Query 026682
Match_columns 235
No_of_seqs 193 out of 834
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 19:31:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1.6E-27 5.5E-32 209.1 16.1 208 1-229 43-257 (342)
2 1yvv_A Amine oxidase, flavin-c 99.9 1.8E-20 6.1E-25 162.8 20.9 194 14-228 49-243 (336)
3 3nks_A Protoporphyrinogen oxid 99.3 2.3E-12 7.9E-17 117.0 9.9 143 71-227 226-378 (477)
4 2ivd_A PPO, PPOX, protoporphyr 99.1 9.7E-11 3.3E-15 106.3 8.0 138 69-219 228-373 (478)
5 2yg5_A Putrescine oxidase; oxi 99.1 3.2E-10 1.1E-14 102.2 9.4 134 71-219 207-342 (453)
6 3i6d_A Protoporphyrinogen oxid 99.1 4.1E-10 1.4E-14 101.5 9.4 110 70-194 226-338 (470)
7 1s3e_A Amine oxidase [flavin-c 99.1 8.9E-10 3.1E-14 101.4 11.4 123 70-203 206-331 (520)
8 3lov_A Protoporphyrinogen oxid 98.9 2.1E-09 7.1E-14 97.5 9.1 108 69-194 226-336 (475)
9 4dsg_A UDP-galactopyranose mut 98.9 3E-09 1E-13 97.5 9.3 133 74-218 211-350 (484)
10 2jae_A L-amino acid oxidase; o 98.9 1.6E-09 5.4E-14 98.8 6.4 126 69-206 229-359 (489)
11 2vvm_A Monoamine oxidase N; FA 98.8 7.2E-09 2.4E-13 94.6 7.7 124 71-207 247-374 (495)
12 3ka7_A Oxidoreductase; structu 98.7 5.9E-08 2E-12 86.4 11.3 130 72-212 189-324 (425)
13 2iid_A L-amino-acid oxidase; f 98.7 2.2E-08 7.5E-13 91.4 8.6 123 70-203 232-359 (498)
14 3nrn_A Uncharacterized protein 98.7 4.3E-08 1.5E-12 87.6 9.7 127 71-212 181-311 (421)
15 2z3y_A Lysine-specific histone 98.5 2.1E-07 7.2E-12 88.5 9.2 101 69-182 391-501 (662)
16 1sez_A Protoporphyrinogen oxid 98.5 2.7E-07 9.3E-12 84.1 9.1 112 70-191 234-358 (504)
17 1b37_A Protein (polyamine oxid 98.5 8.4E-07 2.9E-11 80.5 12.3 99 75-182 202-311 (472)
18 2xag_A Lysine-specific histone 98.5 3.5E-07 1.2E-11 89.2 9.2 105 69-182 562-672 (852)
19 1rsg_A FMS1 protein; FAD bindi 98.3 3.4E-06 1.2E-10 77.4 11.5 100 77-182 200-307 (516)
20 4gut_A Lysine-specific histone 98.3 2.3E-06 7.8E-11 82.8 9.2 101 69-182 524-626 (776)
21 3k7m_X 6-hydroxy-L-nicotine ox 98.2 6.8E-06 2.3E-10 73.1 10.4 95 74-180 202-296 (431)
22 2b9w_A Putative aminooxidase; 98.1 5E-06 1.7E-10 73.9 7.6 85 71-170 198-282 (424)
23 4dgk_A Phytoene dehydrogenase; 98.1 7.4E-06 2.5E-10 74.4 7.9 100 71-180 213-317 (501)
24 4gde_A UDP-galactopyranose mut 98.0 1.6E-05 5.6E-10 72.1 8.4 90 73-179 216-308 (513)
25 3ayj_A Pro-enzyme of L-phenyla 97.6 5.4E-05 1.8E-09 72.5 5.2 108 70-182 338-494 (721)
26 3kkj_A Amine oxidase, flavin-c 96.9 0.1 3.5E-06 41.0 20.4 148 14-180 49-196 (336)
27 1v0j_A UDP-galactopyranose mut 96.6 0.00089 3.1E-08 59.4 2.5 75 73-179 199-273 (399)
28 2bi7_A UDP-galactopyranose mut 96.4 0.0013 4.5E-08 58.1 2.9 67 73-177 193-260 (384)
29 1i8t_A UDP-galactopyranose mut 96.3 0.0016 5.4E-08 57.2 2.4 71 73-179 189-259 (367)
30 1d5t_A Guanine nucleotide diss 94.8 0.021 7.1E-07 51.0 4.0 57 71-130 226-285 (433)
31 3nyc_A D-arginine dehydrogenas 93.7 0.14 4.9E-06 43.8 7.0 47 80-130 155-204 (381)
32 2e1m_A L-glutamate oxidase; L- 93.7 0.055 1.9E-06 47.8 4.3 45 68-114 309-353 (376)
33 3p1w_A Rabgdi protein; GDI RAB 93.4 0.13 4.5E-06 46.7 6.5 60 70-130 247-309 (475)
34 2bcg_G Secretory pathway GDP d 93.4 0.053 1.8E-06 48.6 3.8 54 73-130 236-295 (453)
35 3pvc_A TRNA 5-methylaminomethy 93.4 0.15 5E-06 48.3 7.0 49 79-130 412-464 (689)
36 3ps9_A TRNA 5-methylaminomethy 93.0 0.14 4.8E-06 48.2 6.2 49 79-130 417-468 (676)
37 4a9w_A Monooxygenase; baeyer-v 91.5 0.26 8.8E-06 41.5 5.5 50 78-131 78-128 (357)
38 2uzz_A N-methyl-L-tryptophan o 91.4 0.3 1E-05 41.8 5.9 46 80-130 154-199 (372)
39 3dme_A Conserved exported prot 91.3 0.34 1.2E-05 41.0 6.1 49 80-130 151-204 (369)
40 3dje_A Fructosyl amine: oxygen 91.2 0.23 7.8E-06 43.7 5.1 39 89-130 174-216 (438)
41 1vg0_A RAB proteins geranylger 91.1 0.4 1.4E-05 45.3 6.8 58 70-130 369-432 (650)
42 2e1m_B L-glutamate oxidase; L- 91.1 0.13 4.3E-06 38.5 2.7 52 123-182 7-58 (130)
43 3gwf_A Cyclohexanone monooxyge 91.1 0.28 9.7E-06 45.1 5.7 60 71-131 82-143 (540)
44 1ryi_A Glycine oxidase; flavop 90.6 0.72 2.5E-05 39.4 7.5 47 80-130 165-214 (382)
45 3hdq_A UDP-galactopyranose mut 90.4 0.31 1.1E-05 43.2 5.1 91 73-200 217-307 (397)
46 4hb9_A Similarities with proba 90.3 0.58 2E-05 40.2 6.7 51 79-131 112-162 (412)
47 2vou_A 2,6-dihydroxypyridine h 90.3 0.91 3.1E-05 39.4 8.0 49 79-130 99-148 (397)
48 3d1c_A Flavin-containing putat 90.1 0.42 1.4E-05 40.7 5.6 45 83-131 95-139 (369)
49 2xdo_A TETX2 protein; tetracyc 90.0 0.55 1.9E-05 40.8 6.3 50 79-131 128-178 (398)
50 2oln_A NIKD protein; flavoprot 89.6 0.38 1.3E-05 41.6 5.0 47 79-130 157-203 (397)
51 2gf3_A MSOX, monomeric sarcosi 89.5 0.45 1.5E-05 40.8 5.3 47 80-130 151-200 (389)
52 2gv8_A Monooxygenase; FMO, FAD 89.2 0.41 1.4E-05 42.5 5.0 47 83-131 122-173 (447)
53 4ap3_A Steroid monooxygenase; 88.8 0.51 1.8E-05 43.4 5.5 54 77-131 100-155 (549)
54 3v76_A Flavoprotein; structura 88.8 0.51 1.7E-05 41.9 5.3 58 76-137 129-189 (417)
55 1y56_B Sarcosine oxidase; dehy 88.7 0.59 2E-05 40.0 5.5 38 89-130 162-200 (382)
56 2x3n_A Probable FAD-dependent 88.6 0.62 2.1E-05 40.3 5.7 39 90-131 122-162 (399)
57 3uox_A Otemo; baeyer-villiger 88.6 0.25 8.6E-06 45.5 3.2 56 75-131 86-143 (545)
58 2ywl_A Thioredoxin reductase r 87.7 0.61 2.1E-05 35.6 4.5 38 88-130 68-105 (180)
59 2i0z_A NAD(FAD)-utilizing dehy 86.7 0.8 2.8E-05 40.7 5.3 54 79-135 134-191 (447)
60 3lzw_A Ferredoxin--NADP reduct 86.3 1.1 3.7E-05 37.2 5.7 41 86-130 77-118 (332)
61 1w4x_A Phenylacetone monooxyge 85.6 1.2 4.2E-05 40.6 6.1 54 78-132 96-151 (542)
62 2gqf_A Hypothetical protein HI 85.0 1.4 4.9E-05 38.6 5.9 57 77-137 107-170 (401)
63 1xdi_A RV3303C-LPDA; reductase 84.7 1.4 4.6E-05 39.8 5.8 44 84-130 231-274 (499)
64 3rp8_A Flavoprotein monooxygen 84.5 1 3.6E-05 39.0 4.9 48 81-131 129-177 (407)
65 2v3a_A Rubredoxin reductase; a 84.3 1.4 4.7E-05 38.1 5.5 43 86-131 197-239 (384)
66 2zbw_A Thioredoxin reductase; 83.8 1.4 4.7E-05 36.9 5.2 40 89-131 78-117 (335)
67 2gag_B Heterotetrameric sarcos 83.6 1.8 6.2E-05 37.1 6.0 45 81-130 180-225 (405)
68 3s5w_A L-ornithine 5-monooxyge 83.5 1.1 3.7E-05 39.6 4.6 54 78-131 129-188 (463)
69 3o0h_A Glutathione reductase; 82.4 1.5 5.2E-05 39.2 5.1 40 89-131 245-284 (484)
70 3iwa_A FAD-dependent pyridine 81.9 1.8 6.1E-05 38.6 5.4 45 83-130 209-253 (472)
71 3nlc_A Uncharacterized protein 81.6 2.2 7.4E-05 39.4 5.9 50 79-131 220-273 (549)
72 3lxd_A FAD-dependent pyridine 81.0 2.2 7.7E-05 37.2 5.6 50 79-131 197-247 (415)
73 1fl2_A Alkyl hydroperoxide red 80.7 2.4 8.1E-05 35.0 5.4 47 84-131 64-111 (310)
74 3ef6_A Toluene 1,2-dioxygenase 80.3 1.8 6E-05 37.9 4.7 46 82-130 191-236 (410)
75 3ab1_A Ferredoxin--NADP reduct 80.2 3.3 0.00011 35.1 6.3 41 88-131 86-127 (360)
76 3f8d_A Thioredoxin reductase ( 80.1 2.7 9.1E-05 34.6 5.5 40 87-130 81-120 (323)
77 2qa2_A CABE, polyketide oxygen 79.9 2.4 8.1E-05 38.3 5.5 42 88-131 119-162 (499)
78 2yqu_A 2-oxoglutarate dehydrog 79.4 1.7 5.9E-05 38.5 4.4 40 89-131 221-260 (455)
79 3oc4_A Oxidoreductase, pyridin 79.2 3.5 0.00012 36.4 6.3 48 80-131 193-240 (452)
80 2xve_A Flavin-containing monoo 78.4 1.9 6.4E-05 38.5 4.3 43 89-131 114-162 (464)
81 1m6i_A Programmed cell death p 78.1 3.1 0.00011 37.4 5.7 47 82-131 232-278 (493)
82 1mo9_A ORF3; nucleotide bindin 77.8 2.7 9.1E-05 38.1 5.2 48 88-137 267-318 (523)
83 2r9z_A Glutathione amide reduc 77.5 2.7 9.4E-05 37.4 5.1 41 88-131 219-260 (463)
84 2qa1_A PGAE, polyketide oxygen 76.7 2.3 8E-05 38.4 4.5 42 88-131 118-161 (500)
85 1k0i_A P-hydroxybenzoate hydro 76.1 3.9 0.00013 35.0 5.6 49 80-131 108-159 (394)
86 3fg2_P Putative rubredoxin red 76.1 3.3 0.00011 36.0 5.1 44 84-130 192-236 (404)
87 3c4n_A Uncharacterized protein 75.7 1.6 5.5E-05 38.0 3.0 38 89-130 185-231 (405)
88 2wpf_A Trypanothione reductase 75.6 4.1 0.00014 36.6 5.8 42 87-131 246-288 (495)
89 2q0l_A TRXR, thioredoxin reduc 75.6 3.8 0.00013 33.7 5.2 42 86-131 69-110 (311)
90 1ges_A Glutathione reductase; 75.6 3.4 0.00012 36.6 5.2 41 88-131 220-261 (450)
91 3s5w_A L-ornithine 5-monooxyge 75.4 3.8 0.00013 36.0 5.4 40 89-130 329-372 (463)
92 1fec_A Trypanothione reductase 75.2 3.6 0.00012 37.0 5.2 41 88-131 243-284 (490)
93 3fbs_A Oxidoreductase; structu 74.5 3.9 0.00013 33.2 4.9 38 90-131 71-108 (297)
94 4dna_A Probable glutathione re 74.2 4.4 0.00015 35.9 5.5 40 87-130 222-263 (463)
95 3klj_A NAD(FAD)-dependent dehy 73.4 3.6 0.00012 35.8 4.7 37 89-130 75-111 (385)
96 2eq6_A Pyruvate dehydrogenase 71.9 4.8 0.00016 35.7 5.2 43 87-131 221-267 (464)
97 2hqm_A GR, grase, glutathione 71.6 4.3 0.00015 36.2 4.8 40 89-131 239-281 (479)
98 3fmw_A Oxygenase; mithramycin, 71.4 2.5 8.5E-05 39.0 3.3 41 89-131 161-203 (570)
99 3alj_A 2-methyl-3-hydroxypyrid 71.1 6.8 0.00023 33.4 5.9 45 80-131 112-156 (379)
100 2qcu_A Aerobic glycerol-3-phos 70.9 6 0.00021 35.5 5.7 40 89-130 162-205 (501)
101 3ihg_A RDME; flavoenzyme, anth 70.8 3.9 0.00013 37.0 4.4 48 81-131 126-179 (535)
102 4b63_A L-ornithine N5 monooxyg 70.7 3.9 0.00013 36.9 4.4 53 78-130 147-209 (501)
103 3itj_A Thioredoxin reductase 1 70.3 6.5 0.00022 32.4 5.4 40 87-130 95-137 (338)
104 1zmd_A Dihydrolipoyl dehydroge 70.3 7.3 0.00025 34.5 6.0 43 86-131 230-278 (474)
105 3nix_A Flavoprotein/dehydrogen 69.9 5.7 0.0002 34.2 5.2 40 89-130 119-161 (421)
106 2qae_A Lipoamide, dihydrolipoy 69.7 6 0.0002 35.0 5.3 43 87-131 227-272 (468)
107 1onf_A GR, grase, glutathione 69.6 6.8 0.00023 35.1 5.8 43 87-131 228-271 (500)
108 1pj5_A N,N-dimethylglycine oxi 69.5 4.7 0.00016 38.7 4.9 38 89-130 164-202 (830)
109 1ojt_A Surface protein; redox- 66.4 4.8 0.00016 35.9 4.0 43 86-131 236-282 (482)
110 3e1t_A Halogenase; flavoprotei 66.3 7.9 0.00027 34.8 5.5 41 89-131 124-168 (512)
111 1zk7_A HGII, reductase, mercur 65.8 5.7 0.00019 35.2 4.3 39 88-130 228-266 (467)
112 1hyu_A AHPF, alkyl hydroperoxi 65.7 8 0.00027 35.0 5.4 44 87-131 278-322 (521)
113 2cul_A Glucose-inhibited divis 65.7 8.8 0.0003 30.4 5.1 37 90-130 83-120 (232)
114 3cgv_A Geranylgeranyl reductas 65.6 4.6 0.00016 34.4 3.6 39 89-130 115-157 (397)
115 3axb_A Putative oxidoreductase 65.4 7.1 0.00024 34.1 4.9 40 89-130 194-249 (448)
116 3lad_A Dihydrolipoamide dehydr 65.1 7 0.00024 34.6 4.8 42 87-130 232-275 (476)
117 1vdc_A NTR, NADPH dependent th 64.9 6 0.0002 32.8 4.1 39 88-131 82-120 (333)
118 1y0p_A Fumarate reductase flav 64.2 13 0.00046 33.8 6.7 50 81-133 261-315 (571)
119 1qo8_A Flavocytochrome C3 fuma 63.8 11 0.00037 34.4 5.9 52 80-134 255-311 (566)
120 1trb_A Thioredoxin reductase; 62.5 8.9 0.0003 31.5 4.7 40 86-130 72-111 (320)
121 2weu_A Tryptophan 5-halogenase 62.5 14 0.00049 32.8 6.4 39 89-131 186-226 (511)
122 2cdu_A NADPH oxidase; flavoenz 62.4 10 0.00036 33.2 5.4 42 86-131 201-243 (452)
123 2bry_A NEDD9 interacting prote 61.8 11 0.00037 33.9 5.4 54 81-135 172-230 (497)
124 3atr_A Conserved archaeal prot 61.7 12 0.0004 32.9 5.6 41 89-131 113-158 (453)
125 3d1c_A Flavin-containing putat 61.2 8.1 0.00028 32.4 4.3 40 89-130 227-267 (369)
126 3itj_A Thioredoxin reductase 1 61.1 12 0.00041 30.8 5.3 51 78-130 211-266 (338)
127 1dxl_A Dihydrolipoamide dehydr 61.0 11 0.00037 33.2 5.3 42 88-131 230-275 (470)
128 3f8d_A Thioredoxin reductase ( 60.8 13 0.00044 30.2 5.4 50 79-130 193-246 (323)
129 3cgb_A Pyridine nucleotide-dis 60.1 14 0.00046 32.9 5.8 48 82-131 99-148 (480)
130 1d4d_A Flavocytochrome C fumar 60.1 15 0.00052 33.5 6.2 52 81-135 261-317 (572)
131 2e4g_A Tryptophan halogenase; 59.9 13 0.00046 33.6 5.8 37 90-130 209-247 (550)
132 2a8x_A Dihydrolipoyl dehydroge 59.5 11 0.00037 33.3 5.0 42 88-131 224-267 (464)
133 3ntd_A FAD-dependent pyridine 58.5 11 0.00038 34.1 4.9 55 81-136 197-268 (565)
134 4at0_A 3-ketosteroid-delta4-5a 58.3 14 0.00048 33.1 5.6 54 80-135 203-264 (510)
135 1ebd_A E3BD, dihydrolipoamide 57.8 8.1 0.00028 34.0 3.8 41 88-131 223-266 (455)
136 2q7v_A Thioredoxin reductase; 55.5 14 0.00047 30.5 4.7 40 88-131 77-119 (325)
137 3r9u_A Thioredoxin reductase; 55.5 16 0.00055 29.6 5.1 50 79-130 186-239 (315)
138 1q1r_A Putidaredoxin reductase 55.1 14 0.00049 32.3 5.0 44 87-131 202-246 (431)
139 2q7v_A Thioredoxin reductase; 55.1 28 0.00096 28.5 6.6 50 79-130 191-244 (325)
140 2aqj_A Tryptophan halogenase, 55.0 22 0.00077 31.9 6.4 39 89-131 178-218 (538)
141 2r0c_A REBC; flavin adenine di 54.9 17 0.00057 33.0 5.5 37 93-131 152-192 (549)
142 3dk9_A Grase, GR, glutathione 54.7 23 0.00077 31.3 6.3 42 87-130 239-288 (478)
143 1y56_A Hypothetical protein PH 53.4 18 0.00062 32.3 5.4 52 76-131 258-309 (493)
144 3ic9_A Dihydrolipoamide dehydr 53.3 22 0.00074 31.7 6.0 39 91-131 229-270 (492)
145 3urh_A Dihydrolipoyl dehydroge 53.3 17 0.00058 32.3 5.2 43 87-131 250-296 (491)
146 3kd9_A Coenzyme A disulfide re 52.7 9.1 0.00031 33.6 3.3 42 85-130 68-109 (449)
147 2gqw_A Ferredoxin reductase; f 52.5 18 0.00062 31.3 5.2 43 81-130 192-234 (408)
148 2a87_A TRXR, TR, thioredoxin r 52.5 19 0.00066 29.8 5.2 39 88-131 83-122 (335)
149 3dgh_A TRXR-1, thioredoxin red 52.0 19 0.00063 32.0 5.2 41 88-130 239-284 (483)
150 3vrd_B FCCB subunit, flavocyto 51.7 5.2 0.00018 34.4 1.5 39 89-130 215-253 (401)
151 3c96_A Flavin-containing monoo 51.4 12 0.00041 32.3 3.8 48 81-131 113-165 (410)
152 3ics_A Coenzyme A-disulfide re 51.2 19 0.00066 32.7 5.3 47 82-130 99-147 (588)
153 3h8l_A NADH oxidase; membrane 51.2 10 0.00035 32.7 3.3 39 85-130 227-265 (409)
154 3i3l_A Alkylhalidase CMLS; fla 50.3 18 0.00062 33.3 5.0 41 89-130 141-183 (591)
155 2gqw_A Ferredoxin reductase; f 50.3 15 0.0005 31.9 4.2 39 87-130 70-108 (408)
156 1trb_A Thioredoxin reductase; 50.2 36 0.0012 27.7 6.4 40 89-130 197-242 (320)
157 2pyx_A Tryptophan halogenase; 49.5 30 0.001 31.0 6.3 39 89-131 189-229 (526)
158 1rp0_A ARA6, thiazole biosynth 48.9 21 0.00073 29.1 4.8 49 80-130 124-186 (284)
159 3ntd_A FAD-dependent pyridine 48.8 18 0.0006 32.7 4.6 46 83-130 65-112 (565)
160 3cgb_A Pyridine nucleotide-dis 48.8 22 0.00075 31.5 5.2 41 87-131 238-278 (480)
161 2rgh_A Alpha-glycerophosphate 48.7 23 0.00078 32.4 5.4 40 89-130 201-245 (571)
162 1nhp_A NADH peroxidase; oxidor 48.6 20 0.0007 31.3 4.9 47 81-131 196-242 (447)
163 4b1b_A TRXR, thioredoxin reduc 48.6 20 0.00067 32.8 4.9 39 89-130 276-314 (542)
164 3ics_A Coenzyme A-disulfide re 48.5 18 0.0006 33.0 4.6 40 86-130 238-277 (588)
165 3iwa_A FAD-dependent pyridine 48.0 21 0.00072 31.4 4.9 47 82-130 72-120 (472)
166 1v59_A Dihydrolipoamide dehydr 47.7 20 0.00068 31.6 4.7 44 87-131 235-283 (478)
167 3l8k_A Dihydrolipoyl dehydroge 47.2 14 0.00048 32.6 3.6 50 79-130 214-267 (466)
168 3ef6_A Toluene 1,2-dioxygenase 46.8 15 0.0005 31.9 3.6 37 89-130 70-106 (410)
169 3r9u_A Thioredoxin reductase; 46.3 33 0.0011 27.6 5.6 42 84-130 70-113 (315)
170 1fl2_A Alkyl hydroperoxide red 45.9 56 0.0019 26.3 7.0 49 80-130 184-237 (310)
171 3hyw_A Sulfide-quinone reducta 45.1 31 0.0011 30.0 5.5 48 79-130 203-251 (430)
172 4g6h_A Rotenone-insensitive NA 44.9 17 0.0006 32.6 3.9 49 78-130 274-327 (502)
173 2bc0_A NADH oxidase; flavoprot 44.7 14 0.00048 32.9 3.2 41 88-131 104-145 (490)
174 2q0l_A TRXR, thioredoxin reduc 44.6 41 0.0014 27.2 5.9 50 79-130 182-236 (311)
175 3da1_A Glycerol-3-phosphate de 44.5 18 0.00063 32.9 4.1 50 79-130 170-227 (561)
176 2bc0_A NADH oxidase; flavoprot 44.4 33 0.0011 30.4 5.7 45 82-131 242-287 (490)
177 1q1r_A Putidaredoxin reductase 43.8 21 0.00071 31.2 4.2 38 89-131 73-110 (431)
178 3cty_A Thioredoxin reductase; 43.7 25 0.00086 28.8 4.5 40 87-131 83-122 (319)
179 2zbw_A Thioredoxin reductase; 42.4 35 0.0012 28.0 5.2 41 88-130 203-247 (335)
180 3f7w_A Putative fructosamine-3 42.3 24 0.00081 28.7 4.1 38 77-120 1-41 (288)
181 1xhc_A NADH oxidase /nitrite r 42.1 12 0.00042 31.9 2.4 36 89-130 73-108 (367)
182 3oc4_A Oxidoreductase, pyridin 41.8 20 0.00068 31.4 3.7 41 89-131 71-111 (452)
183 3lxd_A FAD-dependent pyridine 40.6 18 0.00061 31.3 3.2 37 89-130 78-114 (415)
184 3lzw_A Ferredoxin--NADP reduct 40.6 69 0.0023 25.9 6.7 50 78-130 192-245 (332)
185 3h28_A Sulfide-quinone reducta 40.1 41 0.0014 29.1 5.5 47 79-130 203-251 (430)
186 1vdc_A NTR, NADPH dependent th 39.7 73 0.0025 25.9 6.8 50 79-130 198-254 (333)
187 3dgz_A Thioredoxin reductase 2 39.2 37 0.0013 30.1 5.1 43 87-130 236-282 (488)
188 1lvl_A Dihydrolipoamide dehydr 39.1 31 0.0011 30.3 4.6 39 89-131 225-264 (458)
189 2a87_A TRXR, TR, thioredoxin r 38.3 43 0.0015 27.6 5.2 49 80-130 195-247 (335)
190 2zxi_A TRNA uridine 5-carboxym 38.2 40 0.0014 31.6 5.2 48 80-131 128-176 (637)
191 2e5v_A L-aspartate oxidase; ar 37.0 20 0.00069 31.8 3.0 47 79-131 123-172 (472)
192 1m6i_A Programmed cell death p 36.4 19 0.00065 32.1 2.7 37 89-130 103-139 (493)
193 3hyw_A Sulfide-quinone reducta 35.6 31 0.001 30.1 3.9 36 89-130 69-104 (430)
194 1nhp_A NADH peroxidase; oxidor 35.5 45 0.0015 29.0 5.0 40 89-130 69-110 (447)
195 3cty_A Thioredoxin reductase; 34.9 1E+02 0.0036 24.8 7.0 48 80-130 195-247 (319)
196 3fbs_A Oxidoreductase; structu 34.4 39 0.0013 26.9 4.2 38 86-130 184-221 (297)
197 4fk1_A Putative thioredoxin re 33.5 72 0.0025 25.8 5.7 36 93-130 77-112 (304)
198 4eqs_A Coenzyme A disulfide re 33.5 50 0.0017 28.8 4.9 46 78-130 190-235 (437)
199 3k30_A Histamine dehydrogenase 33.2 28 0.00097 32.5 3.5 44 81-130 573-619 (690)
200 3ab1_A Ferredoxin--NADP reduct 33.1 86 0.0029 25.9 6.3 40 89-130 215-258 (360)
201 3ces_A MNMG, tRNA uridine 5-ca 31.0 52 0.0018 30.9 4.8 47 81-131 130-177 (651)
202 2dkh_A 3-hydroxybenzoate hydro 30.6 71 0.0024 29.5 5.7 48 81-131 147-207 (639)
203 3sx6_A Sulfide-quinone reducta 30.5 54 0.0018 28.4 4.7 49 78-130 210-264 (437)
204 2gmh_A Electron transfer flavo 30.4 92 0.0031 28.4 6.4 50 80-131 145-213 (584)
205 3sx6_A Sulfide-quinone reducta 29.6 70 0.0024 27.7 5.3 39 86-130 69-107 (437)
206 3cp8_A TRNA uridine 5-carboxym 29.3 50 0.0017 30.9 4.4 48 80-131 122-170 (641)
207 3pl8_A Pyranose 2-oxidase; sub 28.9 29 0.00099 32.2 2.7 55 90-146 274-335 (623)
208 2wdq_A Succinate dehydrogenase 28.8 93 0.0032 28.4 6.1 48 81-131 149-202 (588)
209 1n4w_A CHOD, cholesterol oxida 28.5 52 0.0018 29.3 4.3 51 90-142 236-295 (504)
210 3kd9_A Coenzyme A disulfide re 28.5 65 0.0022 28.0 4.8 43 82-130 197-239 (449)
211 1coy_A Cholesterol oxidase; ox 28.5 48 0.0017 29.6 4.1 51 90-142 241-300 (507)
212 4eqs_A Coenzyme A disulfide re 27.6 60 0.0021 28.3 4.4 45 84-130 65-111 (437)
213 3p12_A D-ribose pyranase; carb 27.6 60 0.0021 24.3 3.8 47 122-168 21-68 (144)
214 2cdu_A NADPH oxidase; flavoenz 27.6 55 0.0019 28.5 4.2 40 89-130 71-112 (452)
215 1ps9_A 2,4-dienoyl-COA reducta 26.5 69 0.0024 29.7 4.9 47 79-130 576-623 (671)
216 2h88_A Succinate dehydrogenase 26.4 96 0.0033 28.7 5.7 51 80-132 156-214 (621)
217 2ivd_A PPO, PPOX, protoporphyr 26.3 41 0.0014 29.3 3.1 26 14-39 63-88 (478)
218 1y56_A Hypothetical protein PH 25.1 63 0.0022 28.6 4.2 50 79-130 161-214 (493)
219 2bs2_A Quinol-fumarate reducta 25.0 92 0.0031 29.1 5.4 52 80-133 159-218 (660)
220 1kdg_A CDH, cellobiose dehydro 24.7 45 0.0015 30.0 3.1 62 81-144 201-270 (546)
221 1kf6_A Fumarate reductase flav 24.6 86 0.003 28.8 5.1 42 89-132 147-194 (602)
222 3l8k_A Dihydrolipoyl dehydroge 23.1 83 0.0028 27.5 4.5 45 81-130 94-139 (466)
223 1ebd_A E3BD, dihydrolipoamide 23.1 88 0.003 27.1 4.7 42 85-131 100-141 (455)
224 3h8l_A NADH oxidase; membrane 22.7 1E+02 0.0035 26.2 4.9 40 86-130 66-108 (409)
225 3fg2_P Putative rubredoxin red 22.5 75 0.0026 27.1 4.0 36 89-130 70-105 (404)
226 1xhc_A NADH oxidase /nitrite r 22.3 51 0.0017 28.0 2.8 39 84-130 191-229 (367)
227 2v3a_A Rubredoxin reductase; a 21.9 49 0.0017 28.0 2.7 42 83-130 67-108 (384)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=209.14 Aligned_cols=208 Identities=17% Similarity=0.226 Sum_probs=165.6
Q ss_pred CcceecccCCCCceecccCCCceecCCh---HHHHHHHHHHhCCccccccccceeEeccCcceeecccCCCCceEEeCCC
Q 026682 1 MSQRRETSEDGNEMLFDHGAPFFTVTNN---DVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPG 77 (235)
Q Consensus 1 maTRr~~~~~~~~~~fDhGAqyft~~~~---~f~~~v~~~~~~g~v~~W~~~~~~~~~~~g~~~~~~~~~~~~~yvg~~G 77 (235)
|+|++. +.+....+|||++||+++++ .|.++++.|...|.+.+|........ ......+|+..+|
T Consensus 43 ~~~~~~--~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~g 110 (342)
T 3qj4_A 43 MTTACS--PHNPQCTADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMV----------MKEGDCNFVAPQG 110 (342)
T ss_dssp GCEEEC--SSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHHTTSCEECCSCEETCC----------C--CCEEEECTTC
T ss_pred eeeeec--CCCCCceEecCCceEEcCchHHHHHHHHHHHHHhCCCeecCchhhccee----------ccCCccceecCCC
Confidence 355665 33344679999999999877 88899999999999999986432111 1234678999999
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCCCcchHH
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDL 157 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~~~~~~l 157 (235)
|+.++++|++.++.+|+++++|++|++ ++++|+|.+++|+.+ .||.||+| +|+++++.||....| .+.++.
