BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026682
(235 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224115286|ref|XP_002332207.1| predicted protein [Populus trichocarpa]
gi|222875314|gb|EEF12445.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/212 (72%), Positives = 185/212 (87%), Gaps = 1/212 (0%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE SEDG E+LFDHGAPFF+ +N+DVL LV EWES GLV EWK N GSFD +SKKF
Sbjct: 44 MSQRREISEDGKELLFDHGAPFFSASNSDVLRLVHEWESKGLVEEWKENCGSFDCISKKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++I+Q+ NKKYVG+PGMNSICKALC++ GVESKFGV +GR E L+D+ WS++GLDGQ+
Sbjct: 104 LDIEQEAPNKKYVGIPGMNSICKALCNETGVESKFGVSIGRLECLDDEK-WSLTGLDGQN 162
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVV SDK + SPRF DVTGRPPPLDL+ P+LA+KL++IPV+PCFALMLAFSEPL
Sbjct: 163 LGRFSGVVVSDKGIASPRFTDVTGRPPPLDLSLTPELALKLQDIPVSPCFALMLAFSEPL 222
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANR 212
SSI VKGFSF++SE+LSW+HCDSSKPGRS R
Sbjct: 223 SSISVKGFSFKNSEILSWSHCDSSKPGRSTAR 254
>gi|147778135|emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]
Length = 369
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 178/211 (84%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS R+E +EDG E++FDHGAP FTV+N DVL +VREWE+ GLVAEWK N SFD +S+KF
Sbjct: 44 MSYRKEITEDGKELVFDHGAPLFTVSNPDVLGIVREWEARGLVAEWKENFASFDCISRKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++ +++G++KKYVGVP MNSIC+ALCH+PGVESKFGVGVG EW ++KNLWS++GLDGQ+
Sbjct: 104 IDFEKEGLSKKYVGVPVMNSICRALCHEPGVESKFGVGVGSLEWFDEKNLWSLTGLDGQN 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F GVVASDKN+ S RF DVTGRPPPLDL P+LA KL+E+PV CF LMLAF++PL
Sbjct: 164 LGNFEGVVASDKNIFSKRFTDVTGRPPPLDLNLIPELAAKLQEVPVCSCFVLMLAFTKPL 223
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSI VKGFSF++SE+LSWA CDSSKPG A
Sbjct: 224 SSISVKGFSFKNSEILSWAFCDSSKPGHPAT 254
>gi|225462207|ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264528 [Vitis vinifera]
gi|296082792|emb|CBI21797.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 178/211 (84%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS R+E +EDG E++FDHGAP FTV+N DVL +VREWE+ GLVAEWK N SFD +S+KF
Sbjct: 44 MSYRKEITEDGKELVFDHGAPLFTVSNPDVLGIVREWEARGLVAEWKENFASFDCISRKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++ +++G+++KYVGVP MNSIC+ALCH+PGVESKFGVGVG EW ++KNLWS++GLDGQ+
Sbjct: 104 IDFEKEGLSEKYVGVPVMNSICRALCHEPGVESKFGVGVGSLEWFDEKNLWSLTGLDGQN 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F GVVASDKN+ S RF DVTGRPPPLDL P+LA KL+E+PV CF LMLAF++PL
Sbjct: 164 LGNFEGVVASDKNIFSKRFTDVTGRPPPLDLNLIPELAAKLQEVPVCSCFVLMLAFTKPL 223
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSI VKGFSF++SE+LSWA CDSSKPG A
Sbjct: 224 SSISVKGFSFKNSEILSWAFCDSSKPGHPAT 254
>gi|356525815|ref|XP_003531517.1| PREDICTED: uncharacterized protein LOC100816696 [Glycine max]
Length = 369
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 175/211 (82%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAPFF+V+ ++VL LV+EWES GLVAEWK SFD + KF
Sbjct: 44 MSQRRERTEDGTELHFDHGAPFFSVSKSEVLHLVQEWESRGLVAEWKEKFASFDFHTLKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
NI+Q+G +K+YVGVPGMNSICKALC++ GVESKFGVG+GR EWL D+ LWS+ G+DGQ+
Sbjct: 104 NNIEQEGSSKRYVGVPGMNSICKALCNESGVESKFGVGIGRIEWLHDEKLWSLIGVDGQN 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LGQF G+VASDKN+VSPR +VTGR PPLD+ P+L+ KL ++PV PCF +MLAF+EPL
Sbjct: 164 LGQFKGLVASDKNIVSPRVAEVTGRTPPLDIKLVPELSEKLLDLPVKPCFIVMLAFAEPL 223
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
S++PVK FSF++SEVLS A+CDSSKP RS
Sbjct: 224 STVPVKAFSFENSEVLSQAYCDSSKPNRSTT 254
>gi|449460040|ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216187 [Cucumis sativus]
Length = 369
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 169/209 (80%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAP+FTV + +VL+LVREWES + AEWK FD S +F
Sbjct: 44 MSQRREIAEDGRELHFDHGAPYFTVNSPEVLSLVREWESKKICAEWKEGFDIFDCFSNQF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +Q+ ++ +YVG PGMNSICKALCH+PGVESKFGV VGR EWLE N W + G+DGQS
Sbjct: 104 TSTEQERVSGRYVGTPGMNSICKALCHEPGVESKFGVSVGRMEWLEKDNSWLLLGIDGQS 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LGQF G+VASDKN+VSPRF VTGR PPLDL+ PDLA+KL+ IPV PCFALMLAF +PL
Sbjct: 164 LGQFEGIVASDKNIVSPRFTSVTGRVPPLDLSLVPDLAIKLQNIPVIPCFALMLAFEQPL 223
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
S IPVKGF ++SEVLSWA+CDSSKPGRS
Sbjct: 224 SMIPVKGFFIKNSEVLSWAYCDSSKPGRS 252
>gi|449502153|ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224633 [Cucumis sativus]
Length = 369
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 169/209 (80%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAP+FTV + +VL+LVREWES + AEWK FD S +F
Sbjct: 44 MSQRREIAEDGRELHFDHGAPYFTVNSPEVLSLVREWESKKICAEWKEGFDIFDCFSNQF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +Q+ ++ +YVG PGMNSICKALCH+PGVESKFGV VGR EWLE N W + G+DGQS
Sbjct: 104 TSTEQERVSGRYVGTPGMNSICKALCHEPGVESKFGVSVGRMEWLEKDNSWLLLGIDGQS 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LGQF G+VASDKN+VSPRF VTGR PPLDL+ PDLA+KL+ IPV PCFALMLAF +PL
Sbjct: 164 LGQFEGIVASDKNIVSPRFTSVTGRVPPLDLSLVPDLAIKLQNIPVIPCFALMLAFEQPL 223
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
S IPVKGF ++SEVLSWA+CDSSKPGRS
Sbjct: 224 SMIPVKGFFIKNSEVLSWAYCDSSKPGRS 252
>gi|186491294|ref|NP_175994.2| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|332195206|gb|AEE33327.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 466
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 171/211 (81%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 197 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 256
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 257 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 316
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 317 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 376
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSIPVKG SF++SE+LSWAHC+S+KPGRS +
Sbjct: 377 SSIPVKGLSFKNSEILSWAHCESTKPGRSTD 407
>gi|6056386|gb|AAF02850.1|AC009894_21 Hypothetical protein [Arabidopsis thaliana]
Length = 418
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 171/211 (81%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 149 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 208
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 209 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 268
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 269 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 328
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSIPVKG SF++SE+LSWAHC+S+KPGRS +
Sbjct: 329 SSIPVKGLSFKNSEILSWAHCESTKPGRSTD 359
>gi|6056384|gb|AAF02848.1|AC009894_19 Hypothetical protein [Arabidopsis thaliana]
Length = 396
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 171/211 (81%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 71 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 130
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 131 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 190
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 191 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 250
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSIPVKG SF++SE+LSWAHC+S+KPGRS +
Sbjct: 251 SSIPVKGLSFKNSEILSWAHCESTKPGRSTD 281
>gi|22330276|ref|NP_175996.2| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|17978976|gb|AAL47449.1| T6H22.19/T6H22.19 [Arabidopsis thaliana]
gi|22655396|gb|AAM98290.1| At1g55980/T6H22.19 [Arabidopsis thaliana]
gi|222423033|dbj|BAH19499.1| AT1G56000 [Arabidopsis thaliana]
gi|332195208|gb|AEE33329.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 384
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 171/211 (81%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 59 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 118
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 119 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 178
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 179 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 238
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSIPVKG SF++SE+LSWAHC+S+KPGRS +
Sbjct: 239 SSIPVKGLSFKNSEILSWAHCESTKPGRSTD 269
>gi|297847978|ref|XP_002891870.1| hypothetical protein ARALYDRAFT_474667 [Arabidopsis lyrata subsp.
lyrata]
gi|297337712|gb|EFH68129.1| hypothetical protein ARALYDRAFT_474667 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 167/211 (79%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V N+D +ALV EWES G V+EWK GSFD KF
Sbjct: 59 MSQRREIGEDGKELMFDHGAPFFCVGNSDAMALVHEWESRGFVSEWKQVFGSFDCAFNKF 118
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALCH+ GV++ FG G+ + EWLE++ W ++ G +
Sbjct: 119 LGIQQEGDAKKYVGVPGMNSISKALCHESGVKTMFGTGIAKLEWLEEEIPWLLTDSKGDN 178
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F GVVASDKN+VSPRF VTG PPPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 179 LGRFYGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 238
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSIPVKG SF++SE+LSWAHCDS+KPGRS +
Sbjct: 239 SSIPVKGLSFKNSEILSWAHCDSTKPGRSTD 269
>gi|297847968|ref|XP_002891865.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337707|gb|EFH68124.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 400
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 168/211 (79%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V N+D +ALV EWES G V+EWK SFD S KF
Sbjct: 75 MSQRREIGEDGKELMFDHGAPFFCVGNSDAMALVHEWESRGFVSEWKQVFRSFDYASNKF 134
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 135 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKLEWLEEEIPWLLTDSKGEN 194
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG+F+GVVASDKN+VSPRF VTG PPLDL+ P+LA KL+ IPV PCF+LMLAF EPL
Sbjct: 195 LGRFDGVVASDKNIVSPRFTQVTGLSPPLDLSLVPELATKLQNIPVPPCFSLMLAFKEPL 254
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
SSIPVKG SF++SE+LSWAHCDS+KPGRS +
Sbjct: 255 SSIPVKGLSFKNSEILSWAHCDSTKPGRSTD 285
>gi|8778321|gb|AAF79330.1|AC002304_23 F14J16.28 [Arabidopsis thaliana]
Length = 499
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 171/242 (70%), Gaps = 31/242 (12%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 199 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 258
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 259 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 318
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPL------------------------------- 149
LG+F+GVVASDKN+VSPRF VTG PPPL
Sbjct: 319 LGRFDGVVASDKNIVSPRFTQVTGLPPPLGKTCTNSVLLQLLFQCYITFISIHFYLLSYT 378
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
DL+ P+LA KL+ IPV PCF+LMLAF EPLSSIPVKG SF++SE+LSWAHC+S+KPGRS
Sbjct: 379 DLSLVPELATKLQNIPVLPCFSLMLAFKEPLSSIPVKGLSFKNSEILSWAHCESTKPGRS 438
Query: 210 AN 211
+
Sbjct: 439 TD 440
>gi|8778316|gb|AAF79325.1|AC002304_18 F14J16.31 [Arabidopsis thaliana]
Length = 444
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/244 (56%), Positives = 172/244 (70%), Gaps = 31/244 (12%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK GSFD S KF
Sbjct: 78 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 137
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ IQQ+G KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++ W ++ G++
Sbjct: 138 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 197
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPL------------------------------- 149
LG+F+GVVASDKN+VSPRF VTG PPPL
Sbjct: 198 LGRFDGVVASDKNIVSPRFTQVTGLPPPLGKTCTNSVLLQLLFQCYITFISIHFYLLSYT 257
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
DL+ P+LA KL+ IPV PCF+LMLAF EPLSSIPVKG SF++SE+LSWAHC+S+KPGRS
Sbjct: 258 DLSLVPELATKLQNIPVLPCFSLMLAFKEPLSSIPVKGLSFKNSEILSWAHCESTKPGRS 317
Query: 210 ANRL 213
+ +
Sbjct: 318 TDSV 321
>gi|414873203|tpg|DAA51760.1| TPA: deoxyribodipyrimidine photolyase [Zea mays]
Length = 377
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/209 (58%), Positives = 161/209 (77%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG+E+ FDHGAP+FTVTN +V +V WE+ G+VAEWK FD + KF
Sbjct: 46 MAQRREVMEDGSELRFDHGAPYFTVTNGEVARVVGGWEARGIVAEWKATFACFDLATGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVP MNSICK+LC + GV +KFGV VG+ +WL+D++ WS++ LDG+
Sbjct: 106 TDFEKEGTAKKYVGVPAMNSICKSLCLEDGVVAKFGVTVGKMDWLQDRSSWSLASLDGKD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SP F +TGRPPPLDL+ P L L++IPV PCFALM+AFSEPL
Sbjct: 166 LGYFDYVVATDKNIASPAFSGLTGRPPPLDLSSFPRLPTALQDIPVRPCFALMVAFSEPL 225
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+++PV GFSF +S LSWA C+SSKPGR+
Sbjct: 226 ATVPVHGFSFNNSNSLSWAFCNSSKPGRA 254
>gi|357115159|ref|XP_003559359.1| PREDICTED: uncharacterized protein LOC100828433 [Brachypodium
distachyon]
Length = 375
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/226 (55%), Positives = 169/226 (74%), Gaps = 4/226 (1%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE +DG E+ FDHGAP+FTV++++V +V WE+ GLVAEWK FDR + KF
Sbjct: 44 MAQRREVMDDGTELRFDHGAPYFTVSSDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 103
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ ++G KKYVGVPGMNSICK+LC + GV ++FGV VG+ +WL++ + WS++ LDG+
Sbjct: 104 RDFDKEGTTKKYVGVPGMNSICKSLCLEDGVVARFGVTVGKMDWLQNGSSWSLTSLDGKD 163
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKNV S +F +TGRPPPLDL+ P+L+ ++IPV PCFALMLAFSEPL
Sbjct: 164 LGNFDYVVATDKNVASHKFSGLTGRPPPLDLSVFPNLSTMFQDIPVRPCFALMLAFSEPL 223
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
+ +PV+GFSF +S+ LSWA CDSSKPG R+C N +W ++
Sbjct: 224 AMVPVQGFSFYNSDSLSWAFCDSSKPG----RVCLPPNSQSWVLRS 265
>gi|226494307|ref|NP_001149840.1| deoxyribodipyrimidine photolyase [Zea mays]
gi|195634973|gb|ACG36955.1| deoxyribodipyrimidine photolyase [Zea mays]
Length = 377
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 160/209 (76%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG+E+ FDHGAP+FTVTN +V +V W + G+VAEWK FD + KF
Sbjct: 46 MAQRREVMEDGSELRFDHGAPYFTVTNGEVARVVGGWXARGIVAEWKATFACFDLATGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVP MNSICK+LC + GV +KFGV VG+ +WL+D++ WS++ LDG+
Sbjct: 106 TDFEKEGTAKKYVGVPAMNSICKSLCLEDGVVAKFGVTVGKMDWLQDRSSWSLASLDGKD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SP F +TGRPPPLDL+ P L L++IPV PCFALM+AFSEPL
Sbjct: 166 LGYFDYVVATDKNIASPAFSGLTGRPPPLDLSSFPRLPTALQDIPVRPCFALMVAFSEPL 225
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+++PV GFSF +S LSWA C+SSKPGR+
Sbjct: 226 ATVPVHGFSFNNSNSLSWAFCNSSKPGRA 254
>gi|14718305|gb|AAK72883.1|AC091123_2 hypothetical protein [Oryza sativa Japonica Group]
Length = 347
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 166/209 (79%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 88 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 147
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 148 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 207
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 208 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 267
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+ +PV+GFSF +S+ LSWA CDSSKPGR+
Sbjct: 268 TKVPVQGFSFNNSDYLSWAFCDSSKPGRA 296
>gi|222625916|gb|EEE60048.1| hypothetical protein OsJ_12845 [Oryza sativa Japonica Group]
Length = 377
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 166/209 (79%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 46 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 106 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 166 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 225
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+ +PV+GFSF +S+ LSWA CDSSKPGR+
Sbjct: 226 TKVPVQGFSFNNSDYLSWAFCDSSKPGRA 254
>gi|115455739|ref|NP_001051470.1| Os03g0784000 [Oryza sativa Japonica Group]
gi|108711417|gb|ABF99212.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|113549941|dbj|BAF13384.1| Os03g0784000 [Oryza sativa Japonica Group]
Length = 382
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 166/209 (79%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 51 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 110
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 111 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 170
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 171 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 230
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+ +PV+GFSF +S+ LSWA CDSSKPGR+
Sbjct: 231 TKVPVQGFSFNNSDYLSWAFCDSSKPGRA 259
>gi|218193854|gb|EEC76281.1| hypothetical protein OsI_13783 [Oryza sativa Indica Group]
Length = 377
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 166/209 (79%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+QRRE EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF
Sbjct: 46 MAQRREVMEDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKF 105
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +++G KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+
Sbjct: 106 TDFEKEGTIKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRD 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL
Sbjct: 166 LGHFDYVVATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPL 225
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+ +PV+GFSF +S+ LSWA CDSSKPGR+
Sbjct: 226 TKVPVQGFSFNNSDYLSWAFCDSSKPGRA 254
>gi|108711418|gb|ABF99213.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|215707008|dbj|BAG93468.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 208
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 160/201 (79%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
EDG E+ FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF + +++G
Sbjct: 2 EDGTELRFDHGAPYFTVSNDEVARVVSGWEARGLVAEWKAMFACFDREAGKFTDFEKEGT 61
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
KKYVGVPGMNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+ LG F+ VV
Sbjct: 62 IKKYVGVPGMNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRDLGHFDYVV 121
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF 188
A+DKN+ SPRF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL+ +PV+GF
Sbjct: 122 ATDKNIASPRFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPLTKVPVQGF 181
Query: 189 SFQDSEVLSWAHCDSSKPGRS 209
SF +S+ LSWA CDSSKPGR+
Sbjct: 182 SFNNSDYLSWAFCDSSKPGRA 202
>gi|357451403|ref|XP_003595978.1| hypothetical protein MTR_2g064620 [Medicago truncatula]
gi|355485026|gb|AES66229.1| hypothetical protein MTR_2g064620 [Medicago truncatula]
Length = 289
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 126/157 (80%), Gaps = 7/157 (4%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE +EDG E+ FDHGAPFF+V+ +V LV+EWES GLVAEW+ GSFD + KF
Sbjct: 33 MSQRREKTEDGKELHFDHGAPFFSVSKPEVARLVQEWESRGLVAEWREKFGSFDIQTLKF 92
Query: 61 VNIQQ-------DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSV 113
NI+Q +G++K++VGVPGMNSICKALC++ GVESKFGVG+GR EWL+D+ LWS+
Sbjct: 93 DNIEQVHKYSSYEGLSKRFVGVPGMNSICKALCNESGVESKFGVGIGRVEWLDDEKLWSL 152
Query: 114 SGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLD 150
G+DGQ+LGQF G+VASDKN+VS R DVTGR PPLD
Sbjct: 153 IGVDGQNLGQFKGLVASDKNIVSTRIADVTGRLPPLD 189
>gi|326512438|dbj|BAJ99574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/143 (60%), Positives = 112/143 (78%)
Query: 66 DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+G KKYVGVPGMNSICK+LC + GV KFG+ +G+ +WL+D++ WS++ DG LG F+
Sbjct: 36 EGTMKKYVGVPGMNSICKSLCQEDGVVGKFGITIGKMDWLQDRSSWSLASFDGTDLGSFD 95
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV 185
VVA+DKN+ S + +TG+PPPLDL+ P L+ +++IPV PCFALMLAFSEPLS +PV
Sbjct: 96 FVVATDKNIASRKVSGLTGKPPPLDLSVFPHLSAMIQDIPVRPCFALMLAFSEPLSMVPV 155
Query: 186 KGFSFQDSEVLSWAHCDSSKPGR 208
+GFSF +S LSWA CDSSKPGR
Sbjct: 156 QGFSFYNSYYLSWAFCDSSKPGR 178
>gi|168049602|ref|XP_001777251.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671353|gb|EDQ57906.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 349
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 141/235 (60%), Gaps = 7/235 (2%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MSQRRE EDG+E++FDHGA +FTV +V LV +W++ G+VA+W+ G+ + + +F
Sbjct: 31 MSQRREKVEDGSELMFDHGAQYFTVKTAEVQQLVDKWQASGIVADWEGRFGTLNVATGEF 90
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
V +D K+YVGVPGMN+ICKAL PGV++K+G V +W+E + WS+ DG++
Sbjct: 91 V---ED--TKRYVGVPGMNAICKALTTSPGVQAKYGAQVVGLDWVEGLDTWSLKFKDGEN 145
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F VV +DK P + P+ K+ + PCFA+M+AFS PL
Sbjct: 146 LGNFTAVVVADKGAAKLLLGKWLSIPYAVCGAGFPEWHKKVAAVKAAPCFAVMMAFSSPL 205
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNIKKGG 235
+ IP+ GF + S+++SWA DS KPGR+ + +C + T++ I + G
Sbjct: 206 TLIPLDGFVVEGSKIVSWAARDSCKPGRA--KTSSECWVVHSTAEYAAGIIAQAG 258
>gi|326513914|dbj|BAJ92107.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 293
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 107/148 (72%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
RRE +DG + FDHGAP+FTV+N++V +V WE+ GLVAEWK FDR + KF +
Sbjct: 118 RREVMDDGTGLRFDHGAPYFTVSNDEVARVVGGWEARGLVAEWKAMFACFDRETGKFRDF 177
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
++G KKYVGVPGMNSICK+LC + GV KFG+ +G+ +WL+D++ WS++ DG LG
Sbjct: 178 DKEGTMKKYVGVPGMNSICKSLCQEDGVVGKFGITIGKMDWLQDRSSWSLASFDGTDLGS 237
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDL 151
F+ VVA+DKN+ S + +TG+PPPL L
Sbjct: 238 FDFVVATDKNIASRKVSGLTGKPPPLGL 265
>gi|108711419|gb|ABF99214.1| amine oxidase, putative, expressed [Oryza sativa Japonica Group]
gi|215695182|dbj|BAG90373.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712265|dbj|BAG94392.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 255
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/132 (61%), Positives = 109/132 (82%)
Query: 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSP 137
MNSICK+LC + GV +KFGV +GR +W++D++ W ++ LDG+ LG F+ VVA+DKN+ SP
Sbjct: 1 MNSICKSLCLEDGVVAKFGVTIGRMDWIQDRSSWLLASLDGRDLGHFDYVVATDKNIASP 60
Query: 138 RFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLS 197
RF +TGRPPPLDL+ P L++ +++IPV PCFALMLAFSEPL+ +PV+GFSF +S+ LS
Sbjct: 61 RFSGLTGRPPPLDLSLLPQLSMMIQDIPVRPCFALMLAFSEPLTKVPVQGFSFNNSDYLS 120
Query: 198 WAHCDSSKPGRS 209
WA CDSSKPGR+
Sbjct: 121 WAFCDSSKPGRA 132
>gi|223947889|gb|ACN28028.1| unknown [Zea mays]
Length = 266
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 96/120 (80%)
Query: 90 GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149
GV +KFGV VG+ +WL+D++ WS++ LDG+ LG F+ VVA+DKN+ SP F +TGRPPPL
Sbjct: 24 GVVAKFGVTVGKMDWLQDRSSWSLASLDGKDLGYFDYVVATDKNIASPAFSGLTGRPPPL 83
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
DL+ P L L++IPV PCFALM+AFSEPL+++PV GFSF +S LSWA C+SSKPGR+
Sbjct: 84 DLSSFPRLPTALQDIPVRPCFALMVAFSEPLATVPVHGFSFNNSNSLSWAFCNSSKPGRA 143
>gi|406832394|ref|ZP_11091988.1| DNA photolyase FAD-binding protein [Schlesneria paludicola DSM
18645]
Length = 368
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 22/205 (10%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T ++ FDHGA +FTVT+ LV+ W G+ AEW G + V +
Sbjct: 78 RTATRRADPDLEFDHGAQYFTVTDPLFEPLVQSWIERGIAAEWH---GRIVEIDGSIVKV 134
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
+ + K+YVGVPGM ++ + L H ++ + + + + D +W + G++ G
Sbjct: 135 KPP-LPKRYVGVPGMTAMARQLAHDVPIQLQSRI----VQVIRDDRIWRIIDEGGRAYGP 189
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ +V S + S + D+ G P LA+++ IP+NPC+A+M+AF P++
Sbjct: 190 FDDLVVS---LPSTQAADLLGEHP---------LAMEIRAIPMNPCWAVMVAFERPVNVN 237
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
F Q L+W +SSKPGR
Sbjct: 238 WDGAFVHQSP--LAWVARNSSKPGR 260
>gi|444915214|ref|ZP_21235350.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
gi|444713796|gb|ELW54688.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
Length = 338
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 26/211 (12%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RRE DG+ FDHGA +FT + V W G+ AEW+ G+ D
Sbjct: 53 MSTRRE---DGSS--FDHGAQYFTARDEGFQRQVETWVEQGIAAEWRARFGTLD---NGA 104
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ ++ +G +YVGVPGM+++ +A + V+ + GV V ++ W+++ G++
Sbjct: 105 LTLKDEG-PVRYVGVPGMSALAQAFASR--VDVRCGVRVEHVR--REQEAWALTSETGEA 159
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F+ VVA+ V +P + PL L +P+L+ ++ + + PC+++M +F P+
Sbjct: 160 LGTFHAVVAA---VPAP-------QAVPL-LAGSPELSARVAGVRMEPCWSVMASFDTPV 208
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
+ V G +F LSWA D+SKPGR A
Sbjct: 209 -PLAVDG-AFIHGSPLSWAARDNSKPGRPAG 237
>gi|357451407|ref|XP_003595980.1| hypothetical protein MTR_2g064640 [Medicago truncatula]
gi|355485028|gb|AES66231.1| hypothetical protein MTR_2g064640 [Medicago truncatula]
Length = 237
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
DL P+L+ KL +PV PCFA+MLAF+EPLS+IPVKGFS ++S+VLSWA+CDS KPGRS
Sbjct: 60 DLKLLPELSEKLHNLPVRPCFAVMLAFAEPLSTIPVKGFSIKNSKVLSWAYCDSRKPGRS 119
Query: 210 AN 211
Sbjct: 120 TT 121
>gi|383457618|ref|YP_005371607.1| FAD dependent oxidoreductase [Corallococcus coralloides DSM 2259]
gi|380730498|gb|AFE06500.1| FAD dependent oxidoreductase [Corallococcus coralloides DSM 2259]
Length = 340
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 27/205 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++E G+ FDHGA +FT ALV W + G+ AEW+ +G+ R + +
Sbjct: 60 RRSAEGGS---FDHGAQYFTAREPLFRALVDAWVADGVAAEWRGRIGTLTRGA-----VT 111
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQ 123
+ +YVGVPGM+++ KAL G++ + GV R E + + L W ++ G+ LG
Sbjct: 112 PAKASVRYVGVPGMSAVAKALAD--GLDVRTGV---RVERVAREGLAWRLTSETGEDLGL 166
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
VVA+ + L AP LA + ++PC+A+M F P+ ++
Sbjct: 167 AEVVVAAVPAPQAVPL-----------LAGAPTLAAQAGTARMSPCWAVMARFDAPV-AV 214
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
+ G +DS LSW D+SKPGR
Sbjct: 215 ELDGAFVEDS-ALSWVARDTSKPGR 238
>gi|87306827|ref|ZP_01088973.1| amine oxidase, flavin-containing [Blastopirellula marina DSM 3645]
gi|87290200|gb|EAQ82088.1| amine oxidase, flavin-containing [Blastopirellula marina DSM 3645]
Length = 326
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R ++ ++ FDHGA +FT + V W + G++A WK +G VS N
Sbjct: 37 RMSTRRVEDLHFDHGAQYFTARDPRFQRQVEAWVAAGVIAPWKGAIGVLQSGEVSTPETN 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVE-SKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
+YVGVP MN+ K L V+ S+ V R WS++ G++L
Sbjct: 97 ------PVRYVGVPAMNAPAKRLAAGLNVQLSRRVQTVAR-----SGAGWSLTDESGETL 145
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G F+ +V + V P + L AP A ++E++ +NPC+A ++ F + L
Sbjct: 146 GPFDALVCT----VPP------AQAADLLCDVAPTYAAQVEQVTLNPCWATLVQFEQRL- 194
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLC 214
+P+ G DS LSW +SSKP R A+R C
Sbjct: 195 PLPLDGAFVHDSP-LSWIARNSSKPQRDASRDC 226
>gi|296284203|ref|ZP_06862201.1| putative deoxyribodipyrimidine photolyase [Citromicrobium
bathyomarinum JL354]
Length = 300
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 38/214 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR DG FDHGA +FT VR WE+ G+VA W
Sbjct: 30 MATRR-VEHDGATFRFDHGAQYFTAREMAFQTQVRAWEADGIVAPWPA------------ 76
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+DG +VG PGMN +A+ +E +FG + + D+ W V G +G
Sbjct: 77 ---AKDG---AWVGTPGMNVPIRAMAE--ALEVRFGTRIAGL--VPDRGGWRVEG-EGAP 125
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+F+ VV + P + PL APD A ++ PC+ M+AF +
Sbjct: 126 DDRFDAVV-----IAVP-----AEQAAPLLAVHAPDFAEDARDVKTEPCWTAMVAFESRV 175
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLC 214
+ + D + WA +S+KPGR A++ C
Sbjct: 176 DAPD----TLADEGAIGWAARNSAKPGRDADQEC 205
>gi|325107068|ref|YP_004268136.1| FAD dependent oxidoreductase [Planctomyces brasiliensis DSM 5305]
gi|324967336|gb|ADY58114.1| FAD dependent oxidoreductase [Planctomyces brasiliensis DSM 5305]
Length = 341
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 1 MSQRRETSEDG-NEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKK 59
MS RR E G FDHGA +FT + V++W +VAEWK G F +SK
Sbjct: 42 MSLRRVLPEGGLPSFQFDHGAQYFTARTPEFQKQVQDWLEREVVAEWK---GPFVSLSKG 98
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ 119
V G + +YVG PGMN IC+ L + V G+ V E E+ W +S
Sbjct: 99 TVGPDPGGNDPRYVGTPGMNQICRDLAEEVCVTC--GIRVTGLEKTEEG--WQLSAETSA 154
Query: 120 SL------GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173
+ F+ VV S + +P+ + + P D++F L ++ + PC A M
Sbjct: 155 TKEPLTLDSTFDAVVCS---IPAPQAKTLL----PDDISFQQQLG----DVKIAPCRAAM 203
Query: 174 LAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
+ F E + + G QDSE L W + +KPGR
Sbjct: 204 VTFDEKI-DVDFGGAFVQDSE-LRWIAREPTKPGR 236
>gi|354566242|ref|ZP_08985415.1| amine oxidase [Fischerella sp. JSC-11]
gi|353546750|gb|EHC16198.1| amine oxidase [Fischerella sp. JSC-11]
Length = 327
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 26/205 (12%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + E +FD+GA +FT + ALV W G+V EW +N ++S+K
Sbjct: 46 MATRRIRNSQYGEGIFDYGAQYFTAQDPKFQALVNSWIQEGIVKEWSLN----QQISRKV 101
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
Y GV SI + L V + + F W +D W V
Sbjct: 102 Y----------YRGVNSNRSIAQHLAENLDVHTN--IKAISFAWQDDH--WQV------- 140
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
L N +D +++P + P+ +LEEI +PC AL+ ++P
Sbjct: 141 LTANNETFLADVLILTPPLPQTLELLDRSQIQLPPETRHRLEEIVYHPCIALLALLAQP- 199
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSK 205
S IP G D +LSW C+ K
Sbjct: 200 SQIPSPGGMHLDGTLLSWIACNQKK 224
>gi|341615778|ref|ZP_08702647.1| putative deoxyribodipyrimidine photolyase [Citromicrobium sp.
