Your job contains 1 sequence.
>026681
MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA
IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN
MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI
NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLRKLER
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026681
(235 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061345 - symbol:ATNTH1 species:3702 "Arabidop... 803 6.0e-80 1
TAIR|locus:2198738 - symbol:NTH2 "endonuclease III 2" spe... 778 2.7e-77 1
UNIPROTKB|E2QX23 - symbol:NTHL1 "Uncharacterized protein"... 521 4.6e-50 1
UNIPROTKB|Q2KID2 - symbol:NTHL1 "Endonuclease III-like pr... 516 1.5e-49 1
UNIPROTKB|P78549 - symbol:NTHL1 "Endonuclease III-like pr... 515 2.0e-49 1
UNIPROTKB|F1RFB3 - symbol:NTHL1 "Uncharacterized protein"... 505 2.3e-48 1
MGI|MGI:1313275 - symbol:Nthl1 "nth (endonuclease III)-li... 505 2.3e-48 1
RGD|1309289 - symbol:Nthl1 "nth (endonuclease III)-like 1... 497 1.6e-47 1
UNIPROTKB|F1NQP6 - symbol:NTHL1 "Uncharacterized protein"... 493 4.2e-47 1
DICTYBASE|DDB_G0277247 - symbol:apnB "putative endonuclea... 492 5.4e-47 1
ZFIN|ZDB-GENE-120511-4 - symbol:nthl1 "nth endonuclease I... 475 3.4e-45 1
WB|WBGene00011201 - symbol:nth-1 species:6239 "Caenorhabd... 456 3.5e-43 1
FB|FBgn0032907 - symbol:CG9272 species:7227 "Drosophila m... 447 3.2e-42 1
POMBASE|SPAC30D11.07 - symbol:nth1 "DNA endonuclease III"... 419 2.9e-39 1
UNIPROTKB|H3BPD5 - symbol:NTHL1 "Endonuclease III-like pr... 357 1.5e-35 2
TIGR_CMR|GSU_1450 - symbol:GSU_1450 "endonuclease III, pu... 381 3.1e-35 1
CGD|CAL0001822 - symbol:NTG1 species:5476 "Candida albica... 362 3.2e-33 1
UNIPROTKB|Q5A763 - symbol:NTG1 "Putative uncharacterized ... 362 3.2e-33 1
SGD|S000005403 - symbol:NTG2 "DNA N-glycosylase and apuri... 358 8.5e-33 1
SGD|S000000013 - symbol:NTG1 "DNA N-glycosylase and apuri... 330 7.9e-30 1
UNIPROTKB|H3BRL9 - symbol:NTHL1 "Endonuclease III-like pr... 281 1.2e-24 1
ASPGD|ASPL0000064583 - symbol:AN10978 species:162425 "Eme... 263 2.2e-22 1
UNIPROTKB|P63540 - symbol:nth "Endonuclease III" species:... 252 1.5e-21 1
TIGR_CMR|DET_0935 - symbol:DET_0935 "endonuclease III" sp... 249 3.0e-21 1
TIGR_CMR|CHY_1121 - symbol:CHY_1121 "endonuclease III" sp... 242 1.7e-20 1
UNIPROTKB|Q97QE0 - symbol:nth "Endonuclease III" species:... 231 2.5e-19 1
TIGR_CMR|BA_1570 - symbol:BA_1570 "endonuclease III" spec... 217 7.5e-18 1
UNIPROTKB|P0AB83 - symbol:nth "endonuclease III; specific... 212 2.5e-17 1
TIGR_CMR|ECH_0857 - symbol:ECH_0857 "endonuclease III" sp... 209 5.3e-17 1
TIGR_CMR|SO_2514 - symbol:SO_2514 "endonuclease III" spec... 207 8.6e-17 1
TIGR_CMR|APH_0897 - symbol:APH_0897 "endonuclease III" sp... 206 1.1e-16 1
TIGR_CMR|CBU_1697 - symbol:CBU_1697 "endonuclease III" sp... 205 1.4e-16 1
TIGR_CMR|CJE_0698 - symbol:CJE_0698 "endonuclease III" sp... 201 3.7e-16 1
UNIPROTKB|Q9KT92 - symbol:VC_1011 "Endonuclease III" spec... 193 2.6e-15 1
TIGR_CMR|VC_1011 - symbol:VC_1011 "endonuclease III" spec... 193 2.6e-15 1
TIGR_CMR|SPO_3581 - symbol:SPO_3581 "endonuclease III" sp... 191 4.2e-15 1
TIGR_CMR|NSE_0246 - symbol:NSE_0246 "endonuclease III" sp... 184 2.3e-14 1
TIGR_CMR|CPS_4148 - symbol:CPS_4148 "A/G-specific adenine... 170 2.8e-12 1
TIGR_CMR|CJE_1792 - symbol:CJE_1792 "A/G-specific adenine... 164 1.1e-11 1
UNIPROTKB|Q9KUR3 - symbol:VC_0452 "A/G-specific adenine g... 164 1.2e-11 1
TIGR_CMR|VC_0452 - symbol:VC_0452 "A/G-specific adenine g... 164 1.2e-11 1
TIGR_CMR|SO_3368 - symbol:SO_3368 "A/G-specific adenine g... 164 1.3e-11 1
TIGR_CMR|CBU_0940 - symbol:CBU_0940 "A/G-specific adenine... 151 1.3e-09 1
POMBASE|SPAC26A3.02 - symbol:myh1 "adenine DNA glycosylas... 151 2.3e-09 1
UNIPROTKB|J9P6R3 - symbol:NTHL1 "Uncharacterized protein"... 146 3.5e-09 1
TIGR_CMR|SPO_3448 - symbol:SPO_3448 "A/G-specific adenine... 149 3.7e-09 1
TIGR_CMR|BA_0522 - symbol:BA_0522 "A/G-specific adenine g... 145 1.9e-08 1
UNIPROTKB|P17802 - symbol:mutY "adenine glycosylase; G.C ... 137 2.5e-07 1
GENEDB_PFALCIPARUM|PF11_0306 - symbol:PF11_0306 "A/G-spec... 135 1.2e-06 1
UNIPROTKB|Q8II68 - symbol:PF11_0306 "A/G-specific adenine... 135 1.2e-06 1
UNIPROTKB|Q3Z642 - symbol:DET1612 "DNA repair protein, Hh... 122 6.1e-06 1
TIGR_CMR|DET_1612 - symbol:DET_1612 "DNA repair protein, ... 122 6.1e-06 1
UNIPROTKB|O53574 - symbol:mutY "PROBABLE ADENINE GLYCOSYL... 125 6.6e-06 1
DICTYBASE|DDB_G0270764 - symbol:myh "monofunctional DNA g... 127 1.1e-05 1
UNIPROTKB|F1P514 - symbol:MUTYH "Uncharacterized protein"... 120 4.6e-05 1
UNIPROTKB|E1BZT8 - symbol:MUTYH "Uncharacterized protein"... 120 5.8e-05 1
UNIPROTKB|Q746Z0 - symbol:nth "Endonuclease III-related p... 108 0.00033 1
TIGR_CMR|GSU_3377 - symbol:GSU_3377 "helix-hairpin-helix ... 108 0.00033 1
UNIPROTKB|Q5T413 - symbol:MUTYH "A/G-specific adenine DNA... 110 0.00041 1
UNIPROTKB|Q5T418 - symbol:MUTYH "A/G-specific adenine DNA... 107 0.00044 1
RGD|620045 - symbol:Mutyh "mutY homolog (E. coli)" specie... 113 0.00047 1
UNIPROTKB|Q8R5G2 - symbol:Mutyh "A/G-specific adenine DNA... 113 0.00047 1
>TAIR|locus:2061345 [details] [associations]
symbol:ATNTH1 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP002685 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
EMBL:AC007169 GO:GO:0004519 GO:GO:0042644 GO:GO:0019104 KO:K10773
IPI:IPI00540590 PIR:H84720 RefSeq:NP_565725.1 UniGene:At.10180
HSSP:P20625 ProteinModelPortal:Q9SIC4 SMR:Q9SIC4 STRING:Q9SIC4
PRIDE:Q9SIC4 EnsemblPlants:AT2G31450.1 GeneID:817703
KEGG:ath:AT2G31450 TAIR:At2g31450 InParanoid:Q9SIC4 OMA:DIEDFAY
PhylomeDB:Q9SIC4 ProtClustDB:CLSN2688602 Genevestigator:Q9SIC4
Uniprot:Q9SIC4
Length = 379
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 147/207 (71%), Positives = 173/207 (83%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G D+ S LPP ERRFAV TKD+V + A+ RL QNGL T EA+DKAD
Sbjct: 154 PVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKAD 213
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA MKKIA+ICL KYDGDIPSSLD+LL+LPGIGPKMA++++ +
Sbjct: 214 ESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHI 273
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGTKQKT+SPE+TR ALQ+WLPKEEWV INPLLV
Sbjct: 274 AWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLV 333
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAF 212
GFGQ ICTP+RPRC C+VS+ CP+AF
Sbjct: 334 GFGQMICTPIRPRCEACSVSKLCPAAF 360
>TAIR|locus:2198738 [details] [associations]
symbol:NTH2 "endonuclease III 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS;IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] [GO:0042644 "chloroplast nucleoid" evidence=IDA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 EMBL:CP002684 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0004519
GO:GO:0042644 GO:GO:0019104 KO:K10773 EMBL:AK316958 IPI:IPI00534650
RefSeq:NP_973767.1 UniGene:At.26529 ProteinModelPortal:B9DFZ0
PRIDE:B9DFZ0 EnsemblPlants:AT1G05900.2 GeneID:837100
KEGG:ath:AT1G05900 TAIR:At1g05900 OMA:CGINNIC PhylomeDB:B9DFZ0
Genevestigator:Q3EDI2 Uniprot:B9DFZ0
Length = 386
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 145/214 (67%), Positives = 173/214 (80%)
Query: 1 MKTLE--PVYSLGVDETDSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTA 58
MK E PV ++ D T S LPPKERRF V TK+ + A++RL QNGL T
Sbjct: 154 MKPSEEAPVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTP 213
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
EAIDKADE+TIK+LIYPV FYTRKA N+KK+AKICL +YDGDIP +L+ELL+LPG+GPK+
Sbjct: 214 EAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKI 273
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A++V+ + W +VQGICVDTHVHRICNRLGWV++PGTKQKTSSPE+TR ALQ+WLPK EWV
Sbjct: 274 AHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWV 333
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAF 212
IN LLVGFGQTICTPLRP CG C+++E CPSAF
Sbjct: 334 AINFLLVGFGQTICTPLRPHCGTCSITEICPSAF 367
>UNIPROTKB|E2QX23 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913 EMBL:AAEX03004629
RefSeq:XP_853674.1 Ensembl:ENSCAFT00000030911 GeneID:610981
KEGG:cfa:610981 Uniprot:E2QX23
Length = 312
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 105/207 (50%), Positives = 135/207 (65%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ D S PPK +R+ V TKD+V GA+QRL +GL T ++I +
Sbjct: 109 PVDWLGVEHCHDPSAPPKVQRYQVLLSLMLSSQTKDQVTAGAMQRLRAHGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGSLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W T+ T+SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TRTTTTSPEKTRAALEEWLPRELWGEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRCG C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCGACLNRSLCPAA 309
>UNIPROTKB|Q2KID2 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005634 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 GO:GO:0019104 KO:K10773 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209 OMA:CLNQALC
EMBL:BC112681 IPI:IPI00689580 RefSeq:NP_001039862.1 UniGene:Bt.6550
ProteinModelPortal:Q2KID2 STRING:Q2KID2 PRIDE:Q2KID2
Ensembl:ENSBTAT00000049780 GeneID:535203 KEGG:bta:535203 CTD:4913
HOVERGEN:HBG052675 InParanoid:Q2KID2 OrthoDB:EOG4933JH
NextBio:20876660 Uniprot:Q2KID2
Length = 305
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/207 (50%), Positives = 132/207 (63%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PK RR+ V TKD+V GA+QRL GL T ++I +
Sbjct: 102 PVDQLGAEHCFDPSASPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 160
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +YDGDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 161 DDSTLGALIYPVGFWRSKVKYIKQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMA 220
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 221 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRRALEEWLPRELWSEINGLL 275
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 276 VGFGQQTCLPIRPRCQACLNRALCPAA 302
>UNIPROTKB|P78549 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IDA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006284 "base-excision repair" evidence=TAS]
[GO:0045008 "depyrimidination" evidence=TAS] Reactome:REACT_216
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005739 GO:GO:0005654 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 GO:GO:0045008 eggNOG:COG0177 GO:GO:0019104
KO:K10773 GO:GO:0006296 EMBL:AB014460 EMBL:AC005600
