVCDIKFSNDGKSMLLTTT---NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV-VSGSGDG 166 (235)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg 166 (235)
.............++++|++..|+.+.. .+.|..+++.... ...+. .........++++|++..| ++-...+
T Consensus 114 --~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~-~~~~~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 114 --RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILA-QDNLGLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp --EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEE-CTTCSCEEEEEEETTTTEEEEEETTTT
T ss_pred --EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEE-ECCCCCCcEEEEcCCCCEEEEEECCCC
Confidence 1112222245688999997666655553 3688888875432 22221 1122346889999987665 4555678
Q ss_pred cEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCC
Q 026679 167 TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSS 217 (235)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~ 217 (235)
.|.++|.........+.. ......++.. +..|..+. +.|.+++.++.+
T Consensus 190 ~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCC
Confidence 899999865443333332 2334566654 44444443 668888887553
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=3.9e-07 Score=65.54 Aligned_cols=182 Identities=13% Similarity=0.117 Sum_probs=110.1
Q ss_pred CeeEEEeccceEEEEecCcceee-----eeeec--cCCceEEEcCCCCEEEEE-ecCCeEEEEeccCCCCCCceeEeecC
Q 026679 27 DSFMSGSLDHSVRIWDLRVNACQ-----GILRL--RGRPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGG 98 (235)
Q Consensus 27 ~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~--~~~~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~ 98 (235)
.+|+.+.. +.|+.++++..... ..+.. .....+++++++..|+.+ ...+.|..++...... ......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~~ 76 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP----TTIIRQ 76 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC----EEEECT
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc----EEEEEC
Confidence 34554443 47888888654321 11221 122348999966555554 4578999999876432 222222
Q ss_pred CCcceeEEEEccCCCeEEEe-cCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC---CCcEEEEEcC
Q 026679 99 DTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG---DGTLHAWNIN 174 (235)
Q Consensus 99 ~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~v~d~~ 174 (235)
.......++++|++..|+.+ ...+.|.++++.......... ........++++|++..|+.+.. .+.|..+++.
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD--TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE--CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 22467889999976555544 457889999986543222221 11234688999996555544433 4688888875
Q ss_pred CCceeeeec-CCCcceeEEEeecCCCEEEEcc---cceEEeeCCCC
Q 026679 175 TRNEVACWN-GNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPS 216 (235)
Q Consensus 175 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~ 216 (235)
+.....+. ........++++|++..|..+. +.|.++++++.
T Consensus 155 -g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 155 -GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp -SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred -CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 33333322 2234678999999887776665 56888888654
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.06 E-value=6e-08 Score=73.32 Aligned_cols=182 Identities=9% Similarity=0.050 Sum_probs=113.1
Q ss_pred CCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcc
Q 026679 25 VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAE 102 (235)
Q Consensus 25 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~ 102 (235)
++..++.++.++.|..+|.++++.+.......... ... .+..+++++.++.+..+|..+++. ..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~----~W~~~~~~~~ 175 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAV----KWTVNLDMPS 175 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCE----EEEEECCC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcE----EEEEeCCCCc
Confidence 35678888889999999999999887766543221 222 245788888999999999988764 2221111110
Q ss_pred e-----eEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCc-----ceeeEEeC--CCcEEEEeCCCCcEEE
Q 026679 103 V-----CDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNT-----NTEATFTP--DGQYVVSGSGDGTLHA 170 (235)
Q Consensus 103 v-----~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-----i~~~~~~~--~~~~l~~~~~dg~i~v 170 (235)
. ..... .+..+++++.++.+..+|..+++............. +..+.-.| .+..++.++.++.+..
T Consensus 176 ~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~ 253 (376)
T 3q7m_A 176 LSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA 253 (376)
T ss_dssp ---CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEE
T ss_pred eeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE
Confidence 0 11122 245688888899999999999988766654321100 00011111 3457777888999999
Q ss_pred EEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCCC
Q 026679 171 WNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSS 217 (235)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~~ 217 (235)
+|.++++.+..... .....+... ++..++... +.+..+|.++++
T Consensus 254 ~d~~tG~~~w~~~~--~~~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 254 LDLRSGQIMWKREL--GSVNDFIVD-GNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp EETTTCCEEEEECC--CCEEEEEEE-TTEEEEEETTCCEEEEETTTCC
T ss_pred EECCCCcEEeeccC--CCCCCceEE-CCEEEEEcCCCeEEEEECCCCc
Confidence 99999988766542 233444443 333333333 778888887654
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.01 E-value=1.9e-07 Score=69.16 Aligned_cols=192 Identities=14% Similarity=0.112 Sum_probs=114.0
Q ss_pred ceeEEEeec-CCCeeEEEeccceEEEEecCcceeeeeeec------cCCceEEEcC-CCCEEEEEec-------------
Q 026679 16 RVISLCMSP-VNDSFMSGSLDHSVRIWDLRVNACQGILRL------RGRPTVAFDQ-QGLVFAVAME------------- 74 (235)
Q Consensus 16 ~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~------~~~~~~~~~~-~~~~l~~~~~------------- 74 (235)
....+++.+ +++ |+.+...+.|..+|..++........ .....+++.+ +|+++++...
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHH
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehc
Confidence 468899997 554 55554445588888765543222111 1122388999 8887666432
Q ss_pred ----CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEe-cCCCcEEEEEcCCCc--eeeeeccCCCCCcc
Q 026679 75 ----AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYGGE--KRCGFSLEPSPNTN 147 (235)
Q Consensus 75 ----dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~--~~~~~~~~~~~~~i 147 (235)
++.+..+|..+.+. . ...........++++|+++.|+.+ ...+.|..|++.... ....+. . ..+ .
T Consensus 160 ~~~~~g~v~~~d~~~~~~----~-~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~-~~g-P 231 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKET----T-LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-K-IPN-P 231 (322)
T ss_dssp HTCCCEEEEEEETTTTEE----E-EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-E-CSS-E
T ss_pred ccCCCceEEEEeCCCCEE----E-EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-e-CCC-C
Confidence 36788888765432 1 111111345678999999866655 556899999987531 111111 1 113 6
Q ss_pred eeeEEeCCCcEEEEeCC----------CCcEEEEEcCCCceeeeecCCC----cceeEEEeecCCCEEEEcc--cceEEe
Q 026679 148 TEATFTPDGQYVVSGSG----------DGTLHAWNINTRNEVACWNGNI----GVVACLKWAPRRAMFVAAS--SVLSFW 211 (235)
Q Consensus 148 ~~~~~~~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~--~~i~iw 211 (235)
..++++++|++.++... .+.|..+|. .++.+..+.... ..+..+.+ .+++++++.. +.|..+
T Consensus 232 ~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEE
T ss_pred CCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEE
Confidence 77999999987666544 466888886 577766665332 34667766 4566655543 668888
Q ss_pred eCCCCCC
Q 026679 212 IPNPSSN 218 (235)
Q Consensus 212 ~~~~~~~ 218 (235)
+++....
T Consensus 310 ~~~~~~~ 316 (322)
T 2fp8_A 310 VYDKKGN 316 (322)
T ss_dssp EC-----
T ss_pred ecccccC
Confidence 8765433
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.00 E-value=3e-07 Score=69.52 Aligned_cols=183 Identities=10% Similarity=0.034 Sum_probs=112.7
Q ss_pred CCeeEEEeccceEEEEecCcceeeeeeeccCC----------ceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEe
Q 026679 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGR----------PTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL 95 (235)
Q Consensus 26 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 95 (235)
+..++.++.++.|..+|.++++.+........ .......++..+++++.++.+..+|..+++. ...
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~----~W~ 128 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTV----AWQ 128 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCE----EEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCE----EEE
Confidence 56788888899999999999988877665321 1122223566788888999999999988764 222
Q ss_pred ecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCC---cceeeEEeCCCcEEEEeCCCCcEEEEE
Q 026679 96 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPN---TNTEATFTPDGQYVVSGSGDGTLHAWN 172 (235)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~dg~i~v~d 172 (235)
............. .+..+++++.++.|..+|..+++....+....... ........ +..++.++.++.+..+|
T Consensus 129 ~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 129 TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence 2111111111122 24468888899999999999998877665432210 00122222 45678888899999999
Q ss_pred cCCCceeeeecCCCc-------c---e-eEEEeecCCCEEEEcc-cceEEeeCCCCC
Q 026679 173 INTRNEVACWNGNIG-------V---V-ACLKWAPRRAMFVAAS-SVLSFWIPNPSS 217 (235)
Q Consensus 173 ~~~~~~~~~~~~~~~-------~---v-~~~~~~~~~~~l~~~~-~~i~iw~~~~~~ 217 (235)
..+++.+........ . + ..... .++..++.+. +.+..+|.++++
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~~~~~g~l~~~d~~tG~ 260 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFALAYNGNLTALDLRSGQ 260 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEE-ETTEEEEECTTSCEEEEETTTCC
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEEEecCcEEEEEECCCCc
Confidence 999988766542210 0 1 11111 1344444332 778888876554
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.99 E-value=2.3e-07 Score=66.26 Aligned_cols=162 Identities=7% Similarity=0.020 Sum_probs=106.4
Q ss_pred eeeeeeeccCC---ceEEEcCCCCEEEEEec--CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEE-ecC
Q 026679 47 ACQGILRLRGR---PTVAFDQQGLVFAVAME--AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL-TTT 120 (235)
Q Consensus 47 ~~~~~~~~~~~---~~~~~~~~~~~l~~~~~--dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~ 120 (235)
+.+..+..... .-+++++++.++++.+. ++.|.++|+.+++. .....+..+ .....+++. ++.|+. .-.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v--~~~i~l~~~-~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKV--ENIHKMDDS-YFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCE--EEEEECCTT-CCEEEEEEE--TTEEEEEETT
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE--EEEEecCCC-cceEEEEEe--CCEEEEEEec
Confidence 44555554433 23899998755555443 57999999998764 112222222 122344554 445554 445
Q ss_pred CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCC--c---ceeEEEee
Q 026679 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI--G---VVACLKWA 195 (235)
Q Consensus 121 d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~---~v~~~~~~ 195 (235)
++.+.++|..+.+.+..+... .+ ....+++||+.|+++..++.|.++|..+.+.+..+.... . .+..+.|.
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g-~~---~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQ-MK---DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECC-SS---SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECC-CC---CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 889999999999988887654 11 124577788877777778999999999988887775321 1 35678888
Q ss_pred cCCCEEEEcc--cceEEeeCCCCCC
Q 026679 196 PRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 196 ~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
++...+... +.|.+.|..+.+.
T Consensus 161 -dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 161 -NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp -TTEEEEEETTSSEEEEEETTTCCE
T ss_pred -CCEEEEecCCCCeEEEEECCCCcE
Confidence 675554442 7799999987654
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.92 E-value=5.7e-07 Score=63.70 Aligned_cols=159 Identities=13% Similarity=0.092 Sum_probs=104.4
Q ss_pred eeeeeeccCCc---eEEEcCCCCEEEEEecCC--eEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEec-CC
Q 026679 48 CQGILRLRGRP---TVAFDQQGLVFAVAMEAG--AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TN 121 (235)
Q Consensus 48 ~~~~~~~~~~~---~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d 121 (235)
.+..+...... -+.|+ ++.++.+.+.+| .|+.+|+.+++. ...... ..........++++.|+... .+
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv----~~~~~l-~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT----LQQIEL-GKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE----EEEEEC-CTTCCEEEEEEETTEEEEEESSS
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE----EEEEec-CCccceeEEEEeCCEEEEEEeeC
Confidence 45555444433 27887 677777777766 899999998774 222211 12233322333455555554 58
Q ss_pred CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCC--Ccc---eeEEEeec
Q 026679 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN--IGV---VACLKWAP 196 (235)
Q Consensus 122 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~---v~~~~~~~ 196 (235)
+.+.+||..+.+.+..+..... ...++++++.|+.+..++.|.++|..+.+.+..+... ..+ +..+.|.
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~e-----G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~- 180 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGE-----GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV- 180 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSC-----CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-
T ss_pred CEEEEEECccCcEEEEEECCCC-----ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-
Confidence 8999999999999988887542 2345567888877777888999999999888777542 223 3457776
Q ss_pred CCCEEEEcc--cceEEeeCCCCCC
Q 026679 197 RRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 197 ~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
+|+..+..- +.|.+.|.++++.
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBE
T ss_pred CCEEEEEEccCCeEEEEECCCCcE
Confidence 666554442 6688888877654
No 251
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.92 E-value=2.5e-06 Score=62.69 Aligned_cols=194 Identities=12% Similarity=0.078 Sum_probs=114.2
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCc-eEEEcCCCCEEEEEecCC--eEEEEeccCCCCCCc
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVFAVAMEAG--AIKLFDSRSYDKGPF 91 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~~~ 91 (235)
.....++|+++++++++-...+.|..||.... ....+.....+ .+++.++++++++..... .+..+|..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~--- 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV--- 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE---
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE---
Confidence 45678999999887777667889999997653 33333333333 389999999666554332 466667655442
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCce-eeee-------ccCCCCCcceeeEEeCCCcEEE-Ee
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK-RCGF-------SLEPSPNTNTEATFTPDGQYVV-SG 162 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~-------~~~~~~~~i~~~~~~~~~~~l~-~~ 162 (235)
..............++..+++..+++-..++.|+.+|...++. +... ...........+ +|+++.|+ +-
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 1111111122334455555555455544688999999865421 1100 001111223444 88887665 44
Q ss_pred CCCCcEEEEEcCC-Cce--eeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCCC
Q 026679 163 SGDGTLHAWNINT-RNE--VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 163 ~~dg~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~ 215 (235)
...+.|.+|++.. ++. ...+. .......++++++|+++++.. +.|.+++.+.
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred CCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCC
Confidence 5678899999864 322 11111 113467899999998776664 6688888764
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.91 E-value=4e-06 Score=62.80 Aligned_cols=196 Identities=9% Similarity=-0.004 Sum_probs=117.4
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEE-ecCCeEEEEeccCCCCCCce
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFD 92 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~ 92 (235)
..-+|.+..++ .+|+.+ ....|+..++..............+. ++|++.+..|+.. ...+.|..+++.....
T Consensus 34 d~~~C~~~~~~-~~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~---- 107 (349)
T 3v64_C 34 DRRSCKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV---- 107 (349)
T ss_dssp TSSCEEESSSC-CEEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----
T ss_pred CCCcccccccC-ceeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc----
Confidence 34456655553 334333 34568888876655444443333333 8999766555554 4678899998876542
Q ss_pred eEeecCCCcceeEEEEccCCCeE-EEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEE-EeCCC-CcEE
Q 026679 93 TFLVGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV-SGSGD-GTLH 169 (235)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d-g~i~ 169 (235)
.............+++.+.+..| ++-...+.|.+.++......... .........++++|.+..|+ +-... +.|.
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~--~~~l~~P~~iavdp~~g~ly~td~~~~~~I~ 185 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL--WQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 185 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE--CTTCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE--eCCCCCcceEEEecCcCeEEEeccCCCCEEE
Confidence 22222222345678898755444 55555788999998654332222 22223468899999655554 44444 7899
Q ss_pred EEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCCC
Q 026679 170 AWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 170 v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~ 218 (235)
.+++............-.....|+++|++..|..+. +.|..+++++...
T Consensus 186 r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 186 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp EEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 998754332222222334578999999877777665 5688888876543
No 253
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.90 E-value=6e-06 Score=60.94 Aligned_cols=181 Identities=9% Similarity=-0.005 Sum_probs=109.0
Q ss_pred ceEEEEecCcceeeeeeeccCCc-eEEEcCCCCEEEE-EecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCC
Q 026679 36 HSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVFAV-AMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGK 113 (235)
Q Consensus 36 ~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~-~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 113 (235)
..|+..|+...+....+.....+ .++|++.+..|+. -...+.|..+++......................+++.+.+.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 46888998877655555433333 3899986655554 455689999998752100011112222223457889987555
Q ss_pred eE-EEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC-C-CcEEEEEcCCCceeeee-cCCCcce
Q 026679 114 SM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-D-GTLHAWNINTRNEVACW-NGNIGVV 189 (235)
Q Consensus 114 ~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~v~d~~~~~~~~~~-~~~~~~v 189 (235)
.| ++-...+.|.++++........... .......++++|.+..|+.+.. . +.|..+++. +.....+ ...-...
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~--~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P 166 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWP 166 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEEC--CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCc
Confidence 45 4446678999999865433322221 2234688999996665554433 3 688888874 4433333 2233467
Q ss_pred eEEEeecCCCEEEEcc---cceEEeeCCCCCCC
Q 026679 190 ACLKWAPRRAMFVAAS---SVLSFWIPNPSSNS 219 (235)
Q Consensus 190 ~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~~ 219 (235)
..|+++|++..|..++ +.|..+++++....
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 199 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEecCCCceE
Confidence 8999999887777665 56888888765443
No 254
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.88 E-value=1.2e-06 Score=64.35 Aligned_cols=184 Identities=10% Similarity=0.004 Sum_probs=107.6
Q ss_pred cceeEEEeecCCCeeEEEecc-c-eEEEEecCcceeeeeeeccCC---ceEEEcCCCCEEEEEecCCeEEEEeccCCCCC
Q 026679 15 ERVISLCMSPVNDSFMSGSLD-H-SVRIWDLRVNACQGILRLRGR---PTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG 89 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d-~-~i~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 89 (235)
.....+++.++|+++++.... + .|..+|..+++.......... ..++..+++..+++-..++.|..+|.......
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 357789999999865554332 2 466677777765443332221 11444455544444445888888887643110
Q ss_pred CceeE-------eecCCCcceeEEEEccCCCeEEEe-cCCCcEEEEEcCC-Cce--eeeeccCCCCCcceeeEEeCCCcE
Q 026679 90 PFDTF-------LVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYG-GEK--RCGFSLEPSPNTNTEATFTPDGQY 158 (235)
Q Consensus 90 ~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~-~~~--~~~~~~~~~~~~i~~~~~~~~~~~ 158 (235)
.... .....-.....+ +|+++.|+.+ ...+.|..|++.. ++. ...+... .....++++++|++
T Consensus 152 -v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 152 -IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNL 225 (306)
T ss_dssp -EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCE
T ss_pred -EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCE
Confidence 0000 000111234445 7888766555 4578899999874 322 1111111 23566999999998
Q ss_pred EEEeCCCCcEEEEEcCCCceee--eecCCCcceeEEEee---cCCCEEEEcc
Q 026679 159 VVSGSGDGTLHAWNINTRNEVA--CWNGNIGVVACLKWA---PRRAMFVAAS 205 (235)
Q Consensus 159 l~~~~~dg~i~v~d~~~~~~~~--~~~~~~~~v~~~~~~---~~~~~l~~~~ 205 (235)
+++....+.|.++|.. ++... .+......+++++|. |++..|..++
T Consensus 226 ~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 226 YGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp EEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred EEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 8777778899999974 65522 333333568999998 8877666554
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.87 E-value=6.9e-07 Score=63.31 Aligned_cols=159 Identities=12% Similarity=0.015 Sum_probs=104.7
Q ss_pred eeeeeeeccCCc---eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEE-ecCCC
Q 026679 47 ACQGILRLRGRP---TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL-TTTNN 122 (235)
Q Consensus 47 ~~~~~~~~~~~~---~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~ 122 (235)
+.+..+...... -+.|+ ++.++.+.+.+|.|+.+|+.+++... .. +.. ....-.+++ +++.|+. .-.++
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~--~~-l~~-~~FgeGit~--~g~~Ly~ltw~~~ 116 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVW--ME-RLG-NIFAEGLAS--DGERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSE--EE-ECT-TCCEEEEEE--CSSCEEEEESSSC
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEe--EE-CCC-CcceeEEEE--eCCEEEEEEccCC
Confidence 345555444433 27776 46677777888999999999987522 22 322 111123444 4444444 44688
Q ss_pred cEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecC--CCc---ceeEEEeecC
Q 026679 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG--NIG---VVACLKWAPR 197 (235)
Q Consensus 123 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~---~v~~~~~~~~ 197 (235)
.+.+||..+.+.+..+...... ..++++++.|+.+..++.|.++|..+.+.+..+.. +.. .+..+.|. +
T Consensus 117 ~v~V~D~~Tl~~~~ti~~~~eG-----wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 117 LLFTWSGMPPQRERTTRYSGEG-----WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp EEEEEETTTTEEEEEEECSSCC-----CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEEEECCcCcEEEEEeCCCce-----eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 9999999999999888875331 34446788887777789999999999988877753 222 34567777 6
Q ss_pred CCEEEEcc--cceEEeeCCCCCC
Q 026679 198 RAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 198 ~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
|+..+..- +.|.+.|.++++.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBE
T ss_pred CEEEEEECCCCeEEEEeCCCCcE
Confidence 65554442 6688888877654
No 256
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.84 E-value=8e-06 Score=62.34 Aligned_cols=191 Identities=9% Similarity=-0.030 Sum_probs=115.4
Q ss_pred eeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEE-ecCCeEEEEeccCCCCCCceeEeecCCCcceeE
Q 026679 28 SFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCD 105 (235)
Q Consensus 28 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~ 105 (235)
+|+.+ ....|+..++................ ++|++.+..|+.. ...+.|+.+++......................
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEe-ccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 34433 34678888887665554444333333 8999866555555 457889888886532101112223333456778
Q ss_pred EEEccC-CCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC--CCCcEEEEEcCCCceeeee
Q 026679 106 IKFSND-GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--GDGTLHAWNINTRNEVACW 182 (235)
Q Consensus 106 ~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~ 182 (235)
+++.+. ++..++-...+.|.+.++........... .......++++|.+.+|+... ..+.|...++.........
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~--~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC--SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC--CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 999884 44445555678899999876544333321 223468899999666665543 2478999988543333333
Q ss_pred cCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCCCCCC
Q 026679 183 NGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSNSTD 221 (235)
Q Consensus 183 ~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~~~~ 221 (235)
...-.....|+++|++..|..++ +.|..+++++.....+
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 33335678999999888777775 5588888876554433
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=5.6e-07 Score=73.25 Aligned_cols=184 Identities=13% Similarity=0.145 Sum_probs=117.8
Q ss_pred eEEEeecCCCeeEEEeccc-------------------eEEEEecCcceeeeeeeccC---------Cce--EEEcCCCC
Q 026679 18 ISLCMSPVNDSFMSGSLDH-------------------SVRIWDLRVNACQGILRLRG---------RPT--VAFDQQGL 67 (235)
Q Consensus 18 ~~~~~~~~~~~l~s~~~d~-------------------~i~vwd~~~~~~~~~~~~~~---------~~~--~~~~~~~~ 67 (235)
..+++.|+...++.++.++ .|..+|.++++.+..++... .+. ..+..+++
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 3578888888888887766 39999999999888876531 111 22334665
Q ss_pred ---EEEEEecCCeEEEEeccCCCCCCce-------eEeecC-CCcc------------------------eeEEEEccCC
Q 026679 68 ---VFAVAMEAGAIKLFDSRSYDKGPFD-------TFLVGG-DTAE------------------------VCDIKFSNDG 112 (235)
Q Consensus 68 ---~l~~~~~dg~v~i~d~~~~~~~~~~-------~~~~~~-~~~~------------------------v~~~~~~~~~ 112 (235)
.++.++.+|.++++|..+++..... ...... ...+ -..++++|+.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 6888999999999999887641000 000000 0000 0125677766
Q ss_pred CeEEEe------------------------------------cCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC
Q 026679 113 KSMLLT------------------------------------TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG 156 (235)
Q Consensus 113 ~~l~~~------------------------------------~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 156 (235)
..+++. ..+|.|..||+.+++.+-...... ......+...+
T Consensus 393 g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~---~~~~~~~~t~g 469 (668)
T 1kv9_A 393 GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT---HWNGGTLSTAG 469 (668)
T ss_dssp TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS---SCCCCEEEETT
T ss_pred CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC---CCcCceeEeCC
Confidence 554431 124789999999999876665432 23334555678
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeecCCCcce-eEEEeecCCC-EEEEc
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWNGNIGVV-ACLKWAPRRA-MFVAA 204 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~-~l~~~ 204 (235)
.+++.++.|+.+++||.++++.+..+....... .-+.+..+|+ +++.+
T Consensus 470 g~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 470 NLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIM 519 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEE
Confidence 889999999999999999999988876443211 2234445665 44443
No 258
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.83 E-value=3.7e-06 Score=62.13 Aligned_cols=184 Identities=11% Similarity=0.154 Sum_probs=116.9
Q ss_pred CCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcC----CCC---EEEEEec---CCeEEEEeccCCCCCCceeEe
Q 026679 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQ----QGL---VFAVAME---AGAIKLFDSRSYDKGPFDTFL 95 (235)
Q Consensus 26 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~---dg~v~i~d~~~~~~~~~~~~~ 95 (235)
..+++.....+-+.+||+ +++.++.+.....+-+.+-| .++ ++++... ++++.+|++..... .+....
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECS
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeecc
Confidence 356666677788999999 88888888654433344433 333 2333333 57899997743221 111110
Q ss_pred -----ecCCCcceeEEEE--ccC-CC-eEEEecCCCcEEEEEcC-------CCceeeeeccCCCCCcceeeEEeCCCcEE
Q 026679 96 -----VGGDTAEVCDIKF--SND-GK-SMLLTTTNNNIYVLDAY-------GGEKRCGFSLEPSPNTNTEATFTPDGQYV 159 (235)
Q Consensus 96 -----~~~~~~~v~~~~~--~~~-~~-~l~~~~~d~~i~~~d~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 159 (235)
.......+..+++ +|. +. ++++...+|.+..|++. +.+.+..+.+. +.+..+...+....|
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---sq~EgcvvDd~~g~L 194 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN---SQTEGMAADDEYGRL 194 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---SCEEEEEEETTTTEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---CCcceEEEcCCCCeE
Confidence 0011145666777 664 43 67888889999999983 33455666654 347889999988999
Q ss_pred EEeCCCCcEEEEEcC-----CCceeeeec-CC-CcceeEEEee--cCCC-EEEEcc---cceEEeeCC
Q 026679 160 VSGSGDGTLHAWNIN-----TRNEVACWN-GN-IGVVACLKWA--PRRA-MFVAAS---SVLSFWIPN 214 (235)
Q Consensus 160 ~~~~~dg~i~v~d~~-----~~~~~~~~~-~~-~~~v~~~~~~--~~~~-~l~~~~---~~i~iw~~~ 214 (235)
+.+-++.-|..|+.+ +++.+..+. ++ ...+..|++. ++++ +|++++ +.+.+|+.+
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999998777777754 244454442 22 2468888885 4555 666665 569999986
No 259
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.82 E-value=4e-06 Score=64.62 Aligned_cols=194 Identities=13% Similarity=0.098 Sum_probs=112.4
Q ss_pred ceeEEEeecC--CCeeEEEeccceEEEEecCcceeeeeeeccCCc-eEEEcCCCCEEEEEecCC-----eEEEEeccCCC
Q 026679 16 RVISLCMSPV--NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLVFAVAMEAG-----AIKLFDSRSYD 87 (235)
Q Consensus 16 ~v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~dg-----~v~i~d~~~~~ 87 (235)
....++|+|+ +..|+.+...+.|+.+|..++...........+ .++++++++ |+++...+ .+..++.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 4568999984 445555544488999998777765554433323 399999999 44444321 23333333221
Q ss_pred CCCceeEeecCCCcceeEEEEcc-CCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEE-EEeCCC
Q 026679 88 KGPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV-VSGSGD 165 (235)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d 165 (235)
.. ..... .......++++| ++..+++-..++.|+.+|..++.....+...........++|+|++++| ++-...
T Consensus 219 ~~---~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 219 TE---RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp CC---EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred ec---ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 10 01111 123456788999 6665555556788999998877652222111122223469999999855 455567
Q ss_pred CcEEEEEcC--CCce--eeeecCC---------------CcceeEEEe---------ecCCCEEEEcc--cceEEeeCC
Q 026679 166 GTLHAWNIN--TRNE--VACWNGN---------------IGVVACLKW---------APRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 166 g~i~v~d~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~~~~~~l~~~~--~~i~iw~~~ 214 (235)
+.|+.++.. ++.. ...+.+. -.....+++ .+++.++++-. +.|+.++.+
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC
Confidence 889998865 2321 1111111 123567898 66666665554 457777654
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=1.7e-05 Score=60.19 Aligned_cols=191 Identities=10% Similarity=0.004 Sum_probs=114.1
Q ss_pred cceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeecc--CCceEEEcCCCCEE-EEEecCCeEEEEeccCCCCCC
Q 026679 15 ERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLR--GRPTVAFDQQGLVF-AVAMEAGAIKLFDSRSYDKGP 90 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~~~ 90 (235)
.....++|++.+..|+ +-...+.|..+++........+... ....+++++.+..| ++-...+.|.+.++.....
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-- 193 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-- 193 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC--
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce--
Confidence 3467789997655544 4445678988988765443333322 22338899855544 5555577888888765332
Q ss_pred ceeEeecCCCcceeEEEEccCCCeEEEecC-C-CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEE-EeCCCCc
Q 026679 91 FDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-N-NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV-SGSGDGT 167 (235)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~ 167 (235)
.............+++.|.+..|+.+.. . +.|..+++.......... ........++++|++..|+ +-...+.
T Consensus 194 --~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 194 --KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp --EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred --EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE--CCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 2222333356788999997666665543 4 689999876543322221 2223468899998666555 4455778
Q ss_pred EEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEee
Q 026679 168 LHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 212 (235)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~ 212 (235)
|..+|+........+.........|++.. +.++++.. +.|..++
T Consensus 270 I~~~d~dG~~~~~~~~~~~~~P~giav~~-~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 270 IERANLDGSHRKAVISQGLPHPFAITVFE-DSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEECTTSCSCEEEECSSCSSEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCeeEEEEECCCCCceEEEEEC-CEEEEeeCCCCeEEEEE
Confidence 99999864333333333344567888843 33333332 5576666
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.79 E-value=1.7e-05 Score=59.44 Aligned_cols=190 Identities=9% Similarity=0.025 Sum_probs=113.5
Q ss_pred ceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeec--cCCceEEEcCCCCE-EEEEecCCeEEEEeccCCCCCCc
Q 026679 16 RVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRL--RGRPTVAFDQQGLV-FAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~-l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
....++|++.+..|+ +-...+.|..+++........+.. .....+++++.+.. +++-...+.|.+.++.....
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~--- 150 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--- 150 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce---
Confidence 357889997655555 444567888888876544333322 22334899885544 45555678899999875432
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEec-CC-CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEE-EeCCCCcE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTT-TN-NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV-SGSGDGTL 168 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i 168 (235)
.............+++.|.+..|+... .. +.|..+++...... .+. .........++++|++..|+ +-...+.|
T Consensus 151 -~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 151 -KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp -EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ESC-CSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred -EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EEE-ECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 222223335578899999666555544 34 78999987654322 221 12224468899998666555 44556789
Q ss_pred EEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cceEEee
Q 026679 169 HAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWI 212 (235)
Q Consensus 169 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~ 212 (235)
..+|+........+........++++. .+.++++-. +.|..++
T Consensus 228 ~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 228 ERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 999986433332333334456788884 333333332 5566666
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.78 E-value=4.4e-06 Score=58.64 Aligned_cols=147 Identities=13% Similarity=0.132 Sum_probs=95.0
Q ss_pred EEEcCCCCEEEEEecC--CeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEE-ecCCCcEEEEEcCCCceee
Q 026679 60 VAFDQQGLVFAVAMEA--GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL-TTTNNNIYVLDAYGGEKRC 136 (235)
Q Consensus 60 ~~~~~~~~~l~~~~~d--g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~~~ 136 (235)
+.|++ +.++.+.+.+ ..|+.+|+.+++. .....+.. ........+.++.|+. .-.++.+.+||..+.+.+.
T Consensus 26 L~~~~-~~LyestG~~g~S~v~~vD~~tgkv--~~~~~l~~---~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 26 LFYLR-GHLYESTGETGRSSVRKVDLETGRI--LQRAEVPP---PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp EEEET-TEEEEEECCTTSCEEEEEETTTCCE--EEEEECCT---TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred EEEEC-CEEEEECCCCCCceEEEEECCCCCE--EEEEeCCC---CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 77876 5566666665 4899999998764 11222222 2222222333444444 4568999999999999998
Q ss_pred eeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCC--C---cceeEEEeecCCCEEEEc--ccceE
Q 026679 137 GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN--I---GVVACLKWAPRRAMFVAA--SSVLS 209 (235)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~~~--~~~i~ 209 (235)
.+...... ..+.++++.|+.+..++.|.++|..+.+.+..+... . ..+..+.|. +|+..+.. +..|.
T Consensus 100 ti~~~~~G-----wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 100 RFRYPGEG-----WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEECSSCC-----CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEeCCCCc-----eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 88875432 344567777777777889999999999888777532 1 234556665 56544443 26688
Q ss_pred EeeCCCCCC
Q 026679 210 FWIPNPSSN 218 (235)
Q Consensus 210 iw~~~~~~~ 218 (235)
+.|.++++.
T Consensus 174 vIDp~tG~V 182 (243)
T 3mbr_X 174 RIDPASGKV 182 (243)
T ss_dssp EECTTTCBE
T ss_pred EEECCCCCE
Confidence 888877653
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.78 E-value=9.1e-06 Score=61.72 Aligned_cols=193 Identities=8% Similarity=-0.016 Sum_probs=114.6
Q ss_pred eEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEE-EEecCCeEEEEeccCCCCCCceeEe
Q 026679 18 ISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFA-VAMEAGAIKLFDSRSYDKGPFDTFL 95 (235)
Q Consensus 18 ~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~~~~~~~ 95 (235)
.|.+..+ ..+|+.+ ....|+..++..............+. ++|++.+..|+ +-...+.|..+++..... ...
T Consensus 80 ~C~~~~~-~~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~----~~~ 153 (386)
T 3v65_B 80 SCKALGP-EPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV----EEV 153 (386)
T ss_dssp CEEECSS-CCEEEEE-CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE----EEE
T ss_pred eECCccc-cceeEee-cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc----EEE
Confidence 3444444 2334333 34568888887665544444333333 89997655555 445678899998876432 122
Q ss_pred ecCCCcceeEEEEccCCCeE-EEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe-CCC-CcEEEEE
Q 026679 96 VGGDTAEVCDIKFSNDGKSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-SGD-GTLHAWN 172 (235)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d-g~i~v~d 172 (235)
..........+++.+.+..| ++-...+.|.+.++.......... ........++++|.+..|+.. ... +.|..++
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~--~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW--QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec--CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 22222345678888755544 445557789988876543322222 222446889999976655544 334 7888888
Q ss_pred cCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCCC
Q 026679 173 INTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~ 218 (235)
+..................|+++|++..|..+. +.|..+++++...