JLT1363]
Length = 309
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 38/214 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + FDHGA +FT A VR WE G+VA W
Sbjct: 39 MATRR-VEHESETYAFDHGAQYFTARELAFQAQVRAWEGDGIVARWPA------------ 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VG PGMN+ +A+ ++ +FG + L ++ W + G +G
Sbjct: 86 ------AKEDAWVGTPGMNAPIRAMSE--ALDVRFGTRITGL--LAERGGWLLEG-EGVP 134
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+F+ VV V P + PL T APD A ++ PC+ M+AF +
Sbjct: 135 ENRFDTVV-----VAVP-----AEQVAPLLGTHAPDFAEDARDVTSEPCWTAMVAFEGRV 184
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLC 214
+ + D + WA +S+KPGR A++ C
Sbjct: 185 DAPD----TLTDEGAIGWAARNSAKPGRDADQEC 214
>gi|283779092|ref|YP_003369847.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
gi|283437545|gb|ADB15987.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
Length = 824
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TSE + FDHGA +FT + V L W G++A W R+ + N+Q
Sbjct: 521 RRTSEG---LAFDHGAQYFTARDERVQRLAESWAEQGIIAPWT------GRIVAREGNVQ 571
Query: 65 QDGMNK--KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
D +YVG P MNS CK L + + R D W + + + G
Sbjct: 572 TDVSKSIARYVGQPTMNSFCKHLATGLTTHLEHTITAAR----RDGEAWWLDFAEHPTQG 627
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ ++ S SP G+ + + AP LA +I + PC+AL++AF P+
Sbjct: 628 PFDWIIGS-----SP-----AGQAAKIFASGAPSLAAAAAKITMTPCWALLVAFDRPV-E 676
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSANRLC 214
I G +F + L+W SSKP R A C
Sbjct: 677 IDYDG-AFINQGALTWIARSSSKPSRKAAPDC 707
>gi|329848116|ref|ZP_08263144.1| FAD dependent oxidoreductase family protein [Asticcacaulis
biprosthecum C19]
gi|328843179|gb|EGF92748.1| FAD dependent oxidoreductase family protein [Asticcacaulis
biprosthecum C19]
Length = 318
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 36/224 (16%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RRE DG + FDHGA +FTV + A V WE+ GLVA W
Sbjct: 41 MSTRRE-DRDGRNLFFDHGAQYFTVRDRRFAAQVATWEAQGLVAPWP------------- 86
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
Q G + Y G P M + + GV+ FGV + + D + W + G G+
Sbjct: 87 ----QAG-PQAYTGTPMMCAPLVDMAQAVGVQ--FGVRIDAV--VRDGDGWQLVGEQGR- 136
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
G F+ V+ + + + + D+ P AP+LA PC+ +++ S PL
Sbjct: 137 FGPFDAVIVA---LPAEQAADLLHWP-------APELAATAARQRSQPCWTTLVSLSAPL 186
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTS 224
+ VL+W +SSKPGR+A + +W +
Sbjct: 187 PGH--AAVTRPKDPVLAWIADNSSKPGRTAESAWVLQSTPDWAA 228
>gi|386334512|ref|YP_006030683.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
Po82]
gi|334196962|gb|AEG70147.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
Po82]
Length = 333
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
V + P D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 159 VLALPAPELPALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDG 209
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
D ++L+WA DS+KPGR
Sbjct: 210 IRIDD-DMLAWAARDSAKPGR 229
>gi|421900024|ref|ZP_16330387.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
MolK2]
gi|206591230|emb|CAQ56842.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
MolK2]
Length = 333
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
V + P D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 159 VLALPAPELPALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDG 209
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
D ++L+WA DS+KPGR
Sbjct: 210 IRIDD-DMLAWAARDSAKPGR 229
>gi|395492587|ref|ZP_10424166.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26617]
Length = 309
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 49/213 (23%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR DG+ + FDHGA +FT + A V +W + G+VA W
Sbjct: 39 MATRRVDGPDGD-VSFDHGAQYFTARDPAFGAQVEQWAAAGIVAAWPA------------ 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGV-----GRFEWLEDKNLWSVSG 115
+VG PGMN++ KA+ V +G V G WL
Sbjct: 86 ------AGEDAWVGTPGMNALVKAITDDRDV--TWGAKVDAIRRGDGGWL---------- 127
Query: 116 LDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
LD S +F+ V+ V +P + PL + P +A + P PC+ M+A
Sbjct: 128 LDPVSDTRFDAVI-----VATP-----AEQAGPLLVAHDPAMAAIAQACPSAPCWTAMVA 177
Query: 176 FSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
F + + + G +DS ++ WA +S+KPGR
Sbjct: 178 FED---RVAIAGDIVRDSGIIGWAARNSAKPGR 207
>gi|395763144|ref|ZP_10443813.1| FAD dependent oxidoreductase [Janthinobacterium lividum PAMC 25724]
Length = 329
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 24/210 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ G+ DHGA +FT + + A V WE G+ +W + L S + +
Sbjct: 42 RMSTRRGDGWQCDHGAQYFTARHPEFRAEVTRWEQAGVAGQWHLQLPS---TAADGASGS 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG-Q 123
D +++VG+P M+SI L + + GV + + + + W + D Q L +
Sbjct: 99 DDTPAQRFVGMPRMSSIASWLAADLPLHT--GVAISALQ--REDSAWRLQAQDAQPLADR 154
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
++ VV + V +P + PL AP+ A + C+A+ML +++PL+
Sbjct: 155 YDAVVLA---VPAP-------QAVPLLRQVAPEQAALAAGTTMAGCWAMMLEYAQPLA-- 202
Query: 184 PVKGF--SFQDSEVLSWAHCDSSKPGRSAN 211
GF +F ++ L W DS+KPGR+ +
Sbjct: 203 --LGFNAAFINAGPLRWVARDSAKPGRNGH 230
>gi|344167803|emb|CCA80051.1| putative nad/fad-dependent oxidoreductase [blood disease bacterium
R229]
Length = 333
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G R + + +D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWG--HRTADGLLADTRD-- 104
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+YVG PGM+++ ++L ++ +FG V R + W++ G + Q + VV
Sbjct: 105 ETRYVGQPGMSALVRSLATP--LDVRFGHAVTRVA--QTGKGWTLH-RSGANAAQADMVV 159
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF 188
+ P D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 160 LALPAPELPALFDEGGTPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDGI 210
Query: 189 SFQDSEVLSWAHCDSSKPGR 208
D ++L+WA D++KPGR
Sbjct: 211 RIDD-DMLAWAARDNTKPGR 229
>gi|85709106|ref|ZP_01040172.1| hypothetical protein NAP1_07685 [Erythrobacter sp. NAP1]
gi|85690640|gb|EAQ30643.1| hypothetical protein NAP1_07685 [Erythrobacter sp. NAP1]
Length = 319
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 88/212 (41%), Gaps = 41/212 (19%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR GN + FDHGA +FT + + +V+EWE G+VA W GS D
Sbjct: 44 MAARRAEIA-GNVVSFDHGAQYFTARDARFVEVVKEWERLGVVARWD-GAGSSD------ 95
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VGVPGMN +AL H V WS
Sbjct: 96 ---------PAFVGVPGMNGPIRALAHPLDVR------------------WSTRAETLTR 128
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDL--TFAPDLAVKLEEIPVNPCFALMLAFSE 178
LG+ V A D++ + D+ PD A + PC+A+M AFS+
Sbjct: 129 LGEEWHVDAGDESFTADTVLVAVPAEQAADILAVTVPDFAKVAASVQSEPCWAVMAAFSQ 188
Query: 179 PLSSIPVKGFSFQD-SEVLSWAHCDSSKPGRS 209
L V S +D S +SWA +S+KP R+
Sbjct: 189 KLD---VTADSIRDESASISWAARNSAKPDRA 217
>gi|307110486|gb|EFN58722.1| hypothetical protein CHLNCDRAFT_16675, partial [Chlorella
variabilis]
Length = 406
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
+LFDH +FT T+ +V EW++ G+V W+ +G FV DG ++Y+
Sbjct: 69 LLFDHACQYFTATHPSFQQIVDEWQAAGVVQRWEGPVGRLR--GGSFVP---DGGQERYM 123
Query: 74 GVPGMNSICKALCHQPGVESKFGVG----VGRFEWLEDKNL----WSVSGLDGQSLGQFN 125
GM + + L + E + G G V R +W+ + W ++G G+ G ++
Sbjct: 124 ARGGMRQLAEHLAGRASREQRDGSGGLVEVRRPQWVSEARFTPDGWRLAGC-GRDQGVYD 182
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP- 184
VV + + R G P +A +L + + + LM AF P+ ++P
Sbjct: 183 AVVIAHNGKCANRLAAPMG---------VPAVAAQLRRLRLAATWVLMAAFRSPV-AVPG 232
Query: 185 -VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDC 217
++G Q +VL+WA +++K G R +C
Sbjct: 233 GMEGAFIQGCQVLAWAGNNTAKLGPGGGRDGVEC 266
>gi|344173737|emb|CCA88910.1| putative nad/fad-dependent oxidoreductase [Ralstonia syzygii R24]
Length = 333
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 86/200 (43%), Gaps = 19/200 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G R S +D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWG--HRTSNGLQADTRD-- 104
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+YVG PGM+++ ++L ++ +FG V R + W++ G Q + VV
Sbjct: 105 ETRYVGQPGMSALVRSLATP--LDVRFGHAVTRVA--QTGKGWTLH-RSGADAAQADMVV 159
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF 188
+ P D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 160 LALPAPELPALFDEGGAPAALRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDGI 210
Query: 189 SFQDSEVLSWAHCDSSKPGR 208
D ++L+WA D++KPGR
Sbjct: 211 RIDD-DMLAWAARDNTKPGR 229
>gi|333899137|ref|YP_004473010.1| amine oxidase [Pseudomonas fulva 12-X]
gi|333114402|gb|AEF20916.1| amine oxidase [Pseudomonas fulva 12-X]
Length = 330
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 21/207 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + A V +W++ G V W NL + + ++
Sbjct: 42 RMASKRSDAGALDLGAQYFTARDRRFAATVAQWQARGWVEPWTPNLYQY---ANGVLSPS 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +A+ + KF + E + W + +G+S G F
Sbjct: 99 AD-EQVRWVGNPRMSAITRAMLG--ALPVKFSCRI--TEVFRGEQHWHLLDAEGESHGPF 153
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
V+ + +P+ + L AP LA + + + P +A+ LAF+EPL + P
Sbjct: 154 AQVIIATP---APQASAL--------LATAPKLAGTVAGVTMEPTWAVALAFAEPLQT-P 201
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSAN 211
++G QD EVL W + SKPGR A+
Sbjct: 202 LEGCFVQD-EVLDWTARNRSKPGRDAS 227
>gi|300692454|ref|YP_003753449.1| nad/fad-dependent oxidoreductase [Ralstonia solanacearum PSI07]
gi|299079514|emb|CBJ52192.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
PSI07]
Length = 333
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM+++ ++L ++ +FG V R + W++ G + Q + V
Sbjct: 104 DETRYVGQPGMSALVRSLATP--LDVRFGHAVTRVA--QTGKGWTLH-RSGANAAQADMV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
V + P D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 159 VLALPAPELPALFDEGGTPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDG 209
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
D ++L+WA D++KPGR
Sbjct: 210 IRIDD-DMLAWAARDNTKPGR 229
>gi|221068158|ref|ZP_03544263.1| FAD dependent oxidoreductase [Comamonas testosteroni KF-1]
gi|220713181|gb|EED68549.1| FAD dependent oxidoreductase [Comamonas testosteroni KF-1]
Length = 304
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 1 MSQRRETSEDGN-EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKK 59
MS RR S DG+ + DHGA +FT +N + + V WE G W+ +G D
Sbjct: 1 MSTRR--SSDGDMDWQCDHGAQYFTASNTEFRSQVFAWEQAGAAQVWQGRIGKHD--GHD 56
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVG-RFEWLEDKNLWSVSGLDG 118
FV QD +++VG P M S + V + RF+W ++ L
Sbjct: 57 FV--LQDRPLERFVGTPRMTSPAAHM-----VRGMHAISQSVRFQWQA-----TIQPLQP 104
Query: 119 QSLGQFNGVVASDKNVVSP-RFRDVTGRPP-----PLDLTFAPDLAVKLEEIPVNPCFAL 172
+S F ++ S ++ P R++ V P PL AP+ A + PC+AL
Sbjct: 105 RSA--FGWILQSQEHGTEPHRYQAVVLAVPAPQAAPLLAGVAPEAAALASNARMLPCWAL 162
Query: 173 MLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
M+ +PL S+PV G F + L W DSSKP R
Sbjct: 163 MVRCHQPL-SLPVDG-CFVEHSPLRWIARDSSKPSR 196
>gi|297828968|ref|XP_002882366.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297328206|gb|EFH58625.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ + LV W GLV EWK +G + +Y+
Sbjct: 142 LIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEVGGSFSQFPSS--SPPRYI 199
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEW---LEDKN-LWSVSGLDGQSLGQFNGVVA 129
V GM S+ +L +ES+ V + R W LE N +W +S +G GQF+ +V
Sbjct: 200 AVNGMLSLADSLL----LESQM-VNLVRPCWISKLEPLNGMWHLSE-NGTPRGQFDVIVI 253
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFS 189
+ + R +G P +A +++++ ++ +AL+ AF +PL ++ +G
Sbjct: 254 AHNGKCANRLLSASG---------LPLVAKQMKKLDLSSIWALLAAFDDPLPTVNFEGAF 304
Query: 190 FQDSEVLSWAHCDSSKPGRSANRLC 214
+ E LSW +S+K G N C
Sbjct: 305 VKGVESLSWMGNNSAKLGNGRNPHC 329
>gi|148907176|gb|ABR16731.1| unknown [Picea sitchensis]
Length = 167
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 161 LEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
++ + + CFALMLAFS+PL++IPV G++ + S++LSWA CDS KPGRS N
Sbjct: 1 MQTVLASSCFALMLAFSQPLTTIPVTGYNVRGSKILSWASCDSRKPGRSNN 51
>gi|296120560|ref|YP_003628338.1| DNA photolyase FAD-binding protein [Planctomyces limnophilus DSM
3776]
gi|296012900|gb|ADG66139.1| DNA photolyase FAD-binding protein [Planctomyces limnophilus DSM
3776]
Length = 843
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 22/198 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FDHG + T + +R WES GL+ W+ L + R + + +G +YVG+
Sbjct: 538 FDHGCQYITAKSPQFERSLRSWESQGLITPWQ-GLLAAQRTDGSWKELAANG--PRYVGL 594
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
PGM S+ + L G++ V + + E + N W + G G F+ ++ + +
Sbjct: 595 PGMTSMARHLSQ--GLKVHQEVQIQKVERI--ANQWQLQSTQGTVAGPFDQLILA---IP 647
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQD--S 193
+ + + G P LA L IP++PC+ +M S+ L ++P G+ +
Sbjct: 648 AGQAARLVGEHP---------LAETLARIPMDPCWTVMATLSDRL-NLPFDGYLSHAALA 697
Query: 194 EVLSWAHCDSSKPGRSAN 211
+ WA D+SKP R +
Sbjct: 698 PAVGWAARDTSKPKRPTD 715
>gi|300705105|ref|YP_003746708.1| nad/fad-dependent oxidoreductase [Ralstonia solanacearum CFBP2957]
gi|299072769|emb|CBJ44124.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
CFBP2957]
Length = 333
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ + G V R + W++ +G Q + V
Sbjct: 104 DETRYVGQPGMGALVRSLAAP--LDVRLGHAVTRVA--QAGTGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
V + P D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 159 VLALPAPELPALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDG 209
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
D ++L+WA DS+KPGR
Sbjct: 210 IRIDD-DMLAWAARDSAKPGR 229
>gi|410089559|ref|ZP_11286173.1| amine oxidase, flavin-containing protein [Pseudomonas viridiflava
UASWS0038]
gi|409763094|gb|EKN48079.1| amine oxidase, flavin-containing protein [Pseudomonas viridiflava
UASWS0038]
Length = 328
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPSLYNFQNGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + PL L AP LA + + ++P +A+ LAFS PL +
Sbjct: 150 PFSHVI-----IATP-----APQATPL-LAAAPKLASVVAGVKMDPTWAIALAFSTPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS V W + SKP R
Sbjct: 199 -PMQGCFVQDSPV-DWLARNRSKPER 222
>gi|398869854|ref|ZP_10625211.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM74]
gi|398210266|gb|EJM96918.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM74]
Length = 328
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQAKGWVAEWTPQLYTFH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAVALAFETPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|398952320|ref|ZP_10674709.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM33]
gi|398155248|gb|EJM43698.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM33]
Length = 328
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQARGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|449443231|ref|XP_004139383.1| PREDICTED: uncharacterized protein LOC101219713 [Cucumis sativus]
Length = 545
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFTVT+N LV W + LV EWK +G + + +FV + +Y+
Sbjct: 150 LMFDHAAQFFTVTDNQFAQLVDGWLAADLVKEWKGTVGELE-LGGRFVPMSS---CPRYI 205
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
G GM + +L Q + + V R W+ +W +S +G+ G F+ +V
Sbjct: 206 GTNGMRPLADSLLSQTSL-----INVIRPCWISKLEPFNGMWHLSE-NGKPCGHFDAIVI 259
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL------SSI 183
+ + R +G P +A +++ + ++ +AL+ AF +PL
Sbjct: 260 AHNGKCANRLLSTSG---------LPLIARQMKRLELSSIWALLAAFEDPLPFPDTAEKF 310
Query: 184 PVKGFSFQDSEVLSWAHCDSSK 205
P +G + + LSW ++ K
Sbjct: 311 PFEGAFVKGVDSLSWMANNNKK 332
>gi|395650274|ref|ZP_10438124.1| FAD dependent oxidoreductase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 328
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 21/207 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G +WK L +F K
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQNNGWAEQWKPQLYNF----KAGQLTP 95
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++VG P M++I +AL VE FG + E + K W++ DG + G F
Sbjct: 96 SPDEQIRWVGTPRMSAITRALLDDLPVE--FGCRIT--EVFQGKQHWNLLDADGGNRGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LATAPKLASVAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSAN 211
++G QDS L W + SKPGR +
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDST 225
>gi|398889399|ref|ZP_10643242.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM55]
gi|426411465|ref|YP_007031564.1| FAD dependent oxidoreductase [Pseudomonas sp. UW4]
gi|398189521|gb|EJM76795.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM55]
gi|426269682|gb|AFY21759.1| FAD dependent oxidoreductase [Pseudomonas sp. UW4]
Length = 328
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQARGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|449483109|ref|XP_004156495.1| PREDICTED: uncharacterized protein LOC101226129 [Cucumis sativus]
Length = 536
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 29/202 (14%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFTVT+N LV W + LV EWK +G + + +FV + +Y+
Sbjct: 150 LMFDHAAQFFTVTDNQFAQLVDGWLAADLVKEWKGTVGELE-LGGRFVPMSS---CPRYI 205
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
G GM + +L Q + + V R W+ +W +S +G+ G F+ +V
Sbjct: 206 GTNGMRPLADSLLSQTSL-----INVIRPCWISKLEPFNGMWHLSE-NGKPCGHFDAIVI 259
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL------SSI 183
+ + R +G P +A +++ + ++ +AL+ AF +PL
Sbjct: 260 AHNGKCANRLLSTSG---------LPLIARQMKRLELSSIWALLAAFEDPLPFPDTAEKF 310
Query: 184 PVKGFSFQDSEVLSWAHCDSSK 205
P +G + + LSW ++ K
Sbjct: 311 PFEGAFVKGVDSLSWMANNNKK 332
>gi|428183286|gb|EKX52144.1| hypothetical protein GUITHDRAFT_133871 [Guillardia theta CCMP2712]
Length = 405
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ R+ G + +HGAP F V + + L+ + S G+V E + S D +K
Sbjct: 1 MATRKTREHPG--LAINHGAPLFVVDDPEFTGLMERYVSKGVVKESSAQVYSLDWKTK-- 56
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++Q M KK+V P M S+C++L GV+ ++ V E + W + +
Sbjct: 57 -GMEQVKMAKKFVAQPDMTSLCESLLE--GVQVQYQTQVS--EISKRDGEWVFFDKEKKE 111
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPL-----DLTFAPDLAVKLEEIPVNPCFALMLA 175
+G+F+ V + V R+ V G PPPL + L +L+ + +P MLA
Sbjct: 112 VGRFDWCVVTSHTVGHKRWEQVFGSPPPLQKLSQEFPALNSLVGELQAVRSSPVMVAMLA 171
Query: 176 F----SEPLSSIPVKGFSFQDSEVLS 197
+ ++ + S+P +V+S
Sbjct: 172 YQGEGADMIDSLPFDVLDVSHHDVIS 197
>gi|421889301|ref|ZP_16320345.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
K60-1]
gi|378965341|emb|CCF97093.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
K60-1]
Length = 333
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R + W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRVA--QAGTGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
V + P G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 159 VLALPAPELPALFGEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDG 209
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
D ++L+WA DS+KPGR
Sbjct: 210 IRIDD-DMLAWAARDSAKPGR 229
>gi|83746114|ref|ZP_00943169.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Ralstonia solanacearum UW551]
gi|83727297|gb|EAP74420.1| NADPH-dependent glutamate synthase beta chain and related
oxidoreductases [Ralstonia solanacearum UW551]
Length = 333
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 49 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 104 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 158
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
V + D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 159 VLALPAPELSALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDG 209
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
D ++L+WA DS+KPGR
Sbjct: 210 IRIDD-DMLAWAARDSAKPGR 229
>gi|207742386|ref|YP_002258778.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
IPO1609]
gi|206593776|emb|CAQ60703.1| nad/fad-dependent oxidoreductase protein [Ralstonia solanacearum
IPO1609]
Length = 354
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 21/201 (10%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V V GLV W G + +Q D
Sbjct: 70 EGAPAYAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQADTR 124
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG PGM ++ ++L ++ +FG V R ++ W++ +G Q + V
Sbjct: 125 DEARYVGQPGMGALVRSLAAP--LDVRFGHAVTRV--VQAGKGWTLH-RNGADAAQADIV 179
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
V + D G P L T AP + PC+ALM+ F++PL +P G
Sbjct: 180 VLALPAPELSALFDEGGAPATLRDTIAP--------VRYAPCWALMMGFAQPLP-LPYDG 230
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
D ++L+WA DS+KPGR
Sbjct: 231 IRIDD-DMLAWAARDSAKPGR 250
>gi|254244451|ref|ZP_04937773.1| hypothetical protein PA2G_05309 [Pseudomonas aeruginosa 2192]
gi|126197829|gb|EAZ61892.1| hypothetical protein PA2G_05309 [Pseudomonas aeruginosa 2192]
Length = 327
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 35/211 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRIT--EVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
E L + PV+G DS + +W C+ SKPGR
Sbjct: 194 EVLDT-PVQGCFVHDSPI-AWLACNRSKPGR 222
>gi|107099676|ref|ZP_01363594.1| hypothetical protein PaerPA_01000694 [Pseudomonas aeruginosa PACS2]
gi|254238602|ref|ZP_04931925.1| hypothetical protein PACG_04757 [Pseudomonas aeruginosa C3719]
gi|386060814|ref|YP_005977336.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
gi|392986326|ref|YP_006484913.1| oxidoreductase [Pseudomonas aeruginosa DK2]
gi|416855515|ref|ZP_11911546.1| putative oxidoreductase [Pseudomonas aeruginosa 138244]
gi|419754595|ref|ZP_14280955.1| putative oxidoreductase [Pseudomonas aeruginosa PADK2_CF510]
gi|421182719|ref|ZP_15640191.1| hypothetical protein PAE2_4670 [Pseudomonas aeruginosa E2]
gi|424944566|ref|ZP_18360329.1| putative oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|451985077|ref|ZP_21933308.1| COG3380: Amine oxidase, flavin-containing [Pseudomonas aeruginosa
18A]
gi|126170533|gb|EAZ56044.1| hypothetical protein PACG_04757 [Pseudomonas aeruginosa C3719]
gi|334842872|gb|EGM21471.1| putative oxidoreductase [Pseudomonas aeruginosa 138244]
gi|346061012|dbj|GAA20895.1| putative oxidoreductase [Pseudomonas aeruginosa NCMG1179]
gi|347307120|gb|AEO77234.1| putative oxidoreductase [Pseudomonas aeruginosa M18]
gi|384399008|gb|EIE45411.1| putative oxidoreductase [Pseudomonas aeruginosa PADK2_CF510]
gi|392321831|gb|AFM67211.1| putative oxidoreductase [Pseudomonas aeruginosa DK2]
gi|404541465|gb|EKA50822.1| hypothetical protein PAE2_4670 [Pseudomonas aeruginosa E2]
gi|451757251|emb|CCQ85831.1| COG3380: Amine oxidase, flavin-containing [Pseudomonas aeruginosa
18A]
gi|453042707|gb|EME90446.1| oxidoreductase [Pseudomonas aeruginosa PA21_ST175]
Length = 327
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 38/234 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNI 231
E L + PV+G DS + +W C+ SKPGR D + TS+ R +I
Sbjct: 194 EVLDT-PVQGCFVHDSPI-AWLACNRSKPGRDTT---LDTWVLHATSQWSRQHI 242
>gi|398923154|ref|ZP_10660518.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM48]
gi|398175696|gb|EJM63441.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM48]
Length = 328
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQAKGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|407363806|ref|ZP_11110338.1| oxidoreductase [Pseudomonas mandelii JR-1]
Length = 328
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQSNGWVAEWTPQLYTFH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + + P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMEPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|167627222|ref|YP_001677722.1| NAD/FAD-dependent oxidoreductase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597223|gb|ABZ87221.1| NAD/FAD-dependent oxidoreductase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 348
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT + ++ G++ W+ N + + +N +
Sbjct: 50 RMSTRYADPYYFDHGAQYFTAKFFEFKEFLKPMIDQGIIKNWQANFVEIK--NSEIINQK 107
Query: 65 Q-DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D K YVG P MN++ + L G++ VG ++ LW V + Q LG
Sbjct: 108 SWDNEYKDYVGSPRMNAVAQYLAQ--GLDIYLNTRVGSIT--KEDRLWIVKDDNNQFLGC 163
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ ++ + + S + +D+ PP + +F ++ I ++ CF+LML + + + ++
Sbjct: 164 FDWIIFA---IPSDQLKDL----PPQNTSFYNHIS----SIKMDSCFSLMLGYDKEI-NL 211
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGRSA 210
D E++SW +SSKP R+
Sbjct: 212 NFDAALVHD-EIISWISLNSSKPDRNT 237
>gi|398914028|ref|ZP_10656752.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM49]
gi|398179237|gb|EJM66853.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM49]
Length = 328
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQAKGWVAEWTPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I +AL +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRALLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|398876031|ref|ZP_10631191.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM67]
gi|398205323|gb|EJM92107.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM67]
Length = 328
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQAKGWVAEWAPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVIVATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNI 231
++G QDS L W + SKPGR KD + TS R +I
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDNT---KDTWVLHATSTWSRQHI 242
>gi|218893754|ref|YP_002442623.1| putative oxidoreductase [Pseudomonas aeruginosa LESB58]
gi|218773982|emb|CAW29797.1| putative oxidoreductase [Pseudomonas aeruginosa LESB58]
Length = 327
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 35/211 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDSE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
E L + PV+G DS + +W C+ SKPGR
Sbjct: 194 EVLDT-PVQGCFVHDSPI-AWLACNRSKPGR 222
>gi|110679508|ref|YP_682515.1| hypothetical protein RD1_2239 [Roseobacter denitrificans OCh 114]
gi|109455624|gb|ABG31829.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 322
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT +D + G VA W L F ++
Sbjct: 41 RMSTRRADVFQFDHGAQYFTARGDDFQRFLAAHIEQGTVAMWCPRLACFGGQPPQWTA-- 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+YVGVPGMN++CKA+ V + V E W + DG+ G F
Sbjct: 99 -----PRYVGVPGMNALCKAMAGDVEVRHETRV----LELERKDGRWHIGTADGEGFGPF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V +S +P + P +FA L + + C++LML F + +
Sbjct: 150 DWVFSS-----APAEQSAALLPACFSGSFA------LGQARMLGCYSLMLGF-DAAPDLA 197
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSA--NRLCKDCN 218
+ +S L+W +S+KPGRSA + LC+ N
Sbjct: 198 WDAAAVLNSP-LAWLAVNSTKPGRSAGFSVLCQSSN 232
>gi|17545252|ref|NP_518654.1| transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427543|emb|CAD14061.1| probable nad/fad-dependent oxidoreductase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 343
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R E FDHGA F V V GLV W G + +Q
Sbjct: 55 RVLPEGAPTHAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADGLQ 109
Query: 65 QDGMNK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D ++ +YVG PGM+++ ++L ++ + G V R W++ DG Q
Sbjct: 110 ADTRDEARYVGQPGMSALVRSLATP--LDVRLGHAVTRVA--HAGKGWTLH-RDGADAAQ 164
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
+ VV + P D G P L AP + PC+ALM+ F++PL +
Sbjct: 165 ADLVVLALPAPELPALFDDGGAPATLRDAIAP--------VRYAPCWALMMGFAQPLP-L 215
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
P G D ++L+WA D++KPGR
Sbjct: 216 PYDGIRIDD-DMLAWAARDNTKPGR 239
>gi|325273232|ref|ZP_08139514.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas sp.
TJI-51]
gi|324101638|gb|EGB99202.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas sp.
TJI-51]
Length = 328
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ + +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAEQWKPQLYNYRDGTLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V F + E K W + DG S G F
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFDCRIA--EVFRGKQYWHLQDTDGCSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P + PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MQGCFVQDS-ALDWLARNRSKPGR 222
>gi|398866191|ref|ZP_10621691.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM78]
gi|398241528|gb|EJN27178.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM78]
Length = 328
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTKGWVAEWTPQLYTFHGGRLDLSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I ++L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRSLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAIALAFETPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|404252978|ref|ZP_10956946.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26621]
Length = 309
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 39/208 (18%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR DG+ + FDHGA +FT + A V +W + G+VA W
Sbjct: 39 MATRRVDGPDGD-VSFDHGAQYFTARDPAFGAQVEQWAAAGIVAAWPA------------ 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VG PGMN++ KA+ ++ +G V ++ L L S
Sbjct: 86 ------AGEDAWVGTPGMNALVKAITVD--LDVTWGSKVDAIRHVDGGWL-----LGPVS 132
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+F+ V+ V +P + PL + P +A + P PC+ M+AF +
Sbjct: 133 DTRFDAVI-----VATP-----AEQAGPLLVAHDPAMAAIAQACPSAPCWTAMVAFED-- 180
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
+ + G +D+ ++ WA +S+KPGR
Sbjct: 181 -RVAIAGDIVRDNGIIGWAARNSAKPGR 207
>gi|187927513|ref|YP_001898000.1| hypothetical protein Rpic_0410 [Ralstonia pickettii 12J]
gi|309779785|ref|ZP_07674540.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|404394485|ref|ZP_10986289.1| hypothetical protein HMPREF0989_01223 [Ralstonia sp. 5_2_56FAA]
gi|187724403|gb|ACD25568.1| putative transmembrane protein [Ralstonia pickettii 12J]
gi|308921362|gb|EFP67004.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|348616457|gb|EGY65957.1| hypothetical protein HMPREF0989_01223 [Ralstonia sp. 5_2_56FAA]
Length = 332
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V + V G V W G + +Q D
Sbjct: 49 ESAPAYAFDHGAQSFNVRSEVFRRAVDAAGRQGSVLPWPARWGH-----RTIDALQADSR 103
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG+PGM ++ ++L ++ +FG V R D W++ + NG
Sbjct: 104 DEARYVGLPGMGALVRSLAAP--LDVRFGHAVTRVA--HDGRRWTI---------ERNGT 150
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI--PVN--PCFALMLAFSEPLSSI 183
A+ + F + P L F L+E PV+ PC+ALM+ F++PL +
Sbjct: 151 DAAHAD-----FLALALPAPELSALFHGATPASLQEAIAPVHYAPCWALMMGFAQPLG-L 204
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
P G D +VL+WA D+SKPGR
Sbjct: 205 PYDGIRIDD-DVLAWAARDNSKPGR 228
>gi|429335275|ref|ZP_19215912.1| hypothetical protein CSV86_25424 [Pseudomonas putida CSV86]
gi|428760077|gb|EKX82354.1| hypothetical protein CSV86_25424 [Pseudomonas putida CSV86]
Length = 328
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 35/214 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + V+ W+ G VAEWK L ++
Sbjct: 40 RMASKRSDAGALDLGAQYFTARDRRFVEQVQHWQDKGWVAEWKPQLYNY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VGVP M++I + L V F + E K+ W + D
Sbjct: 89 RDGQLTPSPDEQTRWVGVPRMSAITRGLLKD--VTVNFSCRIS--EVFRGKHYWHLQDTD 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G S G F+ V+ + V +P + PL L P LA + + + P +A+ L F
Sbjct: 145 GCSHGPFSRVIVA---VPAP-------QATPL-LAATPKLAAVVAGVQMEPTWAIALGFD 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
PL + P++G F L W + SKPGR +
Sbjct: 194 TPLDT-PMQG-CFVQGCALDWLARNRSKPGRDEH 225
>gi|254876319|ref|ZP_05249029.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842340|gb|EET20754.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 335
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT + + ++ G++ W+ N + + +N +
Sbjct: 37 RMSTRYADPYYFDHGAQYFTAKSFEFKEFLKPMIDQGIIKNWQANFVEIK--NSEIINQK 94
Query: 65 Q-DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D K YVG P MNS+ + L G++ VG ++ LW V + Q LG
Sbjct: 95 SWDNEYKHYVGSPRMNSVAQYLAQ--GLDISLNTRVGSIT--KEDRLWIVKDDNNQFLGC 150
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ ++ + + S + +D+ P + +F ++ I ++ CF+LML + + + ++
Sbjct: 151 FDWIIFA---IPSDQLKDLL----PQNTSFYN----QISSIKMDSCFSLMLGYDKEI-NL 198
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSK 225
D E++SW ++SKP R+ + + W ++
Sbjct: 199 NFDAALVHD-EIISWISLNNSKPDRNTHNCLVIHSANKWANQ 239
>gi|440716033|ref|ZP_20896552.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
gi|436438979|gb|ELP32478.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
Length = 837
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTNVGSLHQVGERWKLQIENAGGNS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFA----PDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP T DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQATSLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
E LS + G +F + LSW + +KPGR+
Sbjct: 674 GEGLSDLGYAG-AFINEGPLSWIARNDAKPGRT 705
>gi|339485730|ref|YP_004700258.1| FAD dependent oxidoreductase [Pseudomonas putida S16]
gi|338836573|gb|AEJ11378.1| FAD dependent oxidoreductase [Pseudomonas putida S16]
Length = 328
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G A+WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAAQWKPQLYNYRDGELSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P + PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD+ L W + SKPGR
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPGR 222
>gi|18396966|ref|NP_566235.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|6175169|gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana]
gi|15215628|gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana]
gi|28416461|gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis thaliana]
gi|332640593|gb|AEE74114.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 486
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ + LV W GLV EWK +G + +Y+
Sbjct: 142 LIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELEIGGSFSQFPSS--SPPRYI 199
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEW---LEDKN-LWSVSGLDGQSLGQFNGVVA 129
GM S+ +L +ES+ V + R W LE N +W +S +G GQF+ +V
Sbjct: 200 AANGMRSLADSLL----LESQM-VNLVRPCWISKLEPLNGMWHLSE-NGTPRGQFDVIVI 253
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFS 189
+ + R +G P +A +++++ ++ +AL+ AF +PL ++ +G
Sbjct: 254 AHNGKCANRLLSASG---------LPLVAKQMKKLDLSSIWALLAAFDDPLPTVNFEGAF 304
Query: 190 FQDSEVLSWAHCDSSKPG 207
+ E LSW +S+K G
Sbjct: 305 VKGVESLSWMGNNSAKLG 322
>gi|398882410|ref|ZP_10637378.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM60]
gi|398198952|gb|EJM85902.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM60]
Length = 328
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQAKGWVAEWAPQLYTYH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLIGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
VV + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 GHVVIATP---APQATAL--------LASAPKLAGAAAGVKMDPTWAVALAFETPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|299067906|emb|CBJ39120.1| putative nad/fad-dependent oxidoreductase [Ralstonia solanacearum
CMR15]
Length = 333
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R E FDHGA F V V GLV W G + ++Q
Sbjct: 45 RVLPEGAPTHAFDHGAQSFNVRTEAFRRAVDAARRQGLVMPWPARWGH-----RTADSLQ 99
Query: 65 QDGMNK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
D ++ +YVG PGM+++ ++L ++ + G V R W++ DG Q
Sbjct: 100 ADTRDEARYVGQPGMSALVRSLATP--LDVRLGHAVTRVA--PAGKGWTLH-RDGADAAQ 154
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
+ VV + P D P L AP + PC+ALM+ F+EPL +
Sbjct: 155 ADLVVLALPAPELPALFDEGDAPATLRDAIAP--------VRYAPCWALMMGFAEPL-PL 205
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
P G D ++L+WA D++KPGR
Sbjct: 206 PYDGIRIDD-DMLAWAARDNTKPGR 229
>gi|149920769|ref|ZP_01909233.1| probable deoxyribodipyrimidine photolyase [Plesiocystis pacifica
SIR-1]
gi|149818422|gb|EDM77873.1| probable deoxyribodipyrimidine photolyase [Plesiocystis pacifica
SIR-1]
Length = 343
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S DG + FDHGA +FT A+V G +A W+ L + + +
Sbjct: 47 RRASVDGLTLRFDHGAQYFTARTPAFQAVVEAGLEAGSLARWRPRLIAVEGTLAAGRSAV 106
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQ 123
+D +YVGVPGM+++ K L + GV+ R + LE W++ G+
Sbjct: 107 ED-ETPRYVGVPGMSALGKLLAARAGVDEARVHRKRRIQALERGVQGWTLVDEAGERSEG 165
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F V+ N+ S + PL AP LA + PC+A ML +P +
Sbjct: 166 FEAVL---LNLPS-------AQATPLLEAHAPALAERSRACTFEPCWAGMLRPEDPALDL 215
Query: 184 PVKGF--SFQDSEVLSWAHCDSSKPGRS 209
GF +F SW SKPGRS
Sbjct: 216 ---GFDAAFVSGGAFSWVADGGSKPGRS 240
>gi|326493132|dbj|BAJ85027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+DG ++FDH A FFT ++ LV EW GL EW+ +G + F I
Sbjct: 113 DDGRRLVFDHAAQFFTASDRRFQKLVDEWVEKGLAREWRGAIGELE-AGGHFTAIPSS-- 169
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + GQ+
Sbjct: 170 TPRYIGVRGMRPLADAMLPEDDL-----IKVVRPSWISKLEPFNGLWRLFESE-KPQGQY 223
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + + R +G P L +++ + ++ +AL+ AF +PL IP
Sbjct: 224 DAVVIAHNGKCANRLLSTSG---------LPQLTRQMKRLELSSVWALLAAFDDPL-PIP 273
Query: 185 -------VKGFSFQDSEVLSWAHCDSSK 205
+G +D + LSW ++ K
Sbjct: 274 QDNSYGTFEGAFVKDIDSLSWMANNTQK 301
>gi|224008476|ref|XP_002293197.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971323|gb|EED89658.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 440
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 27/233 (11%)
Query: 1 MSQRRETSEDGN--EMLFDHGAPF-FTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVS 57
MS R+ ++G + FDHG + F N+ + W G + +W G+
Sbjct: 84 MSTRKVMDDEGGTVKYQFDHGCQYIFPPKTNEFQQELARWRELGWIKQWNGKFGTVRGSG 143
Query: 58 KKFVNIQ-QDGM-NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG 115
+ ++ ++G+ +++YVGVP MNSIC+ + Q ++ + + ++W +
Sbjct: 144 ESVYSVVGENGVEDERYVGVPSMNSICENML-QTNIDQSKHISSNS----NNNHVWQLQN 198
Query: 116 L-DGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALML 174
+ + + L F+ +V +D+N +P +D+ R LD F + +E + C +ML
Sbjct: 199 IKNNELLDTFDWLVVTDRNSAAPHRKDL--RSADLDERFRKPINESIESL--KSC-TVML 253
Query: 175 AFSEPLSSIPVKGFSFQDSE----------VLSWAHCDSSKPGRSANRLCKDC 217
AF + L +P F + + +L W DSSKPGR + DC
Sbjct: 254 AFEKRL-PLPFDVMRFDNHDTNAMMKQNFGMLGWIARDSSKPGRQTDESEVDC 305
>gi|116052802|ref|YP_793119.1| hypothetical protein PA14_61600 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391478|ref|ZP_06880953.1| hypothetical protein PaerPAb_25129 [Pseudomonas aeruginosa PAb1]
gi|313107319|ref|ZP_07793514.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|355652215|ref|ZP_09056650.1| hypothetical protein HMPREF1030_05736 [Pseudomonas sp. 2_1_26]
gi|386063887|ref|YP_005979191.1| hypothetical protein NCGM2_0930 [Pseudomonas aeruginosa NCGM2.S1]
gi|416874238|ref|ZP_11918007.1| hypothetical protein PA15_08012 [Pseudomonas aeruginosa 152504]
gi|421170440|ref|ZP_15628393.1| hypothetical protein PABE177_5168 [Pseudomonas aeruginosa ATCC
700888]
gi|421176910|ref|ZP_15634568.1| hypothetical protein PACI27_5120 [Pseudomonas aeruginosa CI27]
gi|115588023|gb|ABJ14038.1| putative oxidoreductase [Pseudomonas aeruginosa UCBPP-PA14]
gi|310880016|gb|EFQ38610.1| putative oxidoreductase [Pseudomonas aeruginosa 39016]
gi|334843642|gb|EGM22228.1| hypothetical protein PA15_08012 [Pseudomonas aeruginosa 152504]
gi|348032446|dbj|BAK87806.1| hypothetical protein NCGM2_0930 [Pseudomonas aeruginosa NCGM2.S1]
gi|354824423|gb|EHF08674.1| hypothetical protein HMPREF1030_05736 [Pseudomonas sp. 2_1_26]
gi|404523502|gb|EKA33923.1| hypothetical protein PABE177_5168 [Pseudomonas aeruginosa ATCC
700888]
gi|404530280|gb|EKA40287.1| hypothetical protein PACI27_5120 [Pseudomonas aeruginosa CI27]
Length = 327
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
E L + PV+G F ++W C+ SKPGR
Sbjct: 194 EVLDT-PVQG-CFVHGSPIAWLACNRSKPGR 222
>gi|225463946|ref|XP_002268010.1| PREDICTED: uncharacterized protein LOC100241002 [Vitis vinifera]
Length = 467
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 23/200 (11%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV + LV W GLV +W+ +G + V +FV + +
Sbjct: 119 DPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELE-VGGQFVPLPS--LP 175
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFN 125
+Y+GV GM + ++ Q + V V R W+ +W +S +G+ GQ++
Sbjct: 176 PRYIGVNGMRPLADSILSQTTM-----VNVVRPCWISKLDPFNGMWHLSE-NGKPHGQYD 229
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV 185
+V + + +G P +A +++++ ++ +AL+ AF +PL IP
Sbjct: 230 AIVIAHNGKCANHLLASSG---------LPLVARQMKKLELSSIWALLAAFEDPL-PIPF 279
Query: 186 KGFSFQDSEVLSWAHCDSSK 205
+G + + +SW ++ K
Sbjct: 280 EGAFVKGVDSISWMANNTKK 299
>gi|296087896|emb|CBI35179.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 23/200 (11%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV + LV W GLV +W+ +G + V +FV + +
Sbjct: 119 DPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELE-VGGQFVPLPS--LP 175
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFN 125
+Y+GV GM + ++ Q + V V R W+ +W +S +G+ GQ++
Sbjct: 176 PRYIGVNGMRPLADSILSQTTM-----VNVVRPCWISKLDPFNGMWHLSE-NGKPHGQYD 229
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV 185
+V + + +G P +A +++++ ++ +AL+ AF +PL IP
Sbjct: 230 AIVIAHNGKCANHLLASSG---------LPLVARQMKKLELSSIWALLAAFEDPL-PIPF 279
Query: 186 KGFSFQDSEVLSWAHCDSSK 205
+G + + +SW ++ K
Sbjct: 280 EGAFVKGVDSISWMANNTKK 299
>gi|28868341|ref|NP_790960.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213967208|ref|ZP_03395357.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. tomato
T1]
gi|301381056|ref|ZP_07229474.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato Max13]
gi|302062195|ref|ZP_07253736.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato K40]
gi|302130075|ref|ZP_07256065.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422659488|ref|ZP_16721913.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|28851578|gb|AAO54655.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213928050|gb|EEB61596.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. tomato
T1]
gi|331018106|gb|EGH98162.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 328
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +GQ+ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDMPVSFSCRI--TEVFRGEEHWNLLDAEGQNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + T L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQAST------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKP R
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPER 222
>gi|330811709|ref|YP_004356171.1| oxidoreductase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379817|gb|AEA71167.1| Putative oxidoreductase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 328
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTNGWAAEWNPQLYNFQNGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLDK--LQVQFSCRI--TEVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
VV + +P+ + L P LA + ++P +A+ LAF PL + P
Sbjct: 152 GQVVIATP---APQATAL--------LAAVPKLAAVAAGVKMDPTWAVALAFETPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFLQDSP-LDWLARNRSKPGR 222
>gi|407792088|ref|ZP_11139161.1| FAD dependent oxidoreductase, partial [Gallaecimonas xiamenensis
3-C-1]
gi|407198253|gb|EKE68292.1| FAD dependent oxidoreductase, partial [Gallaecimonas xiamenensis
3-C-1]
Length = 177
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 100/189 (52%), Gaps = 33/189 (17%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +FT + + + W + G+ AEW V + S+ ++ Q + ++YVG
Sbjct: 11 FDLGAQYFTARHPRFIDELGNWTAQGIAAEWPV--APYHISSRGPIHAQD--VVQRYVGQ 66
Query: 76 PGMNSICKALCHQPGVESKFGVGV----GRFE--WLEDKNLWSVSGLDGQSLGQFNGVVA 129
P M++I + L ++ +F V + R E WLED+ DG++ G F+G++
Sbjct: 67 PHMSAITRYLAS--SLDVRFEVSICSCHHRDEQWWLEDQ--------DGKAHGPFDGLLV 116
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFS 189
+ V +P+ PL ++ +P LA+ ++ + PC+A+ L FS+PL++ P+K +
Sbjct: 117 T---VPAPQAA-------PL-VSASPRLAMLTRKVRMEPCWAVGLVFSQPLAT-PIKA-A 163
Query: 190 FQDSEVLSW 198
F +S+ + W
Sbjct: 164 FVESDSIQW 172
>gi|32475803|ref|NP_868797.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH 1]
gi|32446346|emb|CAD76174.1| probable deoxyribodipyrimidine photolyase [Rhodopirellula baltica
SH 1]
Length = 837
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTTVGSLHQVGERWKLQIENAGGNS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLD----LTFAPDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP L DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQAASLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
E LS + G +F + LSW + +KPGR+
Sbjct: 674 GEGLSDLGYVG-AFINEGPLSWIARNDAKPGRT 705
>gi|423699264|ref|ZP_17673754.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q8r1-96]
gi|387996823|gb|EIK58153.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q8r1-96]
Length = 328
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTNGWAAEWNPQLYNFQNGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLDK--LQVQFSCRIT--EVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
VV + +P+ + L P LA + ++P +A+ LAF PL + P
Sbjct: 152 GQVVIATP---APQATAL--------LAAVPKLAAVAAGVKMDPTWAVALAFETPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFLQDSP-LDWLARNRSKPGR 222
>gi|417302748|ref|ZP_12089836.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
gi|327540991|gb|EGF27547.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
Length = 837
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTTVGSLHQVGERWKLQIENAGGAS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLD----LTFAPDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP L DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQAASLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
E LS + G +F + LSW + +KPGR
Sbjct: 674 GEGLSDLGYAG-AFINEGPLSWIARNDAKPGR 704
>gi|15599852|ref|NP_253346.1| hypothetical protein PA4657 [Pseudomonas aeruginosa PAO1]
gi|418588039|ref|ZP_13152056.1| hypothetical protein O1O_25105 [Pseudomonas aeruginosa MPAO1/P1]
gi|418590118|ref|ZP_13154033.1| hypothetical protein O1Q_05963 [Pseudomonas aeruginosa MPAO1/P2]
gi|420141845|ref|ZP_14649484.1| hypothetical protein PACIG1_4990 [Pseudomonas aeruginosa CIG1]
gi|421156083|ref|ZP_15615537.1| hypothetical protein PABE171_4911 [Pseudomonas aeruginosa ATCC
14886]
gi|421163216|ref|ZP_15621943.1| hypothetical protein PABE173_5471 [Pseudomonas aeruginosa ATCC
25324]
gi|421519215|ref|ZP_15965887.1| hypothetical protein A161_23188 [Pseudomonas aeruginosa PAO579]
gi|9950911|gb|AAG08044.1|AE004879_10 hypothetical protein PA4657 [Pseudomonas aeruginosa PAO1]
gi|375041179|gb|EHS33892.1| hypothetical protein O1O_25105 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051069|gb|EHS43542.1| hypothetical protein O1Q_05963 [Pseudomonas aeruginosa MPAO1/P2]
gi|403245402|gb|EJY59219.1| hypothetical protein PACIG1_4990 [Pseudomonas aeruginosa CIG1]
gi|404346200|gb|EJZ72551.1| hypothetical protein A161_23188 [Pseudomonas aeruginosa PAO579]
gi|404519462|gb|EKA30214.1| hypothetical protein PABE171_4911 [Pseudomonas aeruginosa ATCC
14886]
gi|404529464|gb|EKA39500.1| hypothetical protein PABE173_5471 [Pseudomonas aeruginosa ATCC
25324]
Length = 327
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 38/234 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EWK L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWKPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL ++ F + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALL--TDLQVVFSCRI--TEVFRGKQHWHLQDSE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---IPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNI 231
E L + PV+G F ++W C+ SKPGR D + TS+ R +I
Sbjct: 194 EVLDT-PVQG-CFVHGSPIAWLACNRSKPGRDTT---LDTWVLHATSQWSRQHI 242
>gi|398974396|ref|ZP_10685023.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM25]
gi|398141598|gb|EJM30514.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM25]
Length = 328
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSKGWVAEWAPQLYTF---HGGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLL--DGLEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS L W + SKPGR D C W A
Sbjct: 200 IEGCFVQDS-ALDWLARNRSKPGR-------DTTCDTWVLHA 233
>gi|398942253|ref|ZP_10670191.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp.
GM41(2012)]
gi|398160805|gb|EJM49060.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp.