HOGENOM:HOG000252209 OMA:CLNQALC CTD:4913 HOVERGEN:HBG052675
OrthoDB:EOG4933JH EMBL:U79718 EMBL:AF498098 EMBL:AB001575
EMBL:U81285 EMBL:BC003014 EMBL:BC000391 EMBL:Y09687 IPI:IPI00001722
RefSeq:NP_002519.1 UniGene:Hs.66196 ProteinModelPortal:P78549
SMR:P78549 STRING:P78549 PhosphoSite:P78549 DMDM:29840795
PaxDb:P78549 PRIDE:P78549 Ensembl:ENST00000219066 GeneID:4913
KEGG:hsa:4913 UCSC:uc002col.1 GeneCards:GC16M002089 HGNC:HGNC:8028
HPA:CAB025152 MIM:602656 neXtProt:NX_P78549 PharmGKB:PA31811
InParanoid:P78549 PhylomeDB:P78549 GenomeRNAi:4913 NextBio:18903
ArrayExpress:P78549 Bgee:P78549 CleanEx:HS_NTHL1
Genevestigator:P78549 GermOnline:ENSG00000065057 Uniprot:P78549
Length = 312
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 105/207 (50%), Positives = 131/207 (63%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ V TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 283 VGFGQQTCLPVHPRCHACLNQALCPAA 309
>UNIPROTKB|F1RFB3 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019104 "DNA N-glycosylase activity" evidence=IEA]
[GO:0006296 "nucleotide-excision repair, DNA incision, 5'-to
lesion" evidence=IEA] [GO:0006285 "base-excision repair, AP site
formation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690
GO:GO:0004519 GO:GO:0003906 GO:GO:0019104 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC
EMBL:FP102350 Ensembl:ENSSSCT00000008810 Uniprot:F1RFB3
Length = 313
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 103/208 (49%), Positives = 133/208 (63%)
Query: 6 PVYSLGVDET-DSSLPPKE-RRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDK 63
PV LG + D S PPK+ RR+ V TKD+V GA+QRL +GL T ++I +
Sbjct: 109 PVDQLGAEHCYDPSAPPKQVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAHGL-TVDSILQ 167
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
D++T+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 MDDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAM 227
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
+ W V GI VDTHVHRI RL W TK+ T SPE+TR AL+ WLP+E W IN L
Sbjct: 228 AVAWGTVSGIAVDTHVHRIAGRLKW-----TKKATKSPEKTRTALEEWLPRELWSEINGL 282
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LVGFGQ C P+RPRC C CP+A
Sbjct: 283 LVGFGQQTCLPVRPRCQACLNRALCPAA 310
>MGI|MGI:1313275 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=ISO;IDA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006285 "base-excision
repair, AP site formation" evidence=ISO] [GO:0006296
"nucleotide-excision repair, DNA incision, 5'-to lesion"
evidence=ISO;IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016798
"hydrolase activity, acting on glycosyl bonds" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 MGI:MGI:1313275 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0004519 GO:GO:0003906
BRENDA:4.2.99.18 eggNOG:COG0177 GO:GO:0019104 GO:GO:0006296
HOGENOM:HOG000252209 HOVERGEN:HBG052675 OrthoDB:EOG4933JH
EMBL:AB006812 EMBL:AB009371 EMBL:AJ001617 EMBL:Y09688 EMBL:AK033701
IPI:IPI00136370 UniGene:Mm.148315 ProteinModelPortal:O35980
SMR:O35980 STRING:O35980 PhosphoSite:O35980 PRIDE:O35980
InParanoid:O35980 ChiTaRS:NTHL1 CleanEx:MM_NTHL1
Genevestigator:O35980 GermOnline:ENSMUSG00000041429 Uniprot:O35980
Length = 300
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 100/207 (48%), Positives = 131/207 (63%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D+S PPK RR+ V TKD+V GA+QRL GL T E+I +
Sbjct: 97 PVDQLGAEHCYDASAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 155
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 156 DDDTLGRLIYPVGFWRNKVKYIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 215
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VDTHVHRI NRL W TK+ T +PE+TR+ L+ WLP+ W +N LL
Sbjct: 216 VAWGTISGIAVDTHVHRIANRLRW-----TKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 270
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 271 VGFGQQICLPVHPRCQACLNKALCPAA 297
>RGD|1309289 [details] [associations]
symbol:Nthl1 "nth (endonuclease III)-like 1 (E.coli)"
species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
binding" evidence=IEA;ISO] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IEA;ISO] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006285 "base-excision repair, AP site formation"
evidence=IEA;ISO] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA;ISO] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA;ISO] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 RGD:1309289 GO:GO:0005739 GO:GO:0005634
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 EMBL:CH473948 GO:GO:0019104 KO:K10773 GO:GO:0006296
GO:GO:0006285 GeneTree:ENSGT00510000047513 OMA:CLNQALC CTD:4913
OrthoDB:EOG4933JH IPI:IPI00189546 RefSeq:NP_001099198.1
UniGene:Rn.14632 Ensembl:ENSRNOT00000016490 GeneID:29541
KEGG:rno:29541 UCSC:RGD:1309289 NextBio:609539 Uniprot:D4A4E8
Length = 300
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 101/207 (48%), Positives = 129/207 (62%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG ++ D + PPK RR+ V TKD+V GA+QRL GL T E+I +
Sbjct: 97 PVDQLGAEQCYDITAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 155
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ + LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 156 DDDLLGRLIYPVGFWRSKVKFIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 215
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR L+ WLP+ W IN LL
Sbjct: 216 VAWGTVSGIAVDTHVHRIANRLKW-----TKKMTKSPEETRRNLEEWLPRVLWSEINGLL 270
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 271 VGFGQQICLPVHPRCQACLNKALCPAA 297
>UNIPROTKB|F1NQP6 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA] [GO:0006296 "nucleotide-excision repair, DNA
incision, 5'-to lesion" evidence=IEA] [GO:0019104 "DNA
N-glycosylase activity" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0005739 GO:GO:0005634 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0051539 GO:GO:0003690 GO:GO:0004519 GO:GO:0003906
GO:GO:0019104 GO:GO:0006296 GO:GO:0006285
GeneTree:ENSGT00510000047513 OMA:CLNQALC EMBL:AADN02023662
IPI:IPI00602448 Ensembl:ENSGALT00000009013 ArrayExpress:F1NQP6
Uniprot:F1NQP6
Length = 251
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 98/207 (47%), Positives = 132/207 (63%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +GVD+ D+S PP+ R+ V TKD+V A+ RL Q GL T ++I +
Sbjct: 48 PVDEMGVDKCYDTSAPPQVMRYQVLLSLMLSSQTKDQVTSAAMLRLRQRGL-TVDSILQM 106
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ +IYPV F+ K +K+ I KY GDIP +++EL+ LPG+GPKMA++ M
Sbjct: 107 DDATLGQIIYPVGFWRNKVKYIKQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMN 166
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W +V GI VDTHVHRI NRL WV K++T PE+TR AL+ WLP++ W IN LL
Sbjct: 167 IAWNSVSGIAVDTHVHRITNRLKWV-----KKETRYPEETRVALEDWLPRDLWREINWLL 221
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C + CP+A
Sbjct: 222 VGFGQQTCLPVNPRCKECLNQDICPTA 248
>DICTYBASE|DDB_G0277247 [details] [associations]
symbol:apnB "putative endonuclease III" species:44689
"Dictyostelium discoideum" [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 dictyBase:DDB_G0277247
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0051539 GO:GO:0004519
EMBL:AAFI02000019 eggNOG:COG0177 KO:K10773 OMA:CSECLNK
RefSeq:XP_642760.1 ProteinModelPortal:Q86K43 STRING:Q86K43
EnsemblProtists:DDB0232975 GeneID:8620949 KEGG:ddi:DDB_G0277247
InParanoid:Q86K43 ProtClustDB:CLSZ2846854 Uniprot:Q86K43
Length = 349
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 95/209 (45%), Positives = 130/209 (62%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEA 60
+ L PV +LG + ++ P E+RF + TKD + A+ RL + GL T +
Sbjct: 130 ENLAPVDTLGAESFNQDNIEPIEKRFHILVGCLLSSQTKDAITHAAVVRLKEYGL-TVDK 188
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ D ++ L+YPV FY RKA +KKIA+I KY+GDIP + E+ LPGIGPKM N
Sbjct: 189 MLTIDTNELETLLYPVGFYKRKAIYLKKIAEILKNKYNGDIPPTFKEIEQLPGIGPKMTN 248
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+++ + W V+GI VD H+HRI NRLGWV KT +PE+T + L+ WLPKE W +
Sbjct: 249 LIVQIAWGRVEGIAVDVHMHRISNRLGWV-------KTKTPEETMKDLESWLPKENWATV 301
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
N LLVGFGQTIC+P+ P+C C V+ CP
Sbjct: 302 NHLLVGFGQTICSPVNPKCSNCLVNNLCP 330
>ZFIN|ZDB-GENE-120511-4 [details] [associations]
symbol:nthl1 "nth endonuclease III-like 1 (E. coli)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 ZFIN:ZDB-GENE-120511-4
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 GeneTree:ENSGT00510000047513 EMBL:CABZ01067150
EMBL:CABZ01067151 IPI:IPI00628612 Ensembl:ENSDART00000062941
Bgee:F1QBP9 Uniprot:F1QBP9
Length = 402
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 93/207 (44%), Positives = 132/207 (63%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G ++ D+ P+ RR+ V TKD+V GA+QRL ++GL + + I K
Sbjct: 119 PVDQMGAEKCYDTQGLPEVRRYQVLISLMLSSQTKDQVTAGAMQRLREHGL-SVDGILKM 177
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ + ++ GDIP++++ L+ LPG+GPKMA++ M
Sbjct: 178 DDETLGKLIYPVGFWRTKVKYIKQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMD 237
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW TK++T +PE+TR AL+ WLP++ W IN LL
Sbjct: 238 IAWNQVSGIGVDTHVHRISNRLGW-----TKKETKTPEETRRALEEWLPRDLWSEINWLL 292
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ +C P+ P C +C CPSA
Sbjct: 293 VGFGQQVCLPVGPLCSVCLNQHTCPSA 319
>WB|WBGene00011201 [details] [associations]
symbol:nth-1 species:6239 "Caenorhabditis elegans"
[GO:0006281 "DNA repair" evidence=IEA;IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=IDA] [GO:0045008
"depyrimidination" evidence=IDA] [GO:0034042 "5-formyluracil DNA
N-glycosylase activity" evidence=IDA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IDA]
[GO:0070301 "cellular response to hydrogen peroxide" evidence=IGI]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0005634 GO:GO:0070301 GO:GO:0046872 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0004519 GO:GO:0045008
eggNOG:COG0177 EMBL:Z50874 GeneTree:ENSGT00510000047513
HOGENOM:HOG000252209 EMBL:AB518695 PIR:T24131 RefSeq:NP_001254906.1
RefSeq:NP_001254907.1 RefSeq:NP_001254908.1 RefSeq:NP_001254909.1
UniGene:Cel.10201 ProteinModelPortal:P54137 SMR:P54137
STRING:P54137 EnsemblMetazoa:R10E4.5d GeneID:187770
KEGG:cel:CELE_R10E4.5 CTD:187770 WormBase:R10E4.5a
WormBase:R10E4.5b WormBase:R10E4.5c WormBase:R10E4.5d