T Consensus 232 ~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 232 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 280 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC
T ss_pred CCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee
Confidence 754333222222334578999998777776665 5588888776443
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=2e-06 Score=66.31 Aligned_cols=154 Identities=9% Similarity=0.145 Sum_probs=97.6
Q ss_pred ceeEEEeec-CCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEEecC-C----eEEEEeccCCCC
Q 026679 16 RVISLCMSP-VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVAMEA-G----AIKLFDSRSYDK 88 (235)
Q Consensus 16 ~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~d-g----~v~i~d~~~~~~ 88 (235)
....|+++| ++..|+.+...+.|+.+|++.+...........+. ++++++++.|+++... + .+..++... ..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ce
Confidence 457889998 45566666555889999988766554444333344 9999999966666542 2 344444332 22
Q ss_pred CCceeEeecCCCcceeEEEEcc-CCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEE-EEeCCCC
Q 026679 89 GPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYV-VSGSGDG 166 (235)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg 166 (235)
....... .......++++| ++..+++-..++.|..++...+.......... ......++|+|+|++| ++-...+
T Consensus 217 ~~~~~l~---~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 217 KVITELT---KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp CSEEEEE---ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeec---cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCC
Confidence 1111111 123456788999 67666666678899999988765433333222 2346789999999955 4555678
Q ss_pred cEEEEEcC
Q 026679 167 TLHAWNIN 174 (235)
Q Consensus 167 ~i~v~d~~ 174 (235)
.|..++..
T Consensus 293 ~I~~~~~d 300 (430)
T 3tc9_A 293 YILRSDYD 300 (430)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeCC
Confidence 89998865
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.75 E-value=7.6e-06 Score=68.06 Aligned_cols=195 Identities=10% Similarity=0.058 Sum_probs=126.1
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec----------cCCceEEEcCCCCEEEEEecCCeEEEEec
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL----------RGRPTVAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
...|.++...++|. |..|+.++-|..||..++........ ..+..+...++++.|.+|+.++-+..+|.
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 34688888887765 55577777799999877654333211 11223566677875777888778999998
Q ss_pred cCCCCCCceeEee---cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeecc----CCCCCcceeeEEeCCC
Q 026679 84 RSYDKGPFDTFLV---GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL----EPSPNTNTEATFTPDG 156 (235)
Q Consensus 84 ~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~----~~~~~~i~~~~~~~~~ 156 (235)
.+++. ..... ......|.++...++|+. ..++. +-+.+||..+++....... ......|.++...++|
T Consensus 435 ~~~~~---~~~~~~~~~l~~~~v~~i~~d~~g~l-wigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 435 NSGQV---ENFNQRNSQLVNENVYAILPDGEGNL-WLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp TTCCE---EEECTTTSCCSCSCEEEEEECSSSCE-EEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred CCCcE---EEeecCCCCcCCCeeEEEEECCCCCE-EEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 76542 11111 012356888988888874 44555 4588999887655432211 1122568888888888
Q ss_pred cEEEEeCCCCcEEEEEcCCCceeeeec-------CCCcceeEEEeecCCCEEEEcccceEEeeCCCCCC
Q 026679 157 QYVVSGSGDGTLHAWNINTRNEVACWN-------GNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSN 218 (235)
Q Consensus 157 ~~l~~~~~dg~i~v~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~~ 218 (235)
++.+... . -|..||..+++. .+. .....|.++...++|.+.+++.+.+..|+.++...
T Consensus 510 ~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 510 RLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTREGFYCFNEKDKQI 574 (795)
T ss_dssp CEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSCEEEEETTTTEE
T ss_pred CEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCCceeECCCCCcE
Confidence 8666554 4 488899876654 221 12346889999999987777666788888765543
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.71 E-value=9.1e-06 Score=65.05 Aligned_cols=180 Identities=14% Similarity=0.209 Sum_probs=113.0
Q ss_pred EEEeecCCCeeEEEec--------------------c----ceEEEEecCcceeeeeeeccC----------CceEE-Ec
Q 026679 19 SLCMSPVNDSFMSGSL--------------------D----HSVRIWDLRVNACQGILRLRG----------RPTVA-FD 63 (235)
Q Consensus 19 ~~~~~~~~~~l~s~~~--------------------d----~~i~vwd~~~~~~~~~~~~~~----------~~~~~-~~ 63 (235)
.+++.|+..+++.+.. | +.|..+|.++++.+..++... .+++. ..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~ 329 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYK 329 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeee
Confidence 4677777777766552 2 589999999999888876421 12222 21
Q ss_pred -CCCC---EEEEEecCCeEEEEeccCCCCCCceeEeecC----------C-Cc---------------------------
Q 026679 64 -QQGL---VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG----------D-TA--------------------------- 101 (235)
Q Consensus 64 -~~~~---~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~----------~-~~--------------------------- 101 (235)
.+|+ .++.++.+|.++++|..+++.. ....... . ..
T Consensus 330 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l--w~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~ 407 (582)
T 1flg_A 330 AKDGKIVKATAHADRNGFFYVVDRSNGKLQ--NAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPP 407 (582)
T ss_dssp CSSSCEEEEEEEECTTSEEEEEETTTCCEE--EEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSC
T ss_pred cCCCCEEEEEEEECCCceEEEEECCCCCEe--cccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcC
Confidence 4674 7888999999999998876631 1111100 0 00
Q ss_pred -----ceeEEEEccCCCeEEEec---------------------------------CCCcEEEEEcCCCceeeeeccCCC
Q 026679 102 -----EVCDIKFSNDGKSMLLTT---------------------------------TNNNIYVLDAYGGEKRCGFSLEPS 143 (235)
Q Consensus 102 -----~v~~~~~~~~~~~l~~~~---------------------------------~d~~i~~~d~~~~~~~~~~~~~~~ 143 (235)
.-..++++|+...+++.. .+|.|..||+.+++.+-.......
T Consensus 408 ~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~ 487 (582)
T 1flg_A 408 FLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP 487 (582)
T ss_dssp TTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC
T ss_pred CccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC
Confidence 001345666555554432 257899999999988766554321
Q ss_pred CCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcce-eEEEeecCCCEEEE
Q 026679 144 PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVV-ACLKWAPRRAMFVA 203 (235)
Q Consensus 144 ~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~ 203 (235)
...-.....+.+++.++.||.++.||.++|+.+-.++...+.. .-+.+..+|+..++
T Consensus 488 ---~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 488 ---LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ---CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ---CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEE
Confidence 2222233356678889999999999999999998887543321 22566678864433
No 267
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.71 E-value=2.9e-05 Score=56.96 Aligned_cols=157 Identities=15% Similarity=0.209 Sum_probs=104.8
Q ss_pred cceeEEEeecCCCeeEEEe-ccceEEEEecCcceeeeeeeccCC----------ceEEE---cCCCCEEEEEec------
Q 026679 15 ERVISLCMSPVNDSFMSGS-LDHSVRIWDLRVNACQGILRLRGR----------PTVAF---DQQGLVFAVAME------ 74 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~----------~~~~~---~~~~~~l~~~~~------ 74 (235)
-.--+++|++....|..++ ..++|..||...+..... ..... ..+.+ .|+++++++...
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 3445788988666666655 789999999875544333 22221 12888 688777776442
Q ss_pred -------CCeEEEEecc---CCCCCCceeEeecC-----------CCcceeEEEEccCCCeEEEecCC-CcEEEEEcCCC
Q 026679 75 -------AGAIKLFDSR---SYDKGPFDTFLVGG-----------DTAEVCDIKFSNDGKSMLLTTTN-NNIYVLDAYGG 132 (235)
Q Consensus 75 -------dg~v~i~d~~---~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~ 132 (235)
+..+..||+. +++. .....+.. .......++..++|+..++++.. +.|..++....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~--~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKP--VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCC--SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccCCCCEEEEEcCCcCCCCCE--EEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 5789999998 5543 22222211 11347899999999999988888 88888886543
Q ss_pred ceeeeeccCC----CCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCC
Q 026679 133 EKRCGFSLEP----SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175 (235)
Q Consensus 133 ~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 175 (235)
....+.... .....+.++++|+|+.|++....|.|..+|+.+
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred -EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 332222111 112367899999999888877799999999874
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=1.1e-05 Score=64.52 Aligned_cols=188 Identities=14% Similarity=0.078 Sum_probs=116.8
Q ss_pred CeeEEEec------cceEEEEecCcceeeeeeeccCC----------------------------------------ceE
Q 026679 27 DSFMSGSL------DHSVRIWDLRVNACQGILRLRGR----------------------------------------PTV 60 (235)
Q Consensus 27 ~~l~s~~~------d~~i~vwd~~~~~~~~~~~~~~~----------------------------------------~~~ 60 (235)
..++.++. ++.|..+|.++++.+..+..... ..+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 45555554 78999999999988876654321 125
Q ss_pred EEcCCCCEEEEEecC----------------CeEEEEeccCCCCCCceeEeecCCC--------cceeEEEEccCCC---
Q 026679 61 AFDQQGLVFAVAMEA----------------GAIKLFDSRSYDKGPFDTFLVGGDT--------AEVCDIKFSNDGK--- 113 (235)
Q Consensus 61 ~~~~~~~~l~~~~~d----------------g~v~i~d~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~--- 113 (235)
++.++...++.+..+ +.|..+|..+++. ...+....|. .++. +...++|+
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~--~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMA--KWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCE--EEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcE--EEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 666766677666532 3588899988764 2222222221 2221 22234674
Q ss_pred eEEEecCCCcEEEEEcCCCceeeeeccCCCC-----------Ccc--------------------------eeeEEeCCC
Q 026679 114 SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP-----------NTN--------------------------TEATFTPDG 156 (235)
Q Consensus 114 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----------~~i--------------------------~~~~~~~~~ 156 (235)
.++.++.+|.++++|..+++.+......... .++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 5677888999999999999887665443200 011 246788887
Q ss_pred cEEEEeC-------------------------------------CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCC
Q 026679 157 QYVVSGS-------------------------------------GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA 199 (235)
Q Consensus 157 ~~l~~~~-------------------------------------~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (235)
.++++.. .+|.|..||..+++.+-++... .++........+.
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg 476 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGG 476 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTT
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCC
Confidence 7776542 3578999999999987766532 2333333333445
Q ss_pred EEEEcc--cceEEeeCCCCCC
Q 026679 200 MFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 200 ~l~~~~--~~i~iw~~~~~~~ 218 (235)
.++.++ +.++.+|.++++.
T Consensus 477 ~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 477 LVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEcCCCeEEEEECCCCCE
Confidence 555554 7899999877653
No 269
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.68 E-value=4.7e-05 Score=63.33 Aligned_cols=198 Identities=14% Similarity=0.097 Sum_probs=127.9
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec---------cCCceEEEcCCCCEEEEEecCCeEEEEecc
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL---------RGRPTVAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
...|.++...++|.+. .|+.+ -|.+||..++........ ..+..+...++|. +..|+.++-+..++..
T Consensus 262 ~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~ 338 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPI 338 (795)
T ss_dssp CSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGG
T ss_pred CCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCC
Confidence 3568899888877644 44445 588999877654433221 1122366666766 5667777778888876
Q ss_pred CCCCCCceeEee-----cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccC------CCCCcceeeEEe
Q 026679 85 SYDKGPFDTFLV-----GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE------PSPNTNTEATFT 153 (235)
Q Consensus 85 ~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~------~~~~~i~~~~~~ 153 (235)
+... ..... .-....|.++...++|+ |..|+.++-|..||..+++........ .....|.++...
T Consensus 339 ~~~~---~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d 414 (795)
T 4a2l_A 339 RNRF---KNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVD 414 (795)
T ss_dssp GGSS---EEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEE
T ss_pred cccc---eEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEc
Confidence 5432 11111 11234688998888876 666888877999998776543321111 112558888888
Q ss_pred CCCcEEEEeCCCCcEEEEEcCCCceeeeec----CCCcceeEEEeecCCCEEEEcccceEEeeCCCCCC
Q 026679 154 PDGQYVVSGSGDGTLHAWNINTRNEVACWN----GNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSN 218 (235)
Q Consensus 154 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~~ 218 (235)
++|+.|..|+.++-|..||..+++...... .....|.++...+++.+.+...+.+.+|+.++...
T Consensus 415 ~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 415 EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSF 483 (795)
T ss_dssp TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEE
T ss_pred CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeE
Confidence 898856667776679999988766432221 12457899999888887776666688888876543
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.68 E-value=3.8e-05 Score=56.70 Aligned_cols=195 Identities=11% Similarity=0.017 Sum_probs=115.3
Q ss_pred ceeEEEeecCCCee-EEEeccceEEEEecCcceeee-eeec--cCCceEEEcCCC-CEEEEEecCCeEEEEeccCCCCCC
Q 026679 16 RVISLCMSPVNDSF-MSGSLDHSVRIWDLRVNACQG-ILRL--RGRPTVAFDQQG-LVFAVAMEAGAIKLFDSRSYDKGP 90 (235)
Q Consensus 16 ~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~~~~~~~-~~~~--~~~~~~~~~~~~-~~l~~~~~dg~v~i~d~~~~~~~~ 90 (235)
....++|++.+..| .+-...+.|..+++....... .+.. .....+++.+.+ .++++-...+.|.++++.....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-- 113 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-- 113 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE--
Confidence 45678898865444 454556788888887653222 2221 223348898754 4455555678999999875432
Q ss_pred ceeEeecCCCcceeEEEEccCCCeEEEec--CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE-eCCCCc
Q 026679 91 FDTFLVGGDTAEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS-GSGDGT 167 (235)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~ 167 (235)
.............+++.|.+..|+.+. ..+.|..+++..... ..+. ...-.....++++|++..|+. -+..+.
T Consensus 114 --~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~-~~~l~~Pnglavd~~~~~lY~aD~~~~~ 189 (318)
T 3sov_A 114 --KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIII-NSEIYWPNGLTLDYEEQKLYWADAKLNF 189 (318)
T ss_dssp --EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred --EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEE-ECCCCCccEEEEeccCCEEEEEECCCCE
Confidence 222223345678999999766666655 357899998764332 2221 112234688999996665554 456788
Q ss_pred EEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEeeCCCC
Q 026679 168 LHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPS 216 (235)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~ 216 (235)
|..+|+..................+++..++-+++-.. +.|..++..++
T Consensus 190 I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 190 IHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 99999864332222232344567788764432322222 56777777444
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.67 E-value=7.7e-06 Score=65.36 Aligned_cols=180 Identities=12% Similarity=0.072 Sum_probs=113.4
Q ss_pred EEeecCCCeeEEEecc----------------ceEEEEecCcceeeeeeeccC----------Cce-EEEcCCCC---EE
Q 026679 20 LCMSPVNDSFMSGSLD----------------HSVRIWDLRVNACQGILRLRG----------RPT-VAFDQQGL---VF 69 (235)
Q Consensus 20 ~~~~~~~~~l~s~~~d----------------~~i~vwd~~~~~~~~~~~~~~----------~~~-~~~~~~~~---~l 69 (235)
+++.++...++.+..+ +.|..+|.++++.+..++... .++ .....+|+ .+
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 5566666666655432 359999999999887776431 122 22234674 57
Q ss_pred EEEecCCeEEEEeccCCCCCCceeEeecC-----------CCcce--------------------------eEEEEccCC
Q 026679 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGG-----------DTAEV--------------------------CDIKFSNDG 112 (235)
Q Consensus 70 ~~~~~dg~v~i~d~~~~~~~~~~~~~~~~-----------~~~~v--------------------------~~~~~~~~~ 112 (235)
+.++.+|.+.++|..+++.. ....+.. ...++ ..++++|+.
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~--w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLI--VAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEECTTSEEEEEETTTCCEE--EEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEeCCCcEEEEEECCCCCEE--eeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 78889999999999887641 1111111 00011 235777777
Q ss_pred CeEEEec-------------------------------------CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCC
Q 026679 113 KSMLLTT-------------------------------------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPD 155 (235)
Q Consensus 113 ~~l~~~~-------------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~ 155 (235)
..+++.. .++.|..||+.+++..-.+..... +....+...
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~---~~~~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA---AWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC---CCSBCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC---ccceeEEEC
Confidence 6666543 357899999999988776654322 223333445
Q ss_pred CcEEEEeCCCCcEEEEEcCCCceeeeecCCCcc-eeEEEeecCCCEEEEc
Q 026679 156 GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGV-VACLKWAPRRAMFVAA 204 (235)
Q Consensus 156 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~ 204 (235)
+..++.++.||.|+.+|.++++.+..+...... -.-+.+..+++.++..
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEE
Confidence 667778999999999999999998887643221 1223455777765554
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.63 E-value=5.1e-06 Score=67.66 Aligned_cols=187 Identities=11% Similarity=0.059 Sum_probs=118.9
Q ss_pred CCeeEEEeccceEEEEecCcceeeeeeeccCCc-------------eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCce
Q 026679 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-------------TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFD 92 (235)
Q Consensus 26 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~ 92 (235)
+..++.++.++.|..+|..+++.+..+...... .+++ .+..+++++.|+.+..+|..+++. ..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~--~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKA--IW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCE--EE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCE--ee
Confidence 456778888999999999999988777543211 1222 356788888999999999998774 11
Q ss_pred eEeecCCC--cceeE-EEEccCCCeEEEecC------CCcEEEEEcCCCceeeeeccCCC-C------------------
Q 026679 93 TFLVGGDT--AEVCD-IKFSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPS-P------------------ 144 (235)
Q Consensus 93 ~~~~~~~~--~~v~~-~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~-~------------------ 144 (235)
........ ..+.. ..+ .+..++++.. ++.|+.+|..+++.+-.+..... +
T Consensus 142 ~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 22221110 11111 111 1334555543 58999999999998876653211 0
Q ss_pred ----------CcceeeEEeCCCcEEEEeCCCC-------------------cEEEEEcCCCceeeeecC--CC-------
Q 026679 145 ----------NTNTEATFTPDGQYVVSGSGDG-------------------TLHAWNINTRNEVACWNG--NI------- 186 (235)
Q Consensus 145 ----------~~i~~~~~~~~~~~l~~~~~dg-------------------~i~v~d~~~~~~~~~~~~--~~------- 186 (235)
.....++++|+...++.++.++ .|..+|.++|+.+-.++. |.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 0112468888888888887766 399999999998876653 21
Q ss_pred cceeEEEeecCCC---EEEEcc--cceEEeeCCCCCC
Q 026679 187 GVVACLKWAPRRA---MFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 187 ~~v~~~~~~~~~~---~l~~~~--~~i~iw~~~~~~~ 218 (235)
.++....+..+|+ .++.++ |.++++|.+++++
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 2222233334665 566666 7788888877654
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=4.4e-06 Score=68.96 Aligned_cols=138 Identities=13% Similarity=0.132 Sum_probs=85.8
Q ss_pred EEEc-CCCCEEEEEec-CC----eEEEEeccCC-CCCCceeEeecCCCcceeEEEEccCCCeEEEecCC-----CcEEEE
Q 026679 60 VAFD-QQGLVFAVAME-AG----AIKLFDSRSY-DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVL 127 (235)
Q Consensus 60 ~~~~-~~~~~l~~~~~-dg----~v~i~d~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~ 127 (235)
.+|+ |||+.++.+.. +| .|+++|+.++ +.... .. ......++|+|||+.|+....+ ..|+++
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~-----~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV-----SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE-----EEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc-----cCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 8899 99998886654 33 5999999887 52111 11 1123468899999988877664 358888
Q ss_pred EcCCCcee--eeeccCCCCCcceeeEEeCCCcEEEEeC---CCCcEEEEEcCCCc--e--eeeecCCCcceeEEEeecCC
Q 026679 128 DAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGS---GDGTLHAWNINTRN--E--VACWNGNIGVVACLKWAPRR 198 (235)
Q Consensus 128 d~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~v~d~~~~~--~--~~~~~~~~~~v~~~~~~~~~ 198 (235)
++.+++.. ..+... .......+.|+|||++|+... ....|+++|+.++. . .............+.|+..+
T Consensus 253 ~lgt~~~~~~lv~~~~-~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEH-NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp ETTSCGGGCEEEEECC-CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred ECCCCchhcEEEEecC-CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88776422 222222 223456789999999987654 24468899997752 2 22223334455566655444
Q ss_pred CEEEEc
Q 026679 199 AMFVAA 204 (235)
Q Consensus 199 ~~l~~~ 204 (235)
.+++.+
T Consensus 332 ~l~~~t 337 (751)
T 2xe4_A 332 HLVILT 337 (751)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 444443
No 274
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.61 E-value=7.2e-07 Score=72.51 Aligned_cols=199 Identities=10% Similarity=0.072 Sum_probs=111.4
Q ss_pred EEEeecCCCeeEEEec-cceEEEEecCcceeeeeeeccC---CceEEEcCCCCEEEEEe-cC-----CeEEEEeccCCCC
Q 026679 19 SLCMSPVNDSFMSGSL-DHSVRIWDLRVNACQGILRLRG---RPTVAFDQQGLVFAVAM-EA-----GAIKLFDSRSYDK 88 (235)
Q Consensus 19 ~~~~~~~~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~-~d-----g~v~i~d~~~~~~ 88 (235)
++++..++++++.|+. +..+.+||..+++-...-..+. ...++..+++++++.|+ .+ ..+.+||..+...
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 4667788898888884 4589999988765333222222 22366777999999998 34 5789999876442
Q ss_pred CCceeEeecCCCcceeEEEEccCCCeEEEecCC---------CcEEEEEcCCCceeeeeccCCC-------CCcceeeEE
Q 026679 89 GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN---------NNIYVLDAYGGEKRCGFSLEPS-------PNTNTEATF 152 (235)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~~~d~~~~~~~~~~~~~~~-------~~~i~~~~~ 152 (235)
..............-....+..++..++.++.+ ..+..||..+............ ...-.++.|
T Consensus 327 ~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~ 406 (656)
T 1k3i_A 327 TSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMY 406 (656)
T ss_dssp EEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEE
T ss_pred eeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEec
Confidence 100000000000000001123345555555444 3577888877654332221111 111233444
Q ss_pred eC-CCcEEEEeCCCC-----------cEEEEEcCCCceeeee--cCCCcc-eeEEEeecCCCEEEEcc------------
Q 026679 153 TP-DGQYVVSGSGDG-----------TLHAWNINTRNEVACW--NGNIGV-VACLKWAPRRAMFVAAS------------ 205 (235)
Q Consensus 153 ~~-~~~~l~~~~~dg-----------~i~v~d~~~~~~~~~~--~~~~~~-v~~~~~~~~~~~l~~~~------------ 205 (235)
.. ++++++.|+.++ .|.+||..+.+..... ..+... -.++...|++++++.|+
T Consensus 407 ~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 407 DAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp ETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSB
T ss_pred cCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCc
Confidence 43 788888887542 5788888766544332 222222 24556678999999886
Q ss_pred -cceEEeeCCCCC
Q 026679 206 -SVLSFWIPNPSS 217 (235)
Q Consensus 206 -~~i~iw~~~~~~ 217 (235)
.++.+||+.+.+
T Consensus 487 ~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 487 VFTPEIYVPEQDT 499 (656)
T ss_dssp CCCCEEEEGGGTE
T ss_pred ccceEEEcCCCCc
Confidence 237888886543
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.61 E-value=5.2e-05 Score=62.75 Aligned_cols=186 Identities=10% Similarity=0.003 Sum_probs=111.4
Q ss_pred ccceEEEEecCcceeeeeeeccCCce-EEEcCCCCE-EEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccC
Q 026679 34 LDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLV-FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSND 111 (235)
Q Consensus 34 ~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~-l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (235)
....|+..++................ +++++.... +++-...+.|+.+++......................|++.+.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 34567888877655544444333333 888885554 4455556788888887532111112223323455678999887
Q ss_pred CCeEE-EecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC-C-CCcEEEEEcCCCceeeeecCCCcc
Q 026679 112 GKSML-LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS-G-DGTLHAWNINTRNEVACWNGNIGV 188 (235)
Q Consensus 112 ~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-dg~i~v~d~~~~~~~~~~~~~~~~ 188 (235)
++.|+ +-...+.|.+.++.......... ........|+++|.+.+|+... . .+.|.+.++........+......
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~--~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~ 559 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFR--ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 559 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEE--CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEe--CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCC
Confidence 75555 44557889999987554332222 1223478899999766665543 2 378999998544333333333357
Q ss_pred eeEEEeecCCCEEEEcc---cceEEeeCCCCCCCCC
Q 026679 189 VACLKWAPRRAMFVAAS---SVLSFWIPNPSSNSTD 221 (235)
Q Consensus 189 v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~~~~ 221 (235)
...|++++.+..|+.+. ..|...++++.....+
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 88999998877777765 5588888876654443
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.58 E-value=5.7e-05 Score=55.74 Aligned_cols=179 Identities=11% Similarity=0.021 Sum_probs=107.7
Q ss_pred cceEEEEecCccee--eeeeec-cCCceEEEcCCCC-EEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEcc
Q 026679 35 DHSVRIWDLRVNAC--QGILRL-RGRPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 110 (235)
Q Consensus 35 d~~i~vwd~~~~~~--~~~~~~-~~~~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (235)
...|+..+++.... ...+.. .....++|++.+. ++++-...+.|..+++....... .. ....-.....+++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~-~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--NV-VVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--EE-EEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--EE-EcCCCCCccEEEEEc
Confidence 46789999876531 122221 1223488988554 44555567889999987653211 11 111223456788887
Q ss_pred CCC-eEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC--CCCcEEEEEcCCCceeeee-cCCC
Q 026679 111 DGK-SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--GDGTLHAWNINTRNEVACW-NGNI 186 (235)
Q Consensus 111 ~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~-~~~~ 186 (235)
.+. .+++-...+.|.++++.......... ........++++|.+.+|+.+. ..+.|..+++. +.....+ ...-
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~--~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l 165 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFW--QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEI 165 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC--SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSC
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEe--CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCC
Confidence 544 44555567889999986543222221 2224468899999766665554 35788888875 3333232 2223
Q ss_pred cceeEEEeecCCCEEEEcc---cceEEeeCCCCCCC
Q 026679 187 GVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSNS 219 (235)
Q Consensus 187 ~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~~ 219 (235)
.....|+++|++..|..++ +.|..+++++....
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 201 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ 201 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE
Confidence 4568999999877777765 56888888765443
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.57 E-value=3.5e-05 Score=61.80 Aligned_cols=180 Identities=14% Similarity=0.070 Sum_probs=110.4
Q ss_pred cceEEEEecCcceeeeeeeccCCc----------------------------------------eEEEcCCCCEEEEEec
Q 026679 35 DHSVRIWDLRVNACQGILRLRGRP----------------------------------------TVAFDQQGLVFAVAME 74 (235)
Q Consensus 35 d~~i~vwd~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~l~~~~~ 74 (235)
++.|+.+|.++++.+..+...... ..++.+...+++.+..
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Confidence 789999999999887766543211 2456677778887766
Q ss_pred C----------------CeEEEEeccCCCCCCceeEeecCCC--------cceeEEEEc-cCC---CeEEEecCCCcEEE
Q 026679 75 A----------------GAIKLFDSRSYDKGPFDTFLVGGDT--------AEVCDIKFS-NDG---KSMLLTTTNNNIYV 126 (235)
Q Consensus 75 d----------------g~v~i~d~~~~~~~~~~~~~~~~~~--------~~v~~~~~~-~~~---~~l~~~~~d~~i~~ 126 (235)
+ +.|..+|..+++. ...+....|. .++. +... .+| ..++.++.+|.+++
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~--~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~ 337 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEA--KFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYT 337 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCE--EEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEE
T ss_pred CCccccCcccCCCccccceEEEEeCCCCce--eeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEE
Confidence 5 3788899988764 2223333221 1221 2222 467 46777889999999
Q ss_pred EEcCCCceeeeeccCC----------CC-Cc--------------------------ceeeEEeCCCcEEEEe-------
Q 026679 127 LDAYGGEKRCGFSLEP----------SP-NT--------------------------NTEATFTPDGQYVVSG------- 162 (235)
Q Consensus 127 ~d~~~~~~~~~~~~~~----------~~-~~--------------------------i~~~~~~~~~~~l~~~------- 162 (235)
+|.++++.+....... .. .+ -..++++|+..++++.
T Consensus 338 lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~ 417 (599)
T 1w6s_A 338 LDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMD 417 (599)
T ss_dssp EETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEE
T ss_pred EECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEecccccee
Confidence 9999998876554321 00 00 1246777776665442
Q ss_pred --------------------------C------CCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--cce
Q 026679 163 --------------------------S------GDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVL 208 (235)
Q Consensus 163 --------------------------~------~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i 208 (235)
+ ..|.|..||+.+++.+-..... .+...-.....+.++..++ +.+
T Consensus 418 ~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l 496 (599)
T 1w6s_A 418 WEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYL 496 (599)
T ss_dssp EEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEE
T ss_pred eecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeE
Confidence 1 3478999999999887665421 1222111222444554454 778
Q ss_pred EEeeCCCCCC
Q 026679 209 SFWIPNPSSN 218 (235)
Q Consensus 209 ~iw~~~~~~~ 218 (235)
+.||.++++.
T Consensus 497 ~A~D~~tG~~ 506 (599)
T 1w6s_A 497 KARDSDTGDL 506 (599)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCCE
Confidence 8888877653
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=8.1e-06 Score=62.92 Aligned_cols=148 Identities=16% Similarity=0.180 Sum_probs=93.7
Q ss_pred eEEEcC-CCCEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC-CC----cEEEEEcCCC
Q 026679 59 TVAFDQ-QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-NN----NIYVLDAYGG 132 (235)
Q Consensus 59 ~~~~~~-~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~~~d~~~~ 132 (235)
.++++| ++..|+++...+.|+.+|+..... ..+.........++|+++++.|+++.. ++ .+..++. .+
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-----~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-----STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTEE-----EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCEE-----EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 388998 456666666658899999876432 222224456789999999996666654 22 3444443 33
Q ss_pred cee--eeeccCCCCCcceeeEEeC-CCcEEEEeCCCCcEEEEEcCCCceeeeec-CCCcceeEEEeecCCCEEEEcc---
Q 026679 133 EKR--CGFSLEPSPNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTRNEVACWN-GNIGVVACLKWAPRRAMFVAAS--- 205 (235)
Q Consensus 133 ~~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~--- 205 (235)
... ..+... .....++++| +|.++++-..++.|..++...+....... ........++|+|++++|..+.
T Consensus 215 ~~~~~~~l~~~---~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 215 GFKVITELTKG---QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp TSCSEEEEEEC---SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred ceeeeeeeccC---CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 222 112111 2256789999 77777777778899999987665422222 1224568899999999665554
Q ss_pred cceEEeeCCC
Q 026679 206 SVLSFWIPNP 215 (235)
Q Consensus 206 ~~i~iw~~~~ 215 (235)
+.|..++++.
T Consensus 292 ~~I~~~~~d~ 301 (430)
T 3tc9_A 292 HYILRSDYDW 301 (430)
T ss_dssp TEEEEEEEET
T ss_pred CEEEEEeCCc
Confidence 5688877654
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.55 E-value=3e-05 Score=62.16 Aligned_cols=177 Identities=11% Similarity=0.058 Sum_probs=109.6
Q ss_pred EEEeecCCCeeEEEecc----------------ceEEEEecCcceeeeeeeccCC----------ceE-EEc-CCC---C
Q 026679 19 SLCMSPVNDSFMSGSLD----------------HSVRIWDLRVNACQGILRLRGR----------PTV-AFD-QQG---L 67 (235)
Q Consensus 19 ~~~~~~~~~~l~s~~~d----------------~~i~vwd~~~~~~~~~~~~~~~----------~~~-~~~-~~~---~ 67 (235)
.+++.++...++.+..+ +.|..+|.++++.+..++.... +++ ... .+| .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 34566666777766554 3799999999998877765421 222 222 467 5
Q ss_pred EEEEEecCCeEEEEeccCCCCCCceeEeecC-----------CCcce--------------------------eEEEEcc
Q 026679 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG-----------DTAEV--------------------------CDIKFSN 110 (235)
Q Consensus 68 ~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~-----------~~~~v--------------------------~~~~~~~ 110 (235)
.++.++.+|.+.++|.++++... ...+.. ...++ ..++++|
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw--~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp 402 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVS--ANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDP 402 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEE--EEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET
T ss_pred EEEEECCCcEEEEEECCCCCEee--cccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCC
Confidence 67778899999999998876411 111100 00001 1345666
Q ss_pred CCCeEEEe---------------------------------c------CCCcEEEEEcCCCceeeeeccCCCCCcceeeE
Q 026679 111 DGKSMLLT---------------------------------T------TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEAT 151 (235)
Q Consensus 111 ~~~~l~~~---------------------------------~------~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 151 (235)
+...+++. + ..|.|..||+.+++.+-...... +...-.
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~---~~~~g~ 479 (599)
T 1w6s_A 403 KRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF---AVWGGT 479 (599)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS---CCCSBC
T ss_pred CCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC---CccCcc
Confidence 55544332 1 34789999999998876654331 122222
Q ss_pred EeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcc-eeEEEeecCCCE
Q 026679 152 FTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGV-VACLKWAPRRAM 200 (235)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~ 200 (235)
+...+.+++.++.||.++.||.++|+.+-.++..... ..-+.+..+|+.