GM41(2012)]
Length = 328
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+ G VAEW L ++ +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQGNGWVAEWMPQLYTYHGGQLSLSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P+ + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVIIATP---APQATAL--------LATAPKLAGAAAGVKMDPTWAVALAFETPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|378952812|ref|YP_005210300.1| FAD dependent oxidoreductase [Pseudomonas fluorescens F113]
gi|359762826|gb|AEV64905.1| FAD dependent oxidoreductase [Pseudomonas fluorescens F113]
Length = 328
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWNPQLYNFQNGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLDK--LQVQFACRI--TEVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
VV + +P+ + L P LA + ++P +A+ LAF PL + P
Sbjct: 152 GQVVIATP---APQATAL--------LAAVPKLAAVAAGVKMDPTWAVALAFEAPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|224130614|ref|XP_002328333.1| predicted protein [Populus trichocarpa]
gi|222838048|gb|EEE76413.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 26/204 (12%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV++ LV +W GLV +W+ +G + V +F+
Sbjct: 143 DPQPLIFDHAAQFFTVSDPRFSELVDDWLEKGLVRQWQGIIGELE-VGGQFLPFPSS--T 199
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFN 125
+Y+ V GM S+ ++ Q + V V R W+ +W +S +G+ GQF+
Sbjct: 200 PRYISVNGMRSLADSILSQTCM-----VNVVRPCWISKLEPFNGMWHLSE-NGKPCGQFD 253
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL----S 181
+V + + R +G P +A +++ + ++ +AL+ AF +PL
Sbjct: 254 IIVIAHNGKCANRLLASSG---------LPLIARQMKTLGLSSIWALLAAFEDPLPIPTG 304
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSK 205
+ P +G + + LSW +S+K
Sbjct: 305 ATPFEGAFVKGVDSLSWMGNNSAK 328
>gi|152987397|ref|YP_001350638.1| hypothetical protein PSPA7_5306 [Pseudomonas aeruginosa PA7]
gi|150962555|gb|ABR84580.1| hypothetical protein PSPA7_5306 [Pseudomonas aeruginosa PA7]
Length = 327
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + L ++ W G V EW+ L +
Sbjct: 40 RMASKRSEAGTLDLGAQYFTARDRRFLDALQHWREEGWVDEWQPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DG ++VG+P M++I +AL V + E K W + +
Sbjct: 89 RDGQLSPSPDEQPRWVGIPRMSAITRALLTDLPVVFSCRI----TEVFRGKQHWHLQDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ+ G FN V+ + + +P + PL L P LA + + P +A+ L F
Sbjct: 145 GQNHGPFNQVLIA---LPAP-------QATPL-LASVPKLAATAASVVMEPTWAVALGFR 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
E L + PV+G DS + +W C+ SKPGR
Sbjct: 194 EVLDT-PVQGCFVHDSPI-AWLACNRSKPGR 222
>gi|447915123|ref|YP_007395691.1| hypothetical protein H045_00595 [Pseudomonas poae RE*1-1-14]
gi|445198986|gb|AGE24195.1| hypothetical protein H045_00595 [Pseudomonas poae RE*1-1-14]
Length = 328
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V FG + + + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPV--TFGCRITDV--FQGEQHWNLLDADGGNHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P+ + L AP L + ++P +A+ LAF +PL + P
Sbjct: 152 SHVIIATP---APQATAL--------LAAAPKLVSAAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MQGCFVQDSP-LDWLARNRSKPGR 222
>gi|104780108|ref|YP_606606.1| hypothetical protein PSEEN0884 [Pseudomonas entomophila L48]
gi|95109095|emb|CAK13792.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 328
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
D GA +FT + + V++W + G A+WK L ++ +Q ++VGV
Sbjct: 51 LDLGAQYFTARDRRFVEQVQQWVAAGWAAQWKPQLYNYRDGELTPSPDEQ----IRWVGV 106
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M++I + L V FG + E K W + +G S G F+ VV + V
Sbjct: 107 PRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPFSRVVIA---VP 159
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
+P + PL L P LA + + P +A+ L F PL + P++G QD+
Sbjct: 160 AP-------QATPL-LAATPKLAAVAAGVQMEPTWAIALGFETPLET-PMQGCFVQDNP- 209
Query: 196 LSWAHCDSSKPGR 208
L W + SKPGR
Sbjct: 210 LDWLARNRSKPGR 222
>gi|421612943|ref|ZP_16054037.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
gi|408496253|gb|EKK00818.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
Length = 837
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 LATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGM++I K L ++ + VG + ++ + G S
Sbjct: 565 --VEEKCGTPRYVGVPGMSAIGKHLAAD--LDVRLQTTVGSLHQVGERWKLQIENAGGAS 620
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLD----LTFAPDLAVKLEEIPVNPCFALMLAF 176
G A V S F V PP L DL +++ + PC+++M+
Sbjct: 621 SG------AQANEVDSGEFDRVIMNCPPAQAASLLAGHSDLEATAKQVEMLPCWSVMVR- 673
Query: 177 SEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
E LS + G +F + LSW + +KPGR
Sbjct: 674 GEGLSDLGYVG-AFINEGPLSWIARNDAKPGR 704
>gi|264678044|ref|YP_003277951.1| hypothetical protein CtCNB1_1909 [Comamonas testosteroni CNB-2]
gi|262208557|gb|ACY32655.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 353
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 92/213 (43%), Gaps = 22/213 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + D N DHG +FT + D A V WE G VA W +GS+D + F
Sbjct: 50 MSTRRRSDSDANWQC-DHGVQYFTAHDADFRAQVATWEQAGAVASWSARIGSYD--GQSF 106
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ Q +++VG P M S+ A + +S V RF+W DG
Sbjct: 107 --MLQTSAGQRFVGTPRMTSLA-AHSVRCMTDSPNPV---RFQWQSTIEPLQADTGDGWL 160
Query: 121 LGQFNGVVASDKNVVSPRFRD-VTGRPPPLDLTFAPDLAVKLEEIPVN----PCFALMLA 175
L + + S R++ + P P ++ + + N C+++M+
Sbjct: 161 LRSL------EHGIESLRYQTLLLAVPAPQAAQLLAGVSSEATTLSNNTRMRACWSVMVR 214
Query: 176 FSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
++P+ +PV G + S L W DSSKPGR
Sbjct: 215 CAQPV-PLPVDGCLVEHSP-LHWIARDSSKPGR 245
>gi|167031798|ref|YP_001667029.1| FAD dependent oxidoreductase [Pseudomonas putida GB-1]
gi|166858286|gb|ABY96693.1| FAD dependent oxidoreductase [Pseudomonas putida GB-1]
Length = 328
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P + PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQSPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD+ L W + SKPGR
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPGR 222
>gi|148546016|ref|YP_001266118.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
F1]
gi|148510074|gb|ABQ76934.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
F1]
Length = 328
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P + PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD+ L W + SKPGR
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPGR 222
>gi|395447163|ref|YP_006387416.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
ND6]
gi|397693742|ref|YP_006531622.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
DOT-T1E]
gi|388561160|gb|AFK70301.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
ND6]
gi|397330472|gb|AFO46831.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
DOT-T1E]
Length = 328
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P+ PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD+ L W + SKPGR
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPGR 222
>gi|26987478|ref|NP_742903.1| hypothetical protein PP_0742 [Pseudomonas putida KT2440]
gi|386010402|ref|YP_005928679.1| hypothetical protein PPUBIRD1_0788 [Pseudomonas putida BIRD-1]
gi|24982143|gb|AAN66367.1|AE016265_1 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|313497108|gb|ADR58474.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 328
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P+ PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFETPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSAN 211
++G QD+ L W + SKPGR +
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPGRDEH 225
>gi|393722350|ref|ZP_10342277.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26605]
Length = 311
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 82/208 (39%), Gaps = 39/208 (18%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR S G+ + FDHGA FFT + A V W ++K
Sbjct: 39 MATRRVASPCGD-VAFDHGAQFFTARDPHFAAAVTGW------------------AARKI 79
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
V + +VG P MN + KAL VE V R W LD S
Sbjct: 80 VTPWPSAGDDAWVGTPAMNVVVKALAEPLAVEWNAHVDALR----RSDGSWF---LDSVS 132
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
F+ V+ V +P + PL + P +A + P PC+ M+AF E
Sbjct: 133 DKSFDAVI-----VATP-----AEQAGPLLVAHEPAMAAMAQACPSAPCWTAMVAFGE-- 180
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
I + +D+ ++ WA +S KPGR
Sbjct: 181 -RIAIAEDIVRDAGIIGWAARNSGKPGR 207
>gi|398848331|ref|ZP_10605152.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM84]
gi|398248771|gb|EJN34172.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM84]
Length = 328
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V+ W G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQHWVEAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P + PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVVMEPTWAVALAFQTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MQGCFVQDSP-LDWLARNRSKPGR 222
>gi|421524609|ref|ZP_15971230.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
LS46]
gi|402751072|gb|EJX11585.1| NAD/FAD-dependent oxidoreductase-like protein [Pseudomonas putida
LS46]
Length = 328
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVDQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKDATV--NFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P+ PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFQAPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD+ L W + SKPGR
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPGR 222
>gi|168008463|ref|XP_001756926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691797|gb|EDQ78157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ R ++DG + FDH A +FTV++ LV W G V EWK +G + K+
Sbjct: 78 MATRDIHTKDGLSLTFDHAAQYFTVSDPKFRKLVDRWIDEGAVKEWKGVVGKL-QAGGKY 136
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKN----LWSVSGL 116
++ D +YVG GM + + + + + V R W+ + + LW ++
Sbjct: 137 SDLADD--VPRYVGTYGMRPLADHMVSRGRL-----IEVKRPVWISNMDAKGPLWHLNE- 188
Query: 117 DGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
+G+ G+F+ VV + + R +G AP++ +++ + ++ +AL+ AF
Sbjct: 189 NGKPHGEFDAVVIAHNGKCANRLLAPSG---------APEVFKQMKRLELSSIWALLAAF 239
Query: 177 SEPL 180
EPL
Sbjct: 240 EEPL 243
>gi|170723608|ref|YP_001751296.1| hypothetical protein PputW619_4447 [Pseudomonas putida W619]
gi|169761611|gb|ACA74927.1| conserved hypothetical protein [Pseudomonas putida W619]
Length = 328
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G +WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAEQWKPQLYNYRDGELTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + + V FG + E K W + +G S G F
Sbjct: 100 Q----TRWVGVPRMSAITRGMLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P + PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVVMEPTWAVALAFQTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD+ L W + SKPGR
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPGR 222
>gi|303271275|ref|XP_003054999.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462973|gb|EEH60251.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 34/209 (16%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEW-KVNLGSFDRVSKK 59
+S RR DG ++ FDH +FTV + AL +EW + GL+A W +G D S +
Sbjct: 44 LSSRRFRDNDGRDVAFDHSTQYFTVDDPRFEALAKEWAAEGLIAPWPNSAVGVLDATSGR 103
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWL---------EDKNL 110
F + D +++GV G +C+ L G V R +W+ K
Sbjct: 104 FRSF--DDATTRWIGVDGWTPLCEFLAE--GAHE-----VVRPQWVGAMTPVGGDGAKRR 154
Query: 111 WSV-SGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPC 169
W + SG G+ LG F+ V S + L L +LA K ++ ++
Sbjct: 155 WELASGPGGKPLGTFDFVAVSHNGKCA------------LRLAPTAELA-KQRKLILSSV 201
Query: 170 FALMLAFSEPLSSIPVKGFSFQDSEVLSW 198
+ALM PL + +G S+V+SW
Sbjct: 202 WALMFVVDAPL-DVAFEGAHVTGSDVVSW 229
>gi|409427047|ref|ZP_11261577.1| FAD dependent oxidoreductase [Pseudomonas sp. HYS]
Length = 328
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +++W + G AEWK L +
Sbjct: 40 RMASKRSDAGALDLGAQYFTARDRRFVDQLQQWVAAGWAAEWKPQLYHY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
QDG+ ++VGVP M++I + L V F + E + W + D
Sbjct: 89 QDGVLSPSPDEQTRWVGVPRMSAITRGLLKD--VTVNFSCRIA--EVYRGQKYWHLQDTD 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G S G F+ VV + V +P+ + L+ AP LA + ++P +A+ LAF
Sbjct: 145 GCSHGPFSRVVVA---VPAPQATQL--------LSAAPKLAATAAGVQMDPTWAIALAFD 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
PL + P++G QDS L W + SKPGR
Sbjct: 194 TPLDT-PMQGCFVQDS-ALDWLARNRSKPGR 222
>gi|423097273|ref|ZP_17085069.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q2-87]
gi|397888140|gb|EJL04623.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Q2-87]
Length = 328
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWNPQLYNFQGGQLSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL + ++ +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLGK--LQVQFSCRI--TEVYRGQEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
VV + +P+ + L P LA + ++P +A+ LAF +PL + P
Sbjct: 152 GQVVIATP---APQATAL--------LAAVPKLAGVAAGVKMDPTWAVALAFEQPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNI 231
++G QDS L W + SKPGR + D + TS+ R +I
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDST---LDTWVLHATSEWSRQHI 242
>gi|126726548|ref|ZP_01742389.1| probable deoxyribodipyrimidine photolyase [Rhodobacterales
bacterium HTCC2150]
gi|126704411|gb|EBA03503.1| probable deoxyribodipyrimidine photolyase [Rhodobacteraceae
bacterium HTCC2150]
Length = 330
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 15 LFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK---K 71
FDHGA FF+ N+ A + + G++ W F + + + I++ N
Sbjct: 48 FFDHGAQFFSAQTNEFKAFIAPMITDGIMNSWNAR---FAEIEGRAI-IRERRWNDDYPH 103
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131
YVGVPGM+SI K L + G+ K G V + + WS++ G SLG+++ V+++
Sbjct: 104 YVGVPGMSSIAKHLSN--GMNLKLGTRVQSIS--KQMSKWSLADDQGHSLGEYDWVISA- 158
Query: 132 KNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL----SSIPVKG 187
P + P L L P+++ I + CF++ML F + L S V+G
Sbjct: 159 ----IPAEQAAGLLPSSLPLY--PEVS----SIKMEGCFSMMLGFDQALPLEFDSALVRG 208
Query: 188 FSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNIKK 233
E +SW +SSK R C + TN + R++ K
Sbjct: 209 ------EDISWISVNSSKFDRKGG-FCLLVHSTNSWADTHRNDDHK 247
>gi|126727526|ref|ZP_01743359.1| probable deoxyribodipyrimidine photolyase [Rhodobacterales
bacterium HTCC2150]
gi|126703116|gb|EBA02216.1| probable deoxyribodipyrimidine photolyase [Rhodobacterales
bacterium HTCC2150]
Length = 330
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 15 LFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK---K 71
FDHGA FF+ N+ A + + G++ W F + + + I++ N
Sbjct: 48 FFDHGAQFFSAQTNEFKAFIAPMITDGIMNSWNAR---FAEIEGRAI-IRERRWNDDYPH 103
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131
YVGVPGM+SI K L + G+ K G V + + WS++ G SLG+++ V+++
Sbjct: 104 YVGVPGMSSIAKHLSN--GMNLKLGTRVQSIS--KQMSKWSLADDQGHSLGEYDWVISA- 158
Query: 132 KNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL----SSIPVKG 187
P + P L L P+++ I + CF++ML F + L S V+G
Sbjct: 159 ----IPAEQAAGLLPSSLPLY--PEVS----SIKMEGCFSMMLGFDQALPLEFDSALVRG 208
Query: 188 FSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNIKK 233
E +SW +SSK R C + TN + R++ K
Sbjct: 209 ------EDISWISVNSSKFDRKGG-FCLLVHSTNSWADTHRNDDHK 247
>gi|398969091|ref|ZP_10682704.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM30]
gi|398142785|gb|EJM31676.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM30]
Length = 328
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSLGWVAEWTPQLYTFQ---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLL--DGLEVHFACRI--TEVFRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS + W + SKPGR D C W A
Sbjct: 200 IEGCFVQDSPI-DWLARNRSKPGR-------DTTCDTWVLHA 233
>gi|431800797|ref|YP_007227700.1| FAD dependent oxidoreductase [Pseudomonas putida HB3267]
gi|430791562|gb|AGA71757.1| FAD dependent oxidoreductase [Pseudomonas putida HB3267]
Length = 328
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++W + G A+WK L ++ +
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQWVAAGWAAQWKPQLYNYRDGELSPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VGVP M++I + L V FG + E K W + +G S G +
Sbjct: 100 Q----TRWVGVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + V +P + PL L P LA + + P +A+ LAF PL + P
Sbjct: 152 SRVVIA---VPAP-------QATPL-LAATPKLAAVAAGVQMEPTWAVALAFQTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD+ L W + SKP R
Sbjct: 200 MQGCFVQDNP-LDWLARNRSKPER 222
>gi|77460953|ref|YP_350460.1| FAD dependent oxidoreductase [Pseudomonas fluorescens Pf0-1]
gi|77384956|gb|ABA76469.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 328
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSKGWVAEWAPQLYTFH---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLL--DGLEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS L W + SKPGR + C W A
Sbjct: 200 IEGCFVQDS-ALDWLARNRSKPGR-------ETTCDTWVLHA 233
>gi|241662043|ref|YP_002980403.1| hypothetical protein Rpic12D_0425 [Ralstonia pickettii 12D]
gi|240864070|gb|ACS61731.1| putative transmembrane protein [Ralstonia pickettii 12D]
Length = 355
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
E FDHGA F V + V G V W G + ++ D
Sbjct: 72 ESAPAYAFDHGAQSFNVRSEVFRRAVDAAGRQGSVLPWPARWGH-----RTVDGLEADSR 126
Query: 69 NK-KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGV 127
++ +YVG+PGM ++ ++L ++ +FG V R D W++ + NG
Sbjct: 127 DEARYVGLPGMGALVRSLAAP--LDVRFGRAVTRVT--HDGRRWTI---------ERNGT 173
Query: 128 VASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI--PVN--PCFALMLAFSEPLSSI 183
A+ + F + P L F L+E PV+ PC+ALM+ F++PL +
Sbjct: 174 DAAHAD-----FLALALPAPELPALFHGATPASLQEAIAPVHYAPCWALMMGFAQPLG-L 227
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
P G D ++L+WA D++KPGR
Sbjct: 228 PYDGIRIDD-DMLAWAARDNTKPGR 251
>gi|397603862|gb|EJK58545.1| hypothetical protein THAOC_21317 [Thalassiosira oceanica]
Length = 442
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 20/207 (9%)
Query: 6 ETSEDGNEMLFDHGAPFFTVTNNDVLA-LVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
+ + D N FDHGA F D + W G V EW N S + + +
Sbjct: 126 KVTRDLNRYQFDHGAQFIGRPKTDSFRRALNSWMKDGFVGEWTGNFASVEGSA-----LL 180
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQ 123
+ ++YVG+P +SIC+ L H ++ V R + W + G + LG
Sbjct: 181 ETEPKERYVGIPRFSSICRNLLHHKNIKV---VTQTRALARNSEIGWEIIHGKSKKELGS 237
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ +VASD+N + D L+ + L+ I M+ F PL +
Sbjct: 238 FDWLVASDRNSGARHRND-------LNDAKVDEFNSSLKNIKSVKSLVAMIVFERPL-GL 289
Query: 184 PVKGFSFQDSEV--LSWAHCDSSKPGR 208
G D L W D+SKPGR
Sbjct: 290 EFDGLQVSDESCGSLGWIARDTSKPGR 316
>gi|422638690|ref|ZP_16702121.1| amine oxidase, flavin-containing [Pseudomonas syringae Cit 7]
gi|440744572|ref|ZP_20923875.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP39023]
gi|330951085|gb|EGH51345.1| amine oxidase, flavin-containing [Pseudomonas syringae Cit 7]
gi|440373990|gb|ELQ10733.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP39023]
Length = 328
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNI 231
P++G QDS L W D SKPGR A D + TS+ R N+
Sbjct: 199 -PMQGCFVQDSP-LDWLARDRSKPGRDAT---LDTWVLHATSQWSRQNL 242
>gi|254374992|ref|ZP_04990472.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151572710|gb|EDN38364.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 333
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 100/211 (47%), Gaps = 28/211 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + + ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTNFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + Y+G+P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYE----PYIGIPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I +N CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYE----QISSIKMNGCFSLMLGYDKSIN 198
Query: 182 SIPVKGF--SFQDSEVLSWAHCDSSKPGRSA 210
GF + +++SW +SSKP R+
Sbjct: 199 L----GFDAALVHDDIISWISLNSSKPERNT 225
>gi|208780210|ref|ZP_03247552.1| hypothetical protein FTG_0352 [Francisella novicida FTG]
gi|208743859|gb|EDZ90161.1| hypothetical protein FTG_0352 [Francisella novicida FTG]
Length = 328
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 198
Query: 182 SIPVKGF--SFQDSEVLSWAHCDSSKPGRSA 210
GF + +++SW +SSKP R+
Sbjct: 199 L----GFDAALVHDDIISWVSLNSSKPERNT 225
>gi|387129739|ref|YP_006292629.1| putative deoxyribodipyrimidine photolyase [Methylophaga sp. JAM7]
gi|386271028|gb|AFJ01942.1| putative deoxyribodipyrimidine photolyase [Methylophaga sp. JAM7]
Length = 328
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQ-DGMNKKYVG 74
FDHGA FFT + + GL+A+W+ FD + K VN ++ D YVG
Sbjct: 50 FDHGAQFFTAKSASFQQFITPLLRAGLIADWQARFAEFD--AGKMVNARKWDAAFPHYVG 107
Query: 75 VPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNV 134
VP M +I +AL +E + V F +D W + G+ F+ ++ + +
Sbjct: 108 VPAMAAIGEALATDLPIEYNCQI-VSVF---QDDQKWYLVDKTGKISPPFDWLIIA---L 160
Query: 135 VSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE-PLSSIPVKGFSFQDS 193
+ + R++ P +++F D+ +I + PC+ALM++ ++ P + +
Sbjct: 161 PAEQTRELI----PTEVSFYQDML----QINMLPCYALMVSLTQDPEFECDA---ALVKN 209
Query: 194 EVLSWAHCDSSKPGR 208
LSW + +KPGR
Sbjct: 210 RKLSWISVNHTKPGR 224
>gi|387825265|ref|YP_005824736.1| hypothetical protein FN3523_1682 [Francisella cf. novicida 3523]
gi|332184731|gb|AEE26985.1| hypothetical protein FN3523_1682 [Francisella cf. novicida 3523]
Length = 327
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHG +FT + ++ G+V W+ N K + I
Sbjct: 38 RMSTRYADPYYFDHGTQYFTAKSEQFKEFLKPMIDNGIVKNWQANFVEI----KDYKIIN 93
Query: 65 Q---DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
Q D + YVG P MN++ + L V +G L+ N W V+ + L
Sbjct: 94 QKLWDNQFEHYVGTPKMNAVAQYLAQDLQVH--LNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I +N CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLSELL----PQNISFYD----QISSIKMNGCFSLMLGYDKSIN 198
Query: 182 SIPVKGF--SFQDSEVLSWAHCDSSKPGRSA 210
GF + +++SW +SSKP R+
Sbjct: 199 ----LGFDAALVHDDIISWVSLNSSKPERNT 225
>gi|118498184|ref|YP_899234.1| NAD/FAD-dependent oxidoreductase [Francisella novicida U112]
gi|118424090|gb|ABK90480.1| predicted NAD/FAD-dependent oxidoreductase [Francisella novicida
U112]
Length = 328
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 198
Query: 182 SIPVKGF--SFQDSEVLSWAHCDSSKPGRSA 210
GF + +++SW +SSKP R+
Sbjct: 199 L----GFDAALVHDDIISWVSLNSSKPERNT 225
>gi|374333917|ref|YP_005090604.1| flavin containing amine oxidoreductase-like protein [Oceanimonas
sp. GK1]
gi|372983604|gb|AEX99853.1| flavin containing amine oxidoreductase-like protein [Oceanimonas
sp. GK1]
Length = 327
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 23/205 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S ++ +DHGA FFT + AL+ + G V W+ N+ + +S +
Sbjct: 39 RMSSRRRDQQRWDHGAQFFTARSRAFKALLTPFMESGAVVAWQPNITT---LSPNQAPYK 95
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ YV P MNS+ KA+ PG+ V E D+ W + G+ LG+F
Sbjct: 96 RPWFEPHYVAAPAMNSLLKAMS--PGLNIALQTRVQSLEPQGDR--WRLLDDQGEWLGEF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V++S P P P A + PC+ALML + +P
Sbjct: 152 DWVISS--------------APLPQTRELLPLAADAYAGFGMRPCYALMLTVDD--RDLP 195
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRS 209
V + + L W + PGR+
Sbjct: 196 VWDAAKVNDSPLGWIAFNHRLPGRN 220
>gi|385793594|ref|YP_005826570.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678919|gb|AEE88048.1| Deoxyribodipyrimidine photolyase, type II [Francisella cf. novicida
Fx1]
Length = 328
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 38 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 98 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 149
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 150 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 198
Query: 182 SIPVKGF--SFQDSEVLSWAHCDSSKPGRSA 210
GF + +++SW +SSKP R+
Sbjct: 199 L----GFDAALVHDDIISWISLNSSKPERNT 225
>gi|194324366|ref|ZP_03058139.1| hypothetical protein FTE_0133 [Francisella novicida FTE]
gi|194321431|gb|EDX18916.1| hypothetical protein FTE_0133 [Francisella tularensis subsp.
novicida FTE]
Length = 332
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN---LGSFDRVSKKFV 61
R ++ + FDHGA +FT + D ++ G+V W+ N + + +++K
Sbjct: 42 RMSTRYADPYYFDHGAQYFTAKSTDFKEFLKPMIDNGIVKNWQANFVEIKDYKIINQKLW 101
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
N + + YVG P MN + + L ++ +G L+ N W V+ + L
Sbjct: 102 NNEYE----HYVGTPRMNVVAQFLAQ--DLQVYLNTRIGSVTSLD--NQWLVNDENHNPL 153
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
G+++ ++ + + S + ++ P +++F ++ I + CF+LML + + ++
Sbjct: 154 GKYDWIIFA---IPSDQLYELL----PKNISFYD----QISSIKMKGCFSLMLGYDKSIN 202
Query: 182 SIPVKGF--SFQDSEVLSWAHCDSSKPGRSA 210
GF + +++SW +SSKP R+
Sbjct: 203 L----GFDAALVHDDIISWVSLNSSKPERNT 229
>gi|87199251|ref|YP_496508.1| deoxyribodipyrimidine photolyase [Novosphingobium aromaticivorans
DSM 12444]
gi|87134932|gb|ABD25674.1| putative deoxyribodipyrimidine photolyase [Novosphingobium
aromaticivorans DSM 12444]
Length = 324
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 44/215 (20%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + G+ FDHGA +FTV + +A V W + G+ A W
Sbjct: 41 MSTRRMETPLGDAH-FDHGAQYFTVRDPAFMAQVARWSASGVAAPWPA------------ 87
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+VGVPGMN++ + + + V FG W V GL ++
Sbjct: 88 ------AGTGAWVGVPGMNAVIREMAERHDV--TFG--------------WHVRGLVNRN 125
Query: 121 LGQ-FNGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPV--NPCFALML 174
G G + + V F V PP + DL++ + PC+ M
Sbjct: 126 GGWLLTGDASGGQRVQDGPFDAVVVSIPPEQAAAIVALHDLSLASTALAARSQPCWTGMY 185
Query: 175 AFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
AF+E L P + + +++ ++SWA + +KPGR+
Sbjct: 186 AFAERL---PTRRDAVREAGLVSWAARNGAKPGRT 217
>gi|424070824|ref|ZP_17808256.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|407999907|gb|EKG40277.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe037]
Length = 328
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|393762550|ref|ZP_10351177.1| FAD dependent oxidoreductase [Alishewanella agri BL06]
gi|392606785|gb|EIW89669.1| FAD dependent oxidoreductase [Alishewanella agri BL06]
Length = 310
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TS+ D GA +FT + V+ W+ G+VA W + + + +
Sbjct: 26 RMTSKRTTHGYLDLGAQYFTAREPRFIKQVQHWQQQGVVAPWLAPVWQYQQGKLQPSPDS 85
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q +++GVP M+S K L G+ ++ + + ++ D W ++ + LG F
Sbjct: 86 Q----YRFIGVPAMHSPVKQLAM--GLNVQYQWQLTKLQY--DAAGWWLTDSQARQLGPF 137
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAP-DLAVKLEEIPVNPCFALMLAFSEPLSSI 183
+ VV S PP P +LA L + PC+A+ + P S +
Sbjct: 138 SAVVLSI--------------PPAQAAAMLPAELAASLPTASLTPCWAVNIELVAP-SGV 182
Query: 184 PVKGFSFQDSEV-LSWAHCDSSKPGR 208
P G +D + +SW +SKPGR
Sbjct: 183 PAGGIFVKDPALPVSWLSRQNSKPGR 208
>gi|424066176|ref|ZP_17803648.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
gi|408002579|gb|EKG42823.1| amine oxidase [Pseudomonas syringae pv. avellanae str. ISPaVe013]
Length = 328
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|408483905|ref|ZP_11190124.1| hypothetical protein PsR81_25249 [Pseudomonas sp. R81]
Length = 328
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + K W++ DG++ G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRIT--EVFQGKQHWNLLDADGENHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSAN 211
++G QDS L W + SKPGR +
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDTH 225
>gi|443645378|ref|ZP_21129228.1| Putative NAD/FAD-dependent oxidoreductase [Pseudomonas syringae pv.
syringae B64]
gi|443285395|gb|ELS44400.1| Putative NAD/FAD-dependent oxidoreductase [Pseudomonas syringae pv.
syringae B64]
Length = 328
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|388470441|ref|ZP_10144650.1| FAD dependent oxidoreductase [Pseudomonas synxantha BG33R]
gi|388007138|gb|EIK68404.1| FAD dependent oxidoreductase [Pseudomonas synxantha BG33R]
Length = 328
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + W++ DG+S G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRIT--EVFQGTQHWNLLDADGESHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS L W + SKPGR + T+ SKA
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDTTLDTWVLHATSAWSKA 240
>gi|418292120|ref|ZP_12904070.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379063553|gb|EHY76296.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 346
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL-GSFDRVSKKFVNI 63
R S+ + D GA +FT+ + V +W++ G V +W L S D K +
Sbjct: 59 RMASKRSDAGSLDLGAQYFTMRDRRFTETVHQWQAEGWVGQWTPTLFQSRDGQLKPSADE 118
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
Q ++VG P M++I + L + V + E + W++ G S G
Sbjct: 119 Q-----LRWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQFWTLVDATGASHGP 169
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ VV + V +P+ + L+ AP LA + + P +A+ L F+ PLS+
Sbjct: 170 FSQVVIA---VPAPQAAAL--------LSSAPKLAAVAASVAMEPTWAVALGFATPLSTT 218
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
++G QD + L W + SKPGR+ +
Sbjct: 219 -LEGCFVQD-DALDWIARNRSKPGRNGD 244
>gi|254447004|ref|ZP_05060471.1| amine oxidase, flavin-containing [gamma proteobacterium HTCC5015]
gi|198263143|gb|EDY87421.1| amine oxidase, flavin-containing [gamma proteobacterium HTCC5015]
Length = 329
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TS +E D GA +FT T+++ +A + WE LV W L + +
Sbjct: 41 RMTSIVFDEFQCDLGAQYFTATSDEFVAHMETWEDEWLVDRWHGWLVELENGQA----MT 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+D ++VG PGM++I + L V + GV + E W + +G G F
Sbjct: 97 RDDEVVRFVGRPGMDAIVEKLGELCSV--RCGVAIQTME--RSGKQWYLLDAEGHRHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+++ V L +P LA++ + V P + ++L +SEPL ++
Sbjct: 153 DAVISA-----------VPAPAARRLLAASPKLAIEAGSVEVQPNWIVVLGYSEPL-NLG 200
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
+ DS++ +W ++SKPGR
Sbjct: 201 FDAANLVDSDI-TWMANNASKPGR 223
>gi|449136587|ref|ZP_21771963.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
gi|448884760|gb|EMB15236.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
Length = 837
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR S G FDHGA +FTV ++ VR W GLV W + K
Sbjct: 510 MATRRSDSGGG----FDHGAQYFTVRDDRFARHVRSWIQQGLVEPWLQPIVELQPGGKV- 564
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+++ +YVGVPGMN+I K L V+ + V + W +
Sbjct: 565 --VEEKCGTPRYVGVPGMNAIGKHLAADLDVQLQTTV----VSLNQAGERWKL------Q 612
Query: 121 LGQFNGVVASDK--NVVSPRFRDVTGRPPPLD----LTFAPDLAVKLEEIPVNPCFALML 174
+ G +SD+ +V S F V PP L DL +++ + PC+++M+
Sbjct: 613 VENAGGSSSSDQATSVESGEFDCVIMNCPPAQAASLLAGHSDLEATAKQVEMLPCWSVMV 672
Query: 175 AFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
E LS + G +F + LSW + +KPGR
Sbjct: 673 R-GEGLSDLGFVG-AFINEGPLSWIARNDAKPGR 704
>gi|398860977|ref|ZP_10616618.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM79]
gi|398233996|gb|EJN19892.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM79]
Length = 328
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VA W L +F + +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQTNGWVAVWTPQLYTFHGGQLRPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVVIATP---APQATAL--------LATAPKLAGAAAGVKMEPTWAVALAFDTPLETA- 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 IEGCFVQDSP-LDWLARNRSKPGR 222
>gi|337754616|ref|YP_004647127.1| amine oxidase [Francisella sp. TX077308]
gi|336446221|gb|AEI35527.1| Amine oxidase, flavin-containing [Francisella sp. TX077308]
Length = 226
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT + + ++ G++ W+ N + + +N +
Sbjct: 37 RMSTRYADPYYFDHGAQYFTAKSLEFKEFLKPMIDQGIIKNWQANFVEIK--NSEIINQK 94
Query: 65 QDGMN-KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
G K YVG P MN++ + L + V ++ LW V + Q LG
Sbjct: 95 PWGNEYKHYVGSPKMNAVAQYLAQDLDISLNTRVS----SITKEDRLWIVKDNNNQFLGY 150
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ ++ + + S + +D+ P + +F ++ I ++ CF+LML + + + ++
Sbjct: 151 FDWIIFA---IPSDQLKDLL----PQNTSFYN----QISSIKMDSCFSLMLGYDKKI-NL 198
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGRSA 210
D E++SW +SSKP R+
Sbjct: 199 NFDAALVHD-EIISWISLNSSKPDRNT 224
>gi|422661581|ref|ZP_16723844.1| amine oxidase, flavin-containing, partial [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330982721|gb|EGH80824.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 246
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|226946174|ref|YP_002801247.1| FAD dependent oxidoreductase [Azotobacter vinelandii DJ]
gi|226721101|gb|ACO80272.1| FAD dependent oxidoreductase [Azotobacter vinelandii DJ]
Length = 329
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
D GA +FT + V++W G +AEW+ +L +D + Q + + +++G
Sbjct: 51 LDLGAQYFTCRDRRFAEAVQQWRDRGWIAEWQPSL--YDSANGTLRPSQDEQI--RWIGT 106
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M+++ + L V +F + E K W + DG++ G FN VV V
Sbjct: 107 PRMSALTRGLLGDMPV--RFSCRI--TEVFHGKQHWMLQDADGKAYGPFNQVV-----VA 157
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
+P + L AP LA + + + P +A+ L+F +PL + PV G QDS
Sbjct: 158 TPSPQAAQ------LLAAAPKLASSVASVAMEPNWAVALSFEQPLDT-PVDGCFIQDSP- 209
Query: 196 LSWAHCDSSKPGRSAN 211
L WA + KPGR++
Sbjct: 210 LEWASRNHGKPGRASQ 225
>gi|398985073|ref|ZP_10690900.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM24]
gi|399013268|ref|ZP_10715578.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM16]
gi|398114207|gb|EJM04039.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM16]
gi|398154676|gb|EJM43142.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM24]
Length = 328
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSQGWVAEWTPQLYTYQ---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGAPRMSAITRGLL--DGLEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFETPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 IEGCFVQDSP-LDWLARNRSKPGR 222
>gi|422620506|ref|ZP_16689184.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. japonica
str. M301072]
gi|440720036|ref|ZP_20900457.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34876]
gi|440726162|ref|ZP_20906418.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34881]
gi|330900864|gb|EGH32283.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. japonica
str. M301072]
gi|440366758|gb|ELQ03835.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34876]
gi|440366895|gb|ELQ03965.1| amine oxidase, flavin-containing [Pseudomonas syringae BRIP34881]
Length = 328
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ DG+S G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDADGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|339504108|ref|YP_004691528.1| flavin containing amine oxidoreductase-like protein [Roseobacter
litoralis Och 149]
gi|338758101|gb|AEI94565.1| flavin containing amine oxidoreductase-like protein [Roseobacter
litoralis Och 149]
Length = 323
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + FDHGA +FT D + G+V W+ L F ++
Sbjct: 41 RMSTRRADCFQFDHGAQYFTAQGEDFQRFLAPHIERGVVRAWRPRLTCFGGTIPQWTA-- 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+YVG+PGMN++CKA+ +E V E +D W + L G+ LG +
Sbjct: 99 -----PRYVGLPGMNALCKAMASD--IEVLRETRVASLERRDDH--WQLRSLAGEVLGPY 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V +S S P + P LE + C++LML F
Sbjct: 150 DWVFSSAPAEQSAALM-------PACFSHLP----ALEHARMLGCYSLMLGFDA------ 192
Query: 185 VKGFSFQDSEVL----SWAHCDSSKPGRSA--NRLCKDCNCTNWTSKAFRSNIKK 233
++ + VL +W +S+KP RS + LC+ N +W ++ K
Sbjct: 193 APDLAWDAATVLNSPMAWVAVNSTKPDRSTGFSVLCQSSN--DWAQAHIEADPDK 245
>gi|424924867|ref|ZP_18348228.1| NAD/FAD-dependent oxidoreductase [Pseudomonas fluorescens R124]
gi|404306027|gb|EJZ59989.1| NAD/FAD-dependent oxidoreductase [Pseudomonas fluorescens R124]
Length = 328
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L +F +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVTEVQRWQSEGWVAEWTPQLYTF---QGGKLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 97 PD-EQIRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVFRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS + W + SKPGR D C W A
Sbjct: 200 IEGCFVQDSPI-DWLARNRSKPGR-------DTTCDTWVLHA 233
>gi|145589835|ref|YP_001156432.1| FAD dependent oxidoreductase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048241|gb|ABP34868.1| FAD dependent oxidoreductase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 333
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ + + DHGA +FT + + V+EW + + A W L F N
Sbjct: 46 RMSTRNNDHWSGDHGAQYFTARDPLFINQVKEWINAEVAAIWNPRLKVFK------ANQW 99
Query: 65 QD--GMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD-GQSL 121
QD +YVG+P MNS K L +E F + R + ++K W + L+ G
Sbjct: 100 QDSTATENRYVGIPAMNSPGKHLAKALPIE--FNQTIDRVAYAQNK--WQLHSLESGDIH 155
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNP--CFALMLAFSEP 179
QF+ +V V P P L LT + D +++ I N C+ +M +F++
Sbjct: 156 QQFDWLV-----VALP-------APQALALTKSIDKSIEKFTIDANMQGCWTVMASFTDN 203
Query: 180 LSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
L ++P +F ++E +SW ++SKP R
Sbjct: 204 L-NLPFDA-AFINNESISWISRNNSKPKR 230
>gi|398854294|ref|ZP_10610864.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM80]
gi|398236386|gb|EJN22171.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM80]
Length = 328
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGSLDLGAQYFTARDRRFVTEVQRWQSQGWVAEWTPQLYTYQ---GGQLNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L G+E F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGAPRMSAITRGLL--DGLEVHFACRI--TEVFRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L AP LA + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVKMDPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 IEGCFVQDSP-LDWLARNRSKPGR 222
>gi|344340883|ref|ZP_08771806.1| amine oxidase [Thiocapsa marina 5811]
gi|343799128|gb|EGV17079.1| amine oxidase [Thiocapsa marina 5811]
Length = 320
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 92/222 (41%), Gaps = 35/222 (15%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T + + FDHGA + T ++ D A++++ G A W DR
Sbjct: 42 RLATRRTPDGLQFDHGAQYVTASSTDFQAVLKQARGDGAAALWNDGAQRTDR-------- 93
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
VG PGM + K L G++ + G+ V W+VS + ++
Sbjct: 94 ------PHVVGTPGMTGLAKHLGR--GLDIRRGIQVTALR--RAGRGWTVSLPEEEA--D 141
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ VV + V +P+ D+ G P+ A AV+L +PC LM AF +
Sbjct: 142 FDRVVVT---VPAPQLADLLGSDHPISREVA---AVRL-----DPCLTLMAAFDH---AA 187
Query: 184 PVKGFSFQDSE-VLSWAHCDSSKPGRSANRLCKDCNCTNWTS 224
P + D E L+W DSSKPGR A T W++
Sbjct: 188 PRPFITRTDPEHPLAWIAQDSSKPGRHAPACWVAQASTAWST 229
>gi|315500506|ref|YP_004089308.1| amine oxidase [Asticcacaulis excentricus CB 48]
gi|315418518|gb|ADU15157.1| amine oxidase [Asticcacaulis excentricus CB 48]
Length = 314
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 90/225 (40%), Gaps = 38/225 (16%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RRE +D LFDHGA +FTV + ++ V W GL A W
Sbjct: 41 MSTRRERIDDAT-YLFDHGAQYFTVRDPRFVSQVDAWTHEGLAARWP------------- 86
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
D +VG P M S ALC GV +F + + W ++ + ++
Sbjct: 87 -----DAGPDAFVGTPMMCSPLAALCEPFGV--RFATRIEGI--IGAPGAWHLTA-ENET 136
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE-P 179
G + V+ V P + + L ++APD A + PC+ M++F E P
Sbjct: 137 FGPYAQVI-----VAIPSEQAAS-----LLASWAPDFAQLALKNVSQPCWTTMVSFEEDP 186