T Consensus 111 ~~~l~~~l~~~~g~~i~~~~~V~~i~~--~~~~~~v~~~~g~~~-~ad~vV~A---~p~~~~~~ll~~~~~---~l~~~~ 181 (342)
T 3qj4_A 111 ISSIIKHYLKESGAEVYFRHRVTQINL--RDDKWEVSKQTGSPE-QFDLIVLT---MPVPEILQLQGDITT---LISECQ 181 (342)
T ss_dssp TTHHHHHHHHHHTCEEESSCCEEEEEE--CSSSEEEEESSSCCE-EESEEEEC---SCHHHHTTCBSTHHH---HSCHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEE--cCCEEEEEECCCCEE-EcCEEEEC---CCHHHHHHHhccccc---ccCHHH
Confidence 999999999977889999999999997 788999999888643 79999999 999999999851000 123356
Q ss_pred HHHhcCCCCcceEEEEEeccCCCCC-CCccceEecCCCcEEEEEeCCCCCCCCC--CCceEEEEcC-hhhhHHHhh
Q 026682 158 AVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSFQDSEVLSWAHCDSSKPGRSA--NRLCKDCNCT-NWTSKAFRS 229 (235)
Q Consensus 158 ~~~l~~v~~~p~~~v~~~~~~~~~~-~~~~g~~~~~~~~l~wi~~~ssKpgR~~--~~~~wvl~a~-~~~~~~~~~ 229 (235)
.+.+++++|.||++|++.|+++.+. .+++|++++++++++|++++|+||||.. .+.+||+|++ +|+.++++.
T Consensus 182 ~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~ 257 (342)
T 3qj4_A 182 RQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEH 257 (342)
T ss_dssp HHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTS
T ss_pred HHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcC
Confidence 8899999999999999999986332 5789998887767999999999999862 3468999987 899887764
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.87 E-value=1.8e-20 Score=162.81 Aligned_cols=194 Identities=27% Similarity=0.510 Sum_probs=159.9
Q ss_pred eecccCCCceecCChHHHHHHHHHHhCCccccccccceeEeccCcceeecccCCCCceEEeCCCchHHHHHHhcCCCCee
Q 026682 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVES 93 (235)
Q Consensus 14 ~~fDhGAqyft~~~~~f~~~v~~~~~~g~v~~W~~~~~~~~~~~g~~~~~~~~~~~~~yvg~~GM~~l~~~La~~l~~~i 93 (235)
..+|+|+++|...++.+.++++.|...+.+..|...+..... +.+.. ......+|+..+||+.|.++|++ +++|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~~~l~~--g~~i 122 (336)
T 1yvv_A 49 GALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHA--GRLSP--SPDEQVRWVGKPGMSAITRAMRG--DMPV 122 (336)
T ss_dssp EEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESS--SBCCC--CCTTSCEEEESSCTHHHHHHHHT--TCCE
T ss_pred CeEecCCCeEecCCHHHHHHHHHHHhCCCeeeccccceeccC--ccccc--CCCCCccEEcCccHHHHHHHHHc--cCcE
Confidence 469999999999999999999999988999999887665542 21211 23456789999999999999998 4579
Q ss_pred EcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCCCcchHHHHHhcCCCCcceEEEE
Q 026682 94 KFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173 (235)
Q Consensus 94 ~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~~~~~~l~~~l~~v~~~p~~~v~ 173 (235)
+++++|++|++ ++++|+|++++|+....||.||+| .|++++..++. ..+++...+..++|.+|++++
T Consensus 123 ~~~~~v~~i~~--~~~~~~v~~~~g~~~~~a~~vV~a---~g~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~ 189 (336)
T 1yvv_A 123 SFSCRITEVFR--GEEHWNLLDAEGQNHGPFSHVIIA---TPAPQASTLLA--------AAPKLASVVAGVKMDPTWAVA 189 (336)
T ss_dssp ECSCCEEEEEE--CSSCEEEEETTSCEEEEESEEEEC---SCHHHHGGGGT--------TCHHHHHHHTTCCEEEEEEEE
T ss_pred EecCEEEEEEE--eCCEEEEEeCCCcCccccCEEEEc---CCHHHHHHhhc--------cCHHHHHHHhhcCccceeEEE
Confidence 99999999997 778999999888754458999999 99998888773 246778889999999999999
Q ss_pred EeccCCCCCCCccceEecCCCcEEEEEeCCCCCCCCCCCceEEEEcC-hhhhHHHh
Q 026682 174 LAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNCT-NWTSKAFR 228 (235)
Q Consensus 174 ~~~~~~~~~~~~~g~~~~~~~~l~wi~~~ssKpgR~~~~~~wvl~a~-~~~~~~~~ 228 (235)
+.|+++.+ .+..++++.+ .+++|++++++||+|.+.+.+||++.+ +|+.++.+
T Consensus 190 ~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~ 243 (336)
T 1yvv_A 190 LAFETPLQ-TPMQGCFVQD-SPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLD 243 (336)
T ss_dssp EEESSCCS-CCCCEEEECS-SSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTT
T ss_pred EEecCCCC-CCCCeEEeCC-CceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHh
Confidence 99999866 5777877754 689999999999999863368999976 88776543
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.35 E-value=2.3e-12 Score=116.98 Aligned_cols=143 Identities=18% Similarity=0.166 Sum_probs=108.4
Q ss_pred eEEeCCCchHHHHHHhcCC---CCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEecCCCCCccchhcccCCC
Q 026682 71 KYVGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRP 146 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~l---~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p 146 (235)
.|...+||+.|+++|++.+ |++|+++++|++|++ .+++ |.|.++++ . ..||+||+| +|++++..|+.
T Consensus 226 ~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~--~~~~~~~v~~~~~-~-~~ad~vv~a---~p~~~~~~ll~-- 296 (477)
T 3nks_A 226 QWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSL--QAEGRWKVSLRDS-S-LEADHVISA---IPASVLSELLP-- 296 (477)
T ss_dssp EEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE--CGGGCEEEECSSC-E-EEESEEEEC---SCHHHHHHHSC--
T ss_pred EEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE--cCCceEEEEECCe-E-EEcCEEEEC---CCHHHHHHhcc--
Confidence 5788999999999998865 678999999999987 5656 99987544 3 379999999 99999999875
Q ss_pred CCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCCCccceEec---CCCcEEEEEeCCCCCCCC--CCCceEEEEcC-
Q 026682 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQ---DSEVLSWAHCDSSKPGRS--ANRLCKDCNCT- 220 (235)
Q Consensus 147 ~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~~~g~~~~---~~~~l~wi~~~ssKpgR~--~~~~~wvl~a~- 220 (235)
+..+++.+.+.+++|.|++++++.|+++.+..+..|++++ +..+++|++.+++.|++. ++...++++..
T Consensus 297 -----~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg 371 (477)
T 3nks_A 297 -----AEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGG 371 (477)
T ss_dssp -----GGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECH
T ss_pred -----ccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECC
Confidence 4567788899999999999999999998542233466665 334789986555557754 22234555554
Q ss_pred hhhhHHH
Q 026682 221 NWTSKAF 227 (235)
Q Consensus 221 ~~~~~~~ 227 (235)
+|+..+.
T Consensus 372 ~~~~~~~ 378 (477)
T 3nks_A 372 SWLQTLE 378 (477)
T ss_dssp HHHHHHH
T ss_pred ccccccc
Confidence 7776654
No 4
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.12 E-value=9.7e-11 Score=106.35 Aligned_cols=138 Identities=16% Similarity=0.127 Sum_probs=101.4
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEe---CCCcccccccEEEecCCCCCccchhcccCC
Q 026682 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG---LDGQSLGQFNGVVASDKNVVSPRFRDVTGR 145 (235)
Q Consensus 69 ~~~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~---~~G~~~~~~d~VVlA~~~~pap~~~~ll~~ 145 (235)
...|...+||++|+++|++.++.+|+++++|++|.+ ++++|.|.+ .+|+. ..||+||+| +|++.+..++.
T Consensus 228 ~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~~~v~~~~~~~g~~-~~ad~vV~a---~~~~~~~~ll~- 300 (478)
T 2ivd_A 228 GALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAR--EDGGWRLIIEEHGRRAE-LSVAQVVLA---APAHATAKLLR- 300 (478)
T ss_dssp CCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEEC--C--CCEEEEEETTEEEE-EECSEEEEC---SCHHHHHHHHT-
T ss_pred ccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEe--cCCeEEEEEeecCCCce-EEcCEEEEC---CCHHHHHHHhh-
Confidence 456888999999999999988778999999999987 667899987 66654 379999999 99999888873
Q ss_pred CCCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCC-CccceEecC--CCcEEEEEeCCCC-CCCCCCC-ceEEEEc
Q 026682 146 PPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-PVKGFSFQD--SEVLSWAHCDSSK-PGRSANR-LCKDCNC 219 (235)
Q Consensus 146 p~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~-~~~g~~~~~--~~~l~wi~~~ssK-pgR~~~~-~~wvl~a 219 (235)
++.++..+.+++++|.+++++++.|+++.+.. ...|++++. +.++.++.+++++ |++.+.+ .+++++.
T Consensus 301 ------~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~ 373 (478)
T 2ivd_A 301 ------PLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMV 373 (478)
T ss_dssp ------TTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEE
T ss_pred ------ccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEe
Confidence 35566778899999999999999999875422 223344432 2345555566655 6664422 3566663
No 5
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.07 E-value=3.2e-10 Score=102.19 Aligned_cols=134 Identities=10% Similarity=0.110 Sum_probs=99.5
Q ss_pred eEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCC
Q 026682 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~ 149 (235)
.|...+||++|+++|++.++.+|+++++|++|.. ++++ |.|.+ +|+. ..+|.||+| +|.+.+..++..|
T Consensus 207 ~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~~v~v~~-~~~~-~~ad~VI~a---~p~~~~~~l~~~p--- 276 (453)
T 2yg5_A 207 DKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKW--NESGATVLAD-GDIR-VEASRVILA---VPPNLYSRISYDP--- 276 (453)
T ss_dssp CEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEE--ETTEEEEEET-TTEE-EEEEEEEEC---SCGGGGGGSEEES---
T ss_pred eEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEE--eCCceEEEEE-CCeE-EEcCEEEEc---CCHHHHhcCEeCC---
Confidence 4778999999999999988888999999999987 6677 99886 5544 368999999 9998877775212
Q ss_pred CCCcchHHHHHhcCCCCcceEEEEEeccCCCCC-CCccceEecCCCcEEEEEeCCCCCCCCCCCceEEEEc
Q 026682 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSFQDSEVLSWAHCDSSKPGRSANRLCKDCNC 219 (235)
Q Consensus 150 ~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~-~~~~g~~~~~~~~l~wi~~~ssKpgR~~~~~~wvl~a 219 (235)
.+.+...+.+++++|.++..+++.|+++.+. .++.|..+..+.++.++.+++ +|.... ..++.+.
T Consensus 277 --~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~--~~l~~~~ 342 (453)
T 2yg5_A 277 --PLPRRQHQMHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYDNT-NHEDDR--GTLVAFV 342 (453)
T ss_dssp --CCCHHHHHHGGGEEECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEECC-CTTCSS--EEEEEEE
T ss_pred --CCCHHHHHHHhcCCCcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEeCC-CCCCCC--CEEEEEe
Confidence 3445667788999999999999999998652 234555555556788885554 443221 3566664
No 6
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.06 E-value=4.1e-10 Score=101.46 Aligned_cols=110 Identities=12% Similarity=0.141 Sum_probs=88.4
Q ss_pred ceEEeCCCchHHHHHHhcCCC-CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCC
Q 026682 70 KKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPP 148 (235)
Q Consensus 70 ~~yvg~~GM~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~ 148 (235)
..+...+||+.|+++|++.+. .+|+++++|++|++ ++++|.|.+++|+. ..||+||+| +|++.+..++.-|
T Consensus 226 ~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~~~v~~~~g~~-~~ad~vi~a---~p~~~~~~l~~~~-- 297 (470)
T 3i6d_A 226 QFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSH--SGSCYSLELDNGVT-LDADSVIVT---APHKAAAGMLSEL-- 297 (470)
T ss_dssp -EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEE--CSSSEEEEESSSCE-EEESEEEEC---SCHHHHHHHTTTS--
T ss_pred eEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEE--cCCeEEEEECCCCE-EECCEEEEC---CCHHHHHHHcCCc--
Confidence 456778999999999999885 58999999999997 77889999988864 379999999 9999999887411
Q ss_pred CCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCCC--ccceEecCCC
Q 026682 149 LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP--VKGFSFQDSE 194 (235)
Q Consensus 149 ~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~--~~g~~~~~~~ 194 (235)
.+.+.++.++|.|+.++++.|+++.+..+ ..|++++.++
T Consensus 298 -------~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~ 338 (470)
T 3i6d_A 298 -------PAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNS 338 (470)
T ss_dssp -------TTHHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTT
T ss_pred -------hhhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCC
Confidence 23577899999999999999999865323 3455565443
No 7
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.05 E-value=8.9e-10 Score=101.42 Aligned_cols=123 Identities=11% Similarity=0.119 Sum_probs=96.2
Q ss_pred ceEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCC
Q 026682 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (235)
Q Consensus 70 ~~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~ 149 (235)
..+...+||++|+++|++.++.+|+++++|++|+. ++++|.|.+.+|+.+ .||.||+| +|...+..++..|
T Consensus 206 ~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~VI~a---~p~~~l~~l~~~p--- 276 (520)
T 1s3e_A 206 QERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ--TRENVLVETLNHEMY-EAKYVISA---IPPTLGMKIHFNP--- 276 (520)
T ss_dssp TSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEEC--SSSSEEEEETTSCEE-EESEEEEC---SCGGGGGGSEEES---
T ss_pred ceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEE--CCCeEEEEECCCeEE-EeCEEEEC---CCHHHHcceeeCC---
Confidence 34677999999999999988888999999999987 778899998888653 79999999 9999887775322
Q ss_pred CCCcchHHHHHhcCCCCcceEEEEEeccCCCCC-CCccceEe--cCCCcEEEEEeCC
Q 026682 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSF--QDSEVLSWAHCDS 203 (235)
Q Consensus 150 ~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~-~~~~g~~~--~~~~~l~wi~~~s 203 (235)
++.+...+.++.++|.++..+++.|+++.+. .++.|..+ ..+.++.++.+.+
T Consensus 277 --~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~ 331 (520)
T 1s3e_A 277 --PLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDT 331 (520)
T ss_dssp --CCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECC
T ss_pred --CCCHHHHHHHHhCCCcceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCC
Confidence 3445667889999999999999999998653 23445444 3445777775444
No 8
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.94 E-value=2.1e-09 Score=97.54 Aligned_cols=108 Identities=13% Similarity=0.224 Sum_probs=87.1
Q ss_pred CceEEeCCCchHHHHHHhcCCC-CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCC
Q 026682 69 NKKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (235)
Q Consensus 69 ~~~yvg~~GM~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~ 147 (235)
...+...+||++|+++|++.+. .+|+++++|++|++ .+++|.|++.+| . ..||+||+| +|++.+..++.-|
T Consensus 226 ~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~~~v~~~~g-~-~~ad~vV~a---~p~~~~~~ll~~~- 297 (475)
T 3lov_A 226 GQFLSLETGLESLIERLEEVLERSEIRLETPLLAISR--EDGRYRLKTDHG-P-EYADYVLLT---IPHPQVVQLLPDA- 297 (475)
T ss_dssp CSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEE--ETTEEEEECTTC-C-EEESEEEEC---SCHHHHHHHCTTS-
T ss_pred CcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEE--eCCEEEEEECCC-e-EECCEEEEC---CCHHHHHHHcCcc-
Confidence 3457789999999999999886 68999999999997 677899999888 3 479999999 9999999987421
Q ss_pred CCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCCCcc--ceEecCCC
Q 026682 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVK--GFSFQDSE 194 (235)
Q Consensus 148 ~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~~~--g~~~~~~~ 194 (235)
++ +.++.++|.|++++++.|+++.. .+.+ |++++.++
T Consensus 298 ----~~-----~~~~~~~~~~~~~v~l~~~~~~~-~~~~g~g~l~~~~~ 336 (475)
T 3lov_A 298 ----HL-----PELEQLTTHSTATVTMIFDQQQS-LPIEGTGFVVNRRA 336 (475)
T ss_dssp ----CC-----HHHHTCCEEEEEEEEEEEECCSS-CSSSSSEEEECTTS
T ss_pred ----CH-----HHHhcCCCCeEEEEEEEECCcCC-CCCCCEEEEecCCC
Confidence 11 67889999999999999999863 3444 45555433
No 9
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.91 E-value=3e-09 Score=97.53 Aligned_cols=133 Identities=8% Similarity=-0.018 Sum_probs=99.0
Q ss_pred eCCCchHHHHHHhcCCCC-eeEcC--eeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCC
Q 026682 74 GVPGMNSICKALCHQPGV-ESKFG--VGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLD 150 (235)
Q Consensus 74 g~~GM~~l~~~La~~l~~-~i~~~--~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~ 150 (235)
..+||++|+++|++.++. +|+++ ++|++|.+ ++++|++ .+|+. ..||+||+| +|++++..++....+
T Consensus 211 ~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~--~~~~v~~--~~G~~-~~ad~VI~a---~p~~~~~~ll~~~~~-- 280 (484)
T 4dsg_A 211 QRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDA--DAKTITF--SNGEV-VSYDYLIST---VPFDNLLRMTKGTGF-- 280 (484)
T ss_dssp SSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEET--TTTEEEE--TTSCE-EECSEEEEC---SCHHHHHHHEECSSC--
T ss_pred cCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEe--cCCEEEE--CCCCE-EECCEEEEC---CCHHHHHHHhhccCC--
Confidence 458999999999998863 79999 56999996 6677765 56754 369999999 999999999841000
Q ss_pred CCcchHHHHHhcCCCCcceEEEEEeccCCCCC--CCccceEecCCC-cEEEEEeCCCC-CCCCCCCceEEEE
Q 026682 151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFSFQDSE-VLSWAHCDSSK-PGRSANRLCKDCN 218 (235)
Q Consensus 151 ~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~--~~~~g~~~~~~~-~l~wi~~~ssK-pgR~~~~~~wvl~ 218 (235)
++.+++.+.++.++|.++.++.++|+.+... .+..++++++.+ ++..+..-++| |++.++ ..|++.
T Consensus 281 -~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~-g~~~l~ 350 (484)
T 4dsg_A 281 -KGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPE-GHWSLM 350 (484)
T ss_dssp -TTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCT-TEEEEE
T ss_pred -CCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCC-CeEEEE
Confidence 2456778889999999999999999987321 356777777543 55666666666 777653 366664
No 10
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.89 E-value=1.6e-09 Score=98.77 Aligned_cols=126 Identities=13% Similarity=0.060 Sum_probs=95.1
Q ss_pred CceEEeCCCchHHHHHHhcCCC-CeeEcCeeEEEEEeecCCCCeEEEeCCCc--ccccccEEEecCCCCCccchhcccCC
Q 026682 69 NKKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQ--SLGQFNGVVASDKNVVSPRFRDVTGR 145 (235)
Q Consensus 69 ~~~yvg~~GM~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~--~~~~~d~VVlA~~~~pap~~~~ll~~ 145 (235)
...|...+||++|+++|++.++ .+|+++++|++|++ .+++|.|.+.+|. ....||+||+| +|...+..++.
T Consensus 229 ~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~~~~~ad~vI~a---~p~~~l~~l~~- 302 (489)
T 2jae_A 229 MMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKN--VSEGVTVEYTAGGSKKSITADYAICT---IPPHLVGRLQN- 302 (489)
T ss_dssp SSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEE--ETTEEEEEEEETTEEEEEEESEEEEC---SCHHHHTTSEE-
T ss_pred ccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEE--cCCeEEEEEecCCeEEEEECCEEEEC---CCHHHHHhCcc-
Confidence 3567889999999999999887 78999999999997 6778999887762 22479999999 98887766652
Q ss_pred CCCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCC--CCccceEecCCCcEEEEEeCCCCC
Q 026682 146 PPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFSFQDSEVLSWAHCDSSKP 206 (235)
Q Consensus 146 p~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~--~~~~g~~~~~~~~l~wi~~~ssKp 206 (235)
++.+...+.+++++|.++.++.+.|+++.+. ....|.....+.++..+.+.|.+.
T Consensus 303 ------~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~ 359 (489)
T 2jae_A 303 ------NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHY 359 (489)
T ss_dssp ------CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSST
T ss_pred ------CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCC
Confidence 3445677889999999999999999997542 133432322234666776776653
No 11
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.81 E-value=7.2e-09 Score=94.55 Aligned_cols=124 Identities=15% Similarity=0.215 Sum_probs=95.8
Q ss_pred eEEeCCCchHHHHHHhcCC---C-CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCC
Q 026682 71 KYVGVPGMNSICKALCHQP---G-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRP 146 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~l---~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p 146 (235)
.|...+||..|++.|++.+ + ++|+++++|++|+. .+++|.|.+.+|+. ..||+||+| +|.+.+..++-.|
T Consensus 247 ~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~-~~ad~vI~a---~~~~~l~~i~~~p 320 (495)
T 2vvm_A 247 SYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVN--ERDAARVTARDGRE-FVAKRVVCT---IPLNVLSTIQFSP 320 (495)
T ss_dssp SEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEE--CSSSEEEEETTCCE-EEEEEEEEC---CCGGGGGGSEEES
T ss_pred eEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEE--cCCEEEEEECCCCE-EEcCEEEEC---CCHHHHhheeeCC
Confidence 5678899999999998864 3 56999999999997 67789999888854 379999999 9998887775212
Q ss_pred CCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCCCccceEecCCCcEEEEEeCCCCCC
Q 026682 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPG 207 (235)
Q Consensus 147 ~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~~~g~~~~~~~~l~wi~~~ssKpg 207 (235)
++.+...++++.+.|.++..+.+.|+++.+ .++.|+...+ .++.++..++..|+
T Consensus 321 -----~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~-~~~~g~~~~~-~~~~~~~~~~~~~~ 374 (495)
T 2vvm_A 321 -----ALSTERISAMQAGHVSMCTKVHAEVDNKDM-RSWTGIAYPF-NKLCYAIGDGTTPA 374 (495)
T ss_dssp -----CCCHHHHHHHHHCCCCCCEEEEEEESCGGG-GGEEEEECSS-CSSCEEEEEEECTT
T ss_pred -----CCCHHHHHHHHhcCCCceeEEEEEECCccC-CCceeEecCC-CCcEEEecCCCCCC
Confidence 344566778889999999999999999764 3566655543 47788876665553
No 12
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.74 E-value=5.9e-08 Score=86.40 Aligned_cols=130 Identities=12% Similarity=0.044 Sum_probs=96.2
Q ss_pred EEeCCCchHHHHHHhcCC---CCeeEcCeeEEEEEeecCCCCeE-EEeCCCcccccccEEEecCCCCCccchhcccCCCC
Q 026682 72 YVGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (235)
Q Consensus 72 yvg~~GM~~l~~~La~~l---~~~i~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~ 147 (235)
+...+||..|++.|++.+ |.+|+++++|++|.. ++++|. |..+ |+. ..+|.||+| ++++.+..|+.-+.
T Consensus 189 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~~~~~~gv~~~-g~~-~~ad~VV~a---~~~~~~~~ll~~~~ 261 (425)
T 3ka7_A 189 GIPEGGCKGIIDALETVISANGGKIHTGQEVSKILI--ENGKAAGIIAD-DRI-HDADLVISN---LGHAATAVLCSEAL 261 (425)
T ss_dssp EEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEET-TEE-EECSEEEEC---SCHHHHHHHTTTTC
T ss_pred cccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEE--ECCEEEEEEEC-CEE-EECCEEEEC---CCHHHHHHhcCCcc
Confidence 456789999999988754 689999999999997 667786 6654 544 368999999 99999988874111
Q ss_pred CCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCCCccceEecCC-CcEEEEEeCCCC-CCCCCCC
Q 026682 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS-EVLSWAHCDSSK-PGRSANR 212 (235)
Q Consensus 148 ~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~~~g~~~~~~-~~l~wi~~~ssK-pgR~~~~ 212 (235)
..+..++..+.++.++|.+..++.++|++++. +..++++..+ ..+..+...|.+ |++++.+
T Consensus 262 --~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G 324 (425)
T 3ka7_A 262 --SKEADAAYFKMVGTLQPSAGIKICLAADEPLV--GHTGVLLTPYTRRINGVNEVTQADPELAPPG 324 (425)
T ss_dssp --CTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--CSSSEEECCSSSSEEEEECGGGTCGGGSCTT
T ss_pred --cccCCHHHHHHhhCcCCCceEEEEeecCCCcc--CcCEEEECCChhhcceEEeccCCCCCcCCCC
Confidence 00114566778889999999999999999743 4566666533 357777777776 8887643
No 13
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.74 E-value=2.2e-08 Score=91.37 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=90.7
Q ss_pred ceEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcc---cccccEEEecCCCCCccchhcccCCC
Q 026682 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS---LGQFNGVVASDKNVVSPRFRDVTGRP 146 (235)
Q Consensus 70 ~~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~---~~~~d~VVlA~~~~pap~~~~ll~~p 146 (235)
..|...+||+.|+++|++.++.+|+++++|++|++ .+++|.|.+.+|+. ...+|+||+| +|...+..++-.|
T Consensus 232 ~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~--~~~~v~v~~~~~~~~~~~~~ad~vI~t---~p~~~~~~i~f~p 306 (498)
T 2iid_A 232 RFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQ--NDQKVTVVYETLSKETPSVTADYVIVC---TTSRAVRLIKFNP 306 (498)
T ss_dssp CEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEE--CSSCEEEEEECSSSCCCEEEESEEEEC---SCHHHHTTSEEES
T ss_pred ceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEE--CCCeEEEEEecCCcccceEEeCEEEEC---CChHHHhheecCC
Confidence 34567899999999999987668999999999997 77889998877643 1369999999 9887665553112
Q ss_pred CCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCC-Cc-cceEecCCCcEEEEEeCC
Q 026682 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-PV-KGFSFQDSEVLSWAHCDS 203 (235)
Q Consensus 147 ~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~-~~-~g~~~~~~~~l~wi~~~s 203 (235)
++.+...+++++++|.+...+.+.|+++.|.. +. .+..+.+ .+..++...+
T Consensus 307 -----~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~s 359 (498)
T 2iid_A 307 -----PLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTD-LPSRFIYYPN 359 (498)
T ss_dssp -----CCCHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEES-STTCEEECCS
T ss_pred -----CCCHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCC-CCcceEEECC
Confidence 35556778899999999999999999986531 11 2332333 3455666654
No 14
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.72 E-value=4.3e-08 Score=87.55 Aligned_cols=127 Identities=12% Similarity=0.033 Sum_probs=95.1
Q ss_pred eEEeCCCchHHHHHHhcC---CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCC
Q 026682 71 KYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~ 147 (235)
.+...+||..|+++|++. .|.+|+++++|++|.. ++++| +. .+|+. ..+|.||+| ++++.+.+|++.+
T Consensus 181 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~~~~v-V~-~~g~~-~~ad~Vv~a---~~~~~~~~ll~~~- 251 (421)
T 3nrn_A 181 PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINI--EEKKV-YT-RDNEE-YSFDVAISN---VGVRETVKLIGRD- 251 (421)
T ss_dssp CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEET--TTTEE-EE-TTCCE-EECSEEEEC---SCHHHHHHHHCGG-
T ss_pred cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE--ECCEE-EE-eCCcE-EEeCEEEEC---CCHHHHHHhcCcc-
Confidence 356688999999999874 4689999999999986 77789 74 45544 379999999 9999999988511
Q ss_pred CCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCCCccceEecCCCcEEEEEeCCCC-CCCCCCC
Q 026682 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSK-PGRSANR 212 (235)
Q Consensus 148 ~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~~~g~~~~~~~~l~wi~~~ssK-pgR~~~~ 212 (235)
.+.++..+.+.++.|.+++++.++++++. .+..++++..+..+..+...|.+ |.+++.+
T Consensus 252 ----~~~~~~~~~~~~~~~~~~~~v~l~~~~~~--~~~~~~~~~~~~~~~~i~~~s~~~p~~ap~G 311 (421)
T 3nrn_A 252 ----YFDRDYLKQVDSIEPSEGIKFNLAVPGEP--RIGNTIVFTPGLMINGFNEPSALDKSLAREG 311 (421)
T ss_dssp ----GSCHHHHHHHHTCCCCCEEEEEEEEESSC--SSCSSEEECTTSSSCEEECGGGTCGGGSCTT
T ss_pred ----cCCHHHHHHHhCCCCCceEEEEEEEcCCc--ccCCeEEEcCCcceeeEeccCCCCCCcCCCC
Confidence 23446677889999999999999999873 23456665543336667677766 7777643
No 15
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.53 E-value=2.1e-07 Score=88.47 Aligned_cols=101 Identities=10% Similarity=0.106 Sum_probs=80.6
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC------CcccccccEEEecCCCCCccchhcc
Q 026682 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD------GQSLGQFNGVVASDKNVVSPRFRDV 142 (235)
Q Consensus 69 ~~~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~------G~~~~~~d~VVlA~~~~pap~~~~l 142 (235)
...|..++||++|+++|++.+ +|+++++|++|++ .+++|+|++.+ |+. ..||+||+| +|...+..+
T Consensus 391 g~~~~~~gG~~~l~~~La~~l--~I~l~~~V~~I~~--~~~~v~V~~~~~~~~~~~~~-~~Ad~VI~t---vP~~vL~~l 462 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRY--TASGCEVIAVNTRSTSQTFI-YKCDAVLCT---LPLGVLKQQ 462 (662)
T ss_dssp SCCEEETTCTTHHHHHHTTTC--EEETTEEEEEEEE--ETTEEEEEEEESSCTTCEEE-EEESEEEEC---CCHHHHHCS
T ss_pred CceeeecCcHHHHHHHHHhcC--ceecCCeEEEEEE--CCCcEEEEEeecccCCCCeE-EEeCEEEEC---CCHHHHhcc
Confidence 346888999999999999865 6999999999998 67789998654 333 379999999 998877664
Q ss_pred cC----CCCCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCC
Q 026682 143 TG----RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (235)
Q Consensus 143 l~----~p~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~ 182 (235)
.+ .| ++.+...++++.++|.++..+.+.|+++.|.
T Consensus 463 ~~~i~f~P-----~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~ 501 (662)
T 2z3y_A 463 PPAVQFVP-----PLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 501 (662)
T ss_dssp SCSSEEES-----CCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred cCceEEcC-----CCCHHHHHHHHhCCccceeEEEEEcCccccc
Confidence 21 12 3444566789999999999999999999874
No 16
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.51 E-value=2.7e-07 Score=84.15 Aligned_cols=112 Identities=14% Similarity=0.224 Sum_probs=80.4
Q ss_pred ceEEeCCCchHHHHHHhcCCC-CeeEcCeeEEEEEeecCCCC------eEEEeC--CCc--ccccccEEEecCCCCCccc
Q 026682 70 KKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNL------WSVSGL--DGQ--SLGQFNGVVASDKNVVSPR 138 (235)
Q Consensus 70 ~~yvg~~GM~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~------w~l~~~--~G~--~~~~~d~VVlA~~~~pap~ 138 (235)
..|...+||++|+++|++.++ .+|+++++|++|.+ .+++ |.|... +|. ....||+||+| +|.+.