InParanoid:P54137 OMA:CLNQALC NextBio:936446 ArrayExpress:P54137
GO:GO:0034042 GO:GO:0034043 Uniprot:P54137
Length = 298
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 96/210 (45%), Positives = 128/210 (60%)
Query: 4 LEPVYSLGVDE-TDSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAID 62
+ PV ++G + D P RF V T+D+V A++RL +GL + ++
Sbjct: 45 IAPVDTMGCHKLADPLAAPPVHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGLSIGKILE 104
Query: 63 -KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
K + ++ ++ PV FY RKA ++K AKI + GDIP SLD L ALPG+GPKMAN+
Sbjct: 105 FKVPD--LETILCPVGFYKRKAVYLQKTAKILKDDFSGDIPDSLDGLCALPGVGPKMANL 162
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
VM + W GI VDTHVHRI NRLGW+ KTS+PE+T++AL+ LPK EW IN
Sbjct: 163 VMQIAWGECVGIAVDTHVHRISNRLGWI-------KTSTPEKTQKALEILLPKSEWQPIN 215
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVGFGQ C P+RP+CG C CPS+
Sbjct: 216 HLLVGFGQMQCQPVRPKCGTCLCRFTCPSS 245
>FB|FBgn0032907 [details] [associations]
symbol:CG9272 species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000703 "oxidized
pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 EMBL:AE014134 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0006974 GO:GO:0051539 GO:GO:0004519 KO:K10773
GeneTree:ENSGT00510000047513 RefSeq:NP_610078.2
ProteinModelPortal:Q9VIH0 SMR:Q9VIH0 IntAct:Q9VIH0 STRING:Q9VIH0
EnsemblMetazoa:FBtr0089944 GeneID:35365 KEGG:dme:Dmel_CG9272
UCSC:CG9272-RA FlyBase:FBgn0032907 InParanoid:Q9VIH0 OMA:QTICTPV
OrthoDB:EOG4ZGMV5 PhylomeDB:Q9VIH0 GenomeRNAi:35365 NextBio:793173
ArrayExpress:Q9VIH0 Bgee:Q9VIH0 Uniprot:Q9VIH0
Length = 388
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 90/207 (43%), Positives = 124/207 (59%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D K +RF TKD+ A+ RL GL T + +
Sbjct: 176 PVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAMNRLKDRGL-TPLKVKEM 234
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +K+ +I KY DIP ++ +L+ALPG+GPKMA++ M
Sbjct: 235 PVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVKDLVALPGVGPKMAHICMA 294
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHR+ NRLGWV +P TK+ PEQTR AL++WLP W +N L
Sbjct: 295 VAWNKITGIGVDVHVHRLSNRLGWVPKP-TKE----PEQTRVALEKWLPFSLWSEVNHLF 349
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQTICTP++P CG C + CPSA
Sbjct: 350 VGFGQTICTPVKPNCGECLNKDICPSA 376
>POMBASE|SPAC30D11.07 [details] [associations]
symbol:nth1 "DNA endonuclease III" species:4896
"Schizosaccharomyces pombe" [GO:0000703 "oxidized pyrimidine
nucleobase lesion DNA N-glycosylase activity" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=ISS] [GO:0006285
"base-excision repair, AP site formation" evidence=IMP;IDA]
[GO:0008534 "oxidized purine nucleobase lesion DNA N-glycosylase
activity" evidence=IMP] [GO:0034039 "8-oxo-7,8-dihydroguanine DNA
N-glycosylase activity" evidence=IDA] [GO:0034042 "5-formyluracil
DNA N-glycosylase activity" evidence=IDA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 PomBase:SPAC30D11.07
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005759
GO:GO:0046872 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 eggNOG:COG0177 KO:K10773 GO:GO:0034039 GO:GO:0006285
HOGENOM:HOG000252209 OrthoDB:EOG4T1MWS GO:GO:0034042 GO:GO:0034043
EMBL:AB191154 PIR:JC6066 RefSeq:NP_593210.1
ProteinModelPortal:Q09907 STRING:Q09907 EnsemblFungi:SPAC30D11.07.1
GeneID:2543510 KEGG:spo:SPAC30D11.07 OMA:CSECLNK NextBio:20804520
Uniprot:Q09907
Length = 355
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 93/216 (43%), Positives = 117/216 (54%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRL---LQNGLHTA 58
K + PV G PK+ RF TKD V ++ L L GL
Sbjct: 25 KVVAPVDVQGCHTLGERNDPKKFRFQTLVALMLSSQTKDIVLGPTMRNLKEKLAGGL-CL 83
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E I DE ++ LI V F+ RK +K++A+I K+ GDIP ++++L+ LPG+GPKM
Sbjct: 84 EDIQNIDEVSLNKLIEKVGFHNRKTIYLKQMARILSEKFQGDIPDTVEDLMTLPGVGPKM 143
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
+ M++ W GI VD HVHRICN L W T + EQTR ALQ WLPKE W
Sbjct: 144 GYLCMSIAWNKTVGIGVDVHVHRICNLLHWCN-------TKTEEQTRAALQSWLPKELWF 196
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAF 212
+N LVGFGQTIC P RC MCT+S CPSAF
Sbjct: 197 ELNHTLVGFGQTICLPRGRRCDMCTLSSKGLCPSAF 232
>UNIPROTKB|H3BPD5 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0004519 HGNC:HGNC:8028 EMBL:AC093513 Ensembl:ENST00000566380
Uniprot:H3BPD5
Length = 236
Score = 357 (130.7 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 69/127 (54%), Positives = 85/127 (66%)
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGIC-VDTHVHRICN 144
+K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M + W V GI VDTHVHRI N
Sbjct: 112 IKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMAVAWGTVSGIAAVDTHVHRIAN 171
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RL W TK+ T SPE+TR AL+ WLP+E W IN LLVGFGQ C P+ PRC C
Sbjct: 172 RLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLPVHPRCHACLN 226
Query: 205 SEYCPSA 211
CP+A
Sbjct: 227 QALCPAA 233
Score = 43 (20.2 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 6 PVYSLGVDET-DSSLPPKER 24
PV LG + DSS PPK +
Sbjct: 89 PVDHLGTEHCYDSSAPPKSK 108
>TIGR_CMR|GSU_1450 [details] [associations]
symbol:GSU_1450 "endonuclease III, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0004519 GO:GO:0016798 KO:K10773
HOGENOM:HOG000252209 RefSeq:NP_952501.2 GeneID:2687781
KEGG:gsu:GSU1450 PATRIC:22025743 ProtClustDB:CLSK2306769
BioCyc:GSUL243231:GH27-1429-MONOMER Uniprot:Q74D69
Length = 218
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 80/183 (43%), Positives = 108/183 (59%)
Query: 26 FAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F V T+D+ A +RL T A+ + + I+ IYPV FY KA
Sbjct: 36 FKVLVSCILSLRTQDRTTGPASERLFALA-DTPAAMVRLSKDDIEKAIYPVGFYHTKAEQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I ++ L +YDG +P LDELLA G+G K AN+V+TLG F GICVDTHVHRICNR
Sbjct: 95 ILEICRVLLERYDGGVPDELDELLAFKGVGRKTANLVITLG-FGKPGICVDTHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G++ +T +PEQT +L+R LP W+ IN LV FGQ CTP+ PRC C ++
Sbjct: 154 WGYI-------RTKTPEQTEFSLRRILPHRYWLVINDYLVTFGQNHCTPVSPRCSTCVLA 206
Query: 206 EYC 208
++C
Sbjct: 207 QWC 209
>CGD|CAL0001822 [details] [associations]
symbol:NTG1 species:5476 "Candida albicans" [GO:0000703
"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISA] [GO:0006285 "base-excision repair, AP site formation"
evidence=IEA;ISA] [GO:0005634 "nucleus" evidence=IEA] [GO:0034043
"5-hydroxymethyluracil DNA N-glycosylase activity" evidence=IEA]
[GO:0034039 "8-oxo-7,8-dihydroguanine DNA N-glycosylase activity"
evidence=IEA] [GO:0034042 "5-formyluracil DNA N-glycosylase
activity" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 CGD:CAL0001822 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0004519
eggNOG:COG0177 KO:K10773 GO:GO:0000703 GO:GO:0006285
RefSeq:XP_717561.1 RefSeq:XP_717635.1 ProteinModelPortal:Q5A763
STRING:Q5A763 GeneID:3640746 GeneID:3640793 KEGG:cal:CaO19.12564
KEGG:cal:CaO19.5098 Uniprot:Q5A763
Length = 320
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 79/192 (41%), Positives = 111/192 (57%)
Query: 21 PKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGL---HT----AEAIDKADEATIKDLI 73
PK RF + TKD+V A++ L NGL H E++ K E+ I I
Sbjct: 95 PKIYRFQLLISLMLSSQTKDEVNYEAMKNL-HNGLLKVHPDGLCIESVLKLSESEIDAYI 153
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V F+ RKA ++K I + +DGDIP +++E++ALPG+GPKM +++ GW GI
Sbjct: 154 KKVGFHNRKAQYIRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGI 213
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD H+HR+ GWV+ P K ++PE+ R LQ WLPK+ W INPL+VGFGQ IC
Sbjct: 214 GVDVHLHRLALMWGWVS-P----KANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICV 268
Query: 194 PLRPRCGMCTVS 205
P C +CT++
Sbjct: 269 PRAANCDICTLA 280
>UNIPROTKB|Q5A763 [details] [associations]
symbol:NTG1 "Putative uncharacterized protein NTG1"
species:237561 "Candida albicans SC5314" [GO:0000703 "oxidized
pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISA] [GO:0006285 "base-excision repair, AP site formation"
evidence=ISA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 CGD:CAL0001822 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0004519
eggNOG:COG0177 KO:K10773 GO:GO:0000703 GO:GO:0006285
RefSeq:XP_717561.1 RefSeq:XP_717635.1 ProteinModelPortal:Q5A763
STRING:Q5A763 GeneID:3640746 GeneID:3640793 KEGG:cal:CaO19.12564
KEGG:cal:CaO19.5098 Uniprot:Q5A763
Length = 320
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 79/192 (41%), Positives = 111/192 (57%)
Query: 21 PKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGL---HT----AEAIDKADEATIKDLI 73
PK RF + TKD+V A++ L NGL H E++ K E+ I I
Sbjct: 95 PKIYRFQLLISLMLSSQTKDEVNYEAMKNL-HNGLLKVHPDGLCIESVLKLSESEIDAYI 153
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V F+ RKA ++K I + +DGDIP +++E++ALPG+GPKM +++ GW GI
Sbjct: 154 KKVGFHNRKAQYIRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGI 213
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD H+HR+ GWV+ P K ++PE+ R LQ WLPK+ W INPL+VGFGQ IC
Sbjct: 214 GVDVHLHRLALMWGWVS-P----KANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICV 268
Query: 194 PLRPRCGMCTVS 205
P C +CT++
Sbjct: 269 PRAANCDICTLA 280
>SGD|S000005403 [details] [associations]
symbol:NTG2 "DNA N-glycosylase and apurinic/apyrimidinic (AP)
lyase" species:4932 "Saccharomyces cerevisiae" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IEA;IDA] [GO:0006285
"base-excision repair, AP site formation" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000703 "oxidized pyrimidine
nucleobase lesion DNA N-glycosylase activity" evidence=ISS;IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016798 "hydrolase activity, acting on glycosyl
bonds" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 SGD:S000005403 GO:GO:0005634 EMBL:BK006948
GO:GO:0046872 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519
eggNOG:COG0177 KO:K10773 GO:GO:0000703 GO:GO:0006285
GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209 EMBL:Z74785
PIR:S66728 RefSeq:NP_014599.1 ProteinModelPortal:Q08214 SMR:Q08214
DIP:DIP-2956N IntAct:Q08214 MINT:MINT-570318 STRING:Q08214
PeptideAtlas:Q08214 EnsemblFungi:YOL043C GeneID:854114
KEGG:sce:YOL043C CYGD:YOL043c OMA:CDLCLAN OrthoDB:EOG4T1MWS
NextBio:975807 Genevestigator:Q08214 GermOnline:YOL043C
Uniprot:Q08214