Query: 180 LSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTS 224
PV VL+W ++SKP RS +WT+
Sbjct: 187 RDLAPVMRVQ---GPVLAWVANNASKPDRSGGSAWVLQATPDWTA 228
>gi|395794841|ref|ZP_10474157.1| hypothetical protein A462_06315 [Pseudomonas sp. Ag1]
gi|421138205|ref|ZP_15598275.1| hypothetical protein MHB_03048 [Pseudomonas fluorescens BBc6R8]
gi|395341002|gb|EJF72827.1| hypothetical protein A462_06315 [Pseudomonas sp. Ag1]
gi|404510628|gb|EKA24528.1| hypothetical protein MHB_03048 [Pseudomonas fluorescens BBc6R8]
Length = 328
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G +WK L +F S +
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQANGCAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V+ FG + E + K+ W++ DG+S G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVQ--FGCRIT--EVFQGKHHWNLLDADGESHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASVAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|66044218|ref|YP_234059.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. syringae
B728a]
gi|63254925|gb|AAY36021.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. syringae
B728a]
Length = 328
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|357116570|ref|XP_003560053.1| PREDICTED: uncharacterized protein LOC100824134 [Brachypodium
distachyon]
Length = 477
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+D +++FDH A FFT ++ LV EW GLV EW+ ++G + F I
Sbjct: 120 DDERQLVFDHAAQFFTASDERFQKLVEEWVERGLVREWRGSIGELE-AGGHFRPIHSS-- 176
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + GQ+
Sbjct: 177 TPRYIGVNGMRPLADAMLPENDL-----IKVIRPSWISKLEPFNGLWRLFE-NEKPRGQY 230
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ +V + + R +G P L +++ + ++ +AL+ AF P
Sbjct: 231 DAIVIAHNGKCANRLLSTSG---------LPQLTKQMKRLELSSVWALLAAFEGPF 277
>gi|422671623|ref|ZP_16730989.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. aceris
str. M302273]
gi|330969363|gb|EGH69429.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. aceris
str. M302273]
Length = 328
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|302185905|ref|ZP_07262578.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. syringae
642]
Length = 328
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTEGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRI--TEVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKPGR A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGRDAT 225
>gi|260802390|ref|XP_002596075.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
gi|229281329|gb|EEN52087.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
Length = 276
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 17/216 (7%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R G LFDH A +FTV++N +V + G V W +G +FV
Sbjct: 51 RTVDVGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLK--GGRFV--- 105
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ + +VG GM S+ + L V+ VG W W V G F
Sbjct: 106 KNANLQAFVGTGGMKSVPECLATLSRVQRP--AWVGNVVWEPMAKKWKV-----DKYGYF 158
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ +V + + R G P L + F P L K++++ + + L++ F L
Sbjct: 159 DYLVIAHNGKCADRLMGSAGAPKIHELLRVRFTPKLIQKVQQMQLCSLWVLLVVFPASL- 217
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDC 217
+P +G +DS+V +W +++K G+ A +C
Sbjct: 218 KLPFEGAFVEDSDV-TWVANNTAKLGQRATGDNSEC 252
>gi|307108861|gb|EFN57100.1| hypothetical protein CHLNCDRAFT_143910 [Chlorella variabilis]
Length = 409
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 90/260 (34%), Gaps = 57/260 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWK-------VNLGSFDRVS 57
R S + FD GA FFT + D + EW++ G+V EW+ G+F+ +S
Sbjct: 9 RVASRQFEALSFDTGAQFFTARSPDFRKQLEEWQASGVVQEWRGRHGRICTEDGTFELLS 68
Query: 58 KKFVNIQQDGMNKK---------------YVGVPGMNSICKALCHQ-------------- 88
YVG P N++C+ + Q
Sbjct: 69 TSSSGGSGSRGGGGGGSSGFCGSLTGLPLYVGTPTNNALCQQMARQLQEQLGAAEVQSGC 128
Query: 89 ---PGVESKFGVGVGRFEWL--EDKNLWSVSG-----LDGQSLGQFNGVVASDKNVVSPR 138
+ G G +W + + +G D Q LG F+ V+ +D + P
Sbjct: 129 IVQSVTRTSGGCGGAGMQWQLRGSRQGRAAAGEPPQPADQQDLGSFDAVILADAMPLIPG 188
Query: 139 FRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQ------- 191
L + A LA + CFALM AF +PL +P +
Sbjct: 189 SAGHVSGIDQLSTSLA-QLARSAQAAAPQACFALMAAFHQPLPGVPFDSATMDPTTTTTT 247
Query: 192 ---DSEVLSWAHCDSSKPGR 208
+ W C+SSKPGR
Sbjct: 248 SRGSAAAFQWVACNSSKPGR 267
>gi|312958867|ref|ZP_07773386.1| hypothetical protein PFWH6_0763 [Pseudomonas fluorescens WH6]
gi|311286637|gb|EFQ65199.1| hypothetical protein PFWH6_0763 [Pseudomonas fluorescens WH6]
Length = 328
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + + W++ DG G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRITDV--FQGTQHWNLLDADGGHHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + T L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVV-----IATPAPQATT------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS L W + SKPGR + T+ SKA
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDTALDTWVLHATSTWSKA 240
>gi|395500665|ref|ZP_10432244.1| hypothetical protein PPAM2_31462 [Pseudomonas sp. PAMC 25886]
Length = 328
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQAQGCAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V FG + E + K+ W++ DG++ G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVH--FGCRIT--EVFQGKHHWNLLDADGENHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|229588299|ref|YP_002870418.1| hypothetical protein PFLU0754 [Pseudomonas fluorescens SBW25]
gi|229360165|emb|CAY47022.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 328
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 21/222 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + K W++ D ++ G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRIT--EVFQGKQHWNLLDADSENHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS L W + SKPGR + T+ SKA
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDTALDTWVLHATSAWSKA 240
>gi|387891973|ref|YP_006322270.1| FAD dependent oxidoreductase [Pseudomonas fluorescens A506]
gi|387162521|gb|AFJ57720.1| FAD dependent oxidoreductase [Pseudomonas fluorescens A506]
Length = 328
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 21/222 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRIT--EVFQGTQHWNLLDADGGNHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS L W + SKPGR + T+ SKA
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDTTLDTWVLHATSAWSKA 240
>gi|408376661|ref|ZP_11174265.1| hypothetical protein QWE_03693 [Agrobacterium albertimagni AOL15]
gi|407749351|gb|EKF60863.1| hypothetical protein QWE_03693 [Agrobacterium albertimagni AOL15]
Length = 329
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 44/220 (20%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM------- 68
FDHGA +FT + A + + G + W K ++ DG+
Sbjct: 50 FDHGAQYFTARSPAFKAAAEQAVAQGHASIWP----------KAVHALKADGLVTDTRPT 99
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+Y+G+PGM+ L G++ + V R D W ++ + + LG+F+ V+
Sbjct: 100 EPRYIGLPGMSGFANGLAE--GLDIRKEATVARLAASRDD--WVLTDNEDKDLGRFDLVI 155
Query: 129 ASDKNVVSPRFRDVTGRPPPLDLTFAPDL---AVKLEEIPVNPCFALMLAFSEPLSSIPV 185
++ P P + P+ L+ + ++ CF LM+ PL+
Sbjct: 156 STA--------------PAPQTIRLMPEAFSAHAALKAVEMSGCFTLMIGLDAPLA---- 197
Query: 186 KGFSFQ--DSEVLSWAHCDSSKPGRSANRLCKDCNCTNWT 223
GF + VLSW ++SKPGRS + +W
Sbjct: 198 PGFEAARIEDHVLSWIAVEASKPGRSEKTALTIHSRNDWA 237
>gi|359782592|ref|ZP_09285812.1| amine oxidase, flavin-containing protein [Pseudomonas
psychrotolerans L19]
gi|359369412|gb|EHK69983.1| amine oxidase, flavin-containing protein [Pseudomonas
psychrotolerans L19]
Length = 328
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + + EW G AEW L + ++
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFIDALNEWRRAGCAAEWNPVLYQY---RDGRLSPS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
QD ++VGVP M++I + L V + E W + G++ G F
Sbjct: 97 QD-EQPRWVGVPRMSAITRHLLADLPVTFDCRIT----EVFRGAQHWHLLDASGETHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
VV + + +P+ + L+ P LA + + + P +++ LAF PL + P
Sbjct: 152 AQVVIA---MPAPQATAL--------LSSVPKLAATVAGVSMEPTWSVALAFPTPLQT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
V+G QDSE L W + KP R A + T+ SKA
Sbjct: 200 VEGCFVQDSE-LDWLARNRCKPERDATLDTWVLHATSAWSKA 240
>gi|392421720|ref|YP_006458324.1| amine oxidase, flavin-containing [Pseudomonas stutzeri CCUG 29243]
gi|452747420|ref|ZP_21947215.1| amine oxidase, flavin-containing [Pseudomonas stutzeri NF13]
gi|390983908|gb|AFM33901.1| amine oxidase, flavin-containing [Pseudomonas stutzeri CCUG 29243]
gi|452008536|gb|EME00774.1| amine oxidase, flavin-containing [Pseudomonas stutzeri NF13]
Length = 346
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL-GSFDRVSKKFVNI 63
R S+ + D GA +FT + VR+W+S G V +W ++ S D K +
Sbjct: 59 RMASKRSDAGSLDLGAQYFTARDRRFGETVRQWQSEGWVDQWSPSMYQSHDGQLKPSADE 118
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
Q ++VG P M+SI + L V + E + W++ G S G
Sbjct: 119 Q-----VRWVGTPTMSSITRGLLGDMPVNFSCRI----TEVFRGEQFWTLVDATGVSHGP 169
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ VV + V +P+ + L+ AP LA + + P +A+ L F+ PL+++
Sbjct: 170 FSQVVIA---VPAPQAAAL--------LSSAPKLAAVAASVAMEPTWAVALGFATPLNTM 218
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
++G +D + L W + SKPGR
Sbjct: 219 -LEGCFVRD-DALDWIARNRSKPGR 241
>gi|337279143|ref|YP_004618615.1| hypothetical protein Rta_15050 [Ramlibacter tataouinensis TTB310]
gi|334730220|gb|AEG92596.1| conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 345
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 26/218 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNND---VLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
R S D FDHGA +FTV + LAL S L W N +
Sbjct: 40 RMASRDTPFGRFDHGAQYFTVRDERFARALAL-----SPQLCRPWSANAVRVLDAHGRMA 94
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL----WSV--SG 115
+ +V VPGM+++ + QP ++ V R +E +L W + G
Sbjct: 95 EASLPAPERHWVPVPGMDALARHWA-QPLAQAGRTVLETRVARIERDSLDGRRWQLRTEG 153
Query: 116 LDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
+DG S F+G A V S + D+ + AP A +L ++ V PC+ LMLA
Sbjct: 154 MDG-SARVFSGFDAVMVAVPSRQAMDLL-----RESALAPAFAERLAQVEVAPCWTLMLA 207
Query: 176 FSEP----LSSI-PVKGFSFQDSEVLSWAHCDSSKPGR 208
F + L+++ P + ++W +SSKPGR
Sbjct: 208 FPQAVQPGLTTLGPQWNAALSTHHRIAWLSRESSKPGR 245
>gi|332187717|ref|ZP_08389452.1| hypothetical protein SUS17_2783 [Sphingomonas sp. S17]
gi|332012283|gb|EGI54353.1| hypothetical protein SUS17_2783 [Sphingomonas sp. S17]
Length = 309
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 86/226 (38%), Gaps = 37/226 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
+ S G++ FD+GA + T + LA V +WE G++A W
Sbjct: 44 KSLSAGGHDFAFDYGAQYLTARDPAFLAQVTDWEGAGIIARWPA---------------- 87
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+VGVP M +I + + V ++ + E D W + +G+ G F
Sbjct: 88 --AGEDAWVGVPSMAAIVAHMAEKQDV--RWSTHIRAVE--RDAAGWILIDDEGRE-GPF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + P + PPL + P LA + P PC+ +ML F L+
Sbjct: 141 DALV-----LAIP-----AEQVPPLIASHDPSLAERAMACPSGPCWTVMLGFETRLAVAD 190
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSN 230
+ + + WA S+KPG +W+ S+
Sbjct: 191 IADI----RDPIDWAARHSAKPGHDGGEAWTIHAAPDWSRHHLESD 232
>gi|269914628|pdb|3KKJ|A Chain A, X-Ray Structure Of P. Syringae Q888a4 Oxidoreductase At
Resolution 2.5a, Northeast Structural Genomics
Consortium Target Psr10
gi|269914629|pdb|3KKJ|B Chain B, X-Ray Structure Of P. Syringae Q888a4 Oxidoreductase At
Resolution 2.5a, Northeast Structural Genomics
Consortium Target Psr10
Length = 336
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 25/195 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYV 73
D GA +FT + V++W++ G VAEW L +F R+S ++V
Sbjct: 51 LDXGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLSPS------PDEQVRWV 104
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKN 133
G PG ++I +A V + E + W++ +GQ+ G F+ V+
Sbjct: 105 GKPGXSAITRAXRGDXPVSFSCRIT----EVFRGEEHWNLLDAEGQNHGPFSHVI----- 155
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS 193
+ +P + T L AP LA + + +P +A+ LAF PL + P +G QDS
Sbjct: 156 IATPAPQAST------LLAAAPKLASVVAGVKXDPTWAVALAFETPLQT-PXQGCFVQDS 208
Query: 194 EVLSWAHCDSSKPGR 208
L W + SKP R
Sbjct: 209 P-LDWLARNRSKPER 222
>gi|334131047|ref|ZP_08504816.1| FAD dependent oxidoreductase [Methyloversatilis universalis FAM5]
gi|333443876|gb|EGK71834.1| FAD dependent oxidoreductase [Methyloversatilis universalis FAM5]
Length = 337
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + + FDHGA F +V + + A + EW+ G++A W
Sbjct: 39 RMATRVAGRLRFDHGAQFMSVRGDAMRARLPEWQQAGVLARWPQ---------------A 83
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESK---FGVGVGRFEWLEDKNLWSVSGLDGQSL 121
G ++++V VPGMN++ + ++ +G RF W ++ G
Sbjct: 84 AVGDSERWVAVPGMNALAPRMLWGAEFSAQTLIHTLGADRFGWW-------LAEESGTLP 136
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
F+ V+ + + +P+ + R L D + +I PC+ LML+ SE L
Sbjct: 137 DCFDAVLVT---LPAPQAVTLFERSTGAGLARFID---AMRQIRYAPCWTLMLSLSERLD 190
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLC 214
F L+WA DS KP R A+R C
Sbjct: 191 V--ADCLRFPAGGALNWAARDSGKPQRDASREC 221
>gi|242086110|ref|XP_002443480.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
gi|241944173|gb|EES17318.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
Length = 507
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ ++V EW GLV EW +G + +F I +
Sbjct: 151 DGGEQLVFDHAAQFFTASDERFQSMVDEWLDRGLVREWSGLVGELE-AGGRFRAIPS--L 207
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 208 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLFE-NEKPHGEY 261
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL---- 180
+ +V + + R +G P L +++ + ++ +AL+ AF PL
Sbjct: 262 DAIVIAHNGKCANRLLSTSG---------LPLLTKQMKRLELSSVWALLAAFEAPLPVPC 312
Query: 181 --SSIPVKGFSFQDSEVLSWAHCDSSK 205
S +G +D + LSW ++ K
Sbjct: 313 IDSRGAFEGAFVRDVDSLSWMGNNTRK 339
>gi|257453814|ref|ZP_05619092.1| NAD/FAD-dependent oxidoreductase [Enhydrobacter aerosaccus SK60]
gi|257448741|gb|EEV23706.1| NAD/FAD-dependent oxidoreductase [Enhydrobacter aerosaccus SK60]
Length = 344
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDR--VSKKFVN 62
R + FDHG FT +++D V + + G++A W VN + D +S K +
Sbjct: 39 RLATRRAEPFYFDHGVAAFTASDDDFQGFVNQLLAEGVIAVWAVNQATPDNSLISTKPQS 98
Query: 63 IQQ--DGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ + D + YVG+P MN+I K L V+ V + N W + G++
Sbjct: 99 MPRVSDCYSDYYVGIPAMNAIGKHLASGLTVQRNTRVA-SIIDHHPIFNSWELLNDKGET 157
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFA-PDLAVK-LEEIPVNPCFALMLAFSE 178
LGQF+ ++++ P +FA L K L + + PC LML F
Sbjct: 158 LGQFDWIISA--------------MPVEQAKSFAQTSLHTKVLNKYALMPCSVLMLGFDT 203
Query: 179 PLS 181
PL+
Sbjct: 204 PLA 206
>gi|260802416|ref|XP_002596088.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
gi|229281342|gb|EEN52100.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
Length = 401
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 18/226 (7%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R G LFDH A +FTV++N +V + G V W +G +FV
Sbjct: 51 RTVDVGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLK--GGRFV--- 105
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ + +VG GM S+ + L V+ VG W W V G F
Sbjct: 106 KNTNLQAFVGTGGMKSVPECLATLSRVQRP--AWVGNVVWEPMAKKWKV-----DKYGYF 158
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ +V + + R G P L + F P L K++++ + + L++ F L
Sbjct: 159 DYLVIAHNGKCADRLMGSAGAPKIHELLRVRFTPKLIQKVQQMQLCSLWVLLVVFPTSL- 217
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAF 227
+P +G +DS+V +W +++K G+ A +C T ++S+ F
Sbjct: 218 KLPFEGAFVEDSDV-TWVANNTAKLGQRATGDNSEC-WTIFSSRQF 261
>gi|257094708|ref|YP_003168349.1| FAD dependent oxidoreductase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047232|gb|ACV36420.1| FAD dependent oxidoreductase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 336
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + G+ DHGA +FT + D A V W+ G+ W L FD S
Sbjct: 48 RMNTRRGDGWQCDHGAQYFTARHPDFRAEVARWQKAGVAGLWTPRLWLFDGDSPA----G 103
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSV-SGLDGQSLG 122
++ +++VG P M + + L V++ R + L + W V S G
Sbjct: 104 RESTVERFVGTPAMTAPARYLASTLTVQA-----TTRIQQLRHRAPGWQVFSAEQGWLEA 158
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
+F V+ + V +P + PL AP+LA + C+AL+L F+ P+
Sbjct: 159 RFAAVLLA---VPAP-------QAVPLLERLAPELAALAGSAVMRGCWALLLRFAAPV-D 207
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+P +F + L W ++SKPGRS
Sbjct: 208 LPFDA-AFVNHGPLRWIARNNSKPGRS 233
>gi|260802418|ref|XP_002596089.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
gi|229281343|gb|EEN52101.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
Length = 401
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 17/209 (8%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R G LFDH A +FTV++N +V + G V W +G +FV
Sbjct: 51 RTVDVGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAVKVWNGPIGVLK--GGRFV--- 105
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ + +VG GM S+ + L V+ VG W W V G F
Sbjct: 106 KNANLQAFVGTGGMKSVPECLATLSRVQRP--AWVGNVVWEPMAKKWKV-----DKYGYF 158
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ +V + + R G P L + F P L K++++ + + L++ F L
Sbjct: 159 DYLVIAHNGKCADRLMGSAGAPKIHELLRVRFTPKLIQKVQQMQLCSLWVLLVVFPTSL- 217
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSA 210
+P +G +DS+V +W +++K G+ A
Sbjct: 218 KLPFEGAFVEDSDV-TWVANNTAKLGQRA 245
>gi|339494519|ref|YP_004714812.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|338801891|gb|AEJ05723.1| amine oxidase, flavin-containing [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 359
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++GG V +W L F +
Sbjct: 72 RMASKRSDAGSLDLGAQYFTARDRRFAETVRQWQAGGWVDQWTPTL--FQSRDGQLSPSA 129
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ G S G F
Sbjct: 130 DEQL--RWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQYWTLVDATGASHGPF 183
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 184 SHVVIALPAPQA-----------AALLSGAPKLAAVAASVAMEPTWAVALGFATPLGT-A 231
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD + L W + SKPGR
Sbjct: 232 LEGCFVQD-DALDWIARNRSKPGR 254
>gi|114570835|ref|YP_757515.1| FAD dependent oxidoreductase [Maricaulis maris MCS10]
gi|114341297|gb|ABI66577.1| FAD dependent oxidoreductase [Maricaulis maris MCS10]
Length = 314
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 36/195 (18%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKY-VG 74
FDHGA + T + A + + + GL A W +Q GM + + VG
Sbjct: 50 FDHGAQYVTARDAGFAAWLDQAAATGLAAPW-----------------EQLGMEQTWWVG 92
Query: 75 VPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNV 134
PGM+ + L G+E + V +D W V+ +G+ VA +
Sbjct: 93 APGMSKLVAPLAE--GLEIRNPCRVETVG--QDGEGWLVACENGEMFQADRLAVA----I 144
Query: 135 VSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSE 194
+P+ + + L+ LA +L+ + PC+ LML+ +EPL P + + D
Sbjct: 145 PAPQAKTL--------LSGVTPLADRLDAVRYAPCWTLMLSLAEPLEQAP-RVYRASDGP 195
Query: 195 VLSWAHCDSSKPGRS 209
+W CDS+KPGRS
Sbjct: 196 C-AWIACDSTKPGRS 209
>gi|374702509|ref|ZP_09709379.1| FAD dependent oxidoreductase [Pseudomonas sp. S9]
Length = 330
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 27/207 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G ++W+ +L ++ +
Sbjct: 42 RMASKRSDAGALDLGAQYFTARDRRFVEVVQQWQARGWASQWQPSLYNYRDGELSASPDE 101
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +A+ + KF + E ++ WS+ +GQS G F
Sbjct: 102 Q----VRWVGSPRMSAITRAML--GALPVKFSCRI--TEVYRGEHHWSLQDAEGQSHGPF 153
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLT---FAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ V V P P T AP LA + ++P +A+ L+F+ PL
Sbjct: 154 SHV--------------VIAMPAPQATTLLAAAPKLAAAAASVSMDPTWAVALSFASPLD 199
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGR 208
+ V+G QDS L W +SKPGR
Sbjct: 200 T-RVEGCFVQDS-ALDWLARSTSKPGR 224
>gi|307946411|ref|ZP_07661746.1| FAD dependent oxidoreductase [Roseibium sp. TrichSKD4]
gi|307770075|gb|EFO29301.1| FAD dependent oxidoreductase [Roseibium sp. TrichSKD4]
Length = 319
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 40/207 (19%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T N++ FDHGA + T + L+ E + +EW + DR
Sbjct: 42 RLATRRAENDLQFDHGAQYITAKTDGFQRLLAELTANCAASEWHMG----DRTG------ 91
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
VG P MN++ KAL + + V +E + WSVS DG +
Sbjct: 92 --------VVGTPSMNALAKALADGLTIRRQTQV----TSVMETGSTWSVSTGDGTL--E 137
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ ++ + +P+ + G P L+ ++ + + PC+ LM+AF +
Sbjct: 138 FDRLIIT---APAPQTMALLGNDHP--------LSKQIAHVSLLPCWTLMVAFDK----A 182
Query: 184 PVKGFSFQDSEV-LSWAHCDSSKPGRS 209
P ++ D + L+W +S+KPGR+
Sbjct: 183 PALAATYHDPDAPLAWIAQESTKPGRA 209
>gi|242037905|ref|XP_002466347.1| hypothetical protein SORBIDRAFT_01g006160 [Sorghum bicolor]
gi|241920201|gb|EER93345.1| hypothetical protein SORBIDRAFT_01g006160 [Sorghum bicolor]
Length = 160
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 173 MLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
M+AFSEPL+ +PV GFSF +S LSWA C+SSKPGR+
Sbjct: 1 MVAFSEPLAMVPVHGFSFNNSNSLSWAFCNSSKPGRA 37
>gi|421506151|ref|ZP_15953082.1| FAD dependent oxidoreductase [Pseudomonas mendocina DLHK]
gi|400343101|gb|EJO91480.1| FAD dependent oxidoreductase [Pseudomonas mendocina DLHK]
Length = 328
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G W L ++ + +
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQNRGWAEPWAPEL--YNSQAGQLSPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V + E + WS+ DG S G F
Sbjct: 98 DEQV--RWVGAPRMSAISRALLGALPVHFSCRI----TEVFRGGSHWSLQDTDGNSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVIVATP---APQASAL--------LACAPKLAGVAASVVMEPTWAVALAFDTPLDT-R 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
V+G QDS L W + SKPGR
Sbjct: 200 VEGCFIQDSP-LDWVARNRSKPGR 222
>gi|429212761|ref|ZP_19203926.1| putative oxidoreductase [Pseudomonas sp. M1]
gi|428157243|gb|EKX03791.1| putative oxidoreductase [Pseudomonas sp. M1]
Length = 327
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 38/236 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + L ++ W G VAEW L +
Sbjct: 40 RMASKRSDAGALDLGAQYFTARDRRFLDAIQHWRDAGWVAEWDPALYQY----------- 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
+DGM ++VG P M++I +AL G++ F + E + W + +
Sbjct: 89 RDGMLSPSPDEQPRWVGTPRMSAITRALLQ--GLQVTFSCRI--TEVFRGQQHWHLQDSE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G + G F+ V+ + + + LA I + P +A+ L F+
Sbjct: 145 GCNHGPFSHVLVATPAPQAAALLAGAPK-----------LAAAAASIAMEPTWAVALGFA 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNIKK 233
EPL + PV+G Q+ L+W + KPGR + D + +S R NI K
Sbjct: 194 EPLQT-PVQGCFVQEGP-LTWMASNRCKPGRDEH---MDTWVLHASSSWSRQNIDK 244
>gi|146282856|ref|YP_001173009.1| amine oxidase, flavin-containing [Pseudomonas stutzeri A1501]
gi|145571061|gb|ABP80167.1| amine oxidase, flavin-containing [Pseudomonas stutzeri A1501]
Length = 328
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++GG V +W L F +
Sbjct: 41 RMASKRSDAGSLDLGAQYFTARDRRFAETVRQWQAGGWVDQWTPTL--FQSRDGQLSPSA 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ G S G F
Sbjct: 99 DEQL--RWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQYWTLVDATGASHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 153 SHVIIALPAPQA-----------AALLSGAPKLAAVAASVAMEPTWAVALGFATPLGTT- 200
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD + L W + SKPGR
Sbjct: 201 LEGCFVQD-DALDWIARNRSKPGR 223
>gi|146306109|ref|YP_001186574.1| FAD dependent oxidoreductase [Pseudomonas mendocina ymp]
gi|145574310|gb|ABP83842.1| FAD dependent oxidoreductase [Pseudomonas mendocina ymp]
Length = 328
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G W L ++ + +
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQNRGWAEPWAPEL--YNSQAGQLSPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V + E + WS+ DG S G F
Sbjct: 98 DEQV--RWVGAPRMSAISRALLGALPVHFSCRI----TEVFRGGSHWSLQDADGNSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P+ + L AP LA + + P +A+ LAF PL +
Sbjct: 152 SHVIVATP---APQASAL--------LACAPKLAGVAASVVMEPTWAVALAFDTPLDT-R 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
V+G QDS L W + SKPGR
Sbjct: 200 VEGCFIQDSP-LDWVARNRSKPGR 222
>gi|383645219|ref|ZP_09957625.1| deoxyribodipyrimidine photolyase [Sphingomonas elodea ATCC 31461]
Length = 315
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 84/208 (40%), Gaps = 37/208 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR DG ++ FDHGA +FTV ++ V++W++ G+ + W
Sbjct: 39 MSTRR-VELDGEQLQFDHGAQYFTVRDDRFRRQVQDWQTQGVASPW-------------- 83
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
Q+ +VG P MN+ + + V + V D W V +GQ
Sbjct: 84 ----QEAGPDAWVGTPAMNAPVRRMAETHRVHFRHHV----VALTRDIAGWHVRLQEGQH 135
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
G ++ + + + F DL A D + PC+ M+AF
Sbjct: 136 -GPYDAAIVALPAEQAAAFLGSH------DLMMAADAMAARSQ----PCWTAMMAFE--- 181
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
+ +P+ S + ++ WA D +KPGR
Sbjct: 182 NRVPIAADSIRQHGIIGWAARDGAKPGR 209
>gi|388547194|ref|ZP_10150462.1| FAD dependent oxidoreductase [Pseudomonas sp. M47T1]
gi|388274769|gb|EIK94363.1| FAD dependent oxidoreductase [Pseudomonas sp. M47T1]
Length = 328
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G V EWK L F+ S+ V
Sbjct: 40 RASSKRSDAGSLDLGAQYFTARDRRFVDQVQRWQTSGCVEEWKPQL--FN--SQGGVLSP 95
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++VG P M +I KA+ + + FG + E K+ W + +G S G F
Sbjct: 96 SPDEQTRWVGTPRMGAIAKAMLGD--MNAVFGCRI--TEVFRGKHHWHLLDAEGCSHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + + + + + + + P +A+ LAF +PL +
Sbjct: 152 SHVIIALPAPQATALLAAAPKLAGVAAS-----------VQMEPTWAIALAFDKPLDTA- 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W C+ SKPGR
Sbjct: 200 MQGCFVQDSP-LDWLACNRSKPGR 222
>gi|423689842|ref|ZP_17664362.1| FAD dependent oxidoreductase [Pseudomonas fluorescens SS101]
gi|388000846|gb|EIK62175.1| FAD dependent oxidoreductase [Pseudomonas fluorescens SS101]
Length = 328
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL VE FG + E + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPVE--FGCRIT--EVFQGTQHWNLLDADGGNHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P + + LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWTIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKA 226
++G QDS L W + SKPGR + T+ SKA
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDTTLDTWVLHATSAWSKA 240
>gi|387906122|ref|YP_006336459.1| FAD dependent oxidoreductase [Burkholderia sp. KJ006]
gi|387581014|gb|AFJ89728.1| FAD dependent oxidoreductase [Burkholderia sp. KJ006]
Length = 348
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 23/195 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGAP+FT + +A V W + G A W+ + S + + + +YVGVP
Sbjct: 58 DHGAPYFTAQHPAFVAEVARWVASGAAAPWEARVASIGSLGPRALLAPA----LRYVGVP 113
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM++ + L G+ + + E + D + W + + L + V V
Sbjct: 114 GMSAPARRL--SAGIRTLCETAI--VELIRDGDCWRATSAEHGVLDAHHDAVI----VAV 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF--SFQDSE 194
P + V PL P LAV + + + +M +P GF +F +S
Sbjct: 166 PAPQAV-----PLLRHAEPSLAVIAQRSEMRATWTVM----AQCRGLPDPGFDAAFVNSG 216
Query: 195 VLSWAHCDSSKPGRS 209
L W D+SKPGR+
Sbjct: 217 PLGWIANDTSKPGRA 231
>gi|399002470|ref|ZP_10705156.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM18]
gi|398124910|gb|EJM14406.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM18]
Length = 328
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VA W L ++ + +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWVAVWTPQLYTYHGGQLRPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I +AL +E +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRALLGD--LEVQFSCRIT--EVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P+ + L AP LA + + P +A+ LAF PL + P
Sbjct: 152 SHVVIATP---APQATAL--------LPAAPKLAGAAAGVKMEPTWAVALAFDTPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 IEGCFVQDSP-LDWLARNRSKPGR 222
>gi|351729485|ref|ZP_08947176.1| FAD dependent oxidoreductase [Acidovorax radicis N35]
Length = 333
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 26/237 (10%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR E G DHGA +FT + A V W+ G+ A W L SFD
Sbjct: 45 MSTRRAEDEHGAWQC-DHGAQYFTARDPAFRAEVARWQRAGVAAVWNARLASFD----GS 99
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ K++VG P M S L V+S + R++ +V GLD ++
Sbjct: 100 IWTTPHTPLKRFVGTPRMTSPAAWL-----VQSLGDRALARWQ-------TTVQGLD-RT 146
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPP-----PLDLTFAPDLAVKLEEIPVNPCFALMLA 175
G + + +++ + R+ V P PL AP A + +A+ML
Sbjct: 147 EGGWT-ITSAEHGPLHQRYDAVMLAVPAPQAVPLLAPVAPAGAAVAASARMRGSWAVMLR 205
Query: 176 FSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNIK 232
++ P+ ++P +G +F ++ L W DSSKPGR+ W+ N +
Sbjct: 206 YAAPV-AMPWEG-AFINTGPLRWVARDSSKPGRTGAETWLLHATAEWSDAHIEGNAE 260
>gi|220934065|ref|YP_002512964.1| transmembrane protein [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995375|gb|ACL71977.1| putative transmembrane protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 329
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +FTV + + V W SG V W+ + DR F++ + ++YV
Sbjct: 55 FDAGAQYFTVRDPVFRSYVDTWLSGQRVMPWRGWVVELDR--GDFISRES---AERYVAQ 109
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M ++ + L V V R + ++ LW + G L + +V + +
Sbjct: 110 PSMGALVRHLAEFCDVREH--QAVARADRVD--GLWRLRDGRGVELARCRELVLA---LP 162
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
+P D+ G AP ++ +L C+A+ML F EPL +P ++ +
Sbjct: 163 APMALDILG-------DAAPQVSTRLAHFETTSCWAVMLGFDEPL-PVPFDA-AYVNQSP 213
Query: 196 LSWAHCDSSKPGR 208
L+W ++SKPGR
Sbjct: 214 LAWVARNNSKPGR 226
>gi|121605824|ref|YP_983153.1| FAD dependent oxidoreductase [Polaromonas naphthalenivorans CJ2]
gi|120594793|gb|ABM38232.1| FAD dependent oxidoreductase [Polaromonas naphthalenivorans CJ2]
Length = 383
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
RET G FDHG +FTV + + + GLV W N + V
Sbjct: 84 RETEFGG----FDHGTQYFTVRDERFEEALTT--ATGLVRPWSANTVRVLDDLGRVVAAS 137
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL----WSVSGLDGQS 120
+V PGMN++ + QP +++ V R ++E+ L W + DG
Sbjct: 138 LPAREAHWVAKPGMNALLRQWA-QPLLDAGHLVPDTRVVYIEEDKLEPQRWQLQ-TDGPG 195
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP- 179
G +G A + +P+ R++ D A L L + + PC+ LM+AF +
Sbjct: 196 AGVHSGFDAVVLTIPAPQARELLD-----DSEVAAPLLADLAGVSIAPCWTLMVAFPQAQ 250
Query: 180 ---LSSI-PVKGFSFQDSEVLSWAHCDSSKPGR 208
L+S+ P + ++W +SSKPGR
Sbjct: 251 QPTLASLGPQWNVARSTHHRIAWLARESSKPGR 283
>gi|302754734|ref|XP_002960791.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
gi|300171730|gb|EFJ38330.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
Length = 434
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 32/215 (14%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M R DG ++FDH A +FTV + LV +W S G V EW +G +F
Sbjct: 73 MGTRDIVHRDGKRLVFDHAAQYFTVKDPMFQKLVDQWLSEGAVKEWDGVVGMLR--EGEF 130
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLE----DKNLWSVSGL 116
+ + KYV GM + + + + + + W+ D W++
Sbjct: 131 SPLPH---SVKYVATHGMRLLADHMVSKARL-----ITIQHPCWISSMEVDNGTWNLKEN 182
Query: 117 D-GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
D GQ GQF+ VV + + R +G AP +A +++ + ++ +AL+ A
Sbjct: 183 DLGQ--GQFDAVVIAHNGKCANRLLGPSG---------APLVAKQMKRLELSSVWALLAA 231
Query: 176 FSEPLSSIPVKGFSFQDSEV-----LSWAHCDSSK 205
F EPL + P G + V LSW +S K
Sbjct: 232 FDEPLPA-PADGSKLDGAFVEGINSLSWMGNNSQK 265
>gi|329901867|ref|ZP_08272954.1| putative deoxyribodipyrimidine photolyase [Oxalobacteraceae
bacterium IMCC9480]
gi|327548959|gb|EGF33576.1| putative deoxyribodipyrimidine photolyase [Oxalobacteraceae
bacterium IMCC9480]
Length = 330
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 22/196 (11%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FDHGA +FT +++ V W G VA W+ + D + ++VGV
Sbjct: 49 FDHGAQYFTASSDTFKKDVASWTKAGWVAPWQGKFVALDHGTATVAGKS----GSRHVGV 104
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQSLGQFNGVVASDK 132
PGM S+ L G++ + G V E ++ L +V S G F+ V+ +
Sbjct: 105 PGMRSVGVHLAQ--GLDVRTGQRVDHIEAHGEQWLLAVHCDTVPVAASAGPFDAVIVA-- 160
Query: 133 NVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQD 192
V L P A ++ + PC+ LM AF + L + G +
Sbjct: 161 ---------VPADQATALLEVVPAFAKAAKKAFLVPCWTLMAAFQDSL-ELGYDGAWVNN 210
Query: 193 SEVLSWAHCDSSKPGR 208
S LSW D+SKPGR
Sbjct: 211 SR-LSWLAHDASKPGR 225
>gi|302804250|ref|XP_002983877.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
gi|300148229|gb|EFJ14889.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
Length = 434
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 32/215 (14%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M R DG ++FDH A +FTV + LV +W S G V EW +G +F
Sbjct: 73 MGTRDIVHRDGKRLVFDHAAQYFTVKDPMFQKLVDQWLSEGAVKEWDGVVGMLR--EGEF 130
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLE----DKNLWSVSGL 116
+ + KYV GM + + + + + + W+ D W++
Sbjct: 131 SPLPH---SVKYVATHGMRLLADHMVSKARL-----ITIQHPCWISSMEVDNGTWNLKEN 182
Query: 117 D-GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
D GQ GQF+ VV + + R +G AP +A +++ + ++ +AL+ A
Sbjct: 183 DLGQ--GQFDAVVIAHNGKCANRLLGPSG---------APLVAKQMKRLELSSVWALLAA 231
Query: 176 FSEPLSSIPVKGFSFQDSEV-----LSWAHCDSSK 205
F EPL + P G + V LSW +S K
Sbjct: 232 FDEPLPA-PADGSKLDGAFVEGINSLSWMGNNSQK 265
>gi|383767232|ref|YP_005446213.1| putative oxidoreductase [Phycisphaera mikurensis NBRC 102666]
gi|381387500|dbj|BAM04316.1| putative oxidoreductase [Phycisphaera mikurensis NBRC 102666]
Length = 391
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 83/235 (35%), Gaps = 41/235 (17%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL------GSFDRVS 57
R T + FDHG+P FT + V W G+V W G D+ +
Sbjct: 51 RASTRRSRTGVAFDHGSPCFTAHSEAFAERVAGWREAGVVGPWTGRFLRADPGGERDQAA 110
Query: 58 KKFVNIQQDG--------MNKKYVGVPGMNSICKALCH---QPGVESKFGVGVGRFEWLE 106
DG +++VGVP M ++ L + ES+ +G
Sbjct: 111 AAGDPAVADGPAVRWRPDPRERFVGVPSMAALVGHLLEGAAEAHAESEIVELLGEPAGRG 170
Query: 107 DKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPV 166
W + GQ G F+ VV + + R + AP LA E
Sbjct: 171 SAGPWLLKDAAGQEHGPFDAVVVAVAAPQAARLLGAS----------APRLARLAERAKA 220
Query: 167 NPCFALMLAFSEPLSSIPVKGFSFQDSEV-------------LSWAHCDSSKPGR 208
CF++MLAF EPL P G D E L+W ++ KPGR
Sbjct: 221 AGCFSVMLAFDEPLGLAPAAG-DVADGEAPAAVDAVRLDRGPLAWVGRETHKPGR 274
>gi|88798548|ref|ZP_01114132.1| FAD dependent oxidoreductase [Reinekea blandensis MED297]
gi|88778648|gb|EAR09839.1| FAD dependent oxidoreductase [Reinekea sp. MED297]
Length = 326
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 27/207 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ ++ DHG +FT + A V W+ G ++ W V R + +
Sbjct: 39 RLSTRRRDDWQVDHGTQYFTARSEQFKAEVDRWQQKGWISVWPVTPWKLGRETL----VP 94
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+YVG P MN++ L G+E + R E ++ W + G+ GQF
Sbjct: 95 SPDEQIRYVGSPTMNAMIHGLS--DGLEFYTRTRIDRLERVDGG--WRLWDEHGEQYGQF 150
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKL---EEIPVNPCFALMLAFSEPLS 181
+ V+ + P L P+ + L + ++P +A +A +P S
Sbjct: 151 DAVLIT--------------APLAQSLALLPENSAALPAMKHARMSPTWATAIALDQP-S 195
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGR 208
I F + +++WA DSSKPGR
Sbjct: 196 GIEADAL-FANDGIVTWACRDSSKPGR 221
>gi|339051146|ref|ZP_08647917.1| Deoxyribodipyrimidine photolyase2C type II [gamma proteobacterium
IMCC2047]
gi|330721651|gb|EGG99664.1| Deoxyribodipyrimidine photolyase2C type II [gamma proteobacterium
IMCC2047]
Length = 349
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 80/209 (38%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEW--KVNLGSFDRVSKKFVN 62
R ++ FDHGA FFT + ++ + G V W +V + D +
Sbjct: 46 RMSTRYAQHYQFDHGAQFFTARSKSFNTFLKPLLADGTVQPWQPRVLTLALDEQGRAKKP 105
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++D YV P MN + K L + + + + + + W + + G G
Sbjct: 106 YKRDWFEPHYVAAPKMNHLAKVLAKERDIHLETQLSGLK----KTVGGWVLEDIQGHQHG 161
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDL---AVKLEEIPVNPCFALMLAFSEP 179
F+ VV++ P P P + + C+ LML SEP
Sbjct: 162 VFDWVVST--------------APAPQTAALLPQTFSGYADIRHTNMEGCYCLMLGLSEP 207
Query: 180 LSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
L + + +DS ++W DSSKPGR
Sbjct: 208 L-DVNWQAAVAKDS-CIAWIAVDSSKPGR 234
>gi|422631803|ref|ZP_16696983.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330941664|gb|EGH44440.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 328
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 25/209 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
P++G QDS L W + SKP R A
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPQRDAT 225
>gi|160899735|ref|YP_001565317.1| FAD dependent oxidoreductase [Delftia acidovorans SPH-1]
gi|160365319|gb|ABX36932.1| FAD dependent oxidoreductase [Delftia acidovorans SPH-1]
Length = 339
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 29/216 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR G DHGAP F + + + VR+WE G+VA W+ R+ K
Sbjct: 30 MSTRRAQDPQGAWQC-DHGAPSFAAQDPEFVQEVRQWEQHGVVAAWRPR---AVRLQGKD 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
V + D ++VGVP M S L Q G ++ + + + W+V +
Sbjct: 86 V-VPADAGPDRWVGVPRMTSPAAFLVQRLAQQGHGARLHLQATVQQLQYESACWTVHCAE 144
Query: 118 -GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
GQ ++ +V + V +P+ + G P +A LA + PC+ ML
Sbjct: 145 HGQIGSEYCALVLA---VPAPQAAALLGPVSP----YASALAASAR---MQPCWVAMLRT 194
Query: 177 SEPLSSIPVKGFSFQDSEV----LSWAHCDSSKPGR 208
PL + +E+ L W DS+KPGR
Sbjct: 195 DAPLP------LDWDAAEITDGPLCWVASDSAKPGR 224
>gi|440739056|ref|ZP_20918578.1| hypothetical protein A986_12259 [Pseudomonas fluorescens BRIP34879]
gi|440380428|gb|ELQ16995.1| hypothetical protein A986_12259 [Pseudomonas fluorescens BRIP34879]
Length = 328
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W+S G +WK L +F S +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVNEVQRWQSNGWAEQWKPQLYNFK--SGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I +AL V FG + + + W++ DG + G F
Sbjct: 98 DEQI--RWVGTPRMSAITRALLDDLPV--TFGCRITDV--FQGEQHWNLLDADGGNHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF +PL + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAIALAFDKPLDT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MQGCFVQDSP-LDWLARNRSKPGR 222
>gi|237799746|ref|ZP_04588207.1| amine oxidase, flavin-containing protein, partial [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022601|gb|EGI02658.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 281
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +G++ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDLPVSFSCRIA--EVFRGEEHWNLLDAEGKNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQASA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKPGR
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGR 222
>gi|325926986|ref|ZP_08188261.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas perforans
91-118]
gi|325542645|gb|EGD14112.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas perforans
91-118]
Length = 344
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + Q M +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD--GTQLRRSQHALM--RYVGVP 120
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W +S + F+ V+ + V +
Sbjct: 121 EMTAPARTLAAQLDVRLSAEVRALR----RSRQGWRLSVSQAAAEHLFDTVLLA---VPA 173