T Consensus 480 ~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 480 MATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred eEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 3335667888999999999999999998877643221 122455567764
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.55 E-value=0.00012 Score=55.91 Aligned_cols=193 Identities=10% Similarity=-0.010 Sum_probs=111.3
Q ss_pred ccceeEEEeecCCCeeEEE-eccceEEEEecCcc----eeeeeeecc--CCceEEEcCC-CCEEEEEecCCeEEEEeccC
Q 026679 14 KERVISLCMSPVNDSFMSG-SLDHSVRIWDLRVN----ACQGILRLR--GRPTVAFDQQ-GLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~----~~~~~~~~~--~~~~~~~~~~-~~~l~~~~~dg~v~i~d~~~ 85 (235)
...+..++|++.+..|+.+ ...+.|+.+++... .....+... ....+++.+. ++++++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 3467789999866555544 45678888887652 122222211 1223888884 45555555678899988875
Q ss_pred CCCCCceeEeecCCCcceeEEEEccCCCeEEEecC--CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe-
Q 026679 86 YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG- 162 (235)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~- 162 (235)
... .............+++.|.+..|+.... .+.|...++.......... ..-.....++++|++..|+.+
T Consensus 191 ~~~----~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~--~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 191 VKR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp CSE----EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEE
T ss_pred Cce----EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE--CCCCceEEEEEEeCCCEEEEEE
Confidence 432 2222233345789999997666665543 4789999986543322222 222447889999877666555
Q ss_pred CCCCcEEEEEcCCCceeeeecC--CCcceeEEEeecCCCEEEEcc--cceEEeeC
Q 026679 163 SGDGTLHAWNINTRNEVACWNG--NIGVVACLKWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 163 ~~dg~i~v~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
...+.|..+|+........... ......++++..+ .++.+.. +.|..++.
T Consensus 265 ~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~-~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 265 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 318 (400)
T ss_dssp TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETT-EEEEEESSSCSEEEEES
T ss_pred CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCC-EEEEecCCCCeEEEEEc
Confidence 5567899999864333222222 2234557776433 2333322 55776764
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.52 E-value=4.8e-05 Score=60.92 Aligned_cols=187 Identities=13% Similarity=0.084 Sum_probs=112.9
Q ss_pred eeEEEe------ccceEEEEecCcceeeeeeeccCC-------------------------------------------c
Q 026679 28 SFMSGS------LDHSVRIWDLRVNACQGILRLRGR-------------------------------------------P 58 (235)
Q Consensus 28 ~l~s~~------~d~~i~vwd~~~~~~~~~~~~~~~-------------------------------------------~ 58 (235)
.++.++ .++.|+.+|.++++.+........ .
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~ 249 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ 249 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccC
Confidence 566654 378999999999987765543210 1
Q ss_pred eEEEcCCCCEEEEEec--------------------C----CeEEEEeccCCCCCCceeEeecCCC--------cceeEE
Q 026679 59 TVAFDQQGLVFAVAME--------------------A----GAIKLFDSRSYDKGPFDTFLVGGDT--------AEVCDI 106 (235)
Q Consensus 59 ~~~~~~~~~~l~~~~~--------------------d----g~v~i~d~~~~~~~~~~~~~~~~~~--------~~v~~~ 106 (235)
..+++|+..+++.+.. | +.|..+|..+++. ...+....|. .++. +
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~--~W~~q~~~~d~wd~~~~~~p~l-~ 326 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV--KWFYQHTPNDAWDFSGNNELVL-F 326 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE--EEEEESSTTCCSCCCCCCCCEE-E
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE--EEEEeCCCCCcccccCCCCcEE-E
Confidence 1566677777776663 2 5899999988774 1222222221 1221 1
Q ss_pred EEc-cCCC---eEEEecCCCcEEEEEcCCCceeeeeccCCCC-----------C--------------------------
Q 026679 107 KFS-NDGK---SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP-----------N-------------------------- 145 (235)
Q Consensus 107 ~~~-~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-----------~-------------------------- 145 (235)
... .+|+ .++.++.+|.++++|..+++.+..+...... .
T Consensus 327 ~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P 406 (582)
T 1flg_A 327 DYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSP 406 (582)
T ss_dssp EEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESS
T ss_pred eeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECc
Confidence 221 4664 6788999999999999999887655443200 0
Q ss_pred ------cceeeEEeCCCcEEEEeC---------------------------------CCCcEEEEEcCCCceeeeecCCC
Q 026679 146 ------TNTEATFTPDGQYVVSGS---------------------------------GDGTLHAWNINTRNEVACWNGNI 186 (235)
Q Consensus 146 ------~i~~~~~~~~~~~l~~~~---------------------------------~dg~i~v~d~~~~~~~~~~~~~~ 186 (235)
.-..++++|+...+++.. .+|.|..||+.+++.+-+....
T Consensus 407 ~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~- 485 (582)
T 1flg_A 407 PFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH- 485 (582)
T ss_dssp CTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES-
T ss_pred CCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC-
Confidence 011356777655554422 3578999999999987665432
Q ss_pred cceeEEEeecCCCEEEEcc--cceEEeeCCCCCC
Q 026679 187 GVVACLKWAPRRAMFVAAS--SVLSFWIPNPSSN 218 (235)
Q Consensus 187 ~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~~~~ 218 (235)
.++..-.....+.+++.++ +.++.||.++++.
T Consensus 486 ~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 486 LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 2222212222345555565 7799999877653
No 282
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=0.00016 Score=60.04 Aligned_cols=198 Identities=8% Similarity=0.014 Sum_probs=121.7
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeee-----------ccCCceEEEcCCCCEEEEEecCCeEEEEe
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR-----------LRGRPTVAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
...|.++...++|. |..|+.++-|..++...+....... ...+..+...+++. |.+|+.++-+..||
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFE 389 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEE
Confidence 45788988888765 6667767778889876554322211 11122255555565 55667666788888
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
..+....... .........|.++...+++. |..|+.++-+..+|..+++.............|.++...++|.+.+.
T Consensus 390 ~~~~~~~~~~-~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig- 466 (781)
T 3v9f_A 390 NGKRVAIYNK-ENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG- 466 (781)
T ss_dssp TTEEEEECC------CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-
T ss_pred CCCCeEEEcc-CCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-
Confidence 7653211110 00112335688888887776 56677767799999877664332111122356888888888875554
Q ss_pred CCCCcEEEEEcCCCceeeeecCC-----CcceeEEEeecCCCEEEEcc-cceEEeeCCCCC
Q 026679 163 SGDGTLHAWNINTRNEVACWNGN-----IGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSS 217 (235)
Q Consensus 163 ~~dg~i~v~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~-~~i~iw~~~~~~ 217 (235)
+. +-|..||..+++........ ...|.++...++|.+.+... +.+..|+.++..
T Consensus 467 t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 467 TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE
T ss_pred EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe
Confidence 44 45889998776543322211 35789999999998887765 567788876553
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.46 E-value=0.00039 Score=57.64 Aligned_cols=191 Identities=10% Similarity=-0.015 Sum_probs=110.1
Q ss_pred cceeEEEeecCCCee-EEEeccceEEEEecCcc----eeeeeee--ccCCceEEEcCCCCEEE-EEecCCeEEEEeccCC
Q 026679 15 ERVISLCMSPVNDSF-MSGSLDHSVRIWDLRVN----ACQGILR--LRGRPTVAFDQQGLVFA-VAMEAGAIKLFDSRSY 86 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~~~----~~~~~~~--~~~~~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~ 86 (235)
..+..|+|.+.+..| ++-...+.|+.+++... .....+. ......+++.+.+..|+ +-...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 456788888855444 44455677888887642 2222222 12233499998775554 4456789999998754
Q ss_pred CCCCceeEeecCCCcceeEEEEccCCCeEEEecC--CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe-C
Q 026679 87 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-S 163 (235)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~ 163 (235)
.. .............|++.|.+..|+.+.. .+.|...++.......... ........|++++.+..|+.+ .
T Consensus 504 ~~----~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~--~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 504 KR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp SE----EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEET
T ss_pred eE----EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe--CCCCCceEEEEecCCCeEEEEeC
Confidence 32 2222233445789999997666666543 3689999986544332222 222457889999866666554 5
Q ss_pred CCCcEEEEEcCCCceeeeecCC--CcceeEEEeecCCCEEEEcc---cceEEeeC
Q 026679 164 GDGTLHAWNINTRNEVACWNGN--IGVVACLKWAPRRAMFVAAS---SVLSFWIP 213 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~---~~i~iw~~ 213 (235)
..+.|..+++........+... .....+|++.. ..|+.+. +.|...+.
T Consensus 578 ~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~--~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 578 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANR 630 (791)
T ss_dssp TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC--CEEEEEECCCCEEEEEeC
Confidence 5678999998544333333221 22345666643 3455444 44555553
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.46 E-value=0.00016 Score=53.23 Aligned_cols=193 Identities=10% Similarity=0.004 Sum_probs=112.0
Q ss_pred cceeEEEeecCCCeeE-EEeccceEEEEecCc----ceeeeeeec--cCCceEEEcCCCC-EEEEEecCCeEEEEeccCC
Q 026679 15 ERVISLCMSPVNDSFM-SGSLDHSVRIWDLRV----NACQGILRL--RGRPTVAFDQQGL-VFAVAMEAGAIKLFDSRSY 86 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~----~~~~~~~~~--~~~~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~ 86 (235)
.....++|++.++.|+ +-...+.|..+++.. ......+.. .....+++++.+. ++++-...+.|.++++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 3457899998665554 445568899999875 222222221 2234488887554 4455566789999998653
Q ss_pred CCCCceeEeecCCCcceeEEEEccCCCeEEEecC-C-CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE-eC
Q 026679 87 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-N-NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS-GS 163 (235)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~ 163 (235)
.. .............+++.|.+..|+.+.. . +.|..+++... ....+.. ..-.....++++|++..|+. -.
T Consensus 110 ~~----~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~-~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 110 KR----KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVT-ENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp SE----EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEEC-SSCSCEEEEEEETTTTEEEEEET
T ss_pred ce----EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEE-CCCCCceEEEEeccCCEEEEEEC
Confidence 21 2222223346789999996666655544 2 68988887543 3222211 12244688999987666654 45
Q ss_pred CCCcEEEEEcCCCceeeee-c--CCCcceeEEEeecCCCEEEEcc--cceEEeeCCC
Q 026679 164 GDGTLHAWNINTRNEVACW-N--GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPNP 215 (235)
Q Consensus 164 ~dg~i~v~d~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~~ 215 (235)
..+.|..+|+.. .....+ . ........+++.. +.++++.. +.|..++..+
T Consensus 184 ~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 184 KLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp TTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred CCCeEEEEecCC-CceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCC
Confidence 567899999864 322232 2 1223467788853 33333332 5577777543
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.46 E-value=2.9e-05 Score=63.16 Aligned_cols=192 Identities=13% Similarity=0.127 Sum_probs=109.0
Q ss_pred EEEeec-CCCeeEEEeccc-----------eEEEEecCcceeee--eeec-cCCc--eEEEcCCCCEEEEEec-CCeEEE
Q 026679 19 SLCMSP-VNDSFMSGSLDH-----------SVRIWDLRVNACQG--ILRL-RGRP--TVAFDQQGLVFAVAME-AGAIKL 80 (235)
Q Consensus 19 ~~~~~~-~~~~l~s~~~d~-----------~i~vwd~~~~~~~~--~~~~-~~~~--~~~~~~~~~~l~~~~~-dg~v~i 80 (235)
..++.+ +++.++.|+.+. .+.+||..+++-.. .+.. .... ..++.++++++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456677 788888887543 58899998775332 2222 2222 2677889999999984 568999
Q ss_pred EeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEec-CC-----CcEEEEEcCCCceeee-----eccCCCCCccee
Q 026679 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT-TN-----NNIYVLDAYGGEKRCG-----FSLEPSPNTNTE 149 (235)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~~~d~~~~~~~~~-----~~~~~~~~~i~~ 149 (235)
||..+.+..... .+.. ...-.+++..++++.++.|+ .+ ..+.+||..+++.... ..+..... .
T Consensus 270 yd~~t~~W~~~~--~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~---~ 343 (656)
T 1k3i_A 270 YDSSSDSWIPGP--DMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK---Q 343 (656)
T ss_dssp EEGGGTEEEECC--CCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT---T
T ss_pred ecCcCCceeECC--CCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc---c
Confidence 998875431111 1111 11223455667899888888 34 5699999988765432 11111100 1
Q ss_pred eEEeCCCcEEEEeCCCC---------cEEEEEcCCCceeeeecCCCc---------ceeEEEeec-CCCEEEEccc----
Q 026679 150 ATFTPDGQYVVSGSGDG---------TLHAWNINTRNEVACWNGNIG---------VVACLKWAP-RRAMFVAASS---- 206 (235)
Q Consensus 150 ~~~~~~~~~l~~~~~dg---------~i~v~d~~~~~~~~~~~~~~~---------~v~~~~~~~-~~~~l~~~~~---- 206 (235)
..+..+++.++.|+.+| .+..||..+.........+.. .-.++.+.. ++++++.|+.
T Consensus 344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC
Confidence 22334555555554443 467888876654332221111 123344433 6777777761
Q ss_pred ---------ceEEeeCCCC
Q 026679 207 ---------VLSFWIPNPS 216 (235)
Q Consensus 207 ---------~i~iw~~~~~ 216 (235)
.+.+||..+.
T Consensus 424 ~~~~~~~~~~v~~yd~~~~ 442 (656)
T 1k3i_A 424 DSDATTNAHIITLGEPGTS 442 (656)
T ss_dssp SSBCCCCEEEEECCSTTSC
T ss_pred CCCcCCcceEEEcCCCCCC
Confidence 4667776654
No 286
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.46 E-value=0.0002 Score=59.47 Aligned_cols=195 Identities=11% Similarity=0.042 Sum_probs=120.2
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeee--ccCCce--EEEcCCCCEEEEEecCCeEEEEeccCCCCC
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRSYDKG 89 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~ 89 (235)
...|.++...+++. |..|+.++-+..+|..+++...... .....+ +...+++. +..|+. +-+..+|..+....
T Consensus 406 ~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~ 482 (781)
T 3v9f_A 406 SNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVI 482 (781)
T ss_dssp CSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCC
T ss_pred CcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEE
Confidence 45688888877665 4446666678899987765433221 112223 55555665 555555 56888988765431
Q ss_pred CceeEeecC----CCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCC-CCCcceeeEEeCCCcEEEEeCC
Q 026679 90 PFDTFLVGG----DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP-SPNTNTEATFTPDGQYVVSGSG 164 (235)
Q Consensus 90 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~ 164 (235)
...... ....|.++...++|. |..++.++-+..||..+++......... ....|.++...++|.+.+...
T Consensus 483 ---~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 483 ---HHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp ---EEECTTTSSCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-
T ss_pred ---ecccCcccccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-
Confidence 111111 135688998888887 5555654458889987665433211111 124578888888888665544
Q ss_pred CCcEEEEEcCCCceeeeecC----CCcceeEEEeecCCCEEEEcccceEEeeCCCCC
Q 026679 165 DGTLHAWNINTRNEVACWNG----NIGVVACLKWAPRRAMFVAASSVLSFWIPNPSS 217 (235)
Q Consensus 165 dg~i~v~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~ 217 (235)
+|.+..||..+++.. .+.. ....|.++...++|.+.+++.+.+..++.++..
T Consensus 558 ~Glv~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~ 613 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQ-VFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKC 613 (781)
T ss_dssp TEEEEESCTTTCCCE-EECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTE
T ss_pred CCceEEECCCCCcEE-EccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCc
Confidence 665588888766532 2221 123678899999999888887667778776543
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=0.00018 Score=56.05 Aligned_cols=155 Identities=12% Similarity=0.176 Sum_probs=93.7
Q ss_pred ceeEEEeec-CCCeeEEE-eccceEEEEecCcceeeeeeeccC-----CceEEE-------cCCCCEEEEEecCC-----
Q 026679 16 RVISLCMSP-VNDSFMSG-SLDHSVRIWDLRVNACQGILRLRG-----RPTVAF-------DQQGLVFAVAMEAG----- 76 (235)
Q Consensus 16 ~v~~~~~~~-~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~l~~~~~dg----- 76 (235)
....|+|+| ++..|+.+ ...+.|++.|++.+.......... ...++| +++++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 456899998 34444444 444679999988777665554332 223899 99999776666543
Q ss_pred --eEEEEeccC-CCCCC-c--eeEeecCCCcceeEEEEccC-CCeEEEecCCCcEEEEEcC-------CCce--------
Q 026679 77 --AIKLFDSRS-YDKGP-F--DTFLVGGDTAEVCDIKFSND-GKSMLLTTTNNNIYVLDAY-------GGEK-------- 134 (235)
Q Consensus 77 --~v~i~d~~~-~~~~~-~--~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~-------~~~~-------- 134 (235)
.+.+++... +.... . ..... -.....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~---~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA---YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE---ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeecc---CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 255665333 12110 0 11111 123457788995 4445556678889999987 4543
Q ss_pred ---e-eeeccCCCCCcceeeEEeCCCcEE-EEeCCCCcEEEEEcC
Q 026679 135 ---R-CGFSLEPSPNTNTEATFTPDGQYV-VSGSGDGTLHAWNIN 174 (235)
Q Consensus 135 ---~-~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~v~d~~ 174 (235)
. ..+... .......++|+|+|++| ++-+..+.|+.++..
T Consensus 297 ~g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 297 PNTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1 112222 22345789999999954 444667789886653
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.45 E-value=0.00019 Score=53.20 Aligned_cols=189 Identities=8% Similarity=0.003 Sum_probs=101.6
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec-c--CCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCc
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL-R--GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
+.+..+.+.+++..++.+ .++.|.. ..+.++.-..... . ....+++.+++.+++++...+..+-.|-. +.. .
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~t--W 196 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTA--W 196 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSS--C
T ss_pred CCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCc--e
Confidence 456778877766656555 4555432 1122322222211 1 12237788888877666443333333321 111 1
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccC--CCCCcceeeEEeCCCcEEEEeCCCCcEE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLH 169 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 169 (235)
..........+..+.+.++++. +..+.+|.+++.+...++.-...... .....+..+.+.+++..++++. +|.|
T Consensus 197 -~~~~~~~~~~~~~~~~~~~g~~-~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i- 272 (327)
T 2xbg_A 197 -EPHNRTTSRRLHNMGFTPDGRL-WMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL- 272 (327)
T ss_dssp -EEEECCSSSCEEEEEECTTSCE-EEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-
T ss_pred -eECCCCCCCccceeEECCCCCE-EEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-
Confidence 1112234567888999998864 45566787777642223332222221 1123477888998888777665 5666
Q ss_pred EEEcCCCceeeeec---CCCcceeEEEeecCCCEEEEcc-cceEEee
Q 026679 170 AWNINTRNEVACWN---GNIGVVACLKWAPRRAMFVAAS-SVLSFWI 212 (235)
Q Consensus 170 v~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~ 212 (235)
.+....++.-..+. .....+.++.|.+++..++.+. |.+.-++
T Consensus 273 ~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 273 LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 34444454333332 2345688899987777777766 6555443
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.45 E-value=0.00014 Score=56.06 Aligned_cols=196 Identities=10% Similarity=0.143 Sum_probs=108.7
Q ss_pred ccceeEEEeecCCCeeEEEecc---c-eEEEEecCccee-eeeee-ccCCceEEEcC-CCCEEEEEecCCeEEEEeccCC
Q 026679 14 KERVISLCMSPVNDSFMSGSLD---H-SVRIWDLRVNAC-QGILR-LRGRPTVAFDQ-QGLVFAVAMEAGAIKLFDSRSY 86 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d---~-~i~vwd~~~~~~-~~~~~-~~~~~~~~~~~-~~~~l~~~~~dg~v~i~d~~~~ 86 (235)
......++++++|+++++-... . .+...+...+.. ...+. ......++++| ++.++++-..++.|+.+|..++
T Consensus 181 ~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 181 IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 3457889999999844443311 1 233333222211 01122 22223388999 6776666667788999998754
Q ss_pred CCCCceeEeecCCCcceeEEEEccCCCeEEEe-cCCCcEEEEEcCC--Ccee--eeeccC-C------------CCCcce
Q 026679 87 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYG--GEKR--CGFSLE-P------------SPNTNT 148 (235)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~--~~~~--~~~~~~-~------------~~~~i~ 148 (235)
... ...........-..++|+|+++.|+.+ ...+.|..++... +... ..+... . .-....
T Consensus 261 ~~~--~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~ 338 (433)
T 4hw6_A 261 TLT--EEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPN 338 (433)
T ss_dssp CEE--EEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEE
T ss_pred eEE--EEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCc
Confidence 320 011111112223469999999855554 4578899988652 2211 111110 0 012356
Q ss_pred eeEE---------eCCCcEEEEeCCCCcEEEEEcCCCceeeeecCC------------------CcceeEEEee-cCCCE
Q 026679 149 EATF---------TPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN------------------IGVVACLKWA-PRRAM 200 (235)
Q Consensus 149 ~~~~---------~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------------~~~v~~~~~~-~~~~~ 200 (235)
.+++ .++|.++++-...+.|+.++. ++... ++.+. -.....|+++ +++.+
T Consensus 339 giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~l 416 (433)
T 4hw6_A 339 QGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCF 416 (433)
T ss_dssp EEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEE
T ss_pred cEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEE
Confidence 6888 778888777777888999985 55432 22211 1236789999 56655
Q ss_pred EEEcc--cceEEeeC
Q 026679 201 FVAAS--SVLSFWIP 213 (235)
Q Consensus 201 l~~~~--~~i~iw~~ 213 (235)
+++-. ..|+.+++
T Consensus 417 yVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 417 YIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEGGGTEEEEEEE
T ss_pred EEEeCCCCEEEEEec
Confidence 55444 44666654
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.43 E-value=4.9e-06 Score=68.04 Aligned_cols=182 Identities=9% Similarity=-0.017 Sum_probs=104.7
Q ss_pred cceEEEEecCcceeeeeeeccC-CceEEEcCCCCEEEEEe-cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCC
Q 026679 35 DHSVRIWDLRVNACQGILRLRG-RPTVAFDQQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG 112 (235)
Q Consensus 35 d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 112 (235)
.+.|+..++........+.... ...++|++.+..|+.+. ..+.|+.+++......................+++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 4578888887665554443333 33489998766666554 567899998875110000011111112234568888654
Q ss_pred CeE-EEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC--CCcEEEEEcCCCceeeee-cCCCcc
Q 026679 113 KSM-LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG--DGTLHAWNINTRNEVACW-NGNIGV 188 (235)
Q Consensus 113 ~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~-~~~~~~ 188 (235)
..| ++-...+.|.++++........+. ........++++|.+.+|+.+.. .+.|.++++.. .....+ ......
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~--~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFR--EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQW 541 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECC--CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCSSCSS
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEe--CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeCCCCC
Confidence 444 444557889999987554332222 11233577899997666655543 26788888743 322222 222345
Q ss_pred eeEEEeecCCCEEEEcc---cceEEeeCCCCCCC
Q 026679 189 VACLKWAPRRAMFVAAS---SVLSFWIPNPSSNS 219 (235)
Q Consensus 189 v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~~ 219 (235)
...|+|+|++..|..+. +.|.++++++....
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~ 575 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 575 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceE
Confidence 67899999876666654 56888888764433
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.37 E-value=3.1e-05 Score=56.74 Aligned_cols=153 Identities=11% Similarity=0.198 Sum_probs=101.7
Q ss_pred ceEEEcCCCCEEEEEe-cCCeEEEEeccCCCCCCceeEeecC------CCcceeEEEE---ccCCCeEEEec--------
Q 026679 58 PTVAFDQQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGG------DTAEVCDIKF---SNDGKSMLLTT-------- 119 (235)
Q Consensus 58 ~~~~~~~~~~~l~~~~-~dg~v~i~d~~~~~~~~~~~~~~~~------~~~~v~~~~~---~~~~~~l~~~~-------- 119 (235)
..++|++....|..++ ..+.|..||...... ....... ....+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~---~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH---FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCE---EEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeE---EEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3489988666666665 789999999864321 1122211 1124578999 68877776543
Q ss_pred -----CCCcEEEEEcC---CCceeeeeccCC-----------CCCcceeeEEeCCCcEEEEeCCC-CcEEEEEcCCCcee
Q 026679 120 -----TNNNIYVLDAY---GGEKRCGFSLEP-----------SPNTNTEATFTPDGQYVVSGSGD-GTLHAWNINTRNEV 179 (235)
Q Consensus 120 -----~d~~i~~~d~~---~~~~~~~~~~~~-----------~~~~i~~~~~~~~~~~l~~~~~d-g~i~v~d~~~~~~~ 179 (235)
.+..|..||+. +++.+....+.. .......++..++|+..++++.. +.|..++.. ++.+
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~ 171 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTV 171 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEE
Confidence 15779999998 777665444321 11347889999999999988887 888777764 4333
Q ss_pred eeec------CCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 180 ACWN------GNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 180 ~~~~------~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
..+. ......+.|+++|++..|++.. +.+..+|++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 3221 1122467999999999888876 667777776
No 292
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.31 E-value=0.00031 Score=49.87 Aligned_cols=157 Identities=13% Similarity=0.147 Sum_probs=97.1
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCccee---eeeeecc--------CCceEEEcCCCCEEEEEecCCeEEEEec
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC---QGILRLR--------GRPTVAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~---~~~~~~~--------~~~~~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
...-.+++.+++.++++.-.++.+.++++..... ....... ....++++|.++.|+++.......+|.+
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 3456778888887666665677888888765432 2222211 1134999999988888777666666666
Q ss_pred cCCCCC-CceeEe-----ecCCCcceeEEEEccCC-CeEEEecCCCcEEEEEcCCCceeeeeccCCC-------CCccee
Q 026679 84 RSYDKG-PFDTFL-----VGGDTAEVCDIKFSNDG-KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPS-------PNTNTE 149 (235)
Q Consensus 84 ~~~~~~-~~~~~~-----~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-------~~~i~~ 149 (235)
...... ...... .......+..++++|.. ++++.......+..+|.. ++.+..+.+... -.....
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEG 228 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEG 228 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEE
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCe
Confidence 521110 111110 01123457899999954 455556667889999964 567666666532 124678
Q ss_pred eEEeCCCcEEEEeCCCCcEEEEEc
Q 026679 150 ATFTPDGQYVVSGSGDGTLHAWNI 173 (235)
Q Consensus 150 ~~~~~~~~~l~~~~~dg~i~v~d~ 173 (235)
++|.++|++.++ ++.+.+++|.-
T Consensus 229 ia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 229 VAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEECTTCCEEEE-ETTTEEEEEEC
T ss_pred eEECCCCCEEEE-cCCceEEEEEe
Confidence 999999985555 66667777654
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.27 E-value=2.2e-05 Score=64.29 Aligned_cols=174 Identities=13% Similarity=0.021 Sum_probs=100.2
Q ss_pred eeEEEeecCCC-eeEEEeccceEEEEecCcceeeeeeec--cCCceEEEcCCCCEEEEEec-C-CeEEEEeccCCCCCCc
Q 026679 17 VISLCMSPVND-SFMSGSLDHSVRIWDLRVNACQGILRL--RGRPTVAFDQQGLVFAVAME-A-GAIKLFDSRSYDKGPF 91 (235)
Q Consensus 17 v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~-d-g~v~i~d~~~~~~~~~ 91 (235)
...|++.+.+. ++++-...+.|.+.++........+.. .....++++|.+..|+.+.. . +.|..+++.....
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--- 531 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--- 531 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC---
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe---
Confidence 45677775444 444445567899998765443333322 22334899996655555443 2 6777777654322
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEe-cCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 170 (235)
.......-.....|+|+|++..|+.+ ...+.|..+++....................+++..+ .++++....+.|..
T Consensus 532 -~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~ 609 (699)
T 1n7d_A 532 -YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFS 609 (699)
T ss_dssp -CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEE
T ss_pred -eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEE
Confidence 11111222346789999976655554 4567899999865333222221111122455677554 45556666789999
Q ss_pred EEcCCCceeeeecCCCcceeEEEee
Q 026679 171 WNINTRNEVACWNGNIGVVACLKWA 195 (235)
Q Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (235)
++..+++.+..+......+..|++.
T Consensus 610 ~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 610 ANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp EETTTEEEEECCCTTCSSCCCCCBC
T ss_pred EEccCCCceEEeecCCCCCcEEEEe
Confidence 9988888777765433344555544
No 294
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.24 E-value=0.00057 Score=49.84 Aligned_cols=190 Identities=13% Similarity=0.139 Sum_probs=97.0
Q ss_pred CCCeeEEEecc-----ceEEEEecCcceeeeeeeccCC--ceEEEcCCCCEEEEEecCC-----eEEEEeccCCCCCCce
Q 026679 25 VNDSFMSGSLD-----HSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLVFAVAMEAG-----AIKLFDSRSYDKGPFD 92 (235)
Q Consensus 25 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~dg-----~v~i~d~~~~~~~~~~ 92 (235)
++..++.|+.+ ..+.+||..+.+-...-..... ...+...++.+++.|+.++ .+.+||+.+......
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~- 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV- 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeec-
Confidence 45666677654 3577888876643322221111 1122223677888887653 577888776442111
Q ss_pred eEeecCCCcceeEEEEccCCCeEEEecCC-------CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCC
Q 026679 93 TFLVGGDTAEVCDIKFSNDGKSMLLTTTN-------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD 165 (235)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 165 (235)
..+...... .+++. -+++.++.|+.+ ..+.+||+.+.+....-........ .+++ .-++++++.|+.+
T Consensus 140 -~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 140 -APMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSG-AGVG-VLNNLLYAVGGHD 214 (302)
T ss_dssp -CCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEECCBS
T ss_pred -CCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccccc-ccEE-EECCEEEEECCCC
Confidence 011111111 12222 256666666542 4589999988765543222221111 1222 2367788888764
Q ss_pred -----CcEEEEEcCCCceeeeecCCCcce-eEEEeecCCCEEEEcc-------cceEEeeCCCCCCCCC
Q 026679 166 -----GTLHAWNINTRNEVACWNGNIGVV-ACLKWAPRRAMFVAAS-------SVLSFWIPNPSSNSTD 221 (235)
Q Consensus 166 -----g~i~v~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~~~~~ 221 (235)
..+.+||..+.+-...-....... ..+. .-++.+++.|+ .++.+||+++.+-..+
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccCeEE-EECCEEEEECCcCCCcccccEEEEcCCCCeEEEC
Confidence 368899987765432211111111 1222 23667777765 2488888876543333
No 295
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.22 E-value=0.00063 Score=49.55 Aligned_cols=186 Identities=12% Similarity=0.073 Sum_probs=96.4
Q ss_pred CCCeeEEEecc-----ceEEEEecCcce---eeeeeeccC--CceEEEcCCCCEEEEEecC-----CeEEEEeccCCCCC
Q 026679 25 VNDSFMSGSLD-----HSVRIWDLRVNA---CQGILRLRG--RPTVAFDQQGLVFAVAMEA-----GAIKLFDSRSYDKG 89 (235)
Q Consensus 25 ~~~~l~s~~~d-----~~i~vwd~~~~~---~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~ 89 (235)
++..++.|+.+ ..+.+||..+++ -...-..+. ....+...++++++.|+.+ ..+.+||+.+.+..
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 45667777754 358889987655 222211111 1112222367778887754 36888888765431
Q ss_pred CceeEeecCCCcceeEEEEccCCCeEEEecCC-----CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC
Q 026679 90 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 164 (235)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 164 (235)
.. ..+....... +++ .-+++.++.|+.+ ..+.+||+.+.+....-........ .++ ..-++++++.|+.
T Consensus 142 ~~--~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~-~~~~~~i~v~GG~ 215 (301)
T 2vpj_A 142 ML--GDMQTAREGA-GLV-VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSG-AGV-ALLNDHIYVVGGF 215 (301)
T ss_dssp EE--EECSSCCBSC-EEE-EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEE-EEETTEEEEECCB
T ss_pred EC--CCCCCCcccc-eEE-EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccccc-ceE-EEECCEEEEEeCC
Confidence 11 1111111111 122 2266777777654 4589999988765543222221111 112 2236777788876
Q ss_pred C-----CcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-------cceEEeeCCCC
Q 026679 165 D-----GTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPS 216 (235)
Q Consensus 165 d-----g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~ 216 (235)
+ ..+.+||+.+.+-...-..........+..-++++++.|+ .++.+||+++.
T Consensus 216 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 216 DGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 4 4689999987654322111111111112223667777775 34677887654
No 296
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.21 E-value=0.0014 Score=53.01 Aligned_cols=195 Identities=11% Similarity=0.016 Sum_probs=110.2
Q ss_pred cceeEEEeecCCCeeEEEe-ccceEEEEecCccee-eeeeecc--CCceEEEcCCCCEEE-EEecCCeEEEEeccCCCCC
Q 026679 15 ERVISLCMSPVNDSFMSGS-LDHSVRIWDLRVNAC-QGILRLR--GRPTVAFDQQGLVFA-VAMEAGAIKLFDSRSYDKG 89 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~-~d~~i~vwd~~~~~~-~~~~~~~--~~~~~~~~~~~~~l~-~~~~dg~v~i~d~~~~~~~ 89 (235)
+....++|++.+..|+.+. ..+.|..++++.... ...+... ....+++++.+..|+ +-...+.|.+.++.....
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~- 118 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR- 118 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-
Confidence 4567889998666665444 457788888765432 2222221 222399999655544 445678999999876432
Q ss_pred CceeEeecCCCcceeEEEEccCCCeEEEecC--CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE-eCCCC
Q 026679 90 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS-GSGDG 166 (235)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg 166 (235)
.......-.....+++.|.+..|+.+.. .+.|...++.......... ..-.....+++++++..|+. -...+
T Consensus 119 ---~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~--~~~~~P~Glald~~~~~LY~aD~~~~ 193 (619)
T 3s94_A 119 ---KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN--SEIYWPNGLTLDYEEQKLYWADAKLN 193 (619)
T ss_dssp ---EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SSCSSEEEEEEETTTTEEEEEETTTC
T ss_pred ---EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe--CCCCCCcEEEEEccCCEEEEEeCCCC
Confidence 2222233445778999997666665543 4678777775433322221 12244688999997655554 45567
Q ss_pred cEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCCC
Q 026679 167 TLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPSS 217 (235)
Q Consensus 167 ~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~ 217 (235)
.|..+|+..........+......+|++.++ .|..+. +.|...+..+++
T Consensus 194 ~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 194 FIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp CEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCC
T ss_pred eEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCc
Confidence 8999998644332222222233457777655 455544 556666665443
No 297
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.20 E-value=0.00092 Score=50.75 Aligned_cols=146 Identities=13% Similarity=0.229 Sum_probs=94.1
Q ss_pred cCCCeeEEEeccceEEEEecCcceeeeeeecc------CCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCC-------
Q 026679 24 PVNDSFMSGSLDHSVRIWDLRVNACQGILRLR------GRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGP------- 90 (235)
Q Consensus 24 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~------- 90 (235)
.+|..++.+- ++.||.-++.....-+.++.. ....+..+|+|++||..+. ..|.+..+..+....