Length = 380
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 80/196 (40%), Positives = 107/196 (54%)
Query: 21 PKERRFAVXXXXXXXXXTKD-KVADGALQ--RLLQNGLHTAEAID-----KADEATIKDL 72
PK R T+D ++A AL N L AE I K DE + +L
Sbjct: 144 PKNFRLQFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANL 203
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V+FYTRKA +K+ A++ + +D DIP ++ +L+LPG+GPKM + + GW + G
Sbjct: 204 IRCVSFYTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIAG 263
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
ICVD HVHR+C WV P K KT+ E TR+ LQ WLP W IN +LVGFGQ IC
Sbjct: 264 ICVDVHVHRLCKMWNWV-DP-IKCKTA--EHTRKELQVWLPHSLWYEINTVLVGFGQLIC 319
Query: 193 TPLRPRCGMCTVSEYC 208
RC +C ++ C
Sbjct: 320 MARGKRCDLCLANDVC 335
>SGD|S000000013 [details] [associations]
symbol:NTG1 "DNA N-glycosylase and apurinic/apyrimidinic (AP)
lyase" species:4932 "Saccharomyces cerevisiae" [GO:0006284
"base-excision repair" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0008534 "oxidized purine
nucleobase lesion DNA N-glycosylase activity" evidence=IDA]
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=ISS;IDA] [GO:0006281 "DNA repair"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016798 "hydrolase activity,
acting on glycosyl bonds" evidence=IEA] [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=IDA] [GO:0090297
"positive regulation of mitochondrial DNA replication"
evidence=IMP] [GO:0034599 "cellular response to oxidative stress"
evidence=IMP] [GO:0006285 "base-excision repair, AP site formation"
evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 SGD:S000000013 GO:GO:0005739
GO:GO:0005634 EMBL:L05146 EMBL:BK006935 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0034599 GO:GO:0004519 eggNOG:COG0177 KO:K10773
GO:GO:0008534 GO:GO:0000703 GO:GO:0006285 GO:GO:0090297 PIR:S36719
RefSeq:NP_009387.1 ProteinModelPortal:P31378 SMR:P31378
DIP:DIP-6614N IntAct:P31378 MINT:MINT-673918 STRING:P31378
PaxDb:P31378 EnsemblFungi:YAL015C GeneID:851218 KEGG:sce:YAL015C
CYGD:YAL015c GeneTree:ENSGT00510000047513 HOGENOM:HOG000252209
OMA:LNIMRYC OrthoDB:EOG432477 NextBio:968109 Genevestigator:P31378
GermOnline:YAL015C Uniprot:P31378
Length = 399
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 71/181 (39%), Positives = 103/181 (56%)
Query: 19 LPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIK 70
+ P++ R V TKD+V A+ +++ + LH T EA+ + +E +
Sbjct: 137 ISPRDYRLQVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLD 196
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+TRKA + KI ++ D+P++++ELL LPG+GPKMA + + W +
Sbjct: 197 ELIHSVGFHTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKI 256
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GICVD HV R+ WV QK +P+QTR LQ WLPK W IN LLVGFGQ
Sbjct: 257 EGICVDVHVDRLTKLWKWVDA----QKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQI 312
Query: 191 I 191
I
Sbjct: 313 I 313
>UNIPROTKB|H3BRL9 [details] [associations]
symbol:NTHL1 "Endonuclease III-like protein 1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006284 "base-excision
repair" evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PROSITE:PS01155 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0003677 GO:GO:0004519 HGNC:HGNC:8028
EMBL:AC093513 Ensembl:ENST00000561841 Uniprot:H3BRL9
Length = 218
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 62/137 (45%), Positives = 83/137 (60%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ V TKD+V GA+QRL GL T ++I +
Sbjct: 75 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 133
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 134 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 193
Query: 125 LGWFNVQGI--CVDTHV 139
+ W V GI C H+
Sbjct: 194 VAWGTVSGIGVCGPDHL 210
>ASPGD|ASPL0000064583 [details] [associations]
symbol:AN10978 species:162425 "Emericella nidulans"
[GO:0006285 "base-excision repair, AP site formation" evidence=IEA]
[GO:0034599 "cellular response to oxidative stress" evidence=IEA]
[GO:0090297 "positive regulation of mitochondrial DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034043 "5-hydroxymethyluracil
DNA N-glycosylase activity" evidence=IEA] [GO:0034039
"8-oxo-7,8-dihydroguanine DNA N-glycosylase activity" evidence=IEA]
[GO:0034042 "5-formyluracil DNA N-glycosylase activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR004036 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00478
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:BN001304
GO:GO:0004519 HOGENOM:HOG000252209 EnsemblFungi:CADANIAT00000774
OMA:WHEINKL Uniprot:C8VC05
Length = 429
Score = 263 (97.6 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 54/118 (45%), Positives = 72/118 (61%)
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ LI V F+ K +KK A+I +Y+ DIPS+ EL+ LPG+GPKMA + M+ W
Sbjct: 270 LNSLIGTVGFHNNKTKYIKKAAEIIRDQYNSDIPSTPAELMKLPGVGPKMAYLCMSAAWG 329
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVG 186
+GI VD HVHRI N GW KT +PE+TR +L+ WLPK++W IN L G
Sbjct: 330 KHEGIGVDVHVHRITNLWGW-------HKTKTPEETRMSLESWLPKDKWHEINKLRCG 380
>UNIPROTKB|P63540 [details] [associations]
symbol:nth "Endonuclease III" species:1773 "Mycobacterium
tuberculosis" [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0005886 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 EMBL:BX842583 GO:GO:0006281
GO:GO:0051539 GO:GO:0005622 GO:GO:0003690 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 GO:GO:0019104 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 PIR:C70790 RefSeq:NP_218191.2 RefSeq:NP_338328.1
RefSeq:YP_006517162.1 ProteinModelPortal:P63540 SMR:P63540
PRIDE:P63540 EnsemblBacteria:EBMYCT00000000148
EnsemblBacteria:EBMYCT00000071122 GeneID:13317283 GeneID:885058
GeneID:926474 KEGG:mtc:MT3775 KEGG:mtu:Rv3674c KEGG:mtv:RVBD_3674c
PATRIC:18130064 TubercuList:Rv3674c HOGENOM:HOG000252208
ProtClustDB:CLSK799395 Uniprot:P63540
Length = 245
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 47/154 (30%), Positives = 86/154 (55%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGP 116
TA +AD ++ LI P FY KA ++ + + + ++ G++P+++D+L+ LPG+G
Sbjct: 71 TARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGR 130
Query: 117 KMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEE 176
K AN+++ F + GI VDTH R+ R W T P + +A+ + ++E
Sbjct: 131 KTANVILGNA-FGIPGITVDTHFGRLVRRWRWTT-------AEDPVKVEQAVGELIERKE 182
Query: 177 WVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
W ++ ++ G+ +C RP CG+C +++ CPS
Sbjct: 183 WTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPS 216
>TIGR_CMR|DET_0935 [details] [associations]
symbol:DET_0935 "endonuclease III" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
PIRSF:PIRSF001435 PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 RefSeq:YP_181660.1
ProteinModelPortal:Q3Z7Y9 STRING:Q3Z7Y9 GeneID:3229754
KEGG:det:DET0935 PATRIC:21608917 ProtClustDB:CLSK837188
BioCyc:DETH243164:GJNF-936-MONOMER Uniprot:Q3Z7Y9
Length = 218
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 51/154 (33%), Positives = 85/154 (55%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A A A ++ I F+ KA N+ A+ ++++ GD+P ++ ++L LPG+G K
Sbjct: 66 QAFADASLAELEQDIKSSGFFHNKALNIIGAARAVVSRFGGDVPRNMADMLTLPGVGRKT 125
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN+V+ + V+GI VDTHV R+ RLG T + P + + L +P+ EW
Sbjct: 126 ANVVLHNAFGLVEGIAVDTHVKRLAGRLGLSTN-------TDPVKIEQDLMALIPRSEWG 178
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAF 212
+ L+ G+ +C +PRC C +++ CPSAF
Sbjct: 179 NFSYYLIDHGRAVCDAKKPRCPECVLNDICPSAF 212
>TIGR_CMR|CHY_1121 [details] [associations]
symbol:CHY_1121 "endonuclease III" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_359967.1
ProteinModelPortal:Q3AD17 STRING:Q3AD17 GeneID:3726382
KEGG:chy:CHY_1121 PATRIC:21275382
BioCyc:CHYD246194:GJCN-1120-MONOMER Uniprot:Q3AD17
Length = 210
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 54/150 (36%), Positives = 81/150 (54%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+ +D +E + I + Y KA N+ KIA+I +Y G +P S ELL LPG+GPK
Sbjct: 63 DLLDMGEEELSRQ-IRSLGLYRNKARNLIKIAEILDREYHGQVPDSFAELLKLPGVGPKT 121
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A +++ +G FN VDTHV R+ RLG +K +T PE L++ P W+
Sbjct: 122 AEVIVGVG-FNKPSFPVDTHVFRVARRLGL-----SKART--PEGVSFDLKKIFPPNSWI 173
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
++ L+ FG+ IC +P C +C E+C
Sbjct: 174 DLHHRLIFFGRRICKAQKPSCNICPFPEFC 203
>UNIPROTKB|Q97QE0 [details] [associations]
symbol:nth "Endonuclease III" species:170187 "Streptococcus
pneumoniae TIGR4" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000445 InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0005622 EMBL:AE005672 GenomeReviews:AE005672_GR
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625 PIR:D98016
PIR:F95148 RefSeq:NP_345743.1 ProteinModelPortal:Q97QE0
EnsemblBacteria:EBSTRT00000027009 GeneID:931793 KEGG:spn:SP_1279
PATRIC:19706957 ProtClustDB:CLSK884066 Uniprot:Q97QE0
Length = 209
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 61/198 (30%), Positives = 94/198 (47%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAI 61
K LE + +L D S F + T D + A L T +A+
Sbjct: 10 KVLEEIIALFPDAKPSL--DFTNHFELLVAVMLSAQTTDAAVNKATPGLFV-AFPTPQAM 66
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A E+ I I + Y KA +KK A+ L +DG +P + +EL +L G+G K AN+
Sbjct: 67 SVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGRKTANV 126
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
VM++G F + VDTHV RIC V +K+++P + + + LP E+W+ +
Sbjct: 127 VMSVG-FGIPAFAVDTHVERICKHHDIV------KKSATPLEVEKRVMDILPPEQWLAAH 179
Query: 182 PLLVGFGQTICTPLRPRC 199
++ FG+ IC P P C
Sbjct: 180 QAMIYFGRAICHPKNPEC 197
>TIGR_CMR|BA_1570 [details] [associations]
symbol:BA_1570 "endonuclease III" species:198094 "Bacillus
anthracis str. Ames" [GO:0000703 "oxidized pyrimidine nucleobase
lesion DNA N-glycosylase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
Pfam:PF10576 PIRSF:PIRSF001435 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0051539 GO:GO:0005622 GO:GO:0004519 GO:GO:0003906 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 HOGENOM:HOG000252208 HSSP:P20625
RefSeq:NP_844020.1 RefSeq:YP_018193.1 RefSeq:YP_027725.1
ProteinModelPortal:Q81SS5 SMR:Q81SS5 DNASU:1083694
EnsemblBacteria:EBBACT00000010838 EnsemblBacteria:EBBACT00000014468
EnsemblBacteria:EBBACT00000019730 GeneID:1083694 GeneID:2815568