T Consensus 234 ~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~--~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a---~p~~~ 308 (504)
T 1sez_A 234 GSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSC--SCTEDSAIDSWSIISASPHKRQSEEESFDAVIMT---APLCD 308 (504)
T ss_dssp SCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEE--ECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEEC---SCHHH
T ss_pred ceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEe--cCCCCcccceEEEEEcCCCCccceeEECCEEEEC---CCHHH
Confidence 356779999999999999887 78999999999987 5555 888764 452 12369999999 99999
Q ss_pred hhcccCCCCCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCCCCc--cceEec
Q 026682 139 FRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV--KGFSFQ 191 (235)
Q Consensus 139 ~~~ll~~p~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~~--~g~~~~ 191 (235)
+..++. ++. ..++.++ .+..+.|.++.++.+.|+++.+..+. .|++++
T Consensus 309 l~~ll~-~~~-~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~ 358 (504)
T 1sez_A 309 VKSMKI-AKR-GNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVP 358 (504)
T ss_dssp HHTSEE-ESS-SSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECC
T ss_pred HHHHhh-ccc-CCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcC
Confidence 988872 000 0012222 27788999999999999987432222 345454
No 17
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.51 E-value=8.4e-07 Score=80.48 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=79.3
Q ss_pred CCCchHHHHHHhcCC-----------CCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhccc
Q 026682 75 VPGMNSICKALCHQP-----------GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVT 143 (235)
Q Consensus 75 ~~GM~~l~~~La~~l-----------~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll 143 (235)
.+||.+|+++|++.+ +.+|+++++|++|+. .+++|.|.+.+|+.+ .+|+||+| +|...+..++
T Consensus 202 ~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~vI~a---~~~~~l~~~~ 275 (472)
T 1b37_A 202 QRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY--SPGGVTVKTEDNSVY-SADYVMVS---ASLGVLQSDL 275 (472)
T ss_dssp TTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE--CSSCEEEEETTSCEE-EESEEEEC---SCHHHHHTTS
T ss_pred CCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE--cCCcEEEEECCCCEE-EcCEEEEe---cCHHHhccCC
Confidence 689999999999875 457999999999997 778899999888653 79999999 9988877754
Q ss_pred CCCCCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCC
Q 026682 144 GRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (235)
Q Consensus 144 ~~p~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~ 182 (235)
-.-.| ++.+...++++.+.|.++..+.+.|+++.+.
T Consensus 276 ~~~~p---~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~ 311 (472)
T 1b37_A 276 IQFKP---KLPTWKVRAIYQFDMAVYTKIFLKFPRKFWP 311 (472)
T ss_dssp SEEES---CCCHHHHHHHHHSEEECEEEEEEECSSCCSC
T ss_pred eeECC---CCCHHHHHHHHhcCCcceeEEEEECCCcCCC
Confidence 10000 3445567788889999999999999998763
No 18
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.47 E-value=3.5e-07 Score=89.25 Aligned_cols=105 Identities=9% Similarity=0.066 Sum_probs=80.7
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC------CcccccccEEEecCCCCCccchhcc
Q 026682 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD------GQSLGQFNGVVASDKNVVSPRFRDV 142 (235)
Q Consensus 69 ~~~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~------G~~~~~~d~VVlA~~~~pap~~~~l 142 (235)
...|..++||+.|+++|++.+ +|+++++|++|.+ .+++|+|++.+ |+. ..+|+||+| +|...+..+
T Consensus 562 g~~~~~~gG~~~L~~aLa~~l--~I~Lnt~V~~I~~--~~~gV~V~~~~~~~~~~g~~-i~AD~VIvT---vPl~vLk~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRY--TASGCEVIAVNTRSTSQTFI-YKCDAVLCT---LPLGVLKQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTTC--CEECSEEEEEEEE--ETTEEEEEEEESSSTTCEEE-EEESEEEEC---CCHHHHHCS
T ss_pred CceEEecCcHHHHHHHHHhCC--CEEeCCeEEEEEE--cCCcEEEEEeecccCCCCeE-EECCEEEEC---CCHHHHHhh
Confidence 346888999999999999865 5999999999998 67789988654 333 379999999 999887764
Q ss_pred cCCCCCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCC
Q 026682 143 TGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (235)
Q Consensus 143 l~~p~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~ 182 (235)
++.. ....++.+...++++.++|.++..+.+.|++++|.
T Consensus 634 ~~~I-~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~ 672 (852)
T 2xag_A 634 PPAV-QFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 672 (852)
T ss_dssp SCSS-EEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred hccc-ccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccC
Confidence 3200 00003344556779999999999999999999874
No 19
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.32 E-value=3.4e-06 Score=77.42 Aligned_cols=100 Identities=15% Similarity=0.142 Sum_probs=76.6
Q ss_pred CchHHHHHHhcCCC-CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCC-------
Q 026682 77 GMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPP------- 148 (235)
Q Consensus 77 GM~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~------- 148 (235)
||++|++.|++.+. .+|+++++|++|.+ .+++++.|.+.+|+.+ .||.||+| +|...+...+. +..
T Consensus 200 g~~~l~~~l~~~l~~~~i~~~~~V~~I~~-~~~~~v~v~~~~g~~~-~ad~VI~t---~p~~~l~~~~~-~~~~~~~~i~ 273 (516)
T 1rsg_A 200 NYDSVVQRIAQSFPQNWLKLSCEVKSITR-EPSKNVTVNCEDGTVY-NADYVIIT---VPQSVLNLSVQ-PEKNLRGRIE 273 (516)
T ss_dssp CHHHHHHHHHTTSCGGGEETTCCEEEEEE-CTTSCEEEEETTSCEE-EEEEEEEC---CCHHHHHGGGS-SCSCSTTCCE
T ss_pred CHHHHHHHHHHhCCCCEEEECCEEEEEEE-cCCCeEEEEECCCcEE-ECCEEEEC---CCHHHhhhccc-cccccccceE
Confidence 39999999999875 57999999999986 1256799999888643 69999999 88776643210 000
Q ss_pred CCCCcchHHHHHhcCCCCcceEEEEEeccCCCCC
Q 026682 149 LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (235)
Q Consensus 149 ~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~ 182 (235)
...++.+...++++++.|.+...+.+.|+++.|.
T Consensus 274 f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 274 FQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWS 307 (516)
T ss_dssp EESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSC
T ss_pred ecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCC
Confidence 0003455678889999999999999999999874
No 20
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.26 E-value=2.3e-06 Score=82.82 Aligned_cols=101 Identities=13% Similarity=0.155 Sum_probs=80.9
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhccc-C-CC
Q 026682 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVT-G-RP 146 (235)
Q Consensus 69 ~~~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll-~-~p 146 (235)
...+...+||..|.++|++.+ +|+++++|++|++ ++++|.|.+.+|+. ..+|+||+| +|...+.... . .|
T Consensus 524 G~~~~~~~G~~~l~~aLa~gl--~I~l~t~V~~I~~--~~~~v~V~~~~G~~-i~Ad~VIvA---~P~~vL~~~~i~f~P 595 (776)
T 4gut_A 524 GDHTLLTPGYSVIIEKLAEGL--DIQLKSPVQCIDY--SGDEVQVTTTDGTG-YSAQKVLVT---VPLALLQKGAIQFNP 595 (776)
T ss_dssp SCEEECTTCTHHHHHHHHTTS--CEESSCCEEEEEC--SSSSEEEEETTCCE-EEESEEEEC---CCHHHHHTTCSEEES
T ss_pred CCeEEECChHHHHHHHHHhCC--cEEcCCeeEEEEE--cCCEEEEEECCCcE-EEcCEEEEC---CCHHHHhhcccccCC
Confidence 345677899999999999854 6999999999997 77889999988864 379999999 8887665421 0 11
Q ss_pred CCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCC
Q 026682 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (235)
Q Consensus 147 ~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~ 182 (235)
++.+...++++.+.|.+...+.+.|+++.|.
T Consensus 596 -----~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~ 626 (776)
T 4gut_A 596 -----PLSEKKMKAINSLGAGIIEKIALQFPYRFWD 626 (776)
T ss_dssp -----CCCHHHHHHHHHEEEECCEEEEEECSSCTTH
T ss_pred -----CCCHHHHHHHHhCCCeeEEEEEEecCccccc
Confidence 3455667888999999999999999998763
No 21
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.21 E-value=6.8e-06 Score=73.14 Aligned_cols=95 Identities=14% Similarity=0.143 Sum_probs=77.2
Q ss_pred eCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCCCc
Q 026682 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTF 153 (235)
Q Consensus 74 g~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~~~ 153 (235)
..+||..+++.|++.++ +|+++++|++|+. +++++.|.+.+|+. ..+|.||+| +|.+.+..+.-.| ++
T Consensus 202 ~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~--~~~~v~v~~~~g~~-~~ad~vi~a---~~~~~l~~i~~~p-----~l 269 (431)
T 3k7m_X 202 FSNGSADLVDAMSQEIP-EIRLQTVVTGIDQ--SGDVVNVTVKDGHA-FQAHSVIVA---TPMNTWRRIVFTP-----AL 269 (431)
T ss_dssp ETTCTHHHHHHHHTTCS-CEESSCCEEEEEC--SSSSEEEEETTSCC-EEEEEEEEC---SCGGGGGGSEEES-----CC
T ss_pred cCCcHHHHHHHHHhhCC-ceEeCCEEEEEEE--cCCeEEEEECCCCE-EEeCEEEEe---cCcchHhheeeCC-----CC
Confidence 48899999999999888 8999999999986 77789999988864 379999999 8888776653222 34
Q ss_pred chHHHHHhcCCCCcceEEEEEeccCCC
Q 026682 154 APDLAVKLEEIPVNPCFALMLAFSEPL 180 (235)
Q Consensus 154 ~~~l~~~l~~v~~~p~~~v~~~~~~~~ 180 (235)
.+...+++..+.|.+...+.+.|+.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 270 PERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp CHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred CHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 444556778888999999999999875
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.12 E-value=5e-06 Score=73.94 Aligned_cols=85 Identities=13% Similarity=0.101 Sum_probs=67.9
Q ss_pred eEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCC
Q 026682 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLD 150 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~ 150 (235)
.|...+||+.++++|++.++.+|+++++|++|++ .+++|.|.+++|+ ..||+||+| +|++++..++.
T Consensus 198 ~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~--~~~~v~v~~~~g~--~~ad~Vv~a---~~~~~~~~~l~------ 264 (424)
T 2b9w_A 198 LWTWADGTQAMFEHLNATLEHPAERNVDITRITR--EDGKVHIHTTDWD--RESDVLVLT---VPLEKFLDYSD------ 264 (424)
T ss_dssp CBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEEC--CTTCEEEEESSCE--EEESEEEEC---SCHHHHTTSBC------
T ss_pred eEEeCChHHHHHHHHHHhhcceEEcCCEEEEEEE--ECCEEEEEECCCe--EEcCEEEEC---CCHHHHhhccC------
Confidence 4456789999999999988778999999999987 6778999888885 379999999 99988877763
Q ss_pred CCcchHHHHHhcCCCCcceE
Q 026682 151 LTFAPDLAVKLEEIPVNPCF 170 (235)
Q Consensus 151 ~~~~~~l~~~l~~v~~~p~~ 170 (235)
..++..+.+.++.|.+..
T Consensus 265 --~~~~~~~~~~~~~~~~~~ 282 (424)
T 2b9w_A 265 --ADDDEREYFSKIIHQQYM 282 (424)
T ss_dssp --CCHHHHHHHTTCEEEEEE
T ss_pred --CCHHHHHHHhcCCcceeE
Confidence 234444567888887744
No 23
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.07 E-value=7.4e-06 Score=74.43 Aligned_cols=100 Identities=15% Similarity=0.112 Sum_probs=58.7
Q ss_pred eEEeCCCchHHHHHHhcC---CCCeeEcCeeEEEEEeecCCCCeE-EEeCCCcccccccEEEecCCCCCccchhcccCCC
Q 026682 71 KYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRP 146 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p 146 (235)
.|.-.+||++|+++|++. .|.+|+++++|++|.. +++++. |.+++|+.+ .+|.||++ ++++.+...| ++
T Consensus 213 ~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~--~~~~~~gV~~~~g~~~-~ad~VV~~---a~~~~~~~~L-l~ 285 (501)
T 4dgk_A 213 VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMET--TGNKIEAVHLEDGRRF-LTQAVASN---ADVVHTYRDL-LS 285 (501)
T ss_dssp EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTSCEE-ECSCEEEC---CC-----------
T ss_pred eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEe--eCCeEEEEEecCCcEE-EcCEEEEC---CCHHHHHHHh-cc
Confidence 355689999999999874 4789999999999987 667776 788888764 68999999 8777766544 12
Q ss_pred CCCCCCcchHHHHHhcCCCCc-ceEEEEEeccCCC
Q 026682 147 PPLDLTFAPDLAVKLEEIPVN-PCFALMLAFSEPL 180 (235)
Q Consensus 147 ~~~~~~~~~~l~~~l~~v~~~-p~~~v~~~~~~~~ 180 (235)
.. +........++..++. +++++.++++.+.
T Consensus 286 ~~---~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 317 (501)
T 4dgk_A 286 QH---PAAVKQSNKLQTKRMSNSLFVLYFGLNHHH 317 (501)
T ss_dssp --------------------CCEEEEEEEEESSCC
T ss_pred cc---ccchhhhhhhhccccCCceeEEEecccCCc
Confidence 11 1122334455666555 4667777888764
No 24
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.98 E-value=1.6e-05 Score=72.14 Aligned_cols=90 Identities=10% Similarity=0.072 Sum_probs=73.0
Q ss_pred EeCCCchHHHHHHhcCCC---CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCC
Q 026682 73 VGVPGMNSICKALCHQPG---VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (235)
Q Consensus 73 vg~~GM~~l~~~La~~l~---~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~ 149 (235)
...+||++|+++|++.+. .+|+++++|++|.. +++. +...+|+. ..||.||+| +|.+.+..++.
T Consensus 216 ~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~--~~~~--v~~~~G~~-~~ad~vI~t---~P~~~l~~~l~----- 282 (513)
T 4gde_A 216 PARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNA--NNKT--VTLQDGTT-IGYKKLVST---MAVDFLAEAMN----- 282 (513)
T ss_dssp ESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEET--TTTE--EEETTSCE-EEEEEEEEC---SCHHHHHHHTT-----
T ss_pred cccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEc--cCCE--EEEcCCCE-EECCEEEEC---CCHHHHHHhcC-----
Confidence 346899999999998773 67999999999985 5444 44567865 379999999 99999998874
Q ss_pred CCCcchHHHHHhcCCCCcceEEEEEeccCC
Q 026682 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEP 179 (235)
Q Consensus 150 ~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~ 179 (235)
.+.....+..++|.+..++.++++..
T Consensus 283 ----~~~~~~~~~~l~y~~~~~v~l~~~~~ 308 (513)
T 4gde_A 283 ----DQELVGLTKQLFYSSTHVIGVGVRGS 308 (513)
T ss_dssp ----CHHHHHHHTTCCEEEEEEEEEEEESS
T ss_pred ----chhhHhhhhcccCCceEEEEEEEecc
Confidence 24556778899999999999998775
No 25
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.58 E-value=5.4e-05 Score=72.48 Aligned_cols=108 Identities=10% Similarity=0.071 Sum_probs=77.3
Q ss_pred ceEEeCCCchHHHHHHhcCC--CCeeEcCeeEE--EEEeecCCCC-------eEEE-eCCCc-ccccccEEEecCCCCCc
Q 026682 70 KKYVGVPGMNSICKALCHQP--GVESKFGVGVG--RFEWLEDKNL-------WSVS-GLDGQ-SLGQFNGVVASDKNVVS 136 (235)
Q Consensus 70 ~~yvg~~GM~~l~~~La~~l--~~~i~~~~~V~--~i~~~~~~~~-------w~l~-~~~G~-~~~~~d~VVlA~~~~pa 136 (235)
..|..++||..|+++|++.+ +..|+++++|+ +|.+ .+++ ++|+ ..+|+ ....||.||+| +|.
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~--~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvT---vP~ 412 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVAN--ACHSGTASARAQLLSYDSHNAVHSEAYDFVILA---VPH 412 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEE--EEECSSSSCCEEEEEEETTCCEEEEEESEEEEC---SCH
T ss_pred ceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEE--CCCCCccccceEEEEEecCCceEEEEcCEEEEC---CCH
Confidence 45677899999999999987 56799999999 9986 3333 7774 45564 12469999999 888
Q ss_pred cchhccc---CCC--CC---C--------------CCC-c-c-------hHHHHHhcCCCCcceEEEEEec-----cCCC
Q 026682 137 PRFRDVT---GRP--PP---L--------------DLT-F-A-------PDLAVKLEEIPVNPCFALMLAF-----SEPL 180 (235)
Q Consensus 137 p~~~~ll---~~p--~~---~--------------~~~-~-~-------~~l~~~l~~v~~~p~~~v~~~~-----~~~~ 180 (235)
+.+..++ ++. .. . ..+ + . +....+++++.|.+...+.+.| ++|.
T Consensus 413 ~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~f 492 (721)
T 3ayj_A 413 DQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPW 492 (721)
T ss_dssp HHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTT
T ss_pred HHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCc
Confidence 7764311 110 00 0 002 2 2 4667889999999999999999 8887
Q ss_pred CC
Q 026682 181 SS 182 (235)
Q Consensus 181 ~~ 182 (235)
|.
T Consensus 493 W~ 494 (721)
T 3ayj_A 493 VP 494 (721)
T ss_dssp SC
T ss_pred cc
Confidence 74
No 26
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.92 E-value=0.1 Score=41.02 Aligned_cols=148 Identities=27% Similarity=0.502 Sum_probs=90.1
Q ss_pred eecccCCCceecCChHHHHHHHHHHhCCccccccccceeEeccCcceeecccCCCCceEEeCCCchHHHHHHhcCCCCee
Q 026682 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVES 93 (235)
Q Consensus 14 ~~fDhGAqyft~~~~~f~~~v~~~~~~g~v~~W~~~~~~~~~~~g~~~~~~~~~~~~~yvg~~GM~~l~~~La~~l~~~i 93 (235)
..+|||+|||+++++.|...+..+...+....+...+........ .........+....++........... .+
T Consensus 49 ~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 122 (336)
T 3kkj_A 49 GALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRL----SPSPDEQVRWVGKPGMSAITRAMRGDM--PV 122 (336)
T ss_dssp EEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSSBC----CCCCTTSCEEEESSSTHHHHHHHHTTC--CE
T ss_pred ceeecCccccccCcHHHHHHHHHHHhccccccccccccccccccc----cccccccceeecccccccchhcccccc--ee
Confidence 479999999999999999999999887887777665444321110 112334677888888988888777644 35
Q ss_pred EcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCCCcchHHHHHhcCCCCcceEEEE
Q 026682 94 KFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173 (235)
Q Consensus 94 ~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~~~~~~l~~~l~~v~~~p~~~v~ 173 (235)
....+...... ..+.+.+....+........++.+ .........+ ..............+......+
T Consensus 123 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 189 (336)
T 3kkj_A 123 SFSCRITEVFR--GEEHWNLLDAEGQNHGPFSHVIIA---TPAPQASTLL--------AAAPKLASVVAGVKMDPTWAVA 189 (336)
T ss_dssp ECSCCEEEEEE--CSSCEEEEETTSCEEEEESCEEEC---SCHHHHGGGG--------TTCHHHHHHHTTCCEEEEEEEE
T ss_pred ecceeeccccc--ccccccccccccccccccccceec---cccchhhhhh--------cccccccccccccccccchhhh
Confidence 66666666654 556677766655432233344444 2222222222 1122334445555566666777
Q ss_pred EeccCCC
Q 026682 174 LAFSEPL 180 (235)
Q Consensus 174 ~~~~~~~ 180 (235)
..+..+.
T Consensus 190 ~~~~~~~ 196 (336)
T 3kkj_A 190 LAFETPL 196 (336)
T ss_dssp EEESSCC
T ss_pred hcccccc
Confidence 6666653
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=96.56 E-value=0.00089 Score=59.40 Aligned_cols=75 Identities=8% Similarity=-0.052 Sum_probs=58.6
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCCC
Q 026682 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (235)
Q Consensus 73 vg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~~ 152 (235)
...+||++|+++|++.++.+|+++++|++|.+ . | + ....||.||+| +|++++..+
T Consensus 199 ~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~--~---v-----~--~~~~aD~VI~t---~p~~~l~~~---------- 253 (399)
T 1v0j_A 199 LPTDGYTAWLQNMAADHRIEVRLNTDWFDVRG--Q---L-----R--PGSPAAPVVYT---GPLDRYFDY---------- 253 (399)
T ss_dssp CBTTHHHHHHHHHTCSTTEEEECSCCHHHHHH--H---H-----T--TTSTTCCEEEC---SCHHHHTTT----------
T ss_pred cccccHHHHHHHHHhcCCeEEEECCchhhhhh--h---h-----h--hcccCCEEEEC---CcHHHHHhh----------
Confidence 55799999999999988888999999999974 2 3 1 21158999999 887764433
Q ss_pred cchHHHHHhcCCCCcceEEEEEeccCC
Q 026682 153 FAPDLAVKLEEIPVNPCFALMLAFSEP 179 (235)
Q Consensus 153 ~~~~l~~~l~~v~~~p~~~v~~~~~~~ 179 (235)
.+.+++|.++..+.+.++.+
T Consensus 254 -------~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 254 -------AEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp -------TTCCCCEEEEEEEEEEESSS
T ss_pred -------hhCCCCcceEEEEEEEEccc
Confidence 35688999988888888775
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.45 E-value=0.0013 Score=58.07 Aligned_cols=67 Identities=7% Similarity=0.035 Sum_probs=55.8
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcCeeEE-EEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCC
Q 026682 73 VGVPGMNSICKALCHQPGVESKFGVGVG-RFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDL 151 (235)
Q Consensus 73 vg~~GM~~l~~~La~~l~~~i~~~~~V~-~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~ 151 (235)
...+||++|+++|++..+.+|+++++|. +|.+ .||.||+| +|++++..+
T Consensus 193 ~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~------------------~~d~VI~a---~p~~~~~~~--------- 242 (384)
T 2bi7_A 193 MPKCGYTQMIKSILNHENIKVDLQREFIVEERT------------------HYDHVFYS---GPLDAFYGY--------- 242 (384)
T ss_dssp EETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG------------------GSSEEEEC---SCHHHHTTT---------
T ss_pred EECcCHHHHHHHHHhcCCCEEEECCeeehhhhc------------------cCCEEEEc---CCHHHHHHh---------
Confidence 6689999999999997778899999998 7752 28999999 888765543
Q ss_pred CcchHHHHHhcCCCCcceEEEEEecc
Q 026682 152 TFAPDLAVKLEEIPVNPCFALMLAFS 177 (235)
Q Consensus 152 ~~~~~l~~~l~~v~~~p~~~v~~~~~ 177 (235)
.+.+++|.++-.+.+.++
T Consensus 243 --------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 243 --------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp --------TTCCCCEEEEEEEEEEEE
T ss_pred --------hcCCCCcceEEEEEEEeC
Confidence 256789999999999987
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=96.29 E-value=0.0016 Score=57.19 Aligned_cols=71 Identities=11% Similarity=0.131 Sum_probs=56.8
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCCC
Q 026682 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (235)
Q Consensus 73 vg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~~ 152 (235)
...+||++|+++|++ +.+|+++++|.+|.+ .| ...||+||+| +|++++..+
T Consensus 189 ~p~gG~~~l~~~l~~--g~~i~l~~~V~~i~~-----~v---------~~~~D~VV~a---~p~~~~~~~---------- 239 (367)
T 1i8t_A 189 IPVGGYTKLIEKMLE--GVDVKLGIDFLKDKD-----SL---------ASKAHRIIYT---GPIDQYFDY---------- 239 (367)
T ss_dssp CBTTCHHHHHHHHHT--TSEEECSCCGGGSHH-----HH---------HTTEEEEEEC---SCHHHHTTT----------
T ss_pred ccCCCHHHHHHHHhc--CCEEEeCCceeeech-----hh---------hccCCEEEEe---ccHHHHHHH----------
Confidence 557999999999998 478999999998863 13 1259999999 877664322
Q ss_pred cchHHHHHhcCCCCcceEEEEEeccCC
Q 026682 153 FAPDLAVKLEEIPVNPCFALMLAFSEP 179 (235)
Q Consensus 153 ~~~~l~~~l~~v~~~p~~~v~~~~~~~ 179 (235)
.+.+++|.++..+.++++.+
T Consensus 240 -------~l~~l~y~s~~~v~~~~d~~ 259 (367)
T 1i8t_A 240 -------RFGALEYRSLKFETERHEFP 259 (367)
T ss_dssp -------TTCCCCEEEEEEEEEEESSS
T ss_pred -------hhCCCCCceEEEEEEEeccc
Confidence 36789999999999999886
No 30
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=94.77 E-value=0.021 Score=51.04 Aligned_cols=57 Identities=7% Similarity=0.057 Sum_probs=43.9
Q ss_pred eEEeCCCchHHHHHHhcC---CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 71 KYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+...+||..|+++|++. .|.+|+++++|++|.. .++++.....+|+.+ .+|.||+|
T Consensus 226 ~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~--~~~~v~~v~~~g~~~-~ad~VV~a 285 (433)
T 1d5t_A 226 YLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIM--ENGKVVGVKSEGEVA-RCKQLICD 285 (433)
T ss_dssp EEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEE--ETTEEEEEEETTEEE-ECSEEEEC
T ss_pred EEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEE--eCCEEEEEEECCeEE-ECCEEEEC
Confidence 457789999999999864 3678999999999986 556665333466543 68999999
No 31
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.74 E-value=0.14 Score=43.75 Aligned_cols=47 Identities=9% Similarity=0.029 Sum_probs=36.2
Q ss_pred HHHHHHhc---CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++.|++ ..|++|+++++|++|+. ++++|.|.+++|. ..+|.||+|
T Consensus 155 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~--~~~~~~V~t~~g~--i~a~~VV~A 204 (381)
T 3nyc_A 155 ALHQGYLRGIRRNQGQVLCNHEALEIRR--VDGAWEVRCDAGS--YRAAVLVNA 204 (381)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCCCEEEE--ETTEEEEECSSEE--EEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEE--eCCeEEEEeCCCE--EEcCEEEEC
Confidence 44444443 24789999999999987 6677999988873 379999999
No 32
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.69 E-value=0.055 Score=47.75 Aligned_cols=45 Identities=11% Similarity=0.003 Sum_probs=36.0
Q ss_pred CCceEEeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEE
Q 026682 68 MNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVS 114 (235)
Q Consensus 68 ~~~~yvg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~ 114 (235)
....|...+||+.|+++|++.++.+|+++++|++|.. .+++..+.
T Consensus 309 ~~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~--~~~gv~v~ 353 (376)
T 2e1m_A 309 RATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEY--YDPGRDGH 353 (376)
T ss_dssp TCCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEE--CCCC----
T ss_pred CCceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEE--CCCceEEE
Confidence 3567888999999999999998878999999999997 66666554
No 33
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=93.45 E-value=0.13 Score=46.72 Aligned_cols=60 Identities=15% Similarity=0.210 Sum_probs=43.7
Q ss_pred ceEEeCCCchHHHHHHhcC---CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 70 KKYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 70 ~~yvg~~GM~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+.+.-.+||..|+++|++. .|.+|+++++|++|....++..+.|.+.+|+.+ .+|.||++
T Consensus 247 ~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i-~Ad~VI~a 309 (475)
T 3p1w_A 247 PFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIA-YCDKVICD 309 (475)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEE-EEEEEEEC
T ss_pred ceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEE-ECCEEEEC
Confidence 4445688999999988663 478899999999998511233367888888643 68999999
No 34
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.41 E-value=0.053 Score=48.60 Aligned_cols=54 Identities=9% Similarity=0.138 Sum_probs=42.1
Q ss_pred EeCCCchHHHHHHhcCC---CCeeEcCeeEEEEEeecC--CCCe-EEEeCCCcccccccEEEec
Q 026682 73 VGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLED--KNLW-SVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 73 vg~~GM~~l~~~La~~l---~~~i~~~~~V~~i~~~~~--~~~w-~l~~~~G~~~~~~d~VVlA 130 (235)
...+||..|+++|++.+ |.+|+++++|++|.. . ++++ .+.+ +|+.+ .+|.||++
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~--~~~~~~~~~V~~-~g~~~-~ad~VV~a 295 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLY--KKDTGKFEGVKT-KLGTF-KAPLVIAD 295 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE--ETTTTEEEEEEE-TTEEE-ECSCEEEC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEE--ECCCCeEEEEEE-CCeEE-ECCEEEEC
Confidence 66899999999998654 789999999999986 4 4554 4555 46543 68999999
No 35
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.37 E-value=0.15 Score=48.33 Aligned_cols=49 Identities=16% Similarity=0.285 Sum_probs=37.2
Q ss_pred hHHHHHHhc---CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCc-ccccccEEEec
Q 026682 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVlA 130 (235)
..+++.|.+ ..|++|+++++|++|.. ++++|.|.+++|+ . ..+|.||+|
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~--~~~~v~V~t~~G~~~-i~Ad~VVlA 464 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKR--IDSQWQLTFGQSQAA-KHHATVILA 464 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE--CSSSEEEEEC-CCCC-EEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEE--eCCeEEEEeCCCcEE-EECCEEEEC
Confidence 345555543 25789999999999997 7778999988875 3 368999999
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.99 E-value=0.14 Score=48.24 Aligned_cols=49 Identities=14% Similarity=0.278 Sum_probs=37.8
Q ss_pred hHHHHHHhc---CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..+++.|.+ ..|++|+++++|++|.. ++++|.|.+.+|+. ..+|.||+|
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~--~~~~v~V~t~~G~~-i~Ad~VVlA 468 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSR--KDDCWLLNFAGDQQ-ATHSVVVLA 468 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE--ETTEEEEEETTSCE-EEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEE--eCCeEEEEECCCCE-EECCEEEEC
Confidence 345554443 35789999999999997 67789999888755 378999999
No 37
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.46 E-value=0.26 Score=41.51 Aligned_cols=50 Identities=8% Similarity=-0.073 Sum_probs=38.4
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeE-EEeCCCcccccccEEEecC
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVlA~ 131 (235)
+....+.+++..+++++++++|.+|.. .+++|. |.+++| . ..||.||+|.