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P+ P F ++ L
Sbjct: 174 PSAAGLLAQAAPALATIA-------EQVRMQPAWAVMAHFDAPID--PGYDALFVNAGAL 224
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 225 RWVARNSSKPARA 237
>gi|384245352|gb|EIE18846.1| hypothetical protein COCSUDRAFT_45008 [Coccomyxa subellipsoidea
C-169]
Length = 270
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKN--LWSVSGLDGQSLGQFNGVVA 129
YVGVP M+++C+ L P + S +G V LED L V+G + + +G V
Sbjct: 7 YVGVPSMDAVCQGLAANPNLRSHWGSKVKGIRRLEDGTWKLQYVTGSEDAAATATHGAVL 66
Query: 130 SDKNVVSPRFRDVTGRPPPLDL--TFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
++++ R + P L L A + ++ + +P F+LM+ + P G
Sbjct: 67 L-ADIMTMR----SSSPGSLQLGGAEASPMVQQMGTVTASPVFSLMVCLDSRAVNAPFDG 121
Query: 188 FSFQDSEVLSWAHCDSSKPGR 208
+ S+ + W DSSKPGR
Sbjct: 122 ATVTGSDGIQWVARDSSKPGR 142
>gi|255580905|ref|XP_002531271.1| conserved hypothetical protein [Ricinus communis]
gi|223529104|gb|EEF31084.1| conserved hypothetical protein [Ricinus communis]
Length = 467
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV++ LV W GL+ +W+ +G +++ G +
Sbjct: 136 DPQPLVFDHAAQFFTVSDPQFAQLVDGWLEKGLIRQWQGTIG----------ELEKGGHS 185
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
Y G L VE + R E +W +S +G+ GQF+ +V
Sbjct: 186 LTYSG---------CLLQTSMVEVVRPCWISRLEPF--NGMWHLSE-NGKPCGQFDVIVI 233
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL----SSIPV 185
+ + R +G P +A +++++ ++P +AL+ AF EPL + P
Sbjct: 234 AHNGKCANRLLASSG---------LPLIARQMKKLDLSPIWALLAAFEEPLPIPSGASPF 284
Query: 186 KGFSFQDSEVLSWAHCDSSK 205
+G + + +SW +S K
Sbjct: 285 EGAFVKGVDSISWMGNNSMK 304
>gi|346724228|ref|YP_004850897.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346648975|gb|AEO41599.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 344
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTQLR----RSQSALMRYVGVP 120
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W +S + F+ V+ + V +
Sbjct: 121 EMTAPARTLAAQLDVRLSAEVRALR----RSRQGWRLSVSQAAAEHLFDTVLLA---VPA 173
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P+ P F ++ L
Sbjct: 174 PSAAGLLAQAAPALATIA-------EQVRMQPAWAVMAHFDAPID--PGYDALFVNAGAL 224
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 225 RWVARNSSKPARA 237
>gi|163758919|ref|ZP_02166006.1| FAD dependent oxidoreductase [Hoeflea phototrophica DFL-43]
gi|162284209|gb|EDQ34493.1| FAD dependent oxidoreductase [Hoeflea phototrophica DFL-43]
Length = 321
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR S+ GN FDHGA +FT + ALV + G +A W+
Sbjct: 42 MSTRR--SDYGN---FDHGAQYFTSRTPEFTALVNQLVENGDIAPWQPK----------- 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+D +VG PGM+++ KAL G++ +F V ++D + D S
Sbjct: 86 ---GKDSTWPWWVGQPGMSAMGKALAG--GLDIRFQAQVSGINRIDDGYSVEIEAADNAS 140
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+++ + V + PLD F +E++ + PC+A M+AF
Sbjct: 141 -----NAISAARVVAAIPAPQAASLLVPLDPAF-----TAIEQVVMAPCWAAMVAFDTSP 190
Query: 181 SSIP--VKGFSFQDSEVLSWAHCDSSKPGR 208
+++P ++G ++ L+ +SSKPGR
Sbjct: 191 AAVPDILRG---DPADPLALIARNSSKPGR 217
>gi|284039538|ref|YP_003389468.1| FAD dependent oxidoreductase [Spirosoma linguale DSM 74]
gi|283818831|gb|ADB40669.1| FAD dependent oxidoreductase [Spirosoma linguale DSM 74]
Length = 323
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGS-FDRVSKKFVNIQQDGMNKKYVGV 75
DHGA +F+ T ++ LV+E + ++ EWK S D V KK YVGV
Sbjct: 51 DHGAQYFSATTPELQELVQELLADKVITEWKPTQPSPADTVFKK----------PHYVGV 100
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF--NGVVASDKN 133
GMN++ KAL V + V R E +N W V + +S GQ+ + ++ +
Sbjct: 101 EGMNAVAKALSKDLTVRTAETVISFRVE----ENQWLV---ETESGGQYRADALLITIPA 153
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS 193
+ + +G P + D +V L I PC A+M+A ++P S +P G ++
Sbjct: 154 PQALALIEKSGFP-----IVSADKSV-LSAIRYQPCIAVMVALNKP-SLLPAPGAVRYET 206
Query: 194 EVLSWAHCDSSK 205
++W ++ K
Sbjct: 207 SDIAWVADNAQK 218
>gi|108862915|gb|ABG22072.1| expressed protein [Oryza sativa Japonica Group]
Length = 456
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 104 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 161
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 162 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 215
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP----- 184
+ + R +G P L +++ + ++ +AL+ AF +PL IP
Sbjct: 216 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL-PIPQTDSY 265
Query: 185 --VKGFSFQDSEVLSWAHCDSSK 205
+G +D + LSW ++ K
Sbjct: 266 GTFEGAFVKDVDSLSWMANNTQK 288
>gi|402699635|ref|ZP_10847614.1| FAD dependent oxidoreductase [Pseudomonas fragi A22]
Length = 328
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V++W++ G AEW+ +L ++ + +
Sbjct: 40 RMSSKRSDAGSLDLGAQYFTARDRRFVDEVQQWQALGWAAEWEPHL--YNHKNGQLTPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VG P M++I + + V F + + + W + D S G +
Sbjct: 98 DE--QTRWVGSPRMSAITRGMLGHFKV--NFACRITDL--IRGEKHWHLLDADEVSHGPY 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P+ + L AP LA + ++P +A+ LAF PL +
Sbjct: 152 SHVIVA---TPAPQATAL--------LACAPKLASTAAGVKMDPTWAVALAFDTPLET-K 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
+ G QDS L W +SSKPGR
Sbjct: 200 MDGCFVQDSP-LDWLARNSSKPGR 222
>gi|222617407|gb|EEE53539.1| hypothetical protein OsJ_36748 [Oryza sativa Japonica Group]
Length = 481
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 129 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 186
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 187 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 240
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP----- 184
+ + R +G P L +++ + ++ +AL+ AF +PL IP
Sbjct: 241 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL-PIPQTDSY 290
Query: 185 --VKGFSFQDSEVLSWAHCDSSK 205
+G +D + LSW ++ K
Sbjct: 291 GTFEGAFVKDVDSLSWMANNTQK 313
>gi|134291313|ref|YP_001115082.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
gi|134134502|gb|ABO58827.1| FAD dependent oxidoreductase [Burkholderia vietnamiensis G4]
Length = 351
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 23/195 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGAP+FT + +A V W + G A W+ + S + + + +YVGVP
Sbjct: 61 DHGAPYFTAQHPAFVAEVARWVASGAAAPWEARVASIGALGPRALLAPA----LRYVGVP 116
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM++ + L G+ + + E + D + W + + L + V V
Sbjct: 117 GMSAPAQRL--SAGIRTLCETTI--VELIRDGDCWRATSAEHGVLDAHHDAVI----VAV 168
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF--SFQDSE 194
P + V PL P LAV + + + +M +P GF +F ++
Sbjct: 169 PAPQAV-----PLLRHAEPGLAVIAQRSEMRATWTVM----AQCRGLPDAGFDAAFVNAG 219
Query: 195 VLSWAHCDSSKPGRS 209
L W D+SKPGR+
Sbjct: 220 PLGWIANDTSKPGRA 234
>gi|386021221|ref|YP_005939245.1| amine oxidase, flavin-containing [Pseudomonas stutzeri DSM 4166]
gi|327481193|gb|AEA84503.1| amine oxidase, flavin-containing [Pseudomonas stutzeri DSM 4166]
Length = 346
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++ G V +W L F +
Sbjct: 59 RMASKRSDAGSLDLGAQYFTARDRRFAETVRQWQARGWVDQWTPTL--FQSRDGQLSPSA 116
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ G S G F
Sbjct: 117 DEQL--RWVGTPTMSAITRGLLGEMPVTFSCRI----TEVFRGEQYWTLVDATGASHGPF 170
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 171 SHVVIALPAPQA-----------AALLSGAPKLAAVAASVAMEPTWAVALGFATPLDT-A 218
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD + L W + SKPGR
Sbjct: 219 LEGCFVQD-DALDWIARNRSKPGR 241
>gi|303271869|ref|XP_003055296.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463270|gb|EEH60548.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 450
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 84/262 (32%), Gaps = 62/262 (23%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
S R E + FDHG T T+ A E G +A W G F+
Sbjct: 45 SSSRPAGETTPPLTFDHGCQLLTATDASFRARCATLERAGAIARWDARFGVLRARDGAFI 104
Query: 62 NIQQDGMNKK------------------YVGVPGMNSICKAL---CHQPGVESKFGVGVG 100
+ D K +VG P M L C + V V
Sbjct: 105 A-KADLPTKTSSDDRPPDFFGVLSSEDVFVGTPTMVGASDGLLSACSIARTTQRQRVCVT 163
Query: 101 RFEWLEDKNLWSVSGLD----------------GQSLGQFNGVVASDKNVVSPRFRDVTG 144
W V G+D + LG F+ VV +D + +G
Sbjct: 164 SLTRSAKTRSWRVMGVDVGRKRVDAKEAAAKMGERDLGSFDAVVVTDVMCAT------SG 217
Query: 145 RPPPLDLTFAPDLAV------------------KLEEIPVNPCFALMLAFSEPLSSIPVK 186
P LTF + ++ +P F+LM+AF PL+ P
Sbjct: 218 TPGSCALTFEGEDGDGDGSDSDGSDSVAAACWREMSALPPQSLFSLMIAFPTPLTGPPFD 277
Query: 187 GFSFQDSEVLSWAHCDSSKPGR 208
+DS+V+ + DSSKPGR
Sbjct: 278 AAVVEDSDVVQFLSRDSSKPGR 299
>gi|115489414|ref|NP_001067194.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|77556443|gb|ABA99239.1| expressed protein [Oryza sativa Japonica Group]
gi|113649701|dbj|BAF30213.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|215701342|dbj|BAG92766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 497
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 202
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 203 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 256
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP----- 184
+ + R +G P L +++ + ++ +AL+ AF +PL IP
Sbjct: 257 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL-PIPQTDSY 306
Query: 185 --VKGFSFQDSEVLSWAHCDSSK 205
+G +D + LSW ++ K
Sbjct: 307 GTFEGAFVKDVDSLSWMANNTQK 329
>gi|125537277|gb|EAY83765.1| hypothetical protein OsI_38983 [Oryza sativa Indica Group]
Length = 497
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
++FDH A FFT ++ +V EW GLV EW +G D + +Y+
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLVREWGGLIGELD--AGGHFRPMPSSSPPRYI 202
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVA 129
GV GM + A+ + + + V R W+ LW + + + GQ++ +V
Sbjct: 203 GVDGMRPLADAILPESDL-----IEVVRPCWISKLEPFNGLWRLFE-NEKPHGQYDAIVI 256
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP----- 184
+ + R +G P L +++ + ++ +AL+ AF +PL IP
Sbjct: 257 AHNGKCANRLLSTSG---------LPLLTRQMKRLQLSSVWALLAAFQDPL-PIPQTDSY 306
Query: 185 --VKGFSFQDSEVLSWAHCDSSK 205
+G +D + LSW ++ K
Sbjct: 307 GTFEGAFVKDVDSLSWMANNTQK 329
>gi|159485780|ref|XP_001700922.1| hypothetical protein CHLREDRAFT_167639 [Chlamydomonas reinhardtii]
gi|158281421|gb|EDP07176.1| predicted protein [Chlamydomonas reinhardtii]
Length = 856
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/216 (25%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQ-DGMNKKYVG 74
+DHG FF T+ + LV EW + G+VAEW+ LG +D S F ++ + G
Sbjct: 21 YDHGCQFFKATSPAMKKLVAEWVAAGVVAEWRPKLGVYDASSGVFKRREELSAAELQAAG 80
Query: 75 VPGMNSICKA----LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130
+S+ A +P +++ G G L LW +LG F+ ++ +
Sbjct: 81 SGFFDSLSPASGPMYVAKPSMDTLVGSNGGVDPGLPAGELW--------NLGVFDALLIT 132
Query: 131 DKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGF 188
D SP G L L +L + P F+LM+ + ++ +P
Sbjct: 133 DS---SPGQITFEGGTAALSA-----LVARLAALTRVPLFSLMVGWPPNVAGALLPGDAV 184
Query: 189 SFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTS 224
+ W D+SKPGR +D T W +
Sbjct: 185 HVVGGSAVQWVANDTSKPGRE-----RDDGLTCWVA 215
>gi|422587420|ref|ZP_16662091.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330873291|gb|EGH07440.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 328
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPQLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +GQ+ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDMPVSFSCRI--TEVFRGEEHWNLLDAEGQNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKP R
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPER 222
>gi|422651899|ref|ZP_16714689.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330964972|gb|EGH65232.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 328
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWAPQLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + E + W++ +GQ+ G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDMPVSFSCRI--TEVFRGEEHWNLLDAEGQNHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKP R
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPER 222
>gi|428773848|ref|YP_007165636.1| amine oxidase [Cyanobacterium stanieri PCC 7202]
gi|428688127|gb|AFZ47987.1| amine oxidase [Cyanobacterium stanieri PCC 7202]
Length = 321
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S + DHG +F+++NN + ++ + G ++ W+ S++ V +
Sbjct: 40 RMSSRRTDWGYIDHGTQYFSLSNNQLKEFIKIY--GDVLKPWQGKFASWENG----VFEK 93
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D KYV MN++CK L V+ K + ++ + W++ G F
Sbjct: 94 DDSPKIKYVPDKAMNNLCKFLGGDITVKLKTRI----CSIVKVDDSWTLRDEQNHCYGDF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+GV+ + +P ++ T P D F ++A +I + PCF+LM+ E ++P
Sbjct: 150 DGVI-----ITAPPYQ--TANLLPDDCLFKAEIA----QIKMFPCFSLMV-IPETKINLP 197
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
G F+ +L W + +KP R
Sbjct: 198 FTGVKFK-HPILGWISDNDTKPHR 220
>gi|357976443|ref|ZP_09140414.1| putative deoxyribodipyrimidine photolyase [Sphingomonas sp. KC8]
Length = 314
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + G E+ FDHGA +FT + D V W + G+V W++
Sbjct: 39 MSTRRVETSLG-EVSFDHGAQYFTARSPDFCKQVESWAARGIVRRWQLP----------- 86
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++G PGMN++ KA+ + V ++ V V R E W + D
Sbjct: 87 -------APDAWIGAPGMNAMVKAMAGEHDV--RWNVHVNRIE--RHAGGWLLEA-DETR 134
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
G + + + + F + + + A + + + PC+ M S+PL
Sbjct: 135 FGDIDTAILAIPAEQALPFLSLH------NFSMAREALLARSQ----PCWTAMFTLSQPL 184
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
P +D + ++WA +++KPGR
Sbjct: 185 IQGPDM---IRDEDDIAWAARNNAKPGR 209
>gi|407958012|dbj|BAM51252.1| hypothetical protein BEST7613_2321 [Bacillus subtilis BEST7613]
Length = 318
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +F + LA V +W G+V W +G+ + I+ G+ K Y G
Sbjct: 40 FDFGAQYFKAQHPLFLAWVEDWIKAGVVKVWAEGMGT------ETGTIRSQGV-KLYRGE 92
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P S+ + L V ++ V F W N+W + G G+ D+ VV
Sbjct: 93 PSNRSLAQYLAQDLKVVNQEKVNA--FHW--QDNIWQIHCDSG-------GIYQGDRLVV 141
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
+ ++ D+ L + +PCF+L L +P S +P G + E
Sbjct: 142 TAPLPQTLELLTVSNINLPADIQQTLTGVVYDPCFSLSLLLEQP-SLVPDPGGLWLSGEP 200
Query: 196 LSWAHCDSSK 205
L+W C + K
Sbjct: 201 LAWMACSTKK 210
>gi|398992811|ref|ZP_10695772.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM21]
gi|398136267|gb|EJM25359.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM21]
Length = 328
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L ++ +
Sbjct: 40 RMSSKRSDAGALDLGAQYFTARDRRFVTEVQRWQTNGWAAEWTPQLYTYHGGQLSLSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E +F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPHMSAITRGLLGD--LEVQFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATALLAAASKLAGVA------AGVKMDPTWAVALAFETPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|298159722|gb|EFI00764.1| Amine oxidase, flavin-containing [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 328
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G++ G
Sbjct: 97 ---PDEQVRWVGEPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGENHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKPGR
Sbjct: 199 -PMQGCFVQDS-TLDWLARNRSKPGR 222
>gi|443322975|ref|ZP_21051987.1| putative NAD/FAD-dependent oxidoreductase [Gloeocapsa sp. PCC
73106]
gi|442787279|gb|ELR97000.1| putative NAD/FAD-dependent oxidoreductase [Gloeocapsa sp. PCC
73106]
Length = 331
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 81/208 (38%), Gaps = 31/208 (14%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR + + E + D+GAP FT + ALV +W L+ W S F
Sbjct: 43 LATRRLSHPEYGEGVIDYGAPHFTANGPEFKALVSQWLEQNLIKVW----------STGF 92
Query: 61 VNIQ-QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ 119
V+ Q Y G G +I K L V + V + W + N W
Sbjct: 93 VSSNGQIEETTYYCGREGNRAIAKHLAQNLNVHTN--TQVTKVVW--EANYWQAH----- 143
Query: 120 SLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAV--KLEEIPVNPCFALMLAFS 177
A+D+ P L+L + +LA+ KL E+ +PC A +L
Sbjct: 144 --------TATDQIFTGEYLLLTPPVPQSLELLKSLNLALPQKLTEVAYHPCIA-VLTLL 194
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSK 205
E S IP G + + L+W +C+ K
Sbjct: 195 EAESHIPPPGGLWLNGNPLTWINCNHQK 222
>gi|16330108|ref|NP_440836.1| hypothetical protein sll1135 [Synechocystis sp. PCC 6803]
gi|383321851|ref|YP_005382704.1| hypothetical protein SYNGTI_0942 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325020|ref|YP_005385873.1| hypothetical protein SYNPCCP_0941 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490904|ref|YP_005408580.1| hypothetical protein SYNPCCN_0941 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436171|ref|YP_005650895.1| hypothetical protein SYNGTS_0942 [Synechocystis sp. PCC 6803]
gi|451814267|ref|YP_007450719.1| hypothetical protein MYO_19490 [Synechocystis sp. PCC 6803]
gi|1652595|dbj|BAA17516.1| sll1135 [Synechocystis sp. PCC 6803]
gi|339273203|dbj|BAK49690.1| hypothetical protein SYNGTS_0942 [Synechocystis sp. PCC 6803]
gi|359271170|dbj|BAL28689.1| hypothetical protein SYNGTI_0942 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274340|dbj|BAL31858.1| hypothetical protein SYNPCCN_0941 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277510|dbj|BAL35027.1| hypothetical protein SYNPCCP_0941 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451780236|gb|AGF51205.1| hypothetical protein MYO_19490 [Synechocystis sp. PCC 6803]
Length = 334
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 19/190 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +F + LA V +W G+V W +G+ + I+ G+ K Y G
Sbjct: 56 FDFGAQYFKAQHPLFLAWVEDWIKAGVVKVWAEGMGT------ETGTIRSQGV-KLYRGE 108
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P S+ + L V ++ V F W N+W + G G+ D+ VV
Sbjct: 109 PSNRSLAQYLAQDLKVVNQEKVNA--FHW--QDNIWQIHCDSG-------GIYQGDRLVV 157
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
+ ++ D+ L + +PCF+L L +P S +P G + E
Sbjct: 158 TAPLPQTLELLTVSNINLPADIQQTLTGVVYDPCFSLSLLLEQP-SLVPDPGGLWLSGEP 216
Query: 196 LSWAHCDSSK 205
L+W C + K
Sbjct: 217 LAWMACSTKK 226
>gi|365092851|ref|ZP_09329931.1| hypothetical protein KYG_14348 [Acidovorax sp. NO-1]
gi|363415037|gb|EHL22172.1| hypothetical protein KYG_14348 [Acidovorax sp. NO-1]
Length = 338
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 1 MSQRRETSEDGN-EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKK 59
MS RR +EDG+ DHGA +FT + A V W+ G+ A W L SFD +
Sbjct: 46 MSTRR--AEDGHGAWQCDHGAQYFTARDPGFRAEVDRWQQAGVAALWNARLASFDGSAWT 103
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ 119
+ + ++VG P M S L G + R +W Q
Sbjct: 104 TPHTPLE----RFVGTPRMTSPAAWLVQHLGDRA-------RAQWQTTV----------Q 142
Query: 120 SLGQFNG---VVASDKNVVSPRFRDVTGRPP-----PLDLTFAPDLAVKLEEIPVNPCFA 171
LG +G + ++++ + S R+ V P PL AP A + +A
Sbjct: 143 RLGFADGGWAITSAEQGLHSQRYGTVLLAVPAPQVVPLLAPVAPAGAAMAASARMRGSWA 202
Query: 172 LMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+ML ++ P+ ++P +G +F ++ L W DSSKP R+
Sbjct: 203 VMLRYASPV-ALPWEG-AFINTGPLRWVARDSSKPSRT 238
>gi|70732460|ref|YP_262222.1| FAD dependent oxidoreductase [Pseudomonas protegens Pf-5]
gi|68346759|gb|AAY94365.1| FAD dependent oxidoreductase [Pseudomonas protegens Pf-5]
Length = 328
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +
Sbjct: 40 RMSSKRSDAGSLDLGAQYFTARDRRFVTEVQRWQAKGWVAEWTPQL--YNSHGGQLSPSP 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VG P M++I +AL +E+ F + E + W + +G + G F
Sbjct: 98 DE--QTRWVGTPRMSAITRALIGD--LEAHFACRI--TEVFRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + +A + ++P +A+ LAF PL + P
Sbjct: 152 SHVV-----IATPAPQATALL---AAAPKLAGVAAG---VKMDPTWAVALAFDTPLET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSAN 211
++G QDS L W + SKPGR ++
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGRDSH 225
>gi|443326788|ref|ZP_21055430.1| putative NAD/FAD-dependent oxidoreductase [Xenococcus sp. PCC 7305]
gi|442793581|gb|ELS03026.1| putative NAD/FAD-dependent oxidoreductase [Xenococcus sp. PCC 7305]
Length = 341
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 82/205 (40%), Gaps = 19/205 (9%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR + E +FD+GA FTV++ V EW +V W S D
Sbjct: 52 LATRRIEHSEAVEGIFDYGAQHFTVSDPKFQVWVDEWLKKDIVEAWNKGFPSVDG----- 106
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
NIQQ+ Y GV +I K L + V + + + W++ +G +
Sbjct: 107 -NIQQEN-QVYYRGVVSNRNIAKYLSQELDVHTSTKI----INLNRQNSQWNLEADNGAN 160
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
D +++ ++ AP++ +LE+I + C A++ +P
Sbjct: 161 F-------VGDILIMTAPIPQSLALLDSSHISLAPEIRDRLEQIVYHKCIAILALLDKP- 212
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSK 205
S IP G F D + L+W + K
Sbjct: 213 SKIPKPGGLFLDGKPLAWIASNHHK 237
>gi|289624745|ref|ZP_06457699.1| hypothetical protein PsyrpaN_06332 [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648374|ref|ZP_06479717.1| hypothetical protein Psyrpa2_11579 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|416014639|ref|ZP_11562389.1| hypothetical protein PsgB076_04863 [Pseudomonas syringae pv.
glycinea str. B076]
gi|416029108|ref|ZP_11571997.1| hypothetical protein PsgRace4_26606 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422406633|ref|ZP_16483657.1| hypothetical protein Pgy4_23281 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422584092|ref|ZP_16659207.1| hypothetical protein PSYAE_17033 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598309|ref|ZP_16672572.1| hypothetical protein PLA107_26430 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|320325706|gb|EFW81767.1| hypothetical protein PsgB076_04863 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320327375|gb|EFW83389.1| hypothetical protein PsgRace4_26606 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868914|gb|EGH03623.1| hypothetical protein PSYAE_17033 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330881869|gb|EGH16018.1| hypothetical protein Pgy4_23281 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330988589|gb|EGH86692.1| hypothetical protein PLA107_26430 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 328
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G++ G
Sbjct: 97 ---PDEQVRWVGEPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGENHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKPGR
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGR 222
>gi|257482024|ref|ZP_05636065.1| hypothetical protein PsyrptA_02082, partial [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 304
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW L +F R+S
Sbjct: 16 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS--- 72
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G++ G
Sbjct: 73 ---PDEQVRWVGEPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGENHG 125
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 126 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 174
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKPGR
Sbjct: 175 -PMQGCFVQDSP-LDWLARNRSKPGR 198
>gi|409397881|ref|ZP_11248739.1| amine oxidase, flavin-containing [Pseudomonas sp. Chol1]
gi|409117620|gb|EKM94047.1| amine oxidase, flavin-containing [Pseudomonas sp. Chol1]
Length = 328
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +FT + ++ W+ G A W NL R + + + ++VG
Sbjct: 52 FDLGAQYFTARDRRFREALQHWQEEGWAAPWSPNL-YLSRAGQLEPSTDE---QARWVGT 107
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M SI +AL V + E + LW++ DG S G F+ V+ V
Sbjct: 108 PQMASIARALLGDLPVTFSCRI----TEAFRGEELWTLVDADGASHGPFSHVI-----VA 158
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
+P + L AP LA + + P +A+ L F+ PL + V+G QD +
Sbjct: 159 TPAPQASA------LLAAAPKLAAVAASVAMEPTWAVALGFATPLPT-QVEGCFVQD-DA 210
Query: 196 LSWAHCDSSKPGRSANRLCKDCNCTN 221
L W + SKPGR+ + + TN
Sbjct: 211 LDWLARERSKPGRNGHLDTWVLHATN 236
>gi|397169902|ref|ZP_10493329.1| FAD dependent oxidoreductase [Alishewanella aestuarii B11]
gi|396088430|gb|EJI86013.1| FAD dependent oxidoreductase [Alishewanella aestuarii B11]
Length = 322
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R TS+ E D GA +FT + +A V++W+ G+VA W + F V+ K +
Sbjct: 38 RMTSKRSAEGYLDLGAQYFTARHPAFMAQVQQWQQQGVVAPWLAAMSQF--VAGKL--LP 93
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++VGVP M+S + L G++ + + R W +D + W + GQ G F
Sbjct: 94 SPDAQLRFVGVPAMHSPLRQLAQ--GLDIHYQCQLQRI-WQQD-HYWWLQDTTGQDYGPF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAP-DLAVKLEEIPVNPCFALMLAFSEPLSSI 183
+ VV + PP P + + L + + PC+A+ L + P S
Sbjct: 150 SQVVLT--------------VPPQQAAALLPAEFSTLLPQQILTPCWAVDLQLTRP-SGS 194
Query: 184 PVKGFSFQDSEV-LSWAHCDSSKPGRS 209
V G +D ++ LSW +SKPGR+
Sbjct: 195 NVGGIFVKDPQLPLSWLCRQNSKPGRA 221
>gi|289670313|ref|ZP_06491388.1| hypothetical protein XcampmN_17966 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 330
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G+ DHGA +FT + A+V W G+ A W+ + S+D
Sbjct: 45 GDHWQCDHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGAQLS----HSHSALT 100
Query: 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130
+YVGVP M + +AL ++ + V + WSVS + F+ V+ +
Sbjct: 101 RYVGVPDMAAPARALAVH--LDIRLSTEVHALQ--RSGQGWSVSCAQDTAAHMFDAVLLA 156
Query: 131 DKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSF 190
V +P + PP+ AP + + P +A++ F P+ P F
Sbjct: 157 ---VPTPNAAKLF---PPI----APAFSSIAPHAQMQPAWAVIAHFDGPVD--PGYDALF 204
Query: 191 QDSEVLSWAHCDSSKPGRS 209
++ L W +SSKP R+
Sbjct: 205 VNNGPLRWVARNSSKPARA 223
>gi|422679535|ref|ZP_16737808.1| hypothetical protein PSYTB_04115 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331008882|gb|EGH88938.1| hypothetical protein PSYTB_04115 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 288
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYV 73
D GA +FT + V++W++ G VAEW L +F R+S ++V
Sbjct: 11 LDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHGGRLSPS------PDEQVRWV 64
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKN 133
G PGM++I +A+ + + F + + W++ +G++ G F+ V+
Sbjct: 65 GEPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGENHGPFSHVI----- 115
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS 193
+ +P + L AP LA + + ++P +A+ LAF PL + P++G QDS
Sbjct: 116 IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT-PMQGCFVQDS 168
Query: 194 EVLSWAHCDSSKPGR 208
L W + SKPGR
Sbjct: 169 P-LDWLARNRSKPGR 182
>gi|404399157|ref|ZP_10990741.1| oxidoreductase [Pseudomonas fuscovaginae UPB0736]
Length = 328
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VAEW L ++ +N+
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFVNEVQRWQAQGWVAEWDPKLYTWQNGQ---LNLS 96
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
D ++VG P M++I + L + + S F + E + W + +G + G F
Sbjct: 97 PD-EQTRWVGTPRMSAITRGLLGE--LSSHFSCRIT--EVFRGEQHWHLQDSEGVTYGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + L AP LA + + P +A+ LAF L + P
Sbjct: 152 SHVV-----IATPAPQATA------LLAAAPKLAGAAAGVQMEPTWAVALAFETALQT-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 MEGCFVQDSP-LDWLARNRSKPGR 222
>gi|386855570|ref|YP_006259747.1| putative nad/fad-dependent oxidoreductase [Deinococcus gobiensis
I-0]
gi|379999099|gb|AFD24289.1| putative nad/fad-dependent oxidoreductase oxidoreductase protein
[Deinococcus gobiensis I-0]
Length = 334
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 19/204 (9%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
+ RR + G E DHGA FFT + +L R E+ G + W +++ +
Sbjct: 41 ATRRVRLDRGREARLDHGARFFTARGERLRSLARAGEAAGWLRAWATGFPTWE---AGEI 97
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
+ G + +Y V G++++ + L G++ +GV R E W V DG
Sbjct: 98 RVDGGGEHPRYAPVDGLSALGRHLGE--GLDVAYGVTAARLE--RGGAGWRVHD-DGGGT 152
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ +V N+ + + + G AP+L L + +PC+A+ + L+
Sbjct: 153 HEARRLV---LNLPAAQASALLG-------EHAPELRAALSGVTYDPCWAVGAVLEQDLA 202
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSK 205
+ F+ L WA + +K
Sbjct: 203 A-DWPALRFKGHPALDWAAREHTK 225
>gi|58581488|ref|YP_200504.1| hypothetical protein XOO1865 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|58426082|gb|AAW75119.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC
10331]
Length = 363
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 78 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 133
Query: 71 KYVGVPGMNSICKALC-----HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+YVGVP M + + L H +GV WSVS + F+
Sbjct: 134 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGV---------QGWSVSFAQDAATHMFD 184
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV 185
V+ + V +P + + AP A ++ ++P +A+M F P+ P
Sbjct: 185 AVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPID--PG 232
Query: 186 KGFSFQDSEVLSWAHCDSSKPGRS 209
F ++ L W ++SKP R+
Sbjct: 233 YDALFVNAGPLRWVARNASKPARA 256
>gi|188577273|ref|YP_001914202.1| lipoprotein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521725|gb|ACD59670.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 344
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 59 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 114
Query: 71 KYVGVPGMNSICKALC-----HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+YVGVP M + + L H +GV WSVS + F+
Sbjct: 115 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGV---------QGWSVSFAQDAATHMFD 165
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV 185
V+ + V +P + + AP A ++ ++P +A+M F P+ P
Sbjct: 166 AVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPID--PG 213
Query: 186 KGFSFQDSEVLSWAHCDSSKPGRS 209
F ++ L W ++SKP R+
Sbjct: 214 YDALFVNAGPLRWVARNASKPARA 237
>gi|71737721|ref|YP_273285.1| hypothetical protein PSPPH_1014 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558274|gb|AAZ37485.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 328
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G V+EW L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVSEWTPLLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G++ G
Sbjct: 97 ---PDEQVRWVGEPGMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGENHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QDS L W + SKPGR
Sbjct: 199 -PMQGCFVQDSP-LDWLARNRSKPGR 222
>gi|85374513|ref|YP_458575.1| transmembrane protein [Erythrobacter litoralis HTCC2594]
gi|84787596|gb|ABC63778.1| putative transmembrane protein [Erythrobacter litoralis HTCC2594]
Length = 310
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 79/199 (39%), Gaps = 41/199 (20%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G + FDHGA +FT + + V W S G A W D
Sbjct: 50 GETVTFDHGAQYFTARDPRFVEAVEGWTSAGFAAPWP------------------DAGED 91
Query: 71 KYVGVPGMNSICKALCHQPGVESKFGV-GVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
YVG PGMN+ K + V+ + G+ L D+ W + + +
Sbjct: 92 AYVGTPGMNAPIKQMAQFFNVQWNTRIDGI-----LRDELGWHL---------RAENTIF 137
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFS 189
+N+V + L A D A + + PC+ALM+ F PL ++P F+
Sbjct: 138 RAQNLVCAIPAEQAAE---LLEKQASDFAAQAAAVQSRPCWALMMGFDTPL-AMP-NTFT 192
Query: 190 FQDSEVLSWAHCDSSKPGR 208
D ++WA +SSKPGR
Sbjct: 193 GND---VAWAARNSSKPGR 208
>gi|84623417|ref|YP_450789.1| hypothetical protein XOO_1760 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84367357|dbj|BAE68515.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 344
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 59 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 114
Query: 71 KYVGVPGMNSICKALC-----HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFN 125
+YVGVP M + + L H +GV WSVS + F+
Sbjct: 115 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGV---------QGWSVSFAQDAATHMFD 165
Query: 126 GVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV 185
V+ + V +P + + AP A ++ ++P +A+M F P+ P
Sbjct: 166 AVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPID--PG 213
Query: 186 KGFSFQDSEVLSWAHCDSSKPGRS 209
F ++ L W ++SKP R+
Sbjct: 214 YDALFVNAGPLRWVARNASKPARA 237
>gi|428178524|gb|EKX47399.1| hypothetical protein GUITHDRAFT_106844 [Guillardia theta CCMP2712]
Length = 426
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DH FFT T+ ALV EWE G+V EWK +G D+ S F + +K +VGV
Sbjct: 51 DHSTQFFTATDPKFTALVEEWEKNGVVQEWKGPVGVLDKGS--FTGLAAS--SKLWVGVG 106
Query: 77 GMNSICKALCHQPGVESKFGVGV 99
G+++I + L VE V V
Sbjct: 107 GIDAIARHLSKSLRVELDTWVAV 129
>gi|381172517|ref|ZP_09881643.1| putative uncharacterized protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687007|emb|CCG38130.1| putative uncharacterized protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 336
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + F+ V+ + V +
Sbjct: 113 EMPAPARTLAAQLDVRLCAEVHALR----RSRQGWRVSVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P+ P F ++ L
Sbjct: 166 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAPID--PGYDALFVNAGAL 216
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 217 RWVARNSSKPARA 229
>gi|399008565|ref|ZP_10711035.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM17]
gi|398116001|gb|EJM05772.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM17]
Length = 327
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWAPQLYNFHGGQLTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L + E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGE--TEVHFACRI--TEVYRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF L + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAVALAFESALET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
V+G QDS L W + SKPGR
Sbjct: 200 VEGCFVQDSP-LDWLARNRSKPGR 222
>gi|399519486|ref|ZP_10760281.1| FAD dependent oxidoreductase [Pseudomonas pseudoalcaligenes CECT
5344]
gi|399112582|emb|CCH36839.1| FAD dependent oxidoreductase [Pseudomonas pseudoalcaligenes CECT
5344]
Length = 328
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G VAEW+ +L +
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQARGWVAEWQPSLYN-----------A 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
QDG ++VG P M++I +A+ + KF + E WS+ +
Sbjct: 89 QDGQLSASPDEQVRWVGCPRMSAITRAMLG--ALPVKFSCRI--TEVFRGDRYWSLLDAE 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G S G ++ V+ V +P + L AP LA + ++P +A+ L F
Sbjct: 145 GNSHGPYSHVI-----VATPAPQASA------LLAAAPKLAGAAASVIMDPTWAVALGFD 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
PL + V+G QDS L W + SKPGR
Sbjct: 194 SPLDT-RVEGCFVQDSP-LDWLARNPSKPGR 222
>gi|425901484|ref|ZP_18878075.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883125|gb|EJK99611.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 327
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWAPQLYNFHGGQLTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L + E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGE--TEVHFACRI--TEVYRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF L + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAVALAFETALET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
V+G QDS L W + SKPGR
Sbjct: 200 VEGCFVQDSP-LDWLARNRSKPGR 222
>gi|390993399|ref|ZP_10263564.1| putative deoxyribodipyrimidine photolyase [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372551868|emb|CCF70539.1| putative deoxyribodipyrimidine photolyase [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 336
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + F+ V+ + V +
Sbjct: 113 EMPAPARTLAAQLDVRLCAEVHALR----RSRQGWRVSVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P+ P F ++ L
Sbjct: 166 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAPID--PGYDALFVNAGAL 216
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 217 RWVARNSSKPARA 229
>gi|389685948|ref|ZP_10177271.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis O6]
gi|388550290|gb|EIM13560.1| FAD dependent oxidoreductase [Pseudomonas chlororaphis O6]
Length = 327
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G AEW L +F +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWAAEWAPQLYNFHGGQLTPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L + E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGE--TEVHFACRI--TEVYRGEQHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + +P + L AP LA + ++P +A+ LAF L + P
Sbjct: 152 SHVI-----IATPAPQATA------LLAAAPKLASAAAGVKMDPTWAVALAFETALET-P 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
V+G QDS L W + SKPGR
Sbjct: 200 VEGCFVQDSP-LDWLARNRSKPGR 222
>gi|294626956|ref|ZP_06705547.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598816|gb|EFF42962.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 336
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RPQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W V+ + F+ V+ + V +
Sbjct: 113 EMTAPARTLAAQLDVRLCAEVHALR----RSRQGWRVAVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P+ P F ++ L
Sbjct: 166 PSTAALLAQAAPALRTIA-------EQVRMQPAWAVMARFDVPID--PGYDALFVNAGAL 216
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 217 RWVARNSSKPART 229
>gi|288555896|ref|YP_003427831.1| FAD dependent oxidoreductase [Bacillus pseudofirmus OF4]
gi|288547056|gb|ADC50939.1| FAD dependent oxidoreductase [Bacillus pseudofirmus OF4]
Length = 336
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 32/220 (14%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFT ++ + +LV W G V EW D + V+++ DG +YVG
Sbjct: 54 DHGAQFFTARSDVMKSLVDSWMEEGTVNEWTKGFHQMDLGGQ--VHLEADGY-PRYVGSS 110
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMN++ K+L + + L + + LD Q Q+ V ++++ V+
Sbjct: 111 GMNTLTKSLVDENDI------------LLNHRAVH----LDYQK-QQWQLEVINEQDSVT 153
Query: 137 PRFRD---VTGRPPPLDLT------FAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
+ ++ P P LT D+ ++L I +PC LM+ S IP KG
Sbjct: 154 ETIQAAGIISTIPIPQVLTWMNLELLESDIKIELANITYDPCICLMVTLRND-SRIPPKG 212
Query: 188 FSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAF 227
+ +V D+ + G S + W+S F
Sbjct: 213 GIQGEGDVAFIG--DNQQKGISTKPIITIHASGEWSSNNF 250
>gi|333914188|ref|YP_004487920.1| FAD dependent oxidoreductase [Delftia sp. Cs1-4]
gi|333744388|gb|AEF89565.1| FAD dependent oxidoreductase [Delftia sp. Cs1-4]
Length = 352
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 29/216 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR G DHGAP F + + + VR+WE G+VA W+ R+ K
Sbjct: 43 MSTRRAQDPQGAWQC-DHGAPSFAAQDPEFVQEVRQWEQHGVVAAWRPR---AVRLQGKD 98
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
V + D ++VGVP M S L Q G ++ + + + W+V +
Sbjct: 99 V-VPADAGPDRWVGVPRMTSPSAFLVQRLAQQGHGARLHLQTTVQQLQYESACWTVHCAE 157
Query: 118 -GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
GQ ++ +V + V +P+ + P +A LA + PC+ ML
Sbjct: 158 HGQIGSEYCALVLA---VPAPQAAALLEPVSP----YASALAASAR---MQPCWVAMLRT 207
Query: 177 SEPLSSIPVKGFSFQDSEV----LSWAHCDSSKPGR 208
PL + +E+ L W DS+KPGR
Sbjct: 208 DAPLP------LDWDAAEITDGPLCWVARDSAKPGR 237
>gi|254432493|ref|ZP_05046196.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
gi|197626946|gb|EDY39505.1| conserved hypothetical protein [Cyanobium sp. PCC 7001]
Length = 391
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
S RR +++ E+ DHGAP +T + AL+ +GG +A W + + SK +
Sbjct: 33 STRRSRADE--ELAIDHGAPLLNITADPAPALLEPLLAGGWIAPWSGLMALLEGESKLHI 90
Query: 62 -NIQQDGMNKKYVGVPGMNSICKALC------HQPGVESKFGVGVGRFEWLEDKNLWSVS 114
G YVGV GM+ +C+ L + + + + + D W +
Sbjct: 91 GRPDMLGQGDLYVGVGGMDGLCRGLLDLAAQGEGSAISPHYRTLIRSLD-VSDTGTWRLW 149
Query: 115 GLDGQSLGQFNGVVASDKNVVSPR 138
G LGQ + +V S + PR
Sbjct: 150 DGTGGLLGQADWLVLSSTLLAHPR 173
>gi|21242085|ref|NP_641667.1| hypothetical protein XAC1332 [Xanthomonas axonopodis pv. citri str.
