BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026688
(235 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic
OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1
Length = 355
Score = 358 bits (920), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 165/234 (70%), Positives = 196/234 (83%), Gaps = 1/234 (0%)
Query: 1 MTAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPV 60
+ ASGSK Y E M +TE FR P +SF+YERGWRQNF+WGGFPGPEKEFE+ K YLKPV
Sbjct: 122 LAVASGSKRYSEPMPLSTELFRTPLVSFLYERGWRQNFIWGGFPGPEKEFEMAKAYLKPV 181
Query: 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP-KENFLLV 119
LGGNIIDASCGSG+FSR+F +S LFSLV+ALDYSENML+QCYE + +E NFP KE +LV
Sbjct: 182 LGGNIIDASCGSGMFSRLFTRSDLFSLVIALDYSENMLRQCYELLNKEENFPNKEKLVLV 241
Query: 120 RADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI 179
RADI+RLPF S S+DAVHAGAA+HCW SPS+ VAEISRVLRPGGVFV TT+I DGPF+ I
Sbjct: 242 RADIARLPFLSGSVDAVHAGAALHCWPSPSSAVAEISRVLRPGGVFVATTFIYDGPFSFI 301
Query: 180 PFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNRGFVMFTATKPS 233
PF + LRQ +M+ SGS+ FL+ERE+ED+C+ACGLV+F RN F+M +ATKPS
Sbjct: 302 PFLKNLRQEIMRYSGSHIFLNERELEDICKACGLVNFTRVRNGPFIMLSATKPS 355
>sp|Q0WPT7|Y2104_ARATH Uncharacterized methyltransferase At2g41040, chloroplastic
OS=Arabidopsis thaliana GN=At2g41040 PE=1 SV=1
Length = 352
Score = 252 bits (643), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/233 (52%), Positives = 161/233 (69%), Gaps = 5/233 (2%)
Query: 1 MTAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPV 60
+T + DY E+ TE FR P +SF+YERGWRQ F GFPGP++EF + + Y K
Sbjct: 124 LTVTADLDDYNEVKPITTELFRSPLVSFLYERGWRQAFKRSGFPGPDEEFRMAEEYFKEA 183
Query: 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKE-NFLLV 119
GG ++D SCGSGLFSR FA+SG +S V+ALDYSENML+QC EF++ ++ F N +V
Sbjct: 184 EGGLLVDVSCGSGLFSRKFAQSGKYSGVIALDYSENMLRQCKEFIKNDNTFDNSTNIAVV 243
Query: 120 RADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI 179
RAD+SRLPF S S+DAVHAGAA+HCW SP+ +AEI RVLR GGVFVGTT++ P
Sbjct: 244 RADVSRLPFPSGSVDAVHAGAALHCWPSPTNAIAEICRVLRSGGVFVGTTFLRYSPST-- 301
Query: 180 PFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNRGFVMFTATKP 232
P+ ++R +I SY +L + EI+D+C +CGL D++ F+MFTA KP
Sbjct: 302 PW--IIRPFQSRILQSYNYLMQDEIKDVCTSCGLTDYEDYIQDSFIMFTARKP 352
>sp|E4QJB8|BIOC_METS6 Malonyl-CoA O-methyltransferase BioC OS=Methylovorus sp. (strain
MP688) GN=bioC PE=3 SV=1
Length = 296
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 10/150 (6%)
Query: 65 IIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQ---CYEFVQQESNFPKENFLLVRA 121
++DA CG+G S + S V++LD + MLK+ VQ+ F + + V A
Sbjct: 52 VLDAGCGTGHASAALSARYRQSQVISLDIAMGMLKKTMAARSLVQRLFGFDRRH--AVCA 109
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF 181
DI RLP A++SID V + AI + EI RVL+P G+ + +T GP L
Sbjct: 110 DIERLPLAAASIDLVWSNMAIQWCNDLDQAFGEIQRVLKPEGLLMFSTL---GPDTLKEL 166
Query: 182 SRLLRQNMMQISGSYTFLSEREIED-LCRA 210
RQ+ ++ S F+ +I D L RA
Sbjct: 167 RAATRQDNTHVTVS-RFIDMHDIGDALVRA 195
>sp|E3G327|BIOC_ENTCS Malonyl-CoA O-methyltransferase BioC OS=Enterobacter cloacae
(strain SCF1) GN=bioC PE=3 SV=1
Length = 251
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 63 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122
++DA CG G SR + +G V ALD S ML + QQ ++ V+AD
Sbjct: 44 ARVLDAGCGPGGISRYWRDNGCE--VTALDLSAQMLAEARR--QQAADH------YVQAD 93
Query: 123 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173
I +P AS+ D V + A+ S V E+ R+LRPGGV TT D
Sbjct: 94 IEAIPLASAQFDLVWSNLAVQWCDSLQDAVQELYRMLRPGGVLAFTTLAAD 144
>sp|Q24W96|UBIE_DESHY Demethylmenaquinone methyltransferase OS=Desulfitobacterium