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 3455555443 467888787654445555544 3444999999999998865 578888887332111
Q ss_pred -ce--eEeecC----CCcceeEEEEccC---CCeEEEecCCCcEEEEEcCCCceee-e-------eccCCCCCcceeeEE
Q 026679 91 -FD--TFLVGG----DTAEVCDIKFSND---GKSMLLTTTNNNIYVLDAYGGEKRC-G-------FSLEPSPNTNTEATF 152 (235)
Q Consensus 91 -~~--~~~~~~----~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~-~-------~~~~~~~~~i~~~~~ 152 (235)
.. .+.+.. ...+|..+.|+|- +..|++-..|+.|++||+....... . +........|.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 11 222221 2467999999994 5679999999999999998632111 1 122222256889999
Q ss_pred eCCCcEEEE--eCCCCcEEEE
Q 026679 153 TPDGQYVVS--GSGDGTLHAW 171 (235)
Q Consensus 153 ~~~~~~l~~--~~~dg~i~v~ 171 (235)
.+++-.|.. .++.|.|+-.
T Consensus 188 g~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcEEEEEecCCCCCEEEE
Confidence 998876666 5578887653
No 298
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.17 E-value=0.00084 Score=49.06 Aligned_cols=185 Identities=10% Similarity=0.065 Sum_probs=96.4
Q ss_pred CCCeeEEEecc----ceEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEEecC------CeEEEEeccCCCCCCce
Q 026679 25 VNDSFMSGSLD----HSVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVAMEA------GAIKLFDSRSYDKGPFD 92 (235)
Q Consensus 25 ~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~d------g~v~i~d~~~~~~~~~~ 92 (235)
++..++.|+.+ ..+.+||..+++-...-..+... ..+..-++++++.|+.+ ..+.+||..+......
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~- 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK- 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE-
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC-
Confidence 45666777654 56888898776533322222211 12223367788888765 4688888876542111
Q ss_pred eEeecCCCcceeEEEEccCCCeEEEecC---------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC
Q 026679 93 TFLVGGDTAEVCDIKFSNDGKSMLLTTT---------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
..+....... +++ .-+++.++.|+. -..+.+||+.+.+....-....... -.++.. -++++++.|+
T Consensus 134 -~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~-~~~~i~v~GG 208 (306)
T 3ii7_A 134 -PSMLTQRCSH-GMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARK-NHGLVF-VKDKIFAVGG 208 (306)
T ss_dssp -CCCSSCCBSC-EEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB-SCEEEE-ETTEEEEECC
T ss_pred -CCCcCCccee-EEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhh-cceEEE-ECCEEEEEeC
Confidence 0111111111 122 225666666653 3458999998876544322222111 112222 2677778877
Q ss_pred CC-----CcEEEEEcCCCceeee--ecCCCcceeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 164 GD-----GTLHAWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 164 ~d-----g~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
.+ ..+.+||..+.+-... +.........+.+ ++.+++.|+ .++.+||+++.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 54 3588999877643322 2211111222222 566666665 447888887643
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.15 E-value=0.00089 Score=49.61 Aligned_cols=176 Identities=11% Similarity=0.160 Sum_probs=104.2
Q ss_pred hhhhhhhhcccccceeEEEeecC----CC---eeEEEe-c--cceEEEEecC--cceeeeeeec---------cCCceEE
Q 026679 3 DNRILRYFKGHKERVISLCMSPV----ND---SFMSGS-L--DHSVRIWDLR--VNACQGILRL---------RGRPTVA 61 (235)
Q Consensus 3 ~~~~~~~~~~h~~~v~~~~~~~~----~~---~l~s~~-~--d~~i~vwd~~--~~~~~~~~~~---------~~~~~~~ 61 (235)
+|+.++.+.. +.++.+..-|+ |+ ++++.. . +++|.+|++. ++. +..+.. ....-++
T Consensus 58 ~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlc 134 (355)
T 3amr_A 58 DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFT 134 (355)
T ss_dssp TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEE
T ss_pred CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEE
Confidence 4555665543 45666666552 22 223333 3 5789999773 333 333311 1111266
Q ss_pred E--cCC-CC-EEEEEecCCeEEEEeccCCCCC---CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcC----
Q 026679 62 F--DQQ-GL-VFAVAMEAGAIKLFDSRSYDKG---PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY---- 130 (235)
Q Consensus 62 ~--~~~-~~-~l~~~~~dg~v~i~d~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~---- 130 (235)
+ +|. +. ++++...+|.+..|++...... ......+ ...+.+..+...+....|+.+-++..|..|+..
T Consensus 135 ly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f-~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~ 213 (355)
T 3amr_A 135 LYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF-KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG 213 (355)
T ss_dssp EEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE-ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSC
T ss_pred EEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe-cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCC
Confidence 6 664 44 6778888999999998542211 1111222 223578888899888889999998888888865
Q ss_pred -CCceeeeeccCCCCCcceeeEEe--CCCc-EEEEeC-CCCcEEEEEcC-CCceeeee
Q 026679 131 -GGEKRCGFSLEPSPNTNTEATFT--PDGQ-YVVSGS-GDGTLHAWNIN-TRNEVACW 182 (235)
Q Consensus 131 -~~~~~~~~~~~~~~~~i~~~~~~--~~~~-~l~~~~-~dg~i~v~d~~-~~~~~~~~ 182 (235)
+++.+.......-...+..|++- ++++ +|++++ .+..+.+||.. +.+.+..+
T Consensus 214 ~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 214 SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred CCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 23444333222222347778884 5555 565555 57789999996 56666665
No 300
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.12 E-value=0.00082 Score=49.22 Aligned_cols=186 Identities=8% Similarity=0.020 Sum_probs=95.1
Q ss_pred CCCeeEEEec----c-----ceEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEEecC-----CeEEEEeccCCCC
Q 026679 25 VNDSFMSGSL----D-----HSVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVAMEA-----GAIKLFDSRSYDK 88 (235)
Q Consensus 25 ~~~~l~s~~~----d-----~~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~ 88 (235)
++..++.|+. + ..+.+||..+.+-...-...... ..+..-++++++.|+.+ ..+.+||+.+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 4566666665 2 35778888766432222111111 12222367777777643 4678888876542
Q ss_pred CCceeEeecCCCcceeEEEEccCCCeEEEecCC-----CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC
Q 026679 89 GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
.... .+.........+.+ ++..++.|+.+ ..+.+||+.+.+....-........ .+++. -++++++.|+
T Consensus 150 ~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG 223 (308)
T 1zgk_A 150 HLVA--PMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSG-AGVCV-LHNCIYAAGG 223 (308)
T ss_dssp EECC--CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECC
T ss_pred eECC--CCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcccc-ceEEE-ECCEEEEEeC
Confidence 1111 11111111122222 56667777654 4589999988765443222221111 12222 2677778887
Q ss_pred CC-----CcEEEEEcCCCceeeeecCCCcc-eeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 164 GD-----GTLHAWNINTRNEVACWNGNIGV-VACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 164 ~d-----g~i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
.+ ..+.+||+.+.+-...-...... -.++.. -++++++.|+ .++.+||+++.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 64 45899998776543221111111 112222 2567777765 347788887653
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.09 E-value=0.0025 Score=51.60 Aligned_cols=178 Identities=12% Similarity=0.045 Sum_probs=110.5
Q ss_pred ccceEEEEecCcceeeeeeeccC---CceEEEcCCCCEEEEE-ecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEc
Q 026679 34 LDHSVRIWDLRVNACQGILRLRG---RPTVAFDQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFS 109 (235)
Q Consensus 34 ~d~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~ 109 (235)
....|+..+++.......+.... ...++|++.+..++.+ ..++.|..+++..... .............+++.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----~~v~~~g~~~P~GlAvD 88 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----EHVVEFGLDYPEGMAVD 88 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSCCCEEEEE
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----EEEEeCCCCCcceEEEE
Confidence 45679999998665443333322 2238999866555544 5678899988875432 22222222356788888
Q ss_pred cCCCeEE-EecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeC--CCCcEEEEEcCCCceeeeecCCC
Q 026679 110 NDGKSML-LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGS--GDGTLHAWNINTRNEVACWNGNI 186 (235)
Q Consensus 110 ~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~ 186 (235)
+.+..|+ +-...+.|.+.++.......... ..-.....++++|...+|+... ..+.|...++.... ...+...-
T Consensus 89 ~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~--~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~ 165 (628)
T 4a0p_A 89 WLGKNLYWADTGTNRIEVSKLDGQHRQVLVW--KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNV 165 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSTTCEEEEC--SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSC
T ss_pred eCCCEEEEEECCCCEEEEEecCCCcEEEEEe--CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCC
Confidence 7655554 44557889999986543322221 2223468899999655555443 35678888875433 33332344
Q ss_pred cceeEEEeecCCCEEEEcc---cceEEeeCCCCCC
Q 026679 187 GVVACLKWAPRRAMFVAAS---SVLSFWIPNPSSN 218 (235)
Q Consensus 187 ~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~~~ 218 (235)
.....|++++++..|..+. +.|...++++...
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR 200 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCCce
Confidence 5678999999888777775 5588888876543
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.06 E-value=0.0013 Score=49.06 Aligned_cols=153 Identities=10% Similarity=0.096 Sum_probs=89.0
Q ss_pred eEEEcCCCCEEEEE------------ecCCeEEEEeccCCCCCCceeEeecC-----CCcceeEEEEcc--CCC-eEEEe
Q 026679 59 TVAFDQQGLVFAVA------------MEAGAIKLFDSRSYDKGPFDTFLVGG-----DTAEVCDIKFSN--DGK-SMLLT 118 (235)
Q Consensus 59 ~~~~~~~~~~l~~~------------~~dg~v~i~d~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~--~~~-~l~~~ 118 (235)
-+++.|+|..++++ ..+|.|.++|..+..... ......+ .......+.+.+ ++. +|+++
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 36677877655555 268999999987543221 2222222 223566777765 343 34444
Q ss_pred -cC--CCcEEEEEcCCC--ceeeeeccC-CCCCcceeeEEeCCCcEEEEeC-----------------CCCcEEEEEcCC
Q 026679 119 -TT--NNNIYVLDAYGG--EKRCGFSLE-PSPNTNTEATFTPDGQYVVSGS-----------------GDGTLHAWNINT 175 (235)
Q Consensus 119 -~~--d~~i~~~d~~~~--~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~v~d~~~ 175 (235)
.. +.+|.+|++... .....-... ..-...+.+.+.++|++.++.. ..|.|+.+|.
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-- 210 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-- 210 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--
Confidence 22 456777776543 222211222 1224578899999999887754 1245555554
Q ss_pred CceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCC
Q 026679 176 RNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 215 (235)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~ 215 (235)
++ +..+...-...+.++|+||++.|..+. +.|..|+++.
T Consensus 211 ~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 211 ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 33 222222234568999999998888775 6688888763
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.06 E-value=0.0029 Score=51.18 Aligned_cols=192 Identities=9% Similarity=-0.013 Sum_probs=117.3
Q ss_pred cceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeecc--CCceEEEcCCCCEE-EEEecCCeEEEEeccCCCCCC
Q 026679 15 ERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLR--GRPTVAFDQQGLVF-AVAMEAGAIKLFDSRSYDKGP 90 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~~l-~~~~~dg~v~i~d~~~~~~~~ 90 (235)
.....++|++.+..|+ +-..++.|+.+++........+... ....+++++.+..| ++-...+.|.+.++.....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-- 114 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-- 114 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC--
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE--
Confidence 3567899998765555 4455788988888654433333322 23348998865555 4444578899999875432
Q ss_pred ceeEeecCCCcceeEEEEccCCCeEEEec--CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe-CCCCc
Q 026679 91 FDTFLVGGDTAEVCDIKFSNDGKSMLLTT--TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-SGDGT 167 (235)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~ 167 (235)
.......-.....+++.|....|+.+. ..+.|...++.......... .-.....++++++++.|+.+ ...+.
T Consensus 115 --~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~---~~~~P~GlalD~~~~~LY~aD~~~~~ 189 (628)
T 4a0p_A 115 --QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP---NVGRANGLTIDYAKRRLYWTDLDTNL 189 (628)
T ss_dssp --EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred --EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC---CCCCcceEEEccccCEEEEEECCCCE
Confidence 222223335578999999655566554 25688888876544333222 22457889999976666554 55778
Q ss_pred EEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCCC
Q 026679 168 LHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNPS 216 (235)
Q Consensus 168 i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~~ 216 (235)
|..+|+..... ..+........++++..+ .|..++ +.|...+..++
T Consensus 190 I~~~d~dG~~~-~v~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 190 IESSNMLGLNR-EVIADDLPHPFGLTQYQD--YIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEEEETTSCSC-EEEEECCSCEEEEEEETT--EEEEEETTTTEEEEEETTTC
T ss_pred EEEEcCCCCce-EEeeccCCCceEEEEECC--EEEEecCCCCEEEEEECCCC
Confidence 99999865433 333333344567887653 344433 55666665443
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.05 E-value=0.0018 Score=48.35 Aligned_cols=183 Identities=14% Similarity=0.143 Sum_probs=104.8
Q ss_pred eeEEEeecCCCeeEEEe------------ccceEEEEecCcce-eeeeeeccC--------Cce-EEEcC--CCC-EEEE
Q 026679 17 VISLCMSPVNDSFMSGS------------LDHSVRIWDLRVNA-CQGILRLRG--------RPT-VAFDQ--QGL-VFAV 71 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~------------~d~~i~vwd~~~~~-~~~~~~~~~--------~~~-~~~~~--~~~-~l~~ 71 (235)
.-.+...|+|..+++++ .+|.|.++|.++.. ....+...+ .+- +.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34566777765555542 68999999987421 112222111 111 55544 453 3444
Q ss_pred Ee-c--CCeEEEEeccCCCCCCceeEeecC-CCcceeEEEEccCCCeEEEec-----------------CCCcEEEEEcC
Q 026679 72 AM-E--AGAIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTT-----------------TNNNIYVLDAY 130 (235)
Q Consensus 72 ~~-~--dg~v~i~d~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~~~d~~ 130 (235)
+. . +..+.+|++..............+ .-...+.+.+.++|...++.. ..|.|+.+|..
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~ 211 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN 211 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC
Confidence 43 2 467888887764331111222222 224578999999998666643 12556666653
Q ss_pred CCceeeeeccCCCCCcceeeEEeCCCcEEEEe-CCCCcEEEEEcCC-Cce--eeeecCCCcceeEEEeec-CCCEEEEcc
Q 026679 131 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-SGDGTLHAWNINT-RNE--VACWNGNIGVVACLKWAP-RRAMFVAAS 205 (235)
Q Consensus 131 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~v~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 205 (235)
+...... .-...+.++|+||++.|+.+ +..+.|+.|++.. ++. ...+ ...+..-.+++.+ +|++.+++.
T Consensus 212 --~~~~~~~---~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 212 --DVRVVAE---GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp --CCEEEEE---EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred --eEEEeec---CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 2221111 11336789999999887665 4578899999863 322 1233 2346778899999 599888664
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.04 E-value=0.0016 Score=47.44 Aligned_cols=189 Identities=7% Similarity=0.015 Sum_probs=97.0
Q ss_pred CCCeeEEEe-cc-----ceEEEEecCcceeeeeeeccC--CceEEEcCCCCEEEEEecC-----CeEEEEeccCCCCCCc
Q 026679 25 VNDSFMSGS-LD-----HSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVFAVAMEA-----GAIKLFDSRSYDKGPF 91 (235)
Q Consensus 25 ~~~~l~s~~-~d-----~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~ 91 (235)
++..++.|+ .+ ..+.+||..+++-...-..+. ....+...++.+++.|+.+ ..+.+||+.+......
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 345666666 32 368889987765332211111 1112333467788888765 4688999887651001
Q ss_pred eeE-eecCCCcceeEEEEccCCCeEEEecCC-----CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCC
Q 026679 92 DTF-LVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD 165 (235)
Q Consensus 92 ~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 165 (235)
... .+.........+. .++..++.|+.+ ..+.+||+.+.+....-........ .+++ ..++++++.|+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG-AGLV-VASGVIYCLGGYD 169 (301)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS-CEEE-EETTEEEEECCBC
T ss_pred EECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc-ceEE-EECCEEEEECCCC
Confidence 111 1111111111222 256667777643 3689999988765543332222111 1222 2367777887754
Q ss_pred -----CcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 166 -----GTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 166 -----g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
..+.+||..+.+-...-..........+..-++.+++.|+ .++.+||+++..
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 4588999877654322111111111111222566777765 347888887653
No 306
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.01 E-value=0.0029 Score=49.42 Aligned_cols=202 Identities=13% Similarity=0.100 Sum_probs=113.5
Q ss_pred ceeEEEe-------ecCCCeeEEEeccc-------eEEEEecCc-ceee-----eeee-ccCCceEEEcC-CCCEEEEEe
Q 026679 16 RVISLCM-------SPVNDSFMSGSLDH-------SVRIWDLRV-NACQ-----GILR-LRGRPTVAFDQ-QGLVFAVAM 73 (235)
Q Consensus 16 ~v~~~~~-------~~~~~~l~s~~~d~-------~i~vwd~~~-~~~~-----~~~~-~~~~~~~~~~~-~~~~l~~~~ 73 (235)
....++| +++++.|+.+...+ .|.+.+... +... ..+. ......++++| ++.++++-.
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~ 266 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSY 266 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEET
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEEC
Confidence 5788999 99998666655443 255665333 2221 1222 22233488999 455566666
Q ss_pred cCCeEEEEecc-------CCCC-CC--------ceeEeecCCCcceeEEEEccCCCeEEEe-cCCCcEEEEEcC--CCce
Q 026679 74 EAGAIKLFDSR-------SYDK-GP--------FDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIYVLDAY--GGEK 134 (235)
Q Consensus 74 ~dg~v~i~d~~-------~~~~-~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~--~~~~ 134 (235)
.++.|..+|+. ++.. .+ ...............++|+|+|+.|+.+ .....|+.++.. .+..
T Consensus 267 ~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~ 346 (496)
T 3kya_A 267 EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEF 346 (496)
T ss_dssp TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCccee
Confidence 78899999997 4442 00 0111112223445789999999964444 567789886653 3321
Q ss_pred e--eeeccC----CC---------CCcce-eeEEe-------CCCcEEEEeCCCCcEEEEEcCCCceeeeecCC------
Q 026679 135 R--CGFSLE----PS---------PNTNT-EATFT-------PDGQYVVSGSGDGTLHAWNINTRNEVACWNGN------ 185 (235)
Q Consensus 135 ~--~~~~~~----~~---------~~~i~-~~~~~-------~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------ 185 (235)
. ..+-.. .. -.... .++.. +++.++++-...+.|+.++ .++. +.++.+.
T Consensus 347 ~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~ 424 (496)
T 3kya_A 347 ITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSL 424 (496)
T ss_dssp CCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHH
T ss_pred cccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccc
Confidence 0 111110 00 01223 34444 5667777777788899998 4553 3333211
Q ss_pred ------------------CcceeEEEeecC-CCEEEEcc--cceEEeeCCCCCCC
Q 026679 186 ------------------IGVVACLKWAPR-RAMFVAAS--SVLSFWIPNPSSNS 219 (235)
Q Consensus 186 ------------------~~~v~~~~~~~~-~~~l~~~~--~~i~iw~~~~~~~~ 219 (235)
-.....|+++++ +.++++-. ..|+.++++.....
T Consensus 425 ~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 425 ADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp HHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred cCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 124678999997 55555444 45888887665433
No 307
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.89 E-value=0.0032 Score=45.91 Aligned_cols=184 Identities=8% Similarity=-0.014 Sum_probs=95.3
Q ss_pred CeeEEEec--cceEEEEecCcceeeeeeeccCC--ceEEEcCCCCEEEEEecC----CeEEEEeccCCCCCCceeEeecC
Q 026679 27 DSFMSGSL--DHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLVFAVAMEA----GAIKLFDSRSYDKGPFDTFLVGG 98 (235)
Q Consensus 27 ~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~d----g~v~i~d~~~~~~~~~~~~~~~~ 98 (235)
.+++.|+. ...+.+||..+++-...-..... ...+...++.+++.|+.+ ..+.+||+.+.+.... ..+..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~--~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSK--LGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEE--ECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEEC--CCCCc
Confidence 34555554 35688899887653322211111 112223467788888754 6788888877543111 11111
Q ss_pred CCcceeEEEEccCCCeEEEecCC------CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC--------
Q 026679 99 DTAEVCDIKFSNDGKSMLLTTTN------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-------- 164 (235)
Q Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------- 164 (235)
.......+ .-+++.++.|+.+ ..+.+||..+.+....-....... -.+++ .-++++++.|+.
T Consensus 91 ~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 91 PRDSLAAC--AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC-SHGMV-EANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCBSCEEE--EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB-SCEEE-EETTEEEEECCEESCTTTCE
T ss_pred cccceeEE--EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc-eeEEE-EECCEEEEECCCCCCCCccc
Confidence 11111122 2266677777754 459999998876544322222111 11222 236677777764
Q ss_pred -CCcEEEEEcCCCceeeeecCCCcc-eeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 165 -DGTLHAWNINTRNEVACWNGNIGV-VACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 165 -dg~i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
-..+.+||..+.+-...-...... -.++... ++++++.|+ .++.+||+.+.+
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 345889998776533221111111 1122222 666777765 347888887653
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.86 E-value=0.0036 Score=45.59 Aligned_cols=184 Identities=13% Similarity=0.113 Sum_probs=93.5
Q ss_pred CCeeEEEecc----ceEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEEecC-----CeEEEEeccCCCCCCceeE
Q 026679 26 NDSFMSGSLD----HSVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVAMEA-----GAIKLFDSRSYDKGPFDTF 94 (235)
Q Consensus 26 ~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~d-----g~v~i~d~~~~~~~~~~~~ 94 (235)
+..++.|+.+ ..+.+||+.+.+-...-..+... ..+...++.+++.|+.+ ..+.+||..+.+.....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-- 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA-- 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC--
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC--
Confidence 3455666643 35788898776533221111111 12222367778887754 35788888765421110
Q ss_pred eecCCCcceeEEEEccCCCeEEEecCCC-----cEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCC----
Q 026679 95 LVGGDTAEVCDIKFSNDGKSMLLTTTNN-----NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD---- 165 (235)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---- 165 (235)
.+.........+. -++..++.|+.++ .+.+||+.+.+....-....... -.+++. -+++.++.|+.+
T Consensus 94 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRS-SVGVGV-VGGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCB-SCEEEE-ETTEEEEECCEETTTT
T ss_pred CCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCccc-CceEEE-ECCEEEEEeCCCCCCC
Confidence 1111111111222 2566777776543 58889988876554322222111 112222 366777777643
Q ss_pred ---CcEEEEEcCCCceeee--ecCCCcceeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 166 ---GTLHAWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 166 ---g~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
..+.+||..+.+-... +...... .++.. -++.+++.|+ .++.+||+++.+
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSG-AGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBS-CEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred ccccEEEEEeCCCCcEEECCCCcccccc-ccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 3588999877654322 2111111 12222 2567777765 357888887643
No 309
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.84 E-value=0.0023 Score=47.77 Aligned_cols=191 Identities=7% Similarity=0.002 Sum_probs=92.3
Q ss_pred CCCeeEEEec-c---------ceEEEEecCcceeee--eee-ccCCceEEEcCCCCEEEEEecC----------------
Q 026679 25 VNDSFMSGSL-D---------HSVRIWDLRVNACQG--ILR-LRGRPTVAFDQQGLVFAVAMEA---------------- 75 (235)
Q Consensus 25 ~~~~l~s~~~-d---------~~i~vwd~~~~~~~~--~~~-~~~~~~~~~~~~~~~l~~~~~d---------------- 75 (235)
++.+++.|+. + ..+.+||..+.+-.. ... .......+...++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 144 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGK 144 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCC
Confidence 4566666765 2 358888887764222 222 1111122233678888888754
Q ss_pred -----------------------CeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC------CCcEEE
Q 026679 76 -----------------------GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT------NNNIYV 126 (235)
Q Consensus 76 -----------------------g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~ 126 (235)
..+.+||+.+...... ..+......-.+++. -+++.++.|+. ...+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~ 221 (357)
T 2uvk_A 145 DSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA--GESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFE 221 (357)
T ss_dssp CHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE--EECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEE
T ss_pred cccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC--CCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEE
Confidence 4788899877543111 111111111022222 25666666654 345788
Q ss_pred EEc--CCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCC----------------------CcEEEEEcCCCcee--e
Q 026679 127 LDA--YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGD----------------------GTLHAWNINTRNEV--A 180 (235)
Q Consensus 127 ~d~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------------------g~i~v~d~~~~~~~--~ 180 (235)
||+ .+.+....-............+...++++++.|+.+ ..+.+||+.+.+-. .
T Consensus 222 ~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~ 301 (357)
T 2uvk_A 222 LDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG 301 (357)
T ss_dssp EECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE
T ss_pred EEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCC
Confidence 887 544433322221111111222333467777888732 24778998765432 2
Q ss_pred eecCCCcceeEEEeecCCCEEEEcc--------cceEEeeCCCCCCCC
Q 026679 181 CWNGNIGVVACLKWAPRRAMFVAAS--------SVLSFWIPNPSSNST 220 (235)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~~~~--------~~i~iw~~~~~~~~~ 220 (235)
.+...... ..+..-++++++.|+ .++.++++++++...
T Consensus 302 ~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 302 ELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp ECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred CCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 22221111 222334677777776 235566777665543
No 310
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.82 E-value=0.0031 Score=43.47 Aligned_cols=179 Identities=10% Similarity=0.032 Sum_probs=96.4
Q ss_pred CCeeEEEeccceEEEEecCcce------eeeeeec---cCCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCce--eE
Q 026679 26 NDSFMSGSLDHSVRIWDLRVNA------CQGILRL---RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFD--TF 94 (235)
Q Consensus 26 ~~~l~s~~~d~~i~vwd~~~~~------~~~~~~~---~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~--~~ 94 (235)
...|+....| +++.=....+. ....+-. .....++|+|++.+.++ .+|.+.-.+..+....... ..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccccc
Confidence 4556677777 66554433322 1112211 33456999999997777 7787766665442221100 01
Q ss_pred eecC-CCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeee-----eccCCCCCcceeeEEeCCCcEEEEeCCCCcE
Q 026679 95 LVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCG-----FSLEPSPNTNTEATFTPDGQYVVSGSGDGTL 168 (235)
Q Consensus 95 ~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 168 (235)
.+.. --.....+.|.|+|.+.++ .||.|+-++..+.....- ......=..+..+.|.|+|.+.++. |+.+
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred EecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 1100 0111467889999986665 669998887643221100 0001111347889999999988777 7765
Q ss_pred EEEEcCCCce------eeee-cCCCcceeEEEeecCCCEEEEcccceEEeeC
Q 026679 169 HAWNINTRNE------VACW-NGNIGVVACLKWAPRRAMFVAASSVLSFWIP 213 (235)
Q Consensus 169 ~v~d~~~~~~------~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~ 213 (235)
+-....+... ...+ ...-...+-+.|.|++.+.++..+ ++|..
T Consensus 157 yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~~g--~~Y~~ 206 (236)
T 1tl2_A 157 YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQGG--KFYED 206 (236)
T ss_dssp EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEETT--EEEEE
T ss_pred EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEeCC--eEEec
Confidence 4333322211 1111 122234555779999988877744 55544
No 311
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.80 E-value=0.01 Score=49.11 Aligned_cols=192 Identities=12% Similarity=0.062 Sum_probs=110.0
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecCCeEEEEeccCCCCCCce
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFD 92 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~ 92 (235)
..|.++.-..++ .|..|+.+| +..||..+.+...........+ +.. .++ .+..++.+ -+..+|..+... .
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~---~ 134 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL---T 134 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE---E
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE---E
Confidence 468887776655 566666655 7889987765432111111112 322 344 56666665 577888765432 1
Q ss_pred eEe---ecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCC----CCCcceeeEEeCCCcEEEEeCCC
Q 026679 93 TFL---VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP----SPNTNTEATFTPDGQYVVSGSGD 165 (235)
Q Consensus 93 ~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d 165 (235)
... .......|.++...+++... .++.+ -+..++..+++... +.... ....|.++...+++..|..|+.
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIY-VGTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEE-EEETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEE-EEeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 110 01123457888777777644 45544 48888877665432 22211 1124777877777765555554
Q ss_pred CcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcccceEEeeCCCCCC
Q 026679 166 GTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSN 218 (235)
Q Consensus 166 g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~~ 218 (235)
+-+..+|..+++...........|.++...+++.+.+...+-+.+++.+....
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~Gl~~~~~~~~~~ 263 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDNGLYVYHNDTTPL 263 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETTEEEEECCTTSCC
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCCceeEEecCCCcE
Confidence 35888898765432211112346888888888888776665677887765443
No 312
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.80 E-value=0.0048 Score=45.09 Aligned_cols=185 Identities=9% Similarity=0.031 Sum_probs=95.1
Q ss_pred CCCeeEEEecc----ceEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEEec----C-----CeEEEEeccCCCCC
Q 026679 25 VNDSFMSGSLD----HSVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVAME----A-----GAIKLFDSRSYDKG 89 (235)
Q Consensus 25 ~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~----d-----g~v~i~d~~~~~~~ 89 (235)
++..++.|+.+ ..+.+||..+++-...-..+... ..+...++.+++.|+. + ..+.+||+.+.+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 45667777642 36888998776533221111111 1222336777777775 2 46788888765421
Q ss_pred CceeEeecCCCcceeEEEEccCCCeEEEecCC-----CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC
Q 026679 90 PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN-----NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 164 (235)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 164 (235)
... .+.........+.+ +++.++.|+.+ ..+.+||..+.+....-......... +++. -++++++.|+.
T Consensus 104 ~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~ 177 (308)
T 1zgk_A 104 PCA--PMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGV-GVAV-LNRLLYAVGGF 177 (308)
T ss_dssp ECC--CCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCB
T ss_pred ECC--CCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccce-EEEE-ECCEEEEEeCC
Confidence 111 11111111122222 56667776643 46889999887654432222221111 2222 26777777775
Q ss_pred C-----CcEEEEEcCCCceeee--ecCCCcceeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 165 D-----GTLHAWNINTRNEVAC--WNGNIGVVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 165 d-----g~i~v~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
+ ..+.+||..+.+-... +...... .++... ++.+++.|+ .++.+||+++.+
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSG-AGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCcccc-ceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 4 4588999876653322 1111111 122222 666777765 348888887653
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.78 E-value=0.0053 Score=45.02 Aligned_cols=149 Identities=15% Similarity=0.122 Sum_probs=77.4
Q ss_pred cCCCeeEEEecc-----------ceEEEEecCcceeeeeeeccCCce--EEEcCCCCEEEEEecC--------CeEEEEe
Q 026679 24 PVNDSFMSGSLD-----------HSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVFAVAMEA--------GAIKLFD 82 (235)
Q Consensus 24 ~~~~~l~s~~~d-----------~~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~d--------g~v~i~d 82 (235)
.++..++.|+.. ..+.+||..+++-...-..+.... .+..-++.+++.|+.+ ..+.+||
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d 123 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYD 123 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEEC
Confidence 456777777741 127788887765322211111111 1222266777777742 4588888
Q ss_pred ccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCC
Q 026679 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDG 156 (235)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 156 (235)
..+.+..... .+...... .++ ...+++.++.|+. -..+.+||..+.+....-....... -.+++ .-++
T Consensus 124 ~~~~~W~~~~--~~p~~r~~-~~~-~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~-~~~~ 197 (315)
T 4asc_A 124 RLSFKWGESD--PLPYVVYG-HTV-LSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS-LFGAT-VHDG 197 (315)
T ss_dssp TTTTEEEECC--CCSSCCBS-CEE-EEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEE-EETT
T ss_pred CCCCcEeECC--CCCCcccc-eeE-EEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh-ceEEE-EECC
Confidence 8765421111 11111111 112 2235666777765 2469999998876544322222111 11222 2367
Q ss_pred cEEEEeCCCC-----cEEEEEcCCCce
Q 026679 157 QYVVSGSGDG-----TLHAWNINTRNE 178 (235)
Q Consensus 157 ~~l~~~~~dg-----~i~v~d~~~~~~ 178 (235)
++++.|+.++ .+.+||..+.+-
T Consensus 198 ~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 198 RIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp EEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred EEEEEeccCCCCccceEEEEECCCCeE
Confidence 7778877654 488899877644
No 314
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.76 E-value=0.0043 Score=46.18 Aligned_cols=144 Identities=14% Similarity=0.199 Sum_probs=80.8
Q ss_pred eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeE--eecCCCcceeEEEEccC---CCeEEEe---cCCCcEEEEEcC
Q 026679 59 TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF--LVGGDTAEVCDIKFSND---GKSMLLT---TTNNNIYVLDAY 130 (235)
Q Consensus 59 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~~~d~~ 130 (235)
.+++.|+|.++++--..|.|++++...+........ ...........++++|+ ...|++. ..++.|.-|.+.
T Consensus 36 ~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~ 115 (347)
T 3das_A 36 GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYD 115 (347)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBC
T ss_pred EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeC
Confidence 389999998776665589999987654332110000 01123456789999995 3344432 245567777765
Q ss_pred CCc--------eeeeec-c-CCCCCcceeeEEeCCCcEEEEeCC-------------CCcEEEEEcCCCce--------e
Q 026679 131 GGE--------KRCGFS-L-EPSPNTNTEATFTPDGQYVVSGSG-------------DGTLHAWNINTRNE--------V 179 (235)
Q Consensus 131 ~~~--------~~~~~~-~-~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~~--------~ 179 (235)
.+. ....+. . .........+.|.|||.+.++.+. .|.|.-.+.. ++. .