GeneID:2851771 KEGG:ban:BA_1570 KEGG:bar:GBAA_1570 KEGG:bat:BAS1456
ProtClustDB:CLSK2521133 BioCyc:BANT260799:GJAJ-1530-MONOMER
BioCyc:BANT261594:GJ7F-1594-MONOMER Uniprot:Q81SS5
Length = 215
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 47/136 (34%), Positives = 75/136 (55%)
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I + Y KA N++K+ ++ L Y+G++P DEL LPG+G K AN+V+++ F +
Sbjct: 77 IRSIGLYRNKAKNIQKLCRMLLDDYNGEVPKDRDELTKLPGVGRKTANVVVSVA-FGIPA 135
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VDTHV R+ RL + + K E+T L + +P +EW + ++ FG+ C
Sbjct: 136 IAVDTHVERVSKRLA-ICR--WKDSVLEVEKT---LMKKIPMDEWSVTHHRMIFFGRYHC 189
Query: 193 TPLRPRCGMCTVSEYC 208
RP+C C + E C
Sbjct: 190 KAQRPQCEECPLLEVC 205
>UNIPROTKB|P0AB83 [details] [associations]
symbol:nth "endonuclease III; specific for apurinic and/or
apyrimidinic sites" species:83333 "Escherichia coli K-12"
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0016798 "hydrolase activity, acting on glycosyl bonds"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=IEA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 GO:GO:0016798 eggNOG:COG0177
EMBL:J02857 PIR:A32412 RefSeq:NP_416150.1 RefSeq:YP_489897.1
PDB:2ABK PDBsum:2ABK ProteinModelPortal:P0AB83 SMR:P0AB83
DIP:DIP-48071N IntAct:P0AB83 MINT:MINT-1223379
EnsemblBacteria:EBESCT00000001176 EnsemblBacteria:EBESCT00000001177
EnsemblBacteria:EBESCT00000015357 GeneID:12933192 GeneID:947122
KEGG:ecj:Y75_p1610 KEGG:eco:b1633 PATRIC:32118568 EchoBASE:EB0656
EcoGene:EG10662 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
ProtClustDB:PRK10702 BioCyc:EcoCyc:EG10662-MONOMER
BioCyc:ECOL316407:JW1625-MONOMER EvolutionaryTrace:P0AB83
Genevestigator:P0AB83 TIGRFAMs:TIGR01083 Uniprot:P0AB83
Length = 211
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 49/140 (35%), Positives = 73/140 (52%)
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+K I + Y KA N+ K +I L +++G++P L ALPG+G K AN+V+ F
Sbjct: 72 VKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTA-F 130
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
I VDTH+ R+CNR + PG + EQ E L + +P E V + L+ G
Sbjct: 131 GWPTIAVDTHIFRVCNRTQFA--PG-----KNVEQVEEKLLKVVPAEFKVDCHHWLILHG 183
Query: 189 QTICTPLRPRCGMCTVSEYC 208
+ C +PRCG C + + C
Sbjct: 184 RYTCIARKPRCGSCIIEDLC 203
>TIGR_CMR|ECH_0857 [details] [associations]
symbol:ECH_0857 "endonuclease III" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0003906 eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_507652.1
ProteinModelPortal:Q2GFY1 SMR:Q2GFY1 STRING:Q2GFY1 GeneID:3928070
KEGG:ech:ECH_0857 PATRIC:20577124 ProtClustDB:CLSK749547
BioCyc:ECHA205920:GJNR-860-MONOMER Uniprot:Q2GFY1
Length = 210
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 45/143 (31%), Positives = 78/143 (54%)
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E +K+ I + Y K+ N+ ++ I + +++ ++P + L+ALPG+G K AN+ +
Sbjct: 69 EKGLKNYINTIGLYNSKSKNIIALSGIIINQHNSNVPLDFNTLVALPGVGRKSANVFLNT 128
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N+ + VDTHV R+ NR+G V K S+ +T +AL +PK+ + + LV
Sbjct: 129 -WLNLPTVAVDTHVFRVSNRIGLV-------KESNVLKTEDALLNVIPKKWLLYAHHWLV 180
Query: 186 GFGQTICTPLRPRCGMCTVSEYC 208
G+ +C +P C C V + C
Sbjct: 181 LHGRYVCKSRKPLCSQCVVQDLC 203
>TIGR_CMR|SO_2514 [details] [associations]
symbol:SO_2514 "endonuclease III" species:211586
"Shewanella oneidensis MR-1" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_718101.1
ProteinModelPortal:Q8EE75 SMR:Q8EE75 GeneID:1170225
KEGG:son:SO_2514 PATRIC:23524657 Uniprot:Q8EE75
Length = 231
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 47/153 (30%), Positives = 78/153 (50%)
Query: 56 HTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIG 115
+TA +I +K+ I + Y KA N+ K +I + KY+G++P + L +LPG+G
Sbjct: 59 NTAHSIYALGVEGLKEYIKTIGLYNNKAVNVIKACEILIEKYNGEVPEDREALESLPGVG 118
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKE 175
K AN+V+ F I VDTH+ R+ NR + PG + + E + + +P E
Sbjct: 119 RKTANVVLNTA-FGWPTIAVDTHIFRLANRTKFA--PG-----KNVVEVEERMLKVVPAE 170
Query: 176 EWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
V ++ + G+ C +PRCG C + + C
Sbjct: 171 FKVDVHHWFILHGRYTCLARKPRCGSCIIEDLC 203
>TIGR_CMR|APH_0897 [details] [associations]
symbol:APH_0897 "endonuclease III" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 PIRSF:PIRSF001435
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 ProtClustDB:CLSK749547 RefSeq:YP_505472.1
ProteinModelPortal:Q2GJH9 SMR:Q2GJH9 STRING:Q2GJH9 GeneID:3930592
KEGG:aph:APH_0897 PATRIC:20950500
BioCyc:APHA212042:GHPM-910-MONOMER Uniprot:Q2GJH9
Length = 209
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 52/146 (35%), Positives = 77/146 (52%)
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+ +K I + Y KA N+ ++++I Y G IP D L ALPG+G K AN+ +
Sbjct: 67 ESGLKRYINSIGLYNSKAKNIIQLSEIIENTYGGTIPRDFDALTALPGVGRKSANVFLN- 125
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW-VRINPLL 184
V I VDTHV R+ NR+G V + SS ++L++ +P E+W + + L
Sbjct: 126 SCLGVPTIAVDTHVFRVSNRIGLVQE-------SSVLGVEKSLEKVVP-EKWKLYAHHWL 177
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPS 210
V G+ +C P CG C VS+ C S
Sbjct: 178 VLHGRYVCKARTPLCGKCIVSDLCAS 203
>TIGR_CMR|CBU_1697 [details] [associations]
symbol:CBU_1697 "endonuclease III" species:227377
"Coxiella burnetii RSA 493" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539
GO:GO:0005622 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519
GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 RefSeq:NP_820678.1
ProteinModelPortal:Q83B22 SMR:Q83B22 PRIDE:Q83B22 GeneID:1209608
KEGG:cbu:CBU_1697 PATRIC:17932131 ProtClustDB:CLSK914967
BioCyc:CBUR227377:GJ7S-1668-MONOMER Uniprot:Q83B22
Length = 218
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+ +K I + Y KA N+ K KI + Y +P + +EL ALPG+G K AN+++
Sbjct: 69 ESGLKKYIKSIGLYNTKAKNIIKTCKILVENYHSKVPRTREELEALPGVGRKTANVILNT 128
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
F I VDTH+ R+ NR G + KT P + L +PK+ + LV
Sbjct: 129 A-FGEHAIAVDTHIFRVANRTGLA-----RGKT--PLAVEKKLMEVVPKKYLADAHHWLV 180
Query: 186 GFGQTICTPLRPRCGMCTVSEYC 208
G+ IC RP+C C +++ C
Sbjct: 181 LHGRYICIARRPKCSECLINDLC 203
>TIGR_CMR|CJE_0698 [details] [associations]
symbol:CJE_0698 "endonuclease III" species:195099
"Campylobacter jejuni RM1221" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS00764 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 PIR:B81407 RefSeq:YP_178710.1
ProteinModelPortal:Q5HVH5 STRING:Q5HVH5 GeneID:3231980
KEGG:cjr:CJE0698 PATRIC:20043124 ProtClustDB:CLSK872385
BioCyc:CJEJ195099:GJC0-715-MONOMER Uniprot:Q5HVH5
Length = 208
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 50/152 (32%), Positives = 81/152 (53%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+++ A+ +++K I +F+ KA N+ K+AK +DG+IP L +L G+G K
Sbjct: 60 KSLANANLSSLKTYIQTCSFFNNKAQNLIKMAKAVCENFDGEIPLDEQNLKSLAGVGQKT 119
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A++V+ + W + VDTHV R+ +RLG +K KT PE T E L R K+
Sbjct: 120 AHVVL-IEWCGANFMAVDTHVFRVSHRLGL-----SKAKT--PEATEEDLTRTF-KDNLN 170
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ +V FG+ C +P C C ++ C S
Sbjct: 171 YLHQAMVLFGRYTCKAKKPLCKECFLNHLCKS 202
>UNIPROTKB|Q9KT92 [details] [associations]
symbol:VC_1011 "Endonuclease III" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 PIR:A82252 RefSeq:NP_230657.1
ProteinModelPortal:Q9KT92 SMR:Q9KT92 DNASU:2614264 GeneID:2614264
KEGG:vch:VC1011 PATRIC:20081122 ProtClustDB:CLSK874181
Uniprot:Q9KT92
Length = 213
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+K+ I + + KA N+ K +I L K+ G++P + L ALPG+G K AN+V+ F
Sbjct: 72 VKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTA-F 130
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
I VDTH+ R+ NR + G + ++ L + +P E + ++ L+ G
Sbjct: 131 GWPTIAVDTHIFRVSNRTKFAV--G-----KNVDEVEHKLLKVVPNEFKLDVHHWLILHG 183
Query: 189 QTICTPLRPRCGMCTVSEYC 208
+ C +PRCG C + + C
Sbjct: 184 RYTCVARKPRCGSCIIEDLC 203
>TIGR_CMR|VC_1011 [details] [associations]
symbol:VC_1011 "endonuclease III" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PIRSF:PIRSF001435
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 HSSP:P20625 PIR:A82252 RefSeq:NP_230657.1
ProteinModelPortal:Q9KT92 SMR:Q9KT92 DNASU:2614264 GeneID:2614264
KEGG:vch:VC1011 PATRIC:20081122 ProtClustDB:CLSK874181
Uniprot:Q9KT92
Length = 213
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+K+ I + + KA N+ K +I L K+ G++P + L ALPG+G K AN+V+ F
Sbjct: 72 VKEYIKTIGLFNSKAENVIKTCRILLEKHQGEVPEDREALEALPGVGRKTANVVLNTA-F 130
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
I VDTH+ R+ NR + G + ++ L + +P E + ++ L+ G
Sbjct: 131 GWPTIAVDTHIFRVSNRTKFAV--G-----KNVDEVEHKLLKVVPNEFKLDVHHWLILHG 183
Query: 189 QTICTPLRPRCGMCTVSEYC 208
+ C +PRCG C + + C
Sbjct: 184 RYTCVARKPRCGSCIIEDLC 203
>TIGR_CMR|SPO_3581 [details] [associations]
symbol:SPO_3581 "endonuclease III" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478 SMART:SM00525
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 HOGENOM:HOG000252206 KO:K10773
OMA:NNKSKHL TIGRFAMs:TIGR01083 RefSeq:YP_168776.1
ProteinModelPortal:Q5LMI2 SMR:Q5LMI2 GeneID:3196325
KEGG:sil:SPO3581 PATRIC:23380639 ProtClustDB:CLSK934216
Uniprot:Q5LMI2
Length = 214
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGP 116
T E + E + + I + + +KA N+ K+++I + +Y G++P+S L +LPG+G
Sbjct: 64 TPEKMLALGEEGVTEHIKTIGLFRQKAKNVIKLSRILVEQYGGEVPNSRAALQSLPGVGR 123
Query: 117 KMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEE 176
K AN+V+ + W+ + VDTH+ R+ NR G PG T A++ +P +
Sbjct: 124 KTANVVLNM-WWRIPAQAVDTHIFRVGNRTGIC--PGKDVDT-----VERAIEDNIPADF 175
Query: 177 WVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ L+ G+ C +P CG C + + C
Sbjct: 176 QQHAHHWLILHGRYHCKARKPMCGTCLIRDLC 207
>TIGR_CMR|NSE_0246 [details] [associations]
symbol:NSE_0246 "endonuclease III" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003906 "DNA-(apurinic
or apyrimidinic site) lyase activity" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR003651 InterPro:IPR004036 InterPro:IPR005759
InterPro:IPR011257 Pfam:PF00730 PIRSF:PIRSF001435 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0051539 GO:GO:0005622
GO:GO:0004519 GO:GO:0003906 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0177 HOGENOM:HOG000252206 KO:K10773 OMA:NNKSKHL
TIGRFAMs:TIGR01083 RefSeq:YP_506140.1 ProteinModelPortal:Q2GEF6