hafniense (strain Y51) GN=ubiE PE=3 SV=1
Length = 253
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 20/144 (13%)
Query: 25 FMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-G 83
MSF ++GWR+ V P G ++D CG+ S A + G
Sbjct: 43 LMSFGLDKGWRKKAVQTVEAKP---------------GMTMVDICCGTAQLSLELAMTVG 87
Query: 84 LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR-ADISRLPFASSSIDAVHAGAAI 142
+ LD+SENMLK+ E + + P + + +R D LPFA +S D G +
Sbjct: 88 EQGQITGLDFSENMLKKAQENL---AGSPYRSIIELRQGDAMNLPFADNSFDGATVGWGL 144
Query: 143 HCWSSPSTGVAEISRVLRPGGVFV 166
GV E+ RV++PGG+ V
Sbjct: 145 RNLPDLEKGVQEMIRVVKPGGMVV 168
>sp|Q2YY85|UBIE_STAAB Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFGDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|P67063|UBIE_STAAW Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MW2) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|A8Z450|UBIE_STAAT Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|Q6G992|UBIE_STAAS Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MSSA476) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|P67062|UBIE_STAAN Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain N315) GN=ubiE PE=1 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|P67061|UBIE_STAAM Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=ubiE PE=1 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|A6QH20|UBIE_STAAE Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Newman) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|Q5HFV2|UBIE_STAAC Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain COL) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|A5ISZ9|UBIE_STAA9 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain JH9) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|A6U1T9|UBIE_STAA2 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain JH1) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|A7X2H6|UBIE_STAA1 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|Q6GGU0|UBIE_STAAR Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MRSA252) GN=ubiE PE=3 SV=1
Length = 241
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+G ++ +K+ G V +D+SENML+
Sbjct: 31 FEQHKVWRKRVMKDMGVRKGMKALDVCCGTGDWTIALSKAVGSTGEVTGIDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E EN LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTASMENVKLVHGDAMELPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|D2T333|BIOC_ERWP6 Malonyl-CoA O-methyltransferase BioC OS=Erwinia pyrifoliae (strain
DSM 12163 / CIP 106111 / Ep16/96) GN=bioC PE=3 SV=1
Length = 262
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN 110
E + + +P ++DA CG+G FS+ + G + V ALD SE ML+ E +
Sbjct: 43 ERLLEHARPGNALRVLDAGCGTGWFSQRWRAGGHW--VTALDLSEKMLQHARENQAADCY 100
Query: 111 FPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169
P DI LPFA +S D + A+ SS + E+ RV +PGG + +T
Sbjct: 101 LP--------GDIEALPFADASFDRCWSNLAVQWCSSLPLALRELRRVTKPGGQVLFST 151
>sp|A0PQX0|PHMT1_MYCUA Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase 1
OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_2377
PE=3 SV=1
Length = 271
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G +++ SCG G + ++ + LD + +K C Q+ N P +F VR
Sbjct: 81 GKRVLEVSCGHGGGASYLTRTLHPASYTGLDLNRAGIKLC----QRRHNLPGLDF--VRG 134
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168
D LPF S D V A HC+ S +AE+ RVLRPGG + T
Sbjct: 135 DAENLPFEDESFDVVLKVEASHCYPHFSRFLAEVVRVLRPGGYLLYT 181
>sp|Q6D3C1|BIOC_ERWCT Malonyl-CoA O-methyltransferase BioC OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=bioC
PE=3 SV=1
Length = 253