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g-~-~~~d~vV~At 128 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSH--FGERLRVVARDGR-Q-WLARAVISAT 128 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEE--ETTEEEEEETTSC-E-EEEEEEEECC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEE--CCCcEEEEEeCCC-E-EEeCEEEECC
Confidence 334444455556788999999999997 677899 998887 3 3799999993
No 38
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.40 E-value=0.3 Score=41.75 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=35.5
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.|.+.+.+ .+++++.+++|++|+. ++++|.+.+.+|. ..+|.||+|
T Consensus 154 ~l~~~~~~-~G~~i~~~~~V~~i~~--~~~~~~v~~~~g~--~~a~~vV~a 199 (372)
T 2uzz_A 154 TWIQLAKE-AGCAQLFNCPVTAIRH--DDDGVTIETADGE--YQAKKAIVC 199 (372)
T ss_dssp HHHHHHHH-TTCEEECSCCEEEEEE--CSSSEEEEESSCE--EEEEEEEEC
T ss_pred HHHHHHHH-CCCEEEcCCEEEEEEE--cCCEEEEEECCCe--EEcCEEEEc
Confidence 34444333 4788999999999987 6678999888875 368999999
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=91.31 E-value=0.34 Score=41.00 Aligned_cols=49 Identities=6% Similarity=-0.090 Sum_probs=35.8
Q ss_pred HHHHHHhc---CCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCc-ccccccEEEec
Q 026682 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~-~~~~~d~VVlA 130 (235)
.+++.|++ ..|++|+++++|++|+. ++++ |.+.+++|+ ....+|.||+|
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 151 ALMLAYQGDAESDGAQLVFHTPLIAGRV--RPEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEE--CTTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEE--cCCceEEEEECCCceeEEEeCEEEEC
Confidence 34444433 25789999999999987 5555 999888873 22368999999
No 40
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.23 E-value=0.23 Score=43.75 Aligned_cols=39 Identities=18% Similarity=0.115 Sum_probs=33.0
Q ss_pred CCCeeEcCe---eEEEEEeecCCCCeE-EEeCCCcccccccEEEec
Q 026682 89 PGVESKFGV---GVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~---~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVlA 130 (235)
.|++|++++ +|++|.. ++++|. |.+.+|+. ..+|.||+|
T Consensus 174 ~Gv~i~~~t~~~~V~~i~~--~~~~v~gV~t~~G~~-i~Ad~VV~A 216 (438)
T 3dje_A 174 MGVKFVTGTPQGRVVTLIF--ENNDVKGAVTADGKI-WRAERTFLC 216 (438)
T ss_dssp TTCEEEESTTTTCEEEEEE--ETTEEEEEEETTTEE-EECSEEEEC
T ss_pred cCCEEEeCCcCceEEEEEe--cCCeEEEEEECCCCE-EECCEEEEC
Confidence 578999999 9999987 677888 88888854 368999999
No 41
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=91.15 E-value=0.4 Score=45.27 Aligned_cols=58 Identities=16% Similarity=0.077 Sum_probs=43.6
Q ss_pred ceEEeCCCchHHHHHHhc---CCCCeeEcCeeEEEEEeecCC--CCeE-EEeCCCcccccccEEEec
Q 026682 70 KKYVGVPGMNSICKALCH---QPGVESKFGVGVGRFEWLEDK--NLWS-VSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 70 ~~yvg~~GM~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~--~~w~-l~~~~G~~~~~~d~VVlA 130 (235)
..+...+||++|+++|++ ..|.+|+++++|.+|.. ++ ++.. +...+|+.+ .+|.||+.
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~--~~~~g~v~gV~~~~Ge~i-~A~~VVs~ 432 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVV--DKESRKCKAVIDQFGQRI-ISKHFIIE 432 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEE--ETTTCCEEEEEETTSCEE-ECSEEEEE
T ss_pred ceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEE--eCCCCeEEEEEeCCCCEE-EcCEEEEC
Confidence 556778999999998854 45889999999999986 33 4443 444668654 68999886
No 42
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=91.09 E-value=0.13 Score=38.54 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=40.2
Q ss_pred cccEEEecCCCCCccchhcccCCCCCCCCCcchHHHHHhcCCCCcceEEEEEeccCCCCC
Q 026682 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (235)
Q Consensus 123 ~~d~VVlA~~~~pap~~~~ll~~p~~~~~~~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~ 182 (235)
.+|+||+| +|...+..+.=.| ++.+...++++.+.|.+...+++.|++++|.
T Consensus 7 ~Ad~VIvT---vP~~vL~~I~F~P-----~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~ 58 (130)
T 2e1m_B 7 TGDLAIVT---IPFSSLRFVKVTP-----PFSYKKRRAVIETHYDQATKVLLEFSRRWWE 58 (130)
T ss_dssp EESEEEEC---SCHHHHTTSEEES-----CCCHHHHHHHHHCCEECEEEEEEEESSCGGG
T ss_pred EcCEEEEc---CCHHHHhcCcCCC-----CCCHHHHHHHHhCCCcceeEEEEEECCCCCC
Confidence 68999999 8877655432112 4555677889999999999999999999874
No 43
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.08 E-value=0.28 Score=45.10 Aligned_cols=60 Identities=25% Similarity=0.407 Sum_probs=43.9
Q ss_pred eEEeCCCchHHHHHHhcCCCC--eeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 71 KYVGVPGMNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 71 ~yvg~~GM~~l~~~La~~l~~--~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.|...+-+....+..++..++ +++++++|.++++..+++.|.|.+++|+.+ .||.||+|.
T Consensus 82 ~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i-~ad~lV~At 143 (540)
T 3gwf_A 82 TYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVY-RAKYVVNAV 143 (540)
T ss_dssp SEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEE-EEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEE-EeCEEEECC
Confidence 344444555556666666665 799999999999733345899999988743 799999994
No 44
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=90.55 E-value=0.72 Score=39.45 Aligned_cols=47 Identities=26% Similarity=0.172 Sum_probs=35.5
Q ss_pred HHHHHHhc---CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+.+.|.+ ..+++++++++|.+|.. ++++|.|.+++| . ..+|.||+|
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~--~~~~~~v~~~~g-~-~~a~~vV~A 214 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVER--DGEALFIKTPSG-D-VWANHVVVA 214 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEEC--SSSSEEEEETTE-E-EEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEE--ECCEEEEEcCCc-e-EEcCEEEEC
Confidence 34444443 24788999999999986 677898888777 3 378999999
No 45
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=90.38 E-value=0.31 Score=43.17 Aligned_cols=91 Identities=7% Similarity=0.103 Sum_probs=61.6
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCccchhcccCCCCCCCCC
Q 026682 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (235)
Q Consensus 73 vg~~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap~~~~ll~~p~~~~~~ 152 (235)
.-.+|+++|.+.|++..+.+|+++++|..+. .. ..+|.||.| .|.+...
T Consensus 217 ~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~~---------------~~-~~~d~vI~T---~P~d~~~------------ 265 (397)
T 3hdq_A 217 MPLHGYTRMFQNMLSSPNIKVMLNTDYREIA---------------DF-IPFQHMIYT---GPVDAFF------------ 265 (397)
T ss_dssp EETTCHHHHHHHHTCSTTEEEEESCCGGGTT---------------TT-SCEEEEEEC---SCHHHHT------------
T ss_pred ccCCCHHHHHHHHHhccCCEEEECCeEEecc---------------cc-ccCCEEEEc---CCHHHHH------------
Confidence 4589999999999998888999999987431 12 258999999 5554321
Q ss_pred cchHHHHHhcCCCCcceEEEEEeccCCCCCCCccceEecCCCcEEEEE
Q 026682 153 FAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAH 200 (235)
Q Consensus 153 ~~~~l~~~l~~v~~~p~~~v~~~~~~~~~~~~~~g~~~~~~~~l~wi~ 200 (235)
...+..++|.+...+.++++.+.. .+..=+.+++.++..-|.
T Consensus 266 -----~~~~g~L~yrsl~~~~~~~~~~~~-~~~~~vn~~d~~p~tRi~ 307 (397)
T 3hdq_A 266 -----DFCYGKLPYRSLEFRHETHDTEQL-LPTGTVNYPNDYAYTRVS 307 (397)
T ss_dssp -----TTTTCCCCEEEEEEEEEEESSSCS-CSSSEEECSSSSSCSEEE
T ss_pred -----HHhcCCCCCceEEEEEEEeccccC-CCCeEEEeCCCCcceEEE
Confidence 114678899999999999986521 122222244433555554
No 46
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=90.31 E-value=0.58 Score=40.21 Aligned_cols=51 Identities=14% Similarity=0.132 Sum_probs=41.1
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..|-+.|.+.++.+|+++++|++++. .+++++++++++|+. ..+|.||-||
T Consensus 112 ~~L~~~L~~~~~~~v~~~~~v~~~~~-~~~~~v~v~~~dG~~-~~adlvVgAD 162 (412)
T 4hb9_A 112 TELKEILNKGLANTIQWNKTFVRYEH-IENGGIKIFFADGSH-ENVDVLVGAD 162 (412)
T ss_dssp HHHHHHHHTTCTTTEECSCCEEEEEE-CTTSCEEEEETTSCE-EEESEEEECC
T ss_pred HHHHHHHHhhccceEEEEEEEEeeeE-cCCCeEEEEECCCCE-EEeeEEEECC
Confidence 35777788877778999999999986 245579999999975 4799999985
No 47
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=90.30 E-value=0.91 Score=39.39 Aligned_cols=49 Identities=16% Similarity=0.058 Sum_probs=38.8
Q ss_pred hHHHHHHhcCC-CCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 79 NSICKALCHQP-GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l-~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..|.+.|.+.+ +++|+++++|++|+. ++++|.++..+|+. ..+|.||.|
T Consensus 99 ~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~-~~ad~vV~A 148 (397)
T 2vou_A 99 DSIYGGLYELFGPERYHTSKCLVGLSQ--DSETVQMRFSDGTK-AEANWVIGA 148 (397)
T ss_dssp HHHHHHHHHHHCSTTEETTCCEEEEEE--CSSCEEEEETTSCE-EEESEEEEC
T ss_pred HHHHHHHHHhCCCcEEEcCCEEEEEEe--cCCEEEEEECCCCE-EECCEEEEC
Confidence 45556555543 578999999999987 77889999988864 479999999
No 48
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.12 E-value=0.42 Score=40.67 Aligned_cols=45 Identities=4% Similarity=0.020 Sum_probs=35.5
Q ss_pred HHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+.+++..+++++++++|.+|.+ .+++|.|.+.+|. ..||.||+|.
T Consensus 95 ~~~~~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~g~--~~~d~vVlAt 139 (369)
T 3d1c_A 95 QVVANHYELNIFENTVVTNISA--DDAYYTIATTTET--YHADYIFVAT 139 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE--CSSSEEEEESSCC--EEEEEEEECC
T ss_pred HHHHHHcCCeEEeCCEEEEEEE--CCCeEEEEeCCCE--EEeCEEEECC
Confidence 3444556788999999999987 6678999887774 3699999993
No 49
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=89.98 E-value=0.55 Score=40.84 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=39.4
Q ss_pred hHHHHHHhcCCC-CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 79 NSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 79 ~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..|.+.|.+.+. .+|+++++|++|+. ++++|.|+..+|+. ..+|.||.|+
T Consensus 128 ~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~-~~ad~vV~Ad 178 (398)
T 2xdo_A 128 NDLRAILLNSLENDTVIWDRKLVMLEP--GKKKWTLTFENKPS-ETADLVILAN 178 (398)
T ss_dssp HHHHHHHHHTSCTTSEEESCCEEEEEE--CSSSEEEEETTSCC-EEESEEEECS
T ss_pred HHHHHHHHhhcCCCEEEECCEEEEEEE--CCCEEEEEECCCcE-EecCEEEECC
Confidence 456666666552 57999999999987 67789999988864 3799999994
No 50
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=89.58 E-value=0.38 Score=41.64 Aligned_cols=47 Identities=19% Similarity=0.094 Sum_probs=35.1
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..|.+.+.+ .+++|+++++|++|+. ++++|.+.+++|. ..+|.||+|
T Consensus 157 ~~l~~~a~~-~Gv~i~~~~~V~~i~~--~~~~v~v~t~~g~--i~a~~VV~A 203 (397)
T 2oln_A 157 AALFTLAQA-AGATLRAGETVTELVP--DADGVSVTTDRGT--YRAGKVVLA 203 (397)
T ss_dssp HHHHHHHHH-TTCEEEESCCEEEEEE--ETTEEEEEESSCE--EEEEEEEEC
T ss_pred HHHHHHHHH-cCCEEECCCEEEEEEE--cCCeEEEEECCCE--EEcCEEEEc
Confidence 344444333 5789999999999986 5667998877664 368999999
No 51
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=89.47 E-value=0.45 Score=40.79 Aligned_cols=47 Identities=13% Similarity=0.150 Sum_probs=35.5
Q ss_pred HHHHHHhc---CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++.|.+ ..+++++++++|++|+. ++++|.+.+++|. ..+|.||+|
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~--~~~~~~v~~~~g~--~~a~~vV~A 200 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDI--SPDSVKIETANGS--YTADKLIVS 200 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEE--CSSCEEEEETTEE--EEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEe--cCCeEEEEeCCCE--EEeCEEEEe
Confidence 44444443 24789999999999987 6678999887663 368999999
No 52
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.23 E-value=0.41 Score=42.50 Aligned_cols=47 Identities=19% Similarity=0.179 Sum_probs=34.2
Q ss_pred HHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC---Cc--ccccccEEEecC
Q 026682 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ--SLGQFNGVVASD 131 (235)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---G~--~~~~~d~VVlA~ 131 (235)
+..++..+..++++++|.+|+. .+++|.|+..+ |+ ....||.||+|.
T Consensus 122 ~~~~~~~~~~i~~~t~V~~v~~--~~~~~~V~~~~~~~G~~~~~~~~d~VVvAt 173 (447)
T 2gv8_A 122 RIYAQPLLPFIKLATDVLDIEK--KDGSWVVTYKGTKAGSPISKDIFDAVSICN 173 (447)
T ss_dssp HHHHGGGGGGEECSEEEEEEEE--ETTEEEEEEEESSTTCCEEEEEESEEEECC
T ss_pred HHHHHHhhCeEEeCCEEEEEEe--CCCeEEEEEeecCCCCeeEEEEeCEEEECC
Confidence 3344444557999999999987 66789998765 64 124799999994
No 53
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=88.85 E-value=0.51 Score=43.44 Aligned_cols=54 Identities=13% Similarity=0.158 Sum_probs=40.0
Q ss_pred CchHHHHHHhcCCCC--eeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 77 GMNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 77 GM~~l~~~La~~l~~--~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
-+....+.+++..++ +++++++|+++++..+.+.|+|.+++|+.+ .||.||+|.
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i-~ad~lV~At 155 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEV-SARFLVVAA 155 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEE-EeCEEEECc
Confidence 344445555665665 799999999998733445899999998753 799999993
No 54
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=88.76 E-value=0.51 Score=41.88 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=42.5
Q ss_pred CCchHHHHHHhcC---CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCCCCCcc
Q 026682 76 PGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSP 137 (235)
Q Consensus 76 ~GM~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~~~pap 137 (235)
.....+.+.|.+. .+++|+++++|.+|.. ++++|.|.+.+| . ..+|.||+|+-..+.|
T Consensus 129 ~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~--~~~~~~V~~~~g-~-i~ad~VIlAtG~~S~p 189 (417)
T 3v76_A 129 HSAKDIIRMLMAEMKEAGVQLRLETSIGEVER--TASGFRVTTSAG-T-VDAASLVVASGGKSIP 189 (417)
T ss_dssp SCHHHHHHHHHHHHHHHTCEEECSCCEEEEEE--ETTEEEEEETTE-E-EEESEEEECCCCSSCG
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCEEEEEEE--eCCEEEEEECCc-E-EEeeEEEECCCCccCC
Confidence 3444566655543 3689999999999987 667899998887 3 3799999995554433
No 55
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=88.70 E-value=0.59 Score=40.04 Aligned_cols=38 Identities=21% Similarity=0.014 Sum_probs=31.9
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeE-EEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVlA 130 (235)
.+++++.+++|++|.. ++++|. |.+.+|. ..+|.||+|
T Consensus 162 ~Gv~i~~~~~v~~i~~--~~~~v~gv~~~~g~--i~a~~VV~A 200 (382)
T 1y56_B 162 YGAKLLEYTEVKGFLI--ENNEIKGVKTNKGI--IKTGIVVNA 200 (382)
T ss_dssp TTCEEECSCCEEEEEE--SSSBEEEEEETTEE--EECSEEEEC
T ss_pred CCCEEECCceEEEEEE--ECCEEEEEEECCcE--EECCEEEEC
Confidence 5789999999999987 677888 8887773 368999999
No 56
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=88.63 E-value=0.62 Score=40.33 Aligned_cols=39 Identities=26% Similarity=0.185 Sum_probs=33.0
Q ss_pred CCeeEcCeeEEEEEeecCCCCe--EEEeCCCcccccccEEEecC
Q 026682 90 GVESKFGVGVGRFEWLEDKNLW--SVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~w--~l~~~~G~~~~~~d~VVlA~ 131 (235)
+++|+++++|++|+. ++++| .+.+++|+. ..+|.||.|+
T Consensus 122 gv~i~~~~~v~~i~~--~~~~v~g~v~~~~g~~-~~ad~vV~Ad 162 (399)
T 2x3n_A 122 TVEMLFETRIEAVQR--DERHAIDQVRLNDGRV-LRPRVVVGAD 162 (399)
T ss_dssp TEEEECSCCEEEEEE--CTTSCEEEEEETTSCE-EEEEEEEECC
T ss_pred CcEEEcCCEEEEEEE--cCCceEEEEEECCCCE-EECCEEEECC
Confidence 678999999999987 77789 898888864 3789999994
No 57
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=88.58 E-value=0.25 Score=45.50 Aligned_cols=56 Identities=16% Similarity=0.279 Sum_probs=41.0
Q ss_pred CCCchHHHHHHhcCCCC--eeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 75 VPGMNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 75 ~~GM~~l~~~La~~l~~--~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+-+....+.+++..++ .++++++|.++++..+++.|.|.+++|+.+ .||.||+|.
T Consensus 86 ~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~lV~At 143 (545)
T 3uox_A 86 QPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVV-TCRFLISAT 143 (545)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEE-EEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEE-EeCEEEECc
Confidence 33444555556665554 789999999998744456899999988653 799999993
No 58
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=87.68 E-value=0.61 Score=35.56 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=31.8
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..+++++++ +|.+++. ++++|.+.+++| . ..+|.||+|
T Consensus 68 ~~gv~v~~~-~v~~i~~--~~~~~~v~~~~g-~-i~ad~vI~A 105 (180)
T 2ywl_A 68 RYGAEVRPG-VVKGVRD--MGGVFEVETEEG-V-EKAERLLLC 105 (180)
T ss_dssp HTTCEEEEC-CCCEEEE--CSSSEEEECSSC-E-EEEEEEEEC
T ss_pred HcCCEEEeC-EEEEEEE--cCCEEEEEECCC-E-EEECEEEEC
Confidence 357899999 9999987 667899998888 3 379999999
No 59
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=86.72 E-value=0.8 Score=40.68 Aligned_cols=54 Identities=22% Similarity=0.191 Sum_probs=38.6
Q ss_pred hHHHHHHhc---CCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEecCCCCC
Q 026682 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVV 135 (235)
Q Consensus 79 ~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA~~~~p 135 (235)
..+.+.|.+ ..+++|+++++|++|.. ++++ |.|...+|+. ..+|.||+|+-+.+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~--~~~~v~~V~~~~G~~-i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEY--ENGQTKAVILQTGEV-LETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTCCE-EECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEe--cCCcEEEEEECCCCE-EECCEEEECCCCCc
Confidence 444444443 25789999999999986 4555 8898888863 36899999954444
No 60
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.32 E-value=1.1 Score=37.22 Aligned_cols=41 Identities=7% Similarity=0.007 Sum_probs=33.4
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCC-CeEEEeCCCcccccccEEEec
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~G~~~~~~d~VVlA 130 (235)
++..+.+++++++|.+|.+ .++ .|.+.+++|+ ..||.||+|
T Consensus 77 ~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g~--~~~d~vVlA 118 (332)
T 3lzw_A 77 MAKFDQTICLEQAVESVEK--QADGVFKLVTNEET--HYSKTVIIT 118 (332)
T ss_dssp HTTSCCEEECSCCEEEEEE--CTTSCEEEEESSEE--EEEEEEEEC
T ss_pred HHHhCCcEEccCEEEEEEE--CCCCcEEEEECCCE--EEeCEEEEC
Confidence 3345788999999999987 444 8999988886 379999999
No 61
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=85.61 E-value=1.2 Score=40.56 Aligned_cols=54 Identities=13% Similarity=0.178 Sum_probs=38.1
Q ss_pred chHHHHHHhcCCC--CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecCC
Q 026682 78 MNSICKALCHQPG--VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDK 132 (235)
Q Consensus 78 M~~l~~~La~~l~--~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~~ 132 (235)
+....+.+++..+ .+++++++|.++++..+++.|+|.+++|+.+ .||.||+|.-
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~vV~AtG 151 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRI-RARYLIMASG 151 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEECCC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEE-EeCEEEECcC
Confidence 3334444455444 5799999999998732345799999888643 6999999943
No 62
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=84.96 E-value=1.4 Score=38.65 Aligned_cols=57 Identities=16% Similarity=0.155 Sum_probs=40.6
Q ss_pred CchHHHHHHhcC---CCCeeEcCeeEEEEEeecC----CCCeEEEeCCCcccccccEEEecCCCCCcc
Q 026682 77 GMNSICKALCHQ---PGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVASDKNVVSP 137 (235)
Q Consensus 77 GM~~l~~~La~~---l~~~i~~~~~V~~i~~~~~----~~~w~l~~~~G~~~~~~d~VVlA~~~~pap 137 (235)
....+.+.|.+. .+++++++++|++|.. + +++|.+.+++| . ..+|.||+|.-..+.|
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~--~~~g~~~~~~v~~~~g-~-i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVER--IQNDEKVRFVLQVNST-Q-WQCKNLIVATGGLSMP 170 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEE--CCSCSSCCEEEEETTE-E-EEESEEEECCCCSSCG
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEc--ccCcCCCeEEEEECCC-E-EECCEEEECCCCccCC
Confidence 344555555443 4689999999999986 5 56799988776 3 3789999995544543
No 63
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=84.70 E-value=1.4 Score=39.75 Aligned_cols=44 Identities=11% Similarity=-0.025 Sum_probs=34.3
Q ss_pred HHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..++..|++++++++|.+|+. +++++.+...+|+. ..+|.||+|
T Consensus 231 ~~l~~~GV~i~~~~~V~~i~~--~~~~v~v~~~~g~~-i~aD~Vv~a 274 (499)
T 1xdi_A 231 ESFAERGVRLFKNARAASVTR--TGAGVLVTMTDGRT-VEGSHALMT 274 (499)
T ss_dssp HHHHHTTCEEETTCCEEEEEE--CSSSEEEEETTSCE-EEESEEEEC
T ss_pred HHHHHCCCEEEeCCEEEEEEE--eCCEEEEEECCCcE-EEcCEEEEC
Confidence 333446889999999999986 66678888777754 378999998
No 64
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=84.54 E-value=1 Score=39.03 Aligned_cols=48 Identities=27% Similarity=0.235 Sum_probs=36.5
Q ss_pred HHHHHhcCCC-CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 81 ICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 81 l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
|.+.|.+.+. .+|+++++|++|+. ++++|.+...+|+. ..+|.||.|+
T Consensus 129 l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~-~~a~~vV~Ad 177 (407)
T 3rp8_A 129 LQREMLDYWGRDSVQFGKRVTRCEE--DADGVTVWFTDGSS-ASGDLLIAAD 177 (407)
T ss_dssp HHHHHHHHHCGGGEEESCCEEEEEE--ETTEEEEEETTSCE-EEESEEEECC
T ss_pred HHHHHHHhCCcCEEEECCEEEEEEe--cCCcEEEEEcCCCE-EeeCEEEECC
Confidence 4444444322 57999999999997 67789999998874 4789999993
No 65
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=84.34 E-value=1.4 Score=38.11 Aligned_cols=43 Identities=16% Similarity=0.061 Sum_probs=34.3
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
++..+++++++++|.+|+. +++++.+...+|+. ..+|.||+|.
T Consensus 197 l~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~g~~-i~~d~vv~a~ 239 (384)
T 2v3a_A 197 LEGLGVRFHLGPVLASLKK--AGEGLEAHLSDGEV-IPCDLVVSAV 239 (384)
T ss_dssp HHTTTCEEEESCCEEEEEE--ETTEEEEEETTSCE-EEESEEEECS
T ss_pred HHHcCCEEEeCCEEEEEEe--cCCEEEEEECCCCE-EECCEEEECc
Confidence 3346789999999999986 56678888888864 3799999993
No 66
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=83.83 E-value=1.4 Score=36.89 Aligned_cols=40 Identities=15% Similarity=0.201 Sum_probs=32.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+.+++++++|..|.. .++.|.+.+++|.. ..||.||+|.
T Consensus 78 ~~~~~~~~~~v~~i~~--~~~~~~v~~~~g~~-~~~~~lv~At 117 (335)
T 2zbw_A 78 FNPVYSLGERAETLER--EGDLFKVTTSQGNA-YTAKAVIIAA 117 (335)
T ss_dssp GCCEEEESCCEEEEEE--ETTEEEEEETTSCE-EEEEEEEECC
T ss_pred cCCEEEeCCEEEEEEE--CCCEEEEEECCCCE-EEeCEEEECC
Confidence 4678899999999987 55589998887754 3699999993
No 67
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=83.64 E-value=1.8 Score=37.12 Aligned_cols=45 Identities=18% Similarity=0.080 Sum_probs=33.2
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEec
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA 130 (235)
|.+.+.+ .+++++++++|++|.. ++++ |.+.+.+|. ..+|.||+|
T Consensus 180 l~~~~~~-~g~~i~~~~~v~~i~~--~~~~~~~v~~~~g~--~~a~~vV~a 225 (405)
T 2gag_B 180 FARKANE-MGVDIIQNCEVTGFIK--DGEKVTGVKTTRGT--IHAGKVALA 225 (405)
T ss_dssp HHHHHHH-TTCEEECSCCEEEEEE--SSSBEEEEEETTCC--EEEEEEEEC
T ss_pred HHHHHHH-CCCEEEcCCeEEEEEE--eCCEEEEEEeCCce--EECCEEEEC
Confidence 3444433 4789999999999986 4444 778887773 368999999
No 68
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=83.51 E-value=1.1 Score=39.64 Aligned_cols=54 Identities=17% Similarity=0.159 Sum_probs=36.6
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecC-CCCe--EEEeCCCc--c-cccccEEEecC
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLED-KNLW--SVSGLDGQ--S-LGQFNGVVASD 131 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~-~~~w--~l~~~~G~--~-~~~~d~VVlA~ 131 (235)
+....+..++.++.+++++++|.+|++..+ ++.| .|.+.+|. . ...||.||+|.
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAt 188 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSP 188 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECC
Confidence 445555667777788999999999987111 4456 66655553 1 24799999994
No 69
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=82.37 E-value=1.5 Score=39.23 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=33.4
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+++++++++|.+|+. +++++.+..++|+.+ .+|.||+|.
T Consensus 245 ~Gv~i~~~~~V~~i~~--~~~~v~v~~~~g~~i-~aD~Vi~A~ 284 (484)
T 3o0h_A 245 KGISIIYEATVSQVQS--TENCYNVVLTNGQTI-CADRVMLAT 284 (484)
T ss_dssp HTCEEESSCCEEEEEE--CSSSEEEEETTSCEE-EESEEEECC
T ss_pred CCCEEEeCCEEEEEEe--eCCEEEEEECCCcEE-EcCEEEEee
Confidence 4788999999999986 677888988888643 699999993
No 70
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=81.94 E-value=1.8 Score=38.58 Aligned_cols=45 Identities=16% Similarity=0.024 Sum_probs=34.9
Q ss_pred HHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+..++..+++++++++|.+|+. .+++..+...+|+. ..+|.||+|
T Consensus 209 ~~~l~~~GV~i~~~~~v~~i~~--~~~~v~v~~~~g~~-i~aD~Vv~a 253 (472)
T 3iwa_A 209 RHDLEKNDVVVHTGEKVVRLEG--ENGKVARVITDKRT-LDADLVILA 253 (472)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE--SSSBEEEEEESSCE-EECSEEEEC
T ss_pred HHHHHhcCCEEEeCCEEEEEEc--cCCeEEEEEeCCCE-EEcCEEEEC
Confidence 3334446789999999999986 56777787778864 379999998
No 71
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=81.56 E-value=2.2 Score=39.38 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=36.0
Q ss_pred hHHHHHHhc---CCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEecC
Q 026682 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 79 ~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..+.+.|.+ ..+++|+++++|++|.. ++++ +.|..++|+. ..+|.||+|+
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~--~~~~v~gV~l~~G~~-i~Ad~VVlA~ 273 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM--EDGQITGVTLSNGEE-IKSRHVVLAV 273 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE--SSSBEEEEEETTSCE-EECSCEEECC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE--eCCEEEEEEECCCCE-EECCEEEECC
Confidence 444444433 25789999999999986 5554 5588888864 3789999993
No 72
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=81.03 E-value=2.2 Score=37.17 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=36.1
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCe-EEEeCCCcccccccEEEecC
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~G~~~~~~d~VVlA~ 131 (235)
....+.+.+..+++++++++|.+|.. ++++. .+...+|+.+ .+|.||++.
T Consensus 197 ~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~~v~l~dG~~i-~aD~Vv~a~ 247 (415)
T 3lxd_A 197 SEFYQAEHRAHGVDLRTGAAMDCIEG--DGTKVTGVRMQDGSVI-PADIVIVGI 247 (415)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEE--SSSBEEEEEESSSCEE-ECSEEEECS
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEe--cCCcEEEEEeCCCCEE-EcCEEEECC
Confidence 33344444456899999999999986 44444 5777888653 799999983
No 73
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=80.67 E-value=2.4 Score=34.96 Aligned_cols=47 Identities=6% Similarity=0.010 Sum_probs=34.1
Q ss_pred HHhcCCCCeeEcCeeEEEEEeecC-CCCeEEEeCCCcccccccEEEecC
Q 026682 84 ALCHQPGVESKFGVGVGRFEWLED-KNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~-~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..++..+++++++++|..+.+... ++.|.+..++|+. ..||.||+|.
T Consensus 64 ~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~-~~~~~lv~At 111 (310)
T 1fl2_A 64 VHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAV-LKARSIIVAT 111 (310)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCE-EEEEEEEECC
T ss_pred HHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCE-EEeCEEEECc
Confidence 334456788999999999975111 2379999888854 3799999993
No 74
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=80.32 E-value=1.8 Score=37.91 Aligned_cols=46 Identities=26% Similarity=0.380 Sum_probs=34.6
Q ss_pred HHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+..++..+++++++++|.+|+. +++...+...+|+.+ .+|.||++
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i-~aD~Vv~a 236 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSF-VADSALIC 236 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEE-ECSEEEEC
T ss_pred HHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEE-EcCEEEEe
Confidence 33334445789999999999985 455567888888653 79999998
No 75
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=80.16 E-value=3.3 Score=35.05 Aligned_cols=41 Identities=7% Similarity=0.058 Sum_probs=32.6
Q ss_pred CCCCeeEcCeeEEEEEeecCCC-CeEEEeCCCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..+.+++++++|..|.. .++ .|.|.+.+|+. ..||.||+|.