306]
gi|21107492|gb|AAM36203.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 336
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + F+ V+ + V +
Sbjct: 113 EMPAPARTLAAQLDVRLCAEVHALR----RGRQGWRVSVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P+ P F ++ L
Sbjct: 166 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAPID--PGYDALFVNAGAL 216
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 217 RWVARNSSKPARA 229
>gi|419954807|ref|ZP_14470942.1| amine oxidase, flavin-containing [Pseudomonas stutzeri TS44]
gi|387968420|gb|EIK52710.1| amine oxidase, flavin-containing [Pseudomonas stutzeri TS44]
Length = 328
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 21/193 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FD GA +FT + ++ W+ G A W NL R + + + ++VG
Sbjct: 52 FDLGAQYFTARDRRFREALQHWQDEGWAAPWAPNL-YLSRAGQLEPSTDE---QLRWVGT 107
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M SI +AL V + E + LW++ +G S G F+ V+ V
Sbjct: 108 PQMASIARALLGDLPVTFSCRI----TEAFRGEELWTLVDANGASHGPFSQVI-----VA 158
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
+P + L AP LA + + P +A+ L FS PL + V+G QD +
Sbjct: 159 TPAPQASA------LLAAAPKLAAVAASVAMEPAWAVALGFSTPLPT-EVEGCFVQD-DA 210
Query: 196 LSWAHCDSSKPGR 208
L W + SKPGR
Sbjct: 211 LDWMARERSKPGR 223
>gi|389877932|ref|YP_006371497.1| FAD dependent oxidoreductase [Tistrella mobilis KA081020-065]
gi|388528716|gb|AFK53913.1| FAD dependent oxidoreductase [Tistrella mobilis KA081020-065]
Length = 351
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 31/222 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR T +DG + FDHGA F T + ++A + E+ L + +
Sbjct: 51 LATRRATLDDGTVLRFDHGAQFMTARSPALVAAMAGAEAANLARRLPAPPLHGPSLHGQP 110
Query: 61 VNIQQDGM----NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGL 116
++D +VG+ GM +I K L G++ + G VG + LW +
Sbjct: 111 PAPERDQPRWVGQPHWVGMGGMTAIAKHLAQ--GLDIRTGTRVGGVV-RTGRGLWRLEDE 167
Query: 117 DGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAV------KLEEIPVNPCF 170
DG L Q R + PP L D+ + ++ V PC+
Sbjct: 168 DGLPLVQAR--------------RLIVTAPPEQTLDLLIDVLLPEGWRRRIASTIVAPCW 213
Query: 171 ALMLAFSEPLSSIPVKGFSFQ-DSEVLSWAHCDSSKPGRSAN 211
ALMLA E ++P+ G ++ + E ++W ++ PGR+A
Sbjct: 214 ALMLAVDE---ALPLPGPRWRPEDEAIAWLGDQTALPGRAAG 252
>gi|422297094|ref|ZP_16384738.1| amine oxidase [Pseudomonas avellanae BPIC 631]
gi|407991586|gb|EKG33409.1| amine oxidase [Pseudomonas avellanae BPIC 631]
Length = 288
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYV 73
D G +FT + V++W++ G VAEW L +F R+S ++V
Sbjct: 11 LDMGTQYFTARDRRFATAVKQWQAQGHVAEWTPQLYNFHGGRLSPS------PDEQVRWV 64
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKN 133
G PGM++I +A+ + + F + E + W++ +GQ+ G F+ V+
Sbjct: 65 GKPGMSAITRAM--RGDMPVSFSCRIT--EVFRGEEHWNLLDDEGQNHGPFSHVI----- 115
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS 193
+ +P + L AP LA + + ++P +A+ LAF PL + P++G QDS
Sbjct: 116 IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT-PMQGCFVQDS 168
Query: 194 EVLSWAHCDSSKPGR 208
L W + SKP R
Sbjct: 169 P-LDWLARNRSKPER 182
>gi|38489211|gb|AAR21290.1| hypothetical protein [Bacillus pseudofirmus OF4]
Length = 214
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 30/180 (16%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFT ++ + +LV W G V EW D + V+++ DG +YVG
Sbjct: 54 DHGAQFFTARSDVMKSLVDSWMEEGTVNEWTKGFHQMDLGGQ--VHLEADGY-PRYVGSS 110
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMN++ K+L + + L + + LD Q Q+ V ++++ V+
Sbjct: 111 GMNTLTKSLVDENDI------------LLNHRAV----HLDYQK-QQWQLEVINEQDSVT 153
Query: 137 PRFRD---VTGRPPPLDLT------FAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKG 187
+ ++ P P LT D+ ++L I +PC LM+ S IP KG
Sbjct: 154 ETIQAAGIISTIPIPQVLTWMNLELLESDIKIELANITYDPCICLMVTLRND-SRIPPKG 212
>gi|404255601|ref|ZP_10959569.1| deoxyribodipyrimidine photolyase [Sphingomonas sp. PAMC 26621]
Length = 313
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 80/213 (37%), Gaps = 38/213 (17%)
Query: 13 EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKY 72
E+ DHGA + + A VR E +VA W D +
Sbjct: 50 EVASDHGAQYLPARDRGFAAQVRRGEWADVVAAWP------------------DSGADAW 91
Query: 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDK 132
+ P +NS+ K+LC V V R E W LD S +F+ ++
Sbjct: 92 MESPAINSLSKSLCAPLTVCWNSRVDALR----EVDQKWV---LDPVSQERFDALI---- 140
Query: 133 NVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQD 192
+ +P + PL + P +A + P PC+ MLAF E I + +D
Sbjct: 141 -IATP-----AEQAAPLLIAHEPAMAGMAQSCPSAPCWTAMLAFDE---RIAIANDIIRD 191
Query: 193 SEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSK 225
+ ++ WA S+KPGR W+S+
Sbjct: 192 AGIIGWAARHSAKPGRGRTETWVIQATAEWSSE 224
>gi|384420080|ref|YP_005629440.1| lipoprotein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462993|gb|AEQ97272.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 344
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 36/207 (17%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G E D+GA +FT + A+V W G+ A W+ + S+D ++ Q+ +
Sbjct: 59 GQEWQCDYGAQYFTARDPAFAAVVDAWIDAGVAAPWQARIASWDGAQ---ISRSQNALT- 114
Query: 71 KYVGVPGMNSICK--------ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
+YVGVP M + + LC + G G WSVS +
Sbjct: 115 RYVGVPDMAAPARWLAANLDVHLCTEACALQLGGQG------------WSVSFAQDAATH 162
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + V +P + + AP A ++ ++P +A+M F P+
Sbjct: 163 MFDAVLLA---VPAPDAVALVAQ-------IAPAFASIAQQAHMHPAWAVMAHFDGPID- 211
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGRS 209
P F ++ L W ++SKP R+
Sbjct: 212 -PGYDALFVNAGPLRWVARNASKPARA 237
>gi|398842544|ref|ZP_10599723.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM102]
gi|398904480|ref|ZP_10652323.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM50]
gi|398105641|gb|EJL95728.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM102]
gi|398175859|gb|EJM63599.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas sp. GM50]
Length = 328
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA +FT + + V+ W++ G VA W L +F + +
Sbjct: 40 RMSSKRSDAGALDMGAQYFTARDRRFVTEVQRWQANGWVAVWTPQLYTFHGGQLRPSPDE 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M++I + L +E F + E + W + +G + G F
Sbjct: 100 Q----TRWVGTPRMSAITRGLLGD--LEVHFACRI--TEVYRGEEHWHLQDAEGFTHGPF 151
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + +P + VK+E P +A+ LAF PL +
Sbjct: 152 SHVV-----IATPAPQATALL-AAAPKLAGAAAGVKME-----PTWAVALAFDTPLET-A 199
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QDS L W + SKPGR
Sbjct: 200 IEGCFVQDSP-LDWLARNRSKPGR 222
>gi|414868816|tpg|DAA47373.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 384
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 42/230 (18%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 174 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLFE-NEKPRGEY 227
Query: 125 NGVVASDKNVVSPRFRDVTGRP-----------------------PPLDLTFAPDLAVKL 161
+ VV + + R +G P L L AV
Sbjct: 228 DAVVIAHNGKCANRLLSTSGLPLLTKQMKVPWFYYCNNFLTHEAYILLFLLLTKFPAVND 287
Query: 162 EEIPVNPCFALMLAFSEPL------SSIPVKGFSFQDSEVLSWAHCDSSK 205
+ + ++ +AL+ AF +PL S+ +G +D + LSW ++ K
Sbjct: 288 QRLELSSVWALLAAFEDPLPIPLLDSNAAFEGAFVRDVDSLSWMGNNTRK 337
>gi|260222875|emb|CBA32880.1| hypothetical protein Csp_B16240 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 347
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 32/210 (15%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN----LGSFDRVSKKFVNIQQDGMNKK 71
FDHGA +FTV + ++ + GL W N L S RV+ + G +
Sbjct: 53 FDHGAQYFTVRDARFTQALQT--TPGLCRPWSANTVRVLDSHGRVAAAAL----PGRDAH 106
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL----WSV--SGLDGQS--LGQ 123
+V PGMN++ +A +P +++ + R LE +L W + SG G + G
Sbjct: 107 WVPAPGMNALLRAWA-KPLLDAGQLLVNTRVTALEQDSLHKKKWQLRTSGDAGTNHVYGG 165
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP---- 179
F+ V+ + + P+ +++ P LA K ++ V PC+ LMLA+ +
Sbjct: 166 FDEVILA---IPHPQAQELLATTPK-----GAALAKKTSKVSVAPCWTLMLAYPQAVQPG 217
Query: 180 LSSI-PVKGFSFQDSEVLSWAHCDSSKPGR 208
L+++ P + ++W +SSKPGR
Sbjct: 218 LTTLGPQWNAARSTHHRVAWLSRESSKPGR 247
>gi|254439311|ref|ZP_05052805.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus
307]
gi|198254757|gb|EDY79071.1| FAD dependent oxidoreductase, putative [Octadecabacter antarcticus
307]
Length = 314
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 40/205 (19%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + ++ FDHGA + +++ E+ G +A W
Sbjct: 39 RVATRRAGDLQFDHGAQYVNAHGAGFASVLEAQETAGALAGWA----------------- 81
Query: 65 QDGMNKKY-VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
DG + + VGVPGM+++ KAL G++ + V R D W + DG +L
Sbjct: 82 -DGTGRTHMVGVPGMSALPKAL--GSGLDIRQNTQVLRLT--PDAGGWLLHLADG-TLRA 135
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
+ VV V +P+ + G P L +L + + PC LM A P
Sbjct: 136 ASVVV----TVPAPQVAALVGADHP--------LVARLGAVQMAPCLTLMAAVPGP---A 180
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
P + D + LSW DS+KPGR
Sbjct: 181 PFRTRKDAD-DPLSWIAQDSAKPGR 204
>gi|330502054|ref|YP_004378923.1| FAD dependent oxidoreductase [Pseudomonas mendocina NK-01]
gi|328916340|gb|AEB57171.1| FAD dependent oxidoreductase [Pseudomonas mendocina NK-01]
Length = 328
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + + +V++W++ G VAEW+ +L +
Sbjct: 40 RMASKRSDAGSLDLGAQYFTARDRRFVEVVQQWQARGWVAEWQPSLYN-----------A 88
Query: 65 QDGM-------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD 117
QDG ++VG P M++I +A+ + +F + E + WS+ D
Sbjct: 89 QDGQLSASPDEQVRWVGSPRMSAITRAML--GALPVRFSCRI--TEVFRGDHYWSLLDAD 144
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
G+S G ++ V+ V +P + L AP LA + + P +A+ L F
Sbjct: 145 GKSHGPYSHVI-----VATPAPQATA------LLAAAPKLAGAAASVIMEPTWAVALGFD 193
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
L + V+G QDS L W + SKPGR
Sbjct: 194 SALDT-RVEGCFVQDSP-LDWVARNRSKPGR 222
>gi|421619012|ref|ZP_16059976.1| amine oxidase, flavin-containing [Pseudomonas stutzeri KOS6]
gi|409778808|gb|EKN58488.1| amine oxidase, flavin-containing [Pseudomonas stutzeri KOS6]
Length = 328
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++ G V +W NL F +
Sbjct: 41 RMASKRSDAGSLDLGAQYFTTRDRRFSETVRQWQTQGWVDQWSPNL--FQASEGQLRPSA 98
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++VG P M++I + L + V + E + W++ +G S G F
Sbjct: 99 DEQL--RWVGAPTMSAITRGLLGELPVTFNCRI----TEVFRGERFWTLVDANGASHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + + L+ AP LA + + P +A+ L F+ PL +
Sbjct: 153 SQVVIAAPAPQAAAL-----------LSAAPKLAAVAASVAMEPTWAVALGFATPLDTTL 201
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSAN 211
F D+ L W + SKPGR +
Sbjct: 202 EACFVQDDA--LDWVARNRSKPGRDGD 226
>gi|161522869|ref|YP_001585798.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC 17616]
gi|160346422|gb|ABX19506.1| FAD dependent oxidoreductase [Burkholderia multivorans ATCC 17616]
Length = 354
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 31/199 (15%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + +A V W +GG A W + S + + + ++YVGVP
Sbjct: 75 DHGAQYFTARHPAFVAEVARWVAGGAAAPWAARVASIGSLGPR----ELLAPAQRYVGVP 130
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM + + L G+++ + E D W + + +L + V
Sbjct: 131 GMTAPARYLS--AGIDTMLETTI--IELTRDAQRWRLISAEHGALRMHHDAV-------- 178
Query: 137 PRFRDVTGRPPPLDLTF----APDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF--SF 190
+ PPP + P LAV + + P +A+M + +P GF +F
Sbjct: 179 -----IVAVPPPQAVALLRRAEPGLAVIAQRTEMRPAWAVMAQYGR----LPDPGFDAAF 229
Query: 191 QDSEVLSWAHCDSSKPGRS 209
+ L W D+SKPGRS
Sbjct: 230 VNVGPLGWIAHDTSKPGRS 248
>gi|226530158|ref|NP_001140386.1| uncharacterized protein LOC100272440 [Zea mays]
gi|223973745|gb|ACN31060.1| unknown [Zea mays]
Length = 505
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 93/230 (40%), Gaps = 42/230 (18%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 174 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLFE-NEKPRGEY 227
Query: 125 NGVVASDKNVVSPRFRDVTGRP-----------------------PPLDLTFAPDLAVKL 161
+ VV + + R +G P L L AV
Sbjct: 228 DAVVIAHNGKCANRLLSTSGLPLLTKQMKVPWFYYCNNFLTHEAYILLFLLLTKFPAVND 287
Query: 162 EEIPVNPCFALMLAFSEPL------SSIPVKGFSFQDSEVLSWAHCDSSK 205
+ + ++ +AL+ AF +PL S+ +G +D + LSW ++ K
Sbjct: 288 QRLELSSVWALLAAFEDPLPIPLLDSNAAFEGAFVRDVDSLSWMGNNTRK 337
>gi|254503871|ref|ZP_05116022.1| hypothetical protein SADFL11_3910 [Labrenzia alexandrii DFL-11]
gi|222439942|gb|EEE46621.1| hypothetical protein SADFL11_3910 [Labrenzia alexandrii DFL-11]
Length = 283
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 39/206 (18%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T N + FDHGA + T + L++ S EW +
Sbjct: 12 RLATRRAENGLQFDHGAQYITAKTEEFQKLIQSLMSVDAAGEWDM--------------- 56
Query: 64 QQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
G ++GVP MN++ KAL + + V ED+ ++ G+
Sbjct: 57 ---GERTGFIGVPSMNALAKALASDLDIRRQ--AQVSSVTETEDRWFLAI----GEESLV 107
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+ ++ + +P+ + G P ++ ++ + + PC+ LM AF + + ++
Sbjct: 108 FDRLIIT---APAPQTMALLGTGHP--------ISKQIAHVSLLPCWTLMAAFVDEVDAL 156
Query: 184 PVKGFSFQDSEV-LSWAHCDSSKPGR 208
P S +D + L+W + +KPGR
Sbjct: 157 PA---SHRDPDTPLAWIANEKTKPGR 179
>gi|325920669|ref|ZP_08182579.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas gardneri
ATCC 19865]
gi|325548859|gb|EGD19803.1| putative NAD/FAD-dependent oxidoreductase [Xanthomonas gardneri
ATCC 19865]
Length = 336
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 20/226 (8%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S G+ DHGA +FT + A+V EW + G+ A W + S+D + +F Q
Sbjct: 45 RMRSCAGDGWQCDHGAQYFTARDRAFAAVVDEWIATGVAAAWPARVASWDGI--QFRPSQ 102
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ ++VGVP M + +AL ++ + G V + + + W ++ ++ F
Sbjct: 103 S--VLARFVGVPDMAAPARALAAD--LDVRLGTAVRSLQ--RNGDTWCLAVSGDETRRAF 156
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ ++ + V+ AP LA + P +A++L F PL P
Sbjct: 157 DTMLLAVPAPVAAALLQ----------HIAPRLAAIAAGANMQPAWAVVLHFDTPLD--P 204
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSN 230
F ++ L W ++SKPGR+ + +W+ F +
Sbjct: 205 GYDALFVNAGPLRWVARNASKPGRTGSETWLLHANADWSQAHFDAT 250
>gi|399545112|ref|YP_006558420.1| Dehydrosqualene desaturase [Marinobacter sp. BSs20148]
gi|399160444|gb|AFP31007.1| Dehydrosqualene desaturase [Marinobacter sp. BSs20148]
Length = 358
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 80/205 (39%), Gaps = 41/205 (20%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDG-------MN 69
D G +FT N D L +R V W LG QQD
Sbjct: 68 DMGGQYFTTRNPDFLPFLRRHAGEQTVVPWHGLLG-----------YQQDNGDWSEFPAE 116
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
++YVG P M +I + L G+ + V R W + DGQ+LG F+ V+
Sbjct: 117 QRYVGAPRMTAITRGLS--AGLNVQAQTRVARLHRDSQVKKWHLQDADGQNLGAFDQVII 174
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEE--IPVNPCFALMLAFSEPLSSIPVKG 187
+ + L+ + A LA++L + PC+A+ + FS + P
Sbjct: 175 TAPPAQARAL---------LEDSSAAQLAIELNTAVAQILPCWAVAVKFS--TNPWP--- 220
Query: 188 FSFQDSEV----LSWAHCDSSKPGR 208
FQ + V L W ++SKPGR
Sbjct: 221 -RFQGARVANSPLFWVADNTSKPGR 244
>gi|189348296|ref|YP_001941492.1| hypothetical protein BMULJ_05680 [Burkholderia multivorans ATCC
17616]
gi|189338434|dbj|BAG47502.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 337
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 31/199 (15%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + +A V W +GG A W + S + + + ++YVGVP
Sbjct: 58 DHGAQYFTARHPAFVAEVARWVAGGAAAPWAARVASIGSLGPR----ELLAPAQRYVGVP 113
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM + + L G+++ + E D W + + +L + V
Sbjct: 114 GMTAPARYLS--AGIDTMLETTI--IELTRDAQRWRLISAEHGALRMHHDAV-------- 161
Query: 137 PRFRDVTGRPPPLDLTF----APDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF--SF 190
+ PPP + P LAV + + P +A+M + +P GF +F
Sbjct: 162 -----IVAVPPPQAVALLRRAEPGLAVIAQRTEMRPAWAVMAQYGR----LPDPGFDAAF 212
Query: 191 QDSEVLSWAHCDSSKPGRS 209
+ L W D+SKPGRS
Sbjct: 213 VNVGPLGWIAHDTSKPGRS 231
>gi|422648207|ref|ZP_16711331.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330961745|gb|EGH62005.1| amine oxidase, flavin-containing protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 328
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPSLYNFHGGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG PGM++I +A+ + + F + + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGKPGMSAITRAM--RGDLPVSFSCRITDV--FRGEEHWNLLDAEGKSHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + + P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMEPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSWAHCDSSKPGR 208
+ ++G QDS L W + SKP R
Sbjct: 199 L-MQGCFVQDSP-LDWLARNRSKPER 222
>gi|114707631|ref|ZP_01440526.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
gi|114536875|gb|EAU40004.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
Length = 282
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 81/221 (36%), Gaps = 39/221 (17%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR +D + FDHGA FFT + V W G VA W
Sbjct: 1 MSTRRVDIDD-TCLQFDHGAQFFTARDPRFAKRVEGWVEAGHVARWP------------- 46
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWL-EDKNLWSVSGLDGQ 119
+G ++G P MN+ A+ V R E L D W L G
Sbjct: 47 -----EGQQDAWIGQPAMNAPLLAMAENLKVSVST-----RIETLTRDNGHWH---LHGG 93
Query: 120 SLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
+G+ A D VV+ P D T +A E PC+ +M AF
Sbjct: 94 GVGE----TAYDAVVVAVPAEQAVSLLAPQDAT----MAAYAESTRSKPCWTVMAAFDTR 145
Query: 180 LSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCT 220
+++ ++ + WA DSSK GR +R C + T
Sbjct: 146 VTASETG--PIRNRGAIEWAVRDSSKTGRE-DRECWVIHAT 183
>gi|422604190|ref|ZP_16676207.1| hypothetical protein PSYMO_03014 [Pseudomonas syringae pv. mori
str. 301020]
gi|330887849|gb|EGH20510.1| hypothetical protein PSYMO_03014 [Pseudomonas syringae pv. mori
str. 301020]
Length = 276
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 25/192 (13%)
Query: 19 GAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVNIQQDGMNKKYVGVP 76
GA +FT + V++W++ G VAEW L +F R+S ++VG P
Sbjct: 2 GAQYFTARDRRFATPVKQWQAQGHVAEWTPLLYNFHGGRLSPS------PDEQVRWVGEP 55
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM++I +A+ + + F + + W++ +G++ G F+ V+ + +
Sbjct: 56 GMSAITRAM--RGDLPVSFSCRITDV--FRGEQHWNLLDAEGENHGPFSHVI-----IAT 106
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + L AP LA + + ++P +A+ LAF PL + P++G QDS L
Sbjct: 107 PAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT-PMQGCFVQDSP-L 158
Query: 197 SWAHCDSSKPGR 208
W + SKPGR
Sbjct: 159 DWLARNRSKPGR 170
>gi|255072361|ref|XP_002499855.1| predicted protein [Micromonas sp. RCC299]
gi|226515117|gb|ACO61113.1| predicted protein [Micromonas sp. RCC299]
Length = 429
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 97/246 (39%), Gaps = 48/246 (19%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
S R +G M FDHGA FFT + A+ E ++ G VA W G+ + F+
Sbjct: 49 SSSRPVEVNGETMAFDHGAQFFTANDPKFKAVCEELKAKGYVARWDGVFGTLNAFDGVFI 108
Query: 62 ---NIQQDG-----------MNKKYVGVPGMNSICKALCHQPG--VESKFGVGVGRFEWL 105
++ G ++ VGVP +IC+ L G V + + V +
Sbjct: 109 PKRRVETMGPPRQDFFKLLTADEVLVGVPTNQAICEGLRALAGDDVTAHWHTTVTGLDLD 168
Query: 106 EDKNLWSVSGLDGQSL-------------GQFNGVVASDKNVV---SPRFRDVTGRPPPL 149
WS+SG++ + L G+ VV D +P V G P
Sbjct: 169 ASGKTWSLSGVNKRRLDEGRAGSKEKRLSGRNAAVVVCDVMAAREGTPGTCAVRGLPERG 228
Query: 150 DLTFAPDLAVKLEEIPVN-PCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHC------D 202
D A + ++P F+ MLAF +S P F D+ V++ +H D
Sbjct: 229 D---AANTWRAFAKVPERVGLFSCMLAFD---ASAPKPEF---DAAVVTGSHTIGLLVRD 279
Query: 203 SSKPGR 208
SSKPGR
Sbjct: 280 SSKPGR 285
>gi|425440174|ref|ZP_18820482.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389719438|emb|CCH96718.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 314
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 79/201 (39%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ LV W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENLVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + P +T P+ L I +PC +M + + L ++
Sbjct: 141 SAIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------APSTDIAWLGLDSSK 204
>gi|385331507|ref|YP_005885458.1| FAD dependent oxidoreductase [Marinobacter adhaerens HP15]
gi|311694657|gb|ADP97530.1| FAD dependent oxidoreductase [Marinobacter adhaerens HP15]
Length = 342
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 27/197 (13%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA +FT N D L + ++ W+ G F + K+ + Q+ +YVG+P
Sbjct: 61 DMGAQYFTSRNPDFLPFLHKFAGPESFGPWEGRFG-FQTNADKWESFPQE---TRYVGIP 116
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M +I +AL V ++ V R + WS+ G LG F+ V+ V +
Sbjct: 117 RMTAITRALSGHAHVVTE--TRVARLA--RNDQSWSLFSTAGSHLGDFDAVI-----VTA 167
Query: 137 P--RFRDVTGRPPPLDLTFAPDLAVKLEEIPVN---PCFALMLAFSEPLSSIPVKGFSFQ 191
P + RD+ LD LA L++ PV+ PC+A+ F P+S P
Sbjct: 168 PPAQARDLLAD-SSLDA-----LASYLDD-PVSRVLPCWAVAAHF--PVSPWPHHEGMRC 218
Query: 192 DSEVLSWAHCDSSKPGR 208
L W +SSKPGR
Sbjct: 219 KHPALFWVANNSSKPGR 235
>gi|302842207|ref|XP_002952647.1| hypothetical protein VOLCADRAFT_105639 [Volvox carteri f.
nagariensis]
gi|300261991|gb|EFJ46200.1| hypothetical protein VOLCADRAFT_105639 [Volvox carteri f.
nagariensis]
Length = 595
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD---------------- 54
G + FD+G F T T+ + LV EW G+VAEW+ LG +D
Sbjct: 118 GTDFQFDYGCQFLTATSPHMRRLVEEWLEAGVVAEWRPRLGVYDAARGVVKSGEELSAAE 177
Query: 55 --RVSKKFVNIQQDGMNKKYVGVPGMNS--ICKALCHQPGVESKFGV 97
V + YVGVP M + +C + PG + + V
Sbjct: 178 VLEVGSSRLPPLPPPGAPLYVGVPAMGALDVCTDMYPYPGTDDRLLV 224
>gi|289662806|ref|ZP_06484387.1| hypothetical protein XcampvN_06873 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 336
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 20/199 (10%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNK 70
G+ DHGA +FT + ++V W G+ A W+ + S+D
Sbjct: 51 GDHWQCDHGAQYFTARDPAFASVVDAWIDAGIAAPWQARIASWDGAQLS----HSHSALT 106
Query: 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130
+YVGVP M + + L + ++ + V + WSVS + F+ V+ +
Sbjct: 107 RYVGVPDMAAPARVLAVR--LDIRLSTEVHALQ--RSGQGWSVSCAQDTAAHMFDAVLLA 162
Query: 131 DKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSF 190
V +P + PP+ AP + + P +A++ F P+ P F
Sbjct: 163 ---VPTPNAAKLF---PPI----APAFSSIAPHAQMQPAWAVIAHFDGPVD--PGYDALF 210
Query: 191 QDSEVLSWAHCDSSKPGRS 209
++ L W +SSKP R+
Sbjct: 211 VNNGPLRWVARNSSKPARA 229
>gi|326389099|ref|ZP_08210681.1| putative deoxyribodipyrimidine photolyase [Novosphingobium
nitrogenifigens DSM 19370]
gi|326206699|gb|EGD57534.1| putative deoxyribodipyrimidine photolyase [Novosphingobium
nitrogenifigens DSM 19370]
Length = 320
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 78/210 (37%), Gaps = 39/210 (18%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + G FD GA +FTV + VREWE GL+ W
Sbjct: 47 MASRRIETPLGIAT-FDFGAQYFTVRDERFAFEVREWERAGLIQPWPA------------ 93
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVE-SKFGVGVGRFEWLEDKNLWSVSGLDGQ 119
+GVP MNSI K L + V S G+ R + W + +G
Sbjct: 94 ------AGPDALIGVPNMNSILKHLLARQEVHFSALVKGLKR-----EGRHWRLL-CEGH 141
Query: 120 SLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
F+ VV + + P+ DLA PC+ M F EP
Sbjct: 142 ESSLFDDVVLALP----------AEQTAPILTLHDFDLAQAALFARSQPCWTGMFVFPEP 191
Query: 180 LSSIPVKGFSFQDSEVLSWAHCDSSKPGRS 209
+ +D ++ WA D++KPGRS
Sbjct: 192 VRH---NADIIRDQGLIGWAARDNAKPGRS 218
>gi|425469622|ref|ZP_18848542.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389880491|emb|CCI38747.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 314
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + P +T P+ L I +PC +M A+ + L ++
Sbjct: 141 SVIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAAYGDSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------APSTDIAWLGLDSSK 204
>gi|335436715|ref|ZP_08559508.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
gi|335437381|ref|ZP_08560161.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
gi|334896167|gb|EGM34322.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
gi|334897678|gb|EGM35809.1| FAD dependent oxidoreductase [Halorhabdus tiamatea SARL4B]
Length = 335
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S N +FD GA + V + D+ +VR+ LV E + + FD + V
Sbjct: 37 RMASRRRNGCVFDFGANYLEVGDPDLEEIVRDAARSDLV-EIEPPVWRFDAAGE--VTAG 93
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ N ++ G G++ I + + G K GVGV E L+D W ++ +G +F
Sbjct: 94 ETPQNSRWTGRGGLDEIVRGMIDASGATLKEGVGVTHLERLDDG--WRLTTEEGDR--EF 149
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ VV + + + PL +LA+ + +IP + L F+ L + P
Sbjct: 150 DEVVLAVPTASASVLLETADWDAPL----REELAIAINQIPYRTMDTVALHFAFELET-P 204
Query: 185 VKGFSFQDSEV-LSWAHCDSSKPG 207
G ++S ++W + KPG
Sbjct: 205 YFGLVSEESVYDVAWVSNERHKPG 228
>gi|427428587|ref|ZP_18918627.1| hypothetical protein C882_4338 [Caenispirillum salinarum AK4]
gi|425881695|gb|EKV30379.1| hypothetical protein C882_4338 [Caenispirillum salinarum AK4]
Length = 339
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 33/219 (15%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWK---VNLG--SFDR 55
++ RR +EDG + FDHGA + T + A + G A W LG F R
Sbjct: 47 LATRR--AEDG-ALTFDHGAQYATARDPAFRAALEAAAEAGTAAPWDGRWAMLGEEGFTR 103
Query: 56 VSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG 115
VS ++VG PGM+ + KAL V GV + + + LW ++
Sbjct: 104 VSAS---------ETRWVGRPGMSGLVKALAADVAVTQ--GVRITALD-RDAAGLWRLTD 151
Query: 116 LDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
DG++ G ++ V + +P+ R++ G + F L + PC+A M A
Sbjct: 152 ADGRTHGPYHAVALT---APAPQAREMLGE---WEAAFP-----ALSRVRYAPCWAAMAA 200
Query: 176 FSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLC 214
+ PL +P +D VL A + KPGR+ C
Sbjct: 201 WEAPL-PLPFDMARLEDP-VLGLAGRNGGKPGRAPEADC 237
>gi|414868817|tpg|DAA47374.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 266
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 13/142 (9%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQF 124
+Y+GV GM + A+ + + + V R W+ LW + + + G++
Sbjct: 174 TPRYIGVNGMRPLADAMLPETDM-----IKVLRPCWISKLEPFNGLWRLFE-NEKPRGEY 227
Query: 125 NGVVASDKNVVSPRFRDVTGRP 146
+ VV + + R +G P
Sbjct: 228 DAVVIAHNGKCANRLLSTSGLP 249
>gi|414868815|tpg|DAA47372.1| TPA: hypothetical protein ZEAMMB73_111446 [Zea mays]
Length = 210
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 9 EDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM 68
+ G +++FDH A FFT ++ LV EW GLV EW +G + F I +
Sbjct: 117 DGGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLVREWSGLIGELE-AGGCFRPIPS--L 173
Query: 69 NKKYVGVPGMNSICKAL 85
+Y+GV GM + A+
Sbjct: 174 TPRYIGVNGMRPLADAM 190
>gi|425450461|ref|ZP_18830287.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
gi|389768693|emb|CCI06265.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
7941]
Length = 314
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 79/201 (39%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + P +T P+ L I +PC +M + + L ++
Sbjct: 141 SAIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------APSTDIAWLGLDSSK 204
>gi|338999058|ref|ZP_08637713.1| amine oxidase [Halomonas sp. TD01]
gi|338764079|gb|EGP19056.1| amine oxidase [Halomonas sp. TD01]
Length = 354
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 80/216 (37%), Gaps = 32/216 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ D GA FTV N V EW++ G VA W + + + +
Sbjct: 52 RMSSKRRPSAALDLGAQAFTVRNERFANKVAEWQTAGCVAIWPTS--RYQASASGWQTHN 109
Query: 65 QDGMNKKYVGVPGMNSICKALCHQ----PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
D + +Y G P M+++ + L P + F+ + W + +G
Sbjct: 110 DDQL--RYTGAPRMSAVTRHLADTLNALPNAAITLETHITAFD--KTAAGWQLHDTNGSI 165
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPP----LDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G F+ VV S PPP L + P L+ E P C+A + F
Sbjct: 166 HGPFDVVVIS--------------APPPQAKALLAEWEPTLSAACEAKPQRGCWAGWVIF 211
Query: 177 SEPLSSI----PVKGFSFQDSEVLSWAHCDSSKPGR 208
+PL I P VL A + +KPGR
Sbjct: 212 EKPLPPITQVAPAWHTVHTQHSVLRLASRNHTKPGR 247
>gi|219124354|ref|XP_002182470.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405816|gb|EEC45757.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 523
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 89/237 (37%), Gaps = 56/237 (23%)
Query: 13 EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKY 72
++ +DHG FF V W GG+ EW F QD + +
Sbjct: 57 KLEWDHGCQFFRADTERFRQKVEGWIEGGMCQEW-------------FGKFGQDSSSADF 103
Query: 73 VGVP-------GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG------- 118
G+P GM + +L ++ G+ V E + +W + G+ G
Sbjct: 104 FGLPGKPPFFVGMKGLIDSLLNEEGIHVYSDQRVSSLE--REGKVWKLLGVHGEAAFHDT 161
Query: 119 ------QSLGQFNGVVASDKNVVSPRF----RDVTGRPPPLDLTFAPDLAVKLEEIPVN- 167
Q +G NG A VS F R G P A ++ E +
Sbjct: 162 SVEAKPQPIGSTNGYDAVVLTDVSSSFDSWHRASAGVPAA--------FAARVRERAGSR 213
Query: 168 -PCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWT 223
P F+ M+AF +P S IP +F +E + +A +SKPG A L ++C WT
Sbjct: 214 VPLFSAMVAFEQP-SQIPFDATAFDQNESIWFAAKTNSKPGMGA--LEQEC----WT 263
>gi|359785438|ref|ZP_09288589.1| amine oxidase [Halomonas sp. GFAJ-1]
gi|359297170|gb|EHK61407.1| amine oxidase [Halomonas sp. GFAJ-1]
Length = 339
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 83/218 (38%), Gaps = 36/218 (16%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ + D GA FTV + V+EW+ G A W N + S +
Sbjct: 36 RMSSKRRPQATLDLGAQAFTVRDPRFAQAVKEWQLAGCAALWPAN--RYQASSSGWQTHN 93
Query: 65 QDGMNKKYVGVPGMNSICK----ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
D + +Y G P M++I + AL P F + FE D W + G +
Sbjct: 94 DDQL--RYAGAPRMSAITRHMAEALSSLPNTTLAFETPIAAFEKTSDG--WQLIDQHGAT 149
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPP----LDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G F V+ S PPP L + LA ++ P C+A F
Sbjct: 150 YGPFAAVIISA--------------PPPQAYALVADWDDALAAACKDKPQRGCWAGWAIF 195
Query: 177 SEPLSSIPVKGF------SFQDSEVLSWAHCDSSKPGR 208
+ PL P++G E L A +SSKPGR
Sbjct: 196 ASPLP--PIEGVVPNWHTVETGHEALRLATRNSSKPGR 231
>gi|359394407|ref|ZP_09187460.1| Dehydrosqualene desaturase [Halomonas boliviensis LC1]
gi|357971654|gb|EHJ94099.1| Dehydrosqualene desaturase [Halomonas boliviensis LC1]
Length = 356
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 83/225 (36%), Gaps = 40/225 (17%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ D GA F+V + D V EW + G +A W + S +
Sbjct: 49 RMSSKRRPSATLDLGAQAFSVRDVDFQRAVDEWLAAGCIAAWPTRT---YQASSRGWQAH 105
Query: 65 QDGMNKKYVGVPGMNSICK----ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
DG K+Y G P M+++ + +L QP E G + N W + G DG
Sbjct: 106 NDG-QKRYTGAPRMSALTRHMADSLTAQPNAELHTGTPIAALN--PSPNGWMLVGADGVH 162
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAP---DLAVKLEEIPVNPCFALMLAFS 177
G ++ +V ++ PP P LA C+ F
Sbjct: 163 HGPYDQIV-------------ISAPPPQTHALVKPWDDALAAACLTRKQRACWVGWAIFD 209
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHC-----------DSSKPGRSAN 211
PL +IP G QD ++ +AH + +KPGR A
Sbjct: 210 GPLPAIP--GVD-QDWQMARFAHPVLYPVLNIVSRNQTKPGRDAQ 251
>gi|418521633|ref|ZP_13087675.1| hypothetical protein WS7_11522 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410702168|gb|EKQ60677.1| hypothetical protein WS7_11522 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 344
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RSQSALTRYVGVP 120
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W VS + + V+ + V +
Sbjct: 121 EMPAPARTLAAQLDVRLCAEVHALR----RSRQGWRVSVSQDAAEPLLDTVLLA---VPA 173
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P P F ++ L
Sbjct: 174 PNAAALVAQAAPALRTIA-------EQVRMQPAWAVMARFDAPTD--PGYDALFVNAGAL 224
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 225 RWVARNSSKPARA 237
>gi|86608160|ref|YP_476922.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556702|gb|ABD01659.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 366
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 23/208 (11%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR G + DHGA + T ++ V+E GL+AEW +L DR +
Sbjct: 59 MATRR-VEHAGQTVPVDHGAQYLTADSDGFYRWVKELLGLGLLAEWTRSLHVLDREGLRP 117
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLD 117
+ + +YV GM + K L V ++ V + K L W + +
Sbjct: 118 EDPNDE--KPRYVCPQGMTMLAKHLAAPLSVHTQTRV-------VSLKPLATSWQLRAEN 168
Query: 118 GQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
GQ V + P R+ + A +L LE PC A++ +S
Sbjct: 169 GQCYEAAALVATIPAPQLLPLLRE--------GIPSAENLLPLLESAQYQPCLAVLAGYS 220
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSK 205
E + P KG + +L+W DSSK
Sbjct: 221 E--HTPPWKGIKCLEDPMLAWLGLDSSK 246
>gi|443473434|ref|ZP_21063458.1| Amine oxidase [Pseudomonas pseudoalcaligenes KF707]
gi|442904171|gb|ELS29287.1| Amine oxidase [Pseudomonas pseudoalcaligenes KF707]
Length = 327
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 34/232 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + +V++W G VAEW S N
Sbjct: 40 RMASKRTDAGSVDLGAQYFTARDRRFAEVVQQWRDRGWVAEW----------SPSLYNAS 89
Query: 65 QDGM------NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG 118
+ G+ ++VG P M++I +AL + F + E + W + +G
Sbjct: 90 EGGLLPSPDEQIRWVGTPRMSAITRALL--GALPVNFACRI--TEVFRGERHWGLQDAEG 145
Query: 119 QSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE 178
S G F+ V+ + + + + A D P +A+ L FSE
Sbjct: 146 LSHGPFSHVIIATPAPQAAALLAAAPKLAGAAASVAMD-----------PTWAVALGFSE 194
Query: 179 PLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCT-NWTSKAFRS 229
L + V+G QD+ L W + SKPGR ++ + T NW+ + S
Sbjct: 195 TLDT-QVEGCFIQDNP-LDWVARNRSKPGRESSLDTWVLHATSNWSRQHLDS 244
>gi|294667313|ref|ZP_06732532.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292602865|gb|EFF46297.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 336
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGVP
Sbjct: 57 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTRLR----RPQSALTRYVGVP 112
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M + + L Q V V R + W V+ + F+ V+ + V +
Sbjct: 113 EMTAPARTLAAQLDVRLCAEVHALR----RSRQGWRVAVSQDAAEPLFDTVLLA---VPA 165
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P + + P T A E++ + P +A+M F P+ P F ++ L
Sbjct: 166 PSAAALLAQAAPALRTIA-------EQVRMQPAWAVMARFDVPID--PGYDALFVNAGAL 216
Query: 197 SWAHCDSSKPGRS 209
W +SSKP R+
Sbjct: 217 RWVARNSSKPART 229
>gi|390440103|ref|ZP_10228455.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389836469|emb|CCI32579.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 314
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E ++K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENHQEK--WFLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + P +T P+ L I +PC +M + + L ++
Sbjct: 141 SVIVLA---IPAPQAALLLENSP---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------APSTDIAWLGLDSSK 204
>gi|90416921|ref|ZP_01224850.1| hypothetical protein GB2207_06658 [gamma proteobacterium HTCC2207]
gi|90331268|gb|EAS46512.1| hypothetical protein GB2207_06658 [gamma proteobacterium HTCC2207]
Length = 336
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 24/183 (13%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FDHGA F T N+ A V EW G+ EW + + +Y GV
Sbjct: 61 FDHGAQFMTARNSRFQASVAEWIEAGVAEEWYSSYPG------------HPNGHPRYRGV 108
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M ++ K L V V ++ LWS + +G+++ ++ S
Sbjct: 109 PTMTAVAKYLATDMNVLRTTRVD----SITQEDRLWSAALDNGETVSAKALLITSPV--- 161
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
P+ D+ ++ D +L+ I C A+M P ++IPV G + D
Sbjct: 162 -PQTIDLLASG---NIQIPADKQARLDRIDYEACIAVMAVLDGP-TAIPVPGATAFDDGP 216
Query: 196 LSW 198
+ W
Sbjct: 217 IGW 219
>gi|147823105|emb|CAN66332.1| hypothetical protein VITISV_000600 [Vitis vinifera]
Length = 463
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D ++FDH A FFTV + LV W GLV +W+ +G + V +FV + +
Sbjct: 7 DPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLVQQWQGMIGELE-VGGQFVPL--PSLP 63
Query: 70 KKYVGVPGMNSICKALCHQ 88
+Y+GV GM + ++ Q
Sbjct: 64 PRYIGVNGMRPLADSILSQ 82
>gi|407939961|ref|YP_006855602.1| hypothetical protein C380_16345 [Acidovorax sp. KKS102]
gi|407897755|gb|AFU46964.1| hypothetical protein C380_16345 [Acidovorax sp. KKS102]
Length = 344
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 33/220 (15%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR G DHGA +FT + A V W+ G+ A W L SFD
Sbjct: 46 MSTRRAEDAAGPWQC-DHGAQYFTARDPQFRAEVARWQQAGVAALWDARLASFDGA---- 100
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALC---HQPG--VESKFGVGVGRFEWLEDKNLWSVSG 115
V +++VG P M S Q G +++ V + E + + WS
Sbjct: 101 VWTTPATPLERFVGTPRMTSPAGWFVQGLQQAGDRALAQWQTTVQKLE--RNADGWS--- 155
Query: 116 LDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP-----PLDLTFAPDLAVKLEEIPVNPCF 170
+++++ + S R+ V P PL AP A + +
Sbjct: 156 -----------IISAEHGLHSQRYSAVLLAVPAPQAVPLLQPVAPTGAAVAASARMRGSW 204
Query: 171 ALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSA 210
A+M+ P+ ++ G +F ++ L W DSSKPGR+A
Sbjct: 205 AVMVRCPAPV-ALAWDG-AFINTGPLRWVARDSSKPGRTA 242
>gi|456063712|ref|YP_007502682.1| FAD dependent oxidoreductase [beta proteobacterium CB]
gi|455441009|gb|AGG33947.1| FAD dependent oxidoreductase [beta proteobacterium CB]
Length = 331
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 83/212 (39%), Gaps = 29/212 (13%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ E DHGA +FT + V+ W A W L ++ + + N Q
Sbjct: 45 RMSTRRSEEWSTDHGAQYFTARDPRFAQEVQRWIQASAAAVWNPRLRVYESKTWRESNSQ 104
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD-GQSLGQ 123
+ +YVG P MNS K L G+ ++ + + E + K W++ L+ G+
Sbjct: 105 E----IRYVGTPNMNSPGKYLA--KGLSIQYERTISQLERKDGK--WNLKCLEIGEITAS 156
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIP----VNPCFALMLAFSEP 179
++ VV + P P DL + I + C+ +M P
Sbjct: 157 YDFVVLAI--------------PAPQASALLKDLDTRASHITSSAQMKACWTMMAHL--P 200
Query: 180 LSSIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
+ +F + E++SW + SKP R N
Sbjct: 201 NQTRADFDAAFINQEIISWICQNGSKPMRQGN 232
>gi|21230738|ref|NP_636655.1| hypothetical protein XCC1281 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769266|ref|YP_244028.1| hypothetical protein XC_2960 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992417|ref|YP_001904427.1| hypothetical protein xccb100_3022 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112332|gb|AAM40579.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574598|gb|AAY50008.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734177|emb|CAP52385.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 335
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 24/206 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + G + DHGA +FT + D +A V W + A W L S+D + +
Sbjct: 45 RMRALAGQQWHCDHGAQYFTARDPDFMAAVGAWVANDCAAPWLARLASWDGSTLQ----P 100
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
G +++VGVP M + AL G++ + + + ++ W++ G
Sbjct: 101 SLGTLQRFVGVPDMAAPAHALA--VGLDLRTETRIDALQ--RTEHGWALRGAGLPEAVPA 156
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+V + + + T A DLA + + P +A++ F+ P+ +
Sbjct: 157 ELLVLALPAPQAAALLE----------TAASDLARVAARVRMQPAWAVVARFTAPVEA-- 204
Query: 185 VKGFS--FQDSEVLSWAHCDSSKPGR 208
G+ F ++ L W +SSKPGR
Sbjct: 205 --GYDGLFVNAGALRWIARNSSKPGR 228
>gi|86604979|ref|YP_473742.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-3-3Ab]
gi|86553521|gb|ABC98479.1| oxidoreductase, FAD-binding [Synechococcus sp. JA-3-3Ab]
Length = 370
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 18/238 (7%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR G + DHG + T ++ ++E GL+ EW +L DR +
Sbjct: 57 MATRR-VEHAGQTVPVDHGVQYLTADSDSFYRWLKELLGLGLLREWTRSLHLLDREGLRP 115
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ + +Y+ GM ++ K L + ++ V R W + +GQ
Sbjct: 116 ED--SNAEKPRYICPQGMTTLAKQLATSLSIHTQTRVVGLR----PLATTWQLQAENGQC 169
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V+A + P ++ G PP +L P A PC A++ +S+
Sbjct: 170 YEAAAVVMAIPAPQLLPLLQE--GIPPADNLLSLPGSAA------YQPCIAVLAGYSKST 221
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSK---AFRSNIKKGG 235
P KG +L+W DSSK + L W+S+ A + ++K G
Sbjct: 222 PLPPWKGIKCLQDPMLAWLALDSSKRLQPLPPLVVLHGGAEWSSRYLDAGPAELEKAG 279
>gi|421527721|ref|ZP_15974298.1| FAD dependent oxidoreductase [Pseudomonas putida S11]
gi|402214803|gb|EJT86123.1| FAD dependent oxidoreductase [Pseudomonas putida S11]
Length = 329
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ D GA +FT + + V++ GL N GS + VN
Sbjct: 40 RMASKRSEAGALDLGAQYFTARDRRFVEQVQQ---SGLPPVGPRN-GSHSCTTTAMVNSA 95
Query: 65 QDGMNKKY-VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ 123
+++ VP M++I + L V FG + E K W + +G S G
Sbjct: 96 PPPTSRRAGWAVPRMSAITRGLLKD--VTVNFGCRIA--EVFRGKQYWHLQDTEGCSHGP 151
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
++ VV + V +P+ PL L P LA + + P +A+ LAF PL +
Sbjct: 152 YSRVVIA---VPAPQAT-------PL-LAATPKLAAVAAGVQMEPTWAVALAFQTPLDT- 199
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
P++G QD+ L W + SKPGR
Sbjct: 200 PMQGCFVQDNP-LDWLARNRSKPGR 223
>gi|304392272|ref|ZP_07374214.1| deoxyribodipyrimidine photolyase [Ahrensia sp. R2A130]
gi|303296501|gb|EFL90859.1| deoxyribodipyrimidine photolyase [Ahrensia sp. R2A130]
Length = 324
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 44/213 (20%)
Query: 4 RRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNI 63
R T +E+ FDHGA + V +++ LA + V LG V V
Sbjct: 45 RMATRRIDDEVAFDHGAQYARVRSDEFLAFL-------------VGLGDSAGVWTPRVKD 91
Query: 64 QQDGMNKK-YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
+K YVGV GMN + + L + V+ + V + G DG +
Sbjct: 92 DTVATDKPLYVGVSGMNRLLEPLRER--VDLRLNTLVSGL----------LVGADGVIIT 139
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAV--KLEEIPVNPCFALMLAFSEPL 180
+G S V+ T P + F D A+ + + V+PC++LM+ F +PL
Sbjct: 140 LEDGSTESFDRVIC------TIPVPQARVLFGTDQALVDAMSVVEVDPCWSLMVTFEQPL 193
Query: 181 SSIPVKGFSFQD----SEVLSWAHCDSSKPGRS 209
G +F S+ L W ++SKPGR+
Sbjct: 194 ------GVTFDAWRNVSDELGWVARNTSKPGRN 220
>gi|384082266|ref|ZP_09993441.1| amine oxidase [gamma proteobacterium HIMB30]
Length = 311
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 24/205 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA FFTV + ALV S G V WK +G+F + + + +++VG P
Sbjct: 39 DIGAQFFTVRDPRFQALVELAHSAGAVQPWKPRMGTF----QSSIPVDSPDTQRRFVGAP 94
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
MN++ + L +ES+ + R D + + ++ G +V + + ++
Sbjct: 95 YMNALGRFLTQSVRIESQTRIDTIR----RDGSGFILTTTAGTEYSAEQVLVTTPVDQMA 150
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI---PVKGFSFQDS 193
DL ++A + + + P + +++ + L++ P+ D
Sbjct: 151 -------------DLLAQFEIAPIVTQFTMEPTWTTVVSSGQQLTTRMREPIDACFGGDH 197
Query: 194 EVLSWAHCDSSKPGRSANRLCKDCN 218
+V + + SKPGR ++ + +
Sbjct: 198 DVFDFISVERSKPGRDSDLIVVQAS 222
>gi|334119311|ref|ZP_08493397.1| amine oxidase [Microcoleus vaginatus FGP-2]
gi|333458099|gb|EGK86718.1| amine oxidase [Microcoleus vaginatus FGP-2]
Length = 355
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA + + + V L+ ++ W ++G F + + + YV
Sbjct: 51 DHGARYLELQGDAVQGLIEALVDRDILKLWTDSVGEFRQGKLSAI------ASSCYVAPA 104
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMN+I K L +E FG V D +W +S + +D N+ +
Sbjct: 105 GMNAIGKYLAED--LEIWFGRRVQAIS-TTDNQMWHLS------------LEVTDDNLQT 149
Query: 137 PR----FRDVTGRPPPLDLTF-------APDLAVKLEEIPVNPCFALMLAFS----EPLS 181
P+ V P P L F PD KL + +PC +M +S + LS
Sbjct: 150 PQELIAKAVVVAIPAPQALMFLNSEIGFKPDFLDKLRSVDYDPCITVMAGYSAAEQQDLS 209
Query: 182 SI--PVKGFSFQDSEVLSWAHCDSSK 205
++ K SF D+ L+W DSSK
Sbjct: 210 NLNPQWKSVSFPDNSDLAWVGLDSSK 235
>gi|302848563|ref|XP_002955813.1| hypothetical protein VOLCADRAFT_121465 [Volvox carteri f.