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G ++DA CG+G FSR + ++G V ALD S ML E + +L
Sbjct: 45 GLQVLDAGCGTGHFSRYWRQAG--RNVTALDLSAEMLAYARE------QHAADRYL--EG 94
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFN 177
DI LP A S +D ++ A+ S + E+ R+ RPGGV T + DG +
Sbjct: 95 DIENLPLADSCVDICYSNLAVQWCDSLPRALGELYRITRPGGVIAFAT-LADGSLS 149
>sp|Q4L6H3|UBIE_STAHJ Demethylmenaquinone methyltransferase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ubiE PE=3 SV=1
Length = 239
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+ ++ +K+ G V LD+SENML+
Sbjct: 31 FEQHKVWRKHVMKDMHVKVGSKALDVCCGTADWTIALSKAVGAHGEVTGLDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E N LV D LPF +S D V G + + E++RVL+P
Sbjct: 89 ---VGKEKTKHMNNIHLVHGDAMNLPFEDNSFDYVTIGFGLRNVPDYLVALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMIV 150
>sp|A9WRT1|UBIE_RENSM Demethylmenaquinone methyltransferase OS=Renibacterium salmoninarum
(strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589
/ NCIMB 2235) GN=ubiE PE=3 SV=1
Length = 237
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 119
V G ++D + G+G S +A +GL VVALD+S MLK + P +F +
Sbjct: 50 VPGQRVLDVAAGTGTSSEPYADAGLD--VVALDFSLGMLKVG------KRRRPDIDF--I 99
Query: 120 RADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT--TYIVDGPFN 177
D + LPFA +S DAV + + P +AE+ RV +PGG V ++ GPF
Sbjct: 100 AGDATALPFADNSFDAVTISFGLRNVNEPKKALAEMLRVTKPGGKLVVAEFSHPTFGPFR 159
Query: 178 LIPFSRLLR 186
+ L+R
Sbjct: 160 TVYTEYLMR 168
>sp|Q6ANL3|UBIE_DESPS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343)
GN=ubiE PE=3 SV=1
Length = 246
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 45/228 (19%)
Query: 27 SFIYERGWRQNFVWGGFPGPEKEFELMKG---YLKPVL--------------------GG 63
S E R+ FV PG EK F+ + G + V+ G
Sbjct: 7 SLFLEMKCREEFVLSKGPGVEKMFDAIAGRYDLMNKVMTMGQDQRWRRFVVAKAGDPGAG 66
Query: 64 NIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123
++D + G+G + + +S + V D+S NML++ + F + D
Sbjct: 67 QVLDLATGTGDIAALMHRSYPRAQVTGGDFSRNMLEEA------KKRFAGQGIDWQVCDA 120
Query: 124 SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSR 183
++LPFA ++ +AV G + S+ +AE+ RVL+PGG V + PF +
Sbjct: 121 NKLPFADNTFEAVTFGYLLRNVDDASSVLAEVYRVLKPGGRCVCLDTTPPAKNIIYPFVQ 180
Query: 184 --------LLRQNMMQISGSYTFLSEREIE--------DLCRACGLVD 215
LL + + +Y +LS +E DL R G VD
Sbjct: 181 FYFRYGIPLLGRMIAADEAAYAYLSGSTMEFHSAEVLADLFRGAGFVD 228
>sp|Q89AK7|BIOC_BUCBP Malonyl-CoA O-methyltransferase BioC OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=bioC PE=3 SV=1
Length = 247
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 65 IIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124
I+DA CG+G FS+ + + G + V ALD+S+NML N ++ L AD+
Sbjct: 44 ILDAGCGTGWFSKKWRQLG--NTVTALDFSKNML-------LTAKNTNSADYYL-HADME 93
Query: 125 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL 184
+LP + D + ++ + + ++E+ RV +PGG+ V +T I G L F++
Sbjct: 94 QLPICDNIFDLSWSNLSLQWCNKFNKAISELCRVTKPGGMVVFST-IAHGS--LYEFNKA 150
Query: 185 LRQNMMQISGSY---TFLSEREIE-DLCRACGLVD 215
R I+ SY FLS +I+ C L+D
Sbjct: 151 YR----TINSSYQENKFLSINDIKLSCCNKKTLID 181
>sp|B9DNV5|UBIE_STACT Demethylmenaquinone methyltransferase OS=Staphylococcus carnosus
(strain TM300) GN=ubiE PE=3 SV=1
Length = 241
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+ ++ +K+ G V+ LD+SENMLK
Sbjct: 31 FEQHKVWRKRVMKSMQVKKGSKALDVCCGTADWTIALSKAVGPSGEVIGLDFSENMLK-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V +E N LV+ D LPF + D V G + + E++RVL+P
Sbjct: 89 ---VGEEKTKNMSNIQLVQGDAMDLPFDDNEFDYVTIGFGLRNIPDYVIALKEMNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMAV 150