T Consensus 86 ~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g~~-~~~~~li~At 127 (360)
T 3ab1_A 86 RYNPDVVLNETVTKYTK--LDDGTFETRTNTGNV-YRSRAVLIAA 127 (360)
T ss_dssp TTCCEEECSCCEEEEEE--CTTSCEEEEETTSCE-EEEEEEEECC
T ss_pred HhCCEEEcCCEEEEEEE--CCCceEEEEECCCcE-EEeeEEEEcc
Confidence 35678999999999987 443 79999888854 3699999994
No 76
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=80.10 E-value=2.7 Score=34.56 Aligned_cols=40 Identities=13% Similarity=0.060 Sum_probs=31.1
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+..++++++ ++|.+|.. +++.|.+..++|..+ .||.||+|
T Consensus 81 ~~~~v~~~~-~~v~~i~~--~~~~~~v~~~~g~~~-~~d~lvlA 120 (323)
T 3f8d_A 81 EKYEVPVLL-DIVEKIEN--RGDEFVVKTKRKGEF-KADSVILG 120 (323)
T ss_dssp HTTTCCEEE-SCEEEEEE--C--CEEEEESSSCEE-EEEEEEEC
T ss_pred HHcCCEEEE-EEEEEEEe--cCCEEEEEECCCCEE-EcCEEEEC
Confidence 345778888 89999987 777899998887653 79999999
No 77
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=79.91 E-value=2.4 Score=38.34 Aligned_cols=42 Identities=19% Similarity=-0.016 Sum_probs=33.1
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCc--ccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ--SLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~--~~~~~d~VVlA~ 131 (235)
..+++|+++++|.+|+. ++++++++..+|. ....+|.||.|+
T Consensus 119 ~~gv~v~~~~~v~~i~~--~~~~v~v~~~~~~g~~~~~a~~vVgAD 162 (499)
T 2qa2_A 119 GRGAELLRGHTVRALTD--EGDHVVVEVEGPDGPRSLTTRYVVGCD 162 (499)
T ss_dssp HTTCEEEESCEEEEEEE--CSSCEEEEEECSSCEEEEEEEEEEECC
T ss_pred hCCCEEEcCCEEEEEEE--eCCEEEEEEEcCCCcEEEEeCEEEEcc
Confidence 35789999999999987 7778998876653 124689999984
No 78
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=79.40 E-value=1.7 Score=38.46 Aligned_cols=40 Identities=18% Similarity=0.078 Sum_probs=32.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+++++++++|.+|+. +++++.+..++|+. ..+|.||+|.
T Consensus 221 ~Gv~i~~~~~V~~i~~--~~~~v~v~~~~g~~-i~~D~vv~A~ 260 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVP--EAKGARVELEGGEV-LEADRVLVAV 260 (455)
T ss_dssp HTCEEECSCCEEEEEE--ETTEEEEEETTSCE-EEESEEEECS
T ss_pred CCCEEEECCEEEEEEE--eCCEEEEEECCCeE-EEcCEEEECc
Confidence 4789999999999986 55678887777754 3799999983
No 79
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=79.15 E-value=3.5 Score=36.43 Aligned_cols=48 Identities=10% Similarity=-0.087 Sum_probs=35.6
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
...+..++..+++++++++|.+|+. .++++.+..++| . ..+|.||+|.
T Consensus 193 ~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~v~~~~g-~-i~aD~Vv~A~ 240 (452)
T 3oc4_A 193 AEVQKSLEKQAVIFHFEETVLGIEE--TANGIVLETSEQ-E-ISCDSGIFAL 240 (452)
T ss_dssp HHHHHHHHTTTEEEEETCCEEEEEE--CSSCEEEEESSC-E-EEESEEEECS
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEc--cCCeEEEEECCC-E-EEeCEEEECc
Confidence 3334444456789999999999986 566777877766 3 4799999993
No 80
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=78.35 E-value=1.9 Score=38.54 Aligned_cols=43 Identities=28% Similarity=0.420 Sum_probs=30.2
Q ss_pred CCCe--eEcCeeEEEEEeecCCCCeEEEeCC---Cc-ccccccEEEecC
Q 026682 89 PGVE--SKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~--i~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVlA~ 131 (235)
.+++ |+++++|..|++..+.++|.|+..+ |+ ....||.||+|.
T Consensus 114 ~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 114 AGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp HTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred cCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 4555 8999999999872222379987654 42 224799999993
No 81
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=78.07 E-value=3.1 Score=37.45 Aligned_cols=47 Identities=15% Similarity=0.054 Sum_probs=35.2
Q ss_pred HHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.....+..+++++++++|.+|+. +++...+...+|+. ..+|.||++.
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~--~~~~~~v~l~dG~~-i~aD~Vv~a~ 278 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGV--SSGKLLIKLKDGRK-VETDHIVAAV 278 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEE--ETTEEEEEETTSCE-EEESEEEECC
T ss_pred HHHHHHhcCCEEEeCCEEEEEEe--cCCeEEEEECCCCE-EECCEEEECC
Confidence 33344456899999999999985 45566777788865 3799999983
No 82
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=77.82 E-value=2.7 Score=38.14 Aligned_cols=48 Identities=21% Similarity=0.069 Sum_probs=35.0
Q ss_pred CCCCeeEcCeeEEEEEeecCCCC----eEEEeCCCcccccccEEEecCCCCCcc
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNL----WSVSGLDGQSLGQFNGVVASDKNVVSP 137 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~----w~l~~~~G~~~~~~d~VVlA~~~~pap 137 (235)
..+++++++++|.+|.. .+++ +.+.+++|+....+|.||+|.-..|..
T Consensus 267 ~~GV~i~~~~~V~~i~~--~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEE--DANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HTTCEEESSCEEEEEEE--CTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred hCCcEEEECCEEEEEEE--cCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 35789999999999986 4455 788888885124799999994333443
No 83
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=77.52 E-value=2.7 Score=37.37 Aligned_cols=41 Identities=22% Similarity=0.331 Sum_probs=32.9
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCc-ccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVlA~ 131 (235)
..+++++++++|.+|+. ++++..+.+++|+ . ..+|.||++.
T Consensus 219 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~G~~~-i~~D~vv~a~ 260 (463)
T 2r9z_A 219 AQGIETHLEFAVAALER--DAQGTTLVAQDGTRL-EGFDSVIWAV 260 (463)
T ss_dssp HTTCEEESSCCEEEEEE--ETTEEEEEETTCCEE-EEESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--eCCeEEEEEeCCcEE-EEcCEEEECC
Confidence 35789999999999986 4556888888886 4 3799999983
No 84
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=76.74 E-value=2.3 Score=38.38 Aligned_cols=42 Identities=17% Similarity=-0.008 Sum_probs=32.7
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCc--ccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ--SLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~--~~~~~d~VVlA~ 131 (235)
..+++|+++++|++|+. ++++++++..+|. ....+|.||.|+
T Consensus 118 ~~gv~v~~~~~v~~i~~--~~~~v~v~~~~~~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 118 GLGADIRRGHEVLSLTD--DGAGVTVEVRGPEGKHTLRAAYLVGCD 161 (500)
T ss_dssp HTTCEEEETCEEEEEEE--ETTEEEEEEEETTEEEEEEESEEEECC
T ss_pred HCCCEEECCcEEEEEEE--cCCeEEEEEEcCCCCEEEEeCEEEECC
Confidence 35789999999999987 6678988776653 124789999984
No 85
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=76.11 E-value=3.9 Score=35.02 Aligned_cols=49 Identities=14% Similarity=0.015 Sum_probs=35.3
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecC-CCCeEEEe-CCCcc-cccccEEEecC
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLED-KNLWSVSG-LDGQS-LGQFNGVVASD 131 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~-~~~w~l~~-~~G~~-~~~~d~VVlA~ 131 (235)
.|.+.+.+ .+++|+++++|++|+. + +++|.+.. ++|+. ...+|.||.|+
T Consensus 108 ~L~~~~~~-~g~~i~~~~~v~~i~~--~~~~~~~v~~~~~g~~~~~~a~~vV~Ad 159 (394)
T 1k0i_A 108 DLMEAREA-CGATTVYQAAEVRLHD--LQGERPYVTFERDGERLRLDCDYIAGCD 159 (394)
T ss_dssp HHHHHHHH-TTCEEESSCEEEEEEC--TTSSSCEEEEEETTEEEEEECSEEEECC
T ss_pred HHHHHHHh-cCCeEEeceeEEEEEE--ecCCceEEEEecCCcEEEEEeCEEEECC
Confidence 34444443 3788999999999985 4 35788887 67751 24789999994
No 86
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=76.08 E-value=3.3 Score=35.98 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=32.8
Q ss_pred HHhcCCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEec
Q 026682 84 ALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA 130 (235)
.+.+..+++++++++|.+|.. ++++ ..+..++|+.+ .+|.||++
T Consensus 192 ~~l~~~GV~i~~~~~v~~i~~--~~~~v~~V~~~dG~~i-~aD~Vv~a 236 (404)
T 3fg2_P 192 DRHSGAGIRMHYGVRATEIAA--EGDRVTGVVLSDGNTL-PCDLVVVG 236 (404)
T ss_dssp HHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTSCEE-ECSEEEEC
T ss_pred HHHHhCCcEEEECCEEEEEEe--cCCcEEEEEeCCCCEE-EcCEEEEC
Confidence 333446889999999999985 4333 35777888653 79999998
No 87
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=75.72 E-value=1.6 Score=38.02 Aligned_cols=38 Identities=11% Similarity=0.004 Sum_probs=25.2
Q ss_pred CCCeeEcCeeEE---------EEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVG---------RFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~---------~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++++++++|+ +|.. ++++|.|.+.+|. ..+|.||+|
T Consensus 185 ~Gv~i~~~~~v~~~~g~~~~~~i~~--~~~~v~v~~~~g~--i~a~~VV~A 231 (405)
T 3c4n_A 185 QGAGLLLNTRAELVPGGVRLHRLTV--TNTHQIVVHETRQ--IRAGVIIVA 231 (405)
T ss_dssp TTCEEECSCEEEEETTEEEEECBCC---------CBCCEE--EEEEEEEEC
T ss_pred CCCEEEcCCEEEeccccccccceEe--eCCeEEEEECCcE--EECCEEEEC
Confidence 578899999999 8875 5667877776663 368999999
No 88
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=75.63 E-value=4.1 Score=36.64 Aligned_cols=42 Identities=12% Similarity=0.061 Sum_probs=32.7
Q ss_pred cCCCCeeEcCeeEEEEEeecCC-CCeEEEeCCCcccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~-~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+|+. ++ +...+...+|+. ..+|.||++.
T Consensus 246 ~~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G~~-i~~D~vv~a~ 288 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSL--NTDGSKHVTFESGKT-LDVDVVMMAI 288 (495)
T ss_dssp HHTTCEEEESCCEEEEEE--CTTSCEEEEETTSCE-EEESEEEECS
T ss_pred HhCCCEEEeCCEEEEEEE--cCCceEEEEECCCcE-EEcCEEEECC
Confidence 345789999999999986 43 347888888864 4799999993
No 89
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=75.58 E-value=3.8 Score=33.67 Aligned_cols=42 Identities=17% Similarity=0.347 Sum_probs=32.2
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
++..++++++ ++|.+|.. .+++|.+...+|+. ..||.||+|.
T Consensus 69 ~~~~~v~~~~-~~v~~i~~--~~~~~~v~~~~g~~-~~~~~vv~At 110 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSK--KDSHFVILAEDGKT-FEAKSVIIAT 110 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEE--ETTEEEEEETTSCE-EEEEEEEECC
T ss_pred HHHcCCEEEE-EEEEEEEE--cCCEEEEEEcCCCE-EECCEEEECC
Confidence 3345778888 78999986 56679998777754 3799999994
No 90
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=75.56 E-value=3.4 Score=36.56 Aligned_cols=41 Identities=10% Similarity=-0.013 Sum_probs=32.1
Q ss_pred CCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..+++++++++|.+|+. ++++ +.+...+|+. ..+|.||+|.
T Consensus 220 ~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~-i~~D~vv~a~ 261 (450)
T 1ges_A 220 AEGPQLHTNAIPKAVVK--NTDGSLTLELEDGRS-ETVDCLIWAI 261 (450)
T ss_dssp HHSCEEECSCCEEEEEE--CTTSCEEEEETTSCE-EEESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--eCCcEEEEEECCCcE-EEcCEEEECC
Confidence 35789999999999986 4433 7888888864 3799999983
No 91
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=75.43 E-value=3.8 Score=36.05 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=31.9
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeC---CCcc-cccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQS-LGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~G~~-~~~~d~VVlA 130 (235)
.+++++++++|++++. ++++|.|... +|+. ...+|.||+|
T Consensus 329 ~~v~i~~~~~v~~v~~--~~~~~~v~~~~~~~g~~~~~~~D~Vv~A 372 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA--TAQGIELALRDAGSGELSVETYDAVILA 372 (463)
T ss_dssp CCSEEETTEEEEEEEE--ETTEEEEEEEETTTCCEEEEEESEEEEC
T ss_pred CCeEEEeCCEEEEEEe--cCCEEEEEEEEcCCCCeEEEECCEEEEe
Confidence 4678999999999986 6678988765 5642 2479999999
No 92
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=75.19 E-value=3.6 Score=36.96 Aligned_cols=41 Identities=10% Similarity=0.107 Sum_probs=32.2
Q ss_pred CCCCeeEcCeeEEEEEeecCCC-CeEEEeCCCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..+++++++++|.+|+. +++ .+.+..++|+. ..+|.||+|.
T Consensus 243 ~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G~~-i~~D~vv~a~ 284 (490)
T 1fec_A 243 ANGINVRTHENPAKVTK--NADGTRHVVFESGAE-ADYDVVMLAI 284 (490)
T ss_dssp HTTEEEEETCCEEEEEE--CTTSCEEEEETTSCE-EEESEEEECS
T ss_pred hCCCEEEeCCEEEEEEE--cCCCEEEEEECCCcE-EEcCEEEEcc
Confidence 35788999999999986 443 47888888864 3799999993
No 93
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=74.46 E-value=3.9 Score=33.15 Aligned_cols=38 Identities=8% Similarity=-0.111 Sum_probs=28.8
Q ss_pred CCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 90 GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
++++. +++|..|.+ ++++|.+..++|+. ..||.||+|.
T Consensus 71 ~v~~~-~~~v~~i~~--~~~~~~v~~~~g~~-~~~d~vviAt 108 (297)
T 3fbs_A 71 TIHWV-EGRVTDAKG--SFGEFIVEIDGGRR-ETAGRLILAM 108 (297)
T ss_dssp TEEEE-ESCEEEEEE--ETTEEEEEETTSCE-EEEEEEEECC
T ss_pred CeEEE-EeEEEEEEE--cCCeEEEEECCCCE-EEcCEEEECC
Confidence 33443 569999987 66789999988864 3799999993
No 94
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=74.16 E-value=4.4 Score=35.90 Aligned_cols=40 Identities=10% Similarity=-0.003 Sum_probs=32.1
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCC-eEEE-eCCCcccccccEEEec
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNL-WSVS-GLDGQSLGQFNGVVAS 130 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~-w~l~-~~~G~~~~~~d~VVlA 130 (235)
+..+++++++++|.+|+. ++++ ..|. .++|+ ..+|.||+|
T Consensus 222 ~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~g~--i~aD~Vv~a 263 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSA--DADGRRVATTMKHGE--IVADQVMLA 263 (463)
T ss_dssp HHTTCEEECSCCEEEEEE--CTTSCEEEEESSSCE--EEESEEEEC
T ss_pred HHCCCEEECCCEEEEEEE--cCCCEEEEEEcCCCe--EEeCEEEEe
Confidence 345789999999999986 5444 6788 88886 479999998
No 95
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=73.40 E-value=3.6 Score=35.76 Aligned_cols=37 Identities=5% Similarity=0.117 Sum_probs=29.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++++++++|++|.+ +++ ++..++|+.+ .||.||+|
T Consensus 75 ~~i~~~~~~~V~~id~--~~~--~v~~~~g~~~-~yd~lvlA 111 (385)
T 3klj_A 75 NNIKVITSEFATSIDP--NNK--LVTLKSGEKI-KYEKLIIA 111 (385)
T ss_dssp TTCEEECSCCEEEEET--TTT--EEEETTSCEE-ECSEEEEC
T ss_pred CCCEEEeCCEEEEEEC--CCC--EEEECCCCEE-ECCEEEEe
Confidence 5678999999999985 443 5666777653 79999999
No 96
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=71.86 E-value=4.8 Score=35.74 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=31.9
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeC-C--Cc-ccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL-D--GQ-SLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~--G~-~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+|+. +++++.+... + |+ ....+|.||+|.
T Consensus 221 ~~~gV~i~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vv~a~ 267 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEK--KKDGLHVRLEPAEGGEGEEVVVDKVLVAV 267 (464)
T ss_dssp HHTTCEEECSEEEEEEEE--ETTEEEEEEEETTCCSCEEEEESEEEECS
T ss_pred HhcCCEEEcCCEEEEEEE--eCCEEEEEEeecCCCceeEEEcCEEEECC
Confidence 345789999999999986 5556777654 5 65 124799999983
No 97
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=71.59 E-value=4.3 Score=36.22 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=30.9
Q ss_pred CCCeeEcCeeEEEEEeecCCCC--eEEEeCCC-cccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNL--WSVSGLDG-QSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~G-~~~~~~d~VVlA~ 131 (235)
.+++++++++|.+|+. ++++ ..+..++| +. ..+|.||+|.
T Consensus 239 ~Gv~i~~~~~v~~i~~--~~~~~~~~v~~~~G~~~-i~~D~vv~a~ 281 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEK--NVETDKLKIHMNDSKSI-DDVDELIWTI 281 (479)
T ss_dssp HTCEEECSCCEEEEEE--CC-CCCEEEEETTSCEE-EEESEEEECS
T ss_pred CCeEEEeCCEEEEEEE--cCCCcEEEEEECCCcEE-EEcCEEEECC
Confidence 4789999999999985 4444 67777788 44 3799999983
No 98
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=71.39 E-value=2.5 Score=39.00 Aligned_cols=41 Identities=24% Similarity=0.138 Sum_probs=32.7
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEe--CCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSG--LDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~--~~G~~~~~~d~VVlA~ 131 (235)
.+++|+++++|++|+. ++++|.++. .+|+....+|.||.|+
T Consensus 161 ~gv~i~~~~~v~~l~~--~~~~v~v~~~~~~G~~~~~a~~vV~AD 203 (570)
T 3fmw_A 161 AGAEIPRGHEVTRLRQ--DAEAVEVTVAGPSGPYPVRARYGVGCD 203 (570)
T ss_dssp HTEECCBSCEEEECCB--CSSCEEEEEEETTEEEEEEESEEEECS
T ss_pred CCCEEEeCCEEEEEEE--cCCeEEEEEEeCCCcEEEEeCEEEEcC
Confidence 4778999999999987 778898877 6672224799999994
No 99
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=71.05 E-value=6.8 Score=33.42 Aligned_cols=45 Identities=11% Similarity=0.020 Sum_probs=33.4
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.|.+.+.+ .+++|+++++|++|+. ++ .|+..+|+. ..+|.||.|+
T Consensus 112 ~L~~~~~~-~gv~i~~~~~v~~i~~----~~-~v~~~~g~~-~~ad~vV~Ad 156 (379)
T 3alj_A 112 ALVNRARA-LGVDISVNSEAVAADP----VG-RLTLQTGEV-LEADLIVGAD 156 (379)
T ss_dssp HHHHHHHH-TTCEEESSCCEEEEET----TT-EEEETTSCE-EECSEEEECC
T ss_pred HHHHHHHh-cCCEEEeCCEEEEEEe----CC-EEEECCCCE-EEcCEEEECC
Confidence 34444444 4789999999999973 35 888888864 4789999993
No 100
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=70.92 E-value=6 Score=35.50 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=30.7
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEe---CCCcc-cccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSG---LDGQS-LGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~---~~G~~-~~~~d~VVlA 130 (235)
.|++++.+++|++|.. +++.|.+.. .+|+. ...+|.||+|
T Consensus 162 ~Gv~i~~~~~V~~l~~--~~~~~~V~~~d~~~G~~~~i~A~~VV~A 205 (501)
T 2qcu_A 162 KGGEVLTRTRATSARR--ENGLWIVEAEDIDTGKKYSWQARGLVNA 205 (501)
T ss_dssp TTCEEECSEEEEEEEE--ETTEEEEEEEETTTCCEEEEEESCEEEC
T ss_pred cCCEEEcCcEEEEEEE--eCCEEEEEEEECCCCCEEEEECCEEEEC
Confidence 4789999999999987 556788876 35641 2368999999
No 101
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=70.85 E-value=3.9 Score=36.99 Aligned_cols=48 Identities=13% Similarity=0.033 Sum_probs=34.4
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCC----CeEEEeCCC--cccccccEEEecC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKN----LWSVSGLDG--QSLGQFNGVVASD 131 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~----~w~l~~~~G--~~~~~~d~VVlA~ 131 (235)
|.+.+.+ .+++|+++++|++|+. +++ +|.+...++ .....+|.||.|+
T Consensus 126 L~~~a~~-~gv~i~~~~~v~~i~~--~~~~~~~~v~v~~~~~~~~~~i~a~~vV~Ad 179 (535)
T 3ihg_A 126 LLAQARK-HGGAIRFGTRLLSFRQ--HDDDAGAGVTARLAGPDGEYDLRAGYLVGAD 179 (535)
T ss_dssp HHHHHHH-TTCEEESSCEEEEEEE--ECGGGCSEEEEEEEETTEEEEEEEEEEEECC
T ss_pred HHHHHHh-CCCEEEeCCEEEEEEE--CCCCccccEEEEEEcCCCeEEEEeCEEEECC
Confidence 3334433 4789999999999987 566 888877654 2224689999993
No 102
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=70.71 E-value=3.9 Score=36.90 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=37.2
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCC------CCeEEEeCCCc----ccccccEEEec
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDK------NLWSVSGLDGQ----SLGQFNGVVAS 130 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~------~~w~l~~~~G~----~~~~~d~VVlA 130 (235)
+..-.+..|+.++..|+++++|+++++...+ +.|+|+..+++ ..-.++.||++
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVla 209 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIA 209 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEEC
Confidence 4555666677777779999999999873222 24999875542 12358999998
No 103
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=70.33 E-value=6.5 Score=32.44 Aligned_cols=40 Identities=10% Similarity=0.146 Sum_probs=31.1
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeC---CCcccccccEEEec
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQSLGQFNGVVAS 130 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~G~~~~~~d~VVlA 130 (235)
+..++++++++ |.++.. .++.|.+... ++.. ..||.||+|
T Consensus 95 ~~~gv~i~~~~-v~~i~~--~~~~~~v~~~~~~~~~~-~~~d~vvlA 137 (338)
T 3itj_A 95 TKFGTEIITET-VSKVDL--SSKPFKLWTEFNEDAEP-VTTDAIILA 137 (338)
T ss_dssp HHTTCEEECSC-EEEEEC--SSSSEEEEETTCSSSCC-EEEEEEEEC
T ss_pred HHcCCEEEEeE-EEEEEE--cCCEEEEEEEecCCCcE-EEeCEEEEC
Confidence 34578899998 999986 7788998774 4443 379999998
No 104
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=70.27 E-value=7.3 Score=34.52 Aligned_cols=43 Identities=12% Similarity=-0.035 Sum_probs=31.3
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCC-eEEEe-----CCCcccccccEEEecC
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNL-WSVSG-----LDGQSLGQFNGVVASD 131 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~-----~~G~~~~~~d~VVlA~ 131 (235)
++..+++++++++|.+|+. ++++ +.+.. .+|.. ..+|.||++.
T Consensus 230 l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~~~~~~~~-i~~D~vv~a~ 278 (474)
T 1zmd_A 230 LQKQGFKFKLNTKVTGATK--KSDGKIDVSIEAASGGKAEV-ITCDVLLVCI 278 (474)
T ss_dssp HHHTTCEEECSEEEEEEEE--CTTSCEEEEEEETTSCCCEE-EEESEEEECS
T ss_pred HHHCCCEEEeCceEEEEEE--cCCceEEEEEEecCCCCceE-EEcCEEEECc
Confidence 3345789999999999986 5555 77763 34443 3799999993
No 105
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=69.92 E-value=5.7 Score=34.20 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=30.4
Q ss_pred CCCeeEcCeeEEEEEeecCCCCe--EEEeCCCcc-cccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLW--SVSGLDGQS-LGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w--~l~~~~G~~-~~~~d~VVlA 130 (235)
.+++|+++++|++|+. +++++ .+.+.+|+. ...+|.||.|
T Consensus 119 ~gv~i~~~~~v~~i~~--~~~~~~v~v~~~~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 119 QGVDVEYEVGVTDIKF--FGTDSVTTIEDINGNKREIEARFIIDA 161 (421)
T ss_dssp HTCEEECSEEEEEEEE--ETTEEEEEEEETTSCEEEEEEEEEEEC
T ss_pred CCCEEEcCCEEEEEEE--eCCEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 4789999999999987 55665 455577762 2368999999
No 106
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=69.65 E-value=6 Score=35.03 Aligned_cols=43 Identities=9% Similarity=-0.061 Sum_probs=30.4
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeC--CCc-ccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL--DGQ-SLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~--~G~-~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+|+. +++++.+... +|+ ....+|.||+|.
T Consensus 227 ~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~~g~~~~i~~D~vv~a~ 272 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTN--NGDSVSLEVEGKNGKRETVTCEALLVSV 272 (468)
T ss_dssp HHTCCEEECSCEEEEEEE--CSSSEEEEEECC---EEEEEESEEEECS
T ss_pred hcCCcEEEeCCEEEEEEE--cCCeEEEEEEcCCCceEEEECCEEEECC
Confidence 445789999999999986 5566777654 562 224799999983
No 107
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=69.64 E-value=6.8 Score=35.12 Aligned_cols=43 Identities=14% Similarity=0.062 Sum_probs=32.6
Q ss_pred cCCCCeeEcCeeEEEEEeecCC-CCeEEEeCCCcccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~-~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+|+. ++ +...+..++|+....+|.||++.
T Consensus 228 ~~~gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~~~D~vi~a~ 271 (500)
T 1onf_A 228 KKNNINIVTFADVVEIKK--VSDKNLSIHLSDGRIYEHFDHVIYCV 271 (500)
T ss_dssp HHTTCEEECSCCEEEEEE--SSTTCEEEEETTSCEEEEESEEEECC
T ss_pred HhCCCEEEECCEEEEEEE--cCCceEEEEECCCcEEEECCEEEECC
Confidence 335789999999999985 43 34788887886413799999993
No 108
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=69.53 E-value=4.7 Score=38.74 Aligned_cols=38 Identities=24% Similarity=0.121 Sum_probs=30.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCe-EEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~G~~~~~~d~VVlA 130 (235)
.|++|+.+++|++|+. +++++ .|.+++|. ..+|.||+|
T Consensus 164 ~Gv~i~~~t~V~~i~~--~~~~v~~V~t~~G~--i~Ad~VV~A 202 (830)
T 1pj5_A 164 AGVTYRGSTTVTGIEQ--SGGRVTGVQTADGV--IPADIVVSC 202 (830)
T ss_dssp TTCEEECSCCEEEEEE--ETTEEEEEEETTEE--EECSEEEEC
T ss_pred cCCEEECCceEEEEEE--eCCEEEEEEECCcE--EECCEEEEC
Confidence 4789999999999986 55554 57777773 368999999
No 109
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=66.38 E-value=4.8 Score=35.90 Aligned_cols=43 Identities=7% Similarity=-0.101 Sum_probs=31.1
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC----CcccccccEEEecC
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD----GQSLGQFNGVVASD 131 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~----G~~~~~~d~VVlA~ 131 (235)
.+..+++++++++|.+|+. ++++..+...+ |+.+ .+|.||++.
T Consensus 236 l~~~gV~i~~~~~v~~i~~--~~~~~~v~~~~~~~~g~~~-~~D~vv~a~ 282 (482)
T 1ojt_A 236 NEYRFDNIMVNTKTVAVEP--KEDGVYVTFEGANAPKEPQ-RYDAVLVAA 282 (482)
T ss_dssp HGGGEEEEECSCEEEEEEE--ETTEEEEEEESSSCCSSCE-EESCEEECC
T ss_pred HHhcCCEEEECCEEEEEEE--cCCeEEEEEeccCCCceEE-EcCEEEECc
Confidence 3345788999999999986 45566666554 5443 699999983
No 110
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=66.30 E-value=7.9 Score=34.79 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=30.8
Q ss_pred CCCeeEcCeeEEEEEeecCCCC---eEEEeCCCc-ccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQ-SLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~---w~l~~~~G~-~~~~~d~VVlA~ 131 (235)
.+++|+++++|++|.. ++++ +.+...+|+ ....+|.||.|+
T Consensus 124 ~Gv~i~~~~~V~~v~~--~~~~v~gv~~~~~dG~~~~i~ad~VI~Ad 168 (512)
T 3e1t_A 124 KGVDVRERHEVIDVLF--EGERAVGVRYRNTEGVELMAHARFIVDAS 168 (512)
T ss_dssp TTCEEESSCEEEEEEE--ETTEEEEEEEECSSSCEEEEEEEEEEECC
T ss_pred CCCEEEcCCEEEEEEE--ECCEEEEEEEEeCCCCEEEEEcCEEEECC
Confidence 5789999999999986 4553 566666774 224789999993
No 111
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=65.85 E-value=5.7 Score=35.18 Aligned_cols=39 Identities=8% Similarity=0.096 Sum_probs=30.4
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..+++++++++|.+|+. +++.+.+.++++ . ..+|.||+|
T Consensus 228 ~~Gv~i~~~~~v~~i~~--~~~~~~v~~~~~-~-i~aD~Vv~a 266 (467)
T 1zk7_A 228 AEGIEVLEHTQASQVAH--MDGEFVLTTTHG-E-LRADKLLVA 266 (467)
T ss_dssp HTTCEEETTCCEEEEEE--ETTEEEEEETTE-E-EEESEEEEC
T ss_pred hCCCEEEcCCEEEEEEE--eCCEEEEEECCc-E-EEcCEEEEC
Confidence 35789999999999986 556677776643 3 379999998
No 112
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=65.74 E-value=8 Score=34.96 Aligned_cols=44 Identities=9% Similarity=0.098 Sum_probs=33.0
Q ss_pred cCCCCeeEcCeeEEEEEeecC-CCCeEEEeCCCcccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLED-KNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~-~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+..+++++++++|..|.+... ++.|.+..++|..+ .||.||+|.
