Query 026688
Match_columns 235
No_of_seqs 182 out of 1541
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 19:40:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 100.0 2.6E-26 8.8E-31 177.0 21.5 188 43-234 50-259 (261)
2 3dlc_A Putative S-adenosyl-L-m 99.9 1.8E-25 6.2E-30 168.2 17.5 179 47-234 30-216 (219)
3 3dh0_A SAM dependent methyltra 99.9 6.6E-25 2.3E-29 165.3 19.9 166 51-233 27-194 (219)
4 3dtn_A Putative methyltransfer 99.9 1.2E-24 4E-29 165.6 20.2 183 46-234 28-228 (234)
5 3bus_A REBM, methyltransferase 99.9 2.2E-24 7.6E-29 167.7 21.2 169 48-221 48-216 (273)
6 1vl5_A Unknown conserved prote 99.9 6.3E-25 2.2E-29 169.7 17.9 166 47-221 23-190 (260)
7 3hnr_A Probable methyltransfer 99.9 4.1E-25 1.4E-29 166.6 15.9 173 51-233 35-213 (220)
8 2o57_A Putative sarcosine dime 99.9 1.6E-24 5.6E-29 170.5 19.3 166 47-220 64-233 (297)
9 1xxl_A YCGJ protein; structura 99.9 6.6E-24 2.2E-28 162.0 19.3 166 47-221 7-174 (239)
10 1nkv_A Hypothetical protein YJ 99.9 4.2E-24 1.4E-28 164.6 17.6 168 44-220 19-186 (256)
11 3kkz_A Uncharacterized protein 99.9 1.1E-23 3.7E-28 163.4 20.0 169 44-222 28-197 (267)
12 3f4k_A Putative methyltransfer 99.9 1.3E-23 4.3E-28 162.1 20.1 169 44-222 28-197 (257)
13 3mcz_A O-methyltransferase; ad 99.9 3E-23 1E-27 167.1 20.5 179 52-235 169-352 (352)
14 3ujc_A Phosphoethanolamine N-m 99.9 1E-23 3.6E-28 163.2 16.9 167 44-221 38-206 (266)
15 3g5l_A Putative S-adenosylmeth 99.9 1.9E-23 6.6E-28 160.7 17.8 177 50-233 33-246 (253)
16 3mgg_A Methyltransferase; NYSG 99.9 3.3E-23 1.1E-27 161.4 18.4 171 48-221 24-198 (276)
17 4htf_A S-adenosylmethionine-de 99.9 1.9E-23 6.6E-28 163.5 16.1 164 52-220 60-231 (285)
18 3ocj_A Putative exported prote 99.9 4.7E-23 1.6E-27 162.8 18.2 171 60-233 117-305 (305)
19 3vc1_A Geranyl diphosphate 2-C 99.9 9.9E-23 3.4E-27 161.4 19.6 162 51-221 106-269 (312)
20 1x19_A CRTF-related protein; m 99.9 2.8E-22 9.6E-27 161.8 21.7 177 49-232 178-359 (359)
21 3l8d_A Methyltransferase; stru 99.9 6.6E-23 2.2E-27 156.6 17.0 159 46-219 40-198 (242)
22 2p7i_A Hypothetical protein; p 99.9 2.1E-23 7.1E-28 159.9 13.6 146 61-219 42-197 (250)
23 3jwh_A HEN1; methyltransferase 99.9 2.6E-23 8.8E-28 156.5 13.7 168 46-218 14-189 (217)
24 3h2b_A SAM-dependent methyltra 99.9 1E-22 3.4E-27 151.6 16.6 140 62-222 42-183 (203)
25 3lcc_A Putative methyl chlorid 99.9 3E-23 1E-27 158.0 14.0 153 47-221 53-207 (235)
26 3gwz_A MMCR; methyltransferase 99.9 3.8E-22 1.3E-26 161.5 21.1 173 51-231 192-368 (369)
27 3ccf_A Cyclopropane-fatty-acyl 99.9 6.5E-23 2.2E-27 160.0 15.6 157 51-221 47-210 (279)
28 3jwg_A HEN1, methyltransferase 99.9 5.6E-23 1.9E-27 154.8 14.7 167 47-218 15-189 (219)
29 1y8c_A S-adenosylmethionine-de 99.9 2.3E-22 7.7E-27 153.9 17.8 179 48-233 22-246 (246)
30 3e23_A Uncharacterized protein 99.9 4.3E-22 1.5E-26 149.1 18.4 147 47-219 31-180 (211)
31 2p35_A Trans-aconitate 2-methy 99.9 2.6E-22 8.8E-27 154.8 17.5 159 47-215 19-184 (259)
32 2r3s_A Uncharacterized protein 99.9 5.3E-22 1.8E-26 158.7 19.5 178 50-232 152-335 (335)
33 3pfg_A N-methyltransferase; N, 99.9 1.4E-22 4.9E-27 156.7 15.6 161 62-233 51-250 (263)
34 3sm3_A SAM-dependent methyltra 99.9 2E-22 7E-27 153.1 15.8 162 52-219 23-205 (235)
35 1xtp_A LMAJ004091AAA; SGPP, st 99.9 2.7E-22 9.2E-27 154.3 16.4 155 51-222 83-239 (254)
36 3ou2_A SAM-dependent methyltra 99.9 4.8E-22 1.6E-26 149.4 17.3 170 51-230 35-214 (218)
37 3hem_A Cyclopropane-fatty-acyl 99.9 1.6E-21 5.4E-26 153.9 20.9 168 49-222 60-244 (302)
38 4a6d_A Hydroxyindole O-methylt 99.9 1.6E-21 5.5E-26 156.8 21.1 177 51-234 169-348 (353)
39 1kpg_A CFA synthase;, cyclopro 99.9 1.3E-21 4.5E-26 153.2 20.0 167 49-221 52-228 (287)
40 2yqz_A Hypothetical protein TT 99.9 7.9E-22 2.7E-26 152.4 18.1 156 58-220 36-195 (263)
41 3i53_A O-methyltransferase; CO 99.9 3.8E-22 1.3E-26 159.4 16.8 164 58-231 166-331 (332)
42 1pjz_A Thiopurine S-methyltran 99.9 1.8E-22 6.1E-27 150.3 13.7 156 47-220 8-175 (203)
43 3i9f_A Putative type 11 methyl 99.9 1.2E-22 4.1E-27 147.0 12.3 149 55-232 11-160 (170)
44 3bkw_A MLL3908 protein, S-aden 99.9 2.3E-21 7.8E-26 148.1 20.0 163 51-220 33-213 (243)
45 1qzz_A RDMB, aclacinomycin-10- 99.9 1.4E-21 4.8E-26 158.6 19.2 176 51-233 172-357 (374)
46 2a14_A Indolethylamine N-methy 99.9 1.4E-22 4.8E-27 156.8 12.6 165 58-234 52-262 (263)
47 3dli_A Methyltransferase; PSI- 99.9 7.9E-22 2.7E-26 150.6 16.4 155 47-222 26-185 (240)
48 2aot_A HMT, histamine N-methyl 99.9 6.1E-22 2.1E-26 155.5 16.1 153 60-219 51-219 (292)
49 2xvm_A Tellurite resistance pr 99.9 1.8E-21 6.1E-26 144.2 17.7 147 52-219 23-171 (199)
50 3dp7_A SAM-dependent methyltra 99.9 1E-21 3.5E-26 158.6 17.5 168 61-232 179-355 (363)
51 2ex4_A Adrenal gland protein A 99.9 8E-22 2.7E-26 150.6 16.0 145 61-221 79-225 (241)
52 1tw3_A COMT, carminomycin 4-O- 99.9 1.6E-21 5.4E-26 157.5 18.4 176 52-234 174-358 (360)
53 2ip2_A Probable phenazine-spec 99.9 1.6E-21 5.4E-26 155.9 18.0 175 49-231 156-333 (334)
54 3gu3_A Methyltransferase; alph 99.9 2.1E-21 7.3E-26 151.8 18.3 171 47-222 7-191 (284)
55 3bkx_A SAM-dependent methyltra 99.9 2E-21 6.9E-26 151.2 18.0 171 49-221 31-219 (275)
56 3ege_A Putative methyltransfer 99.9 6.1E-22 2.1E-26 153.0 14.1 158 46-221 19-178 (261)
57 2i62_A Nicotinamide N-methyltr 99.9 7.6E-22 2.6E-26 152.7 14.6 165 58-234 53-263 (265)
58 3d2l_A SAM-dependent methyltra 99.9 4.6E-21 1.6E-25 146.4 18.2 176 47-232 21-243 (243)
59 3g2m_A PCZA361.24; SAM-depende 99.9 1.3E-21 4.5E-26 154.1 15.5 173 46-222 68-275 (299)
60 1vlm_A SAM-dependent methyltra 99.9 7.5E-21 2.6E-25 143.2 18.8 137 62-219 48-186 (219)
61 4fsd_A Arsenic methyltransfera 99.9 2.2E-21 7.5E-26 157.7 16.3 156 60-219 82-249 (383)
62 2fk8_A Methoxy mycolic acid sy 99.9 6E-21 2.1E-25 151.6 18.2 166 49-220 78-253 (318)
63 3e8s_A Putative SAM dependent 99.9 5.9E-22 2E-26 149.7 11.8 169 51-232 42-227 (227)
64 3bxo_A N,N-dimethyltransferase 99.9 2.7E-21 9.3E-26 147.3 15.5 169 51-232 32-239 (239)
65 3g5t_A Trans-aconitate 3-methy 99.9 5.4E-21 1.9E-25 150.5 17.5 161 46-213 22-196 (299)
66 2gb4_A Thiopurine S-methyltran 99.9 5E-21 1.7E-25 146.7 16.6 153 49-219 56-225 (252)
67 1ve3_A Hypothetical protein PH 99.9 4.9E-21 1.7E-25 144.8 16.3 174 49-231 28-225 (227)
68 4e2x_A TCAB9; kijanose, tetron 99.9 3.4E-22 1.2E-26 164.4 10.4 171 47-231 93-267 (416)
69 4hg2_A Methyltransferase type 99.9 2.4E-21 8.1E-26 148.8 14.0 114 46-173 26-139 (257)
70 3lst_A CALO1 methyltransferase 99.9 3.9E-21 1.3E-25 154.4 15.7 169 52-230 175-346 (348)
71 3reo_A (ISO)eugenol O-methyltr 99.9 2.2E-20 7.5E-25 151.0 19.8 168 52-232 193-367 (368)
72 3thr_A Glycine N-methyltransfe 99.9 1.5E-20 5.3E-25 147.5 18.2 125 46-172 42-178 (293)
73 3e05_A Precorrin-6Y C5,15-meth 99.9 1.6E-19 5.3E-24 134.4 22.3 137 46-214 25-161 (204)
74 2kw5_A SLR1183 protein; struct 99.9 2.2E-21 7.5E-26 144.2 11.1 150 49-219 20-169 (202)
75 3g07_A 7SK snRNA methylphospha 99.9 1.7E-21 5.9E-26 152.8 10.9 154 61-219 46-267 (292)
76 1fp1_D Isoliquiritigenin 2'-O- 99.9 2.1E-20 7.1E-25 151.5 17.0 166 52-231 199-372 (372)
77 3cc8_A Putative methyltransfer 99.9 3.4E-20 1.2E-24 140.3 16.5 154 51-220 23-184 (230)
78 3p9c_A Caffeic acid O-methyltr 99.9 6E-20 2.1E-24 148.2 18.7 167 52-231 191-364 (364)
79 2gs9_A Hypothetical protein TT 99.9 3.5E-20 1.2E-24 138.6 16.1 133 61-212 36-171 (211)
80 3cgg_A SAM-dependent methyltra 99.9 9.8E-20 3.3E-24 134.2 18.1 138 61-232 46-195 (195)
81 2qe6_A Uncharacterized protein 99.8 6.1E-20 2.1E-24 142.5 17.5 155 52-217 67-238 (274)
82 1wzn_A SAM-dependent methyltra 99.8 1.4E-19 4.7E-24 139.0 18.5 176 50-233 30-251 (252)
83 1fbn_A MJ fibrillarin homologu 99.8 1.4E-19 4.7E-24 137.3 18.0 160 46-233 56-229 (230)
84 2g72_A Phenylethanolamine N-me 99.8 1.6E-20 5.5E-25 147.1 12.5 158 51-220 59-255 (289)
85 1ri5_A MRNA capping enzyme; me 99.8 1.1E-19 3.8E-24 142.8 16.8 152 60-220 63-249 (298)
86 3grz_A L11 mtase, ribosomal pr 99.8 1.4E-19 4.6E-24 134.9 16.2 138 60-232 59-196 (205)
87 3m70_A Tellurite resistance pr 99.8 1.2E-19 4.3E-24 141.9 16.6 137 61-219 120-258 (286)
88 3njr_A Precorrin-6Y methylase; 99.8 1.6E-18 5.5E-23 128.9 20.9 139 46-219 40-178 (204)
89 2p8j_A S-adenosylmethionine-de 99.8 2.1E-20 7E-25 139.6 10.6 153 60-218 22-180 (209)
90 1fp2_A Isoflavone O-methyltran 99.8 1.1E-19 3.8E-24 146.2 15.2 156 61-230 188-351 (352)
91 3ofk_A Nodulation protein S; N 99.8 7.1E-20 2.4E-24 137.4 13.0 116 49-172 39-157 (216)
92 3hm2_A Precorrin-6Y C5,15-meth 99.8 5.7E-19 1.9E-23 128.4 17.2 140 46-218 10-150 (178)
93 3ggd_A SAM-dependent methyltra 99.8 2.1E-19 7.3E-24 137.4 14.5 146 60-219 55-217 (245)
94 1dus_A MJ0882; hypothetical pr 99.8 1.2E-18 4E-23 128.3 17.9 153 48-231 39-193 (194)
95 3orh_A Guanidinoacetate N-meth 99.8 2.6E-20 9E-25 141.7 8.9 152 49-218 49-207 (236)
96 1l3i_A Precorrin-6Y methyltran 99.8 8.8E-19 3E-23 128.8 16.6 137 45-215 17-154 (192)
97 2vdw_A Vaccinia virus capping 99.8 3.6E-19 1.2E-23 139.9 14.5 159 61-220 48-245 (302)
98 2nxc_A L11 mtase, ribosomal pr 99.8 8.2E-19 2.8E-23 134.8 15.9 136 60-231 119-254 (254)
99 1zg3_A Isoflavanone 4'-O-methy 99.8 4.5E-19 1.6E-23 142.9 14.2 157 61-230 193-357 (358)
100 2b3t_A Protein methyltransfera 99.8 1.9E-18 6.5E-23 134.5 16.9 156 44-231 93-275 (276)
101 1zx0_A Guanidinoacetate N-meth 99.8 9.7E-20 3.3E-24 138.6 9.0 117 48-171 48-172 (236)
102 3q87_B N6 adenine specific DNA 99.8 4E-18 1.4E-22 123.2 16.7 117 60-219 22-147 (170)
103 1yb2_A Hypothetical protein TA 99.8 8.7E-19 3E-23 136.3 14.0 135 50-219 99-235 (275)
104 3htx_A HEN1; HEN1, small RNA m 99.8 6.2E-19 2.1E-23 151.1 14.1 167 48-219 708-896 (950)
105 3mq2_A 16S rRNA methyltransfer 99.8 3E-19 1E-23 134.2 10.9 154 55-220 21-183 (218)
106 2yxd_A Probable cobalt-precorr 99.8 1E-17 3.5E-22 122.2 18.8 137 44-218 18-154 (183)
107 2pxx_A Uncharacterized protein 99.8 1.5E-18 5E-23 130.0 14.6 118 47-172 30-162 (215)
108 2avn_A Ubiquinone/menaquinone 99.8 1.3E-18 4.4E-23 134.3 14.3 154 50-219 45-211 (260)
109 1yzh_A TRNA (guanine-N(7)-)-me 99.8 4E-18 1.4E-22 127.7 16.4 107 61-170 41-157 (214)
110 4df3_A Fibrillarin-like rRNA/T 99.8 8.2E-18 2.8E-22 126.2 17.9 161 46-230 59-230 (233)
111 3fzg_A 16S rRNA methylase; met 99.8 8.1E-19 2.8E-23 126.1 11.4 164 44-231 34-197 (200)
112 1xdz_A Methyltransferase GIDB; 99.8 2.4E-18 8.2E-23 131.2 14.6 129 60-219 69-200 (240)
113 2pwy_A TRNA (adenine-N(1)-)-me 99.8 5.5E-18 1.9E-22 130.5 16.7 142 44-219 79-222 (258)
114 3mb5_A SAM-dependent methyltra 99.8 3.6E-18 1.2E-22 131.3 15.7 143 43-219 75-220 (255)
115 3m33_A Uncharacterized protein 99.8 2.2E-18 7.5E-23 130.3 14.1 133 44-220 32-166 (226)
116 2zfu_A Nucleomethylin, cerebra 99.8 2.4E-18 8.4E-23 129.0 14.1 126 60-233 66-192 (215)
117 3lpm_A Putative methyltransfer 99.8 8.3E-18 2.8E-22 129.7 17.0 140 50-219 37-199 (259)
118 3evz_A Methyltransferase; NYSG 99.8 2E-17 6.8E-22 125.2 18.8 131 59-219 53-204 (230)
119 4dzr_A Protein-(glutamine-N5) 99.8 2.1E-19 7.1E-24 134.5 7.7 155 47-232 15-205 (215)
120 3giw_A Protein of unknown func 99.8 3.2E-18 1.1E-22 130.8 13.6 149 61-217 78-243 (277)
121 2fca_A TRNA (guanine-N(7)-)-me 99.8 5.9E-18 2E-22 126.7 14.7 107 61-170 38-154 (213)
122 3fpf_A Mtnas, putative unchara 99.8 1.1E-17 3.8E-22 129.3 15.7 109 55-171 116-224 (298)
123 1nt2_A Fibrillarin-like PRE-rR 99.8 1.8E-17 6.1E-22 123.7 16.3 144 58-231 54-209 (210)
124 3mti_A RRNA methylase; SAM-dep 99.8 8.2E-18 2.8E-22 123.2 13.9 108 60-172 21-138 (185)
125 3bgv_A MRNA CAP guanine-N7 met 99.8 1.1E-17 3.9E-22 132.4 15.6 153 61-220 34-231 (313)
126 3eey_A Putative rRNA methylase 99.8 2.6E-18 8.7E-23 127.1 11.1 111 60-172 21-142 (197)
127 3p9n_A Possible methyltransfer 99.8 6.6E-18 2.2E-22 124.1 12.5 126 44-173 24-157 (189)
128 1jsx_A Glucose-inhibited divis 99.8 8.3E-18 2.8E-22 125.3 13.2 115 47-169 48-165 (207)
129 1o54_A SAM-dependent O-methylt 99.8 1.8E-17 6.3E-22 128.9 15.7 140 46-219 97-237 (277)
130 3p2e_A 16S rRNA methylase; met 99.8 2.4E-18 8.1E-23 129.8 10.0 153 60-222 23-186 (225)
131 2ld4_A Anamorsin; methyltransf 99.8 7.7E-18 2.6E-22 122.3 12.0 117 57-213 8-128 (176)
132 2ipx_A RRNA 2'-O-methyltransfe 99.8 2.7E-17 9.2E-22 124.8 15.4 153 56-232 72-232 (233)
133 3lbf_A Protein-L-isoaspartate 99.8 3.5E-17 1.2E-21 122.2 15.8 115 46-171 62-176 (210)
134 3lec_A NADB-rossmann superfami 99.8 6.5E-17 2.2E-21 120.9 16.2 137 49-219 11-147 (230)
135 4dcm_A Ribosomal RNA large sub 99.7 6.9E-17 2.4E-21 130.4 17.3 124 47-171 208-336 (375)
136 3iv6_A Putative Zn-dependent a 99.7 2.1E-17 7.2E-22 126.5 13.1 117 48-171 32-150 (261)
137 2frn_A Hypothetical protein PH 99.7 1.1E-16 3.8E-21 124.5 17.2 140 48-217 114-253 (278)
138 3id6_C Fibrillarin-like rRNA/T 99.7 2.3E-16 7.7E-21 118.7 18.1 162 46-232 58-231 (232)
139 3bwc_A Spermidine synthase; SA 99.7 4E-17 1.4E-21 128.4 14.3 151 60-232 94-258 (304)
140 1g8a_A Fibrillarin-like PRE-rR 99.7 2.2E-16 7.4E-21 119.3 17.9 160 46-231 55-226 (227)
141 2ozv_A Hypothetical protein AT 99.7 1.3E-16 4.4E-21 123.0 16.8 117 52-170 27-171 (260)
142 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.5E-17 5E-22 124.9 11.0 108 61-171 34-152 (218)
143 3g89_A Ribosomal RNA small sub 99.7 7.2E-17 2.5E-21 123.5 14.4 129 60-219 79-210 (249)
144 1i9g_A Hypothetical protein RV 99.7 1.5E-16 5.3E-21 123.9 16.3 120 45-171 83-205 (280)
145 3kr9_A SAM-dependent methyltra 99.7 1.8E-16 6.3E-21 118.3 15.9 135 50-219 6-141 (225)
146 2yxe_A Protein-L-isoaspartate 99.7 1.3E-16 4.4E-21 119.5 15.1 118 46-172 62-180 (215)
147 3gnl_A Uncharacterized protein 99.7 1.3E-16 4.6E-21 120.2 14.8 137 49-219 11-147 (244)
148 2b25_A Hypothetical protein; s 99.7 7.8E-17 2.7E-21 128.8 13.4 122 45-171 89-221 (336)
149 2ift_A Putative methylase HI07 99.7 2.5E-17 8.5E-22 122.2 9.7 125 45-172 36-166 (201)
150 3dmg_A Probable ribosomal RNA 99.7 3.1E-16 1E-20 126.8 16.6 118 48-171 218-342 (381)
151 1dl5_A Protein-L-isoaspartate 99.7 1.3E-16 4.6E-21 126.4 13.8 118 46-172 60-178 (317)
152 2pjd_A Ribosomal RNA small sub 99.7 1.7E-16 5.9E-21 127.0 14.5 119 47-171 182-305 (343)
153 1vbf_A 231AA long hypothetical 99.7 3E-16 1E-20 118.8 15.1 114 46-172 55-168 (231)
154 3tfw_A Putative O-methyltransf 99.7 7.6E-16 2.6E-20 117.9 17.4 117 51-172 53-173 (248)
155 2esr_A Methyltransferase; stru 99.7 3.3E-17 1.1E-21 119.0 9.3 124 46-173 15-142 (177)
156 2fyt_A Protein arginine N-meth 99.7 1.3E-16 4.5E-21 127.4 13.4 112 51-166 54-168 (340)
157 3bzb_A Uncharacterized protein 99.7 3.3E-16 1.1E-20 122.0 15.2 126 44-170 62-206 (281)
158 3uwp_A Histone-lysine N-methyl 99.7 4.8E-17 1.7E-21 130.3 10.3 125 47-173 159-292 (438)
159 3u81_A Catechol O-methyltransf 99.7 1.9E-16 6.4E-21 119.2 13.0 122 48-172 45-173 (221)
160 3q7e_A Protein arginine N-meth 99.7 1.1E-16 3.7E-21 128.4 12.3 108 59-170 64-174 (349)
161 3ckk_A TRNA (guanine-N(7)-)-me 99.7 1.2E-16 4.1E-21 121.2 11.6 112 60-171 45-170 (235)
162 2fpo_A Methylase YHHF; structu 99.7 1.3E-16 4.3E-21 118.5 11.4 124 44-172 36-163 (202)
163 2fhp_A Methylase, putative; al 99.7 1.8E-16 6E-21 116.1 11.7 126 44-173 26-158 (187)
164 1ws6_A Methyltransferase; stru 99.7 5.2E-17 1.8E-21 117.2 8.4 122 44-173 22-151 (171)
165 3r0q_C Probable protein argini 99.7 2.4E-16 8.3E-21 127.6 13.2 118 49-171 51-171 (376)
166 3tma_A Methyltransferase; thum 99.7 8.5E-16 2.9E-20 123.6 16.1 127 42-171 184-319 (354)
167 3ntv_A MW1564 protein; rossman 99.7 1.5E-16 5.1E-21 120.6 11.0 120 47-171 57-178 (232)
168 1ixk_A Methyltransferase; open 99.7 5.1E-16 1.7E-20 122.8 14.2 123 47-172 104-249 (315)
169 2h00_A Methyltransferase 10 do 99.7 2E-16 6.9E-21 121.5 11.1 147 61-219 65-236 (254)
170 1jg1_A PIMT;, protein-L-isoasp 99.7 7.4E-16 2.5E-20 117.0 13.8 116 46-172 76-192 (235)
171 1nv8_A HEMK protein; class I a 99.7 5.1E-16 1.7E-20 121.0 13.2 121 44-169 106-249 (284)
172 3dr5_A Putative O-methyltransf 99.7 3.8E-16 1.3E-20 117.4 12.1 118 49-171 44-165 (221)
173 3tm4_A TRNA (guanine N2-)-meth 99.7 4.1E-15 1.4E-19 120.3 18.5 142 44-219 201-350 (373)
174 3duw_A OMT, O-methyltransferas 99.7 2.3E-15 7.8E-20 113.4 15.2 120 48-172 45-170 (223)
175 3gdh_A Trimethylguanosine synt 99.7 1E-17 3.4E-22 127.8 2.2 154 47-219 63-217 (241)
176 2yvl_A TRMI protein, hypotheti 99.7 3.7E-15 1.3E-19 113.9 16.4 116 47-171 77-192 (248)
177 3opn_A Putative hemolysin; str 99.7 2.2E-17 7.4E-22 124.9 3.8 158 50-220 25-183 (232)
178 1ej0_A FTSJ; methyltransferase 99.7 1.4E-15 4.7E-20 110.2 13.2 100 59-172 20-139 (180)
179 1af7_A Chemotaxis receptor met 99.7 3.1E-16 1.1E-20 121.0 10.0 107 61-167 105-250 (274)
180 1g6q_1 HnRNP arginine N-methyl 99.7 6.8E-16 2.3E-20 122.8 12.3 112 52-167 29-143 (328)
181 2y1w_A Histone-arginine methyl 99.7 7.1E-16 2.4E-20 123.7 12.5 118 49-171 38-157 (348)
182 2gpy_A O-methyltransferase; st 99.7 4.6E-16 1.6E-20 118.0 10.8 121 46-171 39-162 (233)
183 1o9g_A RRNA methyltransferase; 99.7 3E-16 1E-20 120.3 9.9 122 48-171 38-216 (250)
184 3r3h_A O-methyltransferase, SA 99.7 2.7E-16 9.1E-21 119.9 9.1 121 47-172 46-173 (242)
185 1p91_A Ribosomal RNA large sub 99.7 2.2E-15 7.5E-20 116.7 14.2 99 60-173 84-182 (269)
186 3hp7_A Hemolysin, putative; st 99.7 8.3E-16 2.8E-20 119.0 11.6 154 50-220 73-231 (291)
187 3lcv_B Sisomicin-gentamicin re 99.7 2.9E-15 9.9E-20 112.6 14.0 160 46-230 119-280 (281)
188 1u2z_A Histone-lysine N-methyl 99.7 1.1E-15 3.8E-20 124.6 12.5 124 47-172 228-362 (433)
189 2vdv_E TRNA (guanine-N(7)-)-me 99.7 1E-15 3.6E-20 117.0 11.7 102 61-170 49-174 (246)
190 3adn_A Spermidine synthase; am 99.7 4.9E-15 1.7E-19 115.7 15.6 111 61-171 83-200 (294)
191 2igt_A SAM dependent methyltra 99.6 1.9E-15 6.4E-20 120.1 12.8 126 43-171 134-274 (332)
192 1i1n_A Protein-L-isoaspartate 99.6 5.4E-15 1.8E-19 111.5 14.6 119 48-172 62-185 (226)
193 4azs_A Methyltransferase WBDD; 99.6 1.3E-16 4.4E-21 135.8 6.1 106 62-172 67-176 (569)
194 3c3p_A Methyltransferase; NP_9 99.6 8.6E-16 3E-20 114.6 9.3 105 61-171 56-162 (210)
195 3tr6_A O-methyltransferase; ce 99.6 7E-16 2.4E-20 116.3 8.9 118 50-172 53-177 (225)
196 3a27_A TYW2, uncharacterized p 99.6 6E-15 2E-19 114.3 14.2 106 59-172 117-222 (272)
197 3gjy_A Spermidine synthase; AP 99.6 3.2E-15 1.1E-19 117.0 12.5 107 62-171 90-202 (317)
198 2pbf_A Protein-L-isoaspartate 99.6 5.5E-15 1.9E-19 111.5 13.1 118 48-171 65-195 (227)
199 1sui_A Caffeoyl-COA O-methyltr 99.6 2E-15 6.9E-20 115.4 10.1 110 57-171 75-192 (247)
200 1iy9_A Spermidine synthase; ro 99.6 1.3E-14 4.3E-19 112.6 14.5 109 61-170 75-190 (275)
201 2yxl_A PH0851 protein, 450AA l 99.6 1.6E-14 5.4E-19 119.6 15.5 123 48-173 246-393 (450)
202 3b3j_A Histone-arginine methyl 99.6 3.9E-15 1.3E-19 123.7 11.9 115 50-169 147-263 (480)
203 3frh_A 16S rRNA methylase; met 99.6 1.6E-14 5.4E-19 107.6 13.8 157 48-232 95-252 (253)
204 4hc4_A Protein arginine N-meth 99.6 4.3E-15 1.5E-19 119.2 11.4 102 61-167 83-187 (376)
205 2plw_A Ribosomal RNA methyltra 99.6 2.2E-14 7.5E-19 106.2 14.4 99 59-171 20-156 (201)
206 3ajd_A Putative methyltransfer 99.6 4E-15 1.4E-19 115.5 10.8 119 52-173 74-215 (274)
207 1wy7_A Hypothetical protein PH 99.6 1.2E-13 3.9E-18 102.8 18.2 141 43-219 28-173 (207)
208 2bm8_A Cephalosporin hydroxyla 99.6 1.2E-15 4E-20 115.9 7.4 109 51-170 71-188 (236)
209 1inl_A Spermidine synthase; be 99.6 2.9E-14 9.8E-19 111.7 15.4 109 61-170 90-206 (296)
210 2qm3_A Predicted methyltransfe 99.6 8.1E-14 2.8E-18 112.7 18.2 106 60-170 171-279 (373)
211 2hnk_A SAM-dependent O-methylt 99.6 1.8E-14 6.2E-19 109.6 13.3 121 46-171 45-183 (239)
212 1uir_A Polyamine aminopropyltr 99.6 2.4E-14 8.3E-19 113.0 14.5 111 61-171 77-197 (314)
213 3k6r_A Putative transferase PH 99.6 4.4E-14 1.5E-18 108.9 15.5 137 49-215 115-251 (278)
214 1r18_A Protein-L-isoaspartate( 99.6 1.1E-14 3.7E-19 110.0 11.9 118 47-171 68-196 (227)
215 3cbg_A O-methyltransferase; cy 99.6 5.7E-15 1.9E-19 111.9 9.6 108 60-172 71-185 (232)
216 2pt6_A Spermidine synthase; tr 99.6 5.2E-14 1.8E-18 111.4 15.3 110 61-171 116-232 (321)
217 2avd_A Catechol-O-methyltransf 99.6 7E-15 2.4E-19 111.1 9.6 119 48-171 56-181 (229)
218 3c3y_A Pfomt, O-methyltransfer 99.6 8.6E-15 2.9E-19 111.2 9.6 109 57-170 66-182 (237)
219 3sso_A Methyltransferase; macr 99.6 4.2E-15 1.4E-19 118.9 8.1 112 46-171 202-326 (419)
220 2b2c_A Spermidine synthase; be 99.6 2.5E-14 8.5E-19 112.7 12.4 108 61-169 108-222 (314)
221 1xj5_A Spermidine synthase 1; 99.6 2.2E-14 7.6E-19 113.9 11.2 109 60-169 119-235 (334)
222 1ne2_A Hypothetical protein TA 99.6 2.8E-13 9.6E-18 100.1 16.5 104 44-159 31-139 (200)
223 1mjf_A Spermidine synthase; sp 99.6 8.5E-14 2.9E-18 108.3 14.2 108 61-171 75-195 (281)
224 1zq9_A Probable dimethyladenos 99.6 1.9E-14 6.3E-19 112.2 10.3 115 46-166 13-144 (285)
225 2i7c_A Spermidine synthase; tr 99.6 1E-13 3.4E-18 108.0 14.3 111 60-170 77-193 (283)
226 2cmg_A Spermidine synthase; tr 99.5 1.6E-13 5.4E-18 105.5 14.7 99 61-170 72-172 (262)
227 2o07_A Spermidine synthase; st 99.5 2.7E-14 9.1E-19 112.2 10.4 111 60-171 94-211 (304)
228 2f8l_A Hypothetical protein LM 99.5 2.5E-13 8.5E-18 108.8 16.0 110 58-172 127-259 (344)
229 3dou_A Ribosomal RNA large sub 99.5 1.5E-13 5.3E-18 100.8 13.5 98 59-172 23-142 (191)
230 1sqg_A SUN protein, FMU protei 99.5 6.3E-14 2.2E-18 115.4 12.7 123 46-172 231-377 (429)
231 3m6w_A RRNA methylase; rRNA me 99.5 6.1E-14 2.1E-18 115.4 12.4 119 51-173 91-233 (464)
232 2frx_A Hypothetical protein YE 99.5 1.9E-13 6.3E-18 113.5 14.4 120 51-173 105-250 (479)
233 3m4x_A NOL1/NOP2/SUN family pr 99.5 4.5E-14 1.5E-18 116.1 9.3 120 51-173 95-238 (456)
234 4dmg_A Putative uncharacterize 99.5 3E-13 1E-17 109.6 13.4 106 61-172 214-329 (393)
235 2b78_A Hypothetical protein SM 99.5 1.7E-13 5.9E-18 111.1 11.9 110 60-172 211-334 (385)
236 2nyu_A Putative ribosomal RNA 99.5 3E-13 1E-17 99.5 11.2 100 59-172 20-148 (196)
237 2wa2_A Non-structural protein 99.5 3.1E-14 1.1E-18 110.1 5.9 113 51-171 72-195 (276)
238 3c0k_A UPF0064 protein YCCW; P 99.5 4.8E-13 1.6E-17 109.1 13.2 109 61-172 220-342 (396)
239 2as0_A Hypothetical protein PH 99.5 5.3E-13 1.8E-17 108.8 12.8 109 61-172 217-338 (396)
240 2oxt_A Nucleoside-2'-O-methylt 99.5 3.6E-14 1.2E-18 109.2 5.6 113 50-171 63-187 (265)
241 1wxx_A TT1595, hypothetical pr 99.5 2.4E-13 8.3E-18 110.3 10.6 107 61-172 209-328 (382)
242 1qam_A ERMC' methyltransferase 99.5 1.2E-13 4.3E-18 105.2 8.2 86 46-139 15-101 (244)
243 2yx1_A Hypothetical protein MJ 99.5 1.3E-12 4.5E-17 104.1 14.4 107 52-172 188-294 (336)
244 1uwv_A 23S rRNA (uracil-5-)-me 99.5 2.8E-12 9.5E-17 105.6 16.1 113 48-169 273-389 (433)
245 3v97_A Ribosomal RNA large sub 99.4 5.3E-13 1.8E-17 115.7 11.3 108 62-171 540-659 (703)
246 2okc_A Type I restriction enzy 99.4 8.3E-13 2.8E-17 109.2 11.6 129 41-171 151-309 (445)
247 2ih2_A Modification methylase 99.4 2.2E-12 7.5E-17 106.0 13.9 119 41-172 19-167 (421)
248 2h1r_A Dimethyladenosine trans 99.4 1.3E-12 4.5E-17 102.4 10.9 91 46-143 27-117 (299)
249 3gru_A Dimethyladenosine trans 99.4 2.2E-12 7.6E-17 100.4 11.6 91 46-143 35-125 (295)
250 2xyq_A Putative 2'-O-methyl tr 99.4 2.1E-12 7.3E-17 100.1 10.8 117 58-219 60-195 (290)