>sp|Q8EXJ3|UBIE_LEPIN Demethylmenaquinone methyltransferase OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
GN=ubiE PE=3 SV=1
Length = 249
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 SFIYERGWRQNFVWGGFPGPEKEFEL-MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF 85
SF+ R W+ + V +E E G+L +++D CG+G S S
Sbjct: 35 SFLLHRVWKNHLV--------REIENNFSGHL------HVLDLCCGTGDISLRLENSSFV 80
Query: 86 SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAGAAIHC 144
V +D+SENML+ +++++ + +F L D ++L F +S D V G +
Sbjct: 81 DHVTCVDFSENMLEIAKTRLKKQAQKGRVHFEL--GDATKLIQFQNSQFDVVSIGFGLRN 138
Query: 145 WSSPSTGVAEISRVLRPGGVFVG 167
+ S + EI RVL+PGG+F+
Sbjct: 139 VDNLSKAIGEIFRVLKPGGMFLN 161
>sp|Q75FL1|UBIE_LEPIC Demethylmenaquinone methyltransferase OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar copenhageni
(strain Fiocruz L1-130) GN=ubiE PE=3 SV=1
Length = 249
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 SFIYERGWRQNFVWGGFPGPEKEFEL-MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF 85
SF+ R W+ + V +E E G+L +++D CG+G S S
Sbjct: 35 SFLLHRVWKNHLV--------REIENNFSGHL------HVLDLCCGTGDISLRLENSSFV 80
Query: 86 SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAGAAIHC 144
V +D+SENML+ +++++ + +F L D ++L F +S D V G +
Sbjct: 81 DHVTCVDFSENMLEIAKTRLKKQAQKGRVHFEL--GDATKLIQFQNSQFDVVSIGFGLRN 138
Query: 145 WSSPSTGVAEISRVLRPGGVFVG 167
+ S + EI RVL+PGG+F+
Sbjct: 139 VDNLSKAIGEIFRVLKPGGMFLN 161
>sp|Q2SBD7|BIOC_HAHCH Malonyl-CoA O-methyltransferase BioC OS=Hahella chejuensis (strain
KCTC 2396) GN=bioC PE=3 SV=1
Length = 279
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 64 NIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123
+IID CG+G + S + + A D S M+ E+ + E + + AD+
Sbjct: 65 DIIDVGCGTGWLTHRLKNSFPEARLCAYDLSPGMI----EYALAHHDNVAEIWAV--ADM 118
Query: 124 SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSR 183
LP A++S D V + A+ P AE SRVLRPGG + +T + F
Sbjct: 119 ESLPVANASQDLVFSNMAMQWLDDPRAWFAEASRVLRPGGRLICSTLLTQTLFE------ 172
Query: 184 LLRQNMMQISGSYT---FLSEREIEDLCRACGL 213
L Q + G FLS ++ + +CGL
Sbjct: 173 -LEQAWHGVDGGRHVNRFLSAEQVAEAAVSCGL 204
>sp|Q8CSH9|UBIE_STAES Demethylmenaquinone methyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=ubiE PE=3 SV=1
Length = 241
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+ ++ +++ G V LD+SENML+
Sbjct: 31 FEQHKVWRKHVMSTMNVQKGSKALDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V ++ EN LV D LPF +S D V G + + + E+ RVL+P
Sbjct: 89 ---VGKQKTASLENIQLVHGDAMNLPFDDNSFDYVTIGFGLRNVPDYLSALKEMHRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|Q5HP74|UBIE_STAEQ Demethylmenaquinone methyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=ubiE PE=3 SV=1
Length = 241
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+ ++ +++ G V LD+SENML+
Sbjct: 31 FEQHKVWRKHVMSTMNVQKGSKALDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V ++ EN LV D LPF +S D V G + + + E+ RVL+P
Sbjct: 89 ---VGKQKTASLENIQLVHGDAMNLPFDDNSFDYVTIGFGLRNVPDYLSALKEMHRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMVV 150
>sp|Q5ZT34|BIOC_LEGPH Malonyl-CoA O-methyltransferase BioC OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=bioC PE=3 SV=2
Length = 284
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
Query: 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES 109
FE ++ YLK + I+D CG G FS+ A + +V +D S ML+Q +
Sbjct: 33 FERLQ-YLK-IAPRRILDLGCGPGFFSKELALLYPKAQIVGMDLSFAMLEQARKKQGWRR 90
Query: 110 NFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169
+P LV AD+ ++PFA+ + D V A IH SS E++RV+ G + TT
Sbjct: 91 KWP-----LVSADMQKMPFATGAFDLVFANQVIHWSSSLGMVFRELNRVMNVNGCLMFTT 145