T Consensus 278 ~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~-~~d~vVlAt 322 (521)
T 1hyu_A 278 SDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVL-KARSIIIAT 322 (521)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEE-EEEEEEECC
T ss_pred HHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEE-EcCEEEECC
Confidence 346788999999999975111 34799998888643 699999983
No 113
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=65.72 E-value=8.8 Score=30.44 Aligned_cols=37 Identities=14% Similarity=0.047 Sum_probs=27.6
Q ss_pred CCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEec
Q 026682 90 GVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA 130 (235)
+++++ +++|.+|.. ++++ |.+.+.+|.. ..+|.||+|
T Consensus 83 gv~i~-~~~v~~i~~--~~~~v~~v~~~~g~~-i~a~~VV~A 120 (232)
T 2cul_A 83 PLHLF-QATATGLLL--EGNRVVGVRTWEGPP-ARGEKVVLA 120 (232)
T ss_dssp TEEEE-ECCEEEEEE--ETTEEEEEEETTSCC-EECSEEEEC
T ss_pred CcEEE-EeEEEEEEE--eCCEEEEEEECCCCE-EECCEEEEC
Confidence 66777 679999986 4444 5677777754 378999999
No 114
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=65.61 E-value=4.6 Score=34.36 Aligned_cols=39 Identities=8% Similarity=-0.130 Sum_probs=29.3
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeE-EEeC---CCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWS-VSGL---DGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~-l~~~---~G~~~~~~d~VVlA 130 (235)
.+++|+++++|++|.. +++++. |... +|.. ..+|.||.|
T Consensus 115 ~gv~i~~~~~v~~i~~--~~~~v~gv~~~~~~~~~~-~~a~~vV~A 157 (397)
T 3cgv_A 115 AGADVWVKSPALGVIK--ENGKVAGAKIRHNNEIVD-VRAKMVIAA 157 (397)
T ss_dssp HTCEEESSCCEEEEEE--ETTEEEEEEEEETTEEEE-EEEEEEEEC
T ss_pred CCCEEEECCEEEEEEE--eCCEEEEEEEEECCeEEE-EEcCEEEEC
Confidence 4789999999999987 566776 6553 2323 368999998
No 115
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=65.42 E-value=7.1 Score=34.11 Aligned_cols=40 Identities=25% Similarity=0.160 Sum_probs=29.1
Q ss_pred CCCeeEcCeeEEEEEeec-------------CCCC-eEEEeCCCcccc--cccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLE-------------DKNL-WSVSGLDGQSLG--QFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~-------------~~~~-w~l~~~~G~~~~--~~d~VVlA 130 (235)
.+++++.+++|++|.... .+++ |.|.+++|. . .+|.||+|
T Consensus 194 ~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~--i~~~Ad~VV~A 249 (448)
T 3axb_A 194 AGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGT--RVEVGEKLVVA 249 (448)
T ss_dssp TTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSC--EEEEEEEEEEC
T ss_pred CCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCE--EeecCCEEEEC
Confidence 478999999999997410 1233 678777773 3 58999999
No 116
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=65.07 E-value=7 Score=34.62 Aligned_cols=42 Identities=17% Similarity=0.255 Sum_probs=31.0
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeCCC--cccccccEEEec
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG--QSLGQFNGVVAS 130 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G--~~~~~~d~VVlA 130 (235)
+..+++++++++|.+++. ++++..+...++ .....+|.||++
T Consensus 232 ~~~Gv~v~~~~~v~~i~~--~~~~~~v~~~~~~g~~~~~~D~vi~a 275 (476)
T 3lad_A 232 TKQGLKILLGARVTGTEV--KNKQVTVKFVDAEGEKSQAFDKLIVA 275 (476)
T ss_dssp HHTTEEEEETCEEEEEEE--CSSCEEEEEESSSEEEEEEESEEEEC
T ss_pred HhCCCEEEECCEEEEEEE--cCCEEEEEEEeCCCcEEEECCEEEEe
Confidence 335788999999999986 666777766543 222479999998
No 117
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=64.85 E-value=6 Score=32.80 Aligned_cols=39 Identities=10% Similarity=0.112 Sum_probs=30.5
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..++++++++ |..|.. .+++|++.. +|.. ..||.||+|+
T Consensus 82 ~~gv~~~~~~-v~~i~~--~~~~~~v~~-~~~~-~~~~~vv~A~ 120 (333)
T 1vdc_A 82 RFGTTIFTET-VTKVDF--SSKPFKLFT-DSKA-ILADAVILAI 120 (333)
T ss_dssp HTTCEEECCC-CCEEEC--SSSSEEEEC-SSEE-EEEEEEEECC
T ss_pred HCCCEEEEeE-EEEEEE--cCCEEEEEE-CCcE-EEcCEEEECC
Confidence 3567899987 999986 677899987 6644 3799999994
No 118
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=64.18 E-value=13 Score=33.77 Aligned_cols=50 Identities=8% Similarity=0.038 Sum_probs=32.6
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCC-CC---eEEEeCCCcc-cccccEEEecCCC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKN 133 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~-~~---w~l~~~~G~~-~~~~d~VVlA~~~ 133 (235)
|.+.+.+ .+++|+++++|++|.. ++ ++ +.+...+|+. ...+|.||+|.-+
T Consensus 261 L~~~~~~-~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 261 LYDNAVK-RNIDLRMNTRGIEVLK--DDKGTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHH-TTCEEESSEEEEEEEE--CTTSCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHh-cCCEEEeCCEeeEeEE--cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 3333333 4789999999999986 44 43 3444436641 2368999999544
No 119
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=63.80 E-value=11 Score=34.43 Aligned_cols=52 Identities=15% Similarity=0.153 Sum_probs=33.9
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCC-CC---eEEEeCCCcc-cccccEEEecCCCC
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKNV 134 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~-~~---w~l~~~~G~~-~~~~d~VVlA~~~~ 134 (235)
.|.+.+.+ .+++|+++++|++|.. ++ ++ +.+...+|+. ...+|.||+|.-+.
T Consensus 255 ~L~~~~~~-~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 255 TLRKAAKE-QGIDTRLNSRVVKLVV--NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHHH-TTCCEECSEEEEEEEE--CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHh-cCCEEEeCCEEEEEEE--CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 34444433 4789999999999986 44 43 4454446642 23679999995443
No 120
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=62.53 E-value=8.9 Score=31.46 Aligned_cols=40 Identities=8% Similarity=0.156 Sum_probs=30.0
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
++..++++++++ |..+.. .++.|.+ ..+|.. ..||.||+|
T Consensus 72 ~~~~~~~~~~~~-v~~i~~--~~~~~~v-~~~~~~-~~~~~lv~A 111 (320)
T 1trb_A 72 ATKFETEIIFDH-INKVDL--QNRPFRL-NGDNGE-YTCDALIIA 111 (320)
T ss_dssp HHHTTCEEECCC-EEEEEC--SSSSEEE-EESSCE-EEEEEEEEC
T ss_pred HHHCCCEEEEee-eeEEEe--cCCEEEE-EeCCCE-EEcCEEEEC
Confidence 334577889886 999986 6778988 555644 369999998
No 121
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=62.51 E-value=14 Score=32.85 Aligned_cols=39 Identities=15% Similarity=-0.026 Sum_probs=30.4
Q ss_pred CCCeeEcCeeEEEEEeecCCCC--eEEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+++++.+ +|++|.. ++++ +.|.+++|+. ..+|.||.|+
T Consensus 186 ~gv~~~~~-~v~~i~~--~~~~~~~~v~~~~g~~-~~ad~vV~A~ 226 (511)
T 2weu_A 186 RGVRHVVD-DVQHVGQ--DERGWISGVHTKQHGE-ISGDLFVDCT 226 (511)
T ss_dssp TTCEEEEC-CEEEEEE--CTTSCEEEEEESSSCE-EECSEEEECC
T ss_pred CCCEEEEC-eEeEEEE--cCCCCEEEEEECCCCE-EEcCEEEECC
Confidence 57889999 9999986 4555 6777778854 3789999993
No 122
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=62.39 E-value=10 Score=33.24 Aligned_cols=42 Identities=19% Similarity=0.112 Sum_probs=30.1
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeE-EEeCCCcccccccEEEecC
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVlA~ 131 (235)
++..+++++++++|.+|+. .+++.. +.. +|+. ..+|.||++.
T Consensus 201 l~~~Gv~i~~~~~v~~i~~--~~~~v~~v~~-~g~~-i~~D~vv~a~ 243 (452)
T 2cdu_A 201 YEAHGVNLVLGSKVAAFEE--VDDEIITKTL-DGKE-IKSDIAILCI 243 (452)
T ss_dssp HHHTTCEEEESSCEEEEEE--ETTEEEEEET-TSCE-EEESEEEECC
T ss_pred HHHCCCEEEcCCeeEEEEc--CCCeEEEEEe-CCCE-EECCEEEECc
Confidence 3346889999999999985 345554 443 6654 3799999993
No 123
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=61.80 E-value=11 Score=33.91 Aligned_cols=54 Identities=17% Similarity=0.180 Sum_probs=35.1
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeec-CCCCeEEEe--C-CCc-ccccccEEEecCCCCC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLE-DKNLWSVSG--L-DGQ-SLGQFNGVVASDKNVV 135 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~-~~~~w~l~~--~-~G~-~~~~~d~VVlA~~~~p 135 (235)
|.+.+.+ .+++|+++++|.+|+... ++++|.+.. . +|+ ....+|.||+|+-.-+
T Consensus 172 L~~~~~~-~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 172 LLKVALL-LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHH-TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHh-CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 3333333 578999999999998510 145788876 4 552 2247899999954333
No 124
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=61.68 E-value=12 Score=32.91 Aligned_cols=41 Identities=12% Similarity=-0.091 Sum_probs=29.1
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeE---EEeC-CCc-ccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWS---VSGL-DGQ-SLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~---l~~~-~G~-~~~~~d~VVlA~ 131 (235)
.+++|+++++|+++.. +++++. +... +|+ ....+|.||.|+
T Consensus 113 ~gv~i~~~~~v~~i~~--~~~~v~gv~~~~~~~G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 113 RGVEIWDLTTAMKPIF--EDGYVKGAVLFNRRTNEELTVYSKVVVEAT 158 (453)
T ss_dssp TTCEEESSEEEEEEEE--ETTEEEEEEEEETTTTEEEEEECSEEEECC
T ss_pred cCCEEEeCcEEEEEEE--ECCEEEEEEEEEcCCCceEEEEcCEEEECc
Confidence 5789999999999986 555543 3333 664 124789999994
No 125
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=61.23 E-value=8.1 Score=32.44 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=30.6
Q ss_pred CC-CeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+ ++++++++|.+|+. .+++..+...+|+....+|.||++
T Consensus 227 ~g~v~~~~~~~v~~i~~--~~~~~~v~~~~g~~~~~~d~vi~a 267 (369)
T 3d1c_A 227 GARIEMNVHYTVKDIDF--NNGQYHISFDSGQSVHTPHEPILA 267 (369)
T ss_dssp TCCEEEECSCCEEEEEE--ETTEEEEEESSSCCEEESSCCEEC
T ss_pred CCcEEEecCcEEEEEEe--cCCceEEEecCCeEeccCCceEEe
Confidence 44 78999999999975 456677877888654446888888
No 126
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=61.12 E-value=12 Score=30.78 Aligned_cols=51 Identities=10% Similarity=0.031 Sum_probs=34.1
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCCCC---eEEEe-CCCc-ccccccEEEec
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~---w~l~~-~~G~-~~~~~d~VVlA 130 (235)
...+.+.|.+..+++++++++|.+|.. ++++ ..+.. .+|+ ....+|.||++
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~~~~~v~~~~~~~g~~~~i~~D~vi~a 266 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKG--DGKLLNALRIKNTKKNEETDLPVSGLFYA 266 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEE--SSSSEEEEEEEETTTTEEEEEECSEEEEC
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEc--ccCcEEEEEEEECCCCceEEEEeCEEEEE
Confidence 355666776655788999999999986 4443 33433 1232 22479999999
No 127
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.95 E-value=11 Score=33.24 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=30.4
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeC---CCc-ccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQ-SLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~G~-~~~~~d~VVlA~ 131 (235)
..+++++++++|.+|+. ++++..+... +|+ ....+|.||++.
T Consensus 230 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a~ 275 (470)
T 1dxl_A 230 KQGMKFKLKTKVVGVDT--SGDGVKLTVEPSAGGEQTIIEADVVLVSA 275 (470)
T ss_dssp HSSCCEECSEEEEEEEC--SSSSEEEEEEESSSCCCEEEEESEEECCC
T ss_pred HcCCEEEeCCEEEEEEE--cCCeEEEEEEecCCCcceEEECCEEEECC
Confidence 35789999999999985 5556766643 442 224799999983
No 128
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=60.83 E-value=13 Score=30.24 Aligned_cols=50 Identities=22% Similarity=0.182 Sum_probs=34.9
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC---Cc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVlA 130 (235)
..+.+.+.+..+++++++++|.++.. +++...+...+ |+ ....+|.||++
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a 246 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKG--DKVVKQVVVENLKTGEIKELNVNGVFIE 246 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEec--cCceeEEEEEECCCCceEEEEcCEEEEE
Confidence 35667777766889999999999985 44433444433 64 13479999999
No 129
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=60.10 E-value=14 Score=32.90 Aligned_cols=48 Identities=10% Similarity=0.147 Sum_probs=34.5
Q ss_pred HHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEe-CCCc-ccccccEEEecC
Q 026682 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVASD 131 (235)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~G~-~~~~~d~VVlA~ 131 (235)
.+.+.+..+++++++++|..|.. +++.+.+.. .+|+ ....||.||+|.
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~--~~~~v~v~~~~~g~~~~~~~d~lviAt 148 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDT--EKKIVYAEHTKTKDVFEFSYDRLLIAT 148 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHHHhhcCCEEEeCCEEEEEEC--CCCEEEEEEcCCCceEEEEcCEEEECC
Confidence 34455555788999999999986 666787765 4564 124799999993
No 130
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=60.07 E-value=15 Score=33.55 Aligned_cols=52 Identities=15% Similarity=0.090 Sum_probs=32.9
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCC-CC---eEEEeCCCc-ccccccEEEecCCCCC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQ-SLGQFNGVVASDKNVV 135 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~-~~---w~l~~~~G~-~~~~~d~VVlA~~~~p 135 (235)
|.+.+.+ .+++|+++++|.+|.. ++ ++ +.+...+|+ ....+|.||+|.-+.+
T Consensus 261 L~~~~~~-~gv~i~~~t~v~~l~~--~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 261 LWDNAVK-RGTDIRLNSRVVRILE--DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHH-TTCEEESSEEEEEEEE--C--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHH-cCCeEEecCEEEEEEE--CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 4444433 4789999999999975 44 33 344444664 2236899999954443
No 131
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=59.92 E-value=13 Score=33.65 Aligned_cols=37 Identities=24% Similarity=0.103 Sum_probs=29.2
Q ss_pred CCeeEcCeeEEEEEeecCCCC--eEEEeCCCcccccccEEEec
Q 026682 90 GVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~--w~l~~~~G~~~~~~d~VVlA 130 (235)
+++++++ +|++|.. ++++ +.|.+.+|+. ..+|.||.|
T Consensus 209 Gv~i~~~-~V~~i~~--~~~g~~~~v~~~~G~~-i~ad~vI~A 247 (550)
T 2e4g_A 209 GVRHVED-RVEHVQR--DANGNIESVRTATGRV-FDADLFVDC 247 (550)
T ss_dssp CCEEEEC-CEEEEEE--CTTSCEEEEEETTSCE-EECSEEEEC
T ss_pred CcEEEEC-eEeEEEE--cCCCCEEEEEECCCCE-EECCEEEEC
Confidence 7889999 9999986 4455 5677777854 368999999
No 132
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=59.46 E-value=11 Score=33.28 Aligned_cols=42 Identities=17% Similarity=0.020 Sum_probs=30.8
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeC-CCc-ccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL-DGQ-SLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~G~-~~~~~d~VVlA~ 131 (235)
..+++++++++|.+|+. ++++..+... +|+ ....+|.||++.
T Consensus 224 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~g~~~~~~~D~vv~a~ 267 (464)
T 2a8x_A 224 KLGVTILTATKVESIAD--GGSQVTVTVTKDGVAQELKAEKVLQAI 267 (464)
T ss_dssp HHTCEEECSCEEEEEEE--CSSCEEEEEESSSCEEEEEESEEEECS
T ss_pred HcCCEEEeCcEEEEEEE--cCCeEEEEEEcCCceEEEEcCEEEECC
Confidence 35789999999999986 5556777654 552 224799999983
No 133
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=58.52 E-value=11 Score=34.07 Aligned_cols=55 Identities=11% Similarity=0.117 Sum_probs=36.5
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeec-----------------CCCCeEEEeCCCcccccccEEEecCCCCCc
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLE-----------------DKNLWSVSGLDGQSLGQFNGVVASDKNVVS 136 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~-----------------~~~~w~l~~~~G~~~~~~d~VVlA~~~~pa 136 (235)
..+..++..+++++++++|.+|+... .+++..+...+|+. ..+|.||++.-..|.
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGEL-LETDLLIMAIGVRPE 268 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCE-EEESEEEECSCEEEC
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCE-EEcCEEEECcCCccc
Confidence 33333444678999999999997410 24566777777764 479999999333343
No 134
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=58.26 E-value=14 Score=33.15 Aligned_cols=54 Identities=19% Similarity=0.233 Sum_probs=33.2
Q ss_pred HHHHHHhc---CCCCeeEcCeeEEEEEeecC-CCCeE-EEeC-CCc-cccccc-EEEecCCCCC
Q 026682 80 SICKALCH---QPGVESKFGVGVGRFEWLED-KNLWS-VSGL-DGQ-SLGQFN-GVVASDKNVV 135 (235)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~-~~~w~-l~~~-~G~-~~~~~d-~VVlA~~~~p 135 (235)
.+.+.|.+ ..+++|+++++|++|.. + ++.+. +... +|+ ....+| .||||.-+..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~--~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVT--DDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEE--CTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEE--CCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 55555443 24789999999999986 4 34332 3322 332 223685 9999955544
No 135
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.83 E-value=8.1 Score=34.02 Aligned_cols=41 Identities=15% Similarity=-0.020 Sum_probs=29.8
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeC---CCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~G~~~~~~d~VVlA~ 131 (235)
..+++++++++|.+++. ++++..+... +|.. ..+|.||++.
T Consensus 223 ~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~g~~~~-~~~D~vv~a~ 266 (455)
T 1ebd_A 223 KKGVEVVTNALAKGAEE--REDGVTVTYEANGETKT-IDADYVLVTV 266 (455)
T ss_dssp HTTCEEEESEEEEEEEE--ETTEEEEEEEETTEEEE-EEESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--eCCeEEEEEEeCCceeE-EEcCEEEECc
Confidence 35789999999999986 4556766543 2333 3799999993
No 136
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=55.53 E-value=14 Score=30.48 Aligned_cols=40 Identities=10% Similarity=-0.036 Sum_probs=29.5
Q ss_pred CCCCeeEcCeeEEEEEeecC--CCC-eEEEeCCCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLED--KNL-WSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~--~~~-w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..+++++. ++|..|.. . +++ |.+...+|+. ..||.||+|.
T Consensus 77 ~~gv~~~~-~~v~~i~~--~~~~~~~~~v~~~~g~~-~~~~~vv~At 119 (325)
T 2q7v_A 77 KFGAKVEM-DEVQGVQH--DATSHPYPFTVRGYNGE-YRAKAVILAT 119 (325)
T ss_dssp HTTCEEEE-CCEEEEEE--CTTSSSCCEEEEESSCE-EEEEEEEECC
T ss_pred HcCCEEEe-eeEEEEEe--ccCCCceEEEEECCCCE-EEeCEEEECc
Confidence 35677877 68999986 4 444 8887777754 3799999993
No 137
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=55.51 E-value=16 Score=29.57 Aligned_cols=50 Identities=18% Similarity=0.035 Sum_probs=34.8
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCC---eEEEeCCCc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~---w~l~~~~G~-~~~~~d~VVlA 130 (235)
..+.+.+.+..+++++++++|.+|.. ++++ ..+...+|+ ....+|.||++
T Consensus 186 ~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~~v~~~~~~g~~~~~~~D~vv~a 239 (315)
T 3r9u_A 186 PSTVEKVKKNEKIELITSASVDEVYG--DKMGVAGVKVKLKDGSIRDLNVPGIFTF 239 (315)
T ss_dssp HHHHHHHHHCTTEEEECSCEEEEEEE--ETTEEEEEEEECTTSCEEEECCSCEEEC
T ss_pred HHHHHHHHhcCCeEEEeCcEEEEEEc--CCCcEEEEEEEcCCCCeEEeecCeEEEE
Confidence 45566666667889999999999985 3322 444444674 23479999999
No 138
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=55.08 E-value=14 Score=32.26 Aligned_cols=44 Identities=30% Similarity=0.328 Sum_probs=31.1
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCe-EEEeCCCcccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~G~~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+|.....+++. .+...+|+.+ .+|.||++.
T Consensus 202 ~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i-~~D~Vv~a~ 246 (431)
T 1q1r_A 202 REAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRL-PADLVIAGI 246 (431)
T ss_dssp HHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEE-ECSEEEECC
T ss_pred HhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEE-EcCEEEECC
Confidence 3357899999999999730012344 6777788653 799999983
No 139
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=55.07 E-value=28 Score=28.52 Aligned_cols=50 Identities=12% Similarity=0.052 Sum_probs=33.6
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCC--CeEEEe-CCCc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKN--LWSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~--~w~l~~-~~G~-~~~~~d~VVlA 130 (235)
..+.+.|.+..+++++++++|.+|.. +++ +..+.. .+|+ ....+|.||++
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a 244 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIF 244 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred hHHHHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEc
Confidence 44566676656788999999999985 433 233332 2564 23479999999
No 140
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=54.98 E-value=22 Score=31.93 Aligned_cols=39 Identities=10% Similarity=0.077 Sum_probs=29.8
Q ss_pred CCCeeEcCeeEEEEEeecCCCC--eEEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+++++.+ +|++|.. ++++ +.|.+.+|+. ..+|.||.|+
T Consensus 178 ~gv~~~~~-~v~~i~~--~~~g~~~~v~~~~g~~-i~ad~vV~A~ 218 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRL--NNRGYISNLLTKEGRT-LEADLFIDCS 218 (538)
T ss_dssp TTCEEEEC-CEEEEEE--CTTSCEEEEEETTSCE-ECCSEEEECC
T ss_pred CCCEEEEe-eEeEEEE--cCCCcEEEEEECCCcE-EEeCEEEECC
Confidence 57889999 8999986 4444 5777778754 3789999993
No 141
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=54.92 E-value=17 Score=33.04 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=29.1
Q ss_pred eEcCeeEEEEEeecCCCCeEEEeCC---Cc-ccccccEEEecC
Q 026682 93 SKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (235)
Q Consensus 93 i~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVlA~ 131 (235)
|+++++|++|+. ++++|.++..+ |+ ....+|.||.|+
T Consensus 152 v~~~~~v~~~~~--~~~~v~v~~~~~~~G~~~~i~a~~vVgAD 192 (549)
T 2r0c_A 152 LRTRSRLDSFEQ--RDDHVRATITDLRTGATRAVHARYLVACD 192 (549)
T ss_dssp EECSEEEEEEEE--CSSCEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred cccCcEEEEEEE--eCCEEEEEEEECCCCCEEEEEeCEEEECC
Confidence 999999999987 77789887654 63 234789999994
No 142
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=54.66 E-value=23 Score=31.29 Aligned_cols=42 Identities=12% Similarity=-0.086 Sum_probs=29.8
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCC--eEEEeCC---Cc---ccccccEEEec
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNL--WSVSGLD---GQ---SLGQFNGVVAS 130 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~---G~---~~~~~d~VVlA 130 (235)
+..+++++++++|.+++. .+++ ..+...+ |+ ....+|.||++
T Consensus 239 ~~~gv~i~~~~~v~~i~~--~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a 288 (478)
T 3dk9_A 239 ENAGVEVLKFSQVKEVKK--TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWA 288 (478)
T ss_dssp HHTTCEEETTEEEEEEEE--CSSSEEEEEEECCTTSCCEEEEEEEESEEEEC
T ss_pred HHCCCEEEeCCEEEEEEE--cCCCcEEEEEEccCCCCcccceEEEcCEEEEe
Confidence 335789999999999986 5455 5566554 21 22479999998
No 143
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=53.42 E-value=18 Score=32.28 Aligned_cols=52 Identities=13% Similarity=0.215 Sum_probs=36.7
Q ss_pred CCchHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 76 ~GM~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+|...+-+.|.+ .++++++++.|.+|.. +++...+.+.+|+.+ .+|.||++.
T Consensus 258 gG~~gle~~l~~-~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i-~aD~Vv~a~ 309 (493)
T 1y56_A 258 SKADEVIQELER-WGIDYVHIPNVKRVEG--NEKVERVIDMNNHEY-KVDALIFAD 309 (493)
T ss_dssp TTHHHHHHHHHH-HTCEEEECSSEEEEEC--SSSCCEEEETTCCEE-ECSEEEECC
T ss_pred CCHHHHHHHHHh-CCcEEEeCCeeEEEec--CCceEEEEeCCCeEE-EeCEEEECC
Confidence 444455455443 6789999999999985 444456667777543 799999993
No 144
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=53.32 E-value=22 Score=31.71 Aligned_cols=39 Identities=18% Similarity=0.020 Sum_probs=29.9
Q ss_pred CeeEcCeeEEEEEeecCCCCeEEEeC--CCc-ccccccEEEecC
Q 026682 91 VESKFGVGVGRFEWLEDKNLWSVSGL--DGQ-SLGQFNGVVASD 131 (235)
Q Consensus 91 ~~i~~~~~V~~i~~~~~~~~w~l~~~--~G~-~~~~~d~VVlA~ 131 (235)
++++++++|.+++. ++++..+... +|+ ....+|.||+|.
T Consensus 229 V~i~~~~~v~~i~~--~~~~v~v~~~~~~G~~~~i~~D~Vi~a~ 270 (492)
T 3ic9_A 229 FYFDAKARVISTIE--KEDAVEVIYFDKSGQKTTESFQYVLAAT 270 (492)
T ss_dssp SEEETTCEEEEEEE--CSSSEEEEEECTTCCEEEEEESEEEECS
T ss_pred cEEEECCEEEEEEE--cCCEEEEEEEeCCCceEEEECCEEEEee
Confidence 78999999999986 6667777664 562 224799999983
No 145
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=53.30 E-value=17 Score=32.31 Aligned_cols=43 Identities=16% Similarity=0.085 Sum_probs=31.0
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeCC---Cc-ccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+++. ++++..+...+ |+ ....+|.||++.
T Consensus 250 ~~~gV~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~ 296 (491)
T 3urh_A 250 TKQGIDFKLGAKVTGAVK--SGDGAKVTFEPVKGGEATTLDAEVVLIAT 296 (491)
T ss_dssp HHTTCEEECSEEEEEEEE--ETTEEEEEEEETTSCCCEEEEESEEEECC
T ss_pred HhCCCEEEECCeEEEEEE--eCCEEEEEEEecCCCceEEEEcCEEEEee
Confidence 335789999999999986 56666665542 52 234799999993
No 146
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=52.71 E-value=9.1 Score=33.60 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=31.0
Q ss_pred HhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 85 LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 85 La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+++..+++++++++|..+.. +.+.+..++|.....||.||+|
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~----~~~~v~~~~g~~~~~~d~lviA 109 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDT----GYVRVRENGGEKSYEWDYLVFA 109 (449)
T ss_dssp HHHHTTCEEETTCEEEEECS----SEEEEECSSSEEEEECSEEEEC
T ss_pred HHHhcCcEEEecCEEEEEec----CCCEEEECCceEEEEcCEEEEC
Confidence 33345788999999999963 3578877766423479999999
No 147
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=52.54 E-value=18 Score=31.31 Aligned_cols=43 Identities=23% Similarity=0.139 Sum_probs=31.1
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..+..++..+++++++++|.+|+ ++ .+...+|+. ..+|.||++
T Consensus 192 ~l~~~l~~~GV~i~~~~~v~~i~---~~---~v~~~~g~~-i~~D~vi~a 234 (408)
T 2gqw_A 192 FVARYHAAQGVDLRFERSVTGSV---DG---VVLLDDGTR-IAADMVVVG 234 (408)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEE---TT---EEEETTSCE-EECSEEEEC
T ss_pred HHHHHHHHcCcEEEeCCEEEEEE---CC---EEEECCCCE-EEcCEEEEC
Confidence 33333444688999999999996 22 566677764 379999999
No 148
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=52.47 E-value=19 Score=29.80 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=29.7
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEE-EeCCCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSV-SGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l-~~~~G~~~~~~d~VVlA~ 131 (235)
..++++++++ |.+|.. ++.|.+ ..++|+. ..||.||+|.