T Consensus 116 ~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~nPf~~~ 194 (347)
T 3das_A 116 EKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGNPFPGS 194 (347)
T ss_dssp TTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTCSSTTC
T ss_pred CCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCCCCCCC
Confidence 421 111111 1 111123567999999987777542 3555555543 220 1
Q ss_pred eee-cCCCcceeEEEeecCCCEEEEc
Q 026679 180 ACW-NGNIGVVACLKWAPRRAMFVAA 204 (235)
Q Consensus 180 ~~~-~~~~~~v~~~~~~~~~~~l~~~ 204 (235)
..+ .+|. ....++|+|++.+.++-
T Consensus 195 ~i~a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 195 PVYSYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CEEEBCCS-BCCEEEECTTCCEEEEE
T ss_pred eEEeeCCC-CcceEEECCCCCEEEEe
Confidence 122 2443 45789999988776654
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.69 E-value=0.0085 Score=44.82 Aligned_cols=185 Identities=12% Similarity=0.151 Sum_probs=97.2
Q ss_pred cceeEEEeecC---CCeeEEEec-c-----ceEEEEecCcce-----ee-eeeec-----cCCceEEEcCCCCEEEEEec
Q 026679 15 ERVISLCMSPV---NDSFMSGSL-D-----HSVRIWDLRVNA-----CQ-GILRL-----RGRPTVAFDQQGLVFAVAME 74 (235)
Q Consensus 15 ~~v~~~~~~~~---~~~l~s~~~-d-----~~i~vwd~~~~~-----~~-~~~~~-----~~~~~~~~~~~~~~l~~~~~ 74 (235)
.....|+|+|+ +..|+.+.. . ..|..++...+. .+ ..+.. |....++|.|+|.++++.+.
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 45788999998 555554433 2 567788776431 11 11221 22334999999977666432
Q ss_pred -------------CCeEEEEeccCCCC----------CCceeEeecCCCcceeEEEEcc-CCCeEEEecCCCc-------
Q 026679 75 -------------AGAIKLFDSRSYDK----------GPFDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTNNN------- 123 (235)
Q Consensus 75 -------------dg~v~i~d~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~------- 123 (235)
.|.|.-++....-. ...... ..++ .....++|+| +++.+++-.....
T Consensus 155 ~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~-a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~d 232 (352)
T 2ism_A 155 VYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVY-SLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHD 232 (352)
T ss_dssp TTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEE-EECC-SEECCCEECTTTCCEEEEEECC------CCC
T ss_pred CCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEE-EEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCe
Confidence 24566666543100 001111 1122 2356789999 5554443322222
Q ss_pred -EEEEEcCCCce----------------eeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCce------ee
Q 026679 124 -IYVLDAYGGEK----------------RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE------VA 180 (235)
Q Consensus 124 -i~~~d~~~~~~----------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~------~~ 180 (235)
|.+. ..+.. ........+ .....++| .+|.++++.-..+.|...++..... ..
T Consensus 233 ei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~-~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~ 308 (352)
T 2ism_A 233 EVNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFWPQG-FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVE 308 (352)
T ss_dssp EEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEECTTC-CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEe--ccCCcCCCCcccCCCCCCCCcCCeEecCCC-CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchh
Confidence 3333 22220 001111111 23456777 4677777766677888887764331 12
Q ss_pred eecCCCcceeEEEeecCCCEEEEcc
Q 026679 181 CWNGNIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 181 ~~~~~~~~v~~~~~~~~~~~l~~~~ 205 (235)
.+......+..+++.|||.++++..
T Consensus 309 ~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 309 TALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EEEESSCCEEEEEECTTSCEEEEEC
T ss_pred eecccCCCeeEEEECCCCcEEEEEe
Confidence 2212235789999999998777664
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.68 E-value=0.002 Score=48.25 Aligned_cols=141 Identities=15% Similarity=0.213 Sum_probs=78.2
Q ss_pred eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEe-ecCCCcceeEEEEccC---CCeEEEecC----C----CcEEE
Q 026679 59 TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL-VGGDTAEVCDIKFSND---GKSMLLTTT----N----NNIYV 126 (235)
Q Consensus 59 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~l~~~~~----d----~~i~~ 126 (235)
.++|.|+|+ |+++..+|.|.++|. .+. ....... ..........++++|+ +..|+++.. + ..|..
T Consensus 33 ~ia~~pdG~-l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r 109 (354)
T 3a9g_A 33 SIAPLGGGR-YLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR 109 (354)
T ss_dssp EEEEEETTE-EEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred EEEEcCCCe-EEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence 489999997 455566699998873 222 1110000 1112345789999997 445555443 2 57888
Q ss_pred EEcCCC--c---e--e-eeeccCCCCCcceeeEEeCCCcEEEEeCC-------------CCcEEEEEcCCCce-------
Q 026679 127 LDAYGG--E---K--R-CGFSLEPSPNTNTEATFTPDGQYVVSGSG-------------DGTLHAWNINTRNE------- 178 (235)
Q Consensus 127 ~d~~~~--~---~--~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~~------- 178 (235)
|+.... . . + ..+. .........++|.|||.++++.+. .|.|.-++.. ++.
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~-~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~ 187 (354)
T 3a9g_A 110 GRLDGSTFKLKEVKTLIDGIP-GAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFP 187 (354)
T ss_dssp EEECSSSCCEEEEEEEEEEEE-CCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSST
T ss_pred EEECCCCcCcCccEEEEEcCC-CCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCC
Confidence 887654 1 1 1 1122 111122467999999987776443 2456666653 321
Q ss_pred -eeee-cCCCcceeEEEeec-CCCEEEEcc
Q 026679 179 -VACW-NGNIGVVACLKWAP-RRAMFVAAS 205 (235)
Q Consensus 179 -~~~~-~~~~~~v~~~~~~~-~~~~l~~~~ 205 (235)
...+ .++ .....++|+| ++.++++-.
T Consensus 188 ~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 188 NSPIWSYGH-RNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TCCEEEECC-SCCCEEEECTTTCCEEEEEC
T ss_pred CCcEEEEcc-CCcceEEEeCCCCCEEEEec
Confidence 1111 233 3457899999 666665543
No 317
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.67 E-value=0.009 Score=44.67 Aligned_cols=100 Identities=11% Similarity=0.010 Sum_probs=56.4
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceee--eeee----ccCCc-eEEEcCC---CCEEEEEec-C-----CeEE
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQ--GILR----LRGRP-TVAFDQQ---GLVFAVAME-A-----GAIK 79 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~----~~~~~-~~~~~~~---~~~l~~~~~-d-----g~v~ 79 (235)
.-..++|.|+|+++++ ..++.|++++ +++.. ..+. ..... -++++|+ +..|+++.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4578999999985554 5669999998 34322 1111 11122 2999998 555555443 2 6787
Q ss_pred EEeccCCCCCCc-eeEe-ec---CCCcceeEEEEccCCCeEEEe
Q 026679 80 LFDSRSYDKGPF-DTFL-VG---GDTAEVCDIKFSNDGKSMLLT 118 (235)
Q Consensus 80 i~d~~~~~~~~~-~~~~-~~---~~~~~v~~~~~~~~~~~l~~~ 118 (235)
.++......... .... +. ........++|.|||...++.
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 888764311000 0111 21 111234689999999765554
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.67 E-value=0.0029 Score=43.64 Aligned_cols=146 Identities=13% Similarity=0.063 Sum_probs=79.7
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCccee------eeeeec---cCCceEEEcCCCCEEEEEecCCeEEEEeccC
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC------QGILRL---RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRS 85 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~------~~~~~~---~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~ 85 (235)
..+..++|+|+|.+.+. .+|.+.-.+..+... -..+-. +.-..+.|.|+|.+.++ .||.|.-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36789999998875555 677766666543111 111111 11245889999998888 669888777543
Q ss_pred CCCCCce-e-Eee-cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee-----eeeccCCCCCcceeeEEeCCCc
Q 026679 86 YDKGPFD-T-FLV-GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR-----CGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 86 ~~~~~~~-~-~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
....... . ..+ ..-=..+..+.+.|+|.+.++. |+.++-....++... ........-...+-+.|.|++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 3221110 0 111 1111467899999999865555 777654333211100 0011111112234466888887
Q ss_pred EEEEeCCCCcE
Q 026679 158 YVVSGSGDGTL 168 (235)
Q Consensus 158 ~l~~~~~dg~i 168 (235)
+.++. +|.+
T Consensus 195 l~~v~--~g~~ 203 (236)
T 1tl2_A 195 LFGVQ--GGKF 203 (236)
T ss_dssp EEEEE--TTEE
T ss_pred EEEEe--CCeE
Confidence 77665 6633
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.67 E-value=0.015 Score=47.08 Aligned_cols=192 Identities=11% Similarity=0.035 Sum_probs=108.9
Q ss_pred ceeEEEeecCCCeeE-EEeccceEEEEecCcceeeeeeecc--CCceEEEcCCCC-EEEEEecCCeEEEEeccCCCCCCc
Q 026679 16 RVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLR--GRPTVAFDQQGL-VFAVAMEAGAIKLFDSRSYDKGPF 91 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~~~~~ 91 (235)
.+.+++|.+.+..|+ +-...+.|+.++++.......+... ....+++++.+. ++++-...+.|.+.++.....
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~--- 426 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR--- 426 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC---
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE---
Confidence 456788888555544 4445678888887654333333222 233489987554 555555678999998875432
Q ss_pred eeEeecCCCcceeEEEEccCCCeEEEecC--CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe-CCCCcE
Q 026679 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTT--NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG-SGDGTL 168 (235)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i 168 (235)
.......-.....+++.|....|+.+.. ...|...++..... ..+. ...-.....+++++++..|+.+ +..+.|
T Consensus 427 -~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~-~~~l~~P~GlalD~~~~~LY~aD~~~~~I 503 (619)
T 3s94_A 427 -KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLV-NTSLGWPNGLALDYDEGKIYWGDAKTDKI 503 (619)
T ss_dssp -EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEE-CSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred -EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEE-eCCCCCCeeeEEcccCCEEEEEECCCCEE
Confidence 2222233456789999997445555442 46787777754332 2222 2223457889999876666555 556789
Q ss_pred EEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCC
Q 026679 169 HAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 215 (235)
Q Consensus 169 ~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~ 215 (235)
..+++........+........+|+...+ +|..++ +.|...+..+
T Consensus 504 ~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~ 551 (619)
T 3s94_A 504 EVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRS 551 (619)
T ss_dssp EEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSS
T ss_pred EEEecCCCceEEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCC
Confidence 99998543322222222233455666543 444443 3344444433
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.65 E-value=0.011 Score=45.05 Aligned_cols=136 Identities=14% Similarity=0.253 Sum_probs=85.4
Q ss_pred cCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecC--CCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCce------
Q 026679 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG--DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK------ 134 (235)
Q Consensus 63 ~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~------ 134 (235)
..+|..++.+- ++.||.-++.... ......... .-..+..+..+|+|++|+..+ +..|.+..+..+..
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~--~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDS--LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCS--SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCC--cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 33444444443 3677777776432 223333332 223678899999999888775 45788888873321
Q ss_pred ------eeeeccCC----CCCcceeeEEeCC---CcEEEEeCCCCcEEEEEcCCCc--eeeeec---------CCCccee
Q 026679 135 ------RCGFSLEP----SPNTNTEATFTPD---GQYVVSGSGDGTLHAWNINTRN--EVACWN---------GNIGVVA 190 (235)
Q Consensus 135 ------~~~~~~~~----~~~~i~~~~~~~~---~~~l~~~~~dg~i~v~d~~~~~--~~~~~~---------~~~~~v~ 190 (235)
.+.+.... ...+|..+.|+|- +..|++-..|+.|++||+.... +. .+. .....|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 11223221 2467999999994 5689999999999999997522 11 221 1225688
Q ss_pred EEEeecCCCEEEE
Q 026679 191 CLKWAPRRAMFVA 203 (235)
Q Consensus 191 ~~~~~~~~~~l~~ 203 (235)
+++|.+++-.|..
T Consensus 184 S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 184 DLEFSKDGLTLYC 196 (452)
T ss_dssp EEEECTTSSCEEE
T ss_pred EEEEcCCCcEEEE
Confidence 8999988766555
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.60 E-value=0.0049 Score=47.82 Aligned_cols=103 Identities=12% Similarity=0.114 Sum_probs=53.5
Q ss_pred eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeec------CCCcceeEEEEccC---CCeEEEecC---------
Q 026679 59 TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG------GDTAEVCDIKFSND---GKSMLLTTT--------- 120 (235)
Q Consensus 59 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~l~~~~~--------- 120 (235)
.++|.|+|+++++-...+.|.+++..++... ....+. ........++|+|+ +..|++...
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~--~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSVK--TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEE--EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcEe--EEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 3778888876655443346777765432211 111111 12345678999985 444544432
Q ss_pred ----CCcEEEEEcCCC--ce---eeeec-c-CCCCCcceeeEEeCCCcEEEEeC
Q 026679 121 ----NNNIYVLDAYGG--EK---RCGFS-L-EPSPNTNTEATFTPDGQYVVSGS 163 (235)
Q Consensus 121 ----d~~i~~~d~~~~--~~---~~~~~-~-~~~~~~i~~~~~~~~~~~l~~~~ 163 (235)
...|..|+...+ .. ...+. . .........++|.|||.+.++.+
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665332 11 11111 1 11123468899999998777644
No 322
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.57 E-value=0.012 Score=43.25 Aligned_cols=149 Identities=13% Similarity=0.170 Sum_probs=75.0
Q ss_pred cCCCeeEEEec----cc-------eEEEEecCcceeeeeeeccCCc--eEEEcCCCCEEEEEecC-------CeEEEEec
Q 026679 24 PVNDSFMSGSL----DH-------SVRIWDLRVNACQGILRLRGRP--TVAFDQQGLVFAVAMEA-------GAIKLFDS 83 (235)
Q Consensus 24 ~~~~~l~s~~~----d~-------~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~d-------g~v~i~d~ 83 (235)
.++..++.|+. ++ .+.+||..+++-...-..+... ..+..-++++++.|+.+ ..+.+||+
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 134 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDP 134 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEET
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeC
Confidence 35667777763 11 1677887765433221111111 12222367788888764 35778888
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCc
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
.+.+..... .+...... .+++ ..+++.++.|+. -..+.+||+.+.+....-....... -.+++. -+++
T Consensus 135 ~~~~W~~~~--~~p~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~-~~~~ 208 (318)
T 2woz_A 135 VAAKWSEVK--NLPIKVYG-HNVI-SHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS-MFGVAI-HKGK 208 (318)
T ss_dssp TTTEEEEEC--CCSSCEES-CEEE-EETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB-SCEEEE-ETTE
T ss_pred CCCCEeECC--CCCCcccc-cEEE-EECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc-cceEEE-ECCE
Confidence 764421100 01110011 1122 246666677764 2459999998876544322222111 112222 3667
Q ss_pred EEEEeCCC-----CcEEEEEcCCCce
Q 026679 158 YVVSGSGD-----GTLHAWNINTRNE 178 (235)
Q Consensus 158 ~l~~~~~d-----g~i~v~d~~~~~~ 178 (235)
.++.|+.+ ..+.+||+.+.+-
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred EEEEcCcCCCCccceEEEEECCCCeE
Confidence 77777653 3477899876653
No 323
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.53 E-value=0.0074 Score=45.17 Aligned_cols=144 Identities=11% Similarity=0.177 Sum_probs=76.1
Q ss_pred eEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeE--eecCCCcceeEEEEccC---CCeEEEec-C-------CCcEE
Q 026679 59 TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF--LVGGDTAEVCDIKFSND---GKSMLLTT-T-------NNNIY 125 (235)
Q Consensus 59 ~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~---~~~l~~~~-~-------d~~i~ 125 (235)
.+++.|+|+.++++...|.|++++............ ...........++++|+ +..|++.. . ...|.
T Consensus 22 ~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~ 101 (353)
T 2g8s_A 22 ALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVG 101 (353)
T ss_dssp EEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEE
Confidence 488999998344555678888887432111000000 01112345688999995 44454443 2 23577
Q ss_pred EEEcCCCc--e--ee-eec-cC---CCCCcceeeEEeCCCcEEEEeCC-------------CCcEEEEEcCCCc------
Q 026679 126 VLDAYGGE--K--RC-GFS-LE---PSPNTNTEATFTPDGQYVVSGSG-------------DGTLHAWNINTRN------ 177 (235)
Q Consensus 126 ~~d~~~~~--~--~~-~~~-~~---~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~v~d~~~~~------ 177 (235)
.|++.... . .. .+. .. ........++|.|||.+.++.+. .|.|.-++.. ++
T Consensus 102 r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p~~np 180 (353)
T 2g8s_A 102 YGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIPDDNP 180 (353)
T ss_dssp EEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SCCCTTCT
T ss_pred EEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CCCCCCCC
Confidence 77765431 1 11 111 11 11122467999999976666433 2467777754 32
Q ss_pred -------eeeee-cCCCcceeEEEeec-CCCEEEEc
Q 026679 178 -------EVACW-NGNIGVVACLKWAP-RRAMFVAA 204 (235)
Q Consensus 178 -------~~~~~-~~~~~~v~~~~~~~-~~~~l~~~ 204 (235)
....+ .++ .....++|+| ++.++++-
T Consensus 181 f~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 181 FIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp TTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEE
T ss_pred CcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEe
Confidence 11122 233 3468999999 56555543
No 324
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.49 E-value=0.01 Score=46.10 Aligned_cols=105 Identities=10% Similarity=0.125 Sum_probs=58.5
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccC---------Cc-eEEEcCC---CCEEEEEec-------
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG---------RP-TVAFDQQ---GLVFAVAME------- 74 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~---------~~-~~~~~~~---~~~l~~~~~------- 74 (235)
..-+.|+|.|+|+++++-...+.|++++..++.......... .. -++++|+ +..|.++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 355799999999877765444578888765554332222111 11 3899995 555544442
Q ss_pred ------CCeEEEEeccCCCCC---CceeEe-ec-CCCcceeEEEEccCCCeEEEec
Q 026679 75 ------AGAIKLFDSRSYDKG---PFDTFL-VG-GDTAEVCDIKFSNDGKSMLLTT 119 (235)
Q Consensus 75 ------dg~v~i~d~~~~~~~---~~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~ 119 (235)
...|.-++....... ....+. +. ........++|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665432110 001111 11 1223478899999998777654
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.49 E-value=0.015 Score=42.49 Aligned_cols=180 Identities=8% Similarity=0.000 Sum_probs=103.4
Q ss_pred EEeecCCCeeEEEecc--------------ceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEe--cCC--eEEEE
Q 026679 20 LCMSPVNDSFMSGSLD--------------HSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAM--EAG--AIKLF 81 (235)
Q Consensus 20 ~~~~~~~~~l~s~~~d--------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg--~v~i~ 81 (235)
--+++++++|+-+... ..|+..+++..+..... ......++++++.|+... .++ .|...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~---~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD---PDPCIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE---CSCEEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee---cCCccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 3467788887766542 45777777655433322 223457788888888776 344 44444
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecC-CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT-NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV 160 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 160 (235)
++..... ..+..+.. .+++|+++.|+..+. ...|...++..+.....+. . . . ...+.|++.+|+
T Consensus 135 ~~dGs~~-----~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~-~--~-~~~~~P~g~~iy 199 (302)
T 3s25_A 135 RIDGEEK-----KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--C-N--C-YKPVVLDDTNVY 199 (302)
T ss_dssp ETTSCCC-----EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--S-C--E-EEEEEEETTEEE
T ss_pred ECCCCCe-----EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--C-C--c-cceeeecCCEEE
Confidence 5543221 12222221 456788888887665 6789999987665443322 1 1 1 234669888887
Q ss_pred EeCCC--CcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc----cceEEeeCCCCCCCCCC
Q 026679 161 SGSGD--GTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS----SVLSFWIPNPSSNSTDE 222 (235)
Q Consensus 161 ~~~~d--g~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~i~iw~~~~~~~~~~~ 222 (235)
..... ..|..-++.... ...+.. ..+ ..|+|++.+|..++ ..|..-++++.....+.
T Consensus 200 ~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~ 262 (302)
T 3s25_A 200 YMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELA 262 (302)
T ss_dssp EEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEE
T ss_pred EEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEee
Confidence 65433 357666765443 333332 223 34788888887652 34666666665544443
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.47 E-value=0.018 Score=42.88 Aligned_cols=145 Identities=14% Similarity=0.092 Sum_probs=79.6
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec-------cCC-ceEEEcCC---CCEEEEE-e--cCCeEEE
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL-------RGR-PTVAFDQQ---GLVFAVA-M--EAGAIKL 80 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-------~~~-~~~~~~~~---~~~l~~~-~--~dg~v~i 80 (235)
..-+.|+|.|+|.++++-...|.|++++...++....... ... .-++++|+ +..|.+. + .++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4567899999998777765589999998655543222111 111 23899995 3444443 2 3456666
Q ss_pred EeccCCC-----CCCce-eEe-ec-CCCcceeEEEEccCCCeEEEecC-------------CCcEEEEEcCCCce-----
Q 026679 81 FDSRSYD-----KGPFD-TFL-VG-GDTAEVCDIKFSNDGKSMLLTTT-------------NNNIYVLDAYGGEK----- 134 (235)
Q Consensus 81 ~d~~~~~-----~~~~~-~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~~~----- 134 (235)
|.....+ ..... .+. +. ........+.|.|||.+.++.+. .|.|.-++... +.
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG-~ip~~nP 190 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDG-EPAPGNP 190 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTS-SBCTTCS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCC-CccCCCC
Confidence 6665421 11111 111 11 12223567999999987666442 35565566432 21
Q ss_pred ---eeeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 135 ---RCGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 135 ---~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
...+. ..+ .....++|+|+|.+.++-
T Consensus 191 f~~~~i~a-~G~-RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 191 FPGSPVYS-YGH-RNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp STTCCEEE-BCC-SBCCEEEECTTCCEEEEE
T ss_pred CCCCeEEe-eCC-CCcceEEECCCCCEEEEe
Confidence 01111 122 235678999988766553
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.00034 Score=51.81 Aligned_cols=113 Identities=12% Similarity=0.172 Sum_probs=71.5
Q ss_pred CeeEEEeccceEEEEecCcceeeeeeeccC-CceEEEc-C----CCCEEEEE-ecCCeEEEEeccCCCCCCceeEeecC-
Q 026679 27 DSFMSGSLDHSVRIWDLRVNACQGILRLRG-RPTVAFD-Q----QGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGG- 98 (235)
Q Consensus 27 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~~~-~----~~~~l~~~-~~dg~v~i~d~~~~~~~~~~~~~~~~- 98 (235)
..++.++.||.|.-.|.++|+....++... .+.+... + ++..++.. ..||.+..++..++... .......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~--~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK--LPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE--EEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE--eeeccccc
Confidence 478889999999999999999998887661 1223221 1 22333343 57999999998765321 1111110
Q ss_pred -CCcceeE---EEE-c----cCCCeEEEecCCCcEEEEEcCCCceeeeeccC
Q 026679 99 -DTAEVCD---IKF-S----NDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLE 141 (235)
Q Consensus 99 -~~~~v~~---~~~-~----~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 141 (235)
..+++.. ... . ..+..+++++.+|.+...|+++|+.+..+...
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1112211 000 0 13557899999999999999999999887654
No 328
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.26 E-value=0.027 Score=46.28 Aligned_cols=180 Identities=8% Similarity=0.054 Sum_probs=91.4
Q ss_pred CCCeeEEEeccc------eEEEEecCcceeeee--eeccC-CceEEEcCCCCEEEEEecCC--eEEEEeccCCCCCCcee
Q 026679 25 VNDSFMSGSLDH------SVRIWDLRVNACQGI--LRLRG-RPTVAFDQQGLVFAVAMEAG--AIKLFDSRSYDKGPFDT 93 (235)
Q Consensus 25 ~~~~l~s~~~d~------~i~vwd~~~~~~~~~--~~~~~-~~~~~~~~~~~~l~~~~~dg--~v~i~d~~~~~~~~~~~ 93 (235)
++..++.|+.++ .+.+||..+.+-... +.... ....+...++++++.|+.++ .+.+||..+........
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 566777776543 477888876532222 22111 12244435888899888755 68899987754311110
Q ss_pred E-eecCCCcceeEEEEccC-CCeEEEecC--C-----CcEEEEEcCCCc------eeeeeccCCCCCcceeeEEeCCCcE
Q 026679 94 F-LVGGDTAEVCDIKFSND-GKSMLLTTT--N-----NNIYVLDAYGGE------KRCGFSLEPSPNTNTEATFTPDGQY 158 (235)
Q Consensus 94 ~-~~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~~~d~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~ 158 (235)
. ...........+.+..+ ++.++.|+. + ..+..||+.+.+ .............-.++....++++
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~i 610 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKL 610 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEE
Confidence 0 01111122233455554 666777765 2 458999998877 2221111111111122333334778
Q ss_pred EEEeCC--------CCcEEEEEcCCCceeeeecCCCc------c---eeEEEeecCCCEEEEcc
Q 026679 159 VVSGSG--------DGTLHAWNINTRNEVACWNGNIG------V---VACLKWAPRRAMFVAAS 205 (235)
Q Consensus 159 l~~~~~--------dg~i~v~d~~~~~~~~~~~~~~~------~---v~~~~~~~~~~~l~~~~ 205 (235)
++.|+. ...+.+||..+.+-. ....... + -.+....+++++++.|+
T Consensus 611 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 611 LIVGGTSPSGLFDRTNSIISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673 (695)
T ss_dssp EEECCBCSSCCCCTTTSEEEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECC
T ss_pred EEECCccCCCCCCCCCeEEEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeC
Confidence 888874 345999999876543 1111100 0 02344445667777776
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.24 E-value=0.062 Score=44.17 Aligned_cols=191 Identities=12% Similarity=0.084 Sum_probs=101.0
Q ss_pred cCCCeeEEEecc----ceEEEEecCcceeeeee-e-----ccC---CceEEEcC-CCCEEEEEecC------CeEEEEec
Q 026679 24 PVNDSFMSGSLD----HSVRIWDLRVNACQGIL-R-----LRG---RPTVAFDQ-QGLVFAVAMEA------GAIKLFDS 83 (235)
Q Consensus 24 ~~~~~l~s~~~d----~~i~vwd~~~~~~~~~~-~-----~~~---~~~~~~~~-~~~~l~~~~~d------g~v~i~d~ 83 (235)
.++..++.|+.+ ..+.+||..+++-...- . ... ...++..+ ++++++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 345667777653 35778888776433222 1 111 12244443 77888888754 35788888
Q ss_pred cCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCC--cEEEEEcCCCceeeeec---cCCCCCcceeeEEeCC-Cc
Q 026679 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN--NIYVLDAYGGEKRCGFS---LEPSPNTNTEATFTPD-GQ 157 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~-~~ 157 (235)
.+....... .+.. ...-.+++...++..++.|+.++ .+.+||..+.+....-. ..........+.+..+ ++
T Consensus 476 ~t~~W~~~~--~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTREWSMIK--SLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTEEEECC--CCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCcEEECC--CCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 764421110 0111 11112233324777788887654 79999998876543321 1111122233555655 67
Q ss_pred EEEEeCC--C-----CcEEEEEcCCCce-----eeeecC---CCcceeEEEeecCCCEEEEcc----------cceEEee
Q 026679 158 YVVSGSG--D-----GTLHAWNINTRNE-----VACWNG---NIGVVACLKWAPRRAMFVAAS----------SVLSFWI 212 (235)
Q Consensus 158 ~l~~~~~--d-----g~i~v~d~~~~~~-----~~~~~~---~~~~v~~~~~~~~~~~l~~~~----------~~i~iw~ 212 (235)
.++.|+. + ..+.+||+.+.+. -..+.. ....-.++....++.+++.|+ ..+.+||
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 7788875 2 3588999987761 111111 111112333344366666665 2378888
Q ss_pred CCCCC
Q 026679 213 PNPSS 217 (235)
Q Consensus 213 ~~~~~ 217 (235)
+.+..
T Consensus 633 ~~t~~ 637 (695)
T 2zwa_A 633 PLSET 637 (695)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 87643
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.22 E-value=0.035 Score=40.87 Aligned_cols=173 Identities=9% Similarity=0.068 Sum_probs=99.8
Q ss_pred EEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecC
Q 026679 20 LCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG 98 (235)
Q Consensus 20 ~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 98 (235)
.-.+|..+.+|.-. ..++.++|+++.+.++.+...+..+ ..|-.+.. |+..+ +..|+-|++.... .+...+....
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s-~P~kvFdR~~ 147 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT-VALVT-DNAVYHWSMEGES-QPVKMFDRHS 147 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSE-EEEEE-SSEEEEEESSTTC-CCEEEEECCG
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCe-EEEEc-CCcEEEEcccCCC-CCceeeecch
Confidence 34577777666554 6789999999999999888765333 55654443 33333 4579999987632 3332222211
Q ss_pred --CCcceeEEEEccCCCeEEEecC-------CCcEEEEEcCCCce-----------------------------------
Q 026679 99 --DTAEVCDIKFSNDGKSMLLTTT-------NNNIYVLDAYGGEK----------------------------------- 134 (235)
Q Consensus 99 --~~~~v~~~~~~~~~~~l~~~~~-------d~~i~~~d~~~~~~----------------------------------- 134 (235)
....|..-..+++.++++..+- .|.+.+|..+.+..
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 1244555556666666554332 24556665532210
Q ss_pred -eeeeccCC---------------------CCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEE
Q 026679 135 -RCGFSLEP---------------------SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACL 192 (235)
Q Consensus 135 -~~~~~~~~---------------------~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~ 192 (235)
++..+... ...-..++..++.-..++.-+.-|.|++||+.++.++..-+-...+|..-
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 307 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEe
Confidence 11111100 01122334555555677777888999999999999987765555555444
Q ss_pred Eeec
Q 026679 193 KWAP 196 (235)
Q Consensus 193 ~~~~ 196 (235)
+-++
T Consensus 308 a~~~ 311 (365)
T 2xzh_A 308 APHE 311 (365)
T ss_dssp EEEG
T ss_pred cccC
Confidence 4433
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.07 E-value=0.055 Score=40.49 Aligned_cols=187 Identities=13% Similarity=0.176 Sum_probs=100.2
Q ss_pred cceeEEEeecC---CCeeEEEec----c----ceEEEEecCcc-------eee-eeee---ccCCceEEEcCCCCEEEEE
Q 026679 15 ERVISLCMSPV---NDSFMSGSL----D----HSVRIWDLRVN-------ACQ-GILR---LRGRPTVAFDQQGLVFAVA 72 (235)
Q Consensus 15 ~~v~~~~~~~~---~~~l~s~~~----d----~~i~vwd~~~~-------~~~-~~~~---~~~~~~~~~~~~~~~l~~~ 72 (235)
.....|+++|+ +..|+.+.. + ..|..|+.... +.+ ..+. .|....++|.|+|.++++.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 45788999997 445544332 3 56777776543 111 1122 1233449999999877764
Q ss_pred ec-------------CCeEEEEeccCCCC--CC--ceeEeecCCCcceeEEEEcc-CCCeEEEecCC----CcEEEEEcC
Q 026679 73 ME-------------AGAIKLFDSRSYDK--GP--FDTFLVGGDTAEVCDIKFSN-DGKSMLLTTTN----NNIYVLDAY 130 (235)
Q Consensus 73 ~~-------------dg~v~i~d~~~~~~--~~--~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d----~~i~~~d~~ 130 (235)
+. .|.|.-++....-. .+ .......++ .....++|+| +++ |+++... ..|.+..
T Consensus 153 G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~-- 228 (354)
T 3a9g_A 153 GDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGV-MVATEHGPVGHDEVNIIL-- 228 (354)
T ss_dssp CCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCC-EEEEECCSSSCCEEEEEC--
T ss_pred CCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCC-EEEEecCCCCCcEEEEec--
Confidence 43 24565555543100 00 001112233 2345799999 565 4444332 1244332
Q ss_pred CCce----------------eeeeccCCCCCcceeeEEe-------CCCcEEEEeCCCCcEEEEEcCCC-cee--eee-c
Q 026679 131 GGEK----------------RCGFSLEPSPNTNTEATFT-------PDGQYVVSGSGDGTLHAWNINTR-NEV--ACW-N 183 (235)
Q Consensus 131 ~~~~----------------~~~~~~~~~~~~i~~~~~~-------~~~~~l~~~~~dg~i~v~d~~~~-~~~--~~~-~ 183 (235)
.+.. ...............++|. .+|+++++.-..+.|...++... +.. ..+ .
T Consensus 229 ~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~ 308 (354)
T 3a9g_A 229 KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK 308 (354)
T ss_dssp TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT
T ss_pred CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc
Confidence 2210 0111111112346777873 56777777777788988888643 221 222 2
Q ss_pred CCCcceeEEEeecCCCEEEEcc
Q 026679 184 GNIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 184 ~~~~~v~~~~~~~~~~~l~~~~ 205 (235)
.....+..+++.|||.+.++..
T Consensus 309 ~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 309 NVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCeeEEEECCCCcEEEEEe
Confidence 2245789999999998777654
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.04 E-value=0.058 Score=40.16 Aligned_cols=145 Identities=6% Similarity=-0.006 Sum_probs=74.2
Q ss_pred CCCeeEEEecc-ceEEEEecCc--ce--eeeeee-ccCCceEEEcCCCCEEEEEec-C---------CeEEEEeccCCCC
Q 026679 25 VNDSFMSGSLD-HSVRIWDLRV--NA--CQGILR-LRGRPTVAFDQQGLVFAVAME-A---------GAIKLFDSRSYDK 88 (235)
Q Consensus 25 ~~~~l~s~~~d-~~i~vwd~~~--~~--~~~~~~-~~~~~~~~~~~~~~~l~~~~~-d---------g~v~i~d~~~~~~ 88 (235)
++..++.|+.+ ..+.++|+.+ .+ .+..+. .......+..-++++++.|+. + ..+.+||+.+...
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 56666666643 4688888863 22 222222 111111222236777777776 2 4688899877543
Q ss_pred CCceeEeecCCCcceeEEEEccCCCeEEEecCC---------------------------------------CcEEEEEc
Q 026679 89 GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN---------------------------------------NNIYVLDA 129 (235)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------------------~~i~~~d~ 129 (235)
....... ........ + ...+++.++.|+.+ ..+.+||.
T Consensus 99 ~~~~~~~-p~~r~~~~-~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 99 VKLMSHA-PMGMAGHV-T-FVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EECSCCC-SSCCSSEE-E-EEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred EECCCCC-Ccccccce-E-EEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 1111110 01111111 2 22467777777754 57999999
Q ss_pred CCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC------CCcEEEEEc
Q 026679 130 YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG------DGTLHAWNI 173 (235)
Q Consensus 130 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~i~v~d~ 173 (235)
.+.+....-........-.+++. -++++++.|+. ...+.+||+
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 88765544333221111122332 36677777764 345777876
No 333
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.03 E-value=0.069 Score=40.96 Aligned_cols=174 Identities=9% Similarity=0.068 Sum_probs=101.8
Q ss_pred EEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeecC
Q 026679 20 LCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGG 98 (235)
Q Consensus 20 ~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~ 98 (235)
.-.+|..+.+|.=. ..++.|+|+++.+.++.+...+..+ ..|-.+.. |+.. .+..|+-|++.... .+...+....