>sp|Q8A005|UBIE_BACTN Demethylmenaquinone methyltransferase OS=Bacteroides
thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC
10582 / E50 / VPI-5482) GN=ubiE PE=3 SV=1
Length = 245
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 17/141 (12%)
Query: 26 MSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF 85
+S +R WR+ + +L+P +I+D + G+G F+ + +
Sbjct: 39 LSLGIDRSWRRKAI---------------AWLRPFRPQHIMDVATGTGDFAILACRELNP 83
Query: 86 SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCW 145
++ D SE M+ E V++E K +F R D + L FA + DA+ I +
Sbjct: 84 DELIGTDISEGMMNVGREKVKKEGLSDKISF--AREDCTSLSFADNRFDAITVAFGIRNF 141
Query: 146 SSPSTGVAEISRVLRPGGVFV 166
G++E+ RVL+PGG V
Sbjct: 142 EDLDKGLSEMCRVLKPGGHLV 162
>sp|P67055|UBIE_LISMO Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=ubiE PE=3
SV=1
Length = 237
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 62 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120
G N++D CG+ +S + A+ G V LD+SENMLK E V++ N L+
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD---LHNVELIH 104
Query: 121 ADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163
+ LPF +S D V G + + E+ RVL+PGG
Sbjct: 105 GNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|Q71Y84|UBIE_LISMF Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=ubiE PE=3 SV=1
Length = 237
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 62 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120
G N++D CG+ +S + A+ G V LD+SENMLK E V++ N L+
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD---LHNVELIH 104
Query: 121 ADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163
+ LPF +S D V G + + E+ RVL+PGG
Sbjct: 105 GNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|C1KWN1|UBIE_LISMC Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain CLIP80459) GN=ubiE PE=3 SV=1
Length = 237
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 62 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120
G N++D CG+ +S + A+ G V LD+SENMLK E V++ N L+
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD---LHNVELIH 104
Query: 121 ADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163
+ LPF +S D V G + + E+ RVL+PGG
Sbjct: 105 GNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|P67056|UBIE_LISIN Demethylmenaquinone methyltransferase OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=ubiE PE=3 SV=1
Length = 237
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 62 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120
G N++D CG+ +S + A+ G V LD+SENMLK E V++ N L+
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD---LHNVELIH 104
Query: 121 ADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163
+ LPF +S D V G + + E+ RVL+PGG
Sbjct: 105 GNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|C4LL93|UBIE_CORK4 Demethylmenaquinone methyltransferase OS=Corynebacterium
kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=ubiE
PE=3 SV=1
Length = 229
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 57 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENF 116
L P G ++D + G+G+ + +KSG +LVV D+S MLK + N P
Sbjct: 47 LDPKPGEKVVDLAAGTGVSTAELSKSG--ALVVGCDFSLGMLK-----AGRHRNVP---- 95
Query: 117 LLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163
LV D LPFA ++ DA + + + G+ EI+RV++PGG
Sbjct: 96 -LVAGDGLNLPFADNTFDAATISFGLRNFGDTAAGLREIARVVKPGG 141
>sp|A0AK43|UBIE_LISW6 Demethylmenaquinone methyltransferase OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=ubiE PE=3 SV=1
Length = 236
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 62 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120
G N++D CG+ +S + A+ G V LD+SENMLK E V++ N L+