T Consensus 83 ~~~v~~~~~~-v~~i~~---~~~~~v~~~~~g~~-~~~d~lviAt 122 (335)
T 2a87_A 83 RFGADLRMED-VESVSL---HGPLKSVVTADGQT-HRARAVILAM 122 (335)
T ss_dssp HTTCEEECCC-EEEEEC---SSSSEEEEETTSCE-EEEEEEEECC
T ss_pred HcCCEEEEee-EEEEEe---CCcEEEEEeCCCCE-EEeCEEEECC
Confidence 3577899987 888874 457888 7777754 3699999983
No 149
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=51.97 E-value=19 Score=31.95 Aligned_cols=41 Identities=12% Similarity=-0.039 Sum_probs=28.8
Q ss_pred CCCCeeEcCeeEEEEEeecCCC-CeEEEeCCCc----ccccccEEEec
Q 026682 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQ----SLGQFNGVVAS 130 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~G~----~~~~~d~VVlA 130 (235)
..+++++++++|.+|+. .++ ...+...+|. ....+|.||++
T Consensus 239 ~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 239 ERGIPFLRKTVPLSVEK--QDDGKLLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp HTTCCEEETEEEEEEEE--CTTSCEEEEEEETTTCCEEEEEESEEEEC
T ss_pred hCCCEEEeCCEEEEEEE--cCCCcEEEEEecCCCCceeEEEcCEEEEC
Confidence 35788999999999985 433 4556554432 12479999998
No 150
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=51.67 E-value=5.2 Score=34.39 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=31.3
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++++++++|..++. +.+.-.+.+++|+.+ .||.||++
T Consensus 215 ~gi~v~~~~~v~~v~~--~~~~~~v~~~~g~~i-~~D~vi~~ 253 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKT--DTEAMTVETSFGETF-KAAVINLI 253 (401)
T ss_dssp CSEEEECTTTTCEEEE--ETTTTEEEETTSCEE-ECSEEEEC
T ss_pred cCcEEEeCceEEEEEe--cccceEEEcCCCcEE-EeeEEEEe
Confidence 4578999999999986 556667888888754 79999998
No 151
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=51.41 E-value=12 Score=32.26 Aligned_cols=48 Identities=23% Similarity=0.297 Sum_probs=32.5
Q ss_pred HHHHHhcCCC-CeeEcCeeEEEEEeecCCCCeEEEeCC---Cc-ccccccEEEecC
Q 026682 81 ICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (235)
Q Consensus 81 l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVlA~ 131 (235)
|.+.+.+..+ ++|+++++|++|+. +++|.+...+ |+ ....+|.||.|+
T Consensus 113 L~~~~~~~~g~~~v~~~~~v~~i~~---~~~v~v~~~~~~~g~~~~~~ad~vV~Ad 165 (410)
T 3c96_A 113 LLAAVRERLGQQAVRTGLGVERIEE---RDGRVLIGARDGHGKPQALGADVLVGAD 165 (410)
T ss_dssp HHHHHHHHHCTTSEEESEEEEEEEE---ETTEEEEEEEETTSCEEEEEESEEEECC
T ss_pred HHHHHHhhCCCcEEEECCEEEEEec---CCccEEEEecCCCCCceEEecCEEEECC
Confidence 3444433224 47999999999984 4578887654 63 224789999993
No 152
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=51.23 E-value=19 Score=32.75 Aligned_cols=47 Identities=4% Similarity=0.103 Sum_probs=34.2
Q ss_pred HHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEe-CCCc-ccccccEEEec
Q 026682 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~G~-~~~~~d~VVlA 130 (235)
.+.+++..+++++++++|.+|.+ .++.+.+.. .+|+ ....||.||+|
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~--~~~~v~v~~~~~g~~~~~~~d~lviA 147 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINK--EEKTITIKNVTTNETYNEAYDVLILS 147 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHhcCcEEEECCEEEEEEC--CCCEEEEeecCCCCEEEEeCCEEEEC
Confidence 34455456778999999999986 677788865 3454 12469999998
No 153
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=51.18 E-value=10 Score=32.69 Aligned_cols=39 Identities=8% Similarity=0.066 Sum_probs=28.9
Q ss_pred HhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 85 LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 85 La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+.+..+++++++++|.+|+. ++ +..++|+. ..+|.||++
T Consensus 227 ~l~~~gV~~~~~~~v~~i~~----~~--v~~~~g~~-~~~D~vi~a 265 (409)
T 3h8l_A 227 IYNQLGIKLVHNFKIKEIRE----HE--IVDEKGNT-IPADITILL 265 (409)
T ss_dssp HHHHHTCEEECSCCEEEECS----SE--EEETTSCE-EECSEEEEE
T ss_pred HHHHCCCEEEcCCceEEECC----Ce--EEECCCCE-EeeeEEEEC
Confidence 33345789999999999963 23 56677765 379999998
No 154
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=50.28 E-value=18 Score=33.35 Aligned_cols=41 Identities=12% Similarity=0.089 Sum_probs=31.5
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeC-CCc-ccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGL-DGQ-SLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~G~-~~~~~d~VVlA 130 (235)
.+++++++++|++|.. .+++.|.|.+. +|+ ....+|.||.|
T Consensus 141 ~Gv~i~~g~~V~~v~~-~~g~~~~V~~~~~G~~~~i~AdlVV~A 183 (591)
T 3i3l_A 141 RGITVHEETPVTDVDL-SDPDRVVLTVRRGGESVTVESDFVIDA 183 (591)
T ss_dssp TTCEEETTCCEEEEEC-CSTTCEEEEEEETTEEEEEEESEEEEC
T ss_pred CCCEEEeCCEEEEEEE-cCCCEEEEEEecCCceEEEEcCEEEEC
Confidence 5789999999999986 23567888876 562 22478999999
No 155
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=50.28 E-value=15 Score=31.91 Aligned_cols=39 Identities=26% Similarity=0.351 Sum_probs=30.2
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+..+++++++++|..|.+ . .+++..++|+. ..||.||+|
T Consensus 70 ~~~~v~~~~~~~v~~i~~--~--~~~v~~~~g~~-~~~d~lviA 108 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDP--Q--AHTVALSDGRT-LPYGTLVLA 108 (408)
T ss_dssp TSCSCEEEETCCEEEEET--T--TTEEEETTSCE-EECSEEEEC
T ss_pred HHCCCEEEcCCEEEEEEC--C--CCEEEECCCCE-EECCEEEEC
Confidence 345688999999999974 3 46777777754 379999999
No 156
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=50.16 E-value=36 Score=27.66 Aligned_cols=40 Identities=10% Similarity=-0.049 Sum_probs=27.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCe-EEEeCC----Cc-ccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLW-SVSGLD----GQ-SLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~----G~-~~~~~d~VVlA 130 (235)
.+++++++++|.+|.. ++++. .+...+ |+ ....+|.||++
T Consensus 197 ~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a 242 (320)
T 1trb_A 197 GNIILHTNRTLEEVTG--DQMGVTGVRLRDTQNSDNIESLDVAGLFVA 242 (320)
T ss_dssp SSEEEECSCEEEEEEE--CSSSEEEEEEECCTTCCCCEEEECSEEEEC
T ss_pred CCeEEEcCceeEEEEc--CCCceEEEEEEeccCCCceEEEEcCEEEEE
Confidence 5788999999999986 44332 243332 42 23478999999
No 157
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=49.45 E-value=30 Score=30.97 Aligned_cols=39 Identities=8% Similarity=-0.140 Sum_probs=29.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCe--EEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLW--SVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w--~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+++++++ +|++|+. +++++ .|.+.+|+. ..+|.||.|+
T Consensus 189 ~Gv~i~~~-~v~~i~~--~~~g~~~~v~~~~g~~-i~ad~vV~Ad 229 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIIN--NQHGDIEKLITKQNGE-ISGQLFIDCT 229 (526)
T ss_dssp SCCEEEEC-CEEEEEE--CTTSCEEEEEESSSCE-EECSEEEECS
T ss_pred CCCEEEEe-EEEEEEe--cCCCcEEEEEECCCCE-EEcCEEEECC
Confidence 57889999 5999986 54554 566777654 4789999993
No 158
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=48.85 E-value=21 Score=29.11 Aligned_cols=49 Identities=18% Similarity=0.039 Sum_probs=31.1
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCCCe---EEEe-----C--C---Cc-ccccccEEEec
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLW---SVSG-----L--D---GQ-SLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w---~l~~-----~--~---G~-~~~~~d~VVlA 130 (235)
.|.+.+.+..+++++++++|.+|.. ++++. .+.. + + |+ ....+|.||+|
T Consensus 124 ~l~~~~~~~~gv~i~~~~~V~~i~~--~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 124 TIMSKLLARPNVKLFNAVAAEDLIV--KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp HHHHHHHTSTTEEEEETEEEEEEEE--ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred HHHHHHHhcCCCEEEcCcEEEEEEe--cCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 4555555545788999999999986 44433 3321 1 2 21 22368999999
No 159
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=48.79 E-value=18 Score=32.68 Aligned_cols=46 Identities=20% Similarity=0.239 Sum_probs=32.8
Q ss_pred HHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeC-CCc-ccccccEEEec
Q 026682 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGL-DGQ-SLGQFNGVVAS 130 (235)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~G~-~~~~~d~VVlA 130 (235)
+.+++..+++++++++|.+|.+ .++.+.+... +|. ....||.||+|
T Consensus 65 ~~~~~~~~i~~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviA 112 (565)
T 3ntd_A 65 ESFKARFNVEVRVKHEVVAIDR--AAKLVTVRRLLDGSEYQESYDTLLLS 112 (565)
T ss_dssp HHHHHHHCCEEETTEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHhcCcEEEECCEEEEEEC--CCCEEEEEecCCCCeEEEECCEEEEC
Confidence 3444434678999999999986 6777887652 343 12479999999
No 160
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=48.78 E-value=22 Score=31.51 Aligned_cols=41 Identities=17% Similarity=0.098 Sum_probs=28.9
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+|.. +++.+.+..+++ . ..+|.||++.
T Consensus 238 ~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~~-~-i~~D~vi~a~ 278 (480)
T 3cgb_A 238 DKHHIEILTNENVKAFKG--NERVEAVETDKG-T-YKADLVLVSV 278 (480)
T ss_dssp HHTTCEEECSCCEEEEEE--SSBEEEEEETTE-E-EECSEEEECS
T ss_pred HHcCcEEEcCCEEEEEEc--CCcEEEEEECCC-E-EEcCEEEECc
Confidence 345789999999999985 433344555443 3 3789999993
No 161
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=48.72 E-value=23 Score=32.40 Aligned_cols=40 Identities=10% Similarity=-0.007 Sum_probs=28.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCC-eEEEeC---CCcc-cccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQS-LGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~-w~l~~~---~G~~-~~~~d~VVlA 130 (235)
.|.+|+.+++|++|.+ ++++ |.+... +|+. ...+|.||+|
T Consensus 201 ~Ga~i~~~t~V~~l~~--~~~~v~gV~~~d~~tg~~~~i~A~~VV~A 245 (571)
T 2rgh_A 201 DGAYLVSKMKAVGFLY--EGDQIVGVKARDLLTDEVIEIKAKLVINT 245 (571)
T ss_dssp TTCEEESSEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEBSCEEEC
T ss_pred cCCeEEeccEEEEEEE--eCCEEEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 5789999999999987 4443 555532 3431 2368999999
No 162
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=48.64 E-value=20 Score=31.27 Aligned_cols=47 Identities=17% Similarity=0.077 Sum_probs=31.3
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
..+..++..+++++++++|.+|+. +++.+.+..+ |+. ..+|.||+|.
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~~-~~~-i~~d~vi~a~ 242 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEG--DGRVQKVVTD-KNA-YDADLVVVAV 242 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEEES-SCE-EECSEEEECS
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEEC-CCE-EECCEEEECc
Confidence 333334446789999999999985 4333456553 433 3689999993
No 163
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=48.63 E-value=20 Score=32.79 Aligned_cols=39 Identities=21% Similarity=0.090 Sum_probs=31.9
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.++++++++.|..++. .+++..+...++... .+|.|++|
T Consensus 276 ~gi~~~~~~~v~~~~~--~~~~~~v~~~~~~~~-~~D~vLvA 314 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTK--MDDKILVEFSDKTSE-LYDTVLYA 314 (542)
T ss_dssp TTCEEEETCCEEEEEE--ETTEEEEEETTSCEE-EESEEEEC
T ss_pred hcceeecceEEEEEEe--cCCeEEEEEcCCCeE-EEEEEEEc
Confidence 4788999999999987 677788887777543 68999998
No 164
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=48.46 E-value=18 Score=33.02 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=29.6
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
++..+++++++++|.+|+. ++++ +...+|+. ..+|.||+|
T Consensus 238 l~~~GV~i~~~~~v~~i~~--~~~~--v~~~~g~~-i~~D~Vi~a 277 (588)
T 3ics_A 238 MKNHDVELVFEDGVDALEE--NGAV--VRLKSGSV-IQTDMLILA 277 (588)
T ss_dssp HHHTTCEEECSCCEEEEEG--GGTE--EEETTSCE-EECSEEEEC
T ss_pred HHHcCCEEEECCeEEEEec--CCCE--EEECCCCE-EEcCEEEEc
Confidence 3346789999999999985 4343 55567754 379999998
No 165
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=47.97 E-value=21 Score=31.42 Aligned_cols=47 Identities=9% Similarity=0.085 Sum_probs=29.2
Q ss_pred HHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEe-CCCc-ccccccEEEec
Q 026682 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~G~-~~~~~d~VVlA 130 (235)
.+.+++..+++++++++|..|.+ .++.+.+.. .+|+ ....||.||+|
T Consensus 72 ~~~~~~~~gi~~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviA 120 (472)
T 3iwa_A 72 PEFFRINKDVEALVETRAHAIDR--AAHTVEIENLRTGERRTLKYDKLVLA 120 (472)
T ss_dssp ---------CEEECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHhhhcCcEEEECCEEEEEEC--CCCEEEEeecCCCCEEEEECCEEEEe
Confidence 34445445678899999999986 677788765 2353 12479999998
No 166
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=47.67 E-value=20 Score=31.63 Aligned_cols=44 Identities=14% Similarity=0.109 Sum_probs=29.6
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeC-----CCcccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL-----DGQSLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-----~G~~~~~~d~VVlA~ 131 (235)
+..+++++++++|.+|....+++.+.+... +|+. ..+|.||+|.
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~ 283 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQEN-LEAEVLLVAV 283 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE-EEESEEEECS
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceE-EECCEEEECC
Confidence 345789999999999974102345666554 2333 3799999983
No 167
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=47.22 E-value=14 Score=32.63 Aligned_cols=50 Identities=24% Similarity=0.153 Sum_probs=35.0
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCC-CCeEEEeC--CCc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDK-NLWSVSGL--DGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~-~~w~l~~~--~G~-~~~~~d~VVlA 130 (235)
..+.+.+.+.+.++++++++|.+++. .+ ++..+... +|+ ....+|.||++
T Consensus 214 ~~~~~~l~~~l~v~i~~~~~v~~i~~--~~~~~v~v~~~~~~G~~~~i~~D~vi~a 267 (466)
T 3l8k_A 214 QDIVNTLLSILKLNIKFNSPVTEVKK--IKDDEYEVIYSTKDGSKKSIFTNSVVLA 267 (466)
T ss_dssp HHHHHHHHHHHCCCEECSCCEEEEEE--EETTEEEEEECCTTSCCEEEEESCEEEC
T ss_pred HHHHHHHHhcCEEEEEECCEEEEEEE--cCCCcEEEEEEecCCceEEEEcCEEEEC
Confidence 34555555544478999999999986 44 66777766 564 12478999998
No 168
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=46.77 E-value=15 Score=31.87 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=29.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++++++++|..|.+ . .+.+...+|+.+ .||.||+|
T Consensus 70 ~~i~~~~~~~v~~id~--~--~~~v~~~~g~~~-~~d~lvlA 106 (410)
T 3ef6_A 70 ARIDMLTGPEVTALDV--Q--TRTISLDDGTTL-SADAIVIA 106 (410)
T ss_dssp TTCEEEESCCEEEEET--T--TTEEEETTSCEE-ECSEEEEC
T ss_pred CCCEEEeCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEEc
Confidence 4678999999999975 3 356777777653 69999999
No 169
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=46.32 E-value=33 Score=27.60 Aligned_cols=42 Identities=14% Similarity=0.296 Sum_probs=28.6
Q ss_pred HHhcCCCCeeEcCeeEEEEEeecCC--CCeEEEeCCCcccccccEEEec
Q 026682 84 ALCHQPGVESKFGVGVGRFEWLEDK--NLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~--~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..++..+++++++ +|..+ + ++ +.|.+....+. ...||.||+|
T Consensus 70 ~~~~~~~v~~~~~-~v~~i-~--~~~~~~~~v~~~~~~-~~~~d~lvlA 113 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQI-L--KNSDGSFTIKLEGGK-TELAKAVIVC 113 (315)
T ss_dssp HHHTTTCCEEECC-CEEEE-E--ECTTSCEEEEETTSC-EEEEEEEEEC
T ss_pred HHHHHcCcEEEEE-EEEEE-e--cCCCCcEEEEEecCC-EEEeCEEEEe
Confidence 3444567888888 89999 6 45 78994222222 3479999999
No 170
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=45.85 E-value=56 Score=26.31 Aligned_cols=49 Identities=10% Similarity=0.110 Sum_probs=32.3
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCCC---eEEEe-CCCc-ccccccEEEec
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~---w~l~~-~~G~-~~~~~d~VVlA 130 (235)
.+.+.|.+..+++++++++|.+|.. ++++ ..+.+ .+|+ ....+|.||++
T Consensus 184 ~~~~~l~~~~gv~v~~~~~v~~i~~--~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 237 (310)
T 1fl2_A 184 VLQDKLRSLKNVDIILNAQTTEVKG--DGSKVVGLEYRDRVSGDIHNIELAGIFVQ 237 (310)
T ss_dssp HHHHHHHTCTTEEEESSEEEEEEEE--SSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHhhCCCeEEecCCceEEEEc--CCCcEEEEEEEECCCCcEEEEEcCEEEEe
Confidence 3455565545788999999999985 4443 33433 2353 23478999999
No 171
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=45.13 E-value=31 Score=30.02 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=33.5
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVlA 130 (235)
..+.+.+.+..+++++++++|.+++ .++..+...+|. ....||.||++
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~----~~~~~~~~~~g~~~~i~~d~vi~~ 251 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIE----PDKVIYEDLNGNTHEVPAKFTMFM 251 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEC----SSEEEEECTTSCEEEEECSEEEEE
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEe----CCceEEEeeCCCceEeecceEEEe
Confidence 3445555555689999999999996 345666665553 22479999998
No 172
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=44.88 E-value=17 Score=32.64 Aligned_cols=49 Identities=10% Similarity=0.152 Sum_probs=32.5
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEE--EeCCCcc---cccccEEEec
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSV--SGLDGQS---LGQFNGVVAS 130 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l--~~~~G~~---~~~~d~VVlA 130 (235)
++..++...+..|++|+++++|.+++. ++..+ ..++|.. ...+|.||.|
T Consensus 274 ~~~~~~~~L~~~GV~v~~~~~v~~v~~----~~~~~~~~~~dg~~~~~~i~ad~viwa 327 (502)
T 4g6h_A 274 LSSYAQSHLENTSIKVHLRTAVAKVEE----KQLLAKTKHEDGKITEETIPYGTLIWA 327 (502)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEECS----SEEEEEEECTTSCEEEEEEECSEEEEC
T ss_pred HHHHHHHHHHhcceeeecCceEEEEeC----CceEEEEEecCcccceeeeccCEEEEc
Confidence 444455555557899999999999963 33433 3456642 2368999988
No 173
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=44.67 E-value=14 Score=32.90 Aligned_cols=41 Identities=7% Similarity=0.144 Sum_probs=29.6
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEE-eCCCcccccccEEEecC
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVS-GLDGQSLGQFNGVVASD 131 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~-~~~G~~~~~~d~VVlA~ 131 (235)
..+++++++++|..|.+ +++.+.+. ..++.. ..||.||+|.
T Consensus 104 ~~gv~v~~~~~v~~i~~--~~~~v~v~~~g~~~~-~~~d~lviAt 145 (490)
T 2bc0_A 104 SLGAKVYMESPVQSIDY--DAKTVTALVDGKNHV-ETYDKLIFAT 145 (490)
T ss_dssp HTTCEEETTCCEEEEET--TTTEEEEEETTEEEE-EECSEEEECC
T ss_pred hCCCEEEeCCEEEEEEC--CCCEEEEEeCCcEEE-EECCEEEECC
Confidence 35678999999999986 66677775 322223 4799999983
No 174
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=44.61 E-value=41 Score=27.20 Aligned_cols=50 Identities=12% Similarity=-0.131 Sum_probs=33.4
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCe-EEEeC---CCc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGL---DGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~---~G~-~~~~~d~VVlA 130 (235)
..+.+.|.+..+++++++++|.+|.. ++++. .+... +|+ ....+|.||++
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~--~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 236 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKG--DASGVSSLSIKNTATNEKRELVVPGFFIF 236 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEE--ETTEEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEEC--CCCcEeEEEEEecCCCceEEEecCEEEEE
Confidence 34666776556788999999999985 33332 33333 564 22479999999
No 175
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=44.54 E-value=18 Score=32.95 Aligned_cols=50 Identities=14% Similarity=0.066 Sum_probs=32.7
Q ss_pred hHHHHHHhc---CCCCeeEcCeeEEEEEeecCCCC-eEEEeC---CCc-ccccccEEEec
Q 026682 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~---~G~-~~~~~d~VVlA 130 (235)
..++..|++ ..|.+|+++++|++|.. ++++ |.+... +|+ ....+|.||+|
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~--~~g~v~gV~~~d~~tg~~~~i~A~~VV~A 227 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIY--DQGKVVGVVAKDRLTDTTHTIYAKKVVNA 227 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCeEEEEEEEEcCCCceEEEECCEEEEC
Confidence 345554443 35789999999999987 4544 445543 342 22368999998
No 176
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=44.39 E-value=33 Score=30.41 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=30.2
Q ss_pred HHHHhcCCCCeeEcCeeEEEEEeecCCCCe-EEEeCCCcccccccEEEecC
Q 026682 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+..++..+++++++++|.+|+. + ++. .+.. +|+. ..+|.||++.
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~--~-~~v~~v~~-~g~~-i~~D~Vi~a~ 287 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG--N-GKVEKIIT-DKNE-YDVDMVILAV 287 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC--S-SSCCEEEE-SSCE-EECSEEEECC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc--C-CcEEEEEE-CCcE-EECCEEEECC
Confidence 33334446899999999999984 3 333 3444 5544 3799999993
No 177
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=43.75 E-value=21 Score=31.20 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=29.0
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+++++++++|..|.+ .+ ..|..++|+. ..||.||+|.
T Consensus 73 ~gv~~~~~~~v~~i~~--~~--~~v~~~~g~~-~~~d~lviAt 110 (431)
T 1q1r_A 73 QNIQLLGGTQVTAINR--DR--QQVILSDGRA-LDYDRLVLAT 110 (431)
T ss_dssp TTEEEECSCCEEEEET--TT--TEEEETTSCE-EECSEEEECC
T ss_pred CCCEEEeCCEEEEEEC--CC--CEEEECCCCE-EECCEEEEcC
Confidence 5678999999999985 33 3676677754 3799999983
No 178
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=43.70 E-value=25 Score=28.75 Aligned_cols=40 Identities=8% Similarity=-0.001 Sum_probs=29.1
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+..++++++ ++|..+.. .++.|.+.. +|.. ..||.||+|.
T Consensus 83 ~~~~v~~~~-~~v~~i~~--~~~~~~v~~-~~~~-~~~~~li~At 122 (319)
T 3cty_A 83 ANYAKIREG-VEVRSIKK--TQGGFDIET-NDDT-YHAKYVIITT 122 (319)
T ss_dssp HTTSEEEET-CCEEEEEE--ETTEEEEEE-SSSE-EEEEEEEECC
T ss_pred HHcCCEEEE-eeEEEEEE--eCCEEEEEE-CCCE-EEeCEEEECC
Confidence 345677777 78999986 566788877 4433 3699999993
No 179
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=42.40 E-value=35 Score=27.98 Aligned_cols=41 Identities=12% Similarity=0.016 Sum_probs=28.0
Q ss_pred CCCCeeEcCeeEEEEEeecCCCCeEEEeC---CCc-ccccccEEEec
Q 026682 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQ-SLGQFNGVVAS 130 (235)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~G~-~~~~~d~VVlA 130 (235)
..++++++++.|.+|.. +++.-.+... +|+ ....+|.||++
T Consensus 203 ~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a 247 (335)
T 2zbw_A 203 EGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLIL 247 (335)
T ss_dssp TTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred cCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEe
Confidence 34789999999999985 4332234333 563 22479999999
No 180
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=42.28 E-value=24 Score=28.70 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=25.6
Q ss_pred CchHHHHHHhcCCCCeeEcCeeEEEEEeec---CCCCeEEEeCCCcc
Q 026682 77 GMNSICKALCHQPGVESKFGVGVGRFEWLE---DKNLWSVSGLDGQS 120 (235)
Q Consensus 77 GM~~l~~~La~~l~~~i~~~~~V~~i~~~~---~~~~w~l~~~~G~~ 120 (235)
||++|+..+.+..| .+|.++++.. .+.-|+|+.+||+.
T Consensus 1 g~~~v~a~~~~l~G------~~v~~v~~~g~G~~~~vyrv~l~DG~~ 41 (288)
T 3f7w_A 1 GVNSVAARVTELTG------REVAAVAERGHSHRWHLYRVELADGTP 41 (288)
T ss_dssp CCHHHHHHHHHHHC------CCEEEEEEEEEETTEEEEEEEETTSCE
T ss_pred ChHHHHHHHHHhcC------CCeEEEEecCCCCCeEEEEEEECCCCE
Confidence 89999999998545 4555555411 22348898888853
No 181
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=42.13 E-value=12 Score=31.93 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=27.4
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++++++++|..|.+ . .+.|. .+|+. ..||.||+|
T Consensus 73 ~~v~~~~g~~v~~id~--~--~~~V~-~~g~~-~~~d~lViA 108 (367)
T 1xhc_A 73 RGIEIRLAEEAKLIDR--G--RKVVI-TEKGE-VPYDTLVLA 108 (367)
T ss_dssp HTEEEECSCCEEEEET--T--TTEEE-ESSCE-EECSEEEEC
T ss_pred CCcEEEECCEEEEEEC--C--CCEEE-ECCcE-EECCEEEEC
Confidence 4677899999999974 3 46776 56654 379999999
No 182
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=41.78 E-value=20 Score=31.44 Aligned_cols=41 Identities=7% Similarity=0.122 Sum_probs=29.6
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
.+.+++++++|.+|.+ .++.|.+...++.....||.||+|.
T Consensus 71 ~gi~~~~~~~V~~id~--~~~~v~v~~~~~~~~~~~d~lviAt 111 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDV--ENQLIAWTRKEEQQWYSYDKLILAT 111 (452)
T ss_dssp TTEEEECSCEEEEEET--TTTEEEEEETTEEEEEECSEEEECC
T ss_pred CCCEEEECCEEEEEEC--CCCEEEEEecCceEEEEcCEEEECC
Confidence 5677899999999986 6777877522222224699999983
No 183
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=40.61 E-value=18 Score=31.29 Aligned_cols=37 Identities=22% Similarity=0.308 Sum_probs=29.0
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++++++++|..|.+ . .+.+..++|..+ .||.||+|
T Consensus 78 ~~i~~~~~~~v~~id~--~--~~~v~~~~g~~~-~~d~lvlA 114 (415)
T 3lxd_A 78 KAVEMKLGAEVVSLDP--A--AHTVKLGDGSAI-EYGKLIWA 114 (415)
T ss_dssp TTEEEEETCCEEEEET--T--TTEEEETTSCEE-EEEEEEEC
T ss_pred CCcEEEeCCEEEEEEC--C--CCEEEECCCCEE-EeeEEEEc
Confidence 5678999999999975 3 456777777653 79999999
No 184
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=40.55 E-value=69 Score=25.88 Aligned_cols=50 Identities=4% Similarity=-0.008 Sum_probs=32.1
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC---Cc-ccccccEEEec
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVAS 130 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---G~-~~~~~d~VVlA 130 (235)
+....+.|.+ .+++++++++|.+|.. +++...+...+ |+ ....+|.||++
T Consensus 192 ~~~~~~~l~~-~gv~~~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a 245 (332)
T 3lzw_A 192 HEHSVENLHA-SKVNVLTPFVPAELIG--EDKIEQLVLEEVKGDRKEILEIDDLIVN 245 (332)
T ss_dssp CHHHHHHHHH-SSCEEETTEEEEEEEC--SSSCCEEEEEETTSCCEEEEECSEEEEC
T ss_pred cHHHHHHHhc-CCeEEEeCceeeEEec--CCceEEEEEEecCCCceEEEECCEEEEe
Confidence 3444455544 5789999999999985 44444444332 22 22469999999
No 185
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=40.06 E-value=41 Score=29.07 Aligned_cols=47 Identities=11% Similarity=0.007 Sum_probs=30.7
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC--CcccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD--GQSLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~--G~~~~~~d~VVlA 130 (235)
....+...+..+++++++++|.+|+. ++..+...+ |+. ..||.||++
T Consensus 203 ~~~l~~~l~~~GV~i~~~~~v~~v~~----~~v~~~~~~~~g~~-i~~D~vv~a 251 (430)
T 3h28_A 203 KRLVEDLFAERNIDWIANVAVKAIEP----DKVIYEDLNGNTHE-VPAKFTMFM 251 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS----SEEEEECTTSCEEE-EECSEEEEE
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeC----CeEEEEecCCCceE-EeeeEEEEC
Confidence 33333344446899999999999963 345555422 333 479999987
No 186
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=39.71 E-value=73 Score=25.93 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=33.3
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCC--C---eEEEeC-CCc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKN--L---WSVSGL-DGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~--~---w~l~~~-~G~-~~~~~d~VVlA 130 (235)
..+.+.+.+..+++++++++|.+|.. +++ + ..+... +|+ ....+|.||++
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~--~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 254 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYG--DGERDVLGGLKVKNVVTGDVSDLKVSGLFFA 254 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeC--CCCccceeeEEEEecCCCceEEEecCEEEEE
Confidence 34555665556788999999999985 443 3 444432 453 23479999999
No 187
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=39.18 E-value=37 Score=30.05 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=29.3
Q ss_pred cCCCCeeEcCeeEEEEEeecCCCCeEEEeCC---Ccc-cccccEEEec
Q 026682 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQS-LGQFNGVVAS 130 (235)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---G~~-~~~~d~VVlA 130 (235)
+..+++++++++|.+|+. .+++...+...+ |+. ...+|.||++
T Consensus 236 ~~~gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~~~~D~vi~a 282 (488)
T 3dgz_A 236 ESHGTQFLKGCVPSHIKK-LPTNQLQVTWEDHASGKEDTGTFDTVLWA 282 (488)
T ss_dssp HHTTCEEEETEEEEEEEE-CTTSCEEEEEEETTTTEEEEEEESEEEEC
T ss_pred HHCCCEEEeCCEEEEEEE-cCCCcEEEEEEeCCCCeeEEEECCEEEEc
Confidence 345789999999999985 133446665433 442 2368999998
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.06 E-value=31 Score=30.30 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=28.1
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCc-ccccccEEEecC
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVASD 131 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVlA~ 131 (235)
.+++++++++|.+|+ . +++.+...+|+ ....+|.||+|.
T Consensus 225 ~gv~i~~~~~v~~i~---~-~~v~v~~~~G~~~~i~~D~vv~a~ 264 (458)
T 1lvl_A 225 LGIALHLGHSVEGYE---N-GCLLANDGKGGQLRLEADRVLVAV 264 (458)
T ss_dssp HTCEEETTCEEEEEE---T-TEEEEECSSSCCCEECCSCEEECC
T ss_pred CCCEEEECCEEEEEE---e-CCEEEEECCCceEEEECCEEEECc
Confidence 478999999999997 3 33666644562 224799999983
No 189
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=38.34 E-value=43 Score=27.59 Aligned_cols=49 Identities=12% Similarity=0.016 Sum_probs=32.2
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCC--CeEEEe-CCCc-ccccccEEEec
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKN--LWSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~--~w~l~~-~~G~-~~~~~d~VVlA 130 (235)
.+.+.+.+..+++++++++|.+|.. +++ +..+.. .+|+ ....+|.||++
T Consensus 195 ~~~~~~~~~~gV~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a 247 (335)
T 2a87_A 195 IMLDRARNNDKIRFLTNHTVVAVDG--DTTVTGLRVRDTNTGAETTLPVTGVFVA 247 (335)
T ss_dssp THHHHHHHCTTEEEECSEEEEEEEC--SSSCCEEEEEEETTSCCEEECCSCEEEC
T ss_pred HHHHHHhccCCcEEEeCceeEEEec--CCcEeEEEEEEcCCCceEEeecCEEEEc
Confidence 3454555556788999999999985 332 244543 2442 23479999999
No 190
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=38.18 E-value=40 Score=31.61 Aligned_cols=48 Identities=17% Similarity=-0.047 Sum_probs=31.9
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCCCe-EEEeCCCcccccccEEEecC
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~G~~~~~~d~VVlA~ 131 (235)
.|.+.+.+..+++| ++++|+.|.. +++++ .|.+.+|.. -.+|.||+|+
T Consensus 128 ~L~~~Le~~~GVeI-~~~~Vt~L~~--e~g~V~GV~t~dG~~-i~AdaVVLAT 176 (637)
T 2zxi_A 128 YMKKVCENQENLYI-KQEEVVDIIV--KNNQVVGVRTNLGVE-YKTKAVVVTT 176 (637)
T ss_dssp HHHHHHHTCTTEEE-EESCEEEEEE--SSSBEEEEEETTSCE-EECSEEEECC
T ss_pred HHHHHHHhCCCCEE-EEeEEEEEEe--cCCEEEEEEECCCcE-EEeCEEEEcc
Confidence 34444443246677 5789999975 55554 577777854 3689999993
No 191
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=37.01 E-value=20 Score=31.83 Aligned_cols=47 Identities=11% Similarity=-0.020 Sum_probs=30.2
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCe---EEEeCCCcccccccEEEecC
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLW---SVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w---~l~~~~G~~~~~~d~VVlA~ 131 (235)
..|.+.+ +..+++++.+++| .|.. +++.. .+.+.+|+. .+|.||+|.