251 3k0b_A Predicted N6-adenine-sp 99.4 5.8E-12 2E-16 102.2 13.3 129 41-172 181-353 (393)
252 3ldu_A Putative methylase; str 99.4 5.6E-12 1.9E-16 102.1 12.9 128 41-171 175-346 (385)
253 1yub_A Ermam, rRNA methyltrans 99.4 5.5E-15 1.9E-19 112.9 -5.0 116 46-169 14-145 (245)
254 3ldg_A Putative uncharacterize 99.4 1.3E-11 4.4E-16 99.7 14.2 127 42-171 175-345 (384)
255 2p41_A Type II methyltransfera 99.4 3.6E-13 1.2E-17 105.7 4.4 104 59-172 80-194 (305)
256 2jjq_A Uncharacterized RNA met 99.3 2.3E-11 8E-16 99.6 14.3 99 60-169 289-387 (425)
257 3o4f_A Spermidine synthase; am 99.3 1.5E-10 5.1E-15 89.4 16.5 111 61-171 83-200 (294)
258 3tqs_A Ribosomal RNA small sub 99.3 2E-11 6.7E-16 93.3 10.4 87 46-140 14-104 (255)
259 2qfm_A Spermine synthase; sper 99.3 2.2E-11 7.5E-16 96.5 10.1 111 61-172 188-317 (364)
260 3bt7_A TRNA (uracil-5-)-methyl 99.3 2.9E-11 1E-15 97.6 11.1 114 47-172 200-329 (369)
261 2ar0_A M.ecoki, type I restric 99.3 2.6E-11 8.8E-16 102.3 11.0 132 41-172 149-315 (541)
262 3b5i_A S-adenosyl-L-methionine 99.3 3.8E-10 1.3E-14 90.4 17.1 159 62-220 53-297 (374)
263 2b9e_A NOL1/NOP2/SUN domain fa 99.3 1.4E-10 4.9E-15 91.0 14.4 118 52-173 93-238 (309)
264 3fut_A Dimethyladenosine trans 99.3 3.5E-11 1.2E-15 92.6 10.4 89 46-143 32-121 (271)
265 1m6y_A S-adenosyl-methyltransf 99.3 2.4E-11 8.1E-16 94.9 9.3 90 47-140 12-106 (301)
266 3axs_A Probable N(2),N(2)-dime 99.2 1E-10 3.4E-15 94.5 9.8 103 61-169 52-158 (392)
267 2efj_A 3,7-dimethylxanthine me 99.2 6.2E-10 2.1E-14 89.3 14.2 154 62-220 53-291 (384)
268 2dul_A N(2),N(2)-dimethylguano 99.2 1.2E-10 4E-15 94.0 9.2 102 61-169 47-164 (378)
269 3v97_A Ribosomal RNA large sub 99.1 5.3E-10 1.8E-14 97.1 13.5 130 41-172 170-350 (703)
270 3khk_A Type I restriction-modi 99.1 2.5E-10 8.5E-15 96.2 10.7 130 40-172 224-398 (544)
271 3lkd_A Type I restriction-modi 99.1 1.8E-09 6.3E-14 90.8 14.2 132 40-172 196-361 (542)
272 3uzu_A Ribosomal RNA small sub 99.1 4.1E-10 1.4E-14 87.1 9.4 77 46-129 27-105 (279)
273 2r6z_A UPF0341 protein in RSP 99.1 4E-11 1.4E-15 91.8 3.3 88 53-144 75-173 (258)
274 1m6e_X S-adenosyl-L-methionnin 99.1 1.6E-09 5.5E-14 86.2 11.8 156 62-219 52-278 (359)
275 3ftd_A Dimethyladenosine trans 99.1 1.7E-09 5.7E-14 82.4 11.3 77 46-130 16-92 (249)
276 2qy6_A UPF0209 protein YFCK; s 99.1 1.1E-09 3.9E-14 83.5 10.1 143 60-232 59-247 (257)
277 1qyr_A KSGA, high level kasuga 99.0 3.3E-10 1.1E-14 86.4 6.1 89 46-141 6-99 (252)
278 3cvo_A Methyltransferase-like 99.0 1.2E-08 4.1E-13 74.6 13.5 101 61-169 30-154 (202)
279 4gqb_A Protein arginine N-meth 98.9 3.2E-09 1.1E-13 90.2 9.5 100 62-166 358-464 (637)
280 3s1s_A Restriction endonucleas 98.9 2.5E-08 8.6E-13 86.2 14.9 134 39-172 293-468 (878)
281 3ll7_A Putative methyltransfer 98.9 2.4E-09 8.3E-14 86.6 8.3 73 62-139 94-170 (410)
282 2oyr_A UPF0341 protein YHIQ; a 98.9 1.5E-09 5E-14 82.8 5.9 109 52-163 77-194 (258)
283 3evf_A RNA-directed RNA polyme 98.9 4.5E-09 1.6E-13 79.6 7.9 115 51-171 64-186 (277)
284 3c6k_A Spermine synthase; sper 98.9 8.1E-08 2.8E-12 76.5 14.5 109 60-169 204-331 (381)
285 4fzv_A Putative methyltransfer 98.8 1.4E-07 4.8E-12 75.2 14.7 126 51-176 138-291 (359)
286 3ua3_A Protein arginine N-meth 98.8 1.3E-08 4.4E-13 86.6 8.4 102 62-166 410-531 (745)
287 1wg8_A Predicted S-adenosylmet 98.8 5.2E-08 1.8E-12 74.4 9.7 86 47-141 8-98 (285)
288 3gcz_A Polyprotein; flavivirus 98.7 8.1E-09 2.8E-13 78.4 5.0 114 52-171 81-203 (282)
289 3ufb_A Type I restriction-modi 98.7 2.9E-07 1E-11 77.4 14.0 130 40-172 196-365 (530)
290 2wk1_A NOVP; transferase, O-me 98.6 1.7E-07 5.9E-12 72.2 9.2 108 60-170 105-245 (282)
291 2k4m_A TR8_protein, UPF0146 pr 98.6 1.2E-07 4.2E-12 64.7 6.8 97 50-173 26-125 (153)
292 4auk_A Ribosomal RNA large sub 98.6 5E-06 1.7E-10 66.1 16.2 88 59-162 209-296 (375)
293 3eld_A Methyltransferase; flav 98.4 5.4E-07 1.9E-11 68.9 7.4 106 60-171 80-193 (300)
294 2zig_A TTHA0409, putative modi 98.4 1.9E-06 6.4E-11 67.4 9.6 62 44-108 219-280 (297)
295 2vz8_A Fatty acid synthase; tr 98.3 1.4E-07 4.7E-12 91.9 1.8 148 60-219 1239-1393(2512)
296 3lkz_A Non-structural protein 98.3 9.6E-06 3.3E-10 61.8 11.4 115 50-171 83-206 (321)
297 1rjd_A PPM1P, carboxy methyl t 98.3 7.4E-06 2.5E-10 64.8 11.1 152 60-214 96-281 (334)
298 2px2_A Genome polyprotein [con 98.3 2E-05 6.9E-10 59.0 12.6 110 51-171 63-185 (269)
299 3tka_A Ribosomal RNA small sub 98.3 1.7E-06 5.9E-11 67.6 6.6 89 47-142 43-138 (347)
300 3p8z_A Mtase, non-structural p 98.2 4.7E-05 1.6E-09 56.2 11.9 115 50-172 67-189 (267)
301 2uyo_A Hypothetical protein ML 98.2 5.1E-05 1.8E-09 59.4 13.0 151 62-216 103-274 (310)
302 3vyw_A MNMC2; tRNA wobble urid 98.1 0.00012 4.2E-09 56.7 13.2 141 61-232 96-260 (308)
303 1g60_A Adenine-specific methyl 98.0 3.2E-05 1.1E-09 59.1 8.7 62 44-108 196-257 (260)
304 1i4w_A Mitochondrial replicati 97.9 5.5E-05 1.9E-09 60.1 8.7 75 46-126 37-117 (353)
305 3r24_A NSP16, 2'-O-methyl tran 97.6 0.00068 2.3E-08 51.8 10.3 105 50-172 93-220 (344)
306 1g55_A DNA cytosine methyltran 97.5 0.0022 7.7E-08 50.9 12.4 76 62-145 2-81 (343)
307 3qv2_A 5-cytosine DNA methyltr 97.4 0.0057 2E-07 48.1 14.1 139 62-232 10-180 (327)
308 3g7u_A Cytosine-specific methy 97.4 0.0048 1.6E-07 49.6 13.8 74 63-145 3-84 (376)
309 2oo3_A Protein involved in cat 97.4 0.00013 4.4E-09 55.8 4.3 105 62-173 92-202 (283)
310 3iei_A Leucine carboxyl methyl 97.4 0.024 8.1E-07 44.7 16.9 153 61-219 90-279 (334)
311 4h0n_A DNMT2; SAH binding, tra 97.2 0.0074 2.5E-07 47.7 12.6 140 62-232 3-169 (333)
312 2c7p_A Modification methylase 97.0 0.05 1.7E-06 42.8 15.5 72 62-144 11-83 (327)
313 1boo_A Protein (N-4 cytosine-s 97.0 0.0024 8.2E-08 50.3 7.5 62 44-108 236-297 (323)
314 1eg2_A Modification methylase 96.9 0.0031 1.1E-07 49.5 7.9 61 44-107 226-289 (319)
315 2py6_A Methyltransferase FKBM; 96.8 0.0056 1.9E-07 49.8 8.5 63 59-123 224-291 (409)
316 1f8f_A Benzyl alcohol dehydrog 96.7 0.012 4E-07 47.2 9.7 101 55-170 184-290 (371)
317 3tos_A CALS11; methyltransfera 96.7 0.025 8.7E-07 42.7 10.9 107 62-171 70-219 (257)
318 3pvc_A TRNA 5-methylaminomethy 96.6 0.011 3.6E-07 51.6 9.7 129 61-220 58-232 (689)
319 3ps9_A TRNA 5-methylaminomethy 96.6 0.04 1.4E-06 47.8 13.2 128 62-220 67-240 (676)
320 4ej6_A Putative zinc-binding d 96.6 0.049 1.7E-06 43.6 12.8 105 55-171 176-286 (370)
321 1kol_A Formaldehyde dehydrogen 96.5 0.029 9.9E-07 45.4 11.0 103 57-169 181-300 (398)
322 1pqw_A Polyketide synthase; ro 96.4 0.026 8.7E-07 40.8 9.1 96 55-170 32-138 (198)
323 3two_A Mannitol dehydrogenase; 96.4 0.017 5.8E-07 45.8 8.8 94 57-170 172-266 (348)
324 2dph_A Formaldehyde dismutase; 96.4 0.051 1.7E-06 43.9 11.6 106 55-170 179-300 (398)
325 3fpc_A NADP-dependent alcohol 96.3 0.029 9.8E-07 44.6 9.7 100 55-170 160-267 (352)
326 3ubt_Y Modification methylase 96.3 0.14 4.8E-06 40.1 13.6 139 63-231 1-162 (331)
327 3me5_A Cytosine-specific methy 96.3 0.042 1.4E-06 45.5 10.6 76 62-143 88-180 (482)
328 3uog_A Alcohol dehydrogenase; 96.2 0.049 1.7E-06 43.4 10.7 100 55-171 183-289 (363)
329 1pl8_A Human sorbitol dehydrog 96.2 0.047 1.6E-06 43.4 10.6 99 56-170 166-274 (356)
330 3s2e_A Zinc-containing alcohol 96.2 0.031 1.1E-06 44.1 9.2 100 55-170 160-264 (340)
331 3ip1_A Alcohol dehydrogenase, 96.2 0.055 1.9E-06 43.9 10.8 99 58-170 210-319 (404)
332 3qwb_A Probable quinone oxidor 96.0 0.085 2.9E-06 41.5 11.0 97 57-170 144-248 (334)
333 1uuf_A YAHK, zinc-type alcohol 96.0 0.026 8.9E-07 45.2 8.1 97 57-170 190-289 (369)
334 3m6i_A L-arabinitol 4-dehydrog 96.0 0.094 3.2E-06 41.7 11.4 103 55-171 173-285 (363)
335 4a2c_A Galactitol-1-phosphate 96.0 0.13 4.4E-06 40.6 12.1 103 54-171 153-262 (346)
336 2zwa_A Leucine carboxyl methyl 96.0 0.37 1.3E-05 42.0 15.7 156 61-219 107-307 (695)
337 3uko_A Alcohol dehydrogenase c 96.0 0.058 2E-06 43.3 9.9 102 54-170 186-296 (378)
338 2qrv_A DNA (cytosine-5)-methyl 95.9 0.055 1.9E-06 41.9 9.2 72 61-140 15-91 (295)
339 4dvj_A Putative zinc-dependent 95.9 0.075 2.6E-06 42.4 10.3 93 61-168 171-269 (363)
340 1e3j_A NADP(H)-dependent ketos 95.9 0.12 4.1E-06 40.9 11.4 99 56-170 163-272 (352)
341 1v3u_A Leukotriene B4 12- hydr 95.9 0.062 2.1E-06 42.2 9.7 97 55-170 139-245 (333)
342 3jyn_A Quinone oxidoreductase; 95.8 0.074 2.5E-06 41.6 9.8 99 56-171 135-241 (325)
343 3goh_A Alcohol dehydrogenase, 95.8 0.03 1E-06 43.7 7.3 93 55-169 136-229 (315)
344 1p0f_A NADP-dependent alcohol 95.8 0.1 3.5E-06 41.7 10.5 101 55-170 185-294 (373)
345 4eez_A Alcohol dehydrogenase 1 95.8 0.12 4.2E-06 40.7 10.9 103 56-170 158-264 (348)
346 1cdo_A Alcohol dehydrogenase; 95.7 0.14 4.6E-06 41.0 11.1 100 55-170 186-295 (374)
347 1vj0_A Alcohol dehydrogenase, 95.7 0.092 3.2E-06 42.1 9.9 100 56-170 189-299 (380)
348 1e3i_A Alcohol dehydrogenase, 95.7 0.14 4.9E-06 40.9 11.0 100 55-170 189-298 (376)
349 2jhf_A Alcohol dehydrogenase E 95.7 0.15 5.2E-06 40.7 11.2 100 55-170 185-294 (374)
350 4b7c_A Probable oxidoreductase 95.6 0.075 2.6E-06 41.8 9.1 100 55-170 143-249 (336)
351 3gms_A Putative NADPH:quinone 95.6 0.046 1.6E-06 43.1 7.8 100 54-170 137-244 (340)
352 3jv7_A ADH-A; dehydrogenase, n 95.5 0.091 3.1E-06 41.5 9.4 99 58-171 168-272 (345)
353 1zkd_A DUF185; NESG, RPR58, st 95.5 0.14 4.9E-06 41.1 10.4 77 61-146 80-163 (387)
354 2zig_A TTHA0409, putative modi 95.5 0.026 8.8E-07 43.8 6.0 57 114-170 20-98 (297)
355 2j3h_A NADP-dependent oxidored 95.5 0.12 4E-06 40.8 9.7 98 55-170 149-256 (345)
356 2c0c_A Zinc binding alcohol de 95.4 0.2 6.8E-06 39.9 11.0 99 55-170 157-262 (362)
357 2fzw_A Alcohol dehydrogenase c 95.4 0.13 4.3E-06 41.2 9.9 100 55-170 184-293 (373)
358 4eye_A Probable oxidoreductase 95.4 0.096 3.3E-06 41.4 8.9 98 55-169 153-257 (342)
359 3swr_A DNA (cytosine-5)-methyl 95.3 0.62 2.1E-05 42.2 14.6 77 61-145 539-631 (1002)
360 1yb5_A Quinone oxidoreductase; 95.2 0.21 7.2E-06 39.6 10.4 95 56-169 165-269 (351)
361 2d8a_A PH0655, probable L-thre 95.0 0.17 5.8E-06 40.0 9.4 98 56-170 163-268 (348)
362 1rjw_A ADH-HT, alcohol dehydro 95.0 0.14 4.7E-06 40.3 8.9 95 58-170 161-262 (339)
363 1jvb_A NAD(H)-dependent alcoho 95.0 0.095 3.2E-06 41.4 7.9 100 57-170 166-272 (347)
364 1qor_A Quinone oxidoreductase; 95.0 0.14 4.9E-06 40.0 8.9 96 56-170 135-240 (327)
365 2eih_A Alcohol dehydrogenase; 95.0 0.19 6.6E-06 39.6 9.7 94 58-170 163-266 (343)
366 2vhw_A Alanine dehydrogenase; 95.0 0.037 1.3E-06 44.5 5.5 101 61-169 167-268 (377)
367 3ggo_A Prephenate dehydrogenas 94.7 0.43 1.5E-05 37.2 10.9 91 62-166 33-125 (314)
368 4dup_A Quinone oxidoreductase; 94.7 0.2 7E-06 39.6 9.2 99 55-170 161-266 (353)
369 1piw_A Hypothetical zinc-type 94.7 0.058 2E-06 42.9 6.0 98 57-169 175-276 (360)
370 3fbg_A Putative arginate lyase 94.7 0.39 1.3E-05 37.9 10.8 92 61-168 150-247 (346)
371 3nx4_A Putative oxidoreductase 94.7 0.19 6.5E-06 39.2 8.9 91 64-170 149-242 (324)
372 2hcy_A Alcohol dehydrogenase 1 94.7 0.14 4.7E-06 40.5 8.1 96 57-170 165-270 (347)
373 1wly_A CAAR, 2-haloacrylate re 94.6 0.29 1E-05 38.3 9.9 96 56-170 140-245 (333)
374 2j8z_A Quinone oxidoreductase; 94.6 0.28 9.5E-06 38.9 9.8 96 56-170 157-262 (354)
375 2cf5_A Atccad5, CAD, cinnamyl 94.5 0.045 1.5E-06 43.6 5.0 100 57-170 175-276 (357)
376 1yqd_A Sinapyl alcohol dehydro 94.5 0.081 2.8E-06 42.2 6.5 99 57-170 182-283 (366)
377 2b5w_A Glucose dehydrogenase; 94.5 0.18 6.2E-06 40.0 8.5 89 63-170 174-274 (357)
378 3krt_A Crotonyl COA reductase; 94.5 0.27 9.4E-06 40.4 9.7 96 57-169 224-344 (456)
379 1iz0_A Quinone oxidoreductase; 94.5 0.093 3.2E-06 40.6 6.5 94 59-170 123-219 (302)
380 2h6e_A ADH-4, D-arabinose 1-de 94.4 0.084 2.9E-06 41.7 6.3 96 58-170 168-270 (344)
381 2eez_A Alanine dehydrogenase; 94.3 0.062 2.1E-06 43.0 5.3 101 61-169 165-266 (369)
382 4f3n_A Uncharacterized ACR, CO 94.2 0.087 3E-06 42.9 5.8 46 62-107 138-188 (432)
383 3tqh_A Quinone oxidoreductase; 94.1 0.29 1E-05 38.1 8.8 96 55-168 146-244 (321)
384 1pjc_A Protein (L-alanine dehy 94.1 0.074 2.5E-06 42.4 5.4 101 62-170 167-268 (361)
385 3gaz_A Alcohol dehydrogenase s 94.0 0.5 1.7E-05 37.2 10.0 95 55-169 144-246 (343)
386 2vn8_A Reticulon-4-interacting 94.0 0.41 1.4E-05 38.2 9.6 95 59-169 181-280 (375)
387 3o26_A Salutaridine reductase; 93.9 0.59 2E-05 35.8 10.2 77 62-143 12-102 (311)
388 4eso_A Putative oxidoreductase 93.8 0.67 2.3E-05 34.7 9.9 100 62-170 8-139 (255)
389 3oig_A Enoyl-[acyl-carrier-pro 93.8 0.83 2.8E-05 34.3 10.5 105 62-171 7-149 (266)
390 2zb4_A Prostaglandin reductase 93.8 0.59 2E-05 37.0 10.0 98 55-170 152-261 (357)
391 3ioy_A Short-chain dehydrogena 93.7 0.99 3.4E-05 35.1 11.1 78 62-143 8-98 (319)
392 2cdc_A Glucose dehydrogenase g 93.6 0.33 1.1E-05 38.6 8.3 88 62-170 181-279 (366)
393 2dq4_A L-threonine 3-dehydroge 93.3 0.28 9.5E-06 38.6 7.4 95 56-170 160-263 (343)
394 4dcm_A Ribosomal RNA large sub 93.2 1 3.5E-05 36.0 10.6 113 51-173 27-140 (375)
395 4ft4_B DNA (cytosine-5)-methyl 93.1 3.5 0.00012 36.4 14.7 44 62-105 212-260 (784)
396 4a0s_A Octenoyl-COA reductase/ 93.1 1.2 4.1E-05 36.4 11.1 98 57-169 216-336 (447)
397 3fwz_A Inner membrane protein 93.1 1.3 4.5E-05 29.7 13.0 91 62-169 7-105 (140)
398 4dkj_A Cytosine-specific methy 93.0 1.7 5.7E-05 35.2 11.5 45 62-106 10-59 (403)
399 3grk_A Enoyl-(acyl-carrier-pro 92.9 1.3 4.4E-05 33.9 10.5 104 61-171 30-171 (293)
400 4fgs_A Probable dehydrogenase 92.9 1.1 3.7E-05 34.2 9.9 100 62-170 29-160 (273)
401 3pxx_A Carveol dehydrogenase; 92.8 2.4 8.2E-05 32.1 12.2 103 62-170 10-154 (287)
402 3p2y_A Alanine dehydrogenase/p 92.8 0.082 2.8E-06 42.4 3.6 97 61-168 183-301 (381)
403 1tt7_A YHFP; alcohol dehydroge 92.7 0.34 1.2E-05 37.8 7.1 97 58-170 146-248 (330)
404 3is3_A 17BETA-hydroxysteroid d 92.4 2.4 8E-05 31.9 11.3 105 62-172 18-155 (270)
405 3av4_A DNA (cytosine-5)-methyl 92.4 4.8 0.00016 37.8 14.7 44 62-105 851-894 (1330)
406 4fs3_A Enoyl-[acyl-carrier-pro 92.3 2.3 7.8E-05 31.8 11.0 105 62-171 6-148 (256)
407 4dio_A NAD(P) transhydrogenase 92.3 0.13 4.4E-06 41.6 4.1 42 61-103 189-231 (405)
408 3c85_A Putative glutathione-re 92.1 2.2 7.4E-05 29.9 10.3 91 62-169 39-139 (183)
409 1xa0_A Putative NADPH dependen 92.1 0.49 1.7E-05 36.9 7.2 97 58-170 145-247 (328)
410 3ek2_A Enoyl-(acyl-carrier-pro 92.0 1.7 5.7E-05 32.6 10.0 104 60-170 12-154 (271)
411 3ijr_A Oxidoreductase, short c 92.0 2.7 9.2E-05 32.1 11.3 103 62-170 47-183 (291)
412 4imr_A 3-oxoacyl-(acyl-carrier 92.0 1.5 5.1E-05 33.2 9.7 75 62-142 33-119 (275)
413 3llv_A Exopolyphosphatase-rela 91.9 0.84 2.9E-05 30.6 7.4 67 62-140 6-78 (141)
414 3f9i_A 3-oxoacyl-[acyl-carrier 91.6 3.1 0.00011 30.7 11.6 73 61-142 13-94 (249)
415 2gdz_A NAD+-dependent 15-hydro 91.5 2.6 8.8E-05 31.6 10.6 81 62-146 7-100 (267)
416 3ius_A Uncharacterized conserv 91.5 3.5 0.00012 31.0 11.8 71 62-148 5-79 (286)
417 1wma_A Carbonyl reductase [NAD 91.5 0.84 2.9E-05 34.2 7.8 102 62-170 4-139 (276)
418 3ce6_A Adenosylhomocysteinase; 91.4 0.93 3.2E-05 37.7 8.4 91 59-170 271-362 (494)
419 3gvc_A Oxidoreductase, probabl 91.4 3 0.0001 31.6 10.9 73 62-143 29-114 (277)
420 1boo_A Protein (N-4 cytosine-s 91.4 0.28 9.4E-06 38.5 5.0 58 114-171 13-86 (323)
421 1xg5_A ARPG836; short chain de 91.2 3.4 0.00012 31.1 11.0 77 62-142 32-121 (279)
422 3b1f_A Putative prephenate deh 91.2 1.9 6.6E-05 32.8 9.6 89 63-166 7-98 (290)
423 3v2g_A 3-oxoacyl-[acyl-carrier 91.1 3.9 0.00013 30.8 11.5 103 62-170 31-166 (271)
424 3r3s_A Oxidoreductase; structu 91.1 2.6 8.8E-05 32.2 10.3 104 62-171 49-187 (294)
425 3edm_A Short chain dehydrogena 91.0 1.2 4.2E-05 33.3 8.2 103 62-170 8-144 (259)
426 4e21_A 6-phosphogluconate dehy 91.0 2.4 8.3E-05 33.6 10.2 89 62-166 22-112 (358)
427 3t4x_A Oxidoreductase, short c 90.9 3.4 0.00011 31.0 10.7 78 62-143 10-96 (267)
428 1l7d_A Nicotinamide nucleotide 90.9 0.23 7.9E-06 39.9 4.3 42 61-103 171-213 (384)
429 4g81_D Putative hexonate dehyd 90.9 2.1 7.2E-05 32.2 9.4 77 62-144 9-98 (255)
430 1x13_A NAD(P) transhydrogenase 90.8 0.22 7.7E-06 40.3 4.1 42 61-103 171-213 (401)
431 2g5c_A Prephenate dehydrogenas 90.7 2.2 7.4E-05 32.3 9.5 90 63-167 2-94 (281)
432 1g60_A Adenine-specific methyl 90.7 0.36 1.2E-05 36.5 5.0 54 116-169 5-74 (260)
433 3l9w_A Glutathione-regulated p 90.7 1.8 6E-05 35.2 9.3 93 62-171 4-104 (413)
434 2f1k_A Prephenate dehydrogenas 90.6 2.5 8.6E-05 31.9 9.8 85 64-166 2-88 (279)
435 3sx2_A Putative 3-ketoacyl-(ac 90.6 2.6 9E-05 31.7 9.9 77 62-144 13-114 (278)
436 3k31_A Enoyl-(acyl-carrier-pro 90.4 1.9 6.4E-05 33.1 8.9 103 62-171 30-170 (296)
437 1geg_A Acetoin reductase; SDR 90.1 4.5 0.00015 30.0 10.7 75 62-142 2-89 (256)
438 3u5t_A 3-oxoacyl-[acyl-carrier 90.0 3.1 0.00011 31.3 9.7 103 62-170 27-162 (267)
439 1ja9_A 4HNR, 1,3,6,8-tetrahydr 90.0 2.5 8.4E-05 31.7 9.2 75 62-142 21-109 (274)
440 3gqv_A Enoyl reductase; medium 90.0 2.3 7.7E-05 33.8 9.3 93 60-169 163-263 (371)
441 1xhl_A Short-chain dehydrogena 89.9 4.2 0.00014 31.1 10.6 78 62-142 26-116 (297)
442 1g0o_A Trihydroxynaphthalene r 89.9 4.8 0.00016 30.4 10.8 103 62-170 29-164 (283)
443 3l77_A Short-chain alcohol deh 89.8 4.2 0.00014 29.7 10.2 78 62-144 2-92 (235)
444 3iht_A S-adenosyl-L-methionine 89.8 1.3 4.3E-05 30.6 6.4 111 50-171 30-149 (174)
445 1zcj_A Peroxisomal bifunctiona 89.8 7.4 0.00025 32.0 12.4 95 62-167 37-148 (463)
446 2ew2_A 2-dehydropantoate 2-red 89.7 4.2 0.00014 31.1 10.5 99 63-168 4-107 (316)
447 3o38_A Short chain dehydrogena 89.5 2.4 8.2E-05 31.7 8.8 77 62-143 22-112 (266)
448 4fn4_A Short chain dehydrogena 89.5 2.5 8.4E-05 31.8 8.6 75 62-142 7-94 (254)
449 4e12_A Diketoreductase; oxidor 89.4 1.5 5.2E-05 33.4 7.6 97 63-166 5-118 (283)
450 4a27_A Synaptic vesicle membra 89.1 0.44 1.5E-05 37.6 4.5 98 55-170 136-239 (349)
451 3nyw_A Putative oxidoreductase 89.1 2.8 9.7E-05 31.1 8.8 78 62-142 7-97 (250)
452 3hwr_A 2-dehydropantoate 2-red 89.0 4.2 0.00014 31.5 10.0 95 62-169 19-120 (318)
453 2dpo_A L-gulonate 3-dehydrogen 88.8 2.4 8.3E-05 33.0 8.4 94 62-166 6-120 (319)
454 3c24_A Putative oxidoreductase 88.6 3.7 0.00012 31.2 9.3 84 63-166 12-98 (286)
455 1zsy_A Mitochondrial 2-enoyl t 88.4 5.1 0.00017 31.5 10.3 96 57-169 163-270 (357)
456 2x9g_A PTR1, pteridine reducta 88.2 5.5 0.00019 30.2 10.1 76 62-142 23-116 (288)
457 3ksu_A 3-oxoacyl-acyl carrier 87.9 3.4 0.00011 31.0 8.6 103 62-170 11-148 (262)
458 3g0o_A 3-hydroxyisobutyrate de 87.8 2.7 9.2E-05 32.3 8.2 85 62-166 7-99 (303)
459 3uve_A Carveol dehydrogenase ( 87.8 5.6 0.00019 30.1 9.9 75 62-142 11-114 (286)
460 3d1l_A Putative NADP oxidoredu 87.7 4.2 0.00014 30.4 9.1 88 62-167 10-100 (266)
461 3t7c_A Carveol dehydrogenase; 87.7 5.7 0.0002 30.3 9.9 75 62-142 28-127 (299)
462 3qiv_A Short-chain dehydrogena 87.6 3.1 0.00011 30.7 8.3 75 62-142 9-96 (253)
463 3cea_A MYO-inositol 2-dehydrog 87.6 7.4 0.00025 30.3 10.7 90 62-167 8-100 (346)
464 3d4o_A Dipicolinate synthase s 87.4 4.2 0.00014 31.1 9.0 89 60-168 153-243 (293)
465 1id1_A Putative potassium chan 87.4 5.1 0.00017 27.1 9.5 97 62-170 3-106 (153)
466 2rir_A Dipicolinate synthase, 87.3 5.2 0.00018 30.7 9.5 90 60-169 155-246 (300)
467 3pi7_A NADH oxidoreductase; gr 87.3 1.1 3.7E-05 35.3 5.7 90 63-169 166-263 (349)
468 2a4k_A 3-oxoacyl-[acyl carrier 87.2 7.6 0.00026 29.0 10.9 73 62-143 6-91 (263)
469 3rc1_A Sugar 3-ketoreductase; 87.2 6.9 0.00024 30.7 10.4 92 62-171 27-122 (350)
470 3ucx_A Short chain dehydrogena 87.2 4.4 0.00015 30.3 8.9 75 62-142 11-98 (264)
471 3guy_A Short-chain dehydrogena 87.1 7 0.00024 28.4 11.1 72 63-143 2-83 (230)
472 3tjr_A Short chain dehydrogena 87.0 3.9 0.00013 31.3 8.6 77 61-143 30-119 (301)
473 3h7a_A Short chain dehydrogena 86.9 2.4 8E-05 31.6 7.2 76 62-143 7-94 (252)
474 1gu7_A Enoyl-[acyl-carrier-pro 86.8 1.1 3.7E-05 35.5 5.5 97 57-170 162-276 (364)
475 3v2h_A D-beta-hydroxybutyrate 86.8 7.6 0.00026 29.4 10.1 77 62-143 25-115 (281)
476 2g1u_A Hypothetical protein TM 86.8 3.6 0.00012 28.0 7.5 96 61-170 18-119 (155)
477 2i6t_A Ubiquitin-conjugating e 86.7 3.9 0.00013 31.6 8.4 98 62-169 14-125 (303)
478 3pk0_A Short-chain dehydrogena 86.5 4.1 0.00014 30.4 8.4 76 62-142 10-98 (262)
479 3l4b_C TRKA K+ channel protien 86.4 4.9 0.00017 29.0 8.6 90 64-169 2-99 (218)
480 1lss_A TRK system potassium up 86.4 5.1 0.00018 26.2 10.0 91 62-167 4-100 (140)
481 3rkr_A Short chain oxidoreduct 86.3 4.2 0.00014 30.3 8.4 76 61-142 28-116 (262)
482 3gaf_A 7-alpha-hydroxysteroid 86.0 4.4 0.00015 30.2 8.3 76 62-143 12-100 (256)
483 3imf_A Short chain dehydrogena 86.0 3.6 0.00012 30.6 7.8 75 62-142 6-93 (257)
484 3e8x_A Putative NAD-dependent 85.9 6.6 0.00022 28.6 9.1 71 62-144 21-96 (236)
485 3lyl_A 3-oxoacyl-(acyl-carrier 85.9 4.6 0.00016 29.7 8.3 76 62-143 5-93 (247)
486 3i83_A 2-dehydropantoate 2-red 85.6 5.5 0.00019 30.8 8.9 98 63-171 3-107 (320)
487 3tfo_A Putative 3-oxoacyl-(acy 85.6 4.1 0.00014 30.6 7.9 76 62-143 4-92 (264)
488 1bg6_A N-(1-D-carboxylethyl)-L 85.6 3.7 0.00013 32.2 8.0 98 63-168 5-108 (359)
489 3sju_A Keto reductase; short-c 85.5 4.9 0.00017 30.4 8.4 76 62-143 24-112 (279)
490 3gvp_A Adenosylhomocysteinase 85.2 4.2 0.00014 33.1 8.1 87 60-167 218-305 (435)
491 3lvj_C Sulfurtransferase TUSA; 85.2 4.5 0.00015 24.4 8.6 71 134-231 10-80 (82)
492 3mog_A Probable 3-hydroxybutyr 85.1 6.4 0.00022 32.6 9.4 96 63-169 6-120 (483)
493 2km1_A Protein DRE2; yeast, an 84.9 0.79 2.7E-05 30.8 3.2 71 94-167 21-96 (136)
494 3v8b_A Putative dehydrogenase, 84.9 5.7 0.0002 30.1 8.5 75 62-142 28-115 (283)
495 1zh8_A Oxidoreductase; TM0312, 84.8 9 0.00031 29.9 9.9 98 58-171 14-115 (340)
496 3ezy_A Dehydrogenase; structur 84.8 9 0.00031 29.9 9.9 93 63-171 3-97 (344)
497 3lf2_A Short chain oxidoreduct 84.5 6.8 0.00023 29.2 8.8 78 62-143 8-98 (265)
498 3dmg_A Probable ribosomal RNA 84.0 4.6 0.00016 32.3 7.9 110 48-173 33-143 (381)
499 1yb1_A 17-beta-hydroxysteroid 83.9 7 0.00024 29.3 8.6 76 62-143 31-119 (272)
500 3zwc_A Peroxisomal bifunctiona 83.9 19 0.00065 31.6 12.1 102 62-171 316-431 (742)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.95 E-value=2.6e-26 Score=177.01 Aligned_cols=188 Identities=13% Similarity=0.146 Sum_probs=139.5
Q ss_pred CCCCHHHHHHHHhhcC--CCCCCeEEEecCCCchHHHHHHHcC--CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeE
Q 026688 43 FPGPEKEFELMKGYLK--PVLGGNIIDASCGSGLFSRIFAKSG--LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLL 118 (235)
Q Consensus 43 ~~~~~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~ 118 (235)
.|...+..+.+..++. ..++.+|||+|||+|..+..++++. ++++|+|+|+|+.|++.|++++...+. ..++++
T Consensus 50 vP~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~--~~~v~~ 127 (261)
T 4gek_A 50 VPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA--PTPVDV 127 (261)
T ss_dssp STTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc--CceEEE
Confidence 4555555554443332 3458899999999999999999874 456999999999999999999887654 458999
Q ss_pred EecccccCCCCCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhh---c-
Q 026688 119 VRADISRLPFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ---I- 192 (235)
Q Consensus 119 ~~~d~~~~~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~---~- 192 (235)
.++|+.++++ +.||+|++..+++|++++ ..++++++++|+|||.+++.+...............++..+.. .