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD---LHNVELIH 104
Query: 121 ADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163
+ LPF +S D V G + + E+ RVL+PGG
Sbjct: 105 GNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|Q50464|PHMT_MYCTU Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium tuberculosis GN=Rv2952 PE=1 SV=1
Length = 270
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G +++ SCG G + ++ + LD ++ +K C ++ P +F VR
Sbjct: 81 GKQVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLC----KKRHRLPGLDF--VRG 134
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVF 165
D LPF S D V A HC+ +AE+ RVLRPGG F
Sbjct: 135 DAENLPFDDESFDVVLNVEASHCYPHFRRFLAEVVRVLRPGGYF 178
>sp|A5U6W0|PHMT_MYCTA Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium tuberculosis (strain ATCC 25177 /
H37Ra) GN=MRA_2979 PE=3 SV=1
Length = 270
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G +++ SCG G + ++ + LD ++ +K C ++ P +F VR
Sbjct: 81 GKQVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLC----KKRHRLPGLDF--VRG 134
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVF 165
D LPF S D V A HC+ +AE+ RVLRPGG F
Sbjct: 135 DAENLPFDDESFDVVLNVEASHCYPHFRRFLAEVVRVLRPGGYF 178
>sp|A1KMU6|PHMT_MYCBP Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2)
GN=BCG_2973 PE=3 SV=1
Length = 270
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G +++ SCG G + ++ + LD ++ +K C ++ P +F VR
Sbjct: 81 GKQVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLC----KKRHRLPGLDF--VRG 134
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVF 165
D LPF S D V A HC+ +AE+ RVLRPGG F
Sbjct: 135 DAENLPFDDESFDVVLNVEASHCYPHFRRFLAEVVRVLRPGGYF 178
>sp|Q7TXK3|PHMT_MYCBO Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=Mb2976 PE=3 SV=1
Length = 270
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G +++ SCG G + ++ + LD ++ +K C ++ P +F VR
Sbjct: 81 GKQVLEVSCGHGGGASYLTRTLHPASYTGLDLNQAGIKLC----KKRHRLPGLDF--VRG 134
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVF 165
D LPF S D V A HC+ +AE+ RVLRPGG F
Sbjct: 135 DAENLPFDDESFDVVLNVEASHCYPHFRRFLAEVVRVLRPGGYF 178
>sp|O66128|UBIE_MICLU Demethylmenaquinone methyltransferase OS=Micrococcus luteus GN=ubiE
PE=3 SV=1
Length = 246
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 62 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120
G +D CG+G ++ A++ G V+ LD+SENML V Q +N L+
Sbjct: 59 GSKALDVCCGTGDWTIQMAQAVGKNGHVIGLDFSENMLS-----VAQGKTNHIQNIELIH 113
Query: 121 ADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFV 166
+ LPF + D G + G+ E+ RVL+PGG+ V
Sbjct: 114 GNAMELPFEDNIFDYTTIGFGLRNLPDYKKGLEEMYRVLKPGGMIV 159
>sp|A0PQ29|PHMT2_MYCUA Probable phthiotriol/phenolphthiotriol dimycocerosates
methyltransferase 2 OS=Mycobacterium ulcerans (strain
Agy99) GN=MUL_2009 PE=3 SV=1
Length = 258
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G +++ SCG G + ++ + ALD + +K F QQ + P +F V+
Sbjct: 81 GKRVLEVSCGHGGGASYLTRTLGPASYTALDLNPAGIK----FCQQRHHLPGLDF--VQG 134
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFV 166
D LPF S D V A HC+ + E+ RVLRPGG F
Sbjct: 135 DAEDLPFEDESFDVVLNVEASHCYPRFPVFLEEVKRVLRPGGYFA 179
>sp|D8MPW4|BIOC_ERWBE Malonyl-CoA O-methyltransferase BioC OS=Erwinia billingiae (strain
Eb661) GN=bioC PE=3 SV=1
Length = 251
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN 110
E + Y G ++DA CG G FS+ + +G + V ALD S ML Q +
Sbjct: 32 EELASYATRRQGQKVLDAGCGPGWFSQHWRAAG--NHVTALDLSAEMLVQAQALHTADCY 89
Query: 111 FPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170
P DI LPF+ +S D + A+ S S + E+ RV PGG + +T