nagariensis]
gi|300258781|gb|EFJ43014.1| hypothetical protein VOLCADRAFT_121465 [Volvox carteri f.
nagariensis]
Length = 464
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 86/223 (38%), Gaps = 23/223 (10%)
Query: 11 GNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVN--LGSFDRVSKKFVNIQQ--- 65
G + FDHG + T A++ + G VA+W + +G+ V++
Sbjct: 89 GERLTFDHGCQYLTARTPLFGAVLGDLHDRGAVAQWGLGRPVGAAHLAEDGTVDMSTFVA 148
Query: 66 DGMNKKYVGVPGMNSICKALCHQPG---VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
D +VG P +++ +AL + G + V V W +KN+W+ ++
Sbjct: 149 DTGKTMWVGNPTNSAVGRALAARVGSQRLAPLTAVRVDELVWNPEKNVWTCRARRAGAIN 208
Query: 123 QFNGVVASDKNVV------SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G +D + +G + P+L EI N C+AL++A
Sbjct: 209 TGGGGGGTDIDAAVANSSGGSGGSHGSGDGDGAESGLVPELVAAAREIRSNVCWALLVAL 268
Query: 177 SEP---------LSSIPVKGFSFQDSEVLSWAHCDSSKPGRSA 210
++ LS G + ++W DSSKPGR A
Sbjct: 269 NKKIDVPFDGALLSRPDASGGAMAQYGPIAWVARDSSKPGRPA 311
>gi|425456990|ref|ZP_18836696.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
gi|389801784|emb|CCI19099.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9807]
Length = 314
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF TV AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTVQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVNRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M + + L ++
Sbjct: 141 SVIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYGDSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------TPSTAIAWLGLDSSK 204
>gi|425434511|ref|ZP_18814980.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
gi|389675999|emb|CCH94927.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9432]
Length = 314
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV GMNS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGMNSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M + + L ++
Sbjct: 141 SAIVLA---IPAPQAALLLENSC---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 191 -------PSTDIAWLGLDSSK 204
>gi|120554402|ref|YP_958753.1| FAD dependent oxidoreductase [Marinobacter aquaeolei VT8]
gi|120324251|gb|ABM18566.1| FAD dependent oxidoreductase [Marinobacter aquaeolei VT8]
Length = 341
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 79/196 (40%), Gaps = 25/196 (12%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA +FT N + W W G + + Q ++VG P
Sbjct: 61 DIGAQYFTSRNPGFTRFLDRWAGPRSYQSWNARFG----YQTERGSWQAFPEEHRFVGTP 116
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M +I +AL + S GV + R ++ + W ++G DGQ F+ VV + +
Sbjct: 117 RMTAISRALSEHITLAS--GVRIVRLS--KEDSKWQLTGTDGQHYDGFDQVVITAPPAQA 172
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQ----D 192
+G LD A LA + I PC+A+ F+ + F F +
Sbjct: 173 QELLRDSG----LD-AMAEGLAGHVGNIL--PCWAVAAHFNRSVD------FPFDAARPN 219
Query: 193 SEVLSWAHCDSSKPGR 208
S+VL W +SSKPGR
Sbjct: 220 SDVLFWVANNSSKPGR 235
>gi|149374756|ref|ZP_01892529.1| hypothetical protein MDG893_06860 [Marinobacter algicola DG893]
gi|149360645|gb|EDM49096.1| hypothetical protein MDG893_06860 [Marinobacter algicola DG893]
Length = 337
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 22/194 (11%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA +FT+ N A + +G W G + S ++ Q+ +YVGVP
Sbjct: 61 DIGAQYFTIRNPAFSAFLSR-HAGDSFGPWSGRFG-YQISSGQWEPFPQEA---RYVGVP 115
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M +I + L V+++ + + W + +G+S G F+ V+ V +
Sbjct: 116 RMTAITRGLSTAADVQAQTRID----SLVRHDRQWLMKDTEGESYGPFDAVI-----VTA 166
Query: 137 P--RFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSE 194
P + RD+ L+ D+ + I PC+A + F + L P Q+
Sbjct: 167 PPAQARDLFSNSTLTALS--DDIQDHVSHI--QPCWATAVYFQQALEQ-PYDAMRCQNP- 220
Query: 195 VLSWAHCDSSKPGR 208
VL W ++SKPGR
Sbjct: 221 VLEWIANNTSKPGR 234
>gi|416907317|ref|ZP_11931044.1| FAD dependent oxidoreductase [Burkholderia sp. TJI49]
gi|325528956|gb|EGD05982.1| FAD dependent oxidoreductase [Burkholderia sp. TJI49]
Length = 337
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSF-DRVSKK 59
MS RR DG + DHGA +FT + +A + W +GG A W + S R +
Sbjct: 47 MSTRRA---DGWQA--DHGAQYFTAQHPAFVAEISRWVAGGAAAPWAARVASIGSRWPRA 101
Query: 60 FVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ 119
+ Q ++VGVPGM + + L G+E+ + + D++ W + + +
Sbjct: 102 LLAPAQ-----RFVGVPGMTAPARHLS--AGIETVPETTITGL--MRDEHGWRLISSEHR 152
Query: 120 SLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179
+L + VV V P + V PL P LAV + + P +A+M
Sbjct: 153 ALDARHDVVI----VAVPAPQAV-----PLLQRAEPGLAVIAQRTGMRPAWAVMAQCGH- 202
Query: 180 LSSIPVKGF--SFQDSEVLSWAHCDSSKPGRS 209
+P GF +F +S L W D+SKPGR+
Sbjct: 203 ---LPNPGFDAAFVNSGPLGWIAHDTSKPGRT 231
>gi|126668272|ref|ZP_01739232.1| hypothetical protein MELB17_13722 [Marinobacter sp. ELB17]
gi|126627298|gb|EAZ97935.1| hypothetical protein MELB17_13722 [Marinobacter sp. ELB17]
Length = 358
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 45/207 (21%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDG-------MN 69
D G +FT N D L + + V W LG QQD
Sbjct: 68 DMGGQYFTTRNPDFLPFLHQHAGEQTVVPWHGLLG-----------YQQDNGDWSEFPAE 116
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
+YVG P M +I + L G+ + V R W + DGQ+LG F+ V+
Sbjct: 117 PRYVGAPRMTAITRGLS--AGLNVQAQTRVARLHRDSQVKKWHLQDADGQNLGAFDQVI- 173
Query: 130 SDKNVVSP--RFRDVTGRPPPLDLTFAPDLAVKLEEI--PVNPCFALMLAFSEPLSSIPV 185
+ +P + R++ L + A LA +L + PC+A+ + FS + P
Sbjct: 174 ----ITAPPAQAREL------LADSSAAQLATELNTAVSQILPCWAVAVKFST--NPWP- 220
Query: 186 KGFSFQDSEV----LSWAHCDSSKPGR 208
FQ + V L W ++SKPGR
Sbjct: 221 ---RFQGARVANSPLFWVADNTSKPGR 244
>gi|358448961|ref|ZP_09159453.1| FAD dependent oxidoreductase [Marinobacter manganoxydans MnI7-9]
gi|357226756|gb|EHJ05229.1| FAD dependent oxidoreductase [Marinobacter manganoxydans MnI7-9]
Length = 342
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 25/197 (12%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA +FT N D L +R++ WK G F+ ++++ ++ ++VG P
Sbjct: 61 DMGAQYFTSRNPDFLPFLRKFAGDETFEIWKGRFG-FETAAREWEPFPEEA---RFVGTP 116
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M +I +AL + ++ VG + + WSV G LG F+ V+ + +
Sbjct: 117 RMTAITRALSAHARLVAETRVG----KLARNDQSWSVFDDAGSHLGDFHQVIITAPPAQA 172
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVN---PCFALMLAFSEPLSS-IPVKGFSFQD 192
+G +LA L++ PV PC+A+ F P+S + +G Q
Sbjct: 173 RELMVNSG---------LNELASHLDD-PVKRVLPCWAVAAHF--PVSPWLHHEGMRCQH 220
Query: 193 SEVLSWAHCDSSKPGRS 209
L W +SSKPGR+
Sbjct: 221 P-ALFWVANNSSKPGRN 236
>gi|318041924|ref|ZP_07973880.1| hypothetical protein SCB01_09444 [Synechococcus sp. CB0101]
Length = 398
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
Query: 13 EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGM--NK 70
++ +HGAP F +T + L+ GG + ++ +GS D + I D +
Sbjct: 58 QLALNHGAPLFNITASPEPQLLEPLRRGGWITRFQGAIGSLDEHGQLGAAIANDPLCSGT 117
Query: 71 KYVGVPGMNSICKAL--CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVV 128
+ G P M+ +C+ L Q + G N W++ G G++L + +V
Sbjct: 118 LWQGSPQMDHVCRGLLALAQEAAPTPLISGTLVRHLEATSNGWTLRGQQGETLLHCSWLV 177
Query: 129 ASDKNVVSPRFRDVTG 144
S + PR + V G
Sbjct: 178 LSGTLLAHPRCQTVFG 193
>gi|257053846|ref|YP_003131679.1| FAD dependent oxidoreductase [Halorhabdus utahensis DSM 12940]
gi|256692609|gb|ACV12946.1| FAD dependent oxidoreductase [Halorhabdus utahensis DSM 12940]
Length = 335
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR N +FD GA + V + D+ ++ + +G + E + + FD +
Sbjct: 38 MASRRR-----NGCVFDFGANYLEVADPDLEEVIED-AAGEKLVEIEPPVWRFDAAGE-- 89
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ N ++ G G++ I + + + G + GVGV E L+D W V+ G+
Sbjct: 90 ITPGDTPQNSRWTGRGGLDEIVRGMINASGATLEDGVGVTHLERLDDG--WRVTTEAGER 147
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+F+ +V + + + PL +LA+++ +IP + L F+ L
Sbjct: 148 --EFDAIVLAVPTASASVLLETADWDAPL----REELAIEINQIPYRTMDTVALHFAFEL 201
Query: 181 SSIPVKGFSFQDSEV-LSWAHCDSSKPGR 208
+ P G ++S ++W + KPG
Sbjct: 202 ET-PYFGLVSEESVYDVAWVSNERHKPGH 229
>gi|103486488|ref|YP_616049.1| hypothetical protein Sala_0999 [Sphingopyxis alaskensis RB2256]
gi|98976565|gb|ABF52716.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 320
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 19/86 (22%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
M+ RR + G E+ FDHGA FTV + D A V WE+ G A W
Sbjct: 40 MAARRAATPRG-EIAFDHGATHFTVRSADFRARVDRWEAAGCAAPWP------------- 85
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALC 86
D ++GVP MN+ K +
Sbjct: 86 -----DAGQDAWIGVPTMNAPLKHMA 106
>gi|425448182|ref|ZP_18828161.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
gi|389731111|emb|CCI04798.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9443]
Length = 325
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + E+ DHG PF T+ AL+ LV W FD
Sbjct: 47 RRVNRANQEIAVDHGLPFLTIQGEKTAALIDNLLRENLVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M +++ L ++
Sbjct: 141 SVIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYADSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------TPSTAIAWLGLDSSK 204
>gi|333368027|ref|ZP_08460249.1| NAD/FAD-dependent oxidoreductase family protein [Psychrobacter sp.
1501(2011)]
gi|332977968|gb|EGK14712.1| NAD/FAD-dependent oxidoreductase family protein [Psychrobacter sp.
1501(2011)]
Length = 389
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 40/251 (15%)
Query: 1 MSQRRETSEDGNEML--FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRV-- 56
++ R +T ED + FD GA FFT + ++ W + G++ W + +
Sbjct: 64 LATRYKTLEDNRDQQWQFDFGAQFFTAKSQSFQDYLQPWLAQGVIEPWLAKTATINSTTA 123
Query: 57 -SKKFVNIQQDGMNKKYVGVPGMNSICKALC--------HQPGVESKFGVGVGRFEWLED 107
S+ + Q D +Y+G P M S + L H + E +
Sbjct: 124 PSEIQITGQWDSDQPRYIGSPKMTSFGRHLATLLKHTEIHYKTRVAPLEQSEQTIEHTQS 183
Query: 108 KNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI--- 164
N S+ ++G LG F+ V+ + +P+ + ++L D V L+ I
Sbjct: 184 NNKTSLVDIEGNDLGVFDWVICT-----APQQQ-------AIELLQQTDF-VHLDRIKQP 230
Query: 165 PVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDS---------SKPGRSANRLCK 215
+ C+ LML + E LS +P + S +VL D+ KPGR A
Sbjct: 231 KMLACYTLMLGW-ESLSDLP-QTLSHAQWDVLQVNEADAIVNRVFVEHHKPGREAILPSV 288
Query: 216 DCNCTNWTSKA 226
+ TN S+A
Sbjct: 289 TVHATNQWSEA 299
>gi|352105731|ref|ZP_08960938.1| oxidoreductase [Halomonas sp. HAL1]
gi|350598308|gb|EHA14430.1| oxidoreductase [Halomonas sp. HAL1]
Length = 349
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 82/219 (37%), Gaps = 32/219 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +S+ D GA F+V + D V W S G +A W + + S
Sbjct: 47 RMSSKRRPSATLDLGAQAFSVRDADFQRAVDTWLSIGCIASWPT---ATYQASPNGWQAH 103
Query: 65 QDGMNKKYVGVPGMNSICKALCHQ----PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
DG K+Y G P M+++ + L P G + + ++ W + G +
Sbjct: 104 NDG-QKRYAGAPRMSALTRHLADSLTALPQAALHTGTSITSLK--RNQKGWQLVAAGGMT 160
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPP----LDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G ++ VV S PPP L + DLA + C+A F
Sbjct: 161 HGPYDQVVIS--------------APPPQAHALLAMWDDDLATACQTRKQRACWAGWAIF 206
Query: 177 SEPLSSIPVKGFSFQDSEV----LSWAHCDSSKPGRSAN 211
PL +IP +Q + V L + +KPGR+A
Sbjct: 207 DGPLPAIPGVDPDWQMARVAHPALHIVSRNQTKPGRAAQ 245
>gi|436837502|ref|YP_007322718.1| hypothetical protein FAES_4125 [Fibrella aestuarina BUZ 2]
gi|384068915|emb|CCH02125.1| hypothetical protein FAES_4125 [Fibrella aestuarina BUZ 2]
Length = 345
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 41/192 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R D DHGA +F+ + ++ ALV W++ GLV EW + D S +
Sbjct: 58 RRLGRDAEASRADHGAQYFSARSPELQALVHNWQAQGLVQEWHIE--QSDPASFQ----- 110
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQ 123
+ +Y GM+ + K L G++ + G R +L + W V G +L
Sbjct: 111 ----HPRYAVTGGMSQLAKQLAQ--GLDVRTG---ERATYLTQTDTGWQVRCDSGLTL-- 159
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEE--------IPVNPCFALMLA 175
++D +++ P P + + V L E I PC A+ML
Sbjct: 160 -----SADALLLT--------LPAPQAIALLNESGVTLAEADQQALTSIHYEPCLAVMLR 206
Query: 176 FSEPLSSIPVKG 187
++P S +P G
Sbjct: 207 LNQP-SQLPKPG 217
>gi|119492085|ref|ZP_01623538.1| FAD dependent oxidoreductase [Lyngbya sp. PCC 8106]
gi|119453295|gb|EAW34460.1| FAD dependent oxidoreductase [Lyngbya sp. PCC 8106]
Length = 344
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 26/205 (12%)
Query: 12 NEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKK 71
+++ DHG + T L+++ + ++ W + F K +Q
Sbjct: 49 SDICVDHGVRYLAATGEHTQNLIKQLTATNVLELWTDKIYGF-----KENQLQSLQPQSC 103
Query: 72 YVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131
Y+ GMNS+ K L G++ F V R E+K W +S + A++
Sbjct: 104 YIAPSGMNSVGKELA--VGLDIWFNRRVQRLTPTENKT-WYLSL-------ETTHPTATE 153
Query: 132 KNVVSPRFRDVTGRPPPLDLTFAPDLAVKL--------EEIPVNPCFALMLAFSE---PL 180
K + P P L L +L + +PC M + E L
Sbjct: 154 KPQEVEAKAVILAIPAPQALLLLESLTAELPANFVEQVRSVEYDPCITAMAGYPENELTL 213
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSK 205
+ P K +F + E+L+W DSSK
Sbjct: 214 KNFPEKAITFPEDEILAWVGLDSSK 238
>gi|83859572|ref|ZP_00953092.1| probable deoxyribodipyrimidine photolyase [Oceanicaulis sp.
HTCC2633]
gi|83851931|gb|EAP89785.1| probable deoxyribodipyrimidine photolyase [Oceanicaulis sp.
HTCC2633]
Length = 331
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 71/185 (38%), Gaps = 40/185 (21%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
MS RR + G + FDHGA F T T + + + G W S DR
Sbjct: 42 MSTRRAETPLG-PVRFDHGAQFITATGESFSEFLEQARTAGAADLWTGRTVSIDRGG--- 97
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
N + ++VGVPGM++I K G +++FG + VSG G
Sbjct: 98 -NAESLREKTRWVGVPGMSAIVKTALD--GFDARFG-----------RRASHVSGEAGAW 143
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTF------------APDLAVKLEEIPVNP 168
+ F D V P R V PP + F A LA KL +P
Sbjct: 144 MIHFE-----DSPVEGPFDRLVLTLPPEQLIEFLARSDGDFSEIIAEALATKL-----SP 193
Query: 169 CFALM 173
C+A+M
Sbjct: 194 CWAVM 198
>gi|431926939|ref|YP_007239973.1| NAD/FAD-dependent oxidoreductase [Pseudomonas stutzeri RCH2]
gi|431825226|gb|AGA86343.1| putative NAD/FAD-dependent oxidoreductase [Pseudomonas stutzeri
RCH2]
Length = 328
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 21/204 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S+ + D GA +FT + VR+W++ G V +W + F +
Sbjct: 41 RMASKRSDAGSLDLGAQYFTARDRRFGEAVRQWQTEGWVDQWSPGMYQFRNGQLTPSADE 100
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
Q ++VG P M+SI + L V + E + W++ G S G F
Sbjct: 101 Q----LRWVGTPTMSSITRGLLGALPVTFSCRI----TEVFRGERFWTLVDATGASHGPF 152
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ V+ + + + + + A + P +A+ L F+ PL++
Sbjct: 153 SQVIIAAPAPQAAALLATAPKLAAVAASVA-----------MEPTWAVALGFATPLNTT- 200
Query: 185 VKGFSFQDSEVLSWAHCDSSKPGR 208
++G QD + L W + SKPGR
Sbjct: 201 LEGCFVQD-DALDWIARNRSKPGR 223
>gi|398810653|ref|ZP_10569466.1| putative NAD/FAD-dependent oxidoreductase [Variovorax sp. CF313]
gi|398082385|gb|EJL73138.1| putative NAD/FAD-dependent oxidoreductase [Variovorax sp. CF313]
Length = 360
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 18/202 (8%)
Query: 16 FDHGAPFFTVTNND-VLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVG 74
FD GA +FTV + LAL + GL W NL + + +V
Sbjct: 68 FDSGAQYFTVRDPRFALALA---STPGLCKRWSANLVRVLDAHGRVAEAALPSLEPHWVA 124
Query: 75 VPGMNSICKALCHQPGVESKFGVGVGRFE---WLEDKNLWSVSGLDGQSLGQFNGVVASD 131
PGM+++ G G V + E + +G D S ++G A
Sbjct: 125 QPGMDALVAHWAKPLGDSLVAGTQVTQIEPDALAPQRWQLRTTGTD-DSRHVYSGFDAVL 183
Query: 132 KNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF---SEPLSSI--PVK 186
V R R + G D + L+ K+E + + PC+ LM+A+ ++P S P
Sbjct: 184 LAVPPSRARALLG-----DGKLSATLSRKIEPVRIAPCWTLMIAYPQANQPTMSHLGPQW 238
Query: 187 GFSFQDSEVLSWAHCDSSKPGR 208
+ ++W +SSKPGR
Sbjct: 239 NAARSTHHRVAWLARESSKPGR 260
>gi|443646857|ref|ZP_21129535.1| FAD dependent oxidoreductase [Microcystis aeruginosa DIANCHI905]
gi|159028881|emb|CAO90686.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335686|gb|ELS50150.1| FAD dependent oxidoreductase [Microcystis aeruginosa DIANCHI905]
Length = 314
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF TV AL+ +V W FD
Sbjct: 47 RRVNRANREMAVDHGLPFLTVQGEKTAALIDNLLREHIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVNRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M + + L ++
Sbjct: 141 SLIVLA---IPAPQAALLLENSC---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------TPSTAIAWLGLDSSK 204
>gi|422303561|ref|ZP_16390912.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389791449|emb|CCI12731.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 314
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF T+ AL+ + +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTIQGEKTAALIDNLLTDNIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E ++K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAKGLEIERDF--LVTRLENRQEK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M + + L ++
Sbjct: 141 SVIVLA---IPAPQAALLLENSL---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
+ ++W DSSK
Sbjct: 191 -------PATDIAWLGLDSSK 204
>gi|255080734|ref|XP_002503940.1| predicted protein [Micromonas sp. RCC299]
gi|226519207|gb|ACO65198.1| predicted protein [Micromonas sp. RCC299]
Length = 468
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 47/232 (20%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVL-ALVREWESGGLVAEWKVNL------GSFDRVS 57
RE +++G FDH + T T ++ +EW GL+AEW + GSF
Sbjct: 46 REAADNGRRFSFDHSTQYMTCTEGSRFESMAKEWAKEGLLAEWPADRVGTLKDGSFTPFD 105
Query: 58 KKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWL---------EDK 108
V +Y+G G+ + L ++ V R +W+ K
Sbjct: 106 DGVV---------RYIGAGGLRPLADFL-------AEGSTEVVRPQWVGAMTPVGGEGPK 149
Query: 109 NLWSV-SGLDGQSLGQFNGVVASDKNVVSPRFRDVT----GRPPP------LDLTFAPDL 157
W + SG G+ LG F+ V S + R + G P L F
Sbjct: 150 RRWELASGPRGKPLGTFDFVAISHNGKCALRLAETAKLQDGSPAAAKTRASLQCAFGARP 209
Query: 158 AVKLE---EIPVNPCFALMLAFSEPLS-SIPVKGFSFQDSEVLSWAHCDSSK 205
+L+ ++ ++ +ALM A +PL+ ++G SEV+SWA ++K
Sbjct: 210 TEELKKQRKLILSSVWALMFAVDKPLNVKDNMEGAHIVGSEVVSWASNITAK 261
>gi|387814207|ref|YP_005429690.1| hypothetical protein MARHY1790 [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381339220|emb|CCG95267.1| conserved hypothetical protein, putative FAD dependent
oxidoreductase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 341
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 25/196 (12%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
D GA +FT N + W W G + + ++ ++VG P
Sbjct: 61 DIGAQYFTSRNPGFTRFLDRWAGHQSYQSWNARFG-YQTERDSWHTFPEE---HRFVGTP 116
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
M +I +AL +ES GV + R + ++ W ++ + Q F+ VV +
Sbjct: 117 RMTAISRALSEHISLES--GVRIARLS--KHRSKWQLTDTESQHYDGFDQVVIT----AP 168
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQ----D 192
P R LD A LA + I PC+A+ F+ + F F +
Sbjct: 169 PAQAQELLRDSGLD-AMAEGLAGHVGNIL--PCWAVAAHFNRSVD------FPFDAARPN 219
Query: 193 SEVLSWAHCDSSKPGR 208
S+VL W +SSKPGR
Sbjct: 220 SDVLFWVANNSSKPGR 235
>gi|323455686|gb|EGB11554.1| hypothetical protein AURANDRAFT_61838 [Aureococcus anophagefferens]
Length = 387
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Query: 2 SQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFV 61
S R+T +DG + HGAP F VT + AL+ +G V K +G+ V F
Sbjct: 49 SATRKTRDDGR-VAISHGAPSFKVTTHKFRALLDGLPAGTTVPLPK-PVGAL--VGDAF- 103
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL 121
+ + + G G ++C AL G + +F V E D W++ G DG L
Sbjct: 104 ---EPDGDDRRAGAGGAAALCDALLRDSGADPRFRSMVRGIERTGD-GAWALRGTDGAEL 159
Query: 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLD-------LTFAPDLAVKLEEIPVNPCFALML 174
G+F+ + S V R+ G PPL + + P A+ML
Sbjct: 160 GRFDWLAVSGSGVAHDRWTATFGGEPPLKAAAASLGDAALDAAIAAVNGVASKPVMAVML 219
Query: 175 AF 176
AF
Sbjct: 220 AF 221
>gi|205372695|ref|ZP_03225506.1| putative deoxyribodipyrimidine photolyase [Bacillus coahuilensis
m4-4]
Length = 320
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 35/162 (21%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFTV D+ + V EW S G V EW + K++
Sbjct: 52 DHGAQFFTVRTEDLQSEVNEWLSHGWVREWYRD------------------PYPKFIAPE 93
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMNS+ K L V+ + V E K L S + + +F G +K +V+
Sbjct: 94 GMNSLIKRLSKSLPVKLRSKVT-------EVKKLDSYVEVLTEDGKRFQG----EKLIVT 142
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSE 178
P +DL KL EIP N C+ ++ +E
Sbjct: 143 APL------PQTIDLVQEIGQVDKLLEIPYNACYVGIIRCAE 178
>gi|319794203|ref|YP_004155843.1| amine oxidase [Variovorax paradoxus EPS]
gi|315596666|gb|ADU37732.1| amine oxidase [Variovorax paradoxus EPS]
Length = 360
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 88/236 (37%), Gaps = 14/236 (5%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S D FD GA +FTV + AL E + L W NL +
Sbjct: 57 RMASIDTTFGRFDSGAQYFTV-RDPRFALALE-ATPSLCRPWSANLVRVLDAHGRVAEAA 114
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFE--WLEDKNLWSVSGLDGQSLG 122
G +V PGM+++ G V + E L+ K + + S
Sbjct: 115 LPGRESHWVAQPGMDALVAYWAAPLGSNLITNTQVTQIEPDALDPKRWQLRTAGEDDSQH 174
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP--- 179
++G A V R R + G D + ++ K+E + + PC+ LM+AF +
Sbjct: 175 VYSGFDAVLLAVPPSRTRALLG-----DGKLSAAISQKIEPVRIAPCWTLMIAFPQANQA 229
Query: 180 -LSSI-PVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNIKK 233
+S + P + ++W +SSKPGR W+ + R + +
Sbjct: 230 NMSHLGPQWNAARSTHHRVAWLARESSKPGRERIERWTLQASATWSQEHLRDDAPR 285
>gi|384427195|ref|YP_005636553.1| hypothetical protein XCR_1536 [Xanthomonas campestris pv. raphani
756C]
gi|341936296|gb|AEL06435.1| conserved hypothetical protein [Xanthomonas campestris pv. raphani
756C]
Length = 326
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 24/206 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + G + DHGA +FT + D +A V W + A W L S+D + +
Sbjct: 36 RMRALAGQQWHCDHGAQYFTARDPDFMAAVGAWVANDCAAPWLARLASWDGSTLQ----P 91
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
G +++VGVP M + AL G++ + + + ++ W++ G
Sbjct: 92 SLGTLQRFVGVPDMAAPAHALA--VGLDLRTETRIDALQ--RTEHGWALRGAGLPEAVPA 147
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+V + + + T A DLA + P +A++ F+ P+ +
Sbjct: 148 ELLVLALPAPQAAALLE----------TAASDLARVAARGRMQPAWAVVARFTAPVEA-- 195
Query: 185 VKGFS--FQDSEVLSWAHCDSSKPGR 208
G+ F ++ L W +SSKPGR
Sbjct: 196 --GYDGLFVNAGALRWIARNSSKPGR 219
>gi|381208123|ref|ZP_09915194.1| fumarate reductase/succinate dehydrogenase flavoprotein
domain-containing protein, partial [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 277
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 31/172 (18%)
Query: 13 EMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKY 72
E DHGA FFTV ++ VR WE G+ W K ++ DG + ++
Sbjct: 5 EFRLDHGAQFFTVRDSRFEKYVRRWEKAGVAKIW-----------CKGFSLAGDG-HLRF 52
Query: 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDK 132
G GMNSI K L Q V + V + W LD ++ F V A
Sbjct: 53 RGTDGMNSIPKWLAGQLDVRTGHKVKSVQLA----HQSWQ---LDFEA---FPSVCADQL 102
Query: 133 NVVSPRFRDV----TGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ SP + + TG+ + A L +I +PC A+M+ +PL
Sbjct: 103 LMTSPVPQSIALLETGK-----VELASSTKNYLNKISYDPCIAMMVLPKQPL 149
>gi|440752549|ref|ZP_20931752.1| FAD dependent oxidoreductase family protein [Microcystis aeruginosa
TAIHU98]
gi|440177042|gb|ELP56315.1| FAD dependent oxidoreductase family protein [Microcystis aeruginosa
TAIHU98]
Length = 314
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + E+ DHG PF T+ AL+ +V W FD
Sbjct: 47 RRVNRANQEIAVDHGLPFLTIQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQGLEIERDF--LVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M + + L ++
Sbjct: 141 SAIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 191 -------PSTDIAWLGLDSSK 204
>gi|425460187|ref|ZP_18839669.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9808]
gi|389827182|emb|CCI21777.1| Genome sequencing data, contig C315 [Microcystis aeruginosa PCC
9808]
Length = 314
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + EM DHG PF TV AL+ +V W FD
Sbjct: 47 RRVNRANQEMAVDHGLPFLTVQGEKTAALIDNLLRENIVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L G+E V R E + K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAQ--GLEIDRDFLVTRLENRQGK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M + + L ++
Sbjct: 141 SVIVLA---IPAPQAALLLENS---HITTMPE----LRSIVYDPCLTVMAGYGDSLPAVA 190
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 191 -------PSTDIAWLGLDSSK 204
>gi|407768954|ref|ZP_11116331.1| FAD dependent oxidoreductase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407287874|gb|EKF13353.1| FAD dependent oxidoreductase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 341
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 47/198 (23%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR +E GN F+HGA + T + A +R S +W+ NL + ++
Sbjct: 42 LATRR--TEFGN---FNHGAQYVTARDPAFRAFLRHAASQNSARDWRPNLYHGQQAQRQQ 96
Query: 61 V-NIQQDGMNKK---YVGVPGMNSICKALCHQPGVESKFGVGV----GRFEWLEDKNLWS 112
DG Y G P MN + L + ++ + G E++ NL
Sbjct: 97 TPRPIADGNTAADIWYQGAPLMNKLVTPLLTSFEIRTRHHINRIEPHGPREFILHNNL-- 154
Query: 113 VSGLDGQSLGQFNGVVASDK--------NVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI 164
GQ G F+GV+A+ +SPRF DV + +
Sbjct: 155 -----GQEFGPFDGVIATAPAPQAAELLQPLSPRF-DV------------------INNV 190
Query: 165 PVNPCFALMLAFSEPLSS 182
+ PC++ M+AF+ PL +
Sbjct: 191 KIAPCWSAMIAFANPLPT 208
>gi|440796219|gb|ELR17328.1| FAD dependent oxidoreductase [Acanthamoeba castellanii str. Neff]
Length = 377
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 80/214 (37%), Gaps = 40/214 (18%)
Query: 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWK-VNLGSFDRVSKKFVNIQQDG----- 67
+ FD GA +FT + A V E + G V EW + + DR + + +G
Sbjct: 77 LSFDDGAQYFTARAPEFRAFVEECVARGCVREWAPLRVAVIDREGEVVLKPDDEGKKKEE 136
Query: 68 ----MNKKYVGVPGMNSICKALCHQPGVESKFGVGVG---RFEWLEDKNLWSVSGLDGQS 120
N +YVG P M + L + V V R E + W + G G+
Sbjct: 137 KEAENNARYVGSPTMQAFIPFLAQPVAHTIQQSVRVADIQRREGGDGGERWGLVGEKGED 196
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
LG F VV V +P+ D+ L AP+L K A SE L
Sbjct: 197 LGDFEAVVV---GVPAPQAVDL--------LRAAPNLRAK--------------AASESL 231
Query: 181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLC 214
F + LSW +SSKP R ++ C
Sbjct: 232 QFD--GAFVNDKASPLSWIARNSSKPDRVGHKEC 263
>gi|289678386|ref|ZP_06499276.1| amine oxidase, flavin-containing, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 217
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 25/196 (12%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD--RVSKKFVN 62
R +S+ + D GA +FT + V++W++ G VAEW +L +F R+S
Sbjct: 40 RMSSKRSDAGSLDMGAQYFTARDRRFATAVKQWQTQGHVAEWTPSLYNFHDGRLSPS--- 96
Query: 63 IQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLG 122
++VG GM++I +A+ + + F + + + W++ +G+S G
Sbjct: 97 ---PDEQVRWVGTLGMSAITRAM--RGDLPVSFSCRI--TDVFRGEQHWNLLDAEGESHG 149
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182
F+ V+ + +P + L AP LA + + ++P +A+ LAF PL +
Sbjct: 150 PFSHVI-----IATPAPQATA------LLAAAPKLASVVAGVKMDPTWAVALAFETPLQT 198
Query: 183 IPVKGFSFQDSEVLSW 198
P++G +DS L W
Sbjct: 199 -PMQGCFVRDSP-LDW 212
>gi|37522447|ref|NP_925824.1| hypothetical protein glr2878 [Gloeobacter violaceus PCC 7421]
gi|35213448|dbj|BAC90819.1| glr2878 [Gloeobacter violaceus PCC 7421]
Length = 342
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR + G E+ DHGA +FT + +V + G + W + + K+
Sbjct: 40 LATRRVATASG-EVRLDHGAQYFTCRSEAFRQVVEPLIADGEITLWLDGVPTL----KQG 94
Query: 61 VNIQQDGMNK--KYVGVPGMNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGL 116
+ D ++ +Y+ GM ++ K L H+ + E+K LE+ W V+
Sbjct: 95 ILDPPDAAHRSARYICPQGMTALAKVLTHELDIRLETKATALA-----LEENGRWRVTTD 149
Query: 117 DGQSLGQFNGVVASDKN--VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALML 174
G + + + + ++ F DV+ F P AV PC A+M
Sbjct: 150 RGVEIARAVLLTPPPQQSLAIAGEFGDVSA--------FDPARAVDF-----LPCLAVMA 196
Query: 175 AFSEPLSSIPVKGFSFQDSEVLSWAHCDSSK 205
+ +G ++D +++W+ DSSK
Sbjct: 197 GYGAADPGGLPRGLRWEDDPIVAWSALDSSK 227
>gi|443478733|ref|ZP_21068449.1| amine oxidase [Pseudanabaena biceps PCC 7429]
gi|443015938|gb|ELS30712.1| amine oxidase [Pseudanabaena biceps PCC 7429]
Length = 338
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +V ++ VR+ + G+V EW ++ + + + + D + +Y
Sbjct: 51 DHGAQLISVKSDSFGRFVRKLQDKGIVQEWTRDV--YQLSASGLIAPEADARHTRYCCPM 108
Query: 77 GMNSICKALCHQ-PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
GM +I K L H+ P + + V V +DK W + D Q L + +V++ +
Sbjct: 109 GMTAIAKYLAHEIPIINNARIVSVSH---KDDK--WQLVT-DRQELLETAAIVST---IP 159
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQ--DS 193
+P+F + L AP+ ++ + P +M ++ +S+P + + + +
Sbjct: 160 APQFLPIFEEV----LAAAPNFLHAVQSVTFAPSVTIMAGYNAN-NSVPSEWQAIRCIND 214
Query: 194 EVLSWAHCDSSK 205
+L W DSSK
Sbjct: 215 PILDWISYDSSK 226
>gi|294055434|ref|YP_003549092.1| fumarate reductase/succinate dehydrogenase flavoprotein
domain-containing protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614767|gb|ADE54922.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
protein [Coraliomargarita akajimensis DSM 45221]
Length = 326
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA FFTV V EW + G++ EW R SK V+ DG + +YVGV
Sbjct: 55 DHGAQFFTVREQRFRGYVDEWLNAGVIREWF-------RHSK--VDHHPDG-HPRYVGVD 104
Query: 77 GMNSICKALC 86
GM+++ K L
Sbjct: 105 GMHAVPKFLA 114
>gi|407775765|ref|ZP_11123057.1| FAD dependent oxidoreductase [Thalassospira profundimaris WP0211]
gi|407281126|gb|EKF06690.1| FAD dependent oxidoreductase [Thalassospira profundimaris WP0211]
Length = 348
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNL-----------GSFDRVSKKFVNIQ 64
F+HGA + T + A ++E W NL + +++ N+
Sbjct: 55 FNHGAQYVTARDPGFNAFLQEATEFNAAQNWSPNLHRGTSAPAQSGAALSPIARHVGNLA 114
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
++ Y G P MN + + L ++ + + VG E ++ LDG + G F
Sbjct: 115 EE---PWYQGAPQMNKLIRPLVDTFPIQKQHRI-VG-IEPNGPRSFMLHDDLDG-TYGPF 168
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+GV+ + +P+ D+ PL +AP ++E+ + PC+A+M AF PL +
Sbjct: 169 DGVIVT---APAPQTADLLR---PLAPRYAP-----IDEVVMAPCWAVMAAFESPLPT-- 215
Query: 185 VKGFS--FQDSEVLSWA 199
GF S +SWA
Sbjct: 216 --GFDAMLYPSPEISWA 230
>gi|254784877|ref|YP_003072305.1| FAD dependent oxidoreductase [Teredinibacter turnerae T7901]
gi|237687007|gb|ACR14271.1| putative FAD dependent oxidoreductase [Teredinibacter turnerae
T7901]
Length = 332
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 79/199 (39%), Gaps = 27/199 (13%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
D GA +FT + V EW G+V W S + + + ++DG +YVGV
Sbjct: 49 LDLGAQYFTARDPRFRTKVAEWLRAGVVEPWSF---SPYELCETGLRAREDGQT-RYVGV 104
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P MNS L V R E L N GQ++ V +D
Sbjct: 105 PAMNSAAHELAENLDVRLN-----SRVERLLVAN------------GQWHVVTGNDSTGD 147
Query: 136 SPRFRDVTGRPPPLD---LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQD 192
RF V P L ++A ++ C+AL LA + S +KGF F D
Sbjct: 148 EARFDRVIVCLPANQSKALLHEYEIASRIPTEVHQACWALALATRGHVES-DIKGF-FGD 205
Query: 193 SEVLSWAHCDSSKPGRSAN 211
+ +SW SS+P R ++
Sbjct: 206 -DFVSWVSRLSSRPMRDSS 223
>gi|170746499|ref|YP_001752759.1| FAD dependent oxidoreductase [Methylobacterium radiotolerans JCM
2831]
gi|170653021|gb|ACB22076.1| FAD dependent oxidoreductase [Methylobacterium radiotolerans JCM
2831]
Length = 313
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 73/210 (34%), Gaps = 45/210 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + +M FDHGA F A + W G+V W DR
Sbjct: 42 RMATRRAGDMQFDHGAQFMRARGPAFAAQLECWAQRGIVKPW----AGADR--------- 88
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YVGVPGM +AL G+ V R + W V G G F
Sbjct: 89 -------YVGVPGMTEPVRALLR--GLPVSSATTVVRLRRAGPR--WHVEDASGTVHGPF 137
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEI---PVNPCFALMLAFSEPLS 181
+G+ + P P +T V L I PC++LM+A +
Sbjct: 138 DGIAITF--------------PAPQVVTLLDASGVALPGIGRASYAPCWSLMVATD---A 180
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSAN 211
S P + + AH D+SKPGR A
Sbjct: 181 SPPDVLIEPRTDPIGLIAH-DASKPGRPAG 209
>gi|239816100|ref|YP_002945010.1| FAD dependent oxidoreductase [Variovorax paradoxus S110]
gi|239802677|gb|ACS19744.1| FAD dependent oxidoreductase [Variovorax paradoxus S110]
Length = 360
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 88/236 (37%), Gaps = 14/236 (5%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S D FD GA +FTV + AL E + L W NL +
Sbjct: 57 RMASVDTAFGRFDSGAQYFTV-RDPRFALALE-ATPSLCRPWSANLVRVLDAHGRVAEAA 114
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEW--LEDKNLWSVSGLDGQSLG 122
G +V PGM+++ G V + E L+ K + + S
Sbjct: 115 LPGRESHWVAQPGMDALVAHWAAPLGDSLVADTQVTQIEADALDPKRWQLRTAGEDDSQH 174
Query: 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEP--- 179
++G A V R R + G D + ++ K+E + + PC+ LM+AF +
Sbjct: 175 VYSGFDAVLLAVPPSRTRALLG-----DGKLSAAISQKIEPVRIAPCWTLMIAFPQANQA 229
Query: 180 -LSSI-PVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTNWTSKAFRSNIKK 233
+S + P + ++W +SSKPGR W+ + R + +
Sbjct: 230 NMSHLGPQWNAARSTHHRVAWLARESSKPGRERVERWTLQASATWSQEHLRDDAAR 285
>gi|254491731|ref|ZP_05104910.1| hypothetical protein MDMS009_2066 [Methylophaga thiooxidans DMS010]
gi|224463209|gb|EEF79479.1| hypothetical protein MDMS009_2066 [Methylophaga thiooxydans DMS010]
Length = 326
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 33/201 (16%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRV---SKKFVNIQQDGMNKKY 72
FD+GA FFT + + V E ++ G+V W + FD S++ D Y
Sbjct: 51 FDYGAQFFTAKTSAFQSFVDEMQAKGVVGIWNGHFIEFDHTDICSER----DWDESYPHY 106
Query: 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDK 132
VG P M++I L + + + E + + W + D LG ++ VV
Sbjct: 107 VGTPNMSAIGNWLAEPLTIHYETTIT----ELKKTASGWQLLQ-DDTELGAYDWVV---- 157
Query: 133 NVVSPRFRDVTGRPPPLDLTFAPD--LAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF-- 188
+T PP + A + L I + CFAL +A P + + GF
Sbjct: 158 ---------LTMPPPQVSQLLAAEHTFQTTLSAITMQACFALRVA---PKNEQDL-GFNA 204
Query: 189 SFQDSEVLSWAHCDSSKPGRS 209
+ + +SW +SSKP RS
Sbjct: 205 ALIRNHDISWISKNSSKPERS 225
>gi|408672459|ref|YP_006872207.1| amine oxidase [Emticicia oligotrophica DSM 17448]
gi|387854083|gb|AFK02180.1| amine oxidase [Emticicia oligotrophica DSM 17448]
Length = 318
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 26/183 (14%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + E FDHGA +F+ D + + EW++ GS
Sbjct: 40 RLATRRAAEAKFDHGAQYFSTKTPDFQSFAENLIQKQIAKEWQLQEGS------------ 87
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + + +G+ GM+SI K L G+ K V E E N +SV G S +
Sbjct: 88 ANFRHARLIGIQGMSSIAKFLAE--GLSIKLSEKVIHIE--ETNNGFSVKTEAGNSF-EA 142
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
++ + +P+ ++ L F P++A +L++I +PC A+M E S+IP
Sbjct: 143 KAIICT---APAPQAIELMTNS---HLNF-PEIA-QLQQIKYHPCIAVMANLKEA-SNIP 193
Query: 185 VKG 187
G
Sbjct: 194 QPG 196
>gi|418515630|ref|ZP_13081809.1| hypothetical protein MOU_02287 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707539|gb|EKQ65990.1| hypothetical protein MOU_02287 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 344
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + Q + +YVGVP
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWD---GTRLRRSQSALT-RYVGVP 120
Query: 77 GMNSICKALCHQ 88
M + + L Q
Sbjct: 121 EMPAPARTLAAQ 132
>gi|397686337|ref|YP_006523656.1| amine oxidase, flavin-containing [Pseudomonas stutzeri DSM 10701]
gi|395807893|gb|AFN77298.1| amine oxidase, flavin-containing [Pseudomonas stutzeri DSM 10701]
Length = 328
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
D G +FT + +V +W++ G +W +L F + + + ++VG
Sbjct: 52 LDLGTQYFTARDRRFTEIVHQWQADGWADQWSPSL--FQSRDGQLSPSTDEQL--RWVGT 107
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M++I + L V + E + W++ G S G F+ V+ +
Sbjct: 108 PTMSAITQGLLDDLPVTFSCRIT----EVFRGEEFWTLVDATGASHGPFSQVIIA----- 158
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
V L AP LA + + P +A+ L F+ PL + V+G +D +
Sbjct: 159 ------VPAPQAAALLAAAPKLAAVAASVAMEPTWAVALGFATPLET-SVEGCFVRD-DA 210
Query: 196 LSWAHCDSSKPGR 208
L W D SKPGR
Sbjct: 211 LDWIARDHSKPGR 223
>gi|302837830|ref|XP_002950474.1| hypothetical protein VOLCADRAFT_117582 [Volvox carteri f.