STRING:Q2GEF6 GeneID:3931594 KEGG:nse:NSE_0246 PATRIC:22680583
ProtClustDB:CLSK2528191 BioCyc:NSEN222891:GHFU-276-MONOMER
Uniprot:Q2GEF6
Length = 216
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 49/147 (33%), Positives = 78/147 (53%)
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
K D A +K+ I + + KA N+ +AK ++ DIP++ L +LPGIG K AN++
Sbjct: 72 KMDLAKLKESIKTIGLHNNKAKNIIALAKKLISDKQTDIPNNFQYLQSLPGIGRKSANVI 131
Query: 123 M-TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
+ TL F + I VDTHV R+ NR+G V + E ++ L+ +PK + +
Sbjct: 132 LCTL--FGEKRIAVDTHVFRVSNRIGLV------HARNVLEVEKQLLEN-IPKTFLPQAH 182
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYC 208
LV G+ IC +P C C +++ C
Sbjct: 183 LWLVLHGRYICKARKPECKNCIINDLC 209
>TIGR_CMR|CPS_4148 [details] [associations]
symbol:CPS_4148 "A/G-specific adenine glycosylase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 RefSeq:YP_270802.1
ProteinModelPortal:Q47WM0 SMR:Q47WM0 STRING:Q47WM0 GeneID:3522464
KEGG:cps:CPS_4148 PATRIC:21471157 OMA:LPWRETY
BioCyc:CPSY167879:GI48-4160-MONOMER Uniprot:Q47WM0
Length = 362
Score = 170 (64.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 45/161 (27%), Positives = 78/161 (48%)
Query: 48 QRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDE 107
QR +++ T + ADE + + +Y R A N+ K AKI L YDG P +++
Sbjct: 62 QRFMES-FPTITDLANADEDVVLHHWTGLGYYAR-ARNLHKSAKIMLNDYDGHFPIEIEQ 119
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREA 167
++ALPGIG A +++L I +D +V R+ R ++ + G + + +
Sbjct: 120 VIALPGIGRSTAGAILSLSLKQYHPI-LDGNVKRVLAR-SYLVE-GYNGLSKFDKALWQL 176
Query: 168 LQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
++ P E N ++ G T+CT +P C +C V + C
Sbjct: 177 SEKLTPAIETDSFNQAMMDLGATVCTRSKPSCDICPVEQSC 217
>TIGR_CMR|CJE_1792 [details] [associations]
symbol:CJE_1792 "A/G-specific adenine glycosylase"
species:195099 "Campylobacter jejuni RM1221" [GO:0004844 "uracil
DNA N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 GO:GO:0051539 GO:GO:0005622 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0004519 GO:GO:0019104 KO:K03575
eggNOG:COG1194 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
RefSeq:YP_179763.1 ProteinModelPortal:Q5HSH2 STRING:Q5HSH2
GeneID:3232419 KEGG:cjr:CJE1792 PATRIC:20045396 OMA:WQGAGYY
ProtClustDB:CLSK879335 BioCyc:CJEJ195099:GJC0-1822-MONOMER
Uniprot:Q5HSH2
Length = 339
Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 55/212 (25%), Positives = 95/212 (44%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVXXXXXXXXXTKDK-VADGALQRLLQNGLHTAEA 60
KTL P +L D SL +R + V T+ K V + LQ T E+
Sbjct: 23 KTL-PWRNLQSQNCDESLKHIDRAYGVYISEIMLQQTQVKSVLERFYFPFLQK-FPTLES 80
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ A+E + + +YTR A N+KK A C+ K++ +P +++L L GIG A
Sbjct: 81 LANANEDELLKAWQGLGYYTR-ARNLKKAALECVDKFEAKLPKEVEDLKKLSGIGAYTAG 139
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+ G ++ + VD ++ R+ +RL + P K+ ++ +E L +
Sbjct: 140 AIACFG-YDQKVSFVDGNIRRVLSRLFALENPSMKELE---KRAKELLNLNHAFDH---- 191
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAF 212
N L+ G +C +CG+C + ++C F
Sbjct: 192 NQALLDIGALVCVSKNAKCGICPLYDFCQGKF 223
>UNIPROTKB|Q9KUR3 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 48 QRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDE 107
+R L+ T A+ A + + + +Y R A N+ K A++ +++Y G+ P+ L++
Sbjct: 51 ERFLER-FPTVHALAAAPQDEVLHFWTGLGYYAR-ARNLHKAAQMVVSEYGGEFPTDLEQ 108
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRL----GWVTQPGTKQKTSSPEQ 163
+ ALPG+G A V++ + I +D +V R R GW PG K S Q
Sbjct: 109 MNALPGVGRSTAAAVLSSVYKKPHAI-LDGNVKRTLARCFAVEGW---PGQK---SVENQ 161
Query: 164 TREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ PK + + N ++ G ICT +P+C +C V +C
Sbjct: 162 LWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVESFC 206
>TIGR_CMR|VC_0452 [details] [associations]
symbol:VC_0452 "A/G-specific adenine glycosylase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006281 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 OMA:FHLDIQP HSSP:P17802
PIR:D82320 RefSeq:NP_230106.1 ProteinModelPortal:Q9KUR3 SMR:Q9KUR3
DNASU:2615114 GeneID:2615114 KEGG:vch:VC0452 PATRIC:20079999
ProtClustDB:CLSK2391029 Uniprot:Q9KUR3
Length = 353
Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 48 QRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDE 107
+R L+ T A+ A + + + +Y R A N+ K A++ +++Y G+ P+ L++
Sbjct: 51 ERFLER-FPTVHALAAAPQDEVLHFWTGLGYYAR-ARNLHKAAQMVVSEYGGEFPTDLEQ 108
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRL----GWVTQPGTKQKTSSPEQ 163
+ ALPG+G A V++ + I +D +V R R GW PG K S Q
Sbjct: 109 MNALPGVGRSTAAAVLSSVYKKPHAI-LDGNVKRTLARCFAVEGW---PGQK---SVENQ 161
Query: 164 TREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ PK + + N ++ G ICT +P+C +C V +C
Sbjct: 162 LWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVESFC 206
>TIGR_CMR|SO_3368 [details] [associations]
symbol:SO_3368 "A/G-specific adenine glycosylase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155 SMART:SM00278
SMART:SM00478 SMART:SM00525 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004519
GO:GO:0019104 KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744
OMA:FHLDIQP HSSP:P17802 RefSeq:NP_718922.1
ProteinModelPortal:Q8EBX7 SMR:Q8EBX7 GeneID:1171048
KEGG:son:SO_3368 PATRIC:23526410 ProtClustDB:CLSK907131
Uniprot:Q8EBX7
Length = 365
Score = 164 (62.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/134 (32%), Positives = 67/134 (50%)
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
+ +Y R A N+ K AK+ +Y G P+ +++LALPGIG A V++L I +
Sbjct: 81 LGYYAR-ARNLHKAAKMIRDEYQGQFPTDFEQVLALPGIGRSTAGAVLSLSLGQHHPI-L 138
Query: 136 DTHVHRICNRLGWVTQ-PGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTP 194
D +V R+ R G + PG K Q E L P+++ + N ++ G +ICT
Sbjct: 139 DGNVKRVLARHGAIEGWPGQKPVEERLWQLTEQLT---PQQDIQKYNQAMMDIGASICTR 195
Query: 195 LRPRCGMCTVSEYC 208
+P C C V+ C
Sbjct: 196 SKPNCAACPVAVDC 209
>TIGR_CMR|CBU_0940 [details] [associations]
symbol:CBU_0940 "A/G-specific adenine glycosylase"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00278 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004519 GO:GO:0019104
KO:K03575 TIGRFAMs:TIGR01084 HOGENOM:HOG000028744 OMA:FHLDIQP
HSSP:P17802 RefSeq:NP_819952.1 ProteinModelPortal:Q83D07 SMR:Q83D07
GeneID:1208834 KEGG:cbu:CBU_0940 PATRIC:17930589
ProtClustDB:CLSK914429 BioCyc:CBUR227377:GJ7S-932-MONOMER
Uniprot:Q83D07
Length = 354
Score = 151 (58.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
+ +Y R A N+ + A+I Y G PS+++ L +LPGIG A V++LG + + +
Sbjct: 80 LGYYAR-ARNLHRAAQIIHVTYHGRFPSTVETLSSLPGIGRSTAGAVLSLG-MHQYAVIL 137
Query: 136 DTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPL 195
D +V R+ R + P +Q + + +++ PK N ++ G ICT
Sbjct: 138 DGNVKRVLARYNALDVPINQQVGINILWS--LAEKYTPKNRCWDYNQAMMDIGAMICTRT 195
Query: 196 RPRCGMCTVSEYC 208
+P+C +C + C
Sbjct: 196 KPKCSLCPLKSSC 208
>POMBASE|SPAC26A3.02 [details] [associations]
symbol:myh1 "adenine DNA glycosylase Myh1" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0000701 "purine-specific mismatch base pair DNA
N-glycosylase activity" evidence=IMP] [GO:0000702 "oxidized base
lesion DNA N-glycosylase activity" evidence=TAS] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC;IDA] [GO:0006281 "DNA repair"
evidence=IC] [GO:0006284 "base-excision repair" evidence=IC]
[GO:0019104 "DNA N-glycosylase activity" evidence=IDA] [GO:0034644
"cellular response to UV" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISM] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR004035 InterPro:IPR004036 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 Pfam:PF10576 PROSITE:PS00764
PROSITE:PS00893 PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478
SMART:SM00525 PomBase:SPAC26A3.02 GO:GO:0005634 GO:GO:0000077
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0034644 GO:GO:0004519 KO:K03575 eggNOG:COG1194
EMBL:AF053340 PIR:T38390 PIR:T43679 RefSeq:NP_594145.1
ProteinModelPortal:Q10159 IntAct:Q10159 MINT:MINT-1209697
STRING:Q10159 EnsemblFungi:SPAC26A3.02.1 GeneID:2542727
KEGG:spo:SPAC26A3.02 OMA:MVRAFKE OrthoDB:EOG4HDX3M NextBio:20803772
GO:GO:0000702 GO:GO:0000701 Uniprot:Q10159
Length = 461
Score = 151 (58.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 49/172 (28%), Positives = 79/172 (45%)
Query: 47 LQRLLQNGLHTAEAIDKADEATIKDLIYPV----AFYTRKACNMKKIAKIC--LTK-YDG 99
++R + T + EA + P+ FYTR C K++ + C L K +
Sbjct: 80 VKRYYTKWMETLPTLKSCAEAEYNTQVMPLWSGMGFYTR--C--KRLHQACQHLAKLHPS 135
Query: 100 DIPSSLDELL-ALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKT 158
+IP + DE +PG+GP A V+++ W GI VD +V R+ +R + +K K
Sbjct: 136 EIPRTGDEWAKGIPGVGPYTAGAVLSIAWKQPTGI-VDGNVIRVLSRALAIHSDCSKGKA 194
Query: 159 SSP--EQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
++ + E + P + N L+ G CTP PRC +C +SE C
Sbjct: 195 NALIWKLANELVDPVRPGD----FNQALMELGAITCTPQSPRCSVCPISEIC 242
>UNIPROTKB|J9P6R3 [details] [associations]
symbol:NTHL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR011257
GO:GO:0003824 Gene3D:1.10.340.30 SUPFAM:SSF48150 GO:GO:0006281
GeneTree:ENSGT00510000047513 EMBL:AAEX03004629
Ensembl:ENSCAFT00000049243 Uniprot:J9P6R3
Length = 240
Score = 146 (56.5 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ D S PPK +R+ V TKD+V GA+QRL +GL T ++I +
Sbjct: 93 PVDWLGVEHCHDPSAPPKVQRYQVLLSLMLSSQTKDQVTAGAMQRLRAHGL-TVDSILQT 151
Query: 65 DEATIKDLIYPVAFY 79
D+AT+ LIYPV F+
Sbjct: 152 DDATLGSLIYPVGFW 166
>TIGR_CMR|SPO_3448 [details] [associations]
symbol:SPO_3448 "A/G-specific adenine glycosylase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004844 "uracil DNA
N-glycosylase activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] InterPro:IPR000445
InterPro:IPR003265 InterPro:IPR003583 InterPro:IPR003651
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 PROSITE:PS01155
SMART:SM00278 SMART:SM00478 SMART:SM00525 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539
GO:GO:0005622 GO:GO:0004519 GO:GO:0019104 KO:K03575
HOGENOM:HOG000028743 TIGRFAMs:TIGR01084 RefSeq:YP_168644.1
ProteinModelPortal:Q5LMW4 GeneID:3195498 KEGG:sil:SPO3448
PATRIC:23380357 OMA:QAVKPYF ProtClustDB:CLSK934171 Uniprot:Q5LMW4
Length = 351
Score = 149 (57.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 46/153 (30%), Positives = 70/153 (45%)
Query: 57 TAEAIDKA-DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIG 115
T A+ A DEA + + + +Y R A N+ K A+ ++ G P S + L+ALPGIG