Sbjct: 90 QP--------GDIEALPFSDASFDLCWSNLAVQWCSDLSLALTELYRVTSPGGQVLFSTL 141
Query: 171 IVDGPFNL 178
D L
Sbjct: 142 SADSLHEL 149
>sp|P12999|BIOC_ECOLI Malonyl-CoA O-methyltransferase BioC OS=Escherichia coli (strain
K12) GN=bioC PE=1 SV=2
Length = 251
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 64 NIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123
+++DA CG G SR + + + V ALD S ML VQ +++L DI
Sbjct: 45 HVLDAGCGPGWMSRHWRER--HAQVTALDLSPPML------VQARQKDAADHYLA--GDI 94
Query: 124 SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171
LP A+++ D + A+ + ST + E+ RV+RP GV TT +
Sbjct: 95 ESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLV 142
>sp|B8DBZ5|UBIE_LISMH Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4a (strain HCC23) GN=ubiE PE=3 SV=1
Length = 237
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 62 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120
G N++D CG+ +S + A+ G V LD+SENMLK E V + N L+
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVTEAD---LHNVELIH 104
Query: 121 ADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163
+ LPF +S D V G + + E+ RVL+PGG
Sbjct: 105 GNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGG 147
>sp|Q8ZQQ6|BIOC_SALTY Malonyl-CoA O-methyltransferase BioC OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=bioC PE=3 SV=1
Length = 251
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 63 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122
+++DA CG G SR + + G S V ALD S ML+Q + ++LL AD
Sbjct: 44 ASVLDAGCGPGRMSRYWRERG--SEVTALDLSLPMLQQARD------RQAAHHYLL--AD 93
Query: 123 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 182
I +P + D + A+ ++E+ RV+RPGGV TT + G +P
Sbjct: 94 IEAIPHDAEVFDLAWSNLAVQWCGDLRDALSELYRVVRPGGVVAFTT-LCQGS---LPEL 149
Query: 183 RLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR 220
R Q + + + +FL E I+ R G F+ T+
Sbjct: 150 RQAWQAVDNRAHANSFLPEEAIDHALR--GWRAFRHTQ 185
>sp|P36571|BIOC_SERMA Malonyl-CoA O-methyltransferase BioC OS=Serratia marcescens GN=bioC
PE=1 SV=1
Length = 255
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121
G ++DA CG+G FSR++ + G V ALD + ML + +Q ++LL
Sbjct: 47 GEQLLDAGCGTGYFSRMWRERG--KRVTALDLAPGML----DVARQRQ--AAHHYLL--G 96
Query: 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169
DI ++P +++D + + S +AE+ RV RPGGV + +T
Sbjct: 97 DIEQVPLPDAAMDICFSSLVVQWCSDLPAALAELYRVTRPGGVILFST 144
>sp|Q49XS5|UBIE_STAS1 Demethylmenaquinone methyltransferase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=ubiE PE=3 SV=1
Length = 233
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 50 FELMKGYLKPVL-------GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQC 101
FE K + K V+ G +D CG+ ++ +K+ G V+ +D+SENML+
Sbjct: 31 FEQHKTWRKRVMKEMNVKSGSKALDVCCGTADWTISLSKAVGHTGEVIGVDFSENMLE-- 88
Query: 102 YEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRP 161
V + N LV D LPF + D V G + + E++RVL+P
Sbjct: 89 ---VGKRKTKDMHNIQLVHGDAMNLPFEDNEFDYVTIGFGLRNVPDYLATLKELNRVLKP 145
Query: 162 GGVFV 166
GG+ V
Sbjct: 146 GGMIV 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,142,733
Number of Sequences: 539616
Number of extensions: 3612942
Number of successful extensions: 12144
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 596
Number of HSP's that attempted gapping in prelim test: 11741
Number of HSP's gapped (non-prelim): 773
length of query: 235
length of database: 191,569,459
effective HSP length: 114
effective length of query: 121
effective length of database: 130,053,235
effective search space: 15736441435
effective search space used: 15736441435
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 59 (27.3 bits)