nagariensis]
gi|300264479|gb|EFJ48675.1| hypothetical protein VOLCADRAFT_117582 [Volvox carteri f.
nagariensis]
Length = 2282
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPG 207
+T AP +A +L + +N +ALM+AF PL +P +G Q S +LSWA +++K G
Sbjct: 112 VTGAPRVAQQLMRLRLNAVWALMVAFDGPL-PVPFEGAFIQGSPILSWAGNNTAKMG 167
>gi|108803992|ref|YP_643929.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941]
gi|108765235|gb|ABG04117.1| FAD dependent oxidoreductase [Rubrobacter xylanophilus DSM 9941]
Length = 338
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 15 LFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVG 74
+ D GA FFTV + +VR W G+ AEW + S ++ + DG + +Y
Sbjct: 50 ILDTGAQFFTVRSERFAGIVRGWLESGVAAEWSRG---WADASGRY---EPDG-HPRYRA 102
Query: 75 VPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNV 134
GM + L G+ + G GV + W + G GV+ + +
Sbjct: 103 AGGMARLAAHLAR--GLPVRCGCGV--LSAAPREGGWELRLAGG-------GVLRARSLL 151
Query: 135 VSPRFRDVTGRPPPLDLTFAPDLAVK-LEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS 193
++P + P P L P+ A + L I +PC AL++ + +P G S
Sbjct: 152 LTPPAPEARRIPEPGSL---PEGAERELAGIAYDPCLALLVLLDDGPPVVPEPGGMQVRS 208
Query: 194 EVLSW 198
E + W
Sbjct: 209 EAVDW 213
>gi|297624962|ref|YP_003706396.1| amine oxidase [Truepera radiovictrix DSM 17093]
gi|297166142|gb|ADI15853.1| amine oxidase [Truepera radiovictrix DSM 17093]
Length = 333
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 80/206 (38%), Gaps = 20/206 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R +E DHGA +FT + V W + G + W + K I
Sbjct: 47 RRVRMGASETPVDHGAQYFTARDARFREQVEAWLAEGDLRVWSAGFHTL----KGRSLIP 102
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + +Y G++++ K L + + + G V + D W ++ DG
Sbjct: 103 PEAGHPRYAFASGLSTLGKQLAAE--LSVRRGARVRQLT-PADGGGWRLTFEDGSHHLSP 159
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
++ N+ +P+ R+V G + PD L + PC A++ + P P
Sbjct: 160 RVLL----NLPAPQAREVCG------PSLPPDAERALAAVRFAPCLAVIAGY--PDHPPP 207
Query: 185 V-KGFSFQDSEVLSWAHCDSSKPGRS 209
+G +D L+W DSSK R+
Sbjct: 208 AWRGVHVEDGGPLAWIAHDSSKRPRA 233
>gi|428208486|ref|YP_007092839.1| amine oxidase [Chroococcidiopsis thermalis PCC 7203]
gi|428010407|gb|AFY88970.1| amine oxidase [Chroococcidiopsis thermalis PCC 7203]
Length = 360
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLE----DKNLWSVSGLDGQSLGQFNG 126
+YV GMN+I K L G+ V R + +E + W +S S N
Sbjct: 101 RYVAPAGMNAIAKFLGQ--------GLAVWRSQRVEAIAFHNSYWQLSLESASSEATANQ 152
Query: 127 ---VVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
V+A + P + + P +L+ + +L + NPC ++M +S L S
Sbjct: 153 PSEVIAKAVVLAIPAPQALAILEPLTELS---TVCQQLRSVEFNPCLSVMAGYSSQLESQ 209
Query: 184 P-VKGFSFQDSEVLSWAHCDSSK 205
P + SF D+ VL+W DSSK
Sbjct: 210 PDWQAVSFVDNPVLAWVGWDSSK 232
>gi|118398195|ref|XP_001031427.1| hypothetical protein TTHERM_00825590 [Tetrahymena thermophila]
gi|89285755|gb|EAR83764.1| hypothetical protein TTHERM_00825590 [Tetrahymena thermophila
SB210]
Length = 352
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/209 (17%), Positives = 82/209 (39%), Gaps = 6/209 (2%)
Query: 5 RETSEDGNEMLFDHGAPFFTV----TNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
R TS + +DHGA +FT + V+ ++++ + + L FD+ SK +
Sbjct: 31 RATSNSRHGYTYDHGANYFTFEGLSQSQRVIDIIKKQLPAEDLIQITKELYLFDKDSKIY 90
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
+ +K G+ + + + + KF V ++ +D W+++ D +
Sbjct: 91 -QTKDTQQTEKLTYRKGLIQLAELIQKDQDLNVKFEYFVDNLKYCQDTKKWTITYSDKAN 149
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
V+++D +++P + + ++ E+ L++AF + +
Sbjct: 150 NSNKQDVISTDYILLTPPAPQIVDLFKKSEYHKKDEIMQIFEKCKYKKQLCLVIAFEKKI 209
Query: 181 SSIPVKGFSFQDSE-VLSWAHCDSSKPGR 208
IP +D + + W + K G
Sbjct: 210 QDIPYFALLNEDRQHSIVWITVEDQKEGH 238
>gi|409396215|ref|ZP_11247222.1| amine oxidase, flavin-containing [Pseudomonas sp. Chol1]
gi|409119164|gb|EKM95550.1| amine oxidase, flavin-containing [Pseudomonas sp. Chol1]
Length = 315
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
D GAP F + L + +W S G A W DG +VG
Sbjct: 51 LDLGAPGFLAQDPAFLTTLADWTSAGSCAAWAAI----------------DGPQPYWVGT 94
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M++I +AL + + F + E + W + G S G F+ V+ + +
Sbjct: 95 PRMSAISRALLGN--LPAIFSCRIS--EVFRGERHWQLLDTAGASHGPFSHVIVA---LP 147
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQ-DSE 194
+P+ + T AP LA + + + P +A+ L F+E ++P S + D E
Sbjct: 148 APQAGALL--------TAAPALAARAASVVMEPVWAVALGFAE---ALPGAQHSLRLDDE 196
Query: 195 VLSWAHCDSSKPGRSANRL 213
+L A DS+KPGR NRL
Sbjct: 197 ILQQATHDSAKPGRD-NRL 214
>gi|166365146|ref|YP_001657419.1| hypothetical protein MAE_24050 [Microcystis aeruginosa NIES-843]
gi|425465389|ref|ZP_18844698.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|166087519|dbj|BAG02227.1| hypothetical protein MAE_24050 [Microcystis aeruginosa NIES-843]
gi|389832390|emb|CCI24050.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 314
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 43/201 (21%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + + DHG PF T+ AL+ LV W FD
Sbjct: 47 RRVNRVNQVIAVDHGLPFLTIQGEKTAALIDNLLRENLVTSW------FD---------- 90
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
YV G+NS+ K L +E F V R E ++K W ++ +GQ G+F
Sbjct: 91 -----SSYVAPSGINSVAKFLAKGLEIERDF--LVTRLENRQEK--WVLNN-NGQIRGEF 140
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ +V + + +P+ + +T P+ L I +PC +M + + L ++
Sbjct: 141 SAIVLA---IPAPQAALLLENSL---ITTMPE----LRSIVYDPCLTVMAGYGDSLPAV- 189
Query: 185 VKGFSFQDSEVLSWAHCDSSK 205
S ++W DSSK
Sbjct: 190 ------APSTDIAWLGLDSSK 204
>gi|145346404|ref|XP_001417678.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577906|gb|ABO95971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 365
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 115 GLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALML 174
G + +S+ F+ VV +DKN + D +LA + E+P P LM+
Sbjct: 136 GGETRSMSGFDVVVLADKNAANV-----------ADALGVEELARAMREVPSVPSLVLMV 184
Query: 175 AFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNC 219
+ +I G ++ + LSW +SSKP R +D NC
Sbjct: 185 TLNRA-PAIEFVGAEIENDDALSWISNESSKPSRR-----RDANC 223
>gi|428780406|ref|YP_007172192.1| NAD/FAD-dependent oxidoreductase [Dactylococcopsis salina PCC 8305]
gi|428694685|gb|AFZ50835.1| putative NAD/FAD-dependent oxidoreductase [Dactylococcopsis salina
PCC 8305]
Length = 340
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 35/211 (16%)
Query: 1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
++ RR + E +FD+GA + T + + W LV EW +K
Sbjct: 46 LATRRINIPNSGEGIFDYGAQYITAQGETFQSWLENWRQLKLVEEWNCE-------AKTE 98
Query: 61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
++Q KY GV G+ + K++ V++ G V + +D W V
Sbjct: 99 AEVKQ----PKYRGVKGIRDVAKSIASDLDVQT--GTKVVSLQRHQDS--WRV------- 143
Query: 121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAV------KLEEIPVNPCFALML 174
+ SD +++ P LDL + + + +L + C A++L
Sbjct: 144 FDEEENQYESDSVILTAPL------PQSLDLLKSSQIPLSDAAWEQLSGVSYRMCLAVLL 197
Query: 175 AFSEPLSSIPVKGFSFQDSEVLSWAHCDSSK 205
S+P+ +P G E L W C+ K
Sbjct: 198 MVSDPI-LMPYAGGYQVKGEKLDWIACNHQK 227
>gi|78046940|ref|YP_363115.1| hypothetical protein XCV1384 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035370|emb|CAJ23015.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 331
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + A+V W G+ A W+ + S+D + + +YVGV
Sbjct: 65 DHGAQYFTARDPAFAAVVDAWIDAGIAAPWQARIASWDGTQLR----RSQSALMRYVGVS 120
Query: 77 GMNSICKALCHQ 88
M + + L Q
Sbjct: 121 EMTAPARTLAAQ 132
>gi|220909428|ref|YP_002484739.1| FAD dependent oxidoreductase [Cyanothece sp. PCC 7425]
gi|219866039|gb|ACL46378.1| FAD dependent oxidoreductase [Cyanothece sp. PCC 7425]
Length = 361
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 20/221 (9%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLAL---VREWESGGLVAEWKVNLGSFDRVSKKFV 61
R + E+ DHG P+ ++ ++ AL V ++ W +G D
Sbjct: 39 RLATRRWGELRLDHGLPYLSLKSDAAKALQQLVTPLLEQKILTPWPETIGQLDPQGA--- 95
Query: 62 NIQQDGMNKKYVGVPGMNSICKALCHQPGVE-SKFGVGVGRFEW----LEDKNLWSVSGL 116
+ + Y GM+ I K L ++ ++ VG+ EW L+ S++
Sbjct: 96 -LSLLPAHHCYAAPAGMSVIAKYLAQDLDLQLNQRLVGLWLGEWGKTGLQRHWQLSLTTP 154
Query: 117 DGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAF 176
G+ L Q V + P + + P + AP+ LE I PCF+ + +
Sbjct: 155 TGEYLSQQAMAVV----LAIPAPQALAICTPLVAKGLAPEFIRALEAIDYAPCFSTLALY 210
Query: 177 ----SEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRL 213
+ ++P + ++ + +LSW DSSK +S L
Sbjct: 211 PAVRQADVQTLPWQALNWSNDPILSWIGLDSSKRPQSEQPL 251
>gi|422662144|ref|ZP_16724176.1| amine oxidase, flavin-containing, partial [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330983053|gb|EGH81156.1| amine oxidase, flavin-containing [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 166
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSA 210
L AP LA + + ++P +A+ LAF PL + P++G QDS L W + SKPGR A
Sbjct: 5 LAAAPKLASVVAGVKMDPTWAVALAFETPLQT-PMQGCFVQDSP-LDWLARNRSKPGRDA 62
Query: 211 N 211
Sbjct: 63 T 63
>gi|427409810|ref|ZP_18900012.1| hypothetical protein HMPREF9718_02486 [Sphingobium yanoikuyae ATCC
51230]
gi|425711943|gb|EKU74958.1| hypothetical protein HMPREF9718_02486 [Sphingobium yanoikuyae ATCC
51230]
Length = 319
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 36/193 (18%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
+D GAP+FT + V W G VA W DG VGV
Sbjct: 49 WDLGAPWFTARDPRFRTEVGRWRKAGWVARWS------------------DGPGNAMVGV 90
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M ++ + + V +F V + + + W + +G +G F+ VV +
Sbjct: 91 PAMATLVREQSRRFDVHFEFRVQ----SLVREDSSWMIQA-EGDCVGPFDTVV-----IA 140
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV 195
P + PL + A + + +PC+A+M+ F L +P + + ++
Sbjct: 141 VP-----AEQAAPLLSLHDLEAAREAASVRSSPCWAVMVEFPHQL-DVPTPFAT--NVDI 192
Query: 196 LSWAHCDSSKPGR 208
S C+ SKP R
Sbjct: 193 FSMVACNRSKPER 205
>gi|405967022|gb|EKC32236.1| Small conductance calcium-activated potassium channel protein
[Crassostrea gigas]
Length = 861
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 94/235 (40%), Gaps = 20/235 (8%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R+T +G FDH +FTV++ +V + V W +G S KF +
Sbjct: 42 RKTMINGQLHTFDHSCQYFTVSDRRFANIVSFLHNKNAVKIWTGKIGHLK--SGKFH--E 97
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++G GM ++ L V+ V + W E W V G +
Sbjct: 98 DSNITQAFIGTDGMQTVADCLASNANVQRP--VWISEVFWEEGSRKWKV-----DRFGFY 150
Query: 125 NGVVASDKNVVSPRFRDVTGRPPP---LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ ++ + + + G P L + F L + + + + + L++AF PL
Sbjct: 151 DYLIIAHNGKCADKLMSSAGAPEVHSLLRVRFNDVLNPRDQRMHLCSLWVLLIAFETPL- 209
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTN-WT---SKAFRSNIK 232
+ +G + D + +SW +++K + + + T WT +KAF N K
Sbjct: 210 KLCFEG-AHIDHDDISWISNNTAKYRNAREPVAGKKDSTECWTIISTKAFGKNFK 263
>gi|448733634|ref|ZP_21715876.1| flavin-containing amine-oxidoreductase [Halococcus salifodinae DSM
8989]
gi|445802154|gb|EMA52461.1| flavin-containing amine-oxidoreductase [Halococcus salifodinae DSM
8989]
Length = 353
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 8/203 (3%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + N +DHGA +F + V LV E +AE + + +FD + V+
Sbjct: 47 RAATRRKNGCRYDHGANYFKDQDARVTELVTETLDTDGLAEAEGPIWTFD--ADGTVSEG 104
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+D + K+ G+ + K L + + VG E ++ W+++ DG LG++
Sbjct: 105 RDTDDHKWTYRAGITQLAKRLFDRTEATIEKSTRVGAVERVD--GGWTIADTDGTDLGRY 162
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP 184
+ ++ + +P+ D+ D DL + ++ P +L + L
Sbjct: 163 DALLLTPP---APQTADLLA-ATEWDDDLRGDLETAVRDVSFRPTITAVLHYPFELDRPY 218
Query: 185 VKGFSFQDSEVLSWAHCDSSKPG 207
+ + W + KPG
Sbjct: 219 YALVNTDKDHAIGWCSREECKPG 241
>gi|304321242|ref|YP_003854885.1| amine oxidase, flavin-containing [Parvularcula bermudensis
HTCC2503]
gi|303300144|gb|ADM09743.1| amine oxidase, flavin-containing [Parvularcula bermudensis
HTCC2503]
Length = 322
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 30/165 (18%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGV 75
FDHG PF T ++ D A + W + G W + G D V+ VG
Sbjct: 58 FDHGTPFLTASHPDFQAQLERWIASGQAQNWPCSGG--DHVT---------------VGS 100
Query: 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVV 135
P M + + + GV FG + ED+ W V G+ LG A+D V+
Sbjct: 101 PHMRTPIEHAAQRLGV--LFGSRIAPLTRGEDRA-WPVLTETGEPLG------AADILVL 151
Query: 136 SPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
+ V L T LA + +PC+ M+ F+ PL
Sbjct: 152 AIPAEQVAE----LLATVGGPLAQAASAVRSSPCWTTMVHFAAPL 192
>gi|428317222|ref|YP_007115104.1| amine oxidase [Oscillatoria nigro-viridis PCC 7112]
gi|428240902|gb|AFZ06688.1| amine oxidase [Oscillatoria nigro-viridis PCC 7112]
Length = 355
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 38/206 (18%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA + + V L++ ++ W + F + + + YV
Sbjct: 51 DHGARYLEPQGDAVQGLIKALVDRHILKLWTDTVWEFRQGELSAI------ASSCYVAPA 104
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GMN+I K L GVE FG V D +W +S + +D N+
Sbjct: 105 GMNAIGKYLAE--GVEIWFGRRVQAIS-TTDNQMWHLS------------LEVTDDNLQI 149
Query: 137 PR----FRDVTGRPPPLDLTF-------APDLAVKLEEIPVNPCFALMLAF----SEPLS 181
P+ V P P L F D KL + +PC +M + + LS
Sbjct: 150 PQELIAKAVVVAIPAPQALMFLNSEIGFKSDFLDKLRSVEYDPCITVMAGYPATKQQDLS 209
Query: 182 SI--PVKGFSFQDSEVLSWAHCDSSK 205
++ K SF D+ L+W DSSK
Sbjct: 210 NLNPQWKSVSFPDNSDLAWVGLDSSK 235
>gi|264678126|ref|YP_003278033.1| hypothetical protein CtCNB1_1991 [Comamonas testosteroni CNB-2]
gi|262208639|gb|ACY32737.1| conserved hypothetical protein [Comamonas testosteroni CNB-2]
Length = 246
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 19/150 (12%)
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
QD +++VG P M S + SK RF+W +V L +S F
Sbjct: 2 QDSFLERFVGTPRMTSPAAHMVRDMHAISK----SVRFQWQA-----TVQPLQPRS--AF 50
Query: 125 NGVVASDKNVVSPRFRD--VTGRPPP----LDLTFAPDLAVKLEEIPVNPCFALMLAFSE 178
++ S ++ P + V P P L AP + + PC+ALM+ +
Sbjct: 51 GWILQSQEHGTEPHRYEAVVLAAPAPQAEALLAGVAPQASALARNARMLPCWALMVRCHQ 110
Query: 179 PLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
PL S+PV G F + L W D SKP R
Sbjct: 111 PL-SLPVDG-CFVEHSPLRWIARDGSKPSR 138
>gi|254410096|ref|ZP_05023876.1| FAD dependent oxidoreductase domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183132|gb|EDX78116.1| FAD dependent oxidoreductase domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 358
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 73/200 (36%), Gaps = 21/200 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHG PF L+ G++ W N Q + + +YV
Sbjct: 51 DHGVPFLEAKGKLSQQLIETLCDRGILHRWMDN------------QDQAECPSPRYVAPT 98
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM +I K L ++ +F V ++ W ++ + A + +
Sbjct: 99 GMTAIAKYLAQD--LDIRFSCRVCAITPTPEQT-WQITYHTPEETDNNLTAAAVVMAIPA 155
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS--E 194
P+ V PL+ F + L+ + NPC ++M +S P P+ S S
Sbjct: 156 PQALTVLE---PLEKEFPSNFLESLQTVDFNPCLSVMAGYSSP-QQPPLTSGSINCSPDA 211
Query: 195 VLSWAHCDSSKPGRSANRLC 214
L+W DSSK S + +C
Sbjct: 212 NLAWIGVDSSKRSDSTSLIC 231
>gi|84515692|ref|ZP_01003053.1| probable deoxyribodipyrimidine photolyase [Loktanella vestfoldensis
SKA53]
gi|84510134|gb|EAQ06590.1| probable deoxyribodipyrimidine photolyase [Loktanella vestfoldensis
SKA53]
Length = 312
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 57/211 (27%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + + FDHGA + +V AL+ E G V W
Sbjct: 45 RVATRRAEGLHFDHGAQYVSVRGAGFAALLGELTLSGHVGTW------------------ 86
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGL----DGQS 120
QDG +VG PGM+++ K G+G G L+ + V+GL +G
Sbjct: 87 QDG----HVGTPGMSALAK------------GIGAG----LDVRQEALVTGLSHDGEGWQ 126
Query: 121 LGQFNGVVASDK---NVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS 177
+ + V+A+ + V +P+ + G P L +L ++ P LM A
Sbjct: 127 VRLGDEVLAASQVICTVPTPQVAGIIGADHP--------LVARLTDVAYAPNLTLMAAID 178
Query: 178 EPLSSIPVKGFSFQDSEVLSWAHCDSSKPGR 208
P + + D++ L+W DS+KP R
Sbjct: 179 GPAPFVVARD---PDAD-LAWIAQDSTKPDR 205
>gi|338213023|ref|YP_004657078.1| amine oxidase [Runella slithyformis DSM 19594]
gi|336306844|gb|AEI49946.1| amine oxidase [Runella slithyformis DSM 19594]
Length = 320
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 22/182 (12%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVP 76
DHGA +FT + + E G+V EW ++ +S + +++G
Sbjct: 51 DHGAQYFTARTAEFRQFISELTDAGIVREWALHESKMSDISFH---------HPRFIGTE 101
Query: 77 GMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136
GM+ I K + V + G D+N +V GQ+ ++ + +
Sbjct: 102 GMSGIAKYMAQPLNVHT----GERAVRISGDENNCTVLTESGQTYRADTLIL----TLPA 153
Query: 137 PRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVL 196
P+ + + +P + I PC A+M++ SSIP G D +
Sbjct: 154 PQASTLLAE----NQLLSPSEQAVFDAIEYAPCLAVMVSI-HGRSSIPAPGIIKFDQGPI 208
Query: 197 SW 198
+W
Sbjct: 209 AW 210
>gi|443290244|ref|ZP_21029338.1| Amine oxidase [Micromonospora lupini str. Lupac 08]
gi|385886571|emb|CCH17412.1| Amine oxidase [Micromonospora lupini str. Lupac 08]
Length = 332
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD 54
D GA +FT ++ D A+V EW + GLV EW S+D
Sbjct: 68 DTGAAYFTASDPDFAAVVDEWRAAGLVREWTDTFWSYD 105
>gi|307154671|ref|YP_003890055.1| amine oxidase [Cyanothece sp. PCC 7822]
gi|306984899|gb|ADN16780.1| amine oxidase [Cyanothece sp. PCC 7822]
Length = 350
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 71/196 (36%), Gaps = 20/196 (10%)
Query: 17 DHGAPFFTVTNNDVLALVREWESGGLVAEWK---VNLGSFDRVSKKFVNIQQDGMNKKYV 73
DHG PF TVT L+ E ++ W +L S D + + N +Y+
Sbjct: 58 DHGLPFLTVTGQYSQRLIEELSELNIIQAWTGKVYHLSSDDVFTHEAAN--------RYI 109
Query: 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKN 133
G+N+I K L + V L W + G D + Q + AS
Sbjct: 110 ASSGINAIAKHLAKDLEIWRNCRV---TLLGLAQGPSWCLIGDDSANFAQ--PIFASALV 164
Query: 134 VVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFS----EPLSSIPVKGFS 189
+ P + + + F +LE + P +++ ++ L + G
Sbjct: 165 LAIPAPQALMLLEASKSVNFPEPFLHQLEAVEFKPTLSVIAGYAPQSQTELLQLSWDGVK 224
Query: 190 FQDSEVLSWAHCDSSK 205
F D L+W DSSK
Sbjct: 225 FIDDPYLAWVGIDSSK 240
>gi|297183024|gb|ADI19170.1| predicted NAD/FAD-dependent oxidoreductase [uncultured delta
proteobacterium HF0130_05G09]
Length = 319
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 25/166 (15%)
Query: 10 DGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMN 69
D E +D+GA FFTV + + V EWE V W F N DG N
Sbjct: 45 DNKEFRYDYGAQFFTVRSEEFGDQVSEWEMKKHVKVW----------CNGFEN--NDGHN 92
Query: 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVA 129
+Y+ GM + K + G++ + V + E+L+D W + G S F
Sbjct: 93 -RYMSTNGMRDLLKNIS--SGLKIQQNQKVAKIEYLDD--YWRL----GTSRANFE---- 139
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLA 175
S+ V++ + + + D ++++I C AL++
Sbjct: 140 SELLVITTPLPQCVELLKTIPIFYHHDSLDEIKKIEYKKCIALIMT 185
>gi|393765148|ref|ZP_10353738.1| FAD dependent oxidoreductase [Methylobacterium sp. GXF4]
gi|392729440|gb|EIZ86715.1| FAD dependent oxidoreductase [Methylobacterium sp. GXF4]
Length = 300
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 75/205 (36%), Gaps = 41/205 (20%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R + + + FDHGA F + A + +WE G+V W R ++
Sbjct: 29 RMATRRADGLQFDHGAQFMRAHGDVFAARLADWERRGIVGPWA-------RAGRR----- 76
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
VG+P M + + L V S G + R + D W ++ G G F
Sbjct: 77 --------VGIPDMTAPVRDLLSDLSVAS--GTAITRI--IRDGACWRLADGAGGEHGPF 124
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVK-LEEIPVNPCFALMLAFSEPLSSI 183
V + P P L A A+ +E PC++LM+A + +
Sbjct: 125 AAVA-----ITFP-------APQIAALLAASGFALAGVERATYAPCWSLMVAVERAPADV 172
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
++ + + DSSKPGR
Sbjct: 173 LIE----PNDGPIGLIASDSSKPGR 193
>gi|409399923|ref|ZP_11250125.1| hypothetical protein MXAZACID_03961 [Acidocella sp. MX-AZ02]
gi|409130982|gb|EKN00711.1| hypothetical protein MXAZACID_03961 [Acidocella sp. MX-AZ02]
Length = 330
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 75/202 (37%), Gaps = 32/202 (15%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFD---RVSKKFVNIQQDGMNKKY 72
FD GA +FT + +A V S G+V+ W+ + +S++ N Y
Sbjct: 51 FDFGAQYFTARDPRFVAEVAALRSAGIVSPWRCRFSKIENGCEISRQLWNDD----TAHY 106
Query: 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDK 132
VG M+++ G++ K + + E W + G+ G F VV +
Sbjct: 107 VGTGRMSALSAYWAR--GLDVKLQTRITQLR--EAGTGWRLQSDSGEVFGPFAFVVIALP 162
Query: 133 NVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQD 192
+ + L L V + ++ CFALML P +F
Sbjct: 163 ALQA-----------AALLPDQSALRVNAQAARMSGCFALMLGLEAPAE------LAFDA 205
Query: 193 SEV----LSWAHCDSSKPGRSA 210
+E+ LSW S+PG A
Sbjct: 206 AEIISGPLSWLAVCESRPGHEA 227
>gi|323451534|gb|EGB07411.1| hypothetical protein AURANDRAFT_64951 [Aureococcus anophagefferens]
Length = 1585
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQSLGQFNGVVASDKNV 134
MN+ +ALCH P + F G E+ D N+ +S G S G +A+ K
Sbjct: 737 MNATVQALCHAPPIRDYFASG----EYAYDVNVDSRYSPRGALAASFGDLVAALATRKGP 792
Query: 135 VSP-RFRDVTGRPPPLDLTFA 154
V+P +FR V G+ D TFA
Sbjct: 793 VAPHKFRRVVGK---FDATFA 810
>gi|375111216|ref|ZP_09757427.1| FAD dependent oxidoreductase [Alishewanella jeotgali KCTC 22429]
gi|374568758|gb|EHR39930.1| FAD dependent oxidoreductase [Alishewanella jeotgali KCTC 22429]
Length = 259
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 25/171 (14%)
Query: 42 LVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGR 101
+VA W + F V+ K + ++VGVP M+S + L ++ ++ + R
Sbjct: 12 VVAPWLAAMSQF--VAGKL--LPSPDAQLRFVGVPAMHSPLRQLAQ--DLDIRYQCQLQR 65
Query: 102 FEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAP-DLAVK 160
W +D + W + GQ G F+ +V + PP + P + +
Sbjct: 66 I-WQQD-HYWWLQDRTGQDYGPFSQIVLT--------------VPPQQAVAMLPAEYSTL 109
Query: 161 LEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEV-LSWAHCDSSKPGRSA 210
L + + PC+A+ L + P S V G +D ++ LSW +SKPGR++
Sbjct: 110 LPQQILTPCWAVDLQLTRP-SGSNVGGIFVKDPQLPLSWLCRQNSKPGRAS 159
>gi|301607035|ref|XP_002933109.1| PREDICTED: hypothetical protein LOC100486992 [Xenopus (Silurana)
tropicalis]
Length = 393
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 84/223 (37%), Gaps = 25/223 (11%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R S G E +FDH FFTV++ +V S V W G ++ K ++
Sbjct: 49 RIISIAGKEYVFDHTVQFFTVSDPRFAKIVSFLHSKKAVKVWT---GKIVQLKKGAEPVE 105
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
+ + ++G GM ++ + C V K V W W V G F
Sbjct: 106 VKNI-QPFIGTSGMQTVPR--CLSSLVHVKGNTWVSNVHWDSVVKKWKV-----DDHGWF 157
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPLDLT---FAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
+ +V + + R G P DL F P L K + + + L++AF
Sbjct: 158 DYLVVAHNGKCADRLMADCGVPKIHDLLKVKFGPVLLPKTSVMQLCSLWVLLVAF----- 212
Query: 182 SIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCTN-WT 223
P K F D + H D S G + ++ + +CT WT
Sbjct: 213 --PCKLGLFFDGAFVE--HSDISWLGNNTSKYSAE-DCTECWT 250
>gi|149926365|ref|ZP_01914626.1| probable deoxyribodipyrimidine photolyase [Limnobacter sp. MED105]
gi|149824728|gb|EDM83942.1| probable deoxyribodipyrimidine photolyase [Limnobacter sp. MED105]
Length = 331
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 16 FDHGAPFFTVTNNDVLALVREWESGGLVAEWK---VNLGSFDRVSKKFVNIQQDGMNKKY 72
FDHG +F ++ + L+ G VA W VNLG ++ ++
Sbjct: 45 FDHGTQYFQASSPAFVELIDLAHKAGAVAPWAGSVVNLG-------YGLSSPHASTTTRW 97
Query: 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ--FNGVV-A 129
VG PGM S+ + + G++ + V + +V DG + F+ VV A
Sbjct: 98 VGTPGMASLGRFMAQ--GLDVRLQCRVAGVVHTDGLFQLTVHLADGTVRVESGFHAVVSA 155
Query: 130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFS 189
V P F +V PL LA +E N +++ML E L + G
Sbjct: 156 VPAEQVVPLFEEVH---KPL-----AQLAAAVES---NATWSVMLTPRE-LVKVDFDGAF 203
Query: 190 FQDSEVLSWAHCDSSKPGRS 209
DS L W DSSKPGR+
Sbjct: 204 VVDSP-LGWICRDSSKPGRA 222
>gi|237654596|ref|YP_002890910.1| FAD dependent oxidoreductase [Thauera sp. MZ1T]
gi|237625843|gb|ACR02533.1| FAD dependent oxidoreductase [Thauera sp. MZ1T]
Length = 330
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ G DHGA +FT + D + + W++ G+ A W L FD ++ V+
Sbjct: 42 RTSTRRGEGWACDHGAQYFTARHPDFIEELAAWQAAGVAAPWPARLTVFDSDGRRGVH-- 99
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQ- 123
G ++VG P M + + L G++ + + V + + W ++ + L +
Sbjct: 100 --GEEARFVGTPRMTAPARHLAR--GLDLRVQLTVSALQ--RYPHGWEIATAERGMLPEA 153
Query: 124 FNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI 183
F+GV+ + P + V P A A +++ C+ALM F PL+
Sbjct: 154 FDGVL-----LAVPSPQAVPLLLPLSPALAATAQAARMQA-----CWALMARFDAPLAVD 203
Query: 184 PVKGFSFQDSEVLSWAHCDSSKPGR 208
+F + L W D SKPGR
Sbjct: 204 --FDAAFVNRGPLRWVARDRSKPGR 226
>gi|308495011|ref|XP_003109694.1| hypothetical protein CRE_07423 [Caenorhabditis remanei]
gi|308245884|gb|EFO89836.1| hypothetical protein CRE_07423 [Caenorhabditis remanei]
Length = 388
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 153 FAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANR 212
F P+LA K++ + + C + ++P G SE W HCD RS R
Sbjct: 220 FTPELAYKVDYVELGSCVTNAASENQP-------GVGSVTSEWSEWTHCDEQTSSRSRQR 272
Query: 213 LCKDCN 218
+C CN
Sbjct: 273 VCNGCN 278
>gi|383790127|ref|YP_005474701.1| putative NAD/FAD-dependent oxidoreductase [Spirochaeta africana DSM
8902]
gi|383106661|gb|AFG36994.1| putative NAD/FAD-dependent oxidoreductase [Spirochaeta africana DSM
8902]
Length = 441
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
Query: 12 NEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKK 71
E +FDHGA F TV + + W G+VA W + N +
Sbjct: 81 GEAVFDHGAQFMTVRDPGFARAMAGWTKSGVVAPWFGD------------------KNTR 122
Query: 72 YVGVPGMNSICKALCHQPGVE 92
Y G GM ++ K L Q V+
Sbjct: 123 YRGQTGMTALAKQLSQQVDVQ 143
>gi|359409164|ref|ZP_09201632.1| putative NAD/FAD-dependent oxidoreductase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675917|gb|EHI48270.1| putative NAD/FAD-dependent oxidoreductase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 329
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 43/207 (20%)
Query: 5 RETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQ 64
R ++ LF+HGA F T + A+ + GG +A W +
Sbjct: 40 RMSTRRAEGFLFNHGAQFVTARSERFKAVCQAAVDGGKLASWPL---------------- 83
Query: 65 QDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQF 124
DG + G P M + + + +E V + + + GL SL
Sbjct: 84 -DGREQALSGTPAMRGLAEFMGQGLRIEQDVEV---------EHIICAADGLVHLSL--- 130
Query: 125 NGVVASDKNVVSPRFRDVTGRPPPL---DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLS 181
S+K ++ R VT P T AP LA E+ PC+ +M FS PL+
Sbjct: 131 -----SNKTQITCRHLLVTCPAPQTARLLATAAPRLAAAAAEVRYAPCWTVMAGFSAPLA 185
Query: 182 --SIPVKGFSFQDSEVLSWAHCDSSKP 206
+ PV+ + ++ WA + S+P
Sbjct: 186 LPAAPVQ----THTGIVGWATYEGSRP 208
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,087,370,392
Number of Sequences: 23463169
Number of extensions: 172859339
Number of successful extensions: 319700
Number of sequences better than 100.0: 394
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 304
Number of HSP's that attempted gapping in prelim test: 319140
Number of HSP's gapped (non-prelim): 419
length of query: 235
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 97
effective length of database: 9,121,278,045
effective search space: 884763970365
effective search space used: 884763970365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)