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~-l~lV-T~taVyHWsi~~~s-~P~kvFdR~~ 146 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT-VALV-TDNAVYHWSMEGES-QPVKMFDRHS 146 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTE-EEEE-CSSEEEEEESSSSC-CCEEEEECCG
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCe-EEEE-cCCeeEEecccCCC-Cchhheecch
Confidence 34677666666544 6799999999999999888765433 66655443 3333 24589999987632 3332332211
Q ss_pred --CCcceeEEEEccCCCeEEEecC-------CCcEEEEEcCCCce-----------------------------------
Q 026679 99 --DTAEVCDIKFSNDGKSMLLTTT-------NNNIYVLDAYGGEK----------------------------------- 134 (235)
Q Consensus 99 --~~~~v~~~~~~~~~~~l~~~~~-------d~~i~~~d~~~~~~----------------------------------- 134 (235)
....|..-..+++.++++..+- .|.+.+|....+..
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 226 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCC
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 1245555666777776654332 34566665532211
Q ss_pred -eeeeccC---------------------CCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEE
Q 026679 135 -RCGFSLE---------------------PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACL 192 (235)
Q Consensus 135 -~~~~~~~---------------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~ 192 (235)
++.++.. ....-..++..++.-..++.-+.-|.|++||+.++.++..-+-...+|..-
T Consensus 227 kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t 306 (494)
T 1bpo_A 227 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 306 (494)
T ss_dssp EEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEe
Confidence 1111110 001222345566666677788889999999999999887665555555444
Q ss_pred EeecC
Q 026679 193 KWAPR 197 (235)
Q Consensus 193 ~~~~~ 197 (235)
+-+..
T Consensus 307 ~~~~~ 311 (494)
T 1bpo_A 307 APHEA 311 (494)
T ss_dssp EEETT
T ss_pred cccCC
Confidence 44433
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.03 E-value=0.053 Score=39.57 Aligned_cols=177 Identities=9% Similarity=0.022 Sum_probs=98.5
Q ss_pred eecCCCeeEEEe--ccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecC--------------CeEEEEeccC
Q 026679 22 MSPVNDSFMSGS--LDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEA--------------GAIKLFDSRS 85 (235)
Q Consensus 22 ~~~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------------g~v~i~d~~~ 85 (235)
|++++.+++-.. .++.|...+.+... ...+... .+--+++++..|+-+... ..|+..++..
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 345566665543 24556666653333 3333222 234567888888877653 3566666665
Q ss_pred CCCCCceeEeecCCCcceeEEEEccCCCeEEEec----CCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE
Q 026679 86 YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT----TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS 161 (235)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (235)
.+. .. +.. . ....|+++++.|+... .+..|+..++...... .+... . + ..++|+++.|+.
T Consensus 98 ~~~----~~-l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~-~lt~~--~--~--~~~~~~g~~iy~ 161 (302)
T 3s25_A 98 HGS----TV-LDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK-KIKNH--Y--L--FTCNTSDRYFYY 161 (302)
T ss_dssp CCC----EE-EEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE-EEESS--C--C--CCSEEETTEEEE
T ss_pred Ccc----eE-eec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE-EEeCC--C--c--eEeeEECCEEEE
Confidence 442 11 111 1 1236788888888775 3456777776544333 22222 1 1 456888888876
Q ss_pred eCC-CCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcc--c--ceEEeeCCCCCCCCC
Q 026679 162 GSG-DGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--S--VLSFWIPNPSSNSTD 221 (235)
Q Consensus 162 ~~~-dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~i~iw~~~~~~~~~~ 221 (235)
.+. ...|++.++..+.....+.+ ... ..+.|++.+|+-.. + .|..-++++.....+
T Consensus 162 t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~L 222 (302)
T 3s25_A 162 NNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVL 222 (302)
T ss_dssp ECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEEC
T ss_pred EeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEE
Confidence 654 67888888866554433332 222 34669998888765 2 355555665554433
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.02 E-value=0.055 Score=39.60 Aligned_cols=181 Identities=10% Similarity=0.044 Sum_probs=90.4
Q ss_pred eeEEEeccceEEEEecCcceeeee-eeccC--CceEEEcCCCCEEEEEec----CC-------eEEEEeccCCCCCCcee
Q 026679 28 SFMSGSLDHSVRIWDLRVNACQGI-LRLRG--RPTVAFDQQGLVFAVAME----AG-------AIKLFDSRSYDKGPFDT 93 (235)
Q Consensus 28 ~l~s~~~d~~i~vwd~~~~~~~~~-~~~~~--~~~~~~~~~~~~l~~~~~----dg-------~v~i~d~~~~~~~~~~~ 93 (235)
.++.|+. .+..||..+++-... ..... ....+...++.+++.|+. ++ .+..||..+.+.....
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~- 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP- 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS-
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC-
Confidence 3444543 378899887764331 11111 112344557888888873 12 2677887664421111
Q ss_pred EeecCCCcceeEEEEccCCCeEEEecCC-------CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC--
Q 026679 94 FLVGGDTAEVCDIKFSNDGKSMLLTTTN-------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG-- 164 (235)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-- 164 (235)
.+....... +++. -++..++.|+.+ ..+.+||..+.+....-....... -.++ ...++++++.|+.
T Consensus 95 -~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~-~~~~~~iyv~GG~~~ 169 (318)
T 2woz_A 95 -PLPSARCLF-GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY-GHNV-ISHNGMIYCLGGKTD 169 (318)
T ss_dssp -CBSSCBCSC-EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE-SCEE-EEETTEEEEECCEES
T ss_pred -CCCcccccc-ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc-ccEE-EEECCEEEEEcCCCC
Confidence 111111111 1222 256667777653 348899998876554322221111 1112 2246777777764
Q ss_pred ----CCcEEEEEcCCCceeeeecCCCc-ceeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 165 ----DGTLHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 165 ----dg~i~v~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
-..+.+||..+.+-...-..... .-.+++. -++.+++.|+ ..+.+||+++.+
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 23589999887653322111111 1112222 2566666665 347788887654
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.01 E-value=0.056 Score=39.48 Aligned_cols=181 Identities=10% Similarity=0.004 Sum_probs=91.3
Q ss_pred eeEEEeccceEEEEecCcceeee-eeeccCCc--eEEEcCCCCEEEEEec-----C------CeEEEEeccCCCCCCcee
Q 026679 28 SFMSGSLDHSVRIWDLRVNACQG-ILRLRGRP--TVAFDQQGLVFAVAME-----A------GAIKLFDSRSYDKGPFDT 93 (235)
Q Consensus 28 ~l~s~~~d~~i~vwd~~~~~~~~-~~~~~~~~--~~~~~~~~~~l~~~~~-----d------g~v~i~d~~~~~~~~~~~ 93 (235)
+++.|+ ..+.+||..+++-.. .+..+... ..+...++.+++.|+. . ..+..||..+.+.....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~- 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP- 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC-
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC-
Confidence 344555 468899998876332 11111111 2344457888888874 1 12677887765421110
Q ss_pred EeecCCCcceeEEEEccCCCeEEEecCC--------CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCC-
Q 026679 94 FLVGGDTAEVCDIKFSNDGKSMLLTTTN--------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG- 164 (235)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 164 (235)
.+....... +++. -++..++.|+.+ ..+.+||..+.+....-...... ....+...+++.++.|+.
T Consensus 84 -~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~ 158 (315)
T 4asc_A 84 -PLPSPRCLF-GLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV--YGHTVLSHMDLVYVIGGKG 158 (315)
T ss_dssp -CBSSCEESC-EEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCBC
T ss_pred -CCCcchhce-eEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc--cceeEEEECCEEEEEeCCC
Confidence 011111111 1222 256666666632 45999999887654332222211 111222346677778776
Q ss_pred C-----CcEEEEEcCCCceeeeecCCCcc-eeEEEeecCCCEEEEcc-------cceEEeeCCCCC
Q 026679 165 D-----GTLHAWNINTRNEVACWNGNIGV-VACLKWAPRRAMFVAAS-------SVLSFWIPNPSS 217 (235)
Q Consensus 165 d-----g~i~v~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-------~~i~iw~~~~~~ 217 (235)
+ ..+.+||..+.+-...-...... -.++. .-++++++.|+ ..+.+||+++.+
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCeEEECCCCCCchhceEEE-EECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 2 45899998776433221111111 11222 22666766665 247788887653
No 337
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.99 E-value=0.062 Score=39.65 Aligned_cols=186 Identities=10% Similarity=0.132 Sum_probs=95.3
Q ss_pred ccceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec----cCC--ceEEEcCCCCEEEEEecCCeEEEEeccCCC
Q 026679 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL----RGR--PTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 87 (235)
Q Consensus 14 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----~~~--~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~ 87 (235)
...+.++.|.+++..++ ++.+|.|. ...+.++.=..... ... ..+.+++ +. +++++..+.+.. ....++
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 35788999887666666 45567653 33333322111111 121 2366765 44 444556665443 222222
Q ss_pred CCCceeEee-cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCC
Q 026679 88 KGPFDTFLV-GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 166 (235)
Q Consensus 88 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (235)
. ...... ......+..+.+.+++..++++ .++.|..- ...++.-.... ......+..+.+.|++.+++.+...+
T Consensus 110 t--W~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~-~~~~~~~~~~~~~~~~~~~~~g~~G~ 184 (327)
T 2xbg_A 110 S--WSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALV-QEAIGVMRNLNRSPSGEYVAVSSRGS 184 (327)
T ss_dssp S--CEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEE-CSCCCCEEEEEECTTSCEEEEETTSS
T ss_pred C--ceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEee-cCCCcceEEEEEcCCCcEEEEECCCc
Confidence 1 111111 1123456777777777655554 45544321 12233222222 22334588899999998887775443
Q ss_pred cEEEEEc--CCCceeeeecCCCcceeEEEeecCCCEEEEcc-cceEEe
Q 026679 167 TLHAWNI--NTRNEVACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFW 211 (235)
Q Consensus 167 ~i~v~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw 211 (235)
..+-.|- .+.+.+. ......+..+.+.+++..++.+. +.+++.
T Consensus 185 ~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEe
Confidence 3333342 2233332 23445788899999988877765 556555
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.94 E-value=0.17 Score=44.07 Aligned_cols=93 Identities=11% Similarity=0.132 Sum_probs=60.2
Q ss_pred cEEEEEcCCCceeeeeccCCCCCcceeeE---EeCC-CcEEEEeC----------CCCcEEEEEcCCCceeeee-cCCCc
Q 026679 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTPD-GQYVVSGS----------GDGTLHAWNINTRNEVACW-NGNIG 187 (235)
Q Consensus 123 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~---~~~~-~~~l~~~~----------~dg~i~v~d~~~~~~~~~~-~~~~~ 187 (235)
.|++.|..+.+.+..+.+...+ .+.+++ |..+ ..+|++|+ ..|.|++|++.+++..... ....+
T Consensus 808 ~i~lidp~t~~~i~~~~l~~nE-~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQFLQNE-YALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEETTTCCEEEEEECCTTE-EEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEeCCCCeEEEEEeCCCCc-ceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 4778888888877777776553 344444 3322 46888775 3578999999744332211 12356
Q ss_pred ceeEEEeecCCCEEEEcccceEEeeCCCCC
Q 026679 188 VVACLKWAPRRAMFVAASSVLSFWIPNPSS 217 (235)
Q Consensus 188 ~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~ 217 (235)
+|++++-- +|+++++.+..+++|++...+
T Consensus 887 ~v~al~~~-~g~Lla~ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 887 AVYSMVEF-NGKLLASINSTVRLYEWTTEK 915 (1158)
T ss_dssp CEEEEEEE-TTEEEEEETTEEEEEEECTTS
T ss_pred cCEEEeee-CCEEEEEcCCEEEEEECCCCc
Confidence 78887744 566666667889999997543
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.60 E-value=0.13 Score=37.91 Aligned_cols=161 Identities=10% Similarity=0.120 Sum_probs=98.2
Q ss_pred cceeEEEeecCCCeeEEEec-------cceEEEEecCcceeeeeeeccCCceEEEcCCC-----CEEEEEecC---CeEE
Q 026679 15 ERVISLCMSPVNDSFMSGSL-------DHSVRIWDLRVNACQGILRLRGRPTVAFDQQG-----LVFAVAMEA---GAIK 79 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~d---g~v~ 79 (235)
..|..-..+++.++++..+- .|.+.+|..+. +..+.+++|...-..+-.+| .+++.+... +.++
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 230 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 230 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 45666777888888664432 46788888754 34445555544333333332 244444432 5889
Q ss_pred EEeccCC--CCCCceeE--e--e--cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeE
Q 026679 80 LFDSRSY--DKGPFDTF--L--V--GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEAT 151 (235)
Q Consensus 80 i~d~~~~--~~~~~~~~--~--~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 151 (235)
+.++... ..++.... . + .......-++..++.-..++.-+.-|.|++||+.++.++..-+..... |...+
T Consensus 231 IiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~--iF~ta 308 (365)
T 2xzh_A 231 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET--IFVTA 308 (365)
T ss_dssp EEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEE
T ss_pred EEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc--eEEec
Confidence 9988553 11111111 1 1 112334556888888888999999999999999999998877665543 55455
Q ss_pred EeCCCcEEEEeCCCCcEEEEEcCCCce
Q 026679 152 FTPDGQYVVSGSGDGTLHAWNINTRNE 178 (235)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~v~d~~~~~~ 178 (235)
.+.+..-++.....|.+.-..++..+.
T Consensus 309 ~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 309 PHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred ccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 555544555556777777666655443
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.49 E-value=0.33 Score=43.11 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=58.8
Q ss_pred eecCCCeeEEEeccceEEEEecCcceeeeeeeccCCce-EEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEeec--C
Q 026679 22 MSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG--G 98 (235)
Q Consensus 22 ~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~--~ 98 (235)
.+|..+.+|.= ...++.|+|+++.+.++.+......+ ..|-....+-+++ +..|..|++.... .|...+... -
T Consensus 73 MnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT--~~aVyHW~~~~~s-~P~k~fdR~~~L 148 (1630)
T 1xi4_A 73 MNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT--DNAVYHWSMEGES-QPVKMFDRHSSL 148 (1630)
T ss_pred cCCCcceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc--CCeEEEeccCCCC-ccHHHHhcchhc
Confidence 46665555544 36789999999998888877755433 5555444333332 4579999996522 222111111 0
Q ss_pred CCcceeEEEEccCCCeEEEec-------CCCcEEEEEc
Q 026679 99 DTAEVCDIKFSNDGKSMLLTT-------TNNNIYVLDA 129 (235)
Q Consensus 99 ~~~~v~~~~~~~~~~~l~~~~-------~d~~i~~~d~ 129 (235)
....|..-..+++.++++..+ -.|.+.+|..
T Consensus 149 ~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~ 186 (1630)
T 1xi4_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 186 (1630)
T ss_pred ccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeec
Confidence 124455555666666655432 2355666654
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.25 E-value=0.089 Score=41.68 Aligned_cols=103 Identities=15% Similarity=0.029 Sum_probs=65.4
Q ss_pred cceeEEEEccCCCeEEEecC-CCcEEEEEcCCC------ce-----eeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcE
Q 026679 101 AEVCDIKFSNDGKSMLLTTT-NNNIYVLDAYGG------EK-----RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTL 168 (235)
Q Consensus 101 ~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~------~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 168 (235)
.....+..+|||+++++++. +.++.++|.+.- +. ...-..... -.....+|.++|.-..+-.-|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-lGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-LGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-SCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-CcccEEEECCCCceEeeeeecceE
Confidence 34457889999999888776 888999998742 11 001111122 234678999999766777789999
Q ss_pred EEEEcCCC----------ceeeeecCCCcceeEEE------eecCCCEEEEcc
Q 026679 169 HAWNINTR----------NEVACWNGNIGVVACLK------WAPRRAMFVAAS 205 (235)
Q Consensus 169 ~v~d~~~~----------~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~ 205 (235)
.-|++... ..+..+..|-.+ -.+. -.|+|++|++..
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 99998643 233344434222 2222 246788888774
No 342
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.05 E-value=0.35 Score=37.22 Aligned_cols=161 Identities=11% Similarity=0.131 Sum_probs=100.1
Q ss_pred cceeEEEeecCCCeeEEEe-------ccceEEEEecCcceeeeeeeccCCceEEEcCCC-----CEEEEEecC---CeEE
Q 026679 15 ERVISLCMSPVNDSFMSGS-------LDHSVRIWDLRVNACQGILRLRGRPTVAFDQQG-----LVFAVAMEA---GAIK 79 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~-------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~~d---g~v~ 79 (235)
..|..-..+++.++++..+ -.|.+.+|..+. +..+.+.+|...-..+-.+| .+++.+... +.++
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 4566777788888876443 247788888754 34455555544333333332 245555443 7899
Q ss_pred EEeccCC--CCCCceeEee------cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeE
Q 026679 80 LFDSRSY--DKGPFDTFLV------GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEAT 151 (235)
Q Consensus 80 i~d~~~~--~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~ 151 (235)
+.++... ...+...... ........++..++.-..++..+.-|.|++||+.++.++..-+..... |...+
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~--iF~t~ 307 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET--IFVTA 307 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEE
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCc--eEEec
Confidence 9998653 1111111111 112334556888888888999999999999999999998777665543 55555
Q ss_pred EeCCCcEEEEeCCCCcEEEEEcCCCce
Q 026679 152 FTPDGQYVVSGSGDGTLHAWNINTRNE 178 (235)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~v~d~~~~~~ 178 (235)
.+....-++.....|.|.-..+.....
T Consensus 308 ~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 308 PHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred ccCCCCcEEEEccCceEEEEEEccccc
Confidence 555555566666788777666655443
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.03 E-value=0.42 Score=37.99 Aligned_cols=181 Identities=10% Similarity=0.119 Sum_probs=103.1
Q ss_pred eEEEeccceEEEEecCcceeeeeeeccC-----------------------------CceEEEcC---CCCEEEEEec-C
Q 026679 29 FMSGSLDHSVRIWDLRVNACQGILRLRG-----------------------------RPTVAFDQ---QGLVFAVAME-A 75 (235)
Q Consensus 29 l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----------------------------~~~~~~~~---~~~~l~~~~~-d 75 (235)
|.||+..|.|+|+-+.+++.+..+..-. .+.+.+.. ||++|+.-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 7899999999999998888776654211 11133322 5677777664 5
Q ss_pred CeEEEEeccCCCCCCceeEeecCCCcceeEEEEc--cCCCeEEEecC-------CCcE------------EEEEcCCCce
Q 026679 76 GAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFS--NDGKSMLLTTT-------NNNI------------YVLDAYGGEK 134 (235)
Q Consensus 76 g~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------d~~i------------~~~d~~~~~~ 134 (235)
..|...++...+. ...........+..+.|. |+..++++++. ||.. ...|..+.+.
T Consensus 153 ~RvAri~l~~~~~---d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v 229 (638)
T 3sbq_A 153 SRVARIRLDIMKC---DKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEM 229 (638)
T ss_dssp TEEEEEETTTTEE---EEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSE
T ss_pred cceEEEECCcEee---ceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEE
Confidence 6777778777553 122233455667777776 67777777654 2221 1122222222
Q ss_pred eeeeccCCCCCcceeeEEeCCCcEEEEeCCCC---------------cEEEEEcC-------------------------
Q 026679 135 RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG---------------TLHAWNIN------------------------- 174 (235)
Q Consensus 135 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------------~i~v~d~~------------------------- 174 (235)
........ ....+...++|++.++.+.+. .+.+++++
T Consensus 230 ~~Qv~v~g---nld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~ 306 (638)
T 3sbq_A 230 AFQVIVDG---NLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGR 306 (638)
T ss_dssp EEEEEESS---CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECS
T ss_pred EEEEEcCC---ChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccc
Confidence 22222221 133355677777776654221 25555542
Q ss_pred C----CceeeeecCCCcceeEEEeecCCCEEEEcc---cceEEeeCCC
Q 026679 175 T----RNEVACWNGNIGVVACLKWAPRRAMFVAAS---SVLSFWIPNP 215 (235)
Q Consensus 175 ~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~i~iw~~~~ 215 (235)
. +..+..+-.-......+..+|||++++.++ .++.+++++.
T Consensus 307 ~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 307 KKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp CBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred cccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh
Confidence 2 111111111123456789999999999998 6699999873
No 344
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.65 E-value=1 Score=39.45 Aligned_cols=193 Identities=14% Similarity=0.069 Sum_probs=101.9
Q ss_pred ccceeEEEeecC------CCeeEEEec-cceEEEEecCcceeeeeeeccC--Cc-eEEEc--CCCCEEEEEecCCeEEEE
Q 026679 14 KERVISLCMSPV------NDSFMSGSL-DHSVRIWDLRVNACQGILRLRG--RP-TVAFD--QQGLVFAVAMEAGAIKLF 81 (235)
Q Consensus 14 ~~~v~~~~~~~~------~~~l~s~~~-d~~i~vwd~~~~~~~~~~~~~~--~~-~~~~~--~~~~~l~~~~~dg~v~i~ 81 (235)
...|.|+++.|. +++++.|.+ |++++|+++.+.+.+....... .+ .+.+. ....+|.+|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999863 368899987 9999999998766554443322 21 12221 234578899999998777
Q ss_pred eccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcc-eeeEEeCC--CcE
Q 026679 82 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTN-TEATFTPD--GQY 158 (235)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i-~~~~~~~~--~~~ 158 (235)
.+..............-...++.-..+...+..-+.+..+....+|.-. ++... ...... .+ ....|+.. ..-
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~-s~l~~~--~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVF-SNVNLK--EVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEE-EEBSSS--CCCEEEEECCSSSTTE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEE-eccChH--HhceEeccCcccCCCc
Confidence 6543221111111111113344444444444333333334444445433 32221 112111 12 22345332 223
Q ss_pred EEEeCCCCcEEEEEcCCCcee--eeecCCCcceeEEEeecCCCEEEEcccceEEee
Q 026679 159 VVSGSGDGTLHAWNINTRNEV--ACWNGNIGVVACLKWAPRRAMFVAASSVLSFWI 212 (235)
Q Consensus 159 l~~~~~dg~i~v~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~ 212 (235)
++..+ ++.++|..+.+.+.. ..+. -...+..++++|+.+.++.+...-..++
T Consensus 709 ~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~ 762 (1158)
T 3ei3_A 709 LALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQD 762 (1158)
T ss_dssp EEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEEC
T ss_pred EEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccc
Confidence 44333 345999887654332 2222 3457899999998887776653333333
No 345
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.41 E-value=0.57 Score=34.95 Aligned_cols=68 Identities=9% Similarity=0.061 Sum_probs=45.7
Q ss_pred cceeeEEeC-------CCcEEEEeCCCCcEEEEEcCCCceeee--e-cCCCcceeEEEeecCCCEEEEcc-cceEEeeC
Q 026679 146 TNTEATFTP-------DGQYVVSGSGDGTLHAWNINTRNEVAC--W-NGNIGVVACLKWAPRRAMFVAAS-SVLSFWIP 213 (235)
Q Consensus 146 ~i~~~~~~~-------~~~~l~~~~~dg~i~v~d~~~~~~~~~--~-~~~~~~v~~~~~~~~~~~l~~~~-~~i~iw~~ 213 (235)
.+..+.|.. +|+++++....+.|...++..++.... + ......+..+++.|||.++++.. ..-+||.+
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEE
Confidence 355677753 477777777788888888876543322 2 22235789999999999877654 55566665
No 346
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.31 E-value=0.71 Score=35.91 Aligned_cols=106 Identities=15% Similarity=0.172 Sum_probs=54.4
Q ss_pred eEEEcCCCC-EEEEEecCCeEEEEeccCCC-CCCceeE---eec----CCCcceeEEEEccC----CCeEEEecC--C--
Q 026679 59 TVAFDQQGL-VFAVAMEAGAIKLFDSRSYD-KGPFDTF---LVG----GDTAEVCDIKFSND----GKSMLLTTT--N-- 121 (235)
Q Consensus 59 ~~~~~~~~~-~l~~~~~dg~v~i~d~~~~~-~~~~~~~---~~~----~~~~~v~~~~~~~~----~~~l~~~~~--d-- 121 (235)
.++|.|++. .++++...|.|++++..... ....... ... ........++|+|+ +...++-+. +
T Consensus 18 ~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~ 97 (463)
T 2wg3_C 18 GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERW 97 (463)
T ss_dssp EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSS
T ss_pred EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCc
Confidence 378888875 45556677888888643221 1111110 000 11346778899885 333333221 1
Q ss_pred --------CcEEEEEcCCC----------ceeeeeccCCCCCcceeeEEeCCCcEEEEeCC
Q 026679 122 --------NNIYVLDAYGG----------EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 164 (235)
Q Consensus 122 --------~~i~~~d~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 164 (235)
..|.-|.+..+ +.+..............++|.|||.+.++.+.
T Consensus 98 ~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 98 AIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred ccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 14555665421 12222221122233678999999987776554
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.03 E-value=0.06 Score=39.92 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=65.7
Q ss_pred CEEEEEecCCeEEEEeccCCCCCCceeEeecCC-CcceeEEEE--c-cCCCeEEEe-cCCCcEEEEEcCCCceeeeeccC
Q 026679 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKF--S-NDGKSMLLT-TTNNNIYVLDAYGGEKRCGFSLE 141 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~-~~~v~~~~~--~-~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~ 141 (235)
..+++++.||.+.-+|..+++. ....... ..++....- . .++..++.. +.||.|+.++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~----~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHI----IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEE----EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcE----EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 4688888899999888877654 2222211 011111100 0 123333333 58999999998887554333322
Q ss_pred C--CCCcceeeEEe-----------CCCcEEEEeCCCCcEEEEEcCCCceeeeec
Q 026679 142 P--SPNTNTEATFT-----------PDGQYVVSGSGDGTLHAWNINTRNEVACWN 183 (235)
Q Consensus 142 ~--~~~~i~~~~~~-----------~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 183 (235)
. ...+ +... ..+..+++|+.+|.+...|+++|+.+..+.
T Consensus 87 ~lv~~SP---~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 87 QLVSTSP---LHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHHTTCS---EEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred cceeccc---cccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1 0011 2211 145678899999999999999999988775
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.88 E-value=1.4 Score=36.55 Aligned_cols=198 Identities=14% Similarity=0.072 Sum_probs=108.7
Q ss_pred cceeEEEeecCCCeeEEEeccceEEEEecCcce--eeeeeec-------cCCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 15 ERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA--CQGILRL-------RGRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 15 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~-------~~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
..|.++.-..+|.+ ..|+.+| +..++..++. ....+.. ....+ +.-..++.+ ..|+ ++-+..||.
T Consensus 324 ~~v~~i~~D~~g~l-WiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt-~~GL~~~~~ 399 (758)
T 3ott_A 324 NQFYSLFRDSKGFY-WFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQL-WIAT-DGSINRYDY 399 (758)
T ss_dssp CBEEEEEECTTCCE-EEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCE-EEEE-TTEEEEEET
T ss_pred ceEEEEEEcCCCCE-EEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCE-EEEe-CCcHhhcCc
Confidence 45777777666654 4444555 5566654432 1111211 11123 444556654 4455 457888988
Q ss_pred cCCCCCCceeEeecC-----CCcceeEEEEccCCCeEEEecCCCcEEEEEcCCC-----cee---eeecc--CCCCCcce
Q 026679 84 RSYDKGPFDTFLVGG-----DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG-----EKR---CGFSL--EPSPNTNT 148 (235)
Q Consensus 84 ~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-----~~~---~~~~~--~~~~~~i~ 148 (235)
.+... ....... ....|.++...++++ |..|+..+-+..+|..+. ... ..+.. .-....|.
T Consensus 400 ~~~~~---~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 475 (758)
T 3ott_A 400 ATRQF---IHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFIN 475 (758)
T ss_dssp TTTEE---EEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEE
T ss_pred CCCcE---EEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceecccccccccccccceee
Confidence 76432 1111111 124577777777765 666776666888886421 111 11111 11123488
Q ss_pred eeEEeCCCcEEE-EeCCCCcEEEEEcCCCceeeeecC---CCcceeEEEeecCCCEEEEcccceEEeeCCCCCCCCC
Q 026679 149 EATFTPDGQYVV-SGSGDGTLHAWNINTRNEVACWNG---NIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNSTD 221 (235)
Q Consensus 149 ~~~~~~~~~~l~-~~~~dg~i~v~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~~~~~~~ 221 (235)
++...++|++-+ .++..| |..+|..+++....... ....+.++....+|.+.++..+-+..++.+......+
T Consensus 476 ~i~~d~~g~lWi~~~t~~G-l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~ 551 (758)
T 3ott_A 476 QIIPDNEGNVWVLLYNNKG-IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGGVMRINPKDESQQSI 551 (758)
T ss_dssp EEEECTTSCEEEEETTCSS-EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEETTEEEEECC--CCCCBC
T ss_pred eEEEcCCCCEEEEccCCCC-cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEecCceEEEecCCCceEEe
Confidence 888888888665 355544 88899876654332111 1245778888888888877666688888776654443
No 349
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=94.75 E-value=0.97 Score=34.11 Aligned_cols=169 Identities=11% Similarity=0.155 Sum_probs=92.5
Q ss_pred eEEEEecCcc--eeeeeeeccCC--------ceEEEc---CC----CCEEEEEe-cCCeEEEEeccCCCCCCce------
Q 026679 37 SVRIWDLRVN--ACQGILRLRGR--------PTVAFD---QQ----GLVFAVAM-EAGAIKLFDSRSYDKGPFD------ 92 (235)
Q Consensus 37 ~i~vwd~~~~--~~~~~~~~~~~--------~~~~~~---~~----~~~l~~~~-~dg~v~i~d~~~~~~~~~~------ 92 (235)
.|.+||+.++ +.++.+..+.. ..+++. |. +.++..+. ..+-+.++|+.+++.....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5889999999 88888876431 115555 22 33444444 4678999998875531111
Q ss_pred ----eEeecCC----CcceeEEEEccC----CCeEEEecCCC-cEEEEE---cCCCce---eeeeccCCCCCcceeeEEe
Q 026679 93 ----TFLVGGD----TAEVCDIKFSND----GKSMLLTTTNN-NIYVLD---AYGGEK---RCGFSLEPSPNTNTEATFT 153 (235)
Q Consensus 93 ----~~~~~~~----~~~v~~~~~~~~----~~~l~~~~~d~-~i~~~d---~~~~~~---~~~~~~~~~~~~i~~~~~~ 153 (235)
.+...+. ...+..++++|+ ++.|....-.+ .++-.. ++.... ++.+-..+....-..++++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 1111111 246778899987 66666655443 233322 222221 1111111111223345675
Q ss_pred -CCCcEEEEeCCCCcEEEEEcCC-C---ceeeeec-C-CCcceeEEEeecCCCEEEEcc
Q 026679 154 -PDGQYVVSGSGDGTLHAWNINT-R---NEVACWN-G-NIGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 154 -~~~~~l~~~~~dg~i~v~d~~~-~---~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~ 205 (235)
.+|.++++--....|..|+..+ . +....+. . .-..+..+.+.++|.+.+.++
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred CCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 5788888888888999999865 1 1122221 1 223467777777776655554
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.02 E-value=2.3 Score=38.13 Aligned_cols=169 Identities=9% Similarity=0.139 Sum_probs=93.3
Q ss_pred hhhhhhccc----ccceeEEEeecCCCeeEEEe-------ccceEEEEecCcceeeeeeeccCCceEEEc----C-CCCE
Q 026679 5 RILRYFKGH----KERVISLCMSPVNDSFMSGS-------LDHSVRIWDLRVNACQGILRLRGRPTVAFD----Q-QGLV 68 (235)
Q Consensus 5 ~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~-------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~----~-~~~~ 68 (235)
.+++.|..| ...|..-..+++.++++..| -.|.+.+|..+.+ ..+.+.+|...-..+- + ...+
T Consensus 137 ~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l 215 (1630)
T 1xi4_A 137 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTL 215 (1630)
T ss_pred ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceE
Confidence 455556555 35677777788888876433 3477888887543 3334444433221111 1 1223
Q ss_pred EEEEec---CCeEEEEeccCC-CC-CCceeE----ee--cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeee
Q 026679 69 FAVAME---AGAIKLFDSRSY-DK-GPFDTF----LV--GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCG 137 (235)
Q Consensus 69 l~~~~~---dg~v~i~d~~~~-~~-~~~~~~----~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 137 (235)
++.+.. .+.+++-++... .. ++.... .+ ........++..++.-..+...+.-|.+.+||+.++..+..
T Consensus 216 ~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 333332 268888888553 11 111100 01 11123344677888777888899999999999999988765
Q ss_pred eccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCC
Q 026679 138 FSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176 (235)
Q Consensus 138 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~ 176 (235)
-.....+ |...+.++...-++.....|.|.-..+...
T Consensus 296 ~ris~~~--iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~ 332 (1630)
T 1xi4_A 296 NRISGET--IFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (1630)
T ss_pred ccccCCc--eEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence 5544432 433333333333444446666555555443
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.89 E-value=1.2 Score=31.95 Aligned_cols=183 Identities=10% Similarity=0.041 Sum_probs=87.1
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEe
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL 95 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 95 (235)
.|..++...+ ..++. . ||.|..|-....-.+..-..-...+..+.......+.-. +|.+..|-...........
T Consensus 64 ~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~-- 137 (282)
T 3qhy_B 64 GVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPA-- 137 (282)
T ss_dssp CCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCG--
T ss_pred CEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCc--
Confidence 4555554422 12222 3 777777765432111110000112333333333344444 8888888665432211111
Q ss_pred ecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCC
Q 026679 96 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175 (235)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 175 (235)
.....|..++.-.+ +.++-. ||.|+.|-......+.. +.. ....|..++...+. .++. .||.++.|-...