Sbjct: 72 TVAALAAAPDEAVMGEWA-GLGYYAR-ARNLLKCARAVSEEHGGQFPDSYEGLIALPGIG 129
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKE 175
P A + + + + + +D +V R+ RL V +P K E P +
Sbjct: 130 PYTAAAIAAIAFDRAETV-LDGNVERVMARLYDVQEPLPGVKPVLKEHAAALTPTARPGD 188
Query: 176 EWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ L G TICTP P CG+C + C
Sbjct: 189 HAQAVMDL----GATICTPRAPACGICPLRAPC 217
>TIGR_CMR|BA_0522 [details] [associations]
symbol:BA_0522 "A/G-specific adenine glycosylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR005760
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0005622 GO:GO:0004519
GO:GO:0019104 KO:K03575 HOGENOM:HOG000028743 TIGRFAMs:TIGR01084
HSSP:P17802 OMA:QAVKPYF RefSeq:NP_843058.1 RefSeq:YP_017141.1
RefSeq:YP_026771.1 ProteinModelPortal:Q81YV8 SMR:Q81YV8
DNASU:1087779 EnsemblBacteria:EBBACT00000010013
EnsemblBacteria:EBBACT00000017545 EnsemblBacteria:EBBACT00000019690
GeneID:1087779 GeneID:2817839 GeneID:2853132 KEGG:ban:BA_0522
KEGG:bar:GBAA_0522 KEGG:bat:BAS0491 ProtClustDB:CLSK886914
BioCyc:BANT260799:GJAJ-534-MONOMER
BioCyc:BANT261594:GJ7F-559-MONOMER Uniprot:Q81YV8
Length = 365
Score = 145 (56.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGP 116
T EA+ AD+ + + +Y+R A N+ K Y G +PS + ++ L G+GP
Sbjct: 68 TLEALANADDEEVLKAWEGLGYYSR-ARNLHAAVKEVKEVYGGIVPSDVKKIEKLKGVGP 126
Query: 117 KMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEE 176
++++ + + VD +V R+ +R+ V K KT + E ++ + E
Sbjct: 127 YTKGAILSIA-YGIPEPAVDGNVVRVLSRILSVWDDIAKPKTRKVFE--EIVREIISAEN 183
Query: 177 WVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N L+ G IC P P C +C V E+C
Sbjct: 184 PSYFNQGLMELGALICIPKNPACLLCPVREHC 215
>UNIPROTKB|P17802 [details] [associations]
symbol:mutY "adenine glycosylase; G.C --> T.A
transversions" species:83333 "Escherichia coli K-12" [GO:0019104
"DNA N-glycosylase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016798 "hydrolase activity, acting on
glycosyl bonds" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA;IDA] [GO:0006284 "base-excision repair"
evidence=IEA;IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00633 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00278 SMART:SM00478
SMART:SM00525 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 Gene3D:3.90.79.10 SUPFAM:SSF55811
GO:GO:0051539 GO:GO:0005622 GO:GO:0016787 DrugBank:DB00173
EMBL:U28377 GO:GO:0004519 GO:GO:0019104 KO:K03575 eggNOG:COG1194
TIGRFAMs:TIGR01084 EMBL:X52391 EMBL:M59471 PIR:B38535
RefSeq:NP_417436.1 RefSeq:YP_491160.1 PDB:1KG2 PDB:1KG3 PDB:1KG4
PDB:1KG5 PDB:1KG6 PDB:1KG7 PDB:1KQJ PDB:1MUD PDB:1MUN PDB:1MUY
PDB:1WEF PDB:1WEG PDB:1WEI PDBsum:1KG2 PDBsum:1KG3 PDBsum:1KG4
PDBsum:1KG5 PDBsum:1KG6 PDBsum:1KG7 PDBsum:1KQJ PDBsum:1MUD
PDBsum:1MUN PDBsum:1MUY PDBsum:1WEF PDBsum:1WEG PDBsum:1WEI
ProteinModelPortal:P17802 SMR:P17802 DIP:DIP-10289N IntAct:P17802
MINT:MINT-1240449 PRIDE:P17802 EnsemblBacteria:EBESCT00000003975
EnsemblBacteria:EBESCT00000004732 EnsemblBacteria:EBESCT00000004734
EnsemblBacteria:EBESCT00000004736 EnsemblBacteria:EBESCT00000018160
EnsemblBacteria:EBESCT00000232596 EnsemblBacteria:EBESCT00000232600
GeneID:12933365 GeneID:947447 KEGG:ecj:Y75_p2891 KEGG:eco:b2961
PATRIC:32121336 EchoBASE:EB0622 EcoGene:EG10627
HOGENOM:HOG000028744 OMA:FHLDIQP ProtClustDB:PRK10880
BioCyc:EcoCyc:EG10627-MONOMER BioCyc:ECOL316407:JW2928-MONOMER
EvolutionaryTrace:P17802 Genevestigator:P17802 Uniprot:P17802
Length = 350
Score = 137 (53.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/140 (28%), Positives = 66/140 (47%)
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
+ +Y R A N+ K A+ T + G P + +E+ ALPG+G A +++L I +
Sbjct: 80 LGYYAR-ARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPI-L 137
Query: 136 DTHVHRICNRL----GWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
D +V R+ R GW PG K+ + E + + E R N ++ G I
Sbjct: 138 DGNVKRVLARCYAVSGW---PGKKEVENKLWSLSEQVTPAVGVE---RFNQAMMDLGAMI 191
Query: 192 CTPLRPRCGMCTVSEYCPSA 211
CT +P+C +C + C +A
Sbjct: 192 CTRSKPKCSLCPLQNGCIAA 211
>GENEDB_PFALCIPARUM|PF11_0306 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine
glycosylase, putative" species:5833 "Plasmodium falciparum"
[GO:0000703 "oxidized pyrimidine nucleobase lesion DNA
N-glycosylase activity" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR003265 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703
KO:K03575 RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
Y +A N+ + KI + KY+G P+ L L LPGIG + + + +N + IC+DT+
Sbjct: 263 YYNRAKNLLECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAIC-IHLYNRKDICIDTN 321
Query: 139 VHRICNRL-GWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
+ RI +R+ + + E+ E L + + ++ + G ++C P
Sbjct: 322 IIRIFSRITDTINYYNSGTLLKHCEKVSEILCSG--ESNYSDLSQAFMDLGSSVCNN-SP 378
Query: 198 RCGMCTVSEYC 208
C C +++YC
Sbjct: 379 DCSQCPINKYC 389
>UNIPROTKB|Q8II68 [details] [associations]
symbol:PF11_0306 "A/G-specific adenine glycosylase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000703
"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity"
evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR003265 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 SMART:SM00478 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 EMBL:AE014186 GO:GO:0000703 KO:K03575
RefSeq:XP_001347977.2 ProteinModelPortal:Q8II68
EnsemblProtists:PF11_0306:mRNA GeneID:810853 KEGG:pfa:PF11_0306
EuPathDB:PlasmoDB:PF3D7_1129500 HOGENOM:HOG000282401
ProtClustDB:CLSZ2446653 Uniprot:Q8II68
Length = 613
Score = 135 (52.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
Y +A N+ + KI + KY+G P+ L L LPGIG + + + +N + IC+DT+
Sbjct: 263 YYNRAKNLLECCKIVVDKYNGIFPNDLKLLKTLPGIGDYTSKAIC-IHLYNRKDICIDTN 321
Query: 139 VHRICNRL-GWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
+ RI +R+ + + E+ E L + + ++ + G ++C P
Sbjct: 322 IIRIFSRITDTINYYNSGTLLKHCEKVSEILCSG--ESNYSDLSQAFMDLGSSVCNN-SP 378
Query: 198 RCGMCTVSEYC 208
C C +++YC
Sbjct: 379 DCSQCPINKYC 389
>UNIPROTKB|Q3Z642 [details] [associations]
symbol:DET1612 "DNA repair protein, HhH-GPD family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003265
InterPro:IPR003583 InterPro:IPR005759 InterPro:IPR011257
Pfam:PF00730 PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478
GO:GO:0003824 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:CP000027
GenomeReviews:CP000027_GR RefSeq:YP_182307.1
ProteinModelPortal:Q3Z642 STRING:Q3Z642 GeneID:3229065
KEGG:det:DET1612 PATRIC:21610236 eggNOG:COG2231
HOGENOM:HOG000252207 KO:K07457 OMA:YNEYHAL ProtClustDB:CLSK836787
BioCyc:DETH243164:GJNF-1613-MONOMER Uniprot:Q3Z642
Length = 220
Score = 122 (48.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 21 PKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E RF + + A+ RL + GL + EAI K DE T+ + I P ++
Sbjct: 28 PAESRFEMMTGAVLTQSAAWTNVEKAIARLKEAGLLSPEAIMKTDEDTLAEAIRPSGYFN 87
Query: 81 RKACNMKKIAKICLTKYDGD----IPSSLD----ELLALPGIGPKMANMVMTLGWFNVQG 132
K +K +A + Y+G +P+ D ELL + GIG + A+ ++
Sbjct: 88 VKTRKLKALAAWLVAGYNGQADKLLPAETDALRQELLGVWGIGEETADSILLYACGKPVF 147
Query: 133 ICVDTHVHRICNRLG 147
+ +D + RI +RLG
Sbjct: 148 V-IDAYTRRIFSRLG 161
>TIGR_CMR|DET_1612 [details] [associations]
symbol:DET_1612 "DNA repair protein, HhH-GPD family"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0006281 "DNA repair"
evidence=ISS] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00730
PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478 GO:GO:0003824
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 EMBL:CP000027
GenomeReviews:CP000027_GR RefSeq:YP_182307.1
ProteinModelPortal:Q3Z642 STRING:Q3Z642 GeneID:3229065
KEGG:det:DET1612 PATRIC:21610236 eggNOG:COG2231
HOGENOM:HOG000252207 KO:K07457 OMA:YNEYHAL ProtClustDB:CLSK836787
BioCyc:DETH243164:GJNF-1613-MONOMER Uniprot:Q3Z642
Length = 220
Score = 122 (48.0 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 38/135 (28%), Positives = 62/135 (45%)
Query: 21 PKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E RF + + A+ RL + GL + EAI K DE T+ + I P ++
Sbjct: 28 PAESRFEMMTGAVLTQSAAWTNVEKAIARLKEAGLLSPEAIMKTDEDTLAEAIRPSGYFN 87
Query: 81 RKACNMKKIAKICLTKYDGD----IPSSLD----ELLALPGIGPKMANMVMTLGWFNVQG 132
K +K +A + Y+G +P+ D ELL + GIG + A+ ++
Sbjct: 88 VKTRKLKALAAWLVAGYNGQADKLLPAETDALRQELLGVWGIGEETADSILLYACGKPVF 147
Query: 133 ICVDTHVHRICNRLG 147
+ +D + RI +RLG
Sbjct: 148 V-IDAYTRRIFSRLG 161
>UNIPROTKB|O53574 [details] [associations]
symbol:mutY "PROBABLE ADENINE GLYCOSYLASE MUTY"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR000445 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00633 Pfam:PF00730
SMART:SM00478 SMART:SM00525 GO:GO:0005886 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:BX842583 GO:GO:0051539
GO:GO:0004519 GO:GO:0016798 KO:K03575 EMBL:AL123456 PIR:F70804
RefSeq:NP_218106.1 RefSeq:NP_338239.1 RefSeq:YP_006517079.1
HSSP:P17802 SMR:O53574 EnsemblBacteria:EBMYCT00000003804
EnsemblBacteria:EBMYCT00000070555 GeneID:13317198 GeneID:886639
GeneID:926528 KEGG:mtc:MT3695 KEGG:mtu:Rv3589 KEGG:mtv:RVBD_3589
PATRIC:18129879 TubercuList:Rv3589 HOGENOM:HOG000028742 OMA:IMLQQTP
ProtClustDB:CLSK792583 Uniprot:O53574
Length = 304
Score = 125 (49.1 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
Y R+A + + A + ++ +P ++ L+ LPG+G A V + + VDT+
Sbjct: 93 YPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPV-VDTN 151
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV-RINPLLVGFGQTICTPLRP 197
V R+ R V S P + L LP E + L+ G T+CT P
Sbjct: 152 VRRVVARA--VHGRADAGAPSVPRDHADVLAL-LPHRETAPEFSVALMELGATVCTARTP 208
Query: 198 RCGMCTVSEYC 208
RCG+C + ++C
Sbjct: 209 RCGLCPL-DWC 218
>DICTYBASE|DDB_G0270764 [details] [associations]
symbol:myh "monofunctional DNA glycosylase"
species:44689 "Dictyostelium discoideum" [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 SMART:SM00478 SMART:SM00525
dictyBase:DDB_G0270764 GO:GO:0005634 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 Gene3D:1.10.1670.10 InterPro:IPR023170
Gene3D:3.90.79.10 SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0006298
GO:GO:0004519 KO:K03575 eggNOG:COG1194 RefSeq:XP_001134477.1
ProteinModelPortal:Q1ZXP7 STRING:Q1ZXP7 EnsemblProtists:DDB0232996
GeneID:8617615 KEGG:ddi:DDB_G0270764 InParanoid:Q1ZXP7 OMA:RSIGANP
ProtClustDB:CLSZ2847450 Uniprot:Q1ZXP7
Length = 574