T Consensus 123 ~~L~~~~-~~~gv~i~~~~~v-~l~~--~~~~v~Gv~v~~~~g~~--~a~~VVlAt 172 (472)
T 2e5v_A 123 NFLLKLA-REEGIPIIEDRLV-EIRV--KDGKVTGFVTEKRGLVE--DVDKLVLAT 172 (472)
T ss_dssp HHHHHHH-HHTTCCEECCCEE-EEEE--ETTEEEEEEETTTEEEC--CCSEEEECC
T ss_pred HHHHHHH-HhCCCEEEECcEE-EEEE--eCCEEEEEEEEeCCCeE--EeeeEEECC
Confidence 4444444 3457889999999 9975 44433 343334432 589999994
No 192
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=36.40 E-value=19 Score=32.14 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=28.8
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+++++++++|.+|.+ . .++|..++|+.+ .||.||+|
T Consensus 103 ~gv~~~~g~~v~~id~--~--~~~V~~~~g~~i-~yd~lviA 139 (493)
T 1m6i_A 103 GGVAVLTGKKVVQLDV--R--DNMVKLNDGSQI-TYEKCLIA 139 (493)
T ss_dssp CEEEEEETCCEEEEEG--G--GTEEEETTSCEE-EEEEEEEC
T ss_pred CCeEEEcCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEEC
Confidence 4578899999999975 3 356777788653 69999998
No 193
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=35.63 E-value=31 Score=30.06 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=25.2
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.++++..+ +|++|.+ +++ +|.+++|+.+ .||.||+|
T Consensus 69 ~gv~~i~~-~v~~Id~--~~~--~V~~~~g~~i-~YD~LViA 104 (430)
T 3hyw_A 69 FNIEFINE-KAESIDP--DAN--TVTTQSGKKI-EYDYLVIA 104 (430)
T ss_dssp GTEEEECS-CEEEEET--TTT--EEEETTCCEE-ECSEEEEC
T ss_pred CCcEEEEe-EEEEEEC--CCC--EEEECCCCEE-ECCEEEEe
Confidence 34555555 7888875 444 4666788654 79999999
No 194
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=35.47 E-value=45 Score=29.03 Aligned_cols=40 Identities=13% Similarity=0.255 Sum_probs=29.7
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEe-CCCcc-cccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQS-LGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~G~~-~~~~d~VVlA 130 (235)
.++++++++.|..|.. +++.+.+.. .+|+. ...||.||+|
T Consensus 69 ~gv~~~~~~~v~~i~~--~~~~v~~~~~~~g~~~~~~~d~lviA 110 (447)
T 1nhp_A 69 RGVNVFSNTEITAIQP--KEHQVTVKDLVSGEERVENYDKLIIS 110 (447)
T ss_dssp TTCEEEETEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEEC
T ss_pred CCCEEEECCEEEEEeC--CCCEEEEEecCCCceEEEeCCEEEEc
Confidence 4678999999999986 666677765 34542 2369999998
No 195
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=34.92 E-value=1e+02 Score=24.85 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=31.7
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCC---CeEEEe-CCCc-ccccccEEEec
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKN---LWSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~---~w~l~~-~~G~-~~~~~d~VVlA 130 (235)
.+.+.|.+ .+++++++++|.+|.. +++ +..+.. .+|+ ....+|.||++
T Consensus 195 ~l~~~l~~-~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 195 AYVQEIKK-RNIPYIMNAQVTEIVG--DGKKVTGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp HHHHHHHH-TTCCEECSEEEEEEEE--SSSSEEEEEEEETTTCCEEEECCSEEEEC
T ss_pred HHHHHHhc-CCcEEEcCCeEEEEec--CCceEEEEEEEEcCCCceEEEecCEEEEe
Confidence 35555553 4788999999999985 443 234432 2564 23479999999
No 196
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=34.37 E-value=39 Score=26.88 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.5
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
++..+++++. ++|.+|.. + + .+...+|+. ..+|.||++
T Consensus 184 l~~~gv~i~~-~~v~~i~~--~-~--~v~~~~g~~-~~~D~vi~a 221 (297)
T 3fbs_A 184 LAARGVRVET-TRIREIAG--H-A--DVVLADGRS-IALAGLFTQ 221 (297)
T ss_dssp HHHTTCEEEC-SCEEEEET--T-E--EEEETTSCE-EEESEEEEC
T ss_pred HHHCCcEEEc-ceeeeeec--C-C--eEEeCCCCE-EEEEEEEEc
Confidence 3345778885 89999873 2 2 677778865 379999999
No 197
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=33.51 E-value=72 Score=25.83 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=25.2
Q ss_pred eEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 93 SKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 93 i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
..+...+..+.. ..++.+++.+.+|+.+ .||+||||
T Consensus 77 ~~~~~~~~~~~~-~~~~~~~v~~~~g~~~-~a~~liiA 112 (304)
T 4fk1_A 77 HYYEKTVVMITK-QSTGLFEIVTKDHTKY-LAERVLLA 112 (304)
T ss_dssp EEEECCEEEEEE-CTTSCEEEEETTCCEE-EEEEEEEC
T ss_pred EEEeeEEEEeee-cCCCcEEEEECCCCEE-EeCEEEEc
Confidence 344455666654 2556788988888764 68999999
No 198
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=33.48 E-value=50 Score=28.85 Aligned_cols=46 Identities=9% Similarity=0.145 Sum_probs=32.0
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+....+...+..+++++++++|.+++. + .+...+|+.+ .+|.||++
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~~----~--~v~~~~g~~~-~~D~vl~a 235 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAING----N--EITFKSGKVE-HYDMIIEG 235 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEET----T--EEEETTSCEE-ECSEEEEC
T ss_pred hHHHHHHHhhccceEEEeccEEEEecC----C--eeeecCCeEE-eeeeEEEE
Confidence 344444444446789999999998862 2 3566777653 79999998
No 199
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=33.24 E-value=28 Score=32.51 Aligned_cols=44 Identities=18% Similarity=0.041 Sum_probs=29.3
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeC---CCcccccccEEEec
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQSLGQFNGVVAS 130 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~G~~~~~~d~VVlA 130 (235)
+.+.|. ..+++++++++|.+|+. + +-.+... +++. ..+|.||+|
T Consensus 573 l~~~l~-~~GV~i~~~~~V~~i~~--~--~~~v~~~~~~~~~~-i~aD~VV~A 619 (690)
T 3k30_A 573 IQRRLI-ENGVARVTDHAVVAVGA--G--GVTVRDTYASIERE-LECDAVVMV 619 (690)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEET--T--EEEEEETTTCCEEE-EECSEEEEE
T ss_pred HHHHHH-HCCCEEEcCcEEEEEEC--C--eEEEEEccCCeEEE-EECCEEEEC
Confidence 344444 46899999999999973 2 3444432 3333 469999999
No 200
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=33.13 E-value=86 Score=25.95 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=27.7
Q ss_pred CCCeeEcCeeEEEEEeecCCC---CeEEEeCCCc-ccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKN---LWSVSGLDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~---~w~l~~~~G~-~~~~~d~VVlA 130 (235)
.+++++++++|.+|.. +++ +..+...+|+ ....+|.||++
T Consensus 215 ~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~~g~~~~i~~D~vi~a 258 (360)
T 3ab1_A 215 GTIDVYLETEVASIEE--SNGVLTRVHLRSSDGSKWTVEADRLLIL 258 (360)
T ss_dssp TSEEEESSEEEEEEEE--ETTEEEEEEEEETTCCEEEEECSEEEEC
T ss_pred CceEEEcCcCHHHhcc--CCCceEEEEEEecCCCeEEEeCCEEEEC
Confidence 3578999999999986 434 3344434663 23479999998
No 201
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=30.98 E-value=52 Score=30.90 Aligned_cols=47 Identities=19% Similarity=0.127 Sum_probs=31.1
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCCC-eEEEeCCCcccccccEEEecC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~G~~~~~~d~VVlA~ 131 (235)
|.+.+.+..+++| ++++|..|.. +++. +.|.+.+|.. ..+|.||+|+
T Consensus 130 L~e~Le~~~GV~I-~~~~V~~L~~--e~g~V~GV~t~dG~~-I~Ad~VVLAT 177 (651)
T 3ces_A 130 VRTALENQPNLMI-FQQAVEDLIV--ENDRVVGAVTQMGLK-FRAKAVVLTV 177 (651)
T ss_dssp HHHHHHTCTTEEE-EECCEEEEEE--SSSBEEEEEETTSEE-EEEEEEEECC
T ss_pred HHHHHHhCCCCEE-EEEEEEEEEe--cCCEEEEEEECCCCE-EECCEEEEcC
Confidence 3334433246777 6789999975 4444 4677777754 3689999993
No 202
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=30.61 E-value=71 Score=29.48 Aligned_cols=48 Identities=21% Similarity=0.101 Sum_probs=31.9
Q ss_pred HHHHHhcCCCC--eeEcCeeEEEEEeecCC----CCeEEEeC------CCc-ccccccEEEecC
Q 026682 81 ICKALCHQPGV--ESKFGVGVGRFEWLEDK----NLWSVSGL------DGQ-SLGQFNGVVASD 131 (235)
Q Consensus 81 l~~~La~~l~~--~i~~~~~V~~i~~~~~~----~~w~l~~~------~G~-~~~~~d~VVlA~ 131 (235)
|.+.+.+ .+. +|+++++|++|+. ++ .++.++.. +|+ ....+|.||.|+
T Consensus 147 L~~~a~~-~g~~v~v~~~~~v~~l~~--~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgAD 207 (639)
T 2dkh_A 147 YLERMRN-SPSRLEPHYARRVLDVKV--DHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCD 207 (639)
T ss_dssp HHHHHHH-STTCCCCBCSEEEEEEEE--CTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECC
T ss_pred HHHHHHh-CCCCcEEecCCEEEEEEE--CCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECC
Confidence 3444443 444 8999999999986 43 25877654 452 224689999994
No 203
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=30.52 E-value=54 Score=28.42 Aligned_cols=49 Identities=16% Similarity=0.049 Sum_probs=31.3
Q ss_pred chHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEe--CCCc----ccccccEEEec
Q 026682 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG--LDGQ----SLGQFNGVVAS 130 (235)
Q Consensus 78 M~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~--~~G~----~~~~~d~VVlA 130 (235)
+....+...+..+++++++++|.+|+. ++..+.. ++|+ ....||.||++
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~----~~v~~~~~~~~g~~~~~~~i~~D~vv~~ 264 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVED----NKMYVTQVDEKGETIKEMVLPVKFGMMI 264 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEET----TEEEEEEECTTSCEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEC----CeEEEEecccCCccccceEEEEeEEEEc
Confidence 344444444456899999999999973 3455543 3431 22478999987
No 204
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=30.41 E-value=92 Score=28.37 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=32.4
Q ss_pred HHHHHHhc---CCCCeeEcCeeEEEEEeecCCCC-eE-EEeC------CCc--------ccccccEEEecC
Q 026682 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WS-VSGL------DGQ--------SLGQFNGVVASD 131 (235)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~-w~-l~~~------~G~--------~~~~~d~VVlA~ 131 (235)
.|.+.|.+ ..+++|+++++|.+|.. ++++ +. |.+. +|+ ....+|.||+|+
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~--~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~Ad 213 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILF--HEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAE 213 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEE--CTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEE--cCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEee
Confidence 45554443 34789999999999986 4433 33 6544 342 123689999993
No 205
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=29.62 E-value=70 Score=27.66 Aligned_cols=39 Identities=8% Similarity=0.218 Sum_probs=27.3
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
++..+++++. .+|+.|.. +++ ++..++|+. ..||.||+|
T Consensus 69 ~~~~gv~~~~-~~v~~id~--~~~--~V~~~~g~~-i~~d~lviA 107 (437)
T 3sx6_A 69 VERKGIHFIA-QSAEQIDA--EAQ--NITLADGNT-VHYDYLMIA 107 (437)
T ss_dssp HHTTTCEEEC-SCEEEEET--TTT--EEEETTSCE-EECSEEEEC
T ss_pred HHHCCCEEEE-eEEEEEEc--CCC--EEEECCCCE-EECCEEEEC
Confidence 3345677764 68999975 433 677777764 379999999
No 206
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=29.30 E-value=50 Score=30.93 Aligned_cols=48 Identities=15% Similarity=0.160 Sum_probs=31.3
Q ss_pred HHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeE-EEeCCCcccccccEEEecC
Q 026682 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~G~~~~~~d~VVlA~ 131 (235)
.+.+.+.+..++++ ++..|..|.. +++++. |.+.+|.. -.+|.||+|+
T Consensus 122 ~L~~~l~~~~GV~I-~~~~V~~L~~--d~g~V~GV~t~~G~~-i~Ad~VVLAT 170 (641)
T 3cp8_A 122 YMRRIVEHEPNIDL-LQDTVIGVSA--NSGKFSSVTVRSGRA-IQAKAAILAC 170 (641)
T ss_dssp HHHHHHHTCTTEEE-EECCEEEEEE--ETTEEEEEEETTSCE-EEEEEEEECC
T ss_pred HHHHHHHhCCCCEE-EeeEEEEEEe--cCCEEEEEEECCCcE-EEeCEEEECc
Confidence 34444443236677 4568999875 455555 77777754 3689999993
No 207
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=28.88 E-value=29 Score=32.18 Aligned_cols=55 Identities=11% Similarity=-0.021 Sum_probs=37.0
Q ss_pred CCeeEcCeeEEEEEeecCCC-----CeEEEe-CCCc-ccccccEEEecCCCCCccchhcccCCC
Q 026682 90 GVESKFGVGVGRFEWLEDKN-----LWSVSG-LDGQ-SLGQFNGVVASDKNVVSPRFRDVTGRP 146 (235)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~-----~w~l~~-~~G~-~~~~~d~VVlA~~~~pap~~~~ll~~p 146 (235)
+++|++++.|++|.. +++ +.++.. .+|+ ....+|.||++.-..+.++.+.+.++.
T Consensus 274 nv~v~~~~~V~~i~~--~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG 335 (623)
T 3pl8_A 274 RFNLFPAVACERVVR--NALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFG 335 (623)
T ss_dssp EEEEECSEEEEEEEE--CTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSS
T ss_pred CEEEEeCCEEEEEEE--ECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCC
Confidence 578999999999986 332 234443 3454 224689999996666777776666543
No 208
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=28.77 E-value=93 Score=28.42 Aligned_cols=48 Identities=4% Similarity=-0.182 Sum_probs=30.6
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecC-CCCe---EEEe-CCCcc-cccccEEEecC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLED-KNLW---SVSG-LDGQS-LGQFNGVVASD 131 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~-~~~w---~l~~-~~G~~-~~~~d~VVlA~ 131 (235)
|.+.+.+ .+++|++++.|..|.. + ++.. .+.. .+|+. ...++.||+|.
T Consensus 149 L~~~~~~-~gv~i~~~~~v~~L~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAt 202 (588)
T 2wdq_A 149 LYQQNLK-NHTTIFSEWYALDLVK--NQDGAVVGCTALCIETGEVVYFKARATVLAT 202 (588)
T ss_dssp HHHHHHH-TTCEEEETEEEEEEEE--CTTSCEEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred HHHHHHh-CCCEEEeCcEEEEEEE--CCCCEEEEEEEEEcCCCeEEEEEcCEEEECC
Confidence 4444433 4789999999999985 4 3332 3332 45642 23689999994
No 209
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=28.54 E-value=52 Score=29.34 Aligned_cols=51 Identities=14% Similarity=-0.058 Sum_probs=30.7
Q ss_pred CCeeEcCeeEEEEEeecCC-CC--eEEEe--CCC---c-ccccccEEEecCCCCCccchhcc
Q 026682 90 GVESKFGVGVGRFEWLEDK-NL--WSVSG--LDG---Q-SLGQFNGVVASDKNVVSPRFRDV 142 (235)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~-~~--w~l~~--~~G---~-~~~~~d~VVlA~~~~pap~~~~l 142 (235)
+++|+++++|++|.. ++ ++ ..+.. .+| + ....++.||||.-.+..|+.+.+
T Consensus 236 n~~i~~~~~V~~i~~--~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~ 295 (504)
T 1n4w_A 236 KVTIQTLHQVKTIRQ--TKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVR 295 (504)
T ss_dssp SEEEEESEEEEEEEE--CTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEE--CCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHh
Confidence 378999999999986 43 22 22333 355 1 22357899999433344444443
No 210
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=28.54 E-value=65 Score=27.98 Aligned_cols=43 Identities=12% Similarity=-0.050 Sum_probs=28.2
Q ss_pred HHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.+.|. .. +++++++.|.+++. ++ +......+|+. ..+|.||+|
T Consensus 197 ~~~l~-~~-v~i~~~~~v~~i~~--~~-~v~~v~~~g~~-i~~D~Vv~a 239 (449)
T 3kd9_A 197 EEKLK-KH-VNLRLQEITMKIEG--EE-RVEKVVTDAGE-YKAELVILA 239 (449)
T ss_dssp HHHHT-TT-SEEEESCCEEEEEC--SS-SCCEEEETTEE-EECSEEEEC
T ss_pred HHHHH-hC-cEEEeCCeEEEEec--cC-cEEEEEeCCCE-EECCEEEEe
Confidence 33444 34 88999999999984 33 44322335544 369999998
No 211
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=28.50 E-value=48 Score=29.62 Aligned_cols=51 Identities=8% Similarity=-0.058 Sum_probs=30.6
Q ss_pred CCeeEcCeeEEEEEeecCC-CC--eEEEe--CCCc----ccccccEEEecCCCCCccchhcc
Q 026682 90 GVESKFGVGVGRFEWLEDK-NL--WSVSG--LDGQ----SLGQFNGVVASDKNVVSPRFRDV 142 (235)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~-~~--w~l~~--~~G~----~~~~~d~VVlA~~~~pap~~~~l 142 (235)
+++|+++++|++|.. ++ ++ ..|.. .+|. ....++.|||+.-.+-.|+.+.+
T Consensus 241 n~~i~~~~~v~~i~~--~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~ 300 (507)
T 1coy_A 241 KLTITTLHRVTKVAP--ATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVS 300 (507)
T ss_dssp CEEEECSEEEEEEEE--CSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEE--CCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHh
Confidence 378999999999986 44 21 22333 2452 22357899999333334444433
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=27.61 E-value=60 Score=28.29 Aligned_cols=45 Identities=11% Similarity=0.040 Sum_probs=29.9
Q ss_pred HHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCC-Cc-ccccccEEEec
Q 026682 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD-GQ-SLGQFNGVVAS 130 (235)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~-G~-~~~~~d~VVlA 130 (235)
.+.+..+++++++++|..|.. ..+...+.... +. ....||.||+|
T Consensus 65 ~~~~~~~i~~~~~~~V~~id~--~~~~~~~~~~~~~~~~~~~yd~lVIA 111 (437)
T 4eqs_A 65 KFYDRKQITVKTYHEVIAIND--ERQTVSVLNRKTNEQFEESYDKLILS 111 (437)
T ss_dssp HHHHHHCCEEEETEEEEEEET--TTTEEEEEETTTTEEEEEECSEEEEC
T ss_pred HHHHhcCCEEEeCCeEEEEEc--cCcEEEEEeccCCceEEEEcCEEEEC
Confidence 344445678899999999985 55555554432 21 22369999999
No 213
>3p12_A D-ribose pyranase; carbohydrate metabolism, ISOM; 2.35A {Staphylococcus aureus} SCOP: c.133.1.0 PDB: 3p13_A*
Probab=27.60 E-value=60 Score=24.25 Aligned_cols=47 Identities=23% Similarity=0.302 Sum_probs=26.1
Q ss_pred ccccEEEecCCCCCccchhcccCCCCCCCC-CcchHHHHHhcCCCCcc
Q 026682 122 GQFNGVVASDKNVVSPRFRDVTGRPPPLDL-TFAPDLAVKLEEIPVNP 168 (235)
Q Consensus 122 ~~~d~VVlA~~~~pap~~~~ll~~p~~~~~-~~~~~l~~~l~~v~~~p 168 (235)
|..|.++++|.+.|+|.-.....+.--... .+..-+...|..++...
T Consensus 21 GHgD~ivIaDag~Pip~~~~~Idlal~~GvP~~~~vL~aIL~~~~ve~ 68 (144)
T 3p12_A 21 GHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLEEMEIQK 68 (144)
T ss_dssp CTTCEEEEECTTSCCCSSTTEEECCCBTTBSCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEccCCCCCCCCCcEEEeecCCCCCCHHHHHHHHHHhcCcce
Confidence 456899999999999875444321000000 12223455666676664
No 214
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=27.56 E-value=55 Score=28.46 Aligned_cols=40 Identities=10% Similarity=0.200 Sum_probs=29.1
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeC-CC-cccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGL-DG-QSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~G-~~~~~~d~VVlA 130 (235)
.+++++++++|..|.. .++.+.+... +| .....||.||+|
T Consensus 71 ~gv~~~~~~~v~~i~~--~~~~v~v~~~~~g~~~~~~~d~lviA 112 (452)
T 2cdu_A 71 LGANVQMRHQVTNVDP--ETKTIKVKDLITNEEKTEAYDKLIMT 112 (452)
T ss_dssp TTCEEEESEEEEEEEG--GGTEEEEEETTTCCEEEEECSEEEEC
T ss_pred cCCEEEeCCEEEEEEc--CCCEEEEEecCCCceEEEECCEEEEc
Confidence 5678999999999986 5667777652 22 122479999999
No 215
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.54 E-value=69 Score=29.67 Aligned_cols=47 Identities=19% Similarity=0.214 Sum_probs=31.8
Q ss_pred hHHHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCc-ccccccEEEec
Q 026682 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~-~~~~~d~VVlA 130 (235)
..+.+...+..+++++++++|.++.. ++..+. .+|+ ....+|.||++
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~-~~G~~~~i~~D~Vi~a 623 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVV-INGETQVLAVDNVVIC 623 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEET----TEEEEE-ETTEEEEECCSEEEEC
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEe-cCCeEEEEeCCEEEEC
Confidence 33444444446899999999999962 355564 4663 23479999999
No 216
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=26.39 E-value=96 Score=28.70 Aligned_cols=51 Identities=10% Similarity=-0.115 Sum_probs=32.3
Q ss_pred HHHHHHhc---CCCCeeEcCeeEEEEEeecCCCC---eEEEe-CCCcc-cccccEEEecCC
Q 026682 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNL---WSVSG-LDGQS-LGQFNGVVASDK 132 (235)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~---w~l~~-~~G~~-~~~~d~VVlA~~ 132 (235)
.+.+.|.+ ..+++|+.++.|..|.. +++. ..+.. .+|+. ...++.||+|.-
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATG 214 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLM--ENGECRGVIALCIEDGTIHRFRAKNTVIATG 214 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEE--ECCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 44454443 24789999999999985 3443 33333 46642 236899999943
No 217
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=26.34 E-value=41 Score=29.28 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=22.6
Q ss_pred eecccCCCceecCChHHHHHHHHHHh
Q 026682 14 MLFDHGAPFFTVTNNDVLALVREWES 39 (235)
Q Consensus 14 ~~fDhGAqyft~~~~~f~~~v~~~~~ 39 (235)
..||+|++||....+.+.++++++..
T Consensus 63 ~~~~~g~~~~~~~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 63 YLVEQGPNSFLDREPATRALAAALNL 88 (478)
T ss_dssp EEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred eeeecChhhhhhhhHHHHHHHHHcCC
Confidence 57999999999888999999998743
No 218
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=25.14 E-value=63 Score=28.65 Aligned_cols=50 Identities=8% Similarity=-0.085 Sum_probs=33.8
Q ss_pred hHHHHHHhcCC--CCeeEcCeeEEEEEeecCCCCeEEEe-CCCc-ccccccEEEec
Q 026682 79 NSICKALCHQP--GVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVAS 130 (235)
Q Consensus 79 ~~l~~~La~~l--~~~i~~~~~V~~i~~~~~~~~w~l~~-~~G~-~~~~~d~VVlA 130 (235)
..+.+.+.+.+ ++++++++.|.+|.+ .++.+.+.. ++|+ ....||.||+|
T Consensus 161 ~~~~~~l~~~l~~~v~~~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~d~lvlA 214 (493)
T 1y56_A 161 RKVVEELVGKLNENTKIYLETSALGVFD--KGEYFLVPVVRGDKLIEILAKRVVLA 214 (493)
T ss_dssp HHHHHHHHHTCCTTEEEETTEEECCCEE--CSSSEEEEEEETTEEEEEEESCEEEC
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEc--CCcEEEEEEecCCeEEEEECCEEEEC
Confidence 34555555433 677899999999986 666676654 3443 12479999999
No 219
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=24.99 E-value=92 Score=29.07 Aligned_cols=52 Identities=12% Similarity=0.024 Sum_probs=32.7
Q ss_pred HHHHHHhcC---CCCeeEcCeeEEEEEeecCCC---CeEEEe-CCCcc-cccccEEEecCCC
Q 026682 80 SICKALCHQ---PGVESKFGVGVGRFEWLEDKN---LWSVSG-LDGQS-LGQFNGVVASDKN 133 (235)
Q Consensus 80 ~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~---~w~l~~-~~G~~-~~~~d~VVlA~~~ 133 (235)
.|.+.|.+. .+++|+.++.|..|.. +++ +..+.. .+|+. ...++.||+|.-+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIH--QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEE--ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEe--cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 455544443 3689999999999975 333 233332 46652 2368999999433
No 220
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=24.73 E-value=45 Score=29.98 Aligned_cols=62 Identities=16% Similarity=0.081 Sum_probs=37.1
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCCC-eEEEeC---CCcc----cccccEEEecCCCCCccchhcccC
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQS----LGQFNGVVASDKNVVSPRFRDVTG 144 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~---~G~~----~~~~d~VVlA~~~~pap~~~~ll~ 144 (235)
+.+.+.+..+++|++++.|++|.. ++++ .-|... +|+. ...++.||||.-.+..|+.+.+.+
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~--~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sG 270 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVR--NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSG 270 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEE--ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEE--eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcC
Confidence 555555545688999999999986 3332 223333 3542 115689999943334455555544
No 221
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=24.60 E-value=86 Score=28.76 Aligned_cols=42 Identities=14% Similarity=-0.089 Sum_probs=28.4
Q ss_pred CC-CeeEcCeeEEEEEeecCCCC---eEEE-eCCCcc-cccccEEEecCC
Q 026682 89 PG-VESKFGVGVGRFEWLEDKNL---WSVS-GLDGQS-LGQFNGVVASDK 132 (235)
Q Consensus 89 l~-~~i~~~~~V~~i~~~~~~~~---w~l~-~~~G~~-~~~~d~VVlA~~ 132 (235)
.+ ++|+.++.|..|.. +++. +.+. ..+|+. ...++.||+|+-
T Consensus 147 ~gnv~i~~~~~v~~l~~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 194 (602)
T 1kf6_A 147 FPQIQRFDEHFVLDILV--DDGHVRGLVAMNMMEGTLVQIRANAVVMATG 194 (602)
T ss_dssp CTTEEEEETEEEEEEEE--ETTEEEEEEEEETTTTEEEEEECSCEEECCC
T ss_pred CCCcEEEeCCEEEEEEE--eCCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 45 78999999999986 4442 3333 256752 236899999943
No 222
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=23.09 E-value=83 Score=27.51 Aligned_cols=45 Identities=9% Similarity=-0.034 Sum_probs=30.2
Q ss_pred HHHHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcc-cccccEEEec
Q 026682 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS-LGQFNGVVAS 130 (235)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~-~~~~d~VVlA 130 (235)
..+.+.+..++++..+ +|..+. .+.+.+..++|+. ...||.||+|
T Consensus 94 ~~~~~~~~~~v~~~~g-~v~~id----~~~~~V~~~~g~~~~~~~d~lviA 139 (466)
T 3l8k_A 94 HKRNMSQYETLTFYKG-YVKIKD----PTHVIVKTDEGKEIEAETRYMIIA 139 (466)
T ss_dssp HHHHHTTCTTEEEESE-EEEEEE----TTEEEEEETTSCEEEEEEEEEEEC
T ss_pred hHHHHHHhCCCEEEEe-EEEEec----CCeEEEEcCCCcEEEEecCEEEEC
Confidence 3344555566677666 566664 3478888887754 1379999999
No 223
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.09 E-value=88 Score=27.14 Aligned_cols=42 Identities=21% Similarity=0.107 Sum_probs=28.8
Q ss_pred HhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEecC
Q 026682 85 LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (235)
Q Consensus 85 La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA~ 131 (235)
+++..+++++.++.+. + +.+.|.+...+|.....||.||+|.
T Consensus 100 ~~~~~gv~~~~g~~~~-i----d~~~v~V~~~~G~~~i~~d~lViAT 141 (455)
T 1ebd_A 100 LLKGNKVEIVKGEAYF-V----DANTVRVVNGDSAQTYTFKNAIIAT 141 (455)
T ss_dssp HHHTTTCEEEESEEEE-E----ETTEEEEEETTEEEEEECSEEEECC
T ss_pred HHHhCCCEEEEEEEEE-c----cCCeEEEEeCCCcEEEEeCEEEEec
Confidence 3444678889888664 4 3457888877772223799999993
No 224
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=22.69 E-value=1e+02 Score=26.17 Aligned_cols=40 Identities=10% Similarity=0.182 Sum_probs=26.0
Q ss_pred hcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcc---cccccEEEec
Q 026682 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS---LGQFNGVVAS 130 (235)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~---~~~~d~VVlA 130 (235)
++..+++++.+ +|..+.+ +++...+ .+|.. ...||.||+|
T Consensus 66 ~~~~gv~~~~~-~v~~i~~--~~~~V~~--~~g~~~~~~~~~d~lViA 108 (409)
T 3h8l_A 66 LPEKGIQFQEG-TVEKIDA--KSSMVYY--TKPDGSMAEEEYDYVIVG 108 (409)
T ss_dssp TGGGTCEEEEC-EEEEEET--TTTEEEE--ECTTSCEEEEECSEEEEC
T ss_pred HhhCCeEEEEe-eEEEEeC--CCCEEEE--ccCCcccceeeCCEEEEC
Confidence 33456788877 8999985 4444444 44431 1369999998
No 225
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=22.48 E-value=75 Score=27.11 Aligned_cols=36 Identities=8% Similarity=0.117 Sum_probs=26.8
Q ss_pred CCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
.++++++ ++|..|.+ .. ..+..++|..+ .||.||+|
T Consensus 70 ~~i~~~~-~~v~~id~--~~--~~v~~~~g~~~-~~d~lvlA 105 (404)
T 3fg2_P 70 QAIELIS-DRMVSIDR--EG--RKLLLASGTAI-EYGHLVLA 105 (404)
T ss_dssp TTEEEEC-CCEEEEET--TT--TEEEESSSCEE-ECSEEEEC
T ss_pred CCCEEEE-EEEEEEEC--CC--CEEEECCCCEE-ECCEEEEe
Confidence 4667888 99999985 43 35666777543 69999999
No 226
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.27 E-value=51 Score=27.99 Aligned_cols=39 Identities=10% Similarity=-0.027 Sum_probs=28.1
Q ss_pred HHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
...+..+++++++++|.+++. + .+..++|+ ..+|.||++
T Consensus 191 ~~l~~~gV~i~~~~~v~~i~~----~--~v~~~~g~--i~~D~vi~a 229 (367)
T 1xhc_A 191 DMLEETGVKFFLNSELLEANE----E--GVLTNSGF--IEGKVKICA 229 (367)
T ss_dssp HHHHHTTEEEECSCCEEEECS----S--EEEETTEE--EECSCEEEE
T ss_pred HHHHHCCCEEEcCCEEEEEEe----e--EEEECCCE--EEcCEEEEC
Confidence 333345789999999999862 2 35556775 479999998
No 227
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=21.87 E-value=49 Score=28.04 Aligned_cols=42 Identities=10% Similarity=-0.038 Sum_probs=29.0
Q ss_pred HHHhcCCCCeeEcCeeEEEEEeecCCCCeEEEeCCCcccccccEEEec
Q 026682 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (235)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~G~~~~~~d~VVlA 130 (235)
+.+++..+++++++++|..+.. . .+.|..+++ . ..||.||+|
T Consensus 67 ~~~~~~~~v~~~~~~~v~~i~~--~--~~~v~~~~~-~-~~~d~lviA 108 (384)
T 2v3a_A 67 GAMAEQLNARILTHTRVTGIDP--G--HQRIWIGEE-E-VRYRDLVLA 108 (384)
T ss_dssp HHHHHHTTCEEECSCCCCEEEG--G--GTEEEETTE-E-EECSEEEEC
T ss_pred HHHHHhCCcEEEeCCEEEEEEC--C--CCEEEECCc-E-EECCEEEEe
Confidence 3344445778899999999974 3 356665544 3 379999998
Done!