T Consensus 138 --~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~-p~~-~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 138 --EAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTV-PAE-AQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNR 207 (282)
T ss_dssp --GGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSC-CGG-GGSSEEEEEECSSE-EEEE--ETTEEEEEECCT
T ss_pred --cCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCC-cee-cCCCeEEEEecCCE-EEEE--ECCeEEEEECCC
Confidence 11234665554432 233333 78899887654322211 000 11336555554432 2333 589999997654
Q ss_pred CceeeeecCCCcceeEEEeecCCCEEEEcccceEEeeCCC
Q 026679 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNP 215 (235)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~ 215 (235)
.-.+..-......|..++........++ ++.+..|-.+.
T Consensus 208 ~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 208 YKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIAWGSSR 246 (282)
T ss_dssp TSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEEESTTC
T ss_pred CCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEEecCCC
Confidence 3222211112235777776666666666 77788886654
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.75 E-value=1.9 Score=33.57 Aligned_cols=106 Identities=9% Similarity=-0.013 Sum_probs=56.8
Q ss_pred cceeEEEeecCCC-eeEEEeccceEEEEecCcce---eeeeee---c-------cCCc-eEEEcCC----CCEEEEEecC
Q 026679 15 ERVISLCMSPVND-SFMSGSLDHSVRIWDLRVNA---CQGILR---L-------RGRP-TVAFDQQ----GLVFAVAMEA 75 (235)
Q Consensus 15 ~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~---~~~~~~---~-------~~~~-~~~~~~~----~~~l~~~~~d 75 (235)
..-+.|+|.|+|. .|+.+...|.|++++..... .+..+. . .... -++++|+ +.+.++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999986 56666778999999753221 111111 0 1111 2899985 4444443321
Q ss_pred ------------CeEEEEeccCCCCC------CceeEee--cCCCcceeEEEEccCCCeEEEecC
Q 026679 76 ------------GAIKLFDSRSYDKG------PFDTFLV--GGDTAEVCDIKFSNDGKSMLLTTT 120 (235)
Q Consensus 76 ------------g~v~i~d~~~~~~~------~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~ 120 (235)
..|.-|.+...... ....+.. .........|+|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 13444665432110 1111111 122344678999999987776554
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.52 E-value=1.1 Score=38.36 Aligned_cols=38 Identities=24% Similarity=0.421 Sum_probs=32.9
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeee
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR 53 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 53 (235)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56777778888899999999999999999999887764
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.28 E-value=3 Score=29.92 Aligned_cols=183 Identities=9% Similarity=-0.031 Sum_probs=90.0
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCCCEEEEEecCCeEEEEeccCCCCCCceeEe
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL 95 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~~~~~~~ 95 (235)
.|..++... .+.+.-. ||.|+.|-....-.+..-......+..+.......+.-. ||.+..|-...........
T Consensus 25 ~i~~ia~G~--~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~-- 98 (282)
T 3qhy_B 25 GVDAIAGGY--FHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPA-- 98 (282)
T ss_dssp SCCEEEECS--SEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCG--
T ss_pred CCcEEEeCC--CeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCc--
Confidence 566666543 3333335 899999976543221110011112222222222222224 8999998765432211111
Q ss_pred ecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCC
Q 026679 96 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175 (235)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~ 175 (235)
.....|..++...+ +.++.. +|.|+.|-......+.. .. .....|..++...+...+ -. ||.++.|-...
T Consensus 99 --~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~-~~-~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 99 --EARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV-PA-EAQSGVTALDGGVYTALA--VK-NGGVIAWGDNY 168 (282)
T ss_dssp --GGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-CG-GGGSSEEEEEECSSEEEE--EE-TTEEEEEECCT
T ss_pred --ccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-Cc-cCCCCeEEEEcccCEEEE--EE-CCEEEEecCCC
Confidence 11235666665543 444445 99999997654322211 10 111336555554333222 23 68899997654
Q ss_pred CceeeeecCCCcceeEEEeecCCCEEEEcccceEEeeCCC
Q 026679 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNP 215 (235)
Q Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~~ 215 (235)
...+.........|..++...+...++ .++.+..|-.+.
T Consensus 169 ~gqlg~p~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~ 207 (282)
T 3qhy_B 169 FGQTTVPAEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNR 207 (282)
T ss_dssp TSTTSCCGGGGSSEEEEEECSSEEEEE-ETTEEEEEECCT
T ss_pred CCCCCCceecCCCeEEEEecCCEEEEE-ECCeEEEEECCC
Confidence 322221111234577776655544444 457788886543
No 355
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=91.01 E-value=4 Score=30.81 Aligned_cols=186 Identities=11% Similarity=0.100 Sum_probs=92.5
Q ss_pred CCeeEEEeccceEEEEecCcc-e----------eeeeeec-cCC--ceEEEcCCCCEEEEEecCCeEEEEeccCCCC---
Q 026679 26 NDSFMSGSLDHSVRIWDLRVN-A----------CQGILRL-RGR--PTVAFDQQGLVFAVAMEAGAIKLFDSRSYDK--- 88 (235)
Q Consensus 26 ~~~l~s~~~d~~i~vwd~~~~-~----------~~~~~~~-~~~--~~~~~~~~~~~l~~~~~dg~v~i~d~~~~~~--- 88 (235)
....+....||.|..|-.... + ....+.. ... ..++++......++-..+|.|..|-......
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 455566677899999964321 0 0111111 111 2256666667777778899999996433110
Q ss_pred ---CCcee-EeecC-CCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCce-----------eeeeccCCCCCcceeeEE
Q 026679 89 ---GPFDT-FLVGG-DTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEK-----------RCGFSLEPSPNTNTEATF 152 (235)
Q Consensus 89 ---~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-----------~~~~~~~~~~~~i~~~~~ 152 (235)
..... ..... ....|..++. ...+.++...+|.|+.|-...... ...... .....+..++.
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~-~~~~~v~~ia~ 218 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA-LQGHRVVDIAC 218 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGG-GTTSCEEEEEE
T ss_pred CCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecc-cCCCeEEEEEE
Confidence 00001 11111 1124544444 345566677899999997532110 000110 11123555554
Q ss_pred eCCCcEEEEeCCCCcEEEEEcCCCce-----------eeeecC-CCcceeEEEeecCCCEEEEcccceEEeeCC
Q 026679 153 TPDGQYVVSGSGDGTLHAWNINTRNE-----------VACWNG-NIGVVACLKWAPRRAMFVAASSVLSFWIPN 214 (235)
Q Consensus 153 ~~~~~~l~~~~~dg~i~v~d~~~~~~-----------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~ 214 (235)
.....+.++-..||.|+.|-....-. ...+.. ....|..++......+.++.++.+..|-.+
T Consensus 219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCC
Confidence 43334555666789999996532111 111111 112466666555544555555778887553
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.75 E-value=1.7 Score=38.11 Aligned_cols=38 Identities=24% Similarity=0.116 Sum_probs=31.7
Q ss_pred CcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeee
Q 026679 145 NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182 (235)
Q Consensus 145 ~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 182 (235)
..+.+++..++..++++-+.|+++++|++.+++++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 34556677788899999999999999999999887664
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=87.98 E-value=2.4 Score=34.10 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=41.6
Q ss_pred ceeeEEeCCCcEEEEeCCC------------CcEEEEEcCCCceeeeecCC-CcceeEEEeecCCCEEEEc
Q 026679 147 NTEATFTPDGQYVVSGSGD------------GTLHAWNINTRNEVACWNGN-IGVVACLKWAPRRAMFVAA 204 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~d------------g~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 204 (235)
.-.|+|+|.|++++.-..+ ..+.+.+..+++....+.++ ...++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3558999999977764432 24566676677765555544 4689999999999988776
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.37 E-value=17 Score=32.05 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=31.8
Q ss_pred ceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeecc
Q 026679 102 EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 140 (235)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 140 (235)
.+.+++..++..++++-+.|+++++|++.+++++....+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 344556667788999999999999999999998877654
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.22 E-value=13 Score=30.75 Aligned_cols=193 Identities=9% Similarity=0.024 Sum_probs=99.7
Q ss_pred eeEEE-eecCCCeeEE-Eec----cceEEEEecCcceeee-eeeccC-C--------ceEEEcCCCCEEEEEe-------
Q 026679 17 VISLC-MSPVNDSFMS-GSL----DHSVRIWDLRVNACQG-ILRLRG-R--------PTVAFDQQGLVFAVAM------- 73 (235)
Q Consensus 17 v~~~~-~~~~~~~l~s-~~~----d~~i~vwd~~~~~~~~-~~~~~~-~--------~~~~~~~~~~~l~~~~------- 73 (235)
...+. ++|++++++. -|. -..++++|+.+++.+. .+.... . ..++|..++..+++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34455 8899877553 333 3469999999988664 222111 1 3357764444444321
Q ss_pred ---cCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCe-----EEEec---CCCcEEEEEcCC--Cceeeeecc
Q 026679 74 ---EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKS-----MLLTT---TNNNIYVLDAYG--GEKRCGFSL 140 (235)
Q Consensus 74 ---~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~---~d~~i~~~d~~~--~~~~~~~~~ 140 (235)
....|+.|.+-+........+..... ..-.....++++++ +++.+ ....+++.|... ++.. .+..
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~ 288 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKE-YIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KINM 288 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTT-SCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-ECCS
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCC-ceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-Eeec
Confidence 12467888776654322223322222 22234455666663 33332 234567777653 3322 2222
Q ss_pred CCCCCcceeeEEeCCCcEEEEeC----------CCCcEEEEEcCCCc-------eeee-ec-CCCcceeEEEeecCCCEE
Q 026679 141 EPSPNTNTEATFTPDGQYVVSGS----------GDGTLHAWNINTRN-------EVAC-WN-GNIGVVACLKWAPRRAMF 201 (235)
Q Consensus 141 ~~~~~~i~~~~~~~~~~~l~~~~----------~dg~i~v~d~~~~~-------~~~~-~~-~~~~~v~~~~~~~~~~~l 201 (235)
... ..+..+.++.+++... ..+.|...|+.++. .... +. .....+..+.|..+ .++
T Consensus 289 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 289 PSD----ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp CTT----CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred CCc----ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 221 1133455666666432 36779999987642 1222 22 23446788888876 344
Q ss_pred EEcc----cceEEeeCCCC
Q 026679 202 VAAS----SVLSFWIPNPS 216 (235)
Q Consensus 202 ~~~~----~~i~iw~~~~~ 216 (235)
++.. ..+.++++.++
T Consensus 364 ~~~~~~~~~~l~~~~~~~g 382 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENE 382 (711)
T ss_dssp EEEEETTEEEEEEECEETT
T ss_pred EEEEECCEEEEEEEECCCC
Confidence 4443 34778877544
No 360
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.38 E-value=9.2 Score=28.18 Aligned_cols=161 Identities=9% Similarity=0.028 Sum_probs=90.4
Q ss_pred ccceeEEEeec---CCCeeEEEeccceEEEEecCcceee-----eeeecc-CCce--EEEcCCCCEEEEEecCCeEEEEe
Q 026679 14 KERVISLCMSP---VNDSFMSGSLDHSVRIWDLRVNACQ-----GILRLR-GRPT--VAFDQQGLVFAVAMEAGAIKLFD 82 (235)
Q Consensus 14 ~~~v~~~~~~~---~~~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~-~~~~--~~~~~~~~~l~~~~~dg~v~i~d 82 (235)
...|.++..-+ +...++..+.+|.++--.+...... ..+... .... +........++..+..|.+..+.
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 34555554433 4678999999999998887653221 111111 1222 33334556788888899988887
Q ss_pred cc--CCCCC-----CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCC-------ceeeeeccCCCCCcce
Q 026679 83 SR--SYDKG-----PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG-------EKRCGFSLEPSPNTNT 148 (235)
Q Consensus 83 ~~--~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-------~~~~~~~~~~~~~~i~ 148 (235)
.. .-... ......+. ....|.++...+++..++..+..|.++.-.+..- +-+..+.+......+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv 252 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLV 252 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEE
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEE
Confidence 76 32110 01112222 2345666666566678999999999988876321 2223333332223344
Q ss_pred eeEEeCCCcEEEEeCCCCcEEEEEcCC
Q 026679 149 EATFTPDGQYVVSGSGDGTLHAWNINT 175 (235)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~v~d~~~ 175 (235)
.+....+...++..+.+|.+.-++...
T Consensus 253 ~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 253 GALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 444444445666666777777776643
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=85.09 E-value=4.9 Score=32.37 Aligned_cols=59 Identities=24% Similarity=0.294 Sum_probs=41.1
Q ss_pred eeEEEEccCCCeEEEecCC------------CcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 103 VCDIKFSNDGKSMLLTTTN------------NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 103 v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
.-.|.|+|.|++++.-..+ ..+.+.+..+++....+..+ ....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 4578999999865554322 24666777777766555543 44679999999999988765
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=84.79 E-value=9.5 Score=27.84 Aligned_cols=188 Identities=12% Similarity=0.034 Sum_probs=99.6
Q ss_pred cCCCeeEEEeccceEEEEecCcceeee-------ee--eccCCce-EEEcCCCCEEEEEecCCeEEEEeccCCCCC----
Q 026679 24 PVNDSFMSGSLDHSVRIWDLRVNACQG-------IL--RLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKG---- 89 (235)
Q Consensus 24 ~~~~~l~s~~~d~~i~vwd~~~~~~~~-------~~--~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~~~~~~---- 89 (235)
++...+++.+.+|.|+--.+...+... .+ +...... +........++..+..|.++-+....-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 456788899999999987765432211 11 1111111 233334556777788888877765432110
Q ss_pred ---Cc-eeEeecCCCcceeEEEEcc---CCCeEEEecCCCcEEEEEcCCC-----ceeeeeccCCCCCcceeeEEeCCCc
Q 026679 90 ---PF-DTFLVGGDTAEVCDIKFSN---DGKSMLLTTTNNNIYVLDAYGG-----EKRCGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 90 ---~~-~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
+. ....+.. ...+..+...+ +..+++..+..|.++...+..- .-...+.+.. ...+..+....+..
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 00 0111222 23344443332 4567888999999998887421 2222334443 24455555555566
Q ss_pred EEEEeCCCCcEEEEEcCCCc---------eeeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeCC
Q 026679 158 YVVSGSGDGTLHAWNINTRN---------EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214 (235)
Q Consensus 158 ~l~~~~~dg~i~v~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~~ 214 (235)
.++..+.+|.+..+....-. ....+.. ...|..+..-+++..++..+ |..+...++
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 78888899998888875321 1222222 34455555444444343333 666666553
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=84.60 E-value=5.5 Score=32.88 Aligned_cols=29 Identities=10% Similarity=0.395 Sum_probs=25.2
Q ss_pred CCcEEEEeCCCCcEEEEEcCCCceeeeec
Q 026679 155 DGQYVVSGSGDGTLHAWNINTRNEVACWN 183 (235)
Q Consensus 155 ~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 183 (235)
+..++++-+.|..+|+|++++++++.+..
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 57799999999999999999998776653
No 364
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.91 E-value=7 Score=31.37 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=42.3
Q ss_pred cceeeEEeCCCcEEEEeCC------------CCcEEEEEcCCCceeeeecCC-CcceeEEEeecCCCEEEEcc
Q 026679 146 TNTEATFTPDGQYVVSGSG------------DGTLHAWNINTRNEVACWNGN-IGVVACLKWAPRRAMFVAAS 205 (235)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~------------dg~i~v~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 205 (235)
....+.|+++|.+.+.... ...+..++..+++....+... ...++.++|+||++.|.++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3567899999987773321 225777777777765555433 35789999999999988774
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.41 E-value=2.4 Score=34.88 Aligned_cols=37 Identities=11% Similarity=0.144 Sum_probs=30.1
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCcceeeeeeec
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL 54 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 54 (235)
.|.++.+ +..++++-+.|.++|+||+++++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555544 367999999999999999999998877765
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.17 E-value=9 Score=30.75 Aligned_cols=60 Identities=27% Similarity=0.344 Sum_probs=40.9
Q ss_pred ceeEEEEccCCCeEEEecC------------CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 102 EVCDIKFSNDGKSMLLTTT------------NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
....+.|.++|.+.+.... ...+..++..+++....+.. .....++.++|+||++.|++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-CCCccccCCEECCCCCEEEEE
Confidence 4567999999986663321 12577777777776554432 222458999999999988765
No 367
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.07 E-value=26 Score=30.19 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=33.0
Q ss_pred ceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeecc
Q 026679 102 EVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 140 (235)
Q Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 140 (235)
.+.+++..++..++++-+.|+++++|++.+++++....+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 456677777888999999999999999999998876554
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=79.91 E-value=17 Score=27.28 Aligned_cols=27 Identities=7% Similarity=0.033 Sum_probs=17.9
Q ss_pred ceeEEEEcc-C-CCeEEEecCCCcEEEEE
Q 026679 102 EVCDIKFSN-D-GKSMLLTTTNNNIYVLD 128 (235)
Q Consensus 102 ~v~~~~~~~-~-~~~l~~~~~d~~i~~~d 128 (235)
.|.++++.| + ...+.++...+.|...+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 577888887 2 55677776666665553
No 369
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=78.03 E-value=20 Score=27.00 Aligned_cols=196 Identities=14% Similarity=0.166 Sum_probs=96.6
Q ss_pred eeEEEeecCCCeeEEEeccceEEEEecCcce-----------eeeeee-ccCCceEEEcCCCCEEEEEecCCeEEEEecc
Q 026679 17 VISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-----------CQGILR-LRGRPTVAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 17 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~-----------~~~~~~-~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
+..++++....+.+....||.|+.|-....- ....+. .....+..+.......++-..+|.|..|-..
T Consensus 107 ~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n 186 (389)
T 3kci_A 107 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186 (389)
T ss_dssp EEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred eeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCC
Confidence 4445565555667777889999999643210 011111 1222445555556666677788999998653
Q ss_pred CCCC------CCcee-Eee-cCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee---------eeeccC-CCCCc
Q 026679 85 SYDK------GPFDT-FLV-GGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR---------CGFSLE-PSPNT 146 (235)
Q Consensus 85 ~~~~------~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---------~~~~~~-~~~~~ 146 (235)
.... ..... ... ......+..++......+.++...+|.|+.|-......+ ...... .....
T Consensus 187 ~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~ 266 (389)
T 3kci_A 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG 266 (389)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSC
T ss_pred CCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCc
Confidence 3110 00000 111 111234555655433356666778999999965321110 000111 01112
Q ss_pred ceeeEEeCCCcEEEEeCCCCcEEEEEcCCCce-----------eeeecC-CCcceeEEEeecCCCEEEEcccceEEeeCC
Q 026679 147 NTEATFTPDGQYVVSGSGDGTLHAWNINTRNE-----------VACWNG-NIGVVACLKWAPRRAMFVAASSVLSFWIPN 214 (235)
Q Consensus 147 i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-----------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~ 214 (235)
|..++... .+.++-..+|.|+.|-....-. ...+.. ....|..++.......+++..+.+..|=.+
T Consensus 267 v~~v~~G~--~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 267 VVKVECGS--QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp EEEEEEET--TEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTCCEEEEECC
T ss_pred EEEEeCCC--CEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeEEEECCCCCEEEeeCC
Confidence 44444433 3444446788899997532111 011111 123466665544433444444788888664
No 370
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=75.55 E-value=13 Score=29.66 Aligned_cols=68 Identities=10% Similarity=0.047 Sum_probs=42.6
Q ss_pred eeEEEEccCC--CeEEEecCCCcEEEEEcCCCc----eeeeeccCCCCCcce-eeEEeCCCcEEEEeCCCCcEEE
Q 026679 103 VCDIKFSNDG--KSMLLTTTNNNIYVLDAYGGE----KRCGFSLEPSPNTNT-EATFTPDGQYVVSGSGDGTLHA 170 (235)
Q Consensus 103 v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~v 170 (235)
.++++....+ ..++.|+.+|.|.-..+.... ....+.......+|. .|.+++++.+|++++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4555554433 346678889987666554321 233334433345675 8999999999999988765544
No 371
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=74.30 E-value=16 Score=28.79 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=42.4
Q ss_pred ceeEEEEcc----CCC--eEEEecCCCcEEEEEcCCCc--------eeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCc
Q 026679 102 EVCDIKFSN----DGK--SMLLTTTNNNIYVLDAYGGE--------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT 167 (235)
Q Consensus 102 ~v~~~~~~~----~~~--~l~~~~~d~~i~~~d~~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (235)
..++++... +++ .++.|+.+|.|.-.-+.... .+..+.......+|..|.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 356665543 233 46678888887555443221 1222333333467899999999999999998876
Q ss_pred EEE
Q 026679 168 LHA 170 (235)
Q Consensus 168 i~v 170 (235)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.54 E-value=29 Score=24.75 Aligned_cols=157 Identities=10% Similarity=0.047 Sum_probs=87.8
Q ss_pred ccceeEEEeec--CCCeeEEEeccceEEEEecCcce------eeeeeeccCCce-EEEcCCCCEEEEEecCCeEEEEecc
Q 026679 14 KERVISLCMSP--VNDSFMSGSLDHSVRIWDLRVNA------CQGILRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 14 ~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd~~~~~------~~~~~~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
...|..+.. + +...++..+.+|.++-..+..-. ..-.++...... +........++..+..|.+..++..
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 345655543 3 45789999999999998875532 111111111111 3333455678888899998888764
Q ss_pred CCCC-----CCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCC-------CceeeeeccCCCCCcceeeEE
Q 026679 85 SYDK-----GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG-------GEKRCGFSLEPSPNTNTEATF 152 (235)
Q Consensus 85 ~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~~~~i~~~~~ 152 (235)
.-.. .......+.. ...|..+...+++..++..+..|.++...+.. ++-...+ ...+.+..+..
T Consensus 146 eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i---~~~~~lv~~~~ 221 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS---GTKDTLVDLIP 221 (276)
T ss_dssp GSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC---CSSSCEEEEEE
T ss_pred hCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE---cCCCcEEEEEE
Confidence 4221 1111122222 34565555555667888999999998887642 1222222 12233444433
Q ss_pred eCCCcEEEEeCCCCcEEE--EEcCC
Q 026679 153 TPDGQYVVSGSGDGTLHA--WNINT 175 (235)
Q Consensus 153 ~~~~~~l~~~~~dg~i~v--~d~~~ 175 (235)
..+...++..+.+|.+.. ++...
T Consensus 222 ~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 222 IKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred eCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 334456666677777777 76543
No 373
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=63.85 E-value=39 Score=26.59 Aligned_cols=60 Identities=10% Similarity=0.159 Sum_probs=36.9
Q ss_pred CEEEEEecCCeEEEEeccCCC------CCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEE
Q 026679 67 LVFAVAMEAGAIKLFDSRSYD------KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYV 126 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 126 (235)
..++.|..+|.|.-.-+.... ..............+|..+.++++..+|++++.++.+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 457788888877544332211 111122233334578899999999999999988775544
No 374
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=63.67 E-value=39 Score=27.32 Aligned_cols=57 Identities=11% Similarity=0.010 Sum_probs=36.2
Q ss_pred eEEEecCCCcEEEEEcCCCc----e--eeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEE
Q 026679 114 SMLLTTTNNNIYVLDAYGGE----K--RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170 (235)
Q Consensus 114 ~l~~~~~d~~i~~~d~~~~~----~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 170 (235)
.++.|+.+|.|.-.-+.... . +..+.......+|..+.++++...|++++.++.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 46678888887654443222 1 122222223467899999999999998887765554
No 375
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=63.14 E-value=31 Score=28.38 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=36.4
Q ss_pred eEEEecCCCcEEEE-EcCCCc-------eeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEE
Q 026679 114 SMLLTTTNNNIYVL-DAYGGE-------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170 (235)
Q Consensus 114 ~l~~~~~d~~i~~~-d~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v 170 (235)
.++.|+.+|.|.-. ...... .+..+.......+|..|.++++.++|++++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 46678888887532 222211 1222333344567899999999999999998876554
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=61.24 E-value=49 Score=24.73 Aligned_cols=175 Identities=13% Similarity=0.024 Sum_probs=79.1
Q ss_pred cceeEEEeecC-CCeeEEEeccceEEEEecCcceeeeeeec---------------cCCceEEEcCC-CCEEEEEecCCe
Q 026679 15 ERVISLCMSPV-NDSFMSGSLDHSVRIWDLRVNACQGILRL---------------RGRPTVAFDQQ-GLVFAVAMEAGA 77 (235)
Q Consensus 15 ~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~---------------~~~~~~~~~~~-~~~l~~~~~dg~ 77 (235)
..|.+|.+.|. ...++.+..++.|...+ +.++.-..+.. .....++++|. ...++++...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 46789999884 34555555455444432 22222111110 11234777875 45666666544
Q ss_pred EEEEeccCCCCCCceeEeecCCC---cceeEEEEcc-CCCeEEEecC-----------CCcEEEEEcCCC-ceeeeec--
Q 026679 78 IKLFDSRSYDKGPFDTFLVGGDT---AEVCDIKFSN-DGKSMLLTTT-----------NNNIYVLDAYGG-EKRCGFS-- 139 (235)
Q Consensus 78 v~i~d~~~~~~~~~~~~~~~~~~---~~v~~~~~~~-~~~~l~~~~~-----------d~~i~~~d~~~~-~~~~~~~-- 139 (235)
|...+-..... ......... ..+..+.++| +...++++.. ++...+|....+ +.-..+.
T Consensus 255 l~~s~D~G~tW---~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~g 331 (394)
T 3b7f_A 255 IYRMDRREGVW---KRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRG 331 (394)
T ss_dssp EEEEETTTTEE---ECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBT
T ss_pred EEEeCCCCCcc---eECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCC
Confidence 43333111110 000000011 2356777876 3344555432 233445554442 2222221
Q ss_pred cCCCC----CcceeeEEeCC-CcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEee
Q 026679 140 LEPSP----NTNTEATFTPD-GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA 195 (235)
Q Consensus 140 ~~~~~----~~i~~~~~~~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (235)
+.... .....++++|. ...|+.++.++.|..-+ ..++.-..+..+...+.++.|.
T Consensus 332 lp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 332 LPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp SCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred CCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 11110 01235788874 34566676666654332 3344434444344467777764
No 377
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=58.85 E-value=51 Score=24.23 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=61.5
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecC--ccee-------eeeeecc-CCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLR--VNAC-------QGILRLR-GRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~--~~~~-------~~~~~~~-~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
.+..+........|+..+..|.+..+... .-.. ...+... ...+ +...+++..++..+..|.++.-.+
T Consensus 147 ~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 147 ELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp CEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 34444444445567777788888777665 2111 1111111 1222 333345668889999999998876
Q ss_pred cCCCCC-----CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcC
Q 026679 84 RSYDKG-----PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 130 (235)
Q Consensus 84 ~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 130 (235)
...... ......+......+..+....+...++..+.+|.+..++..
T Consensus 227 ~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 227 EEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp GGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred HHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 553321 11122222212334444444444567777778887777754
No 378
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=57.32 E-value=52 Score=23.86 Aligned_cols=187 Identities=10% Similarity=0.008 Sum_probs=95.1
Q ss_pred cCCCeeEEEeccceEEEEecCcceeeee---------eeccCCce-EEEcCCCCEEEEEecCCeEEEEeccC---CCCC-
Q 026679 24 PVNDSFMSGSLDHSVRIWDLRVNACQGI---------LRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRS---YDKG- 89 (235)
Q Consensus 24 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~---------~~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~~---~~~~- 89 (235)
|+...+++.+.+|.|+--.+.+.+.... ++...... +........++..+..|.+.-+.... ....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 3456788899999998776654322111 11111111 22333455677777778766665432 2110
Q ss_pred -Cce---eEeecCCCcceeEEEEc---cCCCeEEEecCCCcEEEEEcCCC-----ceeeeeccCCCCCcceeeEEeCCCc
Q 026679 90 -PFD---TFLVGGDTAEVCDIKFS---NDGKSMLLTTTNNNIYVLDAYGG-----EKRCGFSLEPSPNTNTEATFTPDGQ 157 (235)
Q Consensus 90 -~~~---~~~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (235)
... ...+. ....|..+... +++.+++..+.+|.++...+..- .....+.+..+ ..+..+....+..
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 000 11122 23345544332 34567899999999999876421 12222333333 4455555555556
Q ss_pred EEEEeCCCCcEEEEEcCCCce---------eeeecCCCcceeEEEeecCCCEEEEcc--cceEEeeC
Q 026679 158 YVVSGSGDGTLHAWNINTRNE---------VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIP 213 (235)
Q Consensus 158 ~l~~~~~dg~i~v~d~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~i~iw~~ 213 (235)
.++..+.+|.+..++...-.. ...+. ....|.++...+++..++..+ |.++-..+
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 777788888888887643211 11222 234566665544444444443 66666555
No 379
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=56.87 E-value=61 Score=24.49 Aligned_cols=199 Identities=10% Similarity=0.049 Sum_probs=92.9
Q ss_pred hcccccceeEEEeecCCCeeEEEeccceEEEEecCcc-e----------eeeeee-ccCCceEEEcCCCCEEEEEecC-C
Q 026679 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVN-A----------CQGILR-LRGRPTVAFDQQGLVFAVAMEA-G 76 (235)
Q Consensus 10 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~-~----------~~~~~~-~~~~~~~~~~~~~~~l~~~~~d-g 76 (235)
+..-...|..++.- +.+.+.-..||.|+.|-.... + ....+. .....+..++......++-..+ +
T Consensus 11 v~~~~~~v~~ia~G--~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg 88 (406)
T 4d9s_A 11 VTAPPRKVLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGM 88 (406)
T ss_dssp ----CCCEEEEEEC--SSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTT
T ss_pred CCCCccceEEEecC--CCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCC
Confidence 33444566666554 455566677899999964321 1 001111 1122344444444444444455 4
Q ss_pred eEEEEeccCCCC------CCcee-Eeec-CCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee---------eeec
Q 026679 77 AIKLFDSRSYDK------GPFDT-FLVG-GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR---------CGFS 139 (235)
Q Consensus 77 ~v~i~d~~~~~~------~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---------~~~~ 139 (235)
.|+.|-...... ..... .... .....|..++. ...+.++...+|.|+.|-......+ ....
T Consensus 89 ~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~--G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~ 166 (406)
T 4d9s_A 89 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC--GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQK 166 (406)
T ss_dssp EEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEE
T ss_pred EEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEE--ChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceE
Confidence 888885432110 00000 1111 11224555554 3456666778999999975432111 0000
Q ss_pred cCC-CCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCcee-----------eeecC-CCcceeEEEeecCCCEEEEccc
Q 026679 140 LEP-SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV-----------ACWNG-NIGVVACLKWAPRRAMFVAASS 206 (235)
Q Consensus 140 ~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-----------~~~~~-~~~~v~~~~~~~~~~~l~~~~~ 206 (235)
... ....|..++. ...+.++-..+|.++.|-....-.+ ..+.. ....|..++......++++.++
T Consensus 167 v~~~~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~ht~~l~~~G 244 (406)
T 4d9s_A 167 IQAFEGIRIKMVAA--GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSG 244 (406)
T ss_dssp CGGGTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSSEEEEEETTC
T ss_pred ecccCCCcEEEEec--CCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCCcEEEEcCCC
Confidence 000 1123444443 3345555567899999975321110 11111 1234666655544444445557
Q ss_pred ceEEeeCC
Q 026679 207 VLSFWIPN 214 (235)
Q Consensus 207 ~i~iw~~~ 214 (235)
.+..|-.+
T Consensus 245 ~v~~wG~n 252 (406)
T 4d9s_A 245 ALYTYGWS 252 (406)
T ss_dssp CEEEEECC
T ss_pred CEEEeeCC
Confidence 77777653
No 380
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=56.77 E-value=50 Score=27.17 Aligned_cols=60 Identities=8% Similarity=0.139 Sum_probs=36.5
Q ss_pred CEEEEEecCCeEEE-EeccCCCCCC-----ceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEE
Q 026679 67 LVFAVAMEAGAIKL-FDSRSYDKGP-----FDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYV 126 (235)
Q Consensus 67 ~~l~~~~~dg~v~i-~d~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 126 (235)
..++.|+.+|.|.- .......... +..........+|..|.++++.++|++++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 35778888988753 2222211111 111223345678999999999999999988775544
No 381
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=54.93 E-value=49 Score=26.33 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=42.5
Q ss_pred ceeEEEEcc-CC-CeEEEecCCCcEEEEEcC-CC--ceeeeeccCCCCCcc-eeeEEeCCCcEEEEeCCCCcEEE
Q 026679 102 EVCDIKFSN-DG-KSMLLTTTNNNIYVLDAY-GG--EKRCGFSLEPSPNTN-TEATFTPDGQYVVSGSGDGTLHA 170 (235)
Q Consensus 102 ~v~~~~~~~-~~-~~l~~~~~d~~i~~~d~~-~~--~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~v 170 (235)
..+.++... ++ ..++.|+.+|.|.-.-+. .+ .....+.. ....+| ..|.++++..+|++++.++.++|
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 355665544 22 345568888988755543 21 12333344 333567 48999999999999988876665
No 382
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=53.00 E-value=52 Score=27.05 Aligned_cols=60 Identities=13% Similarity=0.037 Sum_probs=35.4
Q ss_pred CEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCC--CeEEEecCCCcEEE
Q 026679 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDG--KSMLLTTTNNNIYV 126 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~ 126 (235)
..++.|..+|.|.-.-...................+|..+.++++. .+|++++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 3678888899875432222111111112222345688899999887 88888877664443
No 383
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=52.22 E-value=51 Score=26.64 Aligned_cols=60 Identities=10% Similarity=0.150 Sum_probs=36.6
Q ss_pred CEEEEEecCCeEEEEeccCCC-CC-Ccee--EeecCCCcceeEEEEccCCCeEEEecCCCcEEE
Q 026679 67 LVFAVAMEAGAIKLFDSRSYD-KG-PFDT--FLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYV 126 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~~~~-~~-~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 126 (235)
..++.|+.+|.|.-.-..... .. .... ........+|..+.++++...|++++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 467788888987644332211 11 1111 112234568899999999888988887765544
No 384
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=51.20 E-value=32 Score=27.41 Aligned_cols=61 Identities=18% Similarity=0.218 Sum_probs=37.3
Q ss_pred CCEEEEEecCCeEEEEeccCCCCC--CceeEeecCCCccee-EEEEccCCCeEEEecCCCcEEE
Q 026679 66 GLVFAVAMEAGAIKLFDSRSYDKG--PFDTFLVGGDTAEVC-DIKFSNDGKSMLLTTTNNNIYV 126 (235)
Q Consensus 66 ~~~l~~~~~dg~v~i~d~~~~~~~--~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~ 126 (235)
-..++.|..+|.|.-..+...... ......+.....+|. .+.++++..+|++++.++.+++
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 356778888998866655432211 111222333346774 8899998888888877654433
No 385
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=50.35 E-value=66 Score=22.92 Aligned_cols=164 Identities=14% Similarity=0.117 Sum_probs=93.0
Q ss_pred hhhcccc---cceeEEEeecCCCeeEEEeccceEEE---EecCcceeeeeeeccCCceEEEc-C--CCCEEEEEecCCeE
Q 026679 8 RYFKGHK---ERVISLCMSPVNDSFMSGSLDHSVRI---WDLRVNACQGILRLRGRPTVAFD-Q--QGLVFAVAMEAGAI 78 (235)
Q Consensus 8 ~~~~~h~---~~v~~~~~~~~~~~l~s~~~d~~i~v---wd~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~dg~v 78 (235)
+..++|. +.+..+........|+.-+.+|.++- |++........+. .+..++..- + +...++..+.+|.+
T Consensus 14 r~~~g~~~~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~i 92 (276)
T 3no0_A 14 IPVEELPLEKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYV 92 (276)
T ss_dssp EEGGGCCSSCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEE
T ss_pred eeccCCCCCCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEE
Confidence 3445553 34555554444556666667777654 3332222111122 223332221 3 46789999999999
Q ss_pred EEEeccCCC--CCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCC-------CceeeeeccCCCCCccee
Q 026679 79 KLFDSRSYD--KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG-------GEKRCGFSLEPSPNTNTE 149 (235)
Q Consensus 79 ~i~d~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~~~~i~~ 149 (235)
+-..+.... ........+.. ...+..+........++..+..|.+..+.... ..-...+.+... ..+..