Score = 127 (49.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/132 (30%), Positives = 60/132 (45%)
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
Y R+A N+ +K + ++ IPS + LL + GIGP A + ++ FN VD +
Sbjct: 181 YYRRAKNLWLGSKYVVDNFNSKIPSDVKSLLEINGIGPYTAGAISSIA-FNKPVPLVDGN 239
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK--EEWVRINPLLVGFGQTICTPLR 196
V R+ +R V G K SS + L L + E N L+ G TIC+
Sbjct: 240 VIRVLSR---VRSIGANPKLSSTVKLFWELGNDLVESVENPCNFNQSLMELGATICSVQS 296
Query: 197 PRCGMCTVSEYC 208
P+C C + C
Sbjct: 297 PQCKQCPIQSNC 308
>UNIPROTKB|F1P514 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00821549
Ensembl:ENSGALT00000038451 Uniprot:F1P514
Length = 398
Score = 120 (47.3 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL-PGIG 115
T +A+ A + +L + +Y+R +++ A+ +++ G +P + ++L L PG+G
Sbjct: 74 TLQALAAASLEEVNELWAGLGYYSRGK-RLQEAARKVVSELAGRMPRTAEDLQRLLPGVG 132
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSP--EQTREALQRWLP 173
A + ++ + G+ VD +V R+ RL + + + + R P
Sbjct: 133 RYTAGAIASISFGQATGV-VDGNVIRVLCRLRCIGADTSSLAVIDCLWDMANTLVDRSRP 191
Query: 174 KEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ N L+ G T+CTP P C C V E+C
Sbjct: 192 GD----FNQALMELGATVCTPKSPLCRECPVKEHC 222
>UNIPROTKB|E1BZT8 [details] [associations]
symbol:MUTYH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032407
"MutSalpha complex binding" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764
PROSITE:PS01155 SMART:SM00478 SMART:SM00525 GO:GO:0005739
GO:GO:0005634 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519
GeneTree:ENSGT00510000047220 EMBL:AADN02012669 IPI:IPI00595820
ProteinModelPortal:E1BZT8 Ensembl:ENSGALT00000016624 Uniprot:E1BZT8
Length = 461
Score = 120 (47.3 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL-PGIG 115
T +A+ A + +L + +Y+R +++ A+ +++ G +P + ++L L PG+G
Sbjct: 120 TLQALAAASLEEVNELWAGLGYYSRGK-RLQEAARKVVSELAGRMPRTAEDLQRLLPGVG 178
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSP--EQTREALQRWLP 173
A + ++ + G+ VD +V R+ RL + + + + R P
Sbjct: 179 RYTAGAIASISFGQATGV-VDGNVIRVLCRLRCIGADTSSLAVIDCLWDMANTLVDRSRP 237
Query: 174 KEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ N L+ G T+CTP P C C V E+C
Sbjct: 238 GD----FNQALMELGATVCTPKSPLCRECPVKEHC 268
>UNIPROTKB|Q746Z0 [details] [associations]
symbol:nth "Endonuclease III-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00730
PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0004519 HOGENOM:HOG000252207
KO:K07457 RefSeq:NP_954417.2 GeneID:2686887 KEGG:gsu:GSU3377
PATRIC:22029609 ProtClustDB:CLSK829256
BioCyc:GSUL243231:GH27-3336-MONOMER Uniprot:Q746Z0
Length = 214
Score = 108 (43.1 bits), Expect = 0.00033, P = 0.00033
Identities = 47/198 (23%), Positives = 76/198 (38%)
Query: 21 PKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + F V T + A+ RL GL + E + A + + I P +Y
Sbjct: 23 PADTPFEVCVGAILTQNTNWGNVEKAIVRLKAAGLLSPEGLRDVPVAELAETIRPAGYYN 82
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLD--------ELLALPGIGPKMANMVMTLGWFNVQG 132
K+ +K ++ G + ELL + GIG + A+ ++
Sbjct: 83 VKSARLKDFVGFLFGRFGGSLERMFAGEWRELRRELLGVRGIGRETADSILLYAG-GKPS 141
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV--RINPLLVGFGQT 190
VD + R+ + LG V P T +T R LP++ + + L+V +
Sbjct: 142 FVVDAYTKRLFSALGLVA-PTTDYET-----VRALFMDNLPEDTTLFNEYHALIVEHCKR 195
Query: 191 ICTPLRPRCGMCTVSEYC 208
CT RPRCG C + C
Sbjct: 196 HCTT-RPRCGECGLHLLC 212
>TIGR_CMR|GSU_3377 [details] [associations]
symbol:GSU_3377 "helix-hairpin-helix domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003265 InterPro:IPR003583
InterPro:IPR005759 InterPro:IPR011257 Pfam:PF00730
PIRSF:PIRSF001435 SMART:SM00278 SMART:SM00478 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0004519 HOGENOM:HOG000252207
KO:K07457 RefSeq:NP_954417.2 GeneID:2686887 KEGG:gsu:GSU3377
PATRIC:22029609 ProtClustDB:CLSK829256
BioCyc:GSUL243231:GH27-3336-MONOMER Uniprot:Q746Z0
Length = 214
Score = 108 (43.1 bits), Expect = 0.00033, P = 0.00033
Identities = 47/198 (23%), Positives = 76/198 (38%)
Query: 21 PKERRFAVXXXXXXXXXTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + F V T + A+ RL GL + E + A + + I P +Y
Sbjct: 23 PADTPFEVCVGAILTQNTNWGNVEKAIVRLKAAGLLSPEGLRDVPVAELAETIRPAGYYN 82
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLD--------ELLALPGIGPKMANMVMTLGWFNVQG 132
K+ +K ++ G + ELL + GIG + A+ ++
Sbjct: 83 VKSARLKDFVGFLFGRFGGSLERMFAGEWRELRRELLGVRGIGRETADSILLYAG-GKPS 141
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV--RINPLLVGFGQT 190
VD + R+ + LG V P T +T R LP++ + + L+V +
Sbjct: 142 FVVDAYTKRLFSALGLVA-PTTDYET-----VRALFMDNLPEDTTLFNEYHALIVEHCKR 195
Query: 191 ICTPLRPRCGMCTVSEYC 208
CT RPRCG C + C
Sbjct: 196 HCTT-RPRCGECGLHLLC 212
>UNIPROTKB|Q5T413 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS01155
SMART:SM00478 SMART:SM00525 GO:GO:0005739 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519 EMBL:AL359540
UniGene:Hs.271353 HGNC:HGNC:7527 HOVERGEN:HBG052540
HOGENOM:HOG000028743 IPI:IPI00975588 SMR:Q5T413 STRING:Q5T413
Ensembl:ENST00000435155 Uniprot:Q5T413
Length = 291
Score = 110 (43.8 bits), Expect = 0.00041, P = 0.00041
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL-PGIG 115
T + + A + L + +Y+R +++ A+ + + G +P + + L L PG+G
Sbjct: 141 TLQDLASASLEEVNQLWAGLGYYSRGR-RLQEGARKVVEELGGHMPRTAETLQQLLPGVG 199
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV-TQPGTKQKTSSPEQTREALQRWLPK 174
A + ++ + G+ VD +V R+ R+ + P + T +Q Q+ +
Sbjct: 200 RYTAGAIASIAFGQATGV-VDGNVARVLCRVRAIGADPSS---TLVSQQLWGLAQQLVDP 255
Query: 175 EEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N + G T+CTP RP C C V C
Sbjct: 256 ARPGDFNQAAMELGATVCTPQRPLCSQCPVESLC 289
>UNIPROTKB|Q5T418 [details] [associations]
symbol:MUTYH "A/G-specific adenine DNA glycosylase"
species:9606 "Homo sapiens" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR011257 Pfam:PF00730 Pfam:PF10576
PROSITE:PS00764 PROSITE:PS01155 SMART:SM00478 SMART:SM00525
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0051539 GO:GO:0004519
EMBL:AL359540 UniGene:Hs.271353 HGNC:HGNC:7527 HOGENOM:HOG000028743
IPI:IPI00647822 SMR:Q5T418 MINT:MINT-1380954 STRING:Q5T418
Ensembl:ENST00000412971 Uniprot:Q5T418
Length = 215
Score = 107 (42.7 bits), Expect = 0.00044, P = 0.00044
Identities = 33/135 (24%), Positives = 61/135 (45%)
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL-PGIGPKMANMVMTLGWFNVQGIC 134
+ +Y+R +++ A+ + + G +P + + L L PG+G A + ++ + G+
Sbjct: 21 LGYYSRGR-RLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGV- 78
Query: 135 VDTHVHRICNRLGWV-TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD +V R+ R+ + P + T +Q Q+ + N + G T+CT
Sbjct: 79 VDGNVARVLCRVRAIGADPSS---TLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCT 135
Query: 194 PLRPRCGMCTVSEYC 208
P RP C C V C
Sbjct: 136 PQRPLCSQCPVESLC 150
>RGD|620045 [details] [associations]
symbol:Mutyh "mutY homolog (E. coli)" species:10116 "Rattus
norvegicus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005739
"mitochondrion" evidence=IEA;ISO;IDA] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IDA] [GO:0019104 "DNA N-glycosylase activity"
evidence=IEA;IDA] [GO:0032407 "MutSalpha complex binding"
evidence=IEA;ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0032405 "MutLalpha complex binding" evidence=ISO] [GO:0032406
"MutLbeta complex binding" evidence=ISO] [GO:0032408 "MutSbeta
complex binding" evidence=ISO] InterPro:IPR000086
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR004035
InterPro:IPR004036 InterPro:IPR005760 InterPro:IPR011257
InterPro:IPR015797 Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893
PROSITE:PS01155 PROSITE:PS51462 SMART:SM00478 SMART:SM00525
RGD:620045 GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 113 (44.8 bits), Expect = 0.00047, P = 0.00047
Identities = 36/153 (23%), Positives = 66/153 (43%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL-PGIG 115
T + + A + L + +Y+R +++ A+ + + G +P + + L L PG+G
Sbjct: 129 TLQDLASASLEEVNQLWSGLGYYSRGR-RLQEGARKVVEELGGHVPRTAETLQQLLPGVG 187
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKE 175
A + ++ + V G+ VD +V R+ R+ + T S + Q+ +
Sbjct: 188 RYTAGAIASIAFDQVTGV-VDGNVIRVLCRVRAIGADPTSSFVS--HHLWDLAQQLVDPA 244
Query: 176 EWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N + G T+CTP RP C C V C
Sbjct: 245 RPGDFNQAAMELGATVCTPQRPLCNHCPVQSLC 277
>UNIPROTKB|Q8R5G2 [details] [associations]
symbol:Mutyh "A/G-specific adenine DNA glycosylase"
species:10116 "Rattus norvegicus" [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] InterPro:IPR000086 InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR004035 InterPro:IPR004036
InterPro:IPR005760 InterPro:IPR011257 InterPro:IPR015797
Pfam:PF00730 PROSITE:PS00764 PROSITE:PS00893 PROSITE:PS01155
PROSITE:PS51462 SMART:SM00478 SMART:SM00525 RGD:620045
GO:GO:0005739 GO:GO:0005634 GO:GO:0006979 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 Gene3D:3.90.79.10
SUPFAM:SSF55811 GO:GO:0051539 GO:GO:0004519 GO:GO:0019104 KO:K03575
CTD:4595 eggNOG:COG1194 HOVERGEN:HBG052540 OrthoDB:EOG4HX50Q
HOGENOM:HOG000028743 EMBL:AF478683 IPI:IPI00201702
RefSeq:NP_579850.1 UniGene:Rn.44045 ProteinModelPortal:Q8R5G2
STRING:Q8R5G2 PhosphoSite:Q8R5G2 PRIDE:Q8R5G2 GeneID:170841
KEGG:rno:170841 UCSC:RGD:620045 InParanoid:Q8R5G2 NextBio:621257
Genevestigator:Q8R5G2 GermOnline:ENSRNOG00000017887
TIGRFAMs:TIGR01084 Uniprot:Q8R5G2
Length = 516
Score = 113 (44.8 bits), Expect = 0.00047, P = 0.00047
Identities = 36/153 (23%), Positives = 66/153 (43%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL-PGIG 115
T + + A + L + +Y+R +++ A+ + + G +P + + L L PG+G
Sbjct: 129 TLQDLASASLEEVNQLWSGLGYYSRGR-RLQEGARKVVEELGGHVPRTAETLQQLLPGVG 187
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKE 175
A + ++ + V G+ VD +V R+ R+ + T S + Q+ +
Sbjct: 188 RYTAGAIASIAFDQVTGV-VDGNVIRVLCRVRAIGADPTSSFVS--HHLWDLAQQLVDPA 244
Query: 176 EWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N + G T+CTP RP C C V C
Sbjct: 245 RPGDFNQAAMELGATVCTPQRPLCNHCPVQSLC 277
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 235 209 0.00079 112 3 11 22 0.49 32
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 610 (65 KB)
Total size of DFA: 183 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.43u 0.08s 18.51t Elapsed: 00:00:01
Total cpu time: 18.44u 0.08s 18.52t Elapsed: 00:00:01
Start: Sat May 11 01:39:55 2013 End: Sat May 11 01:39:56 2013