T Consensus 128 ~~~D~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s 205 (261)
T 4gek_A 128 IEGDIRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYS 205 (261)
T ss_dssp EESCTTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGG
T ss_pred eecccccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 9999998875 569999999999999765 4789999999999999999987664322111111111111110 0
Q ss_pred -----------CCceeecCHHHHHHHHHHcCCceeEEE-eeCcEEEEEEecCCC
Q 026688 193 -----------SGSYTFLSEREIEDLCRACGLVDFKCT-RNRGFVMFTATKPSQ 234 (235)
Q Consensus 193 -----------~~~~~~~~~~~~~~~l~~~Gf~~~~~~-~~~~~~~~~~~k~~~ 234 (235)
......++.+++.++|+++||+.+++. ..-.+..++|.|+..
T Consensus 206 ~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~~~ 259 (261)
T 4gek_A 206 ELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQCFNFGSLVALKAED 259 (261)
T ss_dssp GSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEETTEEEEEEECCTT
T ss_pred HHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEeccEEEEEEEEcCC
Confidence 111345788999999999999988875 455678899999864
No 2
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.94 E-value=1.8e-25 Score=168.18 Aligned_cols=179 Identities=17% Similarity=0.229 Sum_probs=140.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
....+.+.+.+...++ +|||+|||+|.++..+++. +..+++++|+++.+++.+++++...+. ..++++.+.|+.++
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANL--NDRIQIVQGDVHNI 105 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECBTTBC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccc--cCceEEEEcCHHHC
Confidence 4556777777776555 9999999999999999998 567999999999999999999887654 45799999999998
Q ss_pred CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHh--------hcCCceee
Q 026688 127 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM--------QISGSYTF 198 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 198 (235)
+++.++||+|++..+++|++++..+++++.++|+|||.+++.+..... .....+...+. ....+...
T Consensus 106 ~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (219)
T 3dlc_A 106 PIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK-----ELRDSISAEMIRKNPDWKEFNRKNISQ 180 (219)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH-----HHHHHHHHHHHHHCTTHHHHHHHHSSH
T ss_pred CCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH-----HHHHHHHHHHHHhHHHHHhhhhhcccc
Confidence 888889999999999999999999999999999999999998755421 11111111110 01123445
Q ss_pred cCHHHHHHHHHHcCCceeEEEeeCcEEEEEEecCCC
Q 026688 199 LSEREIEDLCRACGLVDFKCTRNRGFVMFTATKPSQ 234 (235)
Q Consensus 199 ~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~k~~~ 234 (235)
++.+++.++|+++||+++++.......+++.+|+.+
T Consensus 181 ~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~k~~~ 216 (219)
T 3dlc_A 181 ENVERFQNVLDEIGISSYEIILGDEGFWIIISKTDQ 216 (219)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEETTEEEEEEBCCSC
T ss_pred CCHHHHHHHHHHcCCCeEEEEecCCceEEEEecccc
Confidence 688999999999999999988776666666666543
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.94 E-value=6.6e-25 Score=165.32 Aligned_cols=166 Identities=17% Similarity=0.177 Sum_probs=138.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
+.+++.+...++.+|||+|||+|.++..+++.+ +..+++++|+++.+++.+++++...+ ..++.+...|+.+.+++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG---LKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECBTTBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEecccccCCCC
Confidence 455666666678899999999999999999985 66799999999999999999987765 34799999999988887
Q ss_pred CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHH
Q 026688 130 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 209 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (235)
.++||+|++..+++|++++..+++++.++|+|||.+++.++....... .......++.+++.++++
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~ 169 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK--------------GPPPEEVYSEWEVGLILE 169 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS--------------SCCGGGSCCHHHHHHHHH
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc--------------CCchhcccCHHHHHHHHH
Confidence 889999999999999999999999999999999999999887643211 112344679999999999
Q ss_pred HcCCceeEEEeeC-cEEEEEEecCC
Q 026688 210 ACGLVDFKCTRNR-GFVMFTATKPS 233 (235)
Q Consensus 210 ~~Gf~~~~~~~~~-~~~~~~~~k~~ 233 (235)
++||+++.....+ ....++++|+.
T Consensus 170 ~~Gf~~~~~~~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 170 DAGIRVGRVVEVGKYCFGVYAMIVK 194 (219)
T ss_dssp HTTCEEEEEEEETTTEEEEEEECC-
T ss_pred HCCCEEEEEEeeCCceEEEEEEecc
Confidence 9999998886544 66777888764
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.93 E-value=1.2e-24 Score=165.59 Aligned_cols=183 Identities=15% Similarity=0.216 Sum_probs=139.8
Q ss_pred CHHHHHHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 46 PEKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 46 ~~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
.....+.+...+. ..++.+|||+|||+|.++..+++..+..+++++|+|+.+++.+++++... .++.+.++|+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~ 102 (234)
T 3dtn_A 28 FDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-----LKVKYIEADYS 102 (234)
T ss_dssp HHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-----TTEEEEESCTT
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-----CCEEEEeCchh
Confidence 3445566666665 45678999999999999999999987789999999999999999987653 37999999999
Q ss_pred cCCCCCCceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhH-------------
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM------------- 189 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~------------- 189 (235)
+.+++ ++||+|++..+++|++++. .+++++.++|+|||.+++.++...............+...
T Consensus 103 ~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (234)
T 3dtn_A 103 KYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAA 181 (234)
T ss_dssp TCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHT
T ss_pred ccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHH
Confidence 98866 8999999999999998775 5999999999999999999987653221111111111111
Q ss_pred -hhcCCceeecCHHHHHHHHHHcCCceeEEE-eeCcEEEEEEecCCC
Q 026688 190 -MQISGSYTFLSEREIEDLCRACGLVDFKCT-RNRGFVMFTATKPSQ 234 (235)
Q Consensus 190 -~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~-~~~~~~~~~~~k~~~ 234 (235)
.....+...++.+++.++|+++||+++++. ....+.++.+.|+.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~~~ 228 (234)
T 3dtn_A 182 GYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRKTEG 228 (234)
T ss_dssp TC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECC--
T ss_pred HHHhcccccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEeccc
Confidence 011134566789999999999999998886 445778888887753
No 5
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.93 E-value=2.2e-24 Score=167.75 Aligned_cols=169 Identities=22% Similarity=0.252 Sum_probs=135.2
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
...+.+.+.+...++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++...+. ..++.+..+|+.+++
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDLP 124 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccCC
Confidence 445667777777778999999999999999998865 46999999999999999999877654 347999999999988
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHH
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 207 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (235)
++.++||+|++..+++|++++..+++++.++|+|||.+++.++...... ..........+.....+...++.+++.++
T Consensus 125 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (273)
T 3bus_A 125 FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPV--EGAKKEAVDAFRAGGGVLSLGGIDEYESD 202 (273)
T ss_dssp SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCC--CHHHHHHHHHHHHHHTCCCCCCHHHHHHH
T ss_pred CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCC--ChhHHHHHHHHHhhcCccCCCCHHHHHHH
Confidence 8788999999999999999999999999999999999999988754321 11111111111112234567899999999
Q ss_pred HHHcCCceeEEEee
Q 026688 208 CRACGLVDFKCTRN 221 (235)
Q Consensus 208 l~~~Gf~~~~~~~~ 221 (235)
++++||+++.....
T Consensus 203 l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 203 VRQAELVVTSTVDI 216 (273)
T ss_dssp HHHTTCEEEEEEEC
T ss_pred HHHcCCeEEEEEEC
Confidence 99999998877643
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.93 E-value=6.3e-25 Score=169.70 Aligned_cols=166 Identities=17% Similarity=0.223 Sum_probs=133.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
...++.+.+.+...++.+|||+|||+|.++..+++.++ +|+++|+|+.+++.+++++...+ ..++.+.++|+.++
T Consensus 23 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~l 97 (260)
T 1vl5_A 23 GSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNG---HQQVEYVQGDAEQM 97 (260)
T ss_dssp CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCC-CC
T ss_pred HHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEecHHhC
Confidence 34456777777777789999999999999999999876 99999999999999999887654 34799999999998
Q ss_pred CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHh--hcCCceeecCHHHH
Q 026688 127 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM--QISGSYTFLSEREI 204 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 204 (235)
++++++||+|++..+++|++++..+++++.++|+|||.+++.++..... +....+..... ....+...++.+++
T Consensus 98 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (260)
T 1vl5_A 98 PFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN----DAFDVFYNYVEKERDYSHHRAWKKSDW 173 (260)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS----HHHHHHHHHHHHHHCTTCCCCCBHHHH
T ss_pred CCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC----HHHHHHHHHHHHhcCccccCCCCHHHH
Confidence 8888899999999999999999999999999999999999987765322 22222222111 12334567899999
Q ss_pred HHHHHHcCCceeEEEee
Q 026688 205 EDLCRACGLVDFKCTRN 221 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~~~~ 221 (235)
.++|+++||+++.....
T Consensus 174 ~~~l~~aGf~~~~~~~~ 190 (260)
T 1vl5_A 174 LKMLEEAGFELEELHCF 190 (260)
T ss_dssp HHHHHHHTCEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEEe
Confidence 99999999998776644
No 7
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.93 E-value=4.1e-25 Score=166.56 Aligned_cols=173 Identities=17% Similarity=0.146 Sum_probs=133.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
+.+++.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++++. .++++.++|+.+.+++
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~- 104 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP- 104 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-
Confidence 3444444444678999999999999999999854 99999999999999998753 3688999999998876
Q ss_pred CceeEEEecccccccCChHH--HHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhH----hhcCCceeecCHHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPST--GVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM----MQISGSYTFLSEREI 204 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~--~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 204 (235)
++||+|++..+++|++++.. +++++.++|+|||.+++.++..............+.... ........+++.+++
T Consensus 105 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (220)
T 3hnr_A 105 TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVM 184 (220)
T ss_dssp SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHH
T ss_pred CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHH
Confidence 89999999999999998876 999999999999999999876543211111111110000 001112345689999
Q ss_pred HHHHHHcCCceeEEEeeCcEEEEEEecCC
Q 026688 205 EDLCRACGLVDFKCTRNRGFVMFTATKPS 233 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~~~~~~~~~~~~~k~~ 233 (235)
.++++++||+++.....+..+++.++|+.
T Consensus 185 ~~~l~~aGf~v~~~~~~~~~w~~~~~~~~ 213 (220)
T 3hnr_A 185 QTIFENNGFHVTFTRLNHFVWVMEATKQL 213 (220)
T ss_dssp HHHHHHTTEEEEEEECSSSEEEEEEEECS
T ss_pred HHHHHHCCCEEEEeeccceEEEEeehhhh
Confidence 99999999999888888888888888875
No 8
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.93 E-value=1.6e-24 Score=170.53 Aligned_cols=166 Identities=17% Similarity=0.154 Sum_probs=132.6
Q ss_pred HHHHHHHHhhc----CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc
Q 026688 47 EKEFELMKGYL----KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122 (235)
Q Consensus 47 ~~~~~~i~~~~----~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 122 (235)
....+.+.+.+ ...++.+|||+|||+|..+..+++.. ..+|+|+|+|+.+++.++++....+. ..++++.++|
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d 140 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGS 140 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECC
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcC
Confidence 34456677777 66678999999999999999999873 24999999999999999998877654 4579999999
Q ss_pred cccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHH
Q 026688 123 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSER 202 (235)
Q Consensus 123 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (235)
+.++|++.++||+|++..+++|++++..+++++.++|+|||.+++.++......... ....+.... ......+..
T Consensus 141 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~ 215 (297)
T 2o57_A 141 FLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKS-SIQPILDRI----KLHDMGSLG 215 (297)
T ss_dssp TTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGG-GGHHHHHHH----TCSSCCCHH
T ss_pred cccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchH-HHHHHHHHh----cCCCCCCHH
Confidence 999888888999999999999999999999999999999999999998765322211 122222111 112356899
Q ss_pred HHHHHHHHcCCceeEEEe
Q 026688 203 EIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 203 ~~~~~l~~~Gf~~~~~~~ 220 (235)
++.++++++||+++.+..
T Consensus 216 ~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 216 LYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEEE
Confidence 999999999999887764
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.92 E-value=6.6e-24 Score=162.02 Aligned_cols=166 Identities=19% Similarity=0.229 Sum_probs=135.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
......+.+.+...++.+|||+|||+|.++..+++.++ +++++|+++.+++.+++++...+ ..++.+...|+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 7 HHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKG---VENVRFQQGTAESL 81 (239)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHT---CCSEEEEECBTTBC
T ss_pred CCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcC---CCCeEEEecccccC
Confidence 44556677777878899999999999999999999876 99999999999999999887665 34799999999988
Q ss_pred CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHh--hcCCceeecCHHHH
Q 026688 127 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM--QISGSYTFLSEREI 204 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 204 (235)
+++.++||+|++..+++|++++..+++++.++|+|||.+++.+...... +....+...+. ....+...++.+++
T Consensus 82 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (239)
T 1xxl_A 82 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED----PVLDEFVNHLNRLRDPSHVRESSLSEW 157 (239)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS----HHHHHHHHHHHHHHCTTCCCCCBHHHH
T ss_pred CCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC----hhHHHHHHHHHHhccccccCCCCHHHH
Confidence 8878899999999999999999999999999999999999988765322 22222222111 12345667899999
Q ss_pred HHHHHHcCCceeEEEee
Q 026688 205 EDLCRACGLVDFKCTRN 221 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~~~~ 221 (235)
.++|+++||+++.+...
T Consensus 158 ~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 158 QAMFSANQLAYQDIQKW 174 (239)
T ss_dssp HHHHHHTTEEEEEEEEE
T ss_pred HHHHHHCCCcEEEEEee
Confidence 99999999998776643
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.92 E-value=4.2e-24 Score=164.64 Aligned_cols=168 Identities=15% Similarity=0.124 Sum_probs=135.8
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
+......+.+.+.+...++.+|||+|||+|..+..+++.. ..+++|+|+|+.+++.+++++...+. ..++.+.++|+
T Consensus 19 ~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~ 95 (256)
T 1nkv_A 19 PFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDA 95 (256)
T ss_dssp SCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCC
T ss_pred CCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECCh
Confidence 4466778888888887788999999999999999999875 45999999999999999999877654 34799999999
Q ss_pred ccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHH
Q 026688 124 SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
.+.++ .++||+|++..+++|++++.++++++.++|+|||.+++.++........ ..+...+. ...+..+++..+
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~ 169 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPAT----EEIAQACG-VSSTSDFLTLPG 169 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSS----HHHHHTTT-CSCGGGSCCHHH
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCCh----HHHHHHHh-cccccccCCHHH
Confidence 98876 6889999999999999999999999999999999999988764322111 11111111 223346789999
Q ss_pred HHHHHHHcCCceeEEEe
Q 026688 204 IEDLCRACGLVDFKCTR 220 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~ 220 (235)
+.++++++||+++....
T Consensus 170 ~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 170 LVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp HHHHHHTTTBCCCEEEE
T ss_pred HHHHHHHCCCeeEEEEe
Confidence 99999999999877643
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.92 E-value=1.1e-23 Score=163.39 Aligned_cols=169 Identities=14% Similarity=0.149 Sum_probs=135.6
Q ss_pred CCCHHHHHHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc
Q 026688 44 PGPEKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 122 (235)
+........++..+. ..++.+|||+|||+|.++..+++. +.++|+|+|+|+.+++.+++++...+. ..++++.+.|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d 104 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGS 104 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECC
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcC
Confidence 445667777777776 556899999999999999999988 567999999999999999999887654 3579999999
Q ss_pred cccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHH
Q 026688 123 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSER 202 (235)
Q Consensus 123 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (235)
+.+++++.++||+|++..+++|+ ++..+++++.++|+|||.+++.++..............+.. . ...+.+..
T Consensus 105 ~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~ 177 (267)
T 3kkz_A 105 MDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMD---A---YPEIDTIP 177 (267)
T ss_dssp TTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHH---H---CTTCEEHH
T ss_pred hhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHH---h---CCCCCCHH
Confidence 99888778899999999999999 88999999999999999999998864332222222211111 1 12456889
Q ss_pred HHHHHHHHcCCceeEEEeeC
Q 026688 203 EIEDLCRACGLVDFKCTRNR 222 (235)
Q Consensus 203 ~~~~~l~~~Gf~~~~~~~~~ 222 (235)
++.++++++||+++.+...+
T Consensus 178 ~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 178 NQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp HHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEECC
Confidence 99999999999998876543
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.92 E-value=1.3e-23 Score=162.08 Aligned_cols=169 Identities=14% Similarity=0.148 Sum_probs=134.8
Q ss_pred CCCHHHHHHHHhhc-CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc
Q 026688 44 PGPEKEFELMKGYL-KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122 (235)
Q Consensus 44 ~~~~~~~~~i~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 122 (235)
+........++..+ ...++.+|||+|||+|..+..+++.++ .+|+|+|+|+.+++.+++++...+. ..++++.++|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d 104 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANC--ADRVKGITGS 104 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECC
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECC
Confidence 44667777777777 445678999999999999999999976 4999999999999999999887664 3469999999
Q ss_pred cccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHH
Q 026688 123 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSER 202 (235)
Q Consensus 123 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (235)
+.+++++.++||+|++..+++|+ ++..+++++.++|+|||.+++.++..............+... . ....+.+
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~ 177 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDA---Y---PEISVIP 177 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHH---C---TTCCBHH
T ss_pred hhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHh---C---CCCCCHH
Confidence 99888878899999999999999 788999999999999999999987643322222222221111 1 2256899
Q ss_pred HHHHHHHHcCCceeEEEeeC
Q 026688 203 EIEDLCRACGLVDFKCTRNR 222 (235)
Q Consensus 203 ~~~~~l~~~Gf~~~~~~~~~ 222 (235)
++.++++++||+++.....+
T Consensus 178 ~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 178 TCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp HHHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHCCCeEEEEEECC
Confidence 99999999999998876443
No 13
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.92 E-value=3e-23 Score=167.06 Aligned_cols=179 Identities=12% Similarity=0.117 Sum_probs=139.5
Q ss_pred HHHhhcCCCC-CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-CC
Q 026688 52 LMKGYLKPVL-GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 129 (235)
Q Consensus 52 ~i~~~~~~~~-~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~ 129 (235)
.+++.+...+ +.+|||||||+|.++..+++.+|..+++++|+ +.+++.+++++...+. ..++++..+|+.+.+ +.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDL--GGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--GGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCC--CCceEEEeCCcccCcccC
Confidence 4444555444 78999999999999999999998889999999 8899999998877553 357999999998765 13
Q ss_pred CCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHh-hcCCceeecCHHHHHH
Q 026688 130 SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM-QISGSYTFLSEREIED 206 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 206 (235)
.+.||+|++..++||+++. ..+++++.++|+|||.+++.+...+... ..+....+..... ........++.++|.+
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 324 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDR-VTPALSADFSLHMMVNTNHGELHPTPWIAG 324 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTS-SSSHHHHHHHHHHHHHSTTCCCCCHHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCC-CCCchHHHhhHHHHhhCCCCCcCCHHHHHH
Confidence 4669999999999999876 6899999999999999999998765432 2222222222211 1223455689999999
Q ss_pred HHHHcCCceeEEEeeCcEEEEEEecCCCC
Q 026688 207 LCRACGLVDFKCTRNRGFVMFTATKPSQN 235 (235)
Q Consensus 207 ~l~~~Gf~~~~~~~~~~~~~~~~~k~~~~ 235 (235)
+++++||++++. ..+...+++++||++.
T Consensus 325 ll~~aGf~~~~~-~~g~~~l~~a~kp~~e 352 (352)
T 3mcz_A 325 VVRDAGLAVGER-SIGRYTLLIGQRSSGE 352 (352)
T ss_dssp HHHHTTCEEEEE-EETTEEEEEEECCCC-
T ss_pred HHHHCCCceeee-ccCceEEEEEecCCCC
Confidence 999999999884 4677999999999763
No 14
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.92 E-value=1e-23 Score=163.20 Aligned_cols=167 Identities=16% Similarity=0.175 Sum_probs=134.7
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
+......+.+++.+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++.... .++++.+.|+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~ 111 (266)
T 3ujc_A 38 SGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDI 111 (266)
T ss_dssp TTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCT
T ss_pred cchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECcc
Confidence 3445677888888887788999999999999999999974 359999999999999999876542 5799999999
Q ss_pred ccCCCCCCceeEEEeccccccc--CChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCH
Q 026688 124 SRLPFASSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 201 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (235)
.+.+++.++||+|++..+++|+ +++..+++++.++|+|||.+++.++................ .. .+...++.
T Consensus 112 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~ 186 (266)
T 3ujc_A 112 LTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYV---KQ--RKYTLITV 186 (266)
T ss_dssp TTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHH---HH--HTCCCCCH
T ss_pred ccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHH---hc--CCCCCCCH
Confidence 9988878999999999999999 67789999999999999999999987654222222222211 11 23456899
Q ss_pred HHHHHHHHHcCCceeEEEee
Q 026688 202 REIEDLCRACGLVDFKCTRN 221 (235)
Q Consensus 202 ~~~~~~l~~~Gf~~~~~~~~ 221 (235)
+++.++++++||+++.....
T Consensus 187 ~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 187 EEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp HHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHcCCeEEEEEeC
Confidence 99999999999998877643
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.91 E-value=1.9e-23 Score=160.71 Aligned_cols=177 Identities=16% Similarity=0.163 Sum_probs=132.4
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
...+.+.+...++.+|||+|||+|.++..+++.++. +|+|+|+|+.+++.++++.. ..++.+.++|+.+++++
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~ 105 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIE 105 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCC
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCC
Confidence 445667777667899999999999999999998653 89999999999999998865 34799999999988887
Q ss_pred CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcc--------------cchhHHHHHH-----hHh
Q 026688 130 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFN--------------LIPFSRLLRQ-----NMM 190 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~--------------~~~~~~~~~~-----~~~ 190 (235)
.++||+|++..+++|++++..+++++.++|+|||.+++..+....... ..++...+.. .+.
T Consensus 106 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (253)
T 3g5l_A 106 PDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFL 185 (253)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEET
T ss_pred CCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeec
Confidence 899999999999999999999999999999999999998664311000 0000000000 000
Q ss_pred hcCCceeecCHHHHHHHHHHcCCceeEEE------------------eeCcEEEEEEecCC
Q 026688 191 QISGSYTFLSEREIEDLCRACGLVDFKCT------------------RNRGFVMFTATKPS 233 (235)
Q Consensus 191 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~------------------~~~~~~~~~~~k~~ 233 (235)
........++.+++.++|+++||+++.+. ..+.+.++.++|..
T Consensus 186 ~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~~~~~~~~~~~~~~~P~fl~~~~~~~~ 246 (253)
T 3g5l_A 186 GEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAPELKDLPEMQDEYRRPMMLLISATKQE 246 (253)
T ss_dssp TEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCGGGSSCGGGGGGGTSCCEEEEEEEECC
T ss_pred cccCccEecCHHHHHHHHHHcCCeeeeeecCCCchhhccChhHHHhhcCceEEEEEEeccc
Confidence 00011222399999999999999998887 33456777777654
No 16
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.91 E-value=3.3e-23 Score=161.39 Aligned_cols=171 Identities=20% Similarity=0.255 Sum_probs=132.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
.+.+.+.......++.+|||+|||+|.++..+++.+|..+++++|+++.+++.+++++...+ ..++.+...|+.+.+
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNG---IKNVKFLQANIFSLP 100 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGCC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCcEEEEcccccCC
Confidence 34444455555567899999999999999999999878899999999999999999987765 347999999999988
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCc--ccchhHHHHHHhHh--hcCCceeecCHHH
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF--NLIPFSRLLRQNMM--QISGSYTFLSERE 203 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 203 (235)
++.++||+|++..+++|++++..+++++.++|+|||.+++.++...... ...+........+. ........++..+
T Consensus 101 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (276)
T 3mgg_A 101 FEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQ 180 (276)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGG
T ss_pred CCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHH
Confidence 8789999999999999999999999999999999999999887543211 11121222211111 1112234467789
Q ss_pred HHHHHHHcCCceeEEEee
Q 026688 204 IEDLCRACGLVDFKCTRN 221 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~~ 221 (235)
+..+|+++||+++.+...
T Consensus 181 l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 181 IYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHCCCCeEEEeeE
Confidence 999999999998887644
No 17
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.91 E-value=1.9e-23 Score=163.50 Aligned_cols=164 Identities=16% Similarity=0.190 Sum_probs=124.9
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-CCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FAS 130 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~ 130 (235)
.++..+... +.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+. ..++++.++|+.+.+ ++.
T Consensus 60 ~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKGV--SDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-CC--GGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CcceEEEEcCHHHhhhhcC
Confidence 344444443 67999999999999999999854 999999999999999999877653 357999999998876 667
Q ss_pred CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchh---HHHHHHhH----hhcCCceeecCHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF---SRLLRQNM----MQISGSYTFLSERE 203 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~ 203 (235)
++||+|++..+++|++++..+++++.++|+|||.+++.+++.......... ...+.... .....+..++++++
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQ 214 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHH
Confidence 899999999999999999999999999999999999998865321000000 00000000 01112346789999
Q ss_pred HHHHHHHcCCceeEEEe
Q 026688 204 IEDLCRACGLVDFKCTR 220 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~ 220 (235)
+.++++++||+++.+..
T Consensus 215 l~~~l~~aGf~v~~~~~ 231 (285)
T 4htf_A 215 VYLWLEEAGWQIMGKTG 231 (285)
T ss_dssp HHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHCCCceeeeee
Confidence 99999999999887763
No 18
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.91 E-value=4.7e-23 Score=162.80 Aligned_cols=171 Identities=15% Similarity=0.147 Sum_probs=131.2
Q ss_pred CCCCeEEEecCCCchHHHHHH-HcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 60 VLGGNIIDASCGSGLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~-~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
.++.+|||+|||+|..+..++ ...+..+|+++|+|+.+++.+++++...+. ..++++.++|+.+.+++ ++||+|++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL--AGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT--GGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECchhcCCcc-CCeEEEEE
Confidence 457899999999999999986 456678999999999999999999877653 34699999999998876 89999999
Q ss_pred cccccccCChHH---HHHHHHHhccCCcEEEEEEeccCCCcc-cch-----h---HHHH-HHhHh-h-cCCceeecCHHH
Q 026688 139 GAAIHCWSSPST---GVAEISRVLRPGGVFVGTTYIVDGPFN-LIP-----F---SRLL-RQNMM-Q-ISGSYTFLSERE 203 (235)
Q Consensus 139 ~~~l~~~~~~~~---~l~~~~~~L~pgG~li~~~~~~~~~~~-~~~-----~---~~~~-~~~~~-~-~~~~~~~~~~~~ 203 (235)
..+++|++++.. +++++.++|+|||.+++.+........ ... . .... ...+. . ......+++.++
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 999999998864 799999999999999998876532111 111 0 0010 01111 1 112235689999
Q ss_pred HHHHHHHcCCceeEEEe--eCcEEEEEEecCC
Q 026688 204 IEDLCRACGLVDFKCTR--NRGFVMFTATKPS 233 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~--~~~~~~~~~~k~~ 233 (235)
+.++++++||+++.+.. .+.+..++++||.
T Consensus 274 ~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kpa 305 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDDRARLFPTVIARKPA 305 (305)
T ss_dssp HHHHHHHTTCEEEEEECCTTSSSCEEEEECCC
T ss_pred HHHHHHHCCCEEEEEEcccCceeeEEEEecCC
Confidence 99999999999988874 3456678888874
No 19
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.91 E-value=9.9e-23 Score=161.44 Aligned_cols=162 Identities=16% Similarity=0.124 Sum_probs=130.7
Q ss_pred HHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 51 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 51 ~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
+.+.+.+. ..++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++...+. ..++++.++|+.+.+++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSCCCC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcCCCC
Confidence 34666666 6678899999999999999999873 24999999999999999999887664 34799999999998887
Q ss_pred CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCc-ccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 130 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF-NLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
.++||+|++..+++|+ ++..+++++.++|+|||.+++.++...... ........+.... ...+++.+++.+++
T Consensus 183 ~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~l 256 (312)
T 3vc1_A 183 KGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHF-----ECNIHSRREYLRAM 256 (312)
T ss_dssp TTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHH-----TCCCCBHHHHHHHH
T ss_pred CCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhh-----cCCCCCHHHHHHHH
Confidence 8899999999999999 588999999999999999999988765422 2222332222211 12367899999999
Q ss_pred HHcCCceeEEEee
Q 026688 209 RACGLVDFKCTRN 221 (235)
Q Consensus 209 ~~~Gf~~~~~~~~ 221 (235)
+++||+++.+...
T Consensus 257 ~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 257 ADNRLVPHTIVDL 269 (312)
T ss_dssp HTTTEEEEEEEEC
T ss_pred HHCCCEEEEEEeC
Confidence 9999998887753
No 20
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.91 E-value=2.8e-22 Score=161.79 Aligned_cols=177 Identities=16% Similarity=0.161 Sum_probs=138.3
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+.+.+...++.+|||+|||+|.++..+++..|..+++++|+ +.+++.+++++...+. ..++++..+|+.+.++
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV--ADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--TTTEEEEECCTTTSCC
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC--CCCEEEEeCccccCCC
Confidence 345566666666678999999999999999999988889999999 9999999999877653 3469999999988765
Q ss_pred CCCceeEEEecccccccCC--hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhh---cCCceeecCHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ---ISGSYTFLSERE 203 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 203 (235)
+. +|+|++..+++++++ ..++++++.++|+|||.+++.+...+.. ..+....+...+.. ......+++.++
T Consensus 255 ~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~t~~e 330 (359)
T 1x19_A 255 PE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP--ENPNFDYLSHYILGAGMPFSVLGFKEQAR 330 (359)
T ss_dssp CC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT--TSCCHHHHHHHGGGGGSSCCCCCCCCGGG
T ss_pred CC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC--CCchHHHHHHHHHhcCCCCcccCCCCHHH
Confidence 43 399999999999987 5789999999999999999988776432 12222222211111 111234589999
Q ss_pred HHHHHHHcCCceeEEEeeCcEEEEEEecC
Q 026688 204 IEDLCRACGLVDFKCTRNRGFVMFTATKP 232 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~k~ 232 (235)
|.++++++||+++++...+...++.++||
T Consensus 331 ~~~ll~~aGf~~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 331 YKEILESLGYKDVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp HHHHHHHHTCEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHCCCceEEEEecCCceEEEEeCC
Confidence 99999999999988877667778888886
No 21
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.91 E-value=6.6e-23 Score=156.62 Aligned_cols=159 Identities=19% Similarity=0.301 Sum_probs=128.4
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+...+.. +.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.. ..++++.+.|+.+
T Consensus 40 ~~~~~~~l~~~~~~--~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~ 109 (242)
T 3l8d_A 40 RSTIIPFFEQYVKK--EAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERGE------GPDLSFIKGDLSS 109 (242)
T ss_dssp TTTHHHHHHHHSCT--TCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTTC------BTTEEEEECBTTB
T ss_pred HHHHHHHHHHHcCC--CCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhcc------cCCceEEEcchhc
Confidence 34556666666653 78999999999999999999865 99999999999999988642 4579999999999
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHH
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 205 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (235)
.+++.++||+|++..+++|++++..+++++.++|+|||.+++.++..........+ . .......+...+++.++.
T Consensus 110 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~ 184 (242)
T 3l8d_A 110 LPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSY----P-RLYGKDVVCNTMMPWEFE 184 (242)
T ss_dssp CSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG----G-GGGTCCCSSCCCCHHHHH
T ss_pred CCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh----h-hhccccccccCCCHHHHH
Confidence 88878999999999999999999999999999999999999998765432111111 1 111223345678999999
Q ss_pred HHHHHcCCceeEEE
Q 026688 206 DLCRACGLVDFKCT 219 (235)
Q Consensus 206 ~~l~~~Gf~~~~~~ 219 (235)
++++++||+++...
T Consensus 185 ~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 185 QLVKEQGFKVVDGI 198 (242)
T ss_dssp HHHHHTTEEEEEEE
T ss_pred HHHHHcCCEEEEee
Confidence 99999999988775
No 22
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.90 E-value=2.1e-23 Score=159.92 Aligned_cols=146 Identities=11% Similarity=0.053 Sum_probs=117.6
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.|+++... ++++.+.|+.+. .+.++||+|++..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~-------~v~~~~~d~~~~-~~~~~fD~v~~~~ 111 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD-------GITYIHSRFEDA-QLPRRYDNIVLTH 111 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS-------CEEEEESCGGGC-CCSSCEEEEEEES
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC-------CeEEEEccHHHc-CcCCcccEEEEhh
Confidence 467999999999999999999877 899999999999999987531 689999999887 3568899999999
Q ss_pred cccccCChHHHHHHHH-HhccCCcEEEEEEeccCCCcccchhHHHHHHh---------HhhcCCceeecCHHHHHHHHHH
Q 026688 141 AIHCWSSPSTGVAEIS-RVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN---------MMQISGSYTFLSEREIEDLCRA 210 (235)
Q Consensus 141 ~l~~~~~~~~~l~~~~-~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~ 210 (235)
+++|++++..+++++. ++|+|||.+++.+++..... ......... ......+...++.+++.+++++
T Consensus 112 ~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 188 (250)
T 2p7i_A 112 VLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVS---RQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASR 188 (250)
T ss_dssp CGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHH---HHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred HHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHH---HHHHHHcCccccchhcccccccccccccCCHHHHHHHHHH
Confidence 9999999999999999 99999999999998754210 000000000 0012345567899999999999
Q ss_pred cCCceeEEE
Q 026688 211 CGLVDFKCT 219 (235)
Q Consensus 211 ~Gf~~~~~~ 219 (235)
+||+++...
T Consensus 189 ~Gf~~~~~~ 197 (250)
T 2p7i_A 189 AGLQVTYRS 197 (250)
T ss_dssp TTCEEEEEE
T ss_pred CCCeEEEEe
Confidence 999988775
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.90 E-value=2.6e-23 Score=156.46 Aligned_cols=168 Identities=15% Similarity=0.089 Sum_probs=123.7
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCC--CCCeeEEeccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP--KENFLLVRADI 123 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~--~~~~~~~~~d~ 123 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++...+... ..++++.++|+
T Consensus 14 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (217)
T 3jwh_A 14 NQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL 93 (217)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc
Confidence 3455667777776666889999999999999999998877799999999999999999987554210 12799999999
Q ss_pred ccCCCCCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCH
Q 026688 124 SRLPFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 201 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (235)
...+.+.++||+|++..+++|++++ ..+++++.++|+|||.+++..... .......+.........+...++.
T Consensus 94 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 168 (217)
T 3jwh_A 94 TYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIE-----YNVKFANLPAGKLRHKDHRFEWTR 168 (217)
T ss_dssp TSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHH-----HHHHTC-----------CCSCBCH
T ss_pred ccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcc-----cchhhcccccccccccccccccCH
Confidence 7776666899999999999999876 799999999999999666554321 000000011111112344556899
Q ss_pred HHHH----HHHHHcCCceeEE
Q 026688 202 REIE----DLCRACGLVDFKC 218 (235)
Q Consensus 202 ~~~~----~~l~~~Gf~~~~~ 218 (235)
+++. ++++++||++...
T Consensus 169 ~~l~~~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 169 SQFQNWANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHHHHHHcCceEEEE
Confidence 9998 8999999987554
No 24
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.90 E-value=1e-22 Score=151.61 Aligned_cols=140 Identities=11% Similarity=0.127 Sum_probs=119.1
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEeccc
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 141 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 141 (235)
+.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.+.++|+.+.+++.++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 68999999999999999999865 999999999999999987 34789999999998877889999999999
Q ss_pred ccccC--ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 142 IHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 142 l~~~~--~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
++|++ ++..+++++.++|+|||.+++.++....... +.....+...++.+++.++++++||+++.+.
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEP-----------MYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE-----------ECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh-----------hhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 99997 7789999999999999999999987643110 1112234567899999999999999998887
Q ss_pred eeC
Q 026688 220 RNR 222 (235)
Q Consensus 220 ~~~ 222 (235)
..+
T Consensus 181 ~~~ 183 (203)
T 3h2b_A 181 WDP 183 (203)
T ss_dssp ECT
T ss_pred ecC
Confidence 544
No 25
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.90 E-value=3e-23 Score=157.96 Aligned_cols=153 Identities=17% Similarity=0.214 Sum_probs=121.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
...+..+....... +.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...+. ..++++.++|+.+.
T Consensus 53 ~~~l~~~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~ 127 (235)
T 3lcc_A 53 TPLIVHLVDTSSLP-LGRALVPGCGGGHDVVAMASPE--RFVVGLDISESALAKANETYGSSPK--AEYFSFVKEDVFTW 127 (235)
T ss_dssp CHHHHHHHHTTCSC-CEEEEEETCTTCHHHHHHCBTT--EEEEEECSCHHHHHHHHHHHTTSGG--GGGEEEECCCTTTC
T ss_pred CHHHHHHHHhcCCC-CCCEEEeCCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHhhccCC--CcceEEEECchhcC
Confidence 33444444444433 4699999999999999998754 4899999999999999998875322 35799999999987
Q ss_pred CCCCCceeEEEecccccccC--ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHH
Q 026688 127 PFASSSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 204 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (235)
+ +.++||+|++..+++|++ +...+++++.++|+|||.+++..+..... ..+....++.+++
T Consensus 128 ~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----------------~~~~~~~~~~~~~ 190 (235)
T 3lcc_A 128 R-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH----------------VGGPPYKVDVSTF 190 (235)
T ss_dssp C-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC----------------CSCSSCCCCHHHH
T ss_pred C-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc----------------CCCCCccCCHHHH
Confidence 6 456999999999999998 67899999999999999999988765321 1122234789999
Q ss_pred HHHHHHcCCceeEEEee
Q 026688 205 EDLCRACGLVDFKCTRN 221 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~~~~ 221 (235)
.++++++||+++.+...
T Consensus 191 ~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 191 EEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp HHHHGGGTEEEEEEEEC
T ss_pred HHHHHHcCCeEEEEEec
Confidence 99999999999888743
No 26
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.90 E-value=3.8e-22 Score=161.45 Aligned_cols=173 Identities=11% Similarity=0.080 Sum_probs=135.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
..+.+.+...+..+|||+|||+|.++..+++..|..+++++|+ +.+++.+++++...+. ..++++..+|+. .+++.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l--~~~v~~~~~d~~-~~~p~ 267 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL--ADRCEILPGDFF-ETIPD 267 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTT-TCCCS
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc--CCceEEeccCCC-CCCCC
Confidence 4455556656678999999999999999999998889999999 9999999999887654 458999999998 45554
Q ss_pred CceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
.||+|++..++|+++++. +++++++++|+|||++++.+...+... .+. ..+.............++.++|.+++
T Consensus 268 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~--~~~-~~~~d~~~~~~~~g~~~t~~e~~~ll 343 (369)
T 3gwz_A 268 -GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERP--AAS-TLFVDLLLLVLVGGAERSESEFAALL 343 (369)
T ss_dssp -SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSC--CHH-HHHHHHHHHHHHSCCCBCHHHHHHHH
T ss_pred -CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCC--CCc-hhHhhHHHHhhcCCccCCHHHHHHHH
Confidence 899999999999999875 799999999999999999998765422 121 22221111111234568999999999
Q ss_pred HHcCCceeEEEe--eCcEEEEEEec
Q 026688 209 RACGLVDFKCTR--NRGFVMFTATK 231 (235)
Q Consensus 209 ~~~Gf~~~~~~~--~~~~~~~~~~k 231 (235)
+++||+++++.. .+...++.+++
T Consensus 344 ~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 344 EKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred HHCCCeEEEEEECCCCCcEEEEEEe
Confidence 999999999876 34566666664
No 27
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.90 E-value=6.5e-23 Score=160.00 Aligned_cols=157 Identities=22% Similarity=0.273 Sum_probs=123.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
+.+.+.+...++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++++. .++.+.++|+.++++ .
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~ 115 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQNY--------PHLHFDVADARNFRV-D 115 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTTCCC-S
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhhC--------CCCEEEECChhhCCc-C
Confidence 34555566666889999999999999999984 459999999999999998864 368899999998876 5
Q ss_pred CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhh-------cCCceeecCHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ-------ISGSYTFLSERE 203 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 203 (235)
++||+|++..+++|++++..+++++.++|+|||.+++..+.... ...+...+...+.. ...+..+++.++
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGN---IKYILEALYNALETLGIHNPQALNPWYFPSIGE 192 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTT---THHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHH
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcc---hHHHHHHHHHHHHhcCCccccCcCceeCCCHHH
Confidence 78999999999999999999999999999999999998876532 12222222221111 122345779999
Q ss_pred HHHHHHHcCCceeEEEee
Q 026688 204 IEDLCRACGLVDFKCTRN 221 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~~ 221 (235)
+.++|+++||+++.....
T Consensus 193 ~~~~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 193 YVNILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEEe
Confidence 999999999998776644
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.90 E-value=5.6e-23 Score=154.78 Aligned_cols=167 Identities=16% Similarity=0.156 Sum_probs=123.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCC--CCCeeEEecccc
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP--KENFLLVRADIS 124 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~--~~~~~~~~~d~~ 124 (235)
....+.+.+.+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++...+... ..++++.++|+.
T Consensus 15 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 15 QQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 344566666666566889999999999999999998877899999999999999999886543200 027999999998
Q ss_pred cCCCCCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHH
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSER 202 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (235)
..+.+.++||+|++..+++|++++ ..+++++.++|+|||.++.. ++.......... . ........+...++.+
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~-~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~ 169 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST-PNKEYNFHYGNL-F---EGNLRHRDHRFEWTRK 169 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE-EBGGGGGCCCCT---------GGGCCTTSBCHH
T ss_pred ccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc-cchhhhhhhccc-C---cccccccCceeeecHH
Confidence 777667899999999999999876 68999999999999955544 433210000000 0 0001123445568899
Q ss_pred HHH----HHHHHcCCceeEE
Q 026688 203 EIE----DLCRACGLVDFKC 218 (235)
Q Consensus 203 ~~~----~~l~~~Gf~~~~~ 218 (235)
++. ++++++||++...
T Consensus 170 ~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 170 EFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHCCcEEEEE
Confidence 988 8899999987555
No 29
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.90 E-value=2.3e-22 Score=153.87 Aligned_cols=179 Identities=15% Similarity=0.107 Sum_probs=130.9
Q ss_pred HHHHHHHhhcCCC--CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 48 KEFELMKGYLKPV--LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 48 ~~~~~i~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
...+.+.+.+... ++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++....+ .++.+.+.|+.+
T Consensus 22 ~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~ 95 (246)
T 1y8c_A 22 KWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISN 95 (246)
T ss_dssp HHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGG
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcC----CCeEEEeccccc
Confidence 3444555544332 578999999999999999999865 89999999999999999887643 278999999998
Q ss_pred CCCCCCceeEEEecc-cccccC---ChHHHHHHHHHhccCCcEEEEEEeccCCCcccch---h---HHHHHHhHh-----
Q 026688 126 LPFASSSIDAVHAGA-AIHCWS---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIP---F---SRLLRQNMM----- 190 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~-~l~~~~---~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~---~---~~~~~~~~~----- 190 (235)
.+++ ++||+|++.. +++|++ ++..+++++.++|+|||.+++..++........+ + .......+.
T Consensus 96 ~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (246)
T 1y8c_A 96 LNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFED 174 (246)
T ss_dssp CCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEET
T ss_pred CCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCC
Confidence 8766 8899999998 999994 4568999999999999999997765321000000 0 000000000
Q ss_pred --------------------hcCCceeecCHHHHHHHHHHcCCceeEEEee---------CcEEEEEEecCC
Q 026688 191 --------------------QISGSYTFLSEREIEDLCRACGLVDFKCTRN---------RGFVMFTATKPS 233 (235)
Q Consensus 191 --------------------~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~---------~~~~~~~~~k~~ 233 (235)
....+.++++.+++.++|+++||+++.+... ....+++++|+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~~ 246 (246)
T 1y8c_A 175 DLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLGG 246 (246)
T ss_dssp TEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEECC
T ss_pred ceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEecC
Confidence 0011246789999999999999999888632 356788999874
No 30
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.90 E-value=4.3e-22 Score=149.07 Aligned_cols=147 Identities=21% Similarity=0.263 Sum_probs=119.2
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
...+..++..+. ++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++. ++.+...|+...
T Consensus 31 ~~~~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~ 97 (211)
T 3e23_A 31 SATLTKFLGELP--AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQL 97 (211)
T ss_dssp CHHHHHHHTTSC--TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGC
T ss_pred hHHHHHHHHhcC--CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccC
Confidence 344445555444 378999999999999999999854 9999999999999999875 356788899887
Q ss_pred CCCCCceeEEEecccccccC--ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHH
Q 026688 127 PFASSSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 204 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (235)
+ +.++||+|++..+++|++ +...+++++.++|+|||.+++..+....... ........+++.+++
T Consensus 98 ~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 164 (211)
T 3e23_A 98 D-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR------------DKLARYYNYPSEEWL 164 (211)
T ss_dssp C-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE------------CTTSCEECCCCHHHH
T ss_pred C-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc------------cccchhccCCCHHHH
Confidence 7 678999999999999998 6679999999999999999998776542110 112234567899999
Q ss_pred HHHHHHcC-CceeEEE
Q 026688 205 EDLCRACG-LVDFKCT 219 (235)
Q Consensus 205 ~~~l~~~G-f~~~~~~ 219 (235)
.++++++| |+++.+.
T Consensus 165 ~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 165 RARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHHCCCSEEEEE
T ss_pred HHHHHhCCCcEEEEEE
Confidence 99999999 9988776
No 31
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=2.6e-22 Score=154.84 Aligned_cols=159 Identities=11% Similarity=0.035 Sum_probs=123.8
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
......+++.+...++.+|||+|||+|.++..+++..+..+++++|+|+.+++.++++ ..++.+...|+.+.
T Consensus 19 ~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~ 90 (259)
T 2p35_A 19 TRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATW 90 (259)
T ss_dssp GHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhc
Confidence 3445567777777778999999999999999999986667999999999999999987 23688999999887
Q ss_pred CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHh--Hhhc-----CCceeec
Q 026688 127 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN--MMQI-----SGSYTFL 199 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~ 199 (235)
+ +.++||+|++..+++|++++..+++++.++|+|||.+++.++..... ........+... +... ..+..++
T Consensus 91 ~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (259)
T 2p35_A 91 K-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE-PTHIAMHETADGGPWKDAFSGGGLRRKPLP 168 (259)
T ss_dssp C-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS-HHHHHHHHHHHHSTTGGGC-------CCCC
T ss_pred C-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc-HHHHHHHHHhcCcchHHHhccccccccCCC
Confidence 7 67899999999999999999999999999999999999998754211 111111111111 1111 1245678
Q ss_pred CHHHHHHHHHHcCCce
Q 026688 200 SEREIEDLCRACGLVD 215 (235)
Q Consensus 200 ~~~~~~~~l~~~Gf~~ 215 (235)
+.+++.++|+++||++
T Consensus 169 ~~~~~~~~l~~aGf~v 184 (259)
T 2p35_A 169 PPSDYFNALSPKSSRV 184 (259)
T ss_dssp CHHHHHHHHGGGEEEE
T ss_pred CHHHHHHHHHhcCCce
Confidence 9999999999999974
No 32
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.90 E-value=5.3e-22 Score=158.75 Aligned_cols=178 Identities=12% Similarity=0.137 Sum_probs=135.5
Q ss_pred HHHHHhhcCC--CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 50 FELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 50 ~~~i~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
...+.+.+.. .++.+|||+|||+|..+..+++..|..+++++|++ .+++.+++++...+. ..++++...|+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV--ASRYHTIAGSAFEVD 228 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC--GGGEEEEESCTTTSC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC--CcceEEEecccccCC
Confidence 3455555554 56789999999999999999999887899999999 999999998876653 346999999998766
Q ss_pred CCCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhH-hhcCCceeecCHHHH
Q 026688 128 FASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM-MQISGSYTFLSEREI 204 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 204 (235)
++. .||+|++..+++|++++ .++++++.++|+|||.+++.++...... ..+....+.... .........++.+++
T Consensus 229 ~~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 306 (335)
T 2r3s_A 229 YGN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDR-ITPPDAAAFSLVMLATTPNGDAYTFAEY 306 (335)
T ss_dssp CCS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTS-SCSHHHHHHHHHHHHHSSSCCCCCHHHH
T ss_pred CCC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCc-CCchHHHHHHHHHHeeCCCCCcCCHHHH
Confidence 554 49999999999999765 5899999999999999999988764321 122222222211 112224567899999
Q ss_pred HHHHHHcCCceeEEEeeC-cEEEEEEecC
Q 026688 205 EDLCRACGLVDFKCTRNR-GFVMFTATKP 232 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~~~~~-~~~~~~~~k~ 232 (235)
.++++++||+++++...+ ...++++++|
T Consensus 307 ~~ll~~aGf~~~~~~~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 307 ESMFSNAGFSHSQLHSLPTTQQQVIVAYK 335 (335)
T ss_dssp HHHHHHTTCSEEEEECCTTSSSEEEEEEC
T ss_pred HHHHHHCCCCeeeEEECCCCceeEEEecC
Confidence 999999999998887654 3455666543
No 33
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.90 E-value=1.4e-22 Score=156.74 Aligned_cols=161 Identities=19% Similarity=0.230 Sum_probs=121.1
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc-
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA- 140 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~- 140 (235)
+.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++. .++.+.++|+.+.++ .++||+|++..
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~fD~v~~~~~ 119 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRN--------PDAVLHHGDMRDFSL-GRRFSAVTCMFS 119 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTCCC-SCCEEEEEECTT
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhC--------CCCEEEECChHHCCc-cCCcCEEEEcCc
Confidence 68999999999999999999876 8999999999999999873 368899999998876 68999999998
Q ss_pred cccccCC---hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhH-------H----HHHH------------hH-----
Q 026688 141 AIHCWSS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS-------R----LLRQ------------NM----- 189 (235)
Q Consensus 141 ~l~~~~~---~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~-------~----~~~~------------~~----- 189 (235)
+++|+++ ...+++++.++|+|||.+++..+..........+. . .++. .+
T Consensus 120 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (263)
T 3pfg_A 120 SIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGP 199 (263)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEET
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecC
Confidence 9999964 35889999999999999999754332110000000 0 0000 00
Q ss_pred ----h--hcCCceeecCHHHHHHHHHHcCCceeEEEee-CcEEEEEEecCC
Q 026688 190 ----M--QISGSYTFLSEREIEDLCRACGLVDFKCTRN-RGFVMFTATKPS 233 (235)
Q Consensus 190 ----~--~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~~~~~~~~~k~~ 233 (235)
. ......++++.+++.++|+++||+++.+... ....+++++||.
T Consensus 200 ~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a 250 (263)
T 3pfg_A 200 DRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGA 250 (263)
T ss_dssp TTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC
T ss_pred CCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCC
Confidence 0 0001256789999999999999999888643 456778888874
No 34
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.89 E-value=2e-22 Score=153.08 Aligned_cols=162 Identities=19% Similarity=0.234 Sum_probs=125.4
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCC--CCCeeEEecccccCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP--KENFLLVRADISRLPFA 129 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~--~~~~~~~~~d~~~~~~~ 129 (235)
.+...+. ++.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++...+... ..++.+.+.|+...+++
T Consensus 23 ~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (235)
T 3sm3_A 23 IIHNYLQ--EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH 98 (235)
T ss_dssp THHHHCC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC
T ss_pred HHHHhCC--CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC
Confidence 4444444 378999999999999999999854 99999999999999999887654211 12579999999988887
Q ss_pred CCceeEEEecccccccCChH---HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhc--------------
Q 026688 130 SSSIDAVHAGAAIHCWSSPS---TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI-------------- 192 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~~---~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 192 (235)
.++||+|++..+++|++++. .+++++.++|+|||.+++.++...... ..+...+...+...
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL--KLYRKRYLHDFPITKEEGSFLARDPETG 176 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS--HHHHHHHHHHHHHHCSTTEEEEECTTTC
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhH--HHHHHHhhhhccchhhhcceEecccccC
Confidence 88999999999999999987 899999999999999999988764211 11111111111110
Q ss_pred --CCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 193 --SGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 193 --~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
..+.+.++.+++.++++++||+++.+.
T Consensus 177 ~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 177 ETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp CEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred CcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 112467899999999999999988775
No 35
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.89 E-value=2.7e-22 Score=154.30 Aligned_cols=155 Identities=12% Similarity=0.056 Sum_probs=124.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
..++..+...++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.++++.... .++++.+.|+.+.+++.
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCCS
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCCCC
Confidence 455556666668999999999999999998876 357999999999999999987542 46899999999888777
Q ss_pred CceeEEEecccccccCC--hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 131 SSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
++||+|++..+++|+++ +..+++++.++|+|||.+++.++........ .....+...++.+++.+++
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL-----------VDKEDSSLTRSDIHYKRLF 225 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE-----------EETTTTEEEBCHHHHHHHH
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccce-----------ecccCCcccCCHHHHHHHH
Confidence 89999999999999954 6799999999999999999998644221110 0112334567999999999
Q ss_pred HHcCCceeEEEeeC
Q 026688 209 RACGLVDFKCTRNR 222 (235)
Q Consensus 209 ~~~Gf~~~~~~~~~ 222 (235)
+++||+++......
T Consensus 226 ~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 226 NESGVRVVKEAFQE 239 (254)
T ss_dssp HHHTCCEEEEEECT
T ss_pred HHCCCEEEEeeecC
Confidence 99999998886443
No 36
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.89 E-value=4.8e-22 Score=149.40 Aligned_cols=170 Identities=17% Similarity=0.117 Sum_probs=124.5
Q ss_pred HHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 51 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 51 ~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
..+.+.+. ..++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++ .+ ..++++.++|+.+. ++
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~----~~---~~~~~~~~~d~~~~-~~ 104 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGR----HG---LDNVEFRQQDLFDW-TP 104 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGG----GC---CTTEEEEECCTTSC-CC
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHh----cC---CCCeEEEecccccC-CC
Confidence 34444443 44568999999999999999999854 99999999999999987 11 35799999999887 56
Q ss_pred CCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHh---hcCC----ceeecC
Q 026688 130 SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM---QISG----SYTFLS 200 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~ 200 (235)
.++||+|++..+++|++++ ..+++++.++|+|||.+++.++..........+.......+. .... ...+++
T Consensus 105 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRS 184 (218)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCC
T ss_pred CCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCC
Confidence 7899999999999999986 789999999999999999999876321100000000000000 0111 123579
Q ss_pred HHHHHHHHHHcCCceeEEEeeCcEEEEEEe
Q 026688 201 EREIEDLCRACGLVDFKCTRNRGFVMFTAT 230 (235)
Q Consensus 201 ~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~ 230 (235)
++++.++++++||++......+.....+++
T Consensus 185 ~~~~~~~l~~aGf~v~~~~~~~~~~~~~~~ 214 (218)
T 3ou2_A 185 PAELTERLTALGWSCSVDEVHPGFLYATCR 214 (218)
T ss_dssp HHHHHHHHHHTTEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEeeeccccceEeecC
Confidence 999999999999997666666666666655
No 37
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.89 E-value=1.6e-21 Score=153.85 Aligned_cols=168 Identities=13% Similarity=0.063 Sum_probs=129.1
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+.+.+...++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|++++...+. ..++++...|+.++
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~-- 134 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWEEF-- 134 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGGGC--
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHHHc--
Confidence 345567777777789999999999999999999843 5999999999999999999887664 34799999999875
Q ss_pred CCCceeEEEecccccccCCh---------HHHHHHHHHhccCCcEEEEEEeccCCCcccchh-------HHHHHHhHhh-
Q 026688 129 ASSSIDAVHAGAAIHCWSSP---------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF-------SRLLRQNMMQ- 191 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~---------~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~-------~~~~~~~~~~- 191 (235)
.++||+|++..+++|++++ ..+++++.++|+|||.+++.++........... ...+...+..
T Consensus 135 -~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTE 213 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred -CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHh
Confidence 5889999999999999776 689999999999999999999876431100000 0000011111
Q ss_pred cCCceeecCHHHHHHHHHHcCCceeEEEeeC
Q 026688 192 ISGSYTFLSEREIEDLCRACGLVDFKCTRNR 222 (235)
Q Consensus 192 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 222 (235)
........+.+++.++++++||+++.....+
T Consensus 214 ~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 214 IFPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp TCTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred cCCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 1122356789999999999999998886544
No 38
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.89 E-value=1.6e-21 Score=156.78 Aligned_cols=177 Identities=14% Similarity=0.139 Sum_probs=137.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
..+.+........+|||||||+|.++..+++++|..+++..|. |.+++.+++++...+ ..++++..+|+.+.+.
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~---~~rv~~~~gD~~~~~~-- 242 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE---EEQIDFQEGDFFKDPL-- 242 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCC--
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc---cCceeeecCccccCCC--
Confidence 3444555555568999999999999999999999999999997 889999998876543 4689999999987554
Q ss_pred CceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
..+|+|++..++|++++.+ ++|+++++.|+|||.+++.+...+.. ...+....+.............+|.++|+++|
T Consensus 243 ~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~-~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDED-RRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTT-SCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCC-CCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 3579999999999999874 78999999999999999999876432 22333333332222222334567999999999
Q ss_pred HHcCCceeEEEeeC-cEEEEEEecCCC
Q 026688 209 RACGLVDFKCTRNR-GFVMFTATKPSQ 234 (235)
Q Consensus 209 ~~~Gf~~~~~~~~~-~~~~~~~~k~~~ 234 (235)
+++||+++++...+ ...+++|+|--+
T Consensus 322 ~~AGf~~v~v~~~~~~~~~i~ArKgt~ 348 (353)
T 4a6d_A 322 SSAGFRDFQFKKTGAIYDAILARKGTH 348 (353)
T ss_dssp HHHTCEEEEEECCSSSCEEEEEECCCC
T ss_pred HHCCCceEEEEEcCCceEEEEEEecCc
Confidence 99999999987655 567889998654
No 39
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.89 E-value=1.3e-21 Score=153.18 Aligned_cols=167 Identities=18% Similarity=0.159 Sum_probs=127.0
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+++.+...++.+|||+|||+|.++..+++... .+|+|+|+|+.+++.+++++...+. ..++++...|+.+++
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~- 127 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSEN--LRSKRVLLAGWEQFD- 127 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCC--CSCEEEEESCGGGCC-
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCC--CCCeEEEECChhhCC-
Confidence 445666777777788999999999999999985432 3999999999999999999876654 357999999997765
Q ss_pred CCCceeEEEeccccccc--CChHHHHHHHHHhccCCcEEEEEEeccCCCcc----cch--h-HHHHHHhH-hhcCCceee
Q 026688 129 ASSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFN----LIP--F-SRLLRQNM-MQISGSYTF 198 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~----~~~--~-~~~~~~~~-~~~~~~~~~ 198 (235)
++||+|++..+++|+ .++..+++++.++|+|||.+++.++....... ..+ . .......+ .........
T Consensus 128 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (287)
T 1kpg_A 128 --EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRL 205 (287)
T ss_dssp --CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCC
T ss_pred --CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCC
Confidence 789999999999999 56789999999999999999999987643111 000 0 00111111 112223456
Q ss_pred cCHHHHHHHHHHcCCceeEEEee
Q 026688 199 LSEREIEDLCRACGLVDFKCTRN 221 (235)
Q Consensus 199 ~~~~~~~~~l~~~Gf~~~~~~~~ 221 (235)
.+.+++.++++++||+++.....
T Consensus 206 ~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 206 PSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp CCHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcEEEEEEeC
Confidence 79999999999999999887643
No 40
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.89 E-value=7.9e-22 Score=152.40 Aligned_cols=156 Identities=19% Similarity=0.180 Sum_probs=119.7
Q ss_pred CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEE
Q 026688 58 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 137 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 137 (235)
...++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.+++++ ... ..++.+..+|+.+.+++.++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~-~~~---~~~~~~~~~d~~~~~~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKI-AGV---DRKVQVVQADARAIPLPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHT-TTS---CTTEEEEESCTTSCCSCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHh-hcc---CCceEEEEcccccCCCCCCCeeEEE
Confidence 44567899999999999999999875 49999999999999999987 221 4579999999998887788999999
Q ss_pred ecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhc----CCceeecCHHHHHHHHHHcCC
Q 026688 138 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI----SGSYTFLSEREIEDLCRACGL 213 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Gf 213 (235)
+..+++|++++..+++++.++|+|||.+++. +..........+...+....... ..+...++.+++.++++++||
T Consensus 110 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 188 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGL 188 (263)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred ECCchhhcCCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999988 32211111001222222222111 113456789999999999999
Q ss_pred ceeEEEe
Q 026688 214 VDFKCTR 220 (235)
Q Consensus 214 ~~~~~~~ 220 (235)
+++....
T Consensus 189 ~~~~~~~ 195 (263)
T 2yqz_A 189 KPRTREV 195 (263)
T ss_dssp CCEEEEE
T ss_pred CcceEEE
Confidence 9766543
No 41
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.89 E-value=3.8e-22 Score=159.37 Aligned_cols=164 Identities=14% Similarity=0.059 Sum_probs=127.8
Q ss_pred CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEE
Q 026688 58 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 137 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 137 (235)
...+..+|||+|||+|.++..+++..|..+++++|+ +.+++.+++++...+. ..++++...|+. .+.+. .||+|+
T Consensus 166 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~-~~~p~-~~D~v~ 240 (332)
T 3i53_A 166 DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL--SGRAQVVVGSFF-DPLPA-GAGGYV 240 (332)
T ss_dssp CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTT-SCCCC-SCSEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc--CcCeEEecCCCC-CCCCC-CCcEEE
Confidence 334468999999999999999999998889999999 9999999999887654 458999999997 34444 899999
Q ss_pred ecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCce
Q 026688 138 AGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 215 (235)
Q Consensus 138 ~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 215 (235)
+..++||++++ .+++++++++|+|||++++.+...+.. ....... +.. + .....+.++.++|.++++++||++
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~d-~~~-~--~~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HAGTGMD-LRM-L--TYFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----CCHHHH-HHH-H--HHHSCCCCCHHHHHHHHHHTTEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-CccHHHH-HHH-H--hhCCCCCCCHHHHHHHHHHCCCEE
Confidence 99999999986 689999999999999999998876543 1111111 111 1 112345679999999999999999
Q ss_pred eEEEeeCcEEEEEEec
Q 026688 216 FKCTRNRGFVMFTATK 231 (235)
Q Consensus 216 ~~~~~~~~~~~~~~~k 231 (235)
+++...+...++.+++
T Consensus 316 ~~~~~~~~~~vie~r~ 331 (332)
T 3i53_A 316 RAAHPISYVSIVEMTA 331 (332)
T ss_dssp EEEEECSSSEEEEEEE
T ss_pred EEEEECCCcEEEEEee
Confidence 9887665555555553
No 42
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.89 E-value=1.8e-22 Score=150.26 Aligned_cols=156 Identities=13% Similarity=0.124 Sum_probs=116.5
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCC---------CCCCCee
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN---------FPKENFL 117 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~---------~~~~~~~ 117 (235)
+..+..++..+...++.+|||+|||+|..+..+++++. +|+|+|+|+.|++.|+++...... ....+++
T Consensus 8 ~~~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 8 NKDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp THHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred CHHHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 44444445555555678999999999999999999875 999999999999999987642100 0034799
Q ss_pred EEecccccCCCCC-CceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCC
Q 026688 118 LVRADISRLPFAS-SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISG 194 (235)
Q Consensus 118 ~~~~d~~~~~~~~-~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (235)
+.++|+.+++++. ++||+|++..+++|++.. .++++++.++|||||.+++........ ...+
T Consensus 86 ~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~---------------~~~~ 150 (203)
T 1pjz_A 86 IWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA---------------LLEG 150 (203)
T ss_dssp EEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS---------------SSSS
T ss_pred EEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc---------------ccCC
Confidence 9999999987654 789999999999998754 468999999999999966555433210 0111
Q ss_pred ceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 195 SYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 195 ~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
....++.+++.+++.+ ||++.....
T Consensus 151 ~~~~~~~~el~~~~~~-gf~i~~~~~ 175 (203)
T 1pjz_A 151 PPFSVPQTWLHRVMSG-NWEVTKVGG 175 (203)
T ss_dssp CCCCCCHHHHHHTSCS-SEEEEEEEE
T ss_pred CCCCCCHHHHHHHhcC-CcEEEEecc
Confidence 2223689999999998 998766653
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.89 E-value=1.2e-22 Score=147.04 Aligned_cols=149 Identities=13% Similarity=0.149 Sum_probs=121.6
Q ss_pred hhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCcee
Q 026688 55 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 134 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 134 (235)
+.+...++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++ ..++++...| .+++.++||
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~D 77 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSVD 77 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCEE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCceE
Confidence 334445578999999999999999999874 999999999999999987 2378899998 456678999
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCc
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 214 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 214 (235)
+|++..+++|++++..+++++.++|+|||.+++.++........ ......++.+++.++++ ||+
T Consensus 78 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~--Gf~ 141 (170)
T 3i9f_A 78 FILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIG--------------PPLSIRMDEKDYMGWFS--NFV 141 (170)
T ss_dssp EEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS--------------SCGGGCCCHHHHHHHTT--TEE
T ss_pred EEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccccccC--------------chHhhhcCHHHHHHHHh--CcE
Confidence 99999999999999999999999999999999998876432111 12234589999999999 999
Q ss_pred eeEEEeeC-cEEEEEEecC
Q 026688 215 DFKCTRNR-GFVMFTATKP 232 (235)
Q Consensus 215 ~~~~~~~~-~~~~~~~~k~ 232 (235)
+++....+ ....++++++
T Consensus 142 ~~~~~~~~~~~~~l~~~~~ 160 (170)
T 3i9f_A 142 VEKRFNPTPYHFGLVLKRK 160 (170)
T ss_dssp EEEEECSSTTEEEEEEEEC
T ss_pred EEEccCCCCceEEEEEecC
Confidence 99887666 4555666554
No 44
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.89 E-value=2.3e-21 Score=148.09 Aligned_cols=163 Identities=23% Similarity=0.267 Sum_probs=123.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
+.+...+...++.+|||+|||+|..+..+++.+. .+++++|+|+.+++.++++... .++.+.+.|+.+.+++.
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCCCT
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccCCC
Confidence 4566667766789999999999999999998853 3899999999999999987542 36899999999888777
Q ss_pred CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccc-------------hhHHHH-----HHhHhhc
Q 026688 131 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI-------------PFSRLL-----RQNMMQI 192 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~-------------~~~~~~-----~~~~~~~ 192 (235)
++||+|++..+++|++++..+++++.++|+|||.+++.+++........ +....+ ...+...
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAK 185 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHH
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccC
Confidence 8999999999999999999999999999999999999886532100000 000000 0000011
Q ss_pred CCceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 193 SGSYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 193 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
..+...++.+++.++|+++||+++.+..
T Consensus 186 ~~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 186 GVVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp SCCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 2234457899999999999999888763
No 45
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.89 E-value=1.4e-21 Score=158.57 Aligned_cols=176 Identities=15% Similarity=0.110 Sum_probs=131.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
+.+.+.+...++.+|||+|||+|.++..+++.++..+++++|+ +.+++.+++++...+. ..++++..+|+.+ +++.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL--ADRVTVAEGDFFK-PLPV 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCSC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC-cCCC
Confidence 3455555555678999999999999999999988889999999 9999999999877653 3479999999976 3443
Q ss_pred CceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEe--ccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY--IVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 206 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (235)
.||+|++..++||++++. .+++++.++|+|||.+++.+. ..... ..+....+.............++.++|.+
T Consensus 248 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (374)
T 1qzz_A 248 -TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDG--ADRFFSTLLDLRMLTFMGGRVRTRDEVVD 324 (374)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---------HHHHHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCC--CCcchhhhcchHHHHhCCCcCCCHHHHHH
Confidence 499999999999998875 899999999999999999887 43211 11111111111111111245689999999
Q ss_pred HHHHcCCceeEEEeeCc-E-----EEEEEecCC
Q 026688 207 LCRACGLVDFKCTRNRG-F-----VMFTATKPS 233 (235)
Q Consensus 207 ~l~~~Gf~~~~~~~~~~-~-----~~~~~~k~~ 233 (235)
+++++||+++++...+. . .++.++|++
T Consensus 325 ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 325 LAGSAGLALASERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp HHHTTTEEEEEEEEECCSSCSSCEEEEEEEECC
T ss_pred HHHHCCCceEEEEECCCCcccCCcEEEEEEECc
Confidence 99999999988876553 3 677777764
No 46
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.89 E-value=1.4e-22 Score=156.78 Aligned_cols=165 Identities=16% Similarity=0.254 Sum_probs=118.3
Q ss_pred CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCC-C------------------------
Q 026688 58 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF-P------------------------ 112 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~------------------------ 112 (235)
...++.+|||||||+|.++..++..+. .+|+|+|+|+.+++.|++++...... .
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 344578999999999988877766652 37999999999999999876543100 0
Q ss_pred -CCCee-EEecccccC-CC---CCCceeEEEeccccccc-C---ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhH
Q 026688 113 -KENFL-LVRADISRL-PF---ASSSIDAVHAGAAIHCW-S---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 182 (235)
Q Consensus 113 -~~~~~-~~~~d~~~~-~~---~~~~~D~i~~~~~l~~~-~---~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~ 182 (235)
..++. +..+|+.+. |+ ..++||+|+++.++||+ + +...+++++.++|||||.+++...........
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~---- 206 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMV---- 206 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEE----
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCcccee----
Confidence 00233 888998773 32 24689999999999986 3 33588999999999999999997654321000
Q ss_pred HHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEEee-----------CcEEEEEEecCCC
Q 026688 183 RLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN-----------RGFVMFTATKPSQ 234 (235)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-----------~~~~~~~~~k~~~ 234 (235)
.........++.+++.++|+++||+++..... +...+++|+|++.
T Consensus 207 -------g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 262 (263)
T 2a14_A 207 -------GKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKPG 262 (263)
T ss_dssp -------TTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC-
T ss_pred -------CCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecCC
Confidence 00001123579999999999999998887653 2667889998763
No 47
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.89 E-value=7.9e-22 Score=150.56 Aligned_cols=155 Identities=15% Similarity=0.157 Sum_probs=122.7
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 47 EKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 47 ~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
....+.+...+. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ +++...|+.+
T Consensus 26 ~~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~ 92 (240)
T 3dli_A 26 ELVKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEGK-----------FNVVKSDAIE 92 (240)
T ss_dssp HHHHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHTT-----------SEEECSCHHH
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHhh-----------cceeeccHHH
Confidence 344455555544 23468999999999999999999865 899999999999998763 6788889877
Q ss_pred C--CCCCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCH
Q 026688 126 L--PFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 201 (235)
Q Consensus 126 ~--~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (235)
. +++.++||+|++..+++|++++ ..+++++.++|+|||.+++.+++.... . .+.. +.....+...++.
T Consensus 93 ~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~----~~~~-~~~~~~~~~~~~~ 164 (240)
T 3dli_A 93 YLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---Y----SLIN-FYIDPTHKKPVHP 164 (240)
T ss_dssp HHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---H----HHHH-HTTSTTCCSCCCH
T ss_pred HhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---H----HHHH-HhcCccccccCCH
Confidence 4 6777899999999999999966 799999999999999999998875321 1 1111 1123356678899
Q ss_pred HHHHHHHHHcCCceeEEEeeC
Q 026688 202 REIEDLCRACGLVDFKCTRNR 222 (235)
Q Consensus 202 ~~~~~~l~~~Gf~~~~~~~~~ 222 (235)
+++.++++++||+++......
T Consensus 165 ~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 165 ETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHHCCCeEEEEEEec
Confidence 999999999999988887554
No 48
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.89 E-value=6.1e-22 Score=155.47 Aligned_cols=153 Identities=11% Similarity=0.059 Sum_probs=110.6
Q ss_pred CCCCeEEEecCCCchHHHH----HHHcCCCceE--EEEeCCHHHHHHHHHHhhhcCCCCCCCe--eEEecccccCC----
Q 026688 60 VLGGNIIDASCGSGLFSRI----FAKSGLFSLV--VALDYSENMLKQCYEFVQQESNFPKENF--LLVRADISRLP---- 127 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~----l~~~~~~~~v--~~~D~s~~~~~~a~~~~~~~~~~~~~~~--~~~~~d~~~~~---- 127 (235)
.++.+|||||||+|.++.. ++..++.+.+ +++|+|+.|++.|++++..... ..++ .+...+..+.+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN--LENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS--CTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC--CCcceEEEEecchhhhhhhhc
Confidence 4567999999999976653 3444455544 9999999999999998865321 2344 44455555432
Q ss_pred --CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhc--CCceeecCHHH
Q 026688 128 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI--SGSYTFLSERE 203 (235)
Q Consensus 128 --~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 203 (235)
++.++||+|++..+++|++++.+++++++++|||||.+++.....+ ..+...+...+... ..+..+++.++
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGS-----SGWDKLWKKYGSRFPQDDLCQYITSDD 203 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTT-----SHHHHHHHHHGGGSCCCTTCCCCCHHH
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCC-----ccHHHHHHHHHHhccCCCcccCCCHHH
Confidence 4568899999999999999999999999999999999999876532 12222122221111 12456789999
Q ss_pred HHHHHHHcCCceeEEE
Q 026688 204 IEDLCRACGLVDFKCT 219 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~ 219 (235)
+.++|+++||+++...
T Consensus 204 ~~~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 204 LTQMLDNLGLKYECYD 219 (292)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHCCCceEEEE
Confidence 9999999999876643
No 49
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.89 E-value=1.8e-21 Score=144.21 Aligned_cols=147 Identities=19% Similarity=0.217 Sum_probs=117.7
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 131 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 131 (235)
.+.+.+...++.+|||+|||+|.++..+++.+. +++++|+|+.+++.+++++...+ ..++++...|+.+.++ .+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIEN---LDNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECCGGGCCC-CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCC---CCCcEEEEcchhhCCC-CC
Confidence 444555555678999999999999999998854 99999999999999999887654 3469999999998876 68
Q ss_pred ceeEEEecccccccC--ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHH
Q 026688 132 SIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 209 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~--~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (235)
+||+|++..+++|++ +...+++++.++|+|||.+++.+......... .......++.+++.++++
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~ 163 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC-------------TVGFPFAFKEGELRRYYE 163 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-------------CSCCSCCBCTTHHHHHTT
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC-------------CCCCCCccCHHHHHHHhc
Confidence 899999999999997 66799999999999999988877654321100 112334678999999998
Q ss_pred HcCCceeEEE
Q 026688 210 ACGLVDFKCT 219 (235)
Q Consensus 210 ~~Gf~~~~~~ 219 (235)
+ |+++...
T Consensus 164 ~--f~~~~~~ 171 (199)
T 2xvm_A 164 G--WERVKYN 171 (199)
T ss_dssp T--SEEEEEE
T ss_pred C--CeEEEec
Confidence 6 8877764
No 50
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.88 E-value=1e-21 Score=158.62 Aligned_cols=168 Identities=12% Similarity=0.124 Sum_probs=128.6
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC--CCCCCceeEEEe
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHA 138 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~i~~ 138 (235)
...+|||||||+|.++..+++.+|..+++++|+ +.+++.|++++...+. ..++++..+|+.+. |++ ++||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSG--SERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTT--GGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCc--ccceEEEEccccccCCCCC-CCcCEEEE
Confidence 468999999999999999999998889999999 9999999999876543 35799999999875 455 78999999
Q ss_pred cccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccch-hHHH-HHHhH-hhcCCceeecCHHHHHHHHHHcCC
Q 026688 139 GAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIP-FSRL-LRQNM-MQISGSYTFLSEREIEDLCRACGL 213 (235)
Q Consensus 139 ~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~-~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gf 213 (235)
..++|++++++ +++++++++|+|||.+++.+...+....... +... ....+ .......+.++.++|.++|+++||
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 99999998774 7899999999999999999876643221111 1011 11111 122334567899999999999999
Q ss_pred ceeEEEe-eC-cEEEEEEecC
Q 026688 214 VDFKCTR-NR-GFVMFTATKP 232 (235)
Q Consensus 214 ~~~~~~~-~~-~~~~~~~~k~ 232 (235)
+++++.. .+ ...++.+++.
T Consensus 335 ~~v~~~~~~g~~~svi~~~~~ 355 (363)
T 3dp7_A 335 EVEEIQDNIGLGHSILQCRLK 355 (363)
T ss_dssp EESCCCCCBTTTBEEEEEEEC
T ss_pred eEEEEEeCCCCCceEEEEeec
Confidence 9988863 33 3555655554
No 51
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.88 E-value=8e-22 Score=150.62 Aligned_cols=145 Identities=16% Similarity=0.155 Sum_probs=118.9
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.+++++...+ ..++.+.+.|+.+.+++.++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 47899999999999999998876 4599999999999999999886643 2368899999988877777899999999
Q ss_pred cccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEE
Q 026688 141 AIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC 218 (235)
Q Consensus 141 ~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 218 (235)
+++|++++. .+++++.++|+|||.+++.++..... .. + .........+.+++.++++++||+++..
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~-------~-~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG----VI-------L-DDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS----EE-------E-ETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc----ce-------e-cccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 999998865 89999999999999999988765420 00 0 0112334568999999999999999888
Q ss_pred Eee
Q 026688 219 TRN 221 (235)
Q Consensus 219 ~~~ 221 (235)
...
T Consensus 223 ~~~ 225 (241)
T 2ex4_A 223 ERQ 225 (241)
T ss_dssp EEC
T ss_pred eec
Confidence 643
No 52
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.88 E-value=1.6e-21 Score=157.48 Aligned_cols=176 Identities=13% Similarity=0.150 Sum_probs=132.2
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 131 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 131 (235)
.+.+.+...++.+|||+|||+|.++..+++.++..+++++|+ +.+++.+++++...+. ..++++..+|+.+ +++.
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL--SDRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC--TTTEEEEECCTTS-CCSS-
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC-CCCC-
Confidence 344555555678999999999999999999988889999999 9999999999877654 3479999999976 3333
Q ss_pred ceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEec-cCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 132 SIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYI-VDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
.||+|++..++||++++ .++++++.++|+|||.+++.+.. .... ....+ ................++.++|.+++
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~t~~e~~~ll 326 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHEN-SFNEQ-FTELDLRMLVFLGGALRTREKWDGLA 326 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGG-CCSHH-HHHHHHHHHHHHSCCCCBHHHHHHHH
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCC-CCcch-hhhccHHHhhhcCCcCCCHHHHHHHH
Confidence 49999999999999877 48999999999999999999876 3211 11111 11111111111124568999999999
Q ss_pred HHcCCceeEEEeeCc------EEEEEEecCCC
Q 026688 209 RACGLVDFKCTRNRG------FVMFTATKPSQ 234 (235)
Q Consensus 209 ~~~Gf~~~~~~~~~~------~~~~~~~k~~~ 234 (235)
+++||+++++...+. ..++.++|+..
T Consensus 327 ~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~~ 358 (360)
T 1tw3_A 327 ASAGLVVEEVRQLPSPTIPYDLSLLVLAPAAT 358 (360)
T ss_dssp HHTTEEEEEEEEEECSSSSCEEEEEEEEEC--
T ss_pred HHCCCeEEEEEeCCCCcccCccEEEEEEeCCC
Confidence 999999988875443 67888888754
No 53
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.88 E-value=1.6e-21 Score=155.92 Aligned_cols=175 Identities=15% Similarity=0.091 Sum_probs=132.8
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
....+.+.+...+ .+|||+|||+|..+..+++..|..+++++|+ +.+++.+++++...+. ..++++..+|+.+ ++
T Consensus 156 ~~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~-~~ 230 (334)
T 2ip2_A 156 AFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA--GERVSLVGGDMLQ-EV 230 (334)
T ss_dssp HHHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH--TTSEEEEESCTTT-CC
T ss_pred HHHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC--CCcEEEecCCCCC-CC
Confidence 3445555555555 8999999999999999999988889999999 9999999998765432 3479999999977 55
Q ss_pred CCCceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 206 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (235)
+ +.||+|++..++||+++.. ++++++.++|+|||.+++.+...+.... +..................++.++|.+
T Consensus 231 ~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~e~~~ 307 (334)
T 2ip2_A 231 P-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMSVLWDVHLFMACAGRHRTTEEVVD 307 (334)
T ss_dssp C-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC--CHHHHHHHHHHHHHHSCCCCBHHHHHH
T ss_pred C-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhHHhhhHhHhhCCCcCCCHHHHHH
Confidence 4 6799999999999998776 8999999999999999999876543211 221221111111111234578999999
Q ss_pred HHHHcCCceeEEEeeC-cEEEEEEec
Q 026688 207 LCRACGLVDFKCTRNR-GFVMFTATK 231 (235)
Q Consensus 207 ~l~~~Gf~~~~~~~~~-~~~~~~~~k 231 (235)
+++++||+++++...+ ...++.++|
T Consensus 308 ll~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 308 LLGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHHCCCceeEEEECCCCCEEEEEEe
Confidence 9999999998887654 456777765
No 54
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.88 E-value=2.1e-21 Score=151.78 Aligned_cols=171 Identities=13% Similarity=0.138 Sum_probs=128.0
Q ss_pred HHHHHHHHhhc-CCCCCCeEEEecCCCchHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 47 EKEFELMKGYL-KPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 47 ~~~~~~i~~~~-~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
......+.+.+ ...++.+|||+|||+|.++..+++..+. .+|+|+|+|+.+++.+++++...+ .++++.+.|+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~ 82 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP----YDSEFLEGDAT 82 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS----SEEEEEESCTT
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEcchh
Confidence 44455555544 4556899999999999999999998763 799999999999999999887643 37999999999
Q ss_pred cCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc-----CC--Ccccc-hh--HHHHHHhHh--hc
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV-----DG--PFNLI-PF--SRLLRQNMM--QI 192 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~-----~~--~~~~~-~~--~~~~~~~~~--~~ 192 (235)
+.+++ ++||+|++..+++|++++..+++++.++|+|||++++.++.. .. ..... .. ...+...+. ..
T Consensus 83 ~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (284)
T 3gu3_A 83 EIELN-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQ 161 (284)
T ss_dssp TCCCS-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHH
T ss_pred hcCcC-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhh
Confidence 88764 689999999999999999999999999999999999988761 10 00000 00 111111111 01
Q ss_pred CCceeecCHHHHHHHHHHcCCceeEEEeeC
Q 026688 193 SGSYTFLSEREIEDLCRACGLVDFKCTRNR 222 (235)
Q Consensus 193 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 222 (235)
.....+.+..++.++|+++||+.+......
T Consensus 162 ~~~~~~~~~~~l~~~l~~aGF~~v~~~~~~ 191 (284)
T 3gu3_A 162 RNGKDGNIGMKIPIYLSELGVKNIECRVSD 191 (284)
T ss_dssp HTCCCTTGGGTHHHHHHHTTCEEEEEEECC
T ss_pred hhcccccHHHHHHHHHHHcCCCeEEEEEcC
Confidence 122345567889999999999988775443
No 55
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.88 E-value=2e-21 Score=151.18 Aligned_cols=171 Identities=12% Similarity=0.101 Sum_probs=129.0
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHH------HHHHHHHHhhhcCCCCCCCeeEEec
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSEN------MLKQCYEFVQQESNFPKENFLLVRA 121 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~------~~~~a~~~~~~~~~~~~~~~~~~~~ 121 (235)
....+++.+...++.+|||||||+|.++..+++. ++..+|+|+|+|+. +++.+++++...+. ..++++...
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~--~~~v~~~~~ 108 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL--GDRLTVHFN 108 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT--GGGEEEECS
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC--CCceEEEEC
Confidence 3456666667777899999999999999999988 46679999999997 99999999876543 357999999
Q ss_pred c---cccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccc--hhHHHHHH-hHh-----
Q 026688 122 D---ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI--PFSRLLRQ-NMM----- 190 (235)
Q Consensus 122 d---~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~--~~~~~~~~-~~~----- 190 (235)
| ....+++.++||+|++..+++|++++..+++.+.++++|||.+++.++......... .....+.. .+.
T Consensus 109 d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (275)
T 3bkx_A 109 TNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPS 188 (275)
T ss_dssp CCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCC
T ss_pred ChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccc
Confidence 8 344566678999999999999999998888888888888999999998765321111 11111111 110
Q ss_pred hcCCceeecCHHHHHHHHHHcCCceeEEEee
Q 026688 191 QISGSYTFLSEREIEDLCRACGLVDFKCTRN 221 (235)
Q Consensus 191 ~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 221 (235)
.......+++.+++.++++++||+++.....
T Consensus 189 ~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 189 DVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp TTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 0123346789999999999999998776543
No 56
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.88 E-value=6.1e-22 Score=153.05 Aligned_cols=158 Identities=20% Similarity=0.206 Sum_probs=124.7
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++ .++++.+.|+.+
T Consensus 19 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~---------~~~~~~~~d~~~ 87 (261)
T 3ege_A 19 DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVH---------PQVEWFTGYAEN 87 (261)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCC---------TTEEEECCCTTS
T ss_pred cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhc---------cCCEEEECchhh
Confidence 45677788888877778999999999999999999854 5999999999999877653 278999999999
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccc--hhHHHHHHhHhhcCCceeecCHHH
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI--PFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
.+++.++||+|++..+++|++++..+++++.++|+ ||++++.++......... ........ ..+..+.+.++
T Consensus 88 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 161 (261)
T 3ege_A 88 LALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWE-----DALRFLPLDEQ 161 (261)
T ss_dssp CCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHH-----HHHTSCCHHHH
T ss_pred CCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhh-----hhhhhCCCHHH
Confidence 88888999999999999999999999999999999 999999888654321100 11111111 11234567788
Q ss_pred HHHHHHHcCCceeEEEee
Q 026688 204 IEDLCRACGLVDFKCTRN 221 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~~ 221 (235)
+. +|+++||.++.+...
T Consensus 162 ~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 162 IN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp HH-HHHHHHCSEEEEEEC
T ss_pred HH-HHHHcCCCceeEEEe
Confidence 99 999999998877654
No 57
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.88 E-value=7.6e-22 Score=152.66 Aligned_cols=165 Identities=15% Similarity=0.267 Sum_probs=123.3
Q ss_pred CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCC--------------C-----------
Q 026688 58 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF--------------P----------- 112 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~--------------~----------- 112 (235)
...++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.+++++...+.. .
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 334578999999999999999888765 58999999999999999887542100 0
Q ss_pred -CCCe-eEEecccccCC-CCC---CceeEEEeccccc----ccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhH
Q 026688 113 -KENF-LLVRADISRLP-FAS---SSIDAVHAGAAIH----CWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 182 (235)
Q Consensus 113 -~~~~-~~~~~d~~~~~-~~~---~~~D~i~~~~~l~----~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~ 182 (235)
..++ .+...|+.+.+ ++. ++||+|++..+++ +.+++..+++++.++|+|||.+++.+.........
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~---- 207 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMI---- 207 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEE----
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEc----
Confidence 0026 89999998753 244 7899999999999 55566799999999999999999988654321000
Q ss_pred HHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEEeeC-----------cEEEEEEecCCC
Q 026688 183 RLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNR-----------GFVMFTATKPSQ 234 (235)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-----------~~~~~~~~k~~~ 234 (235)
.........++.+++.++|+++||+++...... ...+++++|++.
T Consensus 208 -------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 263 (265)
T 2i62_A 208 -------GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGR 263 (265)
T ss_dssp -------TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC-
T ss_pred -------CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccccc
Confidence 001112345788999999999999998887544 467888999865
No 58
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.88 E-value=4.6e-21 Score=146.41 Aligned_cols=176 Identities=17% Similarity=0.184 Sum_probs=128.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
....+.+...+.. +.+|||+|||+|.++..+++. .+++++|+|+.+++.|+++....+ .++++.+.|+.+.
T Consensus 21 ~~~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~ 91 (243)
T 3d2l_A 21 PEWVAWVLEQVEP--GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN----RHVDFWVQDMREL 91 (243)
T ss_dssp HHHHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCGGGC
T ss_pred HHHHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC----CceEEEEcChhhc
Confidence 3455666666654 589999999999999999887 499999999999999999887642 4689999999887
Q ss_pred CCCCCceeEEEecc-cccccCC---hHHHHHHHHHhccCCcEEEEEEeccCCCccc---ch-----------hHHHH---
Q 026688 127 PFASSSIDAVHAGA-AIHCWSS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IP-----------FSRLL--- 185 (235)
Q Consensus 127 ~~~~~~~D~i~~~~-~l~~~~~---~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~---~~-----------~~~~~--- 185 (235)
+++ ++||+|++.. +++|+.+ ...+++++.++|+|||.+++..++....... .. +....
T Consensus 92 ~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (243)
T 3d2l_A 92 ELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEE 170 (243)
T ss_dssp CCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSS
T ss_pred CCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCcc
Confidence 765 7899999986 8999844 4588999999999999999876543210000 00 00000
Q ss_pred HH-------hHh--h--------cCCceeecCHHHHHHHHHHcCCceeEEEe---------eCcEEEEEEecC
Q 026688 186 RQ-------NMM--Q--------ISGSYTFLSEREIEDLCRACGLVDFKCTR---------NRGFVMFTATKP 232 (235)
Q Consensus 186 ~~-------~~~--~--------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~---------~~~~~~~~~~k~ 232 (235)
.. .+. . ...+.+.++.+++.++|+++||+++.+.. .....+++++|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K~ 243 (243)
T 3d2l_A 171 PLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEKI 243 (243)
T ss_dssp TTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEEC
T ss_pred ccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEeC
Confidence 00 000 0 01123578999999999999999988863 235678889885
No 59
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.88 E-value=1.3e-21 Score=154.08 Aligned_cols=173 Identities=16% Similarity=0.175 Sum_probs=125.4
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+... +.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++...+.....++++.++|+.+
T Consensus 68 ~~~~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 68 GTSEAREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA 144 (299)
T ss_dssp CHHHHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB
T ss_pred ccHHHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc
Confidence 456667777777654 45999999999999999999864 899999999999999999876421001479999999999
Q ss_pred CCCCCCceeEEEec-ccccccCC--hHHHHHHHHHhccCCcEEEEEEeccCCCccc-----chhHHHHHH---hHh----
Q 026688 126 LPFASSSIDAVHAG-AAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNL-----IPFSRLLRQ---NMM---- 190 (235)
Q Consensus 126 ~~~~~~~~D~i~~~-~~l~~~~~--~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~-----~~~~~~~~~---~~~---- 190 (235)
+++ .++||+|++. .++++++. ...+++++.++|+|||.|++.+++....... ..+...-.. .+.
T Consensus 145 ~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 223 (299)
T 3g2m_A 145 FAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLP 223 (299)
T ss_dssp CCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEE
T ss_pred CCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEec
Confidence 876 6889999976 55665553 3689999999999999999998876421000 000000000 000
Q ss_pred --------------------hcCCceeecCHHHHHHHHHHcCCceeEEEeeC
Q 026688 191 --------------------QISGSYTFLSEREIEDLCRACGLVDFKCTRNR 222 (235)
Q Consensus 191 --------------------~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 222 (235)
....+.++++++++.++|+++||+++.+....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 224 AEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 01123557899999999999999999887543
No 60
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.88 E-value=7.5e-21 Score=143.16 Aligned_cols=137 Identities=21% Similarity=0.333 Sum_probs=111.6
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEeccc
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 141 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 141 (235)
+.+|||+|||+|.++..+++. +++|+++.+++.++++ ++.+.+.|+.+.+++.++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 789999999999999988653 9999999999999874 477899999888877789999999999
Q ss_pred ccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhH--hhcCCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 142 IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM--MQISGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 142 l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
++|++++..+++++.++|+|||.+++.++.... ++...+.... .....+..+++.+++.++|+++||+++.+.
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDRES-----FLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSS-----HHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCCcc-----HHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 999999999999999999999999999886532 1111111110 112234567899999999999999988776
No 61
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.87 E-value=2.2e-21 Score=157.73 Aligned_cols=156 Identities=20% Similarity=0.218 Sum_probs=121.4
Q ss_pred CCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhc-----CCCCCCCeeEEecccccC------C
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQE-----SNFPKENFLLVRADISRL------P 127 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~~~~~d~~~~------~ 127 (235)
.++.+|||+|||+|..+..+++.. +..+|+|+|+|+.+++.+++++... +.....++++..+|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 457899999999999999998874 6679999999999999999887543 201135899999999886 7
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHH
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 207 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (235)
++.++||+|+++.+++|++++..+++++.++|+|||.+++.++...... ..........+ .......++.+++.++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~l 237 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRL--SEAAQQDPILY--GECLGGALYLEDFRRL 237 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCC--CHHHHHCHHHH--HTTCTTCCBHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccccc--CHhHhhhHHHh--hcccccCCCHHHHHHH
Confidence 7788999999999999999999999999999999999999987664311 11111111111 1122345788999999
Q ss_pred HHHcCCceeEEE
Q 026688 208 CRACGLVDFKCT 219 (235)
Q Consensus 208 l~~~Gf~~~~~~ 219 (235)
|+++||+++++.
T Consensus 238 l~~aGF~~v~~~ 249 (383)
T 4fsd_A 238 VAEAGFRDVRLV 249 (383)
T ss_dssp HHHTTCCCEEEE
T ss_pred HHHCCCceEEEE
Confidence 999999877654
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.87 E-value=6e-21 Score=151.55 Aligned_cols=166 Identities=12% Similarity=0.132 Sum_probs=126.6
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+.+.+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++....+. ..++++...|+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDT--NRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCC--SSCEEEEESCGGGCC-
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECChHHCC-
Confidence 44566777777778999999999999999999873 24999999999999999999877654 346999999998764
Q ss_pred CCCceeEEEeccccccc--CChHHHHHHHHHhccCCcEEEEEEeccCCCcccc----hh---HHHHHHhHh-hcCCceee
Q 026688 129 ASSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI----PF---SRLLRQNMM-QISGSYTF 198 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~--~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~----~~---~~~~~~~~~-~~~~~~~~ 198 (235)
++||+|++..+++|+ +++..+++++.++|+|||.+++.++......... +. .......+. ........
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRL 231 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcC
Confidence 789999999999999 5668999999999999999999998764311100 00 000111111 11122355
Q ss_pred cCHHHHHHHHHHcCCceeEEEe
Q 026688 199 LSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 199 ~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
.+.+++.++++++||+++....
T Consensus 232 ~s~~~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 232 PSTEMMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp CCHHHHHHHHHHTTCBCCCCEE
T ss_pred CCHHHHHHHHHhCCCEEEEEEe
Confidence 7999999999999999877654
No 63
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.87 E-value=5.9e-22 Score=149.71 Aligned_cols=169 Identities=15% Similarity=0.143 Sum_probs=123.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC---C
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---P 127 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---~ 127 (235)
..+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ .++.+...|+.+. +
T Consensus 42 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~ 110 (227)
T 3e8s_A 42 QAILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAK 110 (227)
T ss_dssp HHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTC
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhcccc
Confidence 4455555545579999999999999999998854 999999999999999885 2466788888765 4
Q ss_pred CC-CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHH-hHhh-----cCCceeecC
Q 026688 128 FA-SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ-NMMQ-----ISGSYTFLS 200 (235)
Q Consensus 128 ~~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~ 200 (235)
.. ..+||+|++..+++ ..++..+++++.++|+|||.+++.++........ .+...+.. .+.. ......+++
T Consensus 111 ~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (227)
T 3e8s_A 111 VPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADG-DYQDGWREESFAGFAGDWQPMPWYFRT 188 (227)
T ss_dssp SCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT-CCSCEEEEECCTTSSSCCCCEEEEECC
T ss_pred cccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCcc-ccccccchhhhhccccCcccceEEEec
Confidence 33 34599999999999 7888999999999999999999998876432110 00000000 0000 112345679
Q ss_pred HHHHHHHHHHcCCceeEEEee-------CcEEEEEEecC
Q 026688 201 EREIEDLCRACGLVDFKCTRN-------RGFVMFTATKP 232 (235)
Q Consensus 201 ~~~~~~~l~~~Gf~~~~~~~~-------~~~~~~~~~k~ 232 (235)
.+++.++|+++||+++.+... +...+++++||
T Consensus 189 ~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 189 LASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp HHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 999999999999999887641 23567777765
No 64
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.87 E-value=2.7e-21 Score=147.30 Aligned_cols=169 Identities=20% Similarity=0.230 Sum_probs=123.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
+.+.... .++.+|||+|||+|.++..+++.++ +++++|+|+.+++.++++. .++++.+.|+.+.++ .
T Consensus 32 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~ 98 (239)
T 3bxo_A 32 DLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL--------PDATLHQGDMRDFRL-G 98 (239)
T ss_dssp HHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTCCC-S
T ss_pred HHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHccc-C
Confidence 3444434 3478999999999999999999876 9999999999999999863 368899999988776 5
Q ss_pred CceeEEEec-ccccccCCh---HHHHHHHHHhccCCcEEEEEEeccCCCcccchh-----------H----------HHH
Q 026688 131 SSIDAVHAG-AAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF-----------S----------RLL 185 (235)
Q Consensus 131 ~~~D~i~~~-~~l~~~~~~---~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~-----------~----------~~~ 185 (235)
++||+|+|. .+++|+.++ ..+++++.++|+|||.+++.++........... . ...
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNAT 178 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEE
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEE
Confidence 789999964 589998654 589999999999999999987654321100000 0 000
Q ss_pred --H-HhH-hh---------cCCceeecCHHHHHHHHHHcCCceeEEEe-eCcEEEEEEecC
Q 026688 186 --R-QNM-MQ---------ISGSYTFLSEREIEDLCRACGLVDFKCTR-NRGFVMFTATKP 232 (235)
Q Consensus 186 --~-~~~-~~---------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-~~~~~~~~~~k~ 232 (235)
. ..+ .. ...+.++++++++.++|+++||++..+.. .+...+++++||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 239 (239)
T 3bxo_A 179 RMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVPA 239 (239)
T ss_dssp EEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred EEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEecC
Confidence 0 000 00 00124678999999999999998776654 346778888886
No 65
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.4e-21 Score=150.55 Aligned_cols=161 Identities=15% Similarity=0.169 Sum_probs=120.9
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhc-CCCCCCCeeEEeccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADI 123 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~ 123 (235)
+....+.+..... .++.+|||+|||+|..+..+++.. +..+|+|+|+|+.+++.|++++... +. ..++++.++|+
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~v~~~~~d~ 98 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDT--YKNVSFKISSS 98 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-C--CTTEEEEECCT
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCC--CCceEEEEcCH
Confidence 5666777777655 357899999999999999999764 6679999999999999999998765 22 45899999999
Q ss_pred ccCCCCC------CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCC---CcccchhHHHHHHhHhhcCC
Q 026688 124 SRLPFAS------SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDG---PFNLIPFSRLLRQNMMQISG 194 (235)
Q Consensus 124 ~~~~~~~------~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 194 (235)
.+++++. ++||+|++..+++|+ ++..+++++.++|+|||.+++....... ..........+.. ....
T Consensus 99 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 174 (299)
T 3g5t_A 99 DDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPY---GKQG 174 (299)
T ss_dssp TCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHH---CTTT
T ss_pred HhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhcc---Cccc
Confidence 9887666 799999999999999 9999999999999999999995544321 1112222222211 1001
Q ss_pred ceeec---CHHHHHHHHHHcCC
Q 026688 195 SYTFL---SEREIEDLCRACGL 213 (235)
Q Consensus 195 ~~~~~---~~~~~~~~l~~~Gf 213 (235)
...++ ..+.+.+.+++.||
T Consensus 175 ~~~~w~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 175 LGPYWEQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp TGGGSCTTHHHHHHTTTTTCCC
T ss_pred ccchhhchhhHHHHHhhhccCC
Confidence 11222 35667889999999
No 66
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.87 E-value=5e-21 Score=146.73 Aligned_cols=153 Identities=17% Similarity=0.155 Sum_probs=114.0
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhh---------cCC-----CCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---------ESN-----FPKE 114 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~---------~~~-----~~~~ 114 (235)
+.+.+.......++.+|||+|||+|..+..|++.+. +|+|+|+|+.+++.|+++... .+. ....
T Consensus 56 l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 56 LKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred HHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 334444433334578999999999999999999876 999999999999999876531 000 0035
Q ss_pred CeeEEecccccCCCCC-CceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhh
Q 026688 115 NFLLVRADISRLPFAS-SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ 191 (235)
Q Consensus 115 ~~~~~~~d~~~~~~~~-~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (235)
++++.++|+.+++++. ++||+|++..++++++.. ..+++++.++|+|||.+++.+.......
T Consensus 134 ~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~--------------- 198 (252)
T 2gb4_A 134 SISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK--------------- 198 (252)
T ss_dssp SEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS---------------
T ss_pred ceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc---------------
Confidence 7999999999887653 789999999999998754 4789999999999999986655432100
Q ss_pred cCCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 192 ISGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 192 ~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
..+....++++++.+++.. +|+++...
T Consensus 199 ~~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 199 HAGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp CCCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 1112223789999999987 59876665
No 67
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.87 E-value=4.9e-21 Score=144.80 Aligned_cols=174 Identities=19% Similarity=0.243 Sum_probs=123.9
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+.+.+.. +.+|||+|||+|.++..+++.++ +++++|+|+.+++.++++....+ .++++.+.|+.+.++
T Consensus 28 ~~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~ 99 (227)
T 1ve3_A 28 LEPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE----SNVEFIVGDARKLSF 99 (227)
T ss_dssp HHHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCTTSCCS
T ss_pred HHHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC----CCceEEECchhcCCC
Confidence 34455555544 78999999999999999999987 99999999999999999887642 478999999988777
Q ss_pred CCCceeEEEeccc--ccccCChHHHHHHHHHhccCCcEEEEEEeccCCCccc--c--hhHHHHHHhH--hhcC-------
Q 026688 129 ASSSIDAVHAGAA--IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL--I--PFSRLLRQNM--MQIS------- 193 (235)
Q Consensus 129 ~~~~~D~i~~~~~--l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~--~--~~~~~~~~~~--~~~~------- 193 (235)
+.++||+|++..+ +++..++..+++++.++|+|||.+++.+++....... . .....++... ....
T Consensus 100 ~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (227)
T 1ve3_A 100 EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIE 179 (227)
T ss_dssp CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEE
T ss_pred CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEE
Confidence 7789999999998 5555567799999999999999999988763210000 0 0000000000 0000
Q ss_pred ---------CceeecCHHHHHHHHHHcCCceeEEEeeCcEEEEEEec
Q 026688 194 ---------GSYTFLSEREIEDLCRACGLVDFKCTRNRGFVMFTATK 231 (235)
Q Consensus 194 ---------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~k 231 (235)
.....+. .++.++|+++||..+++...+...+++..+
T Consensus 180 ~~~~~~~~~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~ 225 (227)
T 1ve3_A 180 FKSEQDSFRVRFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYN 225 (227)
T ss_dssp C-----CCEEEEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEE
T ss_pred eccchhhheeehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeC
Confidence 0012222 478999999999999998877554444433
No 68
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.87 E-value=3.4e-22 Score=164.37 Aligned_cols=171 Identities=12% Similarity=0.127 Sum_probs=126.0
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
....+.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++-.. .....+...+...+
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~~~~-----~~~~~~~~~~~~~l 165 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREKGIR-----VRTDFFEKATADDV 165 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTTTCC-----EECSCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHcCCC-----cceeeechhhHhhc
Confidence 34556667777766788999999999999999999866 999999999999999875110 11111223444445
Q ss_pred CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHH
Q 026688 127 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 206 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (235)
+++.++||+|++..+++|++++..+++++.++|+|||.+++..+.... .............+..+++.+++.+
T Consensus 166 ~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~l~~ 238 (416)
T 4e2x_A 166 RRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD-------IVAKTSFDQIFDEHFFLFSATSVQG 238 (416)
T ss_dssp HHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH-------HHHHTCGGGCSTTCCEECCHHHHHH
T ss_pred ccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH-------hhhhcchhhhhhhhhhcCCHHHHHH
Confidence 556789999999999999999999999999999999999998775321 0000111112245677899999999
Q ss_pred HHHHcCCceeEEEeeC----cEEEEEEec
Q 026688 207 LCRACGLVDFKCTRNR----GFVMFTATK 231 (235)
Q Consensus 207 ~l~~~Gf~~~~~~~~~----~~~~~~~~k 231 (235)
+++++||+++.+...+ ...++.+++
T Consensus 239 ll~~aGf~~~~~~~~~~~~g~l~~~~~~~ 267 (416)
T 4e2x_A 239 MAQRCGFELVDVQRLPVHGGEVRYTLARQ 267 (416)
T ss_dssp HHHHTTEEEEEEEEECGGGSEEEEEEEET
T ss_pred HHHHcCCEEEEEEEccCCCCEEEEEEEeC
Confidence 9999999998887633 344444444
No 69
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.87 E-value=2.4e-21 Score=148.80 Aligned_cols=114 Identities=28% Similarity=0.360 Sum_probs=100.2
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
+.++.+.+.+.... ..+|||||||+|..+..+++.+. +|+|+|+|+.|++.|++ ..++.+.++|+++
T Consensus 26 p~~l~~~l~~~~~~--~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~ 92 (257)
T 4hg2_A 26 PRALFRWLGEVAPA--RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAED 92 (257)
T ss_dssp CHHHHHHHHHHSSC--SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTC
T ss_pred HHHHHHHHHHhcCC--CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhh
Confidence 57778888877664 57999999999999999999876 99999999999987754 4579999999999
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
+++++++||+|++..++||+ ++.++++++.|+|||||.|++......
T Consensus 93 ~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 93 TGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999999999999776 578899999999999999999887654
No 70
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.87 E-value=3.9e-21 Score=154.43 Aligned_cols=169 Identities=15% Similarity=0.084 Sum_probs=123.6
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 131 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 131 (235)
.+.+.+...+..+|||||||+|..+..+++..|..+++++|+ +.++. +++....+. ..++++..+|+. .+.+
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~--~~~v~~~~~d~~-~~~p-- 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDV--AGRWKVVEGDFL-REVP-- 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGG--TTSEEEEECCTT-TCCC--
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCC--CCCeEEEecCCC-CCCC--
Confidence 455555656678999999999999999999999889999999 44554 332222222 357999999997 3444
Q ss_pred ceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHH
Q 026688 132 SIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 209 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (235)
+||+|++..++||++++ .+++++++++|+|||++++.+...+... .+..................++.++|.++++
T Consensus 247 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~--~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~ 324 (348)
T 3lst_A 247 HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGN--DAHQSKEMDFMMLAARTGQERTAAELEPLFT 324 (348)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSS--SCCHHHHHHHHHHHTTSCCCCBHHHHHHHHH
T ss_pred CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCC--CcchhhhcChhhhhcCCCcCCCHHHHHHHHH
Confidence 89999999999999988 5999999999999999999987664421 1111222211111123455689999999999
Q ss_pred HcCCceeEEEeeC-cEEEEEEe
Q 026688 210 ACGLVDFKCTRNR-GFVMFTAT 230 (235)
Q Consensus 210 ~~Gf~~~~~~~~~-~~~~~~~~ 230 (235)
++||+++++...+ ...++.++
T Consensus 325 ~aGf~~~~~~~~~~~~~vie~~ 346 (348)
T 3lst_A 325 AAGLRLDRVVGTSSVMSIAVGV 346 (348)
T ss_dssp HTTEEEEEEEECSSSCEEEEEE
T ss_pred HCCCceEEEEECCCCcEEEEEE
Confidence 9999998887644 34455554
No 71
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.87 E-value=2.2e-20 Score=151.02 Aligned_cols=168 Identities=14% Similarity=0.118 Sum_probs=125.6
Q ss_pred HHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 52 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 52 ~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
.+.+.+. ..+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++ ..++++..+|+.+ +++.
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p~ 261 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVPK 261 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCCC
Confidence 3444444 44568999999999999999999999889999999 888877653 3479999999986 6554
Q ss_pred CceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchh--HHHHHHhHh-hcCCceeecCHHHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF--SRLLRQNMM-QISGSYTFLSEREIE 205 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~ 205 (235)
. |+|++..++||+++.. +++++++++|+|||++++.+...+........ ......... ........++.++|+
T Consensus 262 ~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~ 339 (368)
T 3reo_A 262 G--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQ 339 (368)
T ss_dssp C--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHH
T ss_pred C--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHH
Confidence 3 9999999999998764 78999999999999999998876432211111 111111111 112245567999999
Q ss_pred HHHHHcCCceeEEEee-CcEEEEEEecC
Q 026688 206 DLCRACGLVDFKCTRN-RGFVMFTATKP 232 (235)
Q Consensus 206 ~~l~~~Gf~~~~~~~~-~~~~~~~~~k~ 232 (235)
++++++||+++++... +...++.+.|+
T Consensus 340 ~ll~~AGF~~v~~~~~~~~~~vie~~k~ 367 (368)
T 3reo_A 340 ALAMASGFRGFKVASCAFNTYVMEFLKT 367 (368)
T ss_dssp HHHHHTTCCEEEEEEEETTEEEEEEECC
T ss_pred HHHHHCCCeeeEEEEeCCCcEEEEEEeC
Confidence 9999999999888654 46667777765
No 72
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.86 E-value=1.5e-20 Score=147.50 Aligned_cols=125 Identities=21% Similarity=0.291 Sum_probs=103.8
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCC-CCCCeeEEecccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF-PKENFLLVRADIS 124 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-~~~~~~~~~~d~~ 124 (235)
.....+.+.+.+...++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|+++....... ...++.+..+|+.
T Consensus 42 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 42 TAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 455566677766656678999999999999999999876 9999999999999999876432210 0236788999998
Q ss_pred cCC---CCCCceeEEEec-ccccccCC-------hHHHHHHHHHhccCCcEEEEEEecc
Q 026688 125 RLP---FASSSIDAVHAG-AAIHCWSS-------PSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 125 ~~~---~~~~~~D~i~~~-~~l~~~~~-------~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.++ ++.++||+|++. .+++|+++ ...+++++.++|+|||++++..++.
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 876 677899999998 89999999 7899999999999999999988764
No 73
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.86 E-value=1.6e-19 Score=134.44 Aligned_cols=137 Identities=15% Similarity=0.040 Sum_probs=115.0
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
..+....+++.+...++.+|||+|||+|.++..+++.++..+++++|+|+.+++.+++++...+ ..++++...|+.+
T Consensus 25 ~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~ 101 (204)
T 3e05_A 25 KQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV---ARNVTLVEAFAPE 101 (204)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT---CTTEEEEECCTTT
T ss_pred hHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC---CCcEEEEeCChhh
Confidence 5666677888888888899999999999999999999877899999999999999999987765 3579999999966
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHH
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 205 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (235)
.....+.||+|++...++ +...+++++.++|+|||.+++..... -+.+++.
T Consensus 102 ~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~--------------------------~~~~~~~ 152 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL--------------------------DTLTKAV 152 (204)
T ss_dssp TCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH--------------------------HHHHHHH
T ss_pred hhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc--------------------------ccHHHHH
Confidence 433347799999988775 67799999999999999999976543 1346778
Q ss_pred HHHHHcCCc
Q 026688 206 DLCRACGLV 214 (235)
Q Consensus 206 ~~l~~~Gf~ 214 (235)
+.++++||.
T Consensus 153 ~~l~~~g~~ 161 (204)
T 3e05_A 153 EFLEDHGYM 161 (204)
T ss_dssp HHHHHTTCE
T ss_pred HHHHHCCCc
Confidence 889999983
No 74
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.86 E-value=2.2e-21 Score=144.21 Aligned_cols=150 Identities=15% Similarity=0.120 Sum_probs=115.2
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
.+..++..+.. + +|||+|||+|.++..+++.+. +++++|+|+.+++.++++....+ .++.+.+.|+.+.++
T Consensus 20 ~l~~~~~~~~~--~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~ 90 (202)
T 2kw5_A 20 FLVSVANQIPQ--G-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDI 90 (202)
T ss_dssp SHHHHHHHSCS--S-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSC
T ss_pred HHHHHHHhCCC--C-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCC
Confidence 34444444443 5 999999999999999998754 99999999999999999887653 278999999988887
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
+.++||+|++.....+..+...+++++.++|+|||.+++.++....... .......+..+++++++.+++
T Consensus 91 ~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~l 160 (202)
T 2kw5_A 91 VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY----------NTGGPKDLDLLPKLETLQSEL 160 (202)
T ss_dssp CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG----------TSCCSSSGGGCCCHHHHHHHC
T ss_pred CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC----------CCCCCCcceeecCHHHHHHHh
Confidence 7789999998543222234578999999999999999999987643210 001112335678999999999
Q ss_pred HHcCCceeEEE
Q 026688 209 RACGLVDFKCT 219 (235)
Q Consensus 209 ~~~Gf~~~~~~ 219 (235)
+ ||+++...
T Consensus 161 ~--Gf~v~~~~ 169 (202)
T 2kw5_A 161 P--SLNWLIAN 169 (202)
T ss_dssp S--SSCEEEEE
T ss_pred c--CceEEEEE
Confidence 9 99987765
No 75
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.86 E-value=1.7e-21 Score=152.83 Aligned_cols=154 Identities=16% Similarity=0.158 Sum_probs=110.6
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCC-----------------------------
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF----------------------------- 111 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~----------------------------- 111 (235)
++.+|||||||+|..+..+++..+..+|+|+|+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999976779999999999999999876543210
Q ss_pred --------------------------CCCCeeEEecccccCC-----CCCCceeEEEecccccccC------ChHHHHHH
Q 026688 112 --------------------------PKENFLLVRADISRLP-----FASSSIDAVHAGAAIHCWS------SPSTGVAE 154 (235)
Q Consensus 112 --------------------------~~~~~~~~~~d~~~~~-----~~~~~~D~i~~~~~l~~~~------~~~~~l~~ 154 (235)
-..++++.++|+...+ +..++||+|+|..+++|+. +..+++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0147999999997643 4568999999999997763 55689999
Q ss_pred HHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHH--cCCceeEEE
Q 026688 155 ISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA--CGLVDFKCT 219 (235)
Q Consensus 155 ~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gf~~~~~~ 219 (235)
+.++|+|||.|++.................+...+. ...+.++++..+|.+ +||+.+++.
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~-----~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYY-----RIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHH-----HCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhh-----cEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 999999999999975432211000011111111111 123458999999998 999876664
No 76
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.86 E-value=2.1e-20 Score=151.52 Aligned_cols=166 Identities=17% Similarity=0.152 Sum_probs=123.3
Q ss_pred HHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 52 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 52 ~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
.+.+.+. ..+..+|||+|||+|.++..++++++..+++++|+ +.+++.+++ ..++++..+|+.+ +++.
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCCC
Confidence 3444443 44578999999999999999999998889999999 888877654 2469999999987 5553
Q ss_pred CceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchh---HHHHHHhHhhcCCceeecCHHHHH
Q 026688 131 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF---SRLLRQNMMQISGSYTFLSEREIE 205 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 205 (235)
||+|++..++||++++. .++++++++|+|||.+++.+...+.... .+. .................++.++|.
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~ 344 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPN-TSEESKLVSTLDNLMFITVGGRERTEKQYE 344 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCC-SSHHHHHHHHHHHHHHHHHSCCCEEHHHHH
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCc-cchHHHHHHHhhHHHHhccCCccCCHHHHH
Confidence 99999999999999887 9999999999999999999876543211 111 111111111101123457999999
Q ss_pred HHHHHcCCceeEEEe-eCc-EEEEEEec
Q 026688 206 DLCRACGLVDFKCTR-NRG-FVMFTATK 231 (235)
Q Consensus 206 ~~l~~~Gf~~~~~~~-~~~-~~~~~~~k 231 (235)
++++++||+++++.. ... +.++.++|
T Consensus 345 ~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 345 KLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 999999999988876 444 56666653
No 77
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.85 E-value=3.4e-20 Score=140.27 Aligned_cols=154 Identities=18% Similarity=0.232 Sum_probs=118.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc--CCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR--LPF 128 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~--~~~ 128 (235)
+.+.+.+. .++.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++. .++...|+.+ .++
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~ 89 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEKL----------DHVVLGDIETMDMPY 89 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTTS----------SEEEESCTTTCCCCS
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC----------CcEEEcchhhcCCCC
Confidence 34555555 557899999999999999999884 69999999999999988642 3578889876 456
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhh------cCCceeecCHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ------ISGSYTFLSER 202 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 202 (235)
+.++||+|++..+++|++++..+++++.++|+|||.+++..++.... ......+...+.. ...+.++++.+
T Consensus 90 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI---SVLAPLLAGNWTYTEYGLLDKTHIRFFTFN 166 (230)
T ss_dssp CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH---HHHHHHHTTCCCCBSSSTTBTTCCCCCCHH
T ss_pred CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH---HHHHHHhcCCceeccCCCCCcceEEEecHH
Confidence 67899999999999999999999999999999999999998765321 1111111111110 12245678999
Q ss_pred HHHHHHHHcCCceeEEEe
Q 026688 203 EIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 203 ~~~~~l~~~Gf~~~~~~~ 220 (235)
++.++++++||+++....
T Consensus 167 ~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 167 EMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHcCCeEEEEEe
Confidence 999999999999887764
No 78
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.85 E-value=6e-20 Score=148.18 Aligned_cols=167 Identities=19% Similarity=0.124 Sum_probs=124.1
Q ss_pred HHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 52 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 52 ~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
.+...+. ..+..+|||||||+|..+..++++.|..+++++|+ +.+++.+++ ..++++..+|+.+ +++.
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p~ 259 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVPS 259 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCCC
Confidence 3444444 45578999999999999999999999889999999 888876653 3579999999987 6664
Q ss_pred CceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhH--HHHHHhHhh-cCCceeecCHHHHH
Q 026688 131 SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS--RLLRQNMMQ-ISGSYTFLSEREIE 205 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~ 205 (235)
. |+|++..++|++++. .+++++++++|+|||++++.+...+......... ......... .......++.++|.
T Consensus 260 ~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~ 337 (364)
T 3p9c_A 260 G--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQ 337 (364)
T ss_dssp C--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHH
T ss_pred C--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHH
Confidence 3 999999999999866 4889999999999999999988765322111111 111111111 12345567899999
Q ss_pred HHHHHcCCceeEEEee-CcEEEEEEec
Q 026688 206 DLCRACGLVDFKCTRN-RGFVMFTATK 231 (235)
Q Consensus 206 ~~l~~~Gf~~~~~~~~-~~~~~~~~~k 231 (235)
++++++||+++++... +...++.+.|
T Consensus 338 ~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 338 ALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 9999999999988754 4555555544
No 79
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.85 E-value=3.5e-20 Score=138.64 Aligned_cols=133 Identities=25% Similarity=0.307 Sum_probs=107.6
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
++.+|||+|||+|.++..+ ...+++++|+|+.+++.++++. .++.+.+.|+.+++++.++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCCCCcEEEEEEcC
Confidence 5789999999999999877 1128999999999999999874 368899999998888778999999999
Q ss_pred cccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHh-Hh--hcCCceeecCHHHHHHHHHHcC
Q 026688 141 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN-MM--QISGSYTFLSEREIEDLCRACG 212 (235)
Q Consensus 141 ~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~~G 212 (235)
+++|++++.++++++.++|+|||.+++.+++... ++....... .. ....+.++++.+++.++++ |
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGVLEALS-----PWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS-----HHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC-----cHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 9999999999999999999999999999987542 221111111 01 1123567899999999999 7
No 80
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.85 E-value=9.8e-20 Score=134.23 Aligned_cols=138 Identities=19% Similarity=0.195 Sum_probs=115.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec-
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG- 139 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~- 139 (235)
++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++. .++.+.+.|+.+.+++.++||+|++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~~D~i~~~~ 115 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQISETDFDLIVSAG 115 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSCCCCCCEEEEEECC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCCCCCCceeEEEECC
Confidence 478999999999999999998854 9999999999999999874 35889999998877777899999998
Q ss_pred ccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeE
Q 026688 140 AAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFK 217 (235)
Q Consensus 140 ~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 217 (235)
.+++|++.. ..+++++.++|+|||.+++...... .++.+++.++++++||+++.
T Consensus 116 ~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~------------------------~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 116 NVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR------------------------GWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS------------------------SCCHHHHHHHHHHHTEEEEE
T ss_pred cHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC------------------------CcCHHHHHHHHHHcCCEEee
Confidence 678887433 6899999999999999999876532 15788999999999999887
Q ss_pred EEe---------eCcEEEEEEecC
Q 026688 218 CTR---------NRGFVMFTATKP 232 (235)
Q Consensus 218 ~~~---------~~~~~~~~~~k~ 232 (235)
... ...+.+++++|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 172 AFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp EESSTTCCBCCTTCSEEEEEEEEC
T ss_pred eecccccCcCCCCCcEEEEEEecC
Confidence 752 234667777764
No 81
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.85 E-value=6.1e-20 Score=142.49 Aligned_cols=155 Identities=17% Similarity=0.113 Sum_probs=116.7
Q ss_pred HHHhhcC-CCCCCeEEEecCCC---chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 52 LMKGYLK-PVLGGNIIDASCGS---GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 52 ~i~~~~~-~~~~~~vLdiG~G~---G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
.+.+.+. .....+|||||||+ |.++..+.+..+..+|+++|+|+.|++.|++++.. ..+++++++|+.+.+
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHH
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCch
Confidence 3334443 33458999999999 99888787777778999999999999999998753 347999999996521
Q ss_pred -----------CCCCceeEEEecccccccCC--hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCC
Q 026688 128 -----------FASSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISG 194 (235)
Q Consensus 128 -----------~~~~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (235)
++..+||+|++..++||+++ +..+++++.++|+|||+|++.+...+. ......+...+.....
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~----~~~~~~~~~~~~~~~~ 217 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG----LPAQQKLARITRENLG 217 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS----CHHHHHHHHHHHHHHS
T ss_pred hhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc----hHHHHHHHHHHHhcCC
Confidence 22358999999999999987 679999999999999999999987632 1111222222222222
Q ss_pred ceeecCHHHHHHHHHHcCCceeE
Q 026688 195 SYTFLSEREIEDLCRACGLVDFK 217 (235)
Q Consensus 195 ~~~~~~~~~~~~~l~~~Gf~~~~ 217 (235)
...+++.+++.++| .||+++.
T Consensus 218 ~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 218 EGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp CCCCBCHHHHHHTT--TTCEECT
T ss_pred CCccCCHHHHHHHh--CCCeEcc
Confidence 45668999999999 5997654
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.85 E-value=1.4e-19 Score=139.04 Aligned_cols=176 Identities=18% Similarity=0.183 Sum_probs=123.5
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
++.++......++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.++++....+ .++.+.++|+.+.+++
T Consensus 30 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~ 103 (252)
T 1wzn_A 30 VEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEIAFK 103 (252)
T ss_dssp HHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGCCCC
T ss_pred HHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhcccC
Confidence 34444444445578999999999999999999864 99999999999999999887653 3689999999887754
Q ss_pred CCceeEEEecc-cccccC--ChHHHHHHHHHhccCCcEEEEEEeccCCCcccc-------------------hhHHHHHH
Q 026688 130 SSSIDAVHAGA-AIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI-------------------PFSRLLRQ 187 (235)
Q Consensus 130 ~~~~D~i~~~~-~l~~~~--~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~-------------------~~~~~~~~ 187 (235)
++||+|++.. .+++++ +...+++++.++|+|||.+++..++........ .+...+..
T Consensus 104 -~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (252)
T 1wzn_A 104 -NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCWFYGGRDGPVVWNEQKGEEKLVIMDWREVEPAVQK 182 (252)
T ss_dssp -SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-------CCEEEEEEETTEEEEEEEEEEEETTTTE
T ss_pred -CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccchhcccCCCCeeeeccCCCeeEEEEeecccccccce
Confidence 6899999874 444443 346899999999999999998765421000000 00000000
Q ss_pred --------hHhhc--------CCceeecCHHHHHHHHHHcCCceeEEEe--------eCcEEEEEEecCC
Q 026688 188 --------NMMQI--------SGSYTFLSEREIEDLCRACGLVDFKCTR--------NRGFVMFTATKPS 233 (235)
Q Consensus 188 --------~~~~~--------~~~~~~~~~~~~~~~l~~~Gf~~~~~~~--------~~~~~~~~~~k~~ 233 (235)
..... ..+.+++++++++ +|.++||+++.+.. .+...+++++|++
T Consensus 183 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~~~~~~~~~~~r~~~va~k~~ 251 (252)
T 1wzn_A 183 LRFKRLVQILRPNGEVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGNLKRELSPNDMRYWIVGIAKS 251 (252)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEETTBSSCCTTCCEEEEEEECCC
T ss_pred eeheeeeeecccCCceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecccccccCCCCceEEEEEEeec
Confidence 00000 1124689999997 89999999888752 3467888999864
No 83
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.84 E-value=1.4e-19 Score=137.26 Aligned_cols=160 Identities=13% Similarity=0.115 Sum_probs=118.6
Q ss_pred CHHHHHHH---HhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc
Q 026688 46 PEKEFELM---KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122 (235)
Q Consensus 46 ~~~~~~~i---~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 122 (235)
..+....+ ++.+...++.+|||+|||+|.++..+++..+..+|+++|+++.+++.+++++.. ..++.+..+|
T Consensus 56 ~~~~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-----~~~v~~~~~d 130 (230)
T 1fbn_A 56 KSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-----RENIIPILGD 130 (230)
T ss_dssp TCHHHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-----CTTEEEEECC
T ss_pred hhHHHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-----CCCeEEEECC
Confidence 34455666 555555668899999999999999999986556999999999999999988654 2478999999
Q ss_pred ccc----CCCCCCceeEEEecccccccCCh---HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCc
Q 026688 123 ISR----LPFASSSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGS 195 (235)
Q Consensus 123 ~~~----~~~~~~~~D~i~~~~~l~~~~~~---~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (235)
+.. .++. ++||+|+ ++++++ ..+++++.++|+|||.+++........ ...+..
T Consensus 131 ~~~~~~~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~------------- 190 (230)
T 1fbn_A 131 ANKPQEYANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSID-VTKDPK------------- 190 (230)
T ss_dssp TTCGGGGTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTC-SSSCHH-------------
T ss_pred CCCcccccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCCCHH-------------
Confidence 987 5655 7899999 455666 678999999999999999973221111 111110
Q ss_pred eeecCHHHHHHHHHHcCCceeEEEeeCc----EEEEEEecCC
Q 026688 196 YTFLSEREIEDLCRACGLVDFKCTRNRG----FVMFTATKPS 233 (235)
Q Consensus 196 ~~~~~~~~~~~~l~~~Gf~~~~~~~~~~----~~~~~~~k~~ 233 (235)
.+..+++. +|+++||+.+....... ..+++++|++
T Consensus 191 --~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k~~ 229 (230)
T 1fbn_A 191 --EIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGIWEG 229 (230)
T ss_dssp --HHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEEECC
T ss_pred --HhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEEeCC
Confidence 12236777 88999999888775544 5778888765
No 84
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.84 E-value=1.6e-20 Score=147.14 Aligned_cols=158 Identities=18% Similarity=0.212 Sum_probs=109.0
Q ss_pred HHHHhhcCC--CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCC-------------CC--
Q 026688 51 ELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF-------------PK-- 113 (235)
Q Consensus 51 ~~i~~~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-------------~~-- 113 (235)
+.+.+.+.. .++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.|++++...... ..
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 344444422 35789999999999955444432 2349999999999999999865431100 00
Q ss_pred ------------CCeeEEeccccc-CCC-----CCCceeEEEecccccc----cCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 114 ------------ENFLLVRADISR-LPF-----ASSSIDAVHAGAAIHC----WSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 114 ------------~~~~~~~~d~~~-~~~-----~~~~~D~i~~~~~l~~----~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
..+.+..+|+.+ .|+ +.++||+|++..+++| ++++..+++++.++|||||.|++....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 014567778876 443 3456999999999999 556789999999999999999998644
Q ss_pred cCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 172 VDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
....... ........+++.+++.++|+++||+++....
T Consensus 218 ~~~~~~~-----------~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 218 EESWYLA-----------GEARLTVVPVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp SCCEEEE-----------TTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CcceEEc-----------CCeeeeeccCCHHHHHHHHHHcCCeEEEeeE
Confidence 3211000 0001123467999999999999999877653
No 85
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.84 E-value=1.1e-19 Score=142.79 Aligned_cols=152 Identities=18% Similarity=0.202 Sum_probs=117.4
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC-CCCceeEEEe
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-ASSSIDAVHA 138 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~i~~ 138 (235)
.++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.|++++...+. ..++.+.++|+.+.++ +.++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKR--RFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCC--SSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCC--CccEEEEECCccccccCCCCCcCEEEE
Confidence 457899999999999999988874 45899999999999999999876543 2468999999998776 5688999999
Q ss_pred cccccc----cCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHH----------------h--------H-
Q 026688 139 GAAIHC----WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ----------------N--------M- 189 (235)
Q Consensus 139 ~~~l~~----~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~----------------~--------~- 189 (235)
..+++| ..++..+++++.++|+|||.+++..++... ....+.. . +
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 213 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV------ILERYKQGRMSNDFYKIELEKMEDVPMESVREYR 213 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH------HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEE
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH------HHHHHccCccCCeeEEEEeCccccccccccceEE
Confidence 999977 345578999999999999999999876421 0000000 0 0
Q ss_pred ----hh-cCCceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 190 ----MQ-ISGSYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 190 ----~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
.. ...+.++++++++.++++++||+++....
T Consensus 214 ~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~ 249 (298)
T 1ri5_A 214 FTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKG 249 (298)
T ss_dssp EEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEE
T ss_pred EEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecC
Confidence 00 01124577999999999999999888763
No 86
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.84 E-value=1.4e-19 Score=134.85 Aligned_cols=138 Identities=15% Similarity=0.107 Sum_probs=115.0
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.++.+|||+|||+|.++..+++.+ ..+++++|+++.+++.|++++...+. .++++...|+.+.. .++||+|+++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNGI---YDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC---CCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEeccccccC--CCCceEEEEC
Confidence 347899999999999999988763 46999999999999999999887653 34899999997643 5789999998
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
..++++ ..+++++.++|+|||.+++.+... .+.+++.++++++||+++...
T Consensus 133 ~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~--------------------------~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 133 ILAEIL---LDLIPQLDSHLNEDGQVIFSGIDY--------------------------LQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp SCHHHH---HHHGGGSGGGEEEEEEEEEEEEEG--------------------------GGHHHHHHHHHHTTEEEEEEE
T ss_pred CcHHHH---HHHHHHHHHhcCCCCEEEEEecCc--------------------------ccHHHHHHHHHHcCCceEEee
Confidence 887763 578999999999999999977653 146788899999999999988
Q ss_pred eeCcEEEEEEecC
Q 026688 220 RNRGFVMFTATKP 232 (235)
Q Consensus 220 ~~~~~~~~~~~k~ 232 (235)
..+.+..++.+++
T Consensus 184 ~~~~w~~~~~~~~ 196 (205)
T 3grz_A 184 RAGRWIGLAISRK 196 (205)
T ss_dssp EETTEEEEEEEEC
T ss_pred ccCCEEEEEEecc
Confidence 8887777666655
No 87
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.84 E-value=1.2e-19 Score=141.87 Aligned_cols=137 Identities=15% Similarity=0.124 Sum_probs=111.0
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++...+ .++++.+.|+.+.+. .++||+|++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~-~~~fD~i~~~~ 192 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKEN----LNISTALYDINAANI-QENYDFIVSTV 192 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCGGGCCC-CSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcC----CceEEEEeccccccc-cCCccEEEEcc
Confidence 578999999999999999999865 99999999999999999988764 279999999998776 68899999999
Q ss_pred cccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEE
Q 026688 141 AIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC 218 (235)
Q Consensus 141 ~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 218 (235)
+++|++++ ..+++++.++|+|||.+++........... .......++.+++.+++.. |+++..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 193 VFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC-------------PLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp SGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-------------SSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC-------------CCCccccCCHHHHHHHhcC--CEEEEE
Confidence 99999765 489999999999999988876644321100 1122446788999998864 877665
Q ss_pred E
Q 026688 219 T 219 (235)
Q Consensus 219 ~ 219 (235)
.
T Consensus 258 ~ 258 (286)
T 3m70_A 258 N 258 (286)
T ss_dssp E
T ss_pred E
Confidence 4
No 88
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.83 E-value=1.6e-18 Score=128.90 Aligned_cols=139 Identities=16% Similarity=0.109 Sum_probs=111.8
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.......+++.+...++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++...+. ..++++..+|+.+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~ 115 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPA 115 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhh
Confidence 4455667777788777899999999999999999998 45999999999999999999887653 2379999999987
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHH
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 205 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (235)
.......||+|++...+ +.. +++++.++|+|||.+++.....+ +..++.
T Consensus 116 ~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~--------------------------~~~~~~ 164 (204)
T 3njr_A 116 ALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE--------------------------SETLLT 164 (204)
T ss_dssp GGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH--------------------------HHHHHH
T ss_pred hcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc--------------------------cHHHHH
Confidence 32233579999987644 455 99999999999999999876531 345677
Q ss_pred HHHHHcCCceeEEE
Q 026688 206 DLCRACGLVDFKCT 219 (235)
Q Consensus 206 ~~l~~~Gf~~~~~~ 219 (235)
+.+++.|+++..+.
T Consensus 165 ~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 165 QLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHCSEEEEEE
T ss_pred HHHHhCCCcEEEEE
Confidence 88899998876654
No 89
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.83 E-value=2.1e-20 Score=139.63 Aligned_cols=153 Identities=19% Similarity=0.239 Sum_probs=113.4
Q ss_pred CCCCeEEEecCCCchHHH-HHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 60 VLGGNIIDASCGSGLFSR-IFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~-~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
.++.+|||+|||+|..+. .+++.+ .+++++|+|+.+++.+++++...+ .++++.+.|+.+.+++.++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCCCCCCceeEEEE
Confidence 347899999999999844 444443 499999999999999999887643 4688999999988877789999999
Q ss_pred ccccccc--CChHHHHHHHHHhccCCcEEEEEEeccCCCccc--chhHHHHHHhHh-hcCCceeecCHHHHHHHHHHcCC
Q 026688 139 GAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL--IPFSRLLRQNMM-QISGSYTFLSEREIEDLCRACGL 213 (235)
Q Consensus 139 ~~~l~~~--~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gf 213 (235)
..+++|+ .++..+++++.++|+|||.+++.+++....... .++......... .......+++.+++.+++.+.||
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCc
Confidence 9999999 456799999999999999999999876432110 000000000000 01112368899999999999998
Q ss_pred ceeEE
Q 026688 214 VDFKC 218 (235)
Q Consensus 214 ~~~~~ 218 (235)
.....
T Consensus 176 ~~~~~ 180 (209)
T 2p8j_A 176 LFKED 180 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 65443
No 90
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.83 E-value=1.1e-19 Score=146.19 Aligned_cols=156 Identities=15% Similarity=0.152 Sum_probs=118.5
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
+..+|||+|||+|.++..++++.|..+++++|+ +.+++.+++ ..++++..+|+.+ +++ .||+|++..
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p--~~D~v~~~~ 254 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIP--NADAVLLKY 254 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCC--CCSEEEEES
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCC--CccEEEeeh
Confidence 468999999999999999999988889999999 999887764 2359999999976 544 399999999
Q ss_pred cccccCChH--HHHHHHHHhccC---CcEEEEEEeccCCCcccc--hhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCC
Q 026688 141 AIHCWSSPS--TGVAEISRVLRP---GGVFVGTTYIVDGPFNLI--PFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 213 (235)
Q Consensus 141 ~l~~~~~~~--~~l~~~~~~L~p---gG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 213 (235)
++||++++. +++++++++|+| ||++++.+...+...... ............... ...++.++|.++++++||
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-g~~~t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLN-GKERNEEEWKKLFIEAGF 333 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGT-CCCEEHHHHHHHHHHTTC
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhcc-CCCCCHHHHHHHHHHCCC
Confidence 999999887 999999999999 999999988764322110 111111111111111 455789999999999999
Q ss_pred ceeEEEeeC-cEEEEEEe
Q 026688 214 VDFKCTRNR-GFVMFTAT 230 (235)
Q Consensus 214 ~~~~~~~~~-~~~~~~~~ 230 (235)
+++++...+ ...++.++
T Consensus 334 ~~~~~~~~~~~~~vie~~ 351 (352)
T 1fp2_A 334 QHYKISPLTGFLSLIEIY 351 (352)
T ss_dssp CEEEEEEEETTEEEEEEE
T ss_pred CeeEEEecCCCcEEEEEe
Confidence 988876543 44566654
No 91
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.83 E-value=7.1e-20 Score=137.44 Aligned_cols=116 Identities=15% Similarity=0.220 Sum_probs=100.0
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+...+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++... ..++++.+.|+.+.+
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~- 110 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKR-----WSHISWAATDILQFS- 110 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTT-----CSSEEEEECCTTTCC-
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhccc-----CCCeEEEEcchhhCC-
Confidence 334455566666778999999999999999999864 999999999999999998765 337999999999877
Q ss_pred CCCceeEEEecccccccCCh---HHHHHHHHHhccCCcEEEEEEecc
Q 026688 129 ASSSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~---~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
+.++||+|++..+++|++++ ..+++++.++|+|||.+++.++..
T Consensus 111 ~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 111 TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 57899999999999999987 477999999999999999988753
No 92
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.83 E-value=5.7e-19 Score=128.43 Aligned_cols=140 Identities=18% Similarity=0.162 Sum_probs=109.9
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
..+....+++.+...++.+|||+|||+|.++..+++..+..+++++|+++.+++.+++++...+. ..++ ++..|..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 10 KQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGV--SDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTC--TTSE-EEECCTTG
T ss_pred HHHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCC--CCCE-EEecchHh
Confidence 34455667777777778899999999999999999987778999999999999999999887653 2367 77888754
Q ss_pred -CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHH
Q 026688 126 -LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 204 (235)
Q Consensus 126 -~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (235)
++...++||+|++..++++ ..+++++.++|+|||.+++.....+ +...+
T Consensus 87 ~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~ 136 (178)
T 3hm2_A 87 AFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE--------------------------SEQML 136 (178)
T ss_dssp GGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH--------------------------HHHHH
T ss_pred hhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc--------------------------cHHHH
Confidence 3322278999999999887 6789999999999999998876531 23456
Q ss_pred HHHHHHcCCceeEE
Q 026688 205 EDLCRACGLVDFKC 218 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~ 218 (235)
..++++.|++...+
T Consensus 137 ~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 137 WALRKQFGGTISSF 150 (178)
T ss_dssp HHHHHHHCCEEEEE
T ss_pred HHHHHHcCCeeEEE
Confidence 67778888776554
No 93
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=2.1e-19 Score=137.41 Aligned_cols=146 Identities=15% Similarity=0.053 Sum_probs=112.5
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC-----Ccee
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS-----SSID 134 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~D 134 (235)
.++.+|||+|||+|.++..+++.++ +|+++|+|+.+++.++++.. ..++++.++|+.+.+... ..||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc
Confidence 4578999999999999999999987 99999999999999998862 347999999998754321 2489
Q ss_pred EEEecccccccC--ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHh----------HhhcCCceeecCHH
Q 026688 135 AVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN----------MMQISGSYTFLSER 202 (235)
Q Consensus 135 ~i~~~~~l~~~~--~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 202 (235)
+|++..+++|++ +...+++++.++|+|||.+++.++.... ..+...+... ..........++.+
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC----IDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAE 202 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH----HHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHH
T ss_pred EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc----cHHHHHHHhCCCCCchhhhhccccCCCCCccCHH
Confidence 999999999998 6689999999999999999999886532 1121111111 00111122347899
Q ss_pred HHHHHHHHcCCceeEEE
Q 026688 203 EIEDLCRACGLVDFKCT 219 (235)
Q Consensus 203 ~~~~~l~~~Gf~~~~~~ 219 (235)
++.+++ +||+++...
T Consensus 203 ~~~~~~--aGf~~~~~~ 217 (245)
T 3ggd_A 203 DIELYF--PDFEILSQG 217 (245)
T ss_dssp HHHHHC--TTEEEEEEE
T ss_pred HHHHHh--CCCEEEecc
Confidence 999999 999987765
No 94
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.82 E-value=1.2e-18 Score=128.33 Aligned_cols=153 Identities=12% Similarity=0.176 Sum_probs=119.2
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
...+.+++.+...++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++...+.. ..++++...|+.+.
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~-~~~~~~~~~d~~~~- 114 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLD-NYDIRVVHSDLYEN- 114 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCT-TSCEEEEECSTTTT-
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCC-ccceEEEECchhcc-
Confidence 67778888887777899999999999999999988 459999999999999999998765421 11399999999773
Q ss_pred CCCCceeEEEecccccc-cCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHH
Q 026688 128 FASSSIDAVHAGAAIHC-WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 206 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~-~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (235)
.+.++||+|++...+++ ..+...+++++.++|+|||.+++..+... ...++.+
T Consensus 115 ~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~ 168 (194)
T 1dus_A 115 VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ--------------------------GAKSLAK 168 (194)
T ss_dssp CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH--------------------------HHHHHHH
T ss_pred cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCC--------------------------ChHHHHH
Confidence 34678999999888776 34456899999999999999999887642 1234666
Q ss_pred HHHHcCCceeEE-EeeCcEEEEEEec
Q 026688 207 LCRACGLVDFKC-TRNRGFVMFTATK 231 (235)
Q Consensus 207 ~l~~~Gf~~~~~-~~~~~~~~~~~~k 231 (235)
.+++. |..+++ .....+.++.++|
T Consensus 169 ~l~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 169 YMKDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHHHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHHHH-hcceEEEecCCcEEEEEEee
Confidence 77776 443343 4556777777775
No 95
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.82 E-value=2.6e-20 Score=141.67 Aligned_cols=152 Identities=9% Similarity=0.124 Sum_probs=107.0
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC--
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-- 126 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-- 126 (235)
..+.+...+. .++.+|||||||+|..+..+++..+ .+++++|+|+.+++.|+++.... ..++.+..+|....
T Consensus 49 ~m~~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~----~~~~~~~~~~a~~~~~ 122 (236)
T 3orh_A 49 YMHALAAAAS-SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAP 122 (236)
T ss_dssp HHHHHHHHHT-TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGG
T ss_pred HHHHHHHhhc-cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC----CCceEEEeehHHhhcc
Confidence 3444444444 4578999999999999999988765 58999999999999999988765 34678888887653
Q ss_pred CCCCCceeEEEe-----cccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCH
Q 026688 127 PFASSSIDAVHA-----GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 201 (235)
Q Consensus 127 ~~~~~~~D~i~~-----~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (235)
++++++||.|++ ...++|..++..+++++.|+|||||.+++...... . ...............
T Consensus 123 ~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~---------~---~~~~~~~~~~~~~~~ 190 (236)
T 3orh_A 123 TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSW---------G---ELMKSKYSDITIMFE 190 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHH---------H---HHTTTTCSCHHHHHH
T ss_pred cccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCc---------h---hhhhhhhhhhhhhhH
Confidence 466788999985 34566777888999999999999999987432210 0 000000011111224
Q ss_pred HHHHHHHHHcCCceeEE
Q 026688 202 REIEDLCRACGLVDFKC 218 (235)
Q Consensus 202 ~~~~~~l~~~Gf~~~~~ 218 (235)
+.+...|.++||++..+
T Consensus 191 ~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 191 ETQVPALLEAGFRRENI 207 (236)
T ss_dssp HHTHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHcCCeEEEE
Confidence 55667788999986444
No 96
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.82 E-value=8.8e-19 Score=128.77 Aligned_cols=137 Identities=19% Similarity=0.200 Sum_probs=111.6
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 45 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
........+.+.+...++.+|||+|||+|..+..+++.+ .+++++|+++.+++.+++++...+. ..++.+.+.|+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~ 92 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGL--GDNVTLMEGDAP 92 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC--CTTEEEEESCHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCC--CcceEEEecCHH
Confidence 356677777887877788999999999999999999887 5999999999999999998877653 257899999987
Q ss_pred cCCCCC-CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHH
Q 026688 125 RLPFAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 125 ~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
+ +++. +.||+|++..++++ ...+++++.++|+|||.+++..+.. .+..+
T Consensus 93 ~-~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~--------------------------~~~~~ 142 (192)
T 1l3i_A 93 E-ALCKIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILL--------------------------ETKFE 142 (192)
T ss_dssp H-HHTTSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBH--------------------------HHHHH
T ss_pred H-hcccCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCc--------------------------chHHH
Confidence 6 2222 58999999877654 4788999999999999999987643 12456
Q ss_pred HHHHHHHcCCce
Q 026688 204 IEDLCRACGLVD 215 (235)
Q Consensus 204 ~~~~l~~~Gf~~ 215 (235)
+.+.+++.||.+
T Consensus 143 ~~~~l~~~g~~~ 154 (192)
T 1l3i_A 143 AMECLRDLGFDV 154 (192)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHCCCce
Confidence 788899999943
No 97
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.81 E-value=3.6e-19 Score=139.89 Aligned_cols=159 Identities=17% Similarity=0.130 Sum_probs=108.5
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCC---CCCeeEEeccc------ccC--CCC
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADI------SRL--PFA 129 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~---~~~~~~~~~d~------~~~--~~~ 129 (235)
++.+|||+|||+|..+..+++.+ ..+|+|+|+|+.+++.|+++....+... .-++++.+.|+ .++ +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46899999999998777666654 3589999999999999999886543100 00256777877 222 245
Q ss_pred CCceeEEEeccccccc---CChHHHHHHHHHhccCCcEEEEEEeccCCCcccc-----------hhHHHH---H-----H
Q 026688 130 SSSIDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI-----------PFSRLL---R-----Q 187 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~-----------~~~~~~---~-----~ 187 (235)
.++||+|+|..++|++ .+...+++++.++|||||.+++.+++........ +....+ . .
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 6799999999999875 3446899999999999999999988643200000 000000 0 0
Q ss_pred --hH--h--hcCCceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 188 --NM--M--QISGSYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 188 --~~--~--~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
.+ . .......+++++++.++++++||+++....
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 00 0 001113467889999999999999988754
No 98
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.81 E-value=8.2e-19 Score=134.83 Aligned_cols=136 Identities=14% Similarity=0.173 Sum_probs=114.0
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.++.+|||+|||+|.++..+++.++ +|+++|+++.+++.+++++..++. . +++...|+.+. ++.++||+|+++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~---~-v~~~~~d~~~~-~~~~~fD~Vv~n 191 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGV---R-PRFLEGSLEAA-LPFGPFDLLVAN 191 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTC---C-CEEEESCHHHH-GGGCCEEEEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChhhc-CcCCCCCEEEEC
Confidence 4478999999999999999999876 999999999999999999887643 2 88889998762 345789999987
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
...++ ...+++.+.++|+|||.++++.... .+.+++.+.++++||+++...
T Consensus 192 ~~~~~---~~~~l~~~~~~LkpgG~lils~~~~--------------------------~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 192 LYAEL---HAALAPRYREALVPGGRALLTGILK--------------------------DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp CCHHH---HHHHHHHHHHHEEEEEEEEEEEEEG--------------------------GGHHHHHHHHHHTTCEEEEEE
T ss_pred CcHHH---HHHHHHHHHHHcCCCCEEEEEeecc--------------------------CCHHHHHHHHHHCCCEEEEEe
Confidence 65553 3578999999999999999987653 135788999999999999998
Q ss_pred eeCcEEEEEEec
Q 026688 220 RNRGFVMFTATK 231 (235)
Q Consensus 220 ~~~~~~~~~~~k 231 (235)
..+.+..++++|
T Consensus 243 ~~~~W~~l~~~k 254 (254)
T 2nxc_A 243 AEGEWVLLAYGR 254 (254)
T ss_dssp EETTEEEEEEEC
T ss_pred ccCCeEEEEEEC
Confidence 888888888875
No 99
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.81 E-value=4.5e-19 Score=142.94 Aligned_cols=157 Identities=16% Similarity=0.142 Sum_probs=118.3
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
+..+|||||||+|.++..+++++|..+++++|+ +.+++.+++ ..++++..+|+.+ +++ .||+|++..
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEcc
Confidence 468999999999999999999998889999999 788876653 2359999999987 654 499999999
Q ss_pred cccccCChH--HHHHHHHHhccC---CcEEEEEEeccCCCccc--chhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCC
Q 026688 141 AIHCWSSPS--TGVAEISRVLRP---GGVFVGTTYIVDGPFNL--IPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 213 (235)
Q Consensus 141 ~l~~~~~~~--~~l~~~~~~L~p---gG~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 213 (235)
++||++++. +++++++++|+| ||.+++.+...+..... ....................++.++|.++++++||
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 339 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 339 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTC
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCC
Confidence 999999877 999999999999 99999988765432111 01111111111111112346799999999999999
Q ss_pred ceeEEEeeCc-EEEEEEe
Q 026688 214 VDFKCTRNRG-FVMFTAT 230 (235)
Q Consensus 214 ~~~~~~~~~~-~~~~~~~ 230 (235)
+++++...+. ..++.++
T Consensus 340 ~~~~~~~~~~~~~vie~~ 357 (358)
T 1zg3_A 340 SSYKITPISGFKSLIEVY 357 (358)
T ss_dssp CEEEEEEETTTEEEEEEE
T ss_pred CeeEEEecCCCcEEEEEe
Confidence 9988876554 4555554
No 100
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.81 E-value=1.9e-18 Score=134.45 Aligned_cols=156 Identities=13% Similarity=0.095 Sum_probs=120.2
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
+..+.+.+.+.+.+. .++.+|||+|||+|..+..+++..+..+|+++|+|+.+++.+++++...+. .++++.++|+
T Consensus 93 ~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~ 168 (276)
T 2b3t_A 93 PDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDW 168 (276)
T ss_dssp TTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCST
T ss_pred chHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcch
Confidence 445566777777775 457899999999999999999887778999999999999999999877653 3799999999
Q ss_pred ccCCCCCCceeEEEecc-------------cccccC------------ChHHHHHHHHHhccCCcEEEEEEeccCCCccc
Q 026688 124 SRLPFASSSIDAVHAGA-------------AIHCWS------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL 178 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~-------------~l~~~~------------~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~ 178 (235)
.+. ++.++||+|+++. +++|.+ ....+++++.++|+|||.+++....
T Consensus 169 ~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~------- 240 (276)
T 2b3t_A 169 FSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW------- 240 (276)
T ss_dssp TGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS-------
T ss_pred hhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc-------
Confidence 763 3357899999983 333322 2357889999999999999986321
Q ss_pred chhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEE--eeCcEEEEEEec
Q 026688 179 IPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT--RNRGFVMFTATK 231 (235)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~--~~~~~~~~~~~k 231 (235)
.+.+++.++++++||..+.+. ..+...+++++|
T Consensus 241 --------------------~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 241 --------------------QQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp --------------------SCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred --------------------hHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 356788999999999876654 344555666654
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.80 E-value=9.7e-20 Score=138.62 Aligned_cols=117 Identities=9% Similarity=0.193 Sum_probs=91.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL- 126 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~- 126 (235)
...+.+.... ..++.+|||+|||+|.++..+++.++ .+|+++|+|+.+++.|+++.... ..++.+.++|+.+.
T Consensus 48 ~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~ 121 (236)
T 1zx0_A 48 PYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVA 121 (236)
T ss_dssp HHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHG
T ss_pred HHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhc----CCCeEEEecCHHHhh
Confidence 4445555544 34578999999999999999977543 48999999999999999987654 24789999999887
Q ss_pred -CCCCCceeEEEe-cccccccCC-----hHHHHHHHHHhccCCcEEEEEEec
Q 026688 127 -PFASSSIDAVHA-GAAIHCWSS-----PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 -~~~~~~~D~i~~-~~~l~~~~~-----~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
++++++||+|++ ...+ +..+ ...+++++.++|||||.+++.+..
T Consensus 122 ~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 122 PTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp GGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 777889999999 5543 2222 247799999999999999986654
No 102
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.80 E-value=4e-18 Score=123.15 Aligned_cols=117 Identities=15% Similarity=0.102 Sum_probs=97.6
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. ..++++.++|+.+ +++.++||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------------~~~~~~~~~d~~~-~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------------HRGGNLVRADLLC-SINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT------------CSSSCEEECSTTT-TBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc------------ccCCeEEECChhh-hcccCCCCEEEEC
Confidence 446799999999999999999886 99999999999987 1268899999987 5556899999999
Q ss_pred ccccccCCh---------HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHH
Q 026688 140 AAIHCWSSP---------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 210 (235)
Q Consensus 140 ~~l~~~~~~---------~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (235)
..+++.++. ..+++++.+.+ |||.+++..... .+.+++.+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------------------------~~~~~l~~~l~~ 138 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------------------------NRPKEVLARLEE 138 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------------------------GCHHHHHHHHHH
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------------------------CCHHHHHHHHHH
Confidence 888866554 47888999999 999999987653 356788999999
Q ss_pred cCCceeEEE
Q 026688 211 CGLVDFKCT 219 (235)
Q Consensus 211 ~Gf~~~~~~ 219 (235)
+||+...+.
T Consensus 139 ~gf~~~~~~ 147 (170)
T 3q87_B 139 RGYGTRILK 147 (170)
T ss_dssp TTCEEEEEE
T ss_pred CCCcEEEEE
Confidence 999876665
No 103
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.80 E-value=8.7e-19 Score=136.31 Aligned_cols=135 Identities=19% Similarity=0.171 Sum_probs=106.2
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhc-CCCCCCCeeEEecccccCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLP 127 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~~ 127 (235)
.+.+...+...++.+|||+|||+|.++..+++. .+..+|+++|+++.+++.+++++... + ..++++..+|+.+ +
T Consensus 99 ~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~-~ 174 (275)
T 1yb2_A 99 ASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD---IGNVRTSRSDIAD-F 174 (275)
T ss_dssp -------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC---CTTEEEECSCTTT-C
T ss_pred HHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC---CCcEEEEECchhc-c
Confidence 346666677777899999999999999999987 56679999999999999999998765 4 3579999999987 5
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHH
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 207 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (235)
++.++||+|++ +.+++..+++++.++|+|||.+++.++... ..+++.+.
T Consensus 175 ~~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--------------------------~~~~~~~~ 223 (275)
T 1yb2_A 175 ISDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD--------------------------QSEKTVLS 223 (275)
T ss_dssp CCSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH--------------------------HHHHHHHH
T ss_pred CcCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--------------------------HHHHHHHH
Confidence 55678999997 577888999999999999999999876421 23456677
Q ss_pred HHHcCCceeEEE
Q 026688 208 CRACGLVDFKCT 219 (235)
Q Consensus 208 l~~~Gf~~~~~~ 219 (235)
++++||..++..
T Consensus 224 l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 224 LSASGMHHLETV 235 (275)
T ss_dssp SGGGTEEEEEEE
T ss_pred HHHCCCeEEEEE
Confidence 778888776654
No 104
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.80 E-value=6.2e-19 Score=151.10 Aligned_cols=167 Identities=10% Similarity=0.071 Sum_probs=123.5
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCC---CCCCCeeEEeccc
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESN---FPKENFLLVRADI 123 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~~~~~d~ 123 (235)
...+.+.+.+...++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.|++++..... ....++++.++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 455666777665568999999999999999999987 446999999999999999987754211 0135799999999
Q ss_pred ccCCCCCCceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHH--------HH----hH
Q 026688 124 SRLPFASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLL--------RQ----NM 189 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~--------~~----~~ 189 (235)
.++++..+.||+|++..+++|++++. .+++++.++|+|| .+++.+++.+. .+....+ .. ..
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ey----N~lF~~Lnp~tr~~dPd~~~~~~ 862 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEF----NTILQRSTPETQEENNSEPQLPK 862 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGG----HHHHTCC------------CCSS
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchh----hhhhhhccccccccccccccccc
Confidence 99888788999999999999999875 5899999999999 88888876531 1111000 00 00
Q ss_pred hhcCCceeecCHHHHHH----HHHHcCCceeEEE
Q 026688 190 MQISGSYTFLSEREIED----LCRACGLVDFKCT 219 (235)
Q Consensus 190 ~~~~~~~~~~~~~~~~~----~l~~~Gf~~~~~~ 219 (235)
.....+...++.++++. +.++.||.+....
T Consensus 863 fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvG 896 (950)
T 3htx_A 863 FRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSG 896 (950)
T ss_dssp CSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccccCcceeecHHHHHHHHHHHHHhcCcEEEEEc
Confidence 11223445677888777 6777899764443
No 105
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.80 E-value=3e-19 Score=134.22 Aligned_cols=154 Identities=18% Similarity=0.198 Sum_probs=107.6
Q ss_pred hhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhh----hcCCCCCCCeeEEecccccCCCCC
Q 026688 55 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ----QESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
+.+...++.+|||+|||+|.++..+++..|..+|+|+|+|+.+++.+.++.. ..+ ..++.+.++|+.+++++.
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~---~~~v~~~~~d~~~l~~~~ 97 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGG---LPNLLYLWATAERLPPLS 97 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC---CTTEEEEECCSTTCCSCC
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC---CCceEEEecchhhCCCCC
Confidence 3344556789999999999999999999888899999999998886443332 222 347999999999988765
Q ss_pred CceeEEEecc---cc--cccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHH
Q 026688 131 SSIDAVHAGA---AI--HCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 205 (235)
Q Consensus 131 ~~~D~i~~~~---~l--~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (235)
+. |.|.+.. .. +|++++..+++++.++|||||.+++........ ...+. + .........+..+++.
T Consensus 98 ~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~---~----~~~~~~~~~~~~~~l~ 168 (218)
T 3mq2_A 98 GV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWR-PSVPE---V----GEHPEPTPDSADEWLA 168 (218)
T ss_dssp CE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBT-TBCGG---G----TTCCCCCHHHHHHHHH
T ss_pred CC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccc-ccccc---c----ccCCccchHHHHHHHH
Confidence 55 7666332 23 377888999999999999999999965433211 11110 0 0111111122345588
Q ss_pred HHHHHcCCceeEEEe
Q 026688 206 DLCRACGLVDFKCTR 220 (235)
Q Consensus 206 ~~l~~~Gf~~~~~~~ 220 (235)
.+++++||++..+..
T Consensus 169 ~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 169 PRYAEAGWKLADCRY 183 (218)
T ss_dssp HHHHHTTEEEEEEEE
T ss_pred HHHHHcCCCceeeec
Confidence 899999999877764
No 106
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.80 E-value=1e-17 Score=122.16 Aligned_cols=137 Identities=15% Similarity=0.175 Sum_probs=112.6
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
+......+.+.+.+...++.+|||+|||+|.++..+++ +..+++++|+++.+++.+++++...+ ..++++.+.|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~d~ 92 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFN---IKNCQIIKGRA 92 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTT---CCSEEEEESCH
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcC---CCcEEEEECCc
Confidence 34567778888888777789999999999999999988 45699999999999999999988765 24799999999
Q ss_pred ccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHH
Q 026688 124 SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
.+ +++.++||+|++..+ .+...+++++.++ |||.+++..+... +..+
T Consensus 93 ~~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~--------------------------~~~~ 139 (183)
T 2yxd_A 93 ED-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE--------------------------NAAK 139 (183)
T ss_dssp HH-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH--------------------------HHHH
T ss_pred cc-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc--------------------------cHHH
Confidence 87 555678999999887 5677889999998 9999999876531 2456
Q ss_pred HHHHHHHcCCceeEE
Q 026688 204 IEDLCRACGLVDFKC 218 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~ 218 (235)
+.+.++++||.+..+
T Consensus 140 ~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 140 IINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCeEEEE
Confidence 788899999865443
No 107
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.80 E-value=1.5e-18 Score=129.97 Aligned_cols=118 Identities=24% Similarity=0.318 Sum_probs=98.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
....+.+...+ .++.+|||+|||+|.++..+++.++. +++++|+++.+++.++++... ..++.+.+.|+.+.
T Consensus 30 ~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 30 SSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKL 101 (215)
T ss_dssp HHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSC
T ss_pred HHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcC
Confidence 34455555555 34789999999999999999998753 899999999999999998754 34789999999888
Q ss_pred CCCCCceeEEEecccccccC---------------ChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 127 PFASSSIDAVHAGAAIHCWS---------------SPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~---------------~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
+++.++||+|++..+++++. +...+++++.++|+|||.+++.++..
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 87778999999998887654 44689999999999999999988754
No 108
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.80 E-value=1.3e-18 Score=134.29 Aligned_cols=154 Identities=22% Similarity=0.292 Sum_probs=111.6
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
.+.+...+. ++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++.. . .+.+.|+.+++++
T Consensus 45 ~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~ 111 (260)
T 2avn_A 45 GSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFP 111 (260)
T ss_dssp HHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSC
T ss_pred HHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCC
Confidence 344444444 578999999999999999998854 99999999999999998743 1 2788999888877
Q ss_pred CCceeEEEeccccccc-CChHHHHHHHHHhccCCcEEEEEEeccCCCccc---chhHHHHHHhHhhcC-C--------ce
Q 026688 130 SSSIDAVHAGAAIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IPFSRLLRQNMMQIS-G--------SY 196 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~-~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~--------~~ 196 (235)
.++||+|++..+++|+ +++..+++++.++|+|||.+++..++....... ..........+.... . ..
T Consensus 112 ~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNS 191 (260)
T ss_dssp TTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEE
T ss_pred CCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEE
Confidence 7899999998877666 778899999999999999999988764210000 000011111111000 0 12
Q ss_pred eecCHHHHHHHHHHcCCceeEEE
Q 026688 197 TFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 197 ~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
.+++++++.++ +||+++.+.
T Consensus 192 ~~~~~~~l~~l---aGf~~~~~~ 211 (260)
T 2avn_A 192 YAFKPEDLDSL---EGFETVDIR 211 (260)
T ss_dssp ECBCGGGGSSC---TTEEEEEEE
T ss_pred eccCHHHHHHh---cCceEEEEE
Confidence 36899999888 999988775
No 109
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.80 E-value=4e-18 Score=127.74 Aligned_cols=107 Identities=20% Similarity=0.141 Sum_probs=90.4
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC--CCCCceeEEEe
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 138 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~i~~ 138 (235)
++.+|||+|||+|.++..+++..|...++|+|+++.+++.|++++...+ ..++.++++|+.+++ ++.++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG---VPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC---CSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 4679999999999999999999888899999999999999999987765 357999999998865 66778999998
Q ss_pred cccccccC--------ChHHHHHHHHHhccCCcEEEEEEe
Q 026688 139 GAAIHCWS--------SPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 139 ~~~l~~~~--------~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+....+.. ....+++++.++|+|||.+++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 86543322 124789999999999999998764
No 110
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.80 E-value=8.2e-18 Score=126.25 Aligned_cols=161 Identities=13% Similarity=0.074 Sum_probs=115.1
Q ss_pred CHHHHHHHHh---hcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec
Q 026688 46 PEKEFELMKG---YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121 (235)
Q Consensus 46 ~~~~~~~i~~---~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 121 (235)
..++...+.. .+...|+.+|||+|||+|.++..+++. ++..+|+++|+++.+++.++++... ..++..+..
T Consensus 59 rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~-----~~ni~~V~~ 133 (233)
T 4df3_A 59 RSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD-----RRNIFPILG 133 (233)
T ss_dssp TCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT-----CTTEEEEES
T ss_pred chHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh-----hcCeeEEEE
Confidence 3455555554 455778999999999999999999987 7888999999999999999988765 347888888
Q ss_pred cccc---CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceee
Q 026688 122 DISR---LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTF 198 (235)
Q Consensus 122 d~~~---~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (235)
|... .+...+.+|+|++. +.+..++..++.++.++|||||.++++....... ... ....
T Consensus 134 d~~~p~~~~~~~~~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d-~~~--------------p~~~- 195 (233)
T 4df3_A 134 DARFPEKYRHLVEGVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSID-VTT--------------EPSE- 195 (233)
T ss_dssp CTTCGGGGTTTCCCEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHH-HHT--------------CCCH-
T ss_pred eccCccccccccceEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccCC-CCC--------------ChHH-
Confidence 8754 34456789998864 3444566789999999999999999876433100 000 0000
Q ss_pred cCHHHHHHHHHHcCCceeEEEeeCc----EEEEEEe
Q 026688 199 LSEREIEDLCRACGLVDFKCTRNRG----FVMFTAT 230 (235)
Q Consensus 199 ~~~~~~~~~l~~~Gf~~~~~~~~~~----~~~~~~~ 230 (235)
...+..+.|+++||++++.....+ ..+++++
T Consensus 196 -~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 196 -VYKREIKTLMDGGLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp -HHHHHHHHHHHTTCCEEEEEECTTTSTTEEEEEEC
T ss_pred -HHHHHHHHHHHCCCEEEEEEccCCCCCceEEEEEE
Confidence 112335677899999988765443 4555554
No 111
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.79 E-value=8.1e-19 Score=126.08 Aligned_cols=164 Identities=7% Similarity=0.024 Sum_probs=118.7
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
|..+...+.+.+++.. +.+|||+|||+|.++..++...|.++|+++|+|+.|++.+++++...+. ..++.+ .|.
T Consensus 34 p~ld~fY~~~~~~l~~--~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~--~~~v~~--~d~ 107 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKH--VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT--TIKYRF--LNK 107 (200)
T ss_dssp GGHHHHHHHHHHHSCC--CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC--SSEEEE--ECC
T ss_pred HhHHHHHHHHHhhcCC--CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CccEEE--ecc
Confidence 4456667777777755 7899999999999999999998888999999999999999999987653 114444 666
Q ss_pred ccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHH
Q 026688 124 SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
... .+.+.||+|++..++|++++.+..+.++.+.|+|||.++-- ++..-. . ........-...
T Consensus 108 ~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf-ptksl~-G--------------r~~gm~~~Y~~~ 170 (200)
T 3fzg_A 108 ESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF-PIKSLS-G--------------KEKGMEENYQLW 170 (200)
T ss_dssp HHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE-ECCCCC-----------------CTTCCCCHHHH
T ss_pred ccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe-ChHHhc-C--------------CCcchhhhHHHH
Confidence 544 34688999999999999966677778999999998766643 332110 0 000111122345
Q ss_pred HHHHHHHcCCceeEEEeeCcEEEEEEec
Q 026688 204 IEDLCRACGLVDFKCTRNRGFVMFTATK 231 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~k 231 (235)
|++.+ ...+.+++...++.=.+|+.+|
T Consensus 171 ~~~~~-~~~~~~~~~~~~~nEl~y~~~~ 197 (200)
T 3fzg_A 171 FESFT-KGWIKILDSKVIGNELVYITSG 197 (200)
T ss_dssp HHHHT-TTTSCEEEEEEETTEEEEEECC
T ss_pred HHHhc-cCcceeeeeeeeCceEEEEEec
Confidence 56655 5567778888888766666665
No 112
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.79 E-value=2.4e-18 Score=131.23 Aligned_cols=129 Identities=15% Similarity=0.004 Sum_probs=103.4
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC---CCceeEE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDAV 136 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~i 136 (235)
.++.+|||+|||+|..+..++...+..+|+++|+|+.+++.++++....+ ..++++.++|+.+++.. .++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ---LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEeccHHHhcccccccCCccEE
Confidence 35789999999999999999987677799999999999999999987765 34699999999876643 5789999
Q ss_pred EecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCcee
Q 026688 137 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDF 216 (235)
Q Consensus 137 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 216 (235)
++.. +.+...+++.+.++|+|||.+++...... . -...++.+.+++.||.+.
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~--------~----------------~~~~~~~~~l~~~g~~~~ 197 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALKAASA--------E----------------EELNAGKKAITTLGGELE 197 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-C--------H----------------HHHHHHHHHHHHTTEEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc--------h----------------HHHHHHHHHHHHcCCeEe
Confidence 9866 46678999999999999999988632210 0 012456788899999877
Q ss_pred EEE
Q 026688 217 KCT 219 (235)
Q Consensus 217 ~~~ 219 (235)
...
T Consensus 198 ~~~ 200 (240)
T 1xdz_A 198 NIH 200 (240)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 113
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.79 E-value=5.5e-18 Score=130.48 Aligned_cols=142 Identities=18% Similarity=0.167 Sum_probs=115.4
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhc-CCCCCCCeeEEec
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRA 121 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~ 121 (235)
+........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.+++++... + ..++++...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~ 155 (258)
T 2pwy_A 79 PTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLG 155 (258)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEES
T ss_pred cccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEEC
Confidence 344556677788888778899999999999999999998 66679999999999999999998765 4 357999999
Q ss_pred ccccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCH
Q 026688 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 201 (235)
Q Consensus 122 d~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (235)
|+.+.+++.++||+|++ +.+++..+++++.++|+|||.+++..+... ..
T Consensus 156 d~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~ 204 (258)
T 2pwy_A 156 KLEEAELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT--------------------------QV 204 (258)
T ss_dssp CGGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH--------------------------HH
T ss_pred chhhcCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH--------------------------HH
Confidence 99887676788999997 467778899999999999999999876421 12
Q ss_pred HHHHHHHHHcCCceeEEE
Q 026688 202 REIEDLCRACGLVDFKCT 219 (235)
Q Consensus 202 ~~~~~~l~~~Gf~~~~~~ 219 (235)
.++...++++||..+...
T Consensus 205 ~~~~~~l~~~gf~~~~~~ 222 (258)
T 2pwy_A 205 LELVRAAEAHPFRLERVL 222 (258)
T ss_dssp HHHHHHHTTTTEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEE
Confidence 455667777888765544
No 114
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.79 E-value=3.6e-18 Score=131.34 Aligned_cols=143 Identities=21% Similarity=0.272 Sum_probs=117.0
Q ss_pred CCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec
Q 026688 43 FPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121 (235)
Q Consensus 43 ~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 121 (235)
.+........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|++++...+. ..++++...
T Consensus 75 ~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~ 152 (255)
T 3mb5_A 75 QIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLK 152 (255)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECS
T ss_pred ccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEEC
Confidence 3345566778888888888899999999999999999998 7778999999999999999999887664 345999999
Q ss_pred ccccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCH
Q 026688 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 201 (235)
Q Consensus 122 d~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (235)
|+.+. ++.++||+|++ +.+++..+++++.++|+|||.+++..+..+ ..
T Consensus 153 d~~~~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~ 200 (255)
T 3mb5_A 153 DIYEG-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN--------------------------QV 200 (255)
T ss_dssp CGGGC-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH--------------------------HH
T ss_pred chhhc-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH--------------------------HH
Confidence 99864 55678999997 467778899999999999999998765421 23
Q ss_pred HHHHHHHHHcC--CceeEEE
Q 026688 202 REIEDLCRACG--LVDFKCT 219 (235)
Q Consensus 202 ~~~~~~l~~~G--f~~~~~~ 219 (235)
.++.+.++++| |..++..
T Consensus 201 ~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 201 MRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp HHHHHHHHHTGGGBSCCEEE
T ss_pred HHHHHHHHHcCCCccccEEE
Confidence 56677888898 8766554
No 115
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.79 E-value=2.2e-18 Score=130.27 Aligned_cols=133 Identities=19% Similarity=0.241 Sum_probs=103.1
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
+....+.+.+..... .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++ ..++++.+.|+
T Consensus 32 ~~~~~l~~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~ 100 (226)
T 3m33_A 32 PDPELTFDLWLSRLL-TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNG 100 (226)
T ss_dssp SCTTHHHHHHHHHHC-CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCS
T ss_pred CCHHHHHHHHHHhcC-CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcch
Confidence 334555665555333 3478999999999999999999854 999999999999999987 23689999999
Q ss_pred -ccCCCC-CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCH
Q 026688 124 -SRLPFA-SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 201 (235)
Q Consensus 124 -~~~~~~-~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (235)
..+|++ .++||+|++. .++..+++++.++|+|||.++. .. ...+.
T Consensus 101 ~~~~~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~--~~-------------------------~~~~~ 147 (226)
T 3m33_A 101 KGELPAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLY--VG-------------------------PRLNV 147 (226)
T ss_dssp CSSCCTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEE--EE-------------------------SSSCC
T ss_pred hhccCCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEE--eC-------------------------CcCCH
Confidence 456776 7899999986 4667889999999999999991 11 12355
Q ss_pred HHHHHHHHHcCCceeEEEe
Q 026688 202 REIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 202 ~~~~~~l~~~Gf~~~~~~~ 220 (235)
.++.+.++++||.++....
T Consensus 148 ~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 148 PEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp THHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEEe
Confidence 6777888888887766543
No 116
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.79 E-value=2.4e-18 Score=128.95 Aligned_cols=126 Identities=17% Similarity=0.233 Sum_probs=104.8
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.++.+|||+|||+|.++..++ .+++++|+++. ++.+...|+.+.+++.++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEEe
Confidence 456899999999999988773 38999999986 3557889998888777899999999
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
.++|+ .++..+++++.++|+|||.+++.++... +.+.+++.++++++||+++...
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~------------------------~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSSR------------------------FEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGGG------------------------CSCHHHHHHHHHHTTEEEEEEE
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCCC------------------------CCCHHHHHHHHHHCCCEEEEEe
Confidence 99974 8889999999999999999999876531 1378999999999999988876
Q ss_pred eeC-cEEEEEEecCC
Q 026688 220 RNR-GFVMFTATKPS 233 (235)
Q Consensus 220 ~~~-~~~~~~~~k~~ 233 (235)
..+ .+.+++++|..
T Consensus 178 ~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 178 LTNSHFFLFDFQKTG 192 (215)
T ss_dssp CCSTTCEEEEEEECS
T ss_pred cCCCeEEEEEEEecC
Confidence 443 56777887753
No 117
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.79 E-value=8.3e-18 Score=129.66 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=109.6
Q ss_pred HHHHHhhcCCC-CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-
Q 026688 50 FELMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP- 127 (235)
Q Consensus 50 ~~~i~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~- 127 (235)
...+..++... ++.+|||+|||+|..+..++++++. +|+|+|+++.+++.|++++...+. ..++++.++|+.+.+
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~--~~~v~~~~~D~~~~~~ 113 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQL--EDQIEIIEYDLKKITD 113 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTC--TTTEEEECSCGGGGGG
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCC--cccEEEEECcHHHhhh
Confidence 34555666666 7899999999999999999998753 999999999999999999987765 447999999998864
Q ss_pred -CCCCceeEEEeccccccc-----C---------------ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHH
Q 026688 128 -FASSSIDAVHAGAAIHCW-----S---------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR 186 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~-----~---------------~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~ 186 (235)
++.++||+|+++..+... . +...+++.+.++|+|||.+++....
T Consensus 114 ~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--------------- 178 (259)
T 3lpm_A 114 LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP--------------- 178 (259)
T ss_dssp TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT---------------
T ss_pred hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH---------------
Confidence 446899999997554332 1 1246899999999999999985432
Q ss_pred HhHhhcCCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 187 QNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
....++...+++.||....+.
T Consensus 179 ------------~~~~~~~~~l~~~~~~~~~~~ 199 (259)
T 3lpm_A 179 ------------ERLLDIIDIMRKYRLEPKRIQ 199 (259)
T ss_dssp ------------TTHHHHHHHHHHTTEEEEEEE
T ss_pred ------------HHHHHHHHHHHHCCCceEEEE
Confidence 234677888899999876654
No 118
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.79 E-value=2e-17 Score=125.23 Aligned_cols=131 Identities=13% Similarity=0.069 Sum_probs=102.9
Q ss_pred CCCCCeEEEecCC-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-CCCCCceeEE
Q 026688 59 PVLGGNIIDASCG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAV 136 (235)
Q Consensus 59 ~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~i 136 (235)
..++.+|||+||| +|.++..+++.. ..+|+++|+++.+++.|++++...+. ++++.++|+... +++.++||+|
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~----~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS----NVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC----CCEEEECSSCSSTTTCCSCEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC----CcEEEeCCchhhhhcccCceeEE
Confidence 3457899999999 999999999884 35999999999999999999887642 789999997433 3446899999
Q ss_pred EecccccccCC-------------------hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCcee
Q 026688 137 HAGAAIHCWSS-------------------PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 197 (235)
Q Consensus 137 ~~~~~l~~~~~-------------------~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (235)
+++..+++..+ ...+++++.++|+|||.+++..+...
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------------ 183 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE------------------------ 183 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH------------------------
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH------------------------
Confidence 99866654432 26789999999999999999765421
Q ss_pred ecCHHHHHHHHHHcCCceeEEE
Q 026688 198 FLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 198 ~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
....++.+.++++||.+..+.
T Consensus 184 -~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 184 -KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEE
T ss_pred -hHHHHHHHHHHHcCCceEEEE
Confidence 134678899999999766654
No 119
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.79 E-value=2.1e-19 Score=134.55 Aligned_cols=155 Identities=17% Similarity=0.005 Sum_probs=99.6
Q ss_pred HHHHHHHHhhcCC-CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 47 EKEFELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 47 ~~~~~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
....+.+.+.+.. .++.+|||+|||+|.++..+++.++..+++++|+++.+++.+++++...+ . ++++.++|+.+
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~~~ 90 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG---A-VVDWAAADGIE 90 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC---C-ceEEEEcchHh
Confidence 4456667776654 56889999999999999999999887899999999999999999887653 2 68888899877
Q ss_pred CCCCC-----CceeEEEecccccccCCh--------------------------HHHHHHHHHhccCCcEEEEEEeccCC
Q 026688 126 LPFAS-----SSIDAVHAGAAIHCWSSP--------------------------STGVAEISRVLRPGGVFVGTTYIVDG 174 (235)
Q Consensus 126 ~~~~~-----~~~D~i~~~~~l~~~~~~--------------------------~~~l~~~~~~L~pgG~li~~~~~~~~ 174 (235)
+++. ++||+|+++..+++..+. ..+++++.++|+|||.+++.....
T Consensus 91 -~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-- 167 (215)
T 4dzr_A 91 -WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH-- 167 (215)
T ss_dssp -HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT--
T ss_pred -hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC--
Confidence 4444 899999997554332211 567889999999999955444322
Q ss_pred CcccchhHHHHHHhHhhcCCceeecCHHHHHHHHH--HcCCceeEEEe--eCcEEEEEEecC
Q 026688 175 PFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR--ACGLVDFKCTR--NRGFVMFTATKP 232 (235)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~Gf~~~~~~~--~~~~~~~~~~k~ 232 (235)
...+.+.++++ ++||..+.+.. .+...+++++|+
T Consensus 168 ------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 168 ------------------------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp ------------------------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEEC
T ss_pred ------------------------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEc
Confidence 24567888888 89997766643 334455666654
No 120
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.78 E-value=3.2e-18 Score=130.84 Aligned_cols=149 Identities=14% Similarity=0.050 Sum_probs=109.4
Q ss_pred CCCeEEEecCCC--chHHHHH-HHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC----C--CC
Q 026688 61 LGGNIIDASCGS--GLFSRIF-AKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----A--SS 131 (235)
Q Consensus 61 ~~~~vLdiG~G~--G~~~~~l-~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~----~--~~ 131 (235)
...+|||+|||+ +.++..+ .+..|.++|+++|.|+.|++.|++++...+ ..++.++++|+.+.+. + ..
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~---~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP---EGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS---SSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC---CCcEEEEEecccChhhhhccccccc
Confidence 457999999997 4344444 445678899999999999999999886532 3469999999987420 1 23
Q ss_pred cee-----EEEecccccccCCh---HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHH
Q 026688 132 SID-----AVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 132 ~~D-----~i~~~~~l~~~~~~---~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
.|| .|+++.+|||+++. ..+++++.+.|+|||+|++++...+.. ......+...+........+++.++
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~---p~~~~~~~~~~~~~g~p~~~rs~~e 231 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFA---PQEVGRVAREYAARNMPMRLRTHAE 231 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTS---HHHHHHHHHHHHHTTCCCCCCCHHH
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCC---HHHHHHHHHHHHhcCCCCccCCHHH
Confidence 455 68899999999884 579999999999999999998876421 1122333333333334467889999
Q ss_pred HHHHHHHcCCceeE
Q 026688 204 IEDLCRACGLVDFK 217 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~ 217 (235)
+..+|. ||++++
T Consensus 232 i~~~f~--Glelve 243 (277)
T 3giw_A 232 AEEFFE--GLELVE 243 (277)
T ss_dssp HHHTTT--TSEECT
T ss_pred HHHHhC--CCcccC
Confidence 999995 998543
No 121
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.78 E-value=5.9e-18 Score=126.71 Aligned_cols=107 Identities=17% Similarity=0.132 Sum_probs=89.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC--CCCCceeEEEe
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 138 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~i~~ 138 (235)
++.+|||+|||+|.++..+++..|...++|+|+|+.+++.|++++...+ ..++.++++|+.+++ ++.++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~---~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSE---AQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSC---CSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 4679999999999999999999888899999999999999999987765 357999999998764 56788999987
Q ss_pred cccccccCC--------hHHHHHHHHHhccCCcEEEEEEe
Q 026688 139 GAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 139 ~~~l~~~~~--------~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+... ...+++++.++|+|||.+++.+.
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 654332221 25789999999999999998764
No 122
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.77 E-value=1.1e-17 Score=129.26 Aligned_cols=109 Identities=10% Similarity=0.057 Sum_probs=91.8
Q ss_pred hhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCcee
Q 026688 55 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 134 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 134 (235)
.++...++.+|||||||+|.++..++.+.+.++|+++|+|+.+++.|++++...+. .++++.++|+.+++ .++||
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l~--d~~FD 190 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVID--GLEFD 190 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGGG--GCCCS
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhCC--CCCcC
Confidence 45667779999999999998776555554567999999999999999999887653 58999999998865 68899
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+|++... .++..++++++.++|+|||.+++....
T Consensus 191 vV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 191 VLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp EEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 9998654 467889999999999999999987643
No 123
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.77 E-value=1.8e-17 Score=123.72 Aligned_cols=144 Identities=14% Similarity=0.068 Sum_probs=100.3
Q ss_pred CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC----CCCCCce
Q 026688 58 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----PFASSSI 133 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~ 133 (235)
...++.+|||+|||+|..+..+++..+..+|+|+|+|+.+++.+.+.... ..++.++.+|+... ++. ++|
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-----~~~v~~~~~d~~~~~~~~~~~-~~f 127 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-----RNNIIPLLFDASKPWKYSGIV-EKV 127 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-----CSSEEEECSCTTCGGGTTTTC-CCE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-----CCCeEEEEcCCCCchhhcccc-cce
Confidence 44567899999999999999999886556999999999988766665543 23688888888763 343 789
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHH----HHHH
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE----DLCR 209 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~ 209 (235)
|+|++.. ..+ .+...+++++.++|||||.+++....... ....+++++. +.++
T Consensus 128 D~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~~---------------------~~~~~~~~~~~~~~~~l~ 184 (210)
T 1nt2_A 128 DLIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMVKARSI---------------------DSTAEPEEVFKSVLKEME 184 (210)
T ss_dssp EEEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEEEHHHH---------------------CTTSCHHHHHHHHHHHHH
T ss_pred eEEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCCc---------------------cccCCHHHHHHHHHHHHH
Confidence 9999873 221 22334589999999999999998543200 0012333332 2378
Q ss_pred HcCCceeEEEeeC----cEEEEEEec
Q 026688 210 ACGLVDFKCTRNR----GFVMFTATK 231 (235)
Q Consensus 210 ~~Gf~~~~~~~~~----~~~~~~~~k 231 (235)
++ |++++..... ...+++++|
T Consensus 185 ~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 185 GD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp TT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred hh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 88 9988887552 345666664
No 124
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.77 E-value=8.2e-18 Score=123.15 Aligned_cols=108 Identities=19% Similarity=0.154 Sum_probs=84.4
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-CCCCceeEEEe
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVHA 138 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~i~~ 138 (235)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++...+ ..++++.+.+...++ +..++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLG---IENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHT---CCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 34789999999999999999988 4599999999999999999988765 257899888777643 34678999998
Q ss_pred cc-cccc--------cCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 139 GA-AIHC--------WSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 139 ~~-~l~~--------~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
+. .+++ ..+...+++++.++|+|||.+++..+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 73 2222 1223477899999999999999987654
No 125
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.77 E-value=1.1e-17 Score=132.38 Aligned_cols=153 Identities=18% Similarity=0.170 Sum_probs=112.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCC----CCCCCeeEEecccccCC----CC--C
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN----FPKENFLLVRADISRLP----FA--S 130 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----~~~~~~~~~~~d~~~~~----~~--~ 130 (235)
++.+|||+|||+|.++..+++. +..+++++|+|+.+++.++++....+. ....++.+.++|+...+ ++ .
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4789999999999999999875 356999999999999999998765310 00336899999998865 43 3
Q ss_pred CceeEEEeccccccc-CC---hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHh-------------H----
Q 026688 131 SSIDAVHAGAAIHCW-SS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN-------------M---- 189 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~-~~---~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~-------------~---- 189 (235)
++||+|++..++|++ .+ +..+++++.++|+|||.+++.++..+. +...+... +
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~------l~~~~~~~~~~~~~~~~~~~~f~~~~ 186 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFE------LIRRLEASETESFGNEIYTVKFQKKG 186 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH------HHHHHTTSSSSEEECSSEEEEESCSS
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHH------HHHHHHhhccCccCCeeEEEEeCCCC
Confidence 589999999999887 44 358999999999999999999886421 00100000 0
Q ss_pred --------------hhcCCceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 190 --------------MQISGSYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 190 --------------~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
..........+.+++.+++++.||+++....
T Consensus 187 ~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~ 231 (313)
T 3bgv_A 187 DYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKT 231 (313)
T ss_dssp CCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEE
T ss_pred CCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecC
Confidence 0000112346789999999999999887763
No 126
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.77 E-value=2.6e-18 Score=127.12 Aligned_cols=111 Identities=14% Similarity=0.227 Sum_probs=90.6
Q ss_pred CCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-CCCCceeEEE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVH 137 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~i~ 137 (235)
.++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...+. ..++++.++|+.+.+ ...++||+|+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL--IDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC--GGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHhhhccCCceEEE
Confidence 447899999999999999999873 556999999999999999999887653 357999999998764 4557899999
Q ss_pred ecccccc------cC---ChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 138 AGAAIHC------WS---SPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 138 ~~~~l~~------~~---~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
++..+.. .. +...+++++.++|+|||.+++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 8865511 11 23478999999999999999988654
No 127
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.76 E-value=6.6e-18 Score=124.14 Aligned_cols=126 Identities=16% Similarity=0.124 Sum_probs=100.8
Q ss_pred CCCHHHHHHHHhhcCC---CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe
Q 026688 44 PGPEKEFELMKGYLKP---VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 120 (235)
|......+.+.+.+.. .++.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.+++++...+. .++++.+
T Consensus 24 p~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~ 99 (189)
T 3p9n_A 24 PTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGL---SGATLRR 99 (189)
T ss_dssp --CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTC---SCEEEEE
T ss_pred cCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCC---CceEEEE
Confidence 4456666666665532 457899999999999999887764 35899999999999999999887652 4799999
Q ss_pred cccccCC--CCCCceeEEEeccccccc-CChHHHHHHHHH--hccCCcEEEEEEeccC
Q 026688 121 ADISRLP--FASSSIDAVHAGAAIHCW-SSPSTGVAEISR--VLRPGGVFVGTTYIVD 173 (235)
Q Consensus 121 ~d~~~~~--~~~~~~D~i~~~~~l~~~-~~~~~~l~~~~~--~L~pgG~li~~~~~~~ 173 (235)
+|+.+.+ ++.++||+|+++..+++. .+...+++.+.+ +|+|||.+++......
T Consensus 100 ~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 100 GAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp SCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 9998753 346789999999887764 556789999999 9999999999887653
No 128
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.76 E-value=8.3e-18 Score=125.29 Aligned_cols=115 Identities=17% Similarity=0.155 Sum_probs=93.1
Q ss_pred HHHHHHHHhhcCCC---CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 47 EKEFELMKGYLKPV---LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 47 ~~~~~~i~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
....+.+.+.+... ++.+|||+|||+|..+..+++..+..+++++|+++.+++.+++++...+ ..++++...|+
T Consensus 48 ~~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~ 124 (207)
T 1jsx_A 48 EMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELK---LENIEPVQSRV 124 (207)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTT---CSSEEEEECCT
T ss_pred HHHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEecch
Confidence 34455555544321 3689999999999999999998777899999999999999999987765 33599999999
Q ss_pred ccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 124 SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.+.+ +.++||+|++.. +.+...+++.+.++|+|||.+++..
T Consensus 125 ~~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 125 EEFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp TTSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred hhCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 8765 457899999754 3556789999999999999999864
No 129
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.76 E-value=1.8e-17 Score=128.95 Aligned_cols=140 Identities=20% Similarity=0.214 Sum_probs=111.8
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
.......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|++++...+. ..++++...|+.
T Consensus 97 ~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~ 174 (277)
T 1o54_A 97 YPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL--IERVTIKVRDIS 174 (277)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC--GGGEEEECCCGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHH
Confidence 4455567777777777899999999999999999998 6677999999999999999999877543 247899999998
Q ss_pred cCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHH
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 204 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (235)
+. ++.++||+|++ +.+++..+++++.++|+|||.+++..+... ...++
T Consensus 175 ~~-~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~--------------------------~~~~~ 222 (277)
T 1o54_A 175 EG-FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTTN--------------------------QVQET 222 (277)
T ss_dssp GC-CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSHH--------------------------HHHHH
T ss_pred Hc-ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--------------------------HHHHH
Confidence 75 45678999997 456778899999999999999999875421 12455
Q ss_pred HHHHHHcCCceeEEE
Q 026688 205 EDLCRACGLVDFKCT 219 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~~ 219 (235)
.+.+++.||..++..
T Consensus 223 ~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 223 LKKLQELPFIRIEVW 237 (277)
T ss_dssp HHHHHHSSEEEEEEE
T ss_pred HHHHHHCCCceeEEE
Confidence 666777888765554
No 130
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.76 E-value=2.4e-18 Score=129.78 Aligned_cols=153 Identities=13% Similarity=0.094 Sum_probs=99.5
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCC-HHHHHHH---HHHhhhcCCCCCCCeeEEecccccCCCC-CCcee
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYS-ENMLKQC---YEFVQQESNFPKENFLLVRADISRLPFA-SSSID 134 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s-~~~~~~a---~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D 134 (235)
.++.+|||||||+|.++..+++..+...|+|+|+| +.+++.| +++....+ ..++.+.++|+..+|.. .+.+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~---~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGG---LSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC---CSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC---CCCeEEEEcCHHHhhhhccCeEE
Confidence 34789999999999999999987778899999999 7777776 66665544 35799999999887521 14455
Q ss_pred EEEecccccc-----cCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCC-ceeecCHHHHHHHH
Q 026688 135 AVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISG-SYTFLSEREIEDLC 208 (235)
Q Consensus 135 ~i~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 208 (235)
.|.++....+ ..+...+++++.++|||||.+++.....+.. ...++.. ...+. ...++..+++...+
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~el~~~l 172 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY-EEAEIKK------RGLPLLSKAYFLSEQYKAEL 172 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC---------------------CCHHHHHSHHHHHHH
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc-hhchhhh------cCCCCCChhhcchHHHHHHH
Confidence 5554432211 1234578999999999999999954433220 0011000 00000 01112233599999
Q ss_pred HHcCCceeEEEeeC
Q 026688 209 RACGLVDFKCTRNR 222 (235)
Q Consensus 209 ~~~Gf~~~~~~~~~ 222 (235)
+++||++......+
T Consensus 173 ~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 173 SNSGFRIDDVKELD 186 (225)
T ss_dssp HHHTCEEEEEEEEC
T ss_pred HHcCCCeeeeeecC
Confidence 99999988776443
No 131
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.76 E-value=7.7e-18 Score=122.34 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=95.1
Q ss_pred cCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC---CCCce
Q 026688 57 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSI 133 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~ 133 (235)
+...++.+|||+|||. +++|+|+.|++.|+++.. .++++.++|+.++++ +.++|
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCE
Confidence 3455689999999986 139999999999998853 248899999998776 67899
Q ss_pred eEEEeccccccc-CChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcC
Q 026688 134 DAVHAGAAIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 212 (235)
Q Consensus 134 D~i~~~~~l~~~-~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 212 (235)
|+|++..+++|+ +++.+++++++++|||||.+++..+...... ......+.+++.++|+++|
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD-----------------NNSKVKTASKLCSALTLSG 127 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC-----------------SSSSSCCHHHHHHHHHHTT
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc-----------------cccccCCHHHHHHHHHHCC
Confidence 999999999999 8899999999999999999999665432100 0222357899999999999
Q ss_pred C
Q 026688 213 L 213 (235)
Q Consensus 213 f 213 (235)
|
T Consensus 128 f 128 (176)
T 2ld4_A 128 L 128 (176)
T ss_dssp C
T ss_pred C
Confidence 9
No 132
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.76 E-value=2.7e-17 Score=124.82 Aligned_cols=153 Identities=13% Similarity=0.071 Sum_probs=106.6
Q ss_pred hcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc---CCCCCC
Q 026688 56 YLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 131 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~ 131 (235)
.+...++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.+.+..... .++.+..+|+.+ ++...+
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCC
Confidence 4445567899999999999999999873 5569999999999888877766552 478999999987 344467
Q ss_pred ceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHc
Q 026688 132 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 211 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 211 (235)
+||+|++... .......++.++.++|+|||.+++........ ...+. ...+. .+ .++|+++
T Consensus 147 ~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~-~~~~~--------------~~~~~-~~-~~~l~~~ 207 (233)
T 2ipx_A 147 MVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIKANCID-STASA--------------EAVFA-SE-VKKMQQE 207 (233)
T ss_dssp CEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC-SSSCH--------------HHHHH-HH-HHTTGGG
T ss_pred cEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcccccc-cCCCH--------------HHHHH-HH-HHHHHHC
Confidence 8999998544 11112456889999999999999965432100 00000 00111 23 4888999
Q ss_pred CCceeEEEeeCc----EEEEEEecC
Q 026688 212 GLVDFKCTRNRG----FVMFTATKP 232 (235)
Q Consensus 212 Gf~~~~~~~~~~----~~~~~~~k~ 232 (235)
||++++...... ..+++++++
T Consensus 208 Gf~~~~~~~~~~~~~~~~~v~~~~~ 232 (233)
T 2ipx_A 208 NMKPQEQLTLEPYERDHAVVVGVYR 232 (233)
T ss_dssp TEEEEEEEECTTTSSSEEEEEEEEC
T ss_pred CCceEEEEecCCccCCcEEEEEEeC
Confidence 999888654332 566777664
No 133
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.76 E-value=3.5e-17 Score=122.17 Aligned_cols=115 Identities=17% Similarity=0.098 Sum_probs=100.0
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.......+.+.+...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++...+ ..++++..+|..+
T Consensus 62 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~ 136 (210)
T 3lbf_A 62 QPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLKNLD---LHNVSTRHGDGWQ 136 (210)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcC---CCceEEEECCccc
Confidence 55667788888887888999999999999999999985 499999999999999999988765 3479999999988
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
...+.++||+|++..+++|+++ .+.++|+|||.+++....
T Consensus 137 ~~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 137 GWQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CCccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 6555688999999999998875 588999999999998776
No 134
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.75 E-value=6.5e-17 Score=120.91 Aligned_cols=137 Identities=9% Similarity=0.044 Sum_probs=110.3
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
-++.+.+++.+ +.+|||+|||+|.++..+++.++..+|+++|+++.+++.|++++..+++ ..++++..