T Consensus 93 Kr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~-d~vv~ 170 (276)
T 3no0_A 93 KKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN-DETSG 170 (276)
T ss_dssp EEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT-CCEEE
T ss_pred EEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC-CEEEE
Confidence 999876653 11111222333 23455555555556788889999988887532 122222333333 44666
Q ss_pred eEEeCCCcEEEEeCCCCcEEEEEcC
Q 026679 150 ATFTPDGQYVVSGSGDGTLHAWNIN 174 (235)
Q Consensus 150 ~~~~~~~~~l~~~~~dg~i~v~d~~ 174 (235)
+...+++..++..+..|.++...+.
T Consensus 171 ~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 171 LRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp EEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 6555666788888999999888764
No 386
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=50.18 E-value=87 Score=24.96 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=37.8
Q ss_pred CEEEEEecCCeEEEEecc-CCCCCCceeEeecCCCcce-eEEEEccCCCeEEEecCCCcEEE
Q 026679 67 LVFAVAMEAGAIKLFDSR-SYDKGPFDTFLVGGDTAEV-CDIKFSNDGKSMLLTTTNNNIYV 126 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~-~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~~ 126 (235)
..++.|+.+|.|.-.-+. ...........+ ....+| ..+.++++...|++++..+.+++
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 467778889988755443 222222233333 445677 48899998888998887775554
No 387
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=50.01 E-value=70 Score=26.45 Aligned_cols=58 Identities=12% Similarity=0.080 Sum_probs=36.9
Q ss_pred CeEEEecCCCcEEEEEcCCC----ceeeeeccCCCCCcc-eeeEEeCCCcEEEEeCCCCcEEE
Q 026679 113 KSMLLTTTNNNIYVLDAYGG----EKRCGFSLEPSPNTN-TEATFTPDGQYVVSGSGDGTLHA 170 (235)
Q Consensus 113 ~~l~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~v 170 (235)
..++.|+.+|.|.-.-+... .....+.......+| ..+.++++..+|+.++.++.+++
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 34667888998876554431 122233233233556 68999999889998887766555
No 388
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=45.73 E-value=76 Score=22.31 Aligned_cols=146 Identities=8% Similarity=-0.015 Sum_probs=75.4
Q ss_pred eeEEEeccceEEEEecCcceee-eeeeccCCce-EEEcCCCCEEEEEecCCeEEEEeccCC---CCCCc---eeEeecCC
Q 026679 28 SFMSGSLDHSVRIWDLRVNACQ-GILRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSY---DKGPF---DTFLVGGD 99 (235)
Q Consensus 28 ~l~s~~~d~~i~vwd~~~~~~~-~~~~~~~~~~-~~~~~~~~~l~~~~~dg~v~i~d~~~~---~~~~~---~~~~~~~~ 99 (235)
..++.+.+|.|+--........ ..++...... +........++..+..|.++-+..... ..... ....+. .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~-~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP-P 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-T
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-C
Confidence 4566677777765543321110 0111111111 222223445666677787766654332 11110 011122 2
Q ss_pred CcceeEEEEccCCCeEEEecCCCcEEEEEcCCC-----ceeeeeccCCCCCcceeeEEe-CCCcEEEEeCCCCcEEEEEc
Q 026679 100 TAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG-----EKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNI 173 (235)
Q Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-----~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~v~d~ 173 (235)
...|..+....++.+++.++..|.++...+..- .-...+.+... ..+..+... .++..++..+.+|.+..+..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 345666644345667889999999999887421 11222333332 345445454 34567888888999888887
Q ss_pred CC
Q 026679 174 NT 175 (235)
Q Consensus 174 ~~ 175 (235)
..
T Consensus 162 ~e 163 (256)
T 1zvt_A 162 SD 163 (256)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 389
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=45.04 E-value=1.2e+02 Score=25.07 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=36.3
Q ss_pred eEEEecCCCcEEEE-EcCCCc-eeeeeccCCCCCcceeeEEeCCC--cEEEEeCCCCcEEE
Q 026679 114 SMLLTTTNNNIYVL-DAYGGE-KRCGFSLEPSPNTNTEATFTPDG--QYVVSGSGDGTLHA 170 (235)
Q Consensus 114 ~l~~~~~d~~i~~~-d~~~~~-~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg~i~v 170 (235)
.++.|+.+|.|.-. ...... .+.....-....+|..|.++++. .+|++++.++.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 57778888887544 333322 22222222334678899999988 89998888776655
No 390
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=40.24 E-value=94 Score=21.83 Aligned_cols=142 Identities=13% Similarity=0.126 Sum_probs=72.6
Q ss_pred CEEEEEecCCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCC-------Ccee-eee
Q 026679 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG-------GEKR-CGF 138 (235)
Q Consensus 67 ~~l~~~~~dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-------~~~~-~~~ 138 (235)
...++.+.+|.|+--....... ....+.... .+..+........++..+..|.++-+.... |..+ ..+
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~---~~~~lke~D-~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i 78 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDA---PGLNYKAGD-SFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKL 78 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCS---TTSCCCTTC-CEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTC
T ss_pred CEEEEEeCCCEEEEeeCCcCCc---eeccCCCCC-EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeee
Confidence 3456677888887665443221 111222333 343343334455677778888877665421 2211 112
Q ss_pred ccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCC-------CceeeeecCCCcceeEEEee--cCCCEEEEcc-cce
Q 026679 139 SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-------RNEVACWNGNIGVVACLKWA--PRRAMFVAAS-SVL 208 (235)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~-~~i 208 (235)
.+... ..|..+....++.+|+.++..|.++...+.. +.....+... ..+-.+... ++...++.+. |.+
T Consensus 79 ~L~~~-e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~ 156 (256)
T 1zvt_A 79 TLPPG-ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRM 156 (256)
T ss_dssp CCCTT-CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEE
T ss_pred cCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeE
Confidence 23322 3465554334567788899999999888743 2223333322 334443333 3333443333 666
Q ss_pred EEeeCC
Q 026679 209 SFWIPN 214 (235)
Q Consensus 209 ~iw~~~ 214 (235)
..+..+
T Consensus 157 lrf~~~ 162 (256)
T 1zvt_A 157 LMFPVS 162 (256)
T ss_dssp EEEEGG
T ss_pred EEEEHH
Confidence 556553
No 391
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=39.61 E-value=73 Score=20.35 Aligned_cols=51 Identities=8% Similarity=0.040 Sum_probs=34.7
Q ss_pred CCeeEEEeccceEEEEecCcceeeeeeeccCCceEEEcCCC-C--EEEEEecCC
Q 026679 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQG-L--VFAVAMEAG 76 (235)
Q Consensus 26 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~--~l~~~~~dg 76 (235)
|+-++--=.+++|++.|..+...+..++...+..+....++ . .|+....|+
T Consensus 54 gq~~~L~v~~~tlrLvD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd~ 107 (148)
T 3d8d_A 54 GKDLLLQLEDETLKLVEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARDK 107 (148)
T ss_dssp TCEEEEEEETTEEEEECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEECT
T ss_pred CceEEEEEcCCeEEEecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEecC
Confidence 44444344578999999999999999988888776666544 2 355544443
No 392
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=38.62 E-value=1.3e+02 Score=22.81 Aligned_cols=193 Identities=9% Similarity=-0.022 Sum_probs=94.0
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEec--Cc-cee---------eeeeeccCCceEEEcCCCCEEEEEecCCeEEEEec
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDL--RV-NAC---------QGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~--~~-~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
.|..++.. ..+.+....||.|+.|-. .. ++. ..........+..+.......++-..+|.|+.|-.
T Consensus 128 ~i~~va~G--~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~ 205 (423)
T 3mvd_K 128 KALCISAG--DSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGC 205 (423)
T ss_dssp CEEEEEEC--SSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CEEEEEcC--cCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCCeEEEEecCCeEEEeeC
Confidence 45554443 345556678899999975 21 211 11111122334455555556666778899999964
Q ss_pred cCCCCCC-------------------ceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee---------
Q 026679 84 RSYDKGP-------------------FDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR--------- 135 (235)
Q Consensus 84 ~~~~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~--------- 135 (235)
....... ............|..++... ...++.-..++.|+.|-......+
T Consensus 206 n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~-~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~ 284 (423)
T 3mvd_K 206 AEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATN-YCTFMRESQTQVIWATGLNNFKQLAHETKGKEF 284 (423)
T ss_dssp CTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEET-TEEEEEETTTCCEEEEEECTTCTTSSCCTTCSE
T ss_pred CcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECC-cEEEEEECCCCeEEEEeCCCCCcCCCCCCCCce
Confidence 3211100 00111111223455554432 222333367889999875432111
Q ss_pred --eeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCCCc------------eeeeecCCCcceeEEEeecCCCEE
Q 026679 136 --CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN------------EVACWNGNIGVVACLKWAPRRAMF 201 (235)
Q Consensus 136 --~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~l 201 (235)
...... ...|..++. ...+.+.-..+|.|+.|-....- ....+......|..|+.......+
T Consensus 285 ~~~p~~~~--~~~v~~ia~--G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~a 360 (423)
T 3mvd_K 285 ALTPIKTE--LKDIRHIAG--GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYA 360 (423)
T ss_dssp EEEEEEEC--CCSEEEEEE--CSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEE
T ss_pred eeeeEEcC--CCCeEEEEc--ccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEE
Confidence 111111 123444443 33444555678889998753210 111122222357777766555555
Q ss_pred EEcccceEEeeCCC
Q 026679 202 VAASSVLSFWIPNP 215 (235)
Q Consensus 202 ~~~~~~i~iw~~~~ 215 (235)
++..+.+..|=.+.
T Consensus 361 lt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 361 VTIDGKLYSWGSGV 374 (423)
T ss_dssp EETTSCEEEEECCT
T ss_pred EcCCCCEEEECCCC
Confidence 55558888886543
No 393
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=38.36 E-value=1.1e+02 Score=22.12 Aligned_cols=160 Identities=13% Similarity=0.064 Sum_probs=84.5
Q ss_pred cceeEEEee---cCCCeeEEEeccceEEEEecCcceee-----eeeecc-CCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 15 ERVISLCMS---PVNDSFMSGSLDHSVRIWDLRVNACQ-----GILRLR-GRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 15 ~~v~~~~~~---~~~~~l~s~~~d~~i~vwd~~~~~~~-----~~~~~~-~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
+.|.++..- .++.+++..+..|.++-..+...... ..+... .... +........++..+.+|.+..++.
T Consensus 95 e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~l~T~~G~~irf~~ 174 (307)
T 1zi0_A 95 ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKE 174 (307)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEG
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEEEECCCCcEEEEEH
Confidence 456555432 24567888999999998876532211 111111 1222 223334556788888898888876
Q ss_pred cCCCCC-----CceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCC-------CceeeeeccCCCCCcceeeE
Q 026679 84 RSYDKG-----PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG-------GEKRCGFSLEPSPNTNTEAT 151 (235)
Q Consensus 84 ~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-------~~~~~~~~~~~~~~~i~~~~ 151 (235)
..-... ......+. ....|..+...+++..+++.+..|.++..++.. ++-...+.+....+.+..+.
T Consensus 175 ~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~~~ 253 (307)
T 1zi0_A 175 SSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAV 253 (307)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEEEE
T ss_pred HHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEEEE
Confidence 542211 11112222 234566665555556788888999888887632 11122223332223444443
Q ss_pred EeCCCcEEEEeCCCCcEEEEEcCC
Q 026679 152 FTPDGQYVVSGSGDGTLHAWNINT 175 (235)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~v~d~~~ 175 (235)
...+...++..+.+|.+.-++...
T Consensus 254 ~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 254 QVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EECTTCEEEEEESSCCEEEEEGGG
T ss_pred EeCCCceEEEEcCCCcEEEEeccc
Confidence 333344455555666665556543
No 394
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=36.75 E-value=1.2e+02 Score=22.02 Aligned_cols=114 Identities=8% Similarity=0.036 Sum_probs=66.2
Q ss_pred ceeEEEeec---CCCeeEEEeccceEEEEecCccee-----eeeeecc-CCce--EEEcCCCCEEEEEecCCeEEEEecc
Q 026679 16 RVISLCMSP---VNDSFMSGSLDHSVRIWDLRVNAC-----QGILRLR-GRPT--VAFDQQGLVFAVAMEAGAIKLFDSR 84 (235)
Q Consensus 16 ~v~~~~~~~---~~~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~-~~~~--~~~~~~~~~l~~~~~dg~v~i~d~~ 84 (235)
.|.++...+ +...|+..+..|.++...+..... ...+... .... +.....+..++..+.+|....+...
T Consensus 101 ~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ 180 (312)
T 1suu_A 101 EILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSR 180 (312)
T ss_dssp CEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHH
Confidence 444443332 356788888999999887754321 1112211 2222 2333345678888999999999876
Q ss_pred CCCC-----CCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcC
Q 026679 85 SYDK-----GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 130 (235)
Q Consensus 85 ~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 130 (235)
.-.. .......+.. ...|..+...+++..+++.+..|.....++.
T Consensus 181 ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 181 DVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp GSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred HccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 5211 1112222322 3455555555556678888999998888874
No 395
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=35.89 E-value=1.7e+02 Score=23.63 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=31.2
Q ss_pred CCCCcceeeEEeCC--CcEEEEeCCCC----cEEEEEcCCCceeeeecCC--CcceeEEEeecC
Q 026679 142 PSPNTNTEATFTPD--GQYVVSGSGDG----TLHAWNINTRNEVACWNGN--IGVVACLKWAPR 197 (235)
Q Consensus 142 ~~~~~i~~~~~~~~--~~~l~~~~~dg----~i~v~d~~~~~~~~~~~~~--~~~v~~~~~~~~ 197 (235)
.|...+....|.|+ |..++.+.+++ -..+.|.++++.+...... .+......|.|+
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~ 424 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPR 424 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTT
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCC
Confidence 45455555667776 44566665541 2456788888887665432 333333444454
No 396
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=35.75 E-value=1.4e+02 Score=22.56 Aligned_cols=148 Identities=5% Similarity=0.014 Sum_probs=75.3
Q ss_pred cceeEEEee---cC----CCeeEEE-eccceEEEEecCcceeeeeee----cc----------------CCceEEEcCC-
Q 026679 15 ERVISLCMS---PV----NDSFMSG-SLDHSVRIWDLRVNACQGILR----LR----------------GRPTVAFDQQ- 65 (235)
Q Consensus 15 ~~v~~~~~~---~~----~~~l~s~-~~d~~i~vwd~~~~~~~~~~~----~~----------------~~~~~~~~~~- 65 (235)
..+..+.+. |+ +.+++.. +....|.|+|+.+++.-+... .. +...++++|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 457778777 22 2333333 346779999998876554442 10 1112778887
Q ss_pred ---CCEEEEEecCC-eEEEEe---ccCCCCC-CceeEeecCCCcceeEEEEc-cCCCeEEEecCCCcEEEEEcCC-C---
Q 026679 66 ---GLVFAVAMEAG-AIKLFD---SRSYDKG-PFDTFLVGGDTAEVCDIKFS-NDGKSMLLTTTNNNIYVLDAYG-G--- 132 (235)
Q Consensus 66 ---~~~l~~~~~dg-~v~i~d---~~~~~~~-~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~-~--- 132 (235)
++.|....-.+ .+.--. ++..... .....-..+....-..+++. .+|..+++--....|..|+..+ .
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~ 311 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRM 311 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCG
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCcccc
Confidence 66666665443 333332 1222111 11111111111334456675 5787777777888999999865 1
Q ss_pred ceeeeeccCCCCCcceeeEEeCCCcEEEEe
Q 026679 133 EKRCGFSLEPSPNTNTEATFTPDGQYVVSG 162 (235)
Q Consensus 133 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (235)
+....+.....-..+..+.+.++|.+.+..
T Consensus 312 ~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 312 KNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp GGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred CceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 111222222233445566665555544433
No 397
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=31.98 E-value=2.2e+02 Score=23.67 Aligned_cols=94 Identities=4% Similarity=0.000 Sum_probs=53.4
Q ss_pred CCCcEEEEEcCCCc-------eeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCc--EEEEEcCCCc-eeee-ecCC-Cc
Q 026679 120 TNNNIYVLDAYGGE-------KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT--LHAWNINTRN-EVAC-WNGN-IG 187 (235)
Q Consensus 120 ~d~~i~~~d~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~--i~v~d~~~~~-~~~~-~~~~-~~ 187 (235)
..+.|...|+.++. ....+-.+.....+..+.+..+ .++++...++. |.++|+.+++ .... +... .+
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~ 396 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQN 396 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTT
T ss_pred CCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCe
Confidence 36779999987642 1122222333455777888765 56666666654 7778876664 2233 2211 24
Q ss_pred ceeEEEeecCCCEEE-Ecc-----cceEEeeCC
Q 026679 188 VVACLKWAPRRAMFV-AAS-----SVLSFWIPN 214 (235)
Q Consensus 188 ~v~~~~~~~~~~~l~-~~~-----~~i~iw~~~ 214 (235)
.+......+++..++ +.+ ..+..+++.
T Consensus 397 ~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 397 AIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp CEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 566666777765443 332 557777765
No 398
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=30.32 E-value=60 Score=20.23 Aligned_cols=26 Identities=4% Similarity=-0.068 Sum_probs=15.5
Q ss_pred CCcceeEEEeecCCCEEEEcc-cceEE
Q 026679 185 NIGVVACLKWAPRRAMFVAAS-SVLSF 210 (235)
Q Consensus 185 ~~~~v~~~~~~~~~~~l~~~~-~~i~i 210 (235)
..+.|.++.+...+.+|-.++ +.+.+
T Consensus 105 ~~~~V~~V~~~~g~~~L~l~~~~~v~~ 131 (138)
T 3c12_A 105 VDAPVDSVTIGSDGLYLNLTGLGTSPL 131 (138)
T ss_dssp EEEEEEEEEEETTEEEEEETTTEEEET
T ss_pred EEEEEEEEEecCCeEEEEECCCcEEeH
Confidence 346788888876555555544 44433
No 399
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=29.42 E-value=2.5e+02 Score=23.57 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=20.9
Q ss_pred ccceeEEEeecCC-CeeEEEeccceEEEEe
Q 026679 14 KERVISLCMSPVN-DSFMSGSLDHSVRIWD 42 (235)
Q Consensus 14 ~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd 42 (235)
.+.|.+|+++|.. ..++.+...+.|...+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~ 43 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD 43 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec
Confidence 4689999999964 5666777667665554
No 400
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=28.33 E-value=2.4e+02 Score=22.81 Aligned_cols=69 Identities=9% Similarity=-0.016 Sum_probs=41.8
Q ss_pred ceeEEEEcc----CC--CeEEEecCCCcEEEEEcCCC--------ceeeeeccCC---------CCCcceeeEEeCCCcE
Q 026679 102 EVCDIKFSN----DG--KSMLLTTTNNNIYVLDAYGG--------EKRCGFSLEP---------SPNTNTEATFTPDGQY 158 (235)
Q Consensus 102 ~v~~~~~~~----~~--~~l~~~~~d~~i~~~d~~~~--------~~~~~~~~~~---------~~~~i~~~~~~~~~~~ 158 (235)
..+.++... ++ ..++.|+.+|.|.-.-+..+ ..+..+..-. ...+|..|.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 356777664 22 34677888998754332221 1111121111 1356889999999999
Q ss_pred EEEeCCCCcEEE
Q 026679 159 VVSGSGDGTLHA 170 (235)
Q Consensus 159 l~~~~~dg~i~v 170 (235)
|++++.++.++|
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999998887665
No 401
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=28.00 E-value=86 Score=20.90 Aligned_cols=36 Identities=11% Similarity=0.285 Sum_probs=22.6
Q ss_pred cccceeEEEeecCC-CeeEEEeccceEEEEecCccee
Q 026679 13 HKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNAC 48 (235)
Q Consensus 13 h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~~~~ 48 (235)
+.+.+.++.|...+ .-+++...++++.++|.+-|+.
T Consensus 117 g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 117 GRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp TCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred CCceEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 35556666676543 3366666677888888766553
No 402
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=27.95 E-value=1.9e+02 Score=21.72 Aligned_cols=193 Identities=12% Similarity=0.097 Sum_probs=91.5
Q ss_pred ceeEEEeecCCCeeEEEeccceEEEEecCccee-----------eeeee-ccCCceEEEcCCCCEEEEEecCCeEEEEec
Q 026679 16 RVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC-----------QGILR-LRGRPTVAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 16 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
.|..++.. ..+.+....||.|+.|-....-. ...+. .....+..+.......++-..+|.+..|-.
T Consensus 122 ~i~~ia~G--~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 122 RIKQIACG--DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp CEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CEEEEEEC--hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCCCeEEEEeCCCCEEEeeC
Confidence 45555443 34555667889999996542110 01111 112234455555566666778899999965
Q ss_pred cCCCCC------Ccee-Eeec-CCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCcee---------eeeccC-CCCC
Q 026679 84 RSYDKG------PFDT-FLVG-GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR---------CGFSLE-PSPN 145 (235)
Q Consensus 84 ~~~~~~------~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---------~~~~~~-~~~~ 145 (235)
...... .... .... .....+..++.. ..+.++...+|.|+.|-......+ ...... ....
T Consensus 200 n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~ 277 (406)
T 4d9s_A 200 GRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS 277 (406)
T ss_dssp CTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTS
T ss_pred CCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCC
Confidence 432110 0000 1111 111344444433 345566678899999975432111 000000 0112
Q ss_pred cceeeEEeCCCcEEEEeCCCCcEEEEEcCCCcee-----------eeec-CCCcceeEEEeecCCCEEEEcccceEEeeC
Q 026679 146 TNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV-----------ACWN-GNIGVVACLKWAPRRAMFVAASSVLSFWIP 213 (235)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-----------~~~~-~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~ 213 (235)
.|..++- ...+.++-..||.++.|-....-.+ ..+. .....|..++.-....+.++..+.+..|=.
T Consensus 278 ~v~~i~~--G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~ 355 (406)
T 4d9s_A 278 FISQISG--GWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGR 355 (406)
T ss_dssp CEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEEEC
T ss_pred CEEEEEe--cCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecC
Confidence 2443333 3334445567888988865431110 0111 112345566554443444444477888865
Q ss_pred C
Q 026679 214 N 214 (235)
Q Consensus 214 ~ 214 (235)
+
T Consensus 356 n 356 (406)
T 4d9s_A 356 G 356 (406)
T ss_dssp C
T ss_pred C
Confidence 3
No 403
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=25.27 E-value=2.4e+02 Score=22.74 Aligned_cols=27 Identities=11% Similarity=0.207 Sum_probs=22.0
Q ss_pred CcceeEEEEccCCCeEEEecCCCcEEE
Q 026679 100 TAEVCDIKFSNDGKSMLLTTTNNNIYV 126 (235)
Q Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d~~i~~ 126 (235)
..+|..+.++++...|++++.++.+++
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEe
Confidence 457889999999899999888876655
No 404
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=24.64 E-value=1.8e+02 Score=24.07 Aligned_cols=61 Identities=18% Similarity=0.179 Sum_probs=36.9
Q ss_pred CCEEEEEecCCeEEEEeccCCCCCCc--eeEeecCCCcce-eEEEEccCCCeEEEecCCCcEEE
Q 026679 66 GLVFAVAMEAGAIKLFDSRSYDKGPF--DTFLVGGDTAEV-CDIKFSNDGKSMLLTTTNNNIYV 126 (235)
Q Consensus 66 ~~~l~~~~~dg~v~i~d~~~~~~~~~--~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~~ 126 (235)
-..++.|..+|.|.-.-+........ ..........+| ..+.++++..+|++++..+.+++
T Consensus 412 ~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 412 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 35678888999887654433211111 112223244566 68999998888888877665444
No 405
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=23.54 E-value=1.2e+02 Score=17.73 Aligned_cols=46 Identities=20% Similarity=0.287 Sum_probs=26.5
Q ss_pred eeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEc
Q 026679 149 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAA 204 (235)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 204 (235)
.+.+..||++++.... +. .+|...+.. ......+...++|.+++.+
T Consensus 54 ~L~l~~dGnLvL~d~~-~~-~vWss~t~~--------~~~~~~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSS-GR-SLWASHSTR--------GSGNYILILQDDGNVIIYG 99 (105)
T ss_dssp EEEECTTSCEEEECTT-CC-EEEECCCCC--------CSSCEEEEECTTSCEEEEE
T ss_pred EEEEeCCccEEEECCC-cE-EEEEecCCC--------CCCCEEEEEeCCCeEEEEC
Confidence 4778888887776443 33 367654321 1112345667788777764
No 406
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.65 E-value=1.3e+02 Score=17.79 Aligned_cols=56 Identities=9% Similarity=0.199 Sum_probs=29.6
Q ss_pred eeEEeCCCcEEEEeCCCCcEEEEEcCCCceeeeecCCCcceeEEEeecCCCEEEEcccceEEeeCC
Q 026679 149 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPN 214 (235)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~i~iw~~~ 214 (235)
.+.+..+|++++.... +...+|...+. .........+.+.+||.+++-. --+|...
T Consensus 53 ~l~l~~dGNLVl~~~~-~~~~vW~S~t~------~~~~~~~~~l~Lq~dGNlvly~---~~~W~s~ 108 (111)
T 3mez_A 53 TLRLNNRGQLEIHSAN-SNTPVWVYPRS------VNTVRGNYAATLGPDQHVTIYG---PAIWSTP 108 (111)
T ss_dssp EEEECTTSCEEEECSS-CSSCSEEESSS------CCCCSSCCEEEECTTSCEEEEC---SEEEECC
T ss_pred EEEEcCCCcEEEEeCC-CCEEEEEeccc------cCCCCcCEEEEECCCCeEEEec---cCEEccC
Confidence 4677778887766432 33346643321 0011123456677787777765 3456544
No 407
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=22.63 E-value=2.5e+02 Score=21.13 Aligned_cols=184 Identities=9% Similarity=0.042 Sum_probs=0.0
Q ss_pred EEeecCCCeeEEEeccceEEEEecCc----------------------ceeeeeeeccCCceEEEcCCCCEEEEE---ec
Q 026679 20 LCMSPVNDSFMSGSLDHSVRIWDLRV----------------------NACQGILRLRGRPTVAFDQQGLVFAVA---ME 74 (235)
Q Consensus 20 ~~~~~~~~~l~s~~~d~~i~vwd~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~ 74 (235)
+.++....+.+.-..||.|+.|-... ...+..+.......+++..+|+.++.| ..
T Consensus 62 ~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~l~~~i~~va~G~~hs~alt~~G~v~~wG~~~n~ 141 (413)
T 1a12_A 62 VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDN 141 (413)
T ss_dssp EEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEET
T ss_pred EEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEecCCCcEEEEecCCCeEEEEcCCCcEEEeeCCcCC
Q ss_pred CCeEEEEeccCCCCCCceeEeecCCCcceeEEEEccCCCeEEEecCCCcEEEEEcCCCceeeeeccCC------------
Q 026679 75 AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP------------ 142 (235)
Q Consensus 75 dg~v~i~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------------ 142 (235)
.|.+-+-+...... ..........|..++.- ..+.++...+|.|+.|=......+-.-....
T Consensus 142 ~GqlG~~~~~~~~~----~P~~v~~~~~i~~ia~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~ 215 (413)
T 1a12_A 142 NGVIGLLEPMKKSM----VPVQVQLDVPVVKVASG--NDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERL 215 (413)
T ss_dssp TEEEESSBBTBCEE----EEEEECCSSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHH
T ss_pred CCccCcCCcccccc----CCEEecCCCCEEEEEec--CceEEEEcCCCCEEEeeCCCCCccCCCcccccccccccccccc
Q ss_pred --------------CCCcceeeEEeCCCcEEEEeCCCCcEEEEEcCC--------------CceeeeecCCCcceeEEEe
Q 026679 143 --------------SPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT--------------RNEVACWNGNIGVVACLKW 194 (235)
Q Consensus 143 --------------~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~~~--------------~~~~~~~~~~~~~v~~~~~ 194 (235)
....|..++...+..++++ .+|.|+.|-... ...+..+......|..++.
T Consensus 216 ~~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt--~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~ 293 (413)
T 1a12_A 216 LVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAIS--HEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSG 293 (413)
T ss_dssp HSCEECCCBCSSCCSBCCEEEEEEETTEEEEEE--TTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEE
T ss_pred ccCceEeeccccccCCccEEEEEeCCCEEEEEe--CCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEec
Q ss_pred ecCCCEEEEcccceEEe
Q 026679 195 APRRAMFVAASSVLSFW 211 (235)
Q Consensus 195 ~~~~~~l~~~~~~i~iw 211 (235)
..+...+++..+.+..|
T Consensus 294 G~~hs~al~~~G~v~~w 310 (413)
T 1a12_A 294 GQHHTVCMDSEGKAYSL 310 (413)
T ss_dssp CSSEEEEEETTSCEEEE
T ss_pred ccceEEEEeCCCCEEEe
No 408
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=22.03 E-value=2.5e+02 Score=21.03 Aligned_cols=158 Identities=17% Similarity=0.067 Sum_probs=80.9
Q ss_pred cceeEEEeec---CCCeeEEEeccceEEEEecCccee-----eeeeecc-CCce--EEEcCCCCEEEEEecCCeEEEEec
Q 026679 15 ERVISLCMSP---VNDSFMSGSLDHSVRIWDLRVNAC-----QGILRLR-GRPT--VAFDQQGLVFAVAMEAGAIKLFDS 83 (235)
Q Consensus 15 ~~v~~~~~~~---~~~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~-~~~~--~~~~~~~~~l~~~~~dg~v~i~d~ 83 (235)
..|.++..-. ++.+|+.++..|.++...+..... +..++.. .... +........++..+..|.+..++.
T Consensus 99 e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~~i~l~T~~G~~irf~~ 178 (370)
T 3l6v_A 99 ERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDRDVLLFASNGKTVRFGE 178 (370)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCCEEEEEETTSEEEEEEG
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCceEEEEeCCCeEEEEEc
Confidence 4555554332 346899999999999888654322 1111111 1222 333344557888888898888876
Q ss_pred cCCCC-----CCceeEeecCCCcceeEEEEcc-----------------------------------CCCeEEEecCCCc
Q 026679 84 RSYDK-----GPFDTFLVGGDTAEVCDIKFSN-----------------------------------DGKSMLLTTTNNN 123 (235)
Q Consensus 84 ~~~~~-----~~~~~~~~~~~~~~v~~~~~~~-----------------------------------~~~~l~~~~~d~~ 123 (235)
..-.. .......+. ....|.++...+ ++..+++.+..|.
T Consensus 179 ~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~ 257 (370)
T 3l6v_A 179 STVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGY 257 (370)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC-----------------------------------CEEEEEETTSE
T ss_pred cccCccCCCCCCeeeEEeC-CCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCCCC
Confidence 54221 111111222 223444444433 3457888889998
Q ss_pred EEEEEcCC-------CceeeeeccCCCCCcceeeEEeCCCcEEEEeCCCCcEEEEEc
Q 026679 124 IYVLDAYG-------GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173 (235)
Q Consensus 124 i~~~d~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~v~d~ 173 (235)
.+...+.. ++-+..+......+.+..+.+..+...++..+..|.+.-...
T Consensus 258 gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v 314 (370)
T 3l6v_A 258 GKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRG 314 (370)
T ss_dssp EEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEG
T ss_pred EEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeH
Confidence 88887642 222233333333334444433333344444555565555554
No 409
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=20.81 E-value=2.1e+02 Score=19.50 Aligned_cols=56 Identities=9% Similarity=-0.013 Sum_probs=33.0
Q ss_pred CCcEEEEEcCCCceeeeeccCCCCCcceeeEEeCCCcEEEE-eCCCCcEEEEEcCCCceeeee
Q 026679 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVS-GSGDGTLHAWNINTRNEVACW 182 (235)
Q Consensus 121 d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~v~d~~~~~~~~~~ 182 (235)
+..+.+|.+..+..+--+..-. +..|.....+-+. ...+|.+++-+.+++.++..+
T Consensus 68 g~~lt~Wa~~~~nw~wgY~~~d------s~~FG~~r~W~i~~~~p~G~VqFvN~~TgtCL~ay 124 (206)
T 1sr4_A 68 GALLTVWALAKRNWLWAYPNIY------SQDFGNIRNWKMEPGKHREYFRFVNQSLGTCVEAY 124 (206)
T ss_dssp SEEEEECSCSTTCBEEEEEGGG------CGGGGGGGCEEEEECSSTTCEEEEETTTCCEEEEE
T ss_pred CCEEEEEecCCCcceeeecccc------cCCcCCcceeEEEeecCCCEEEEEECCCCceeeec
Confidence 3456788887766555444321 2334433344444 566777777777777776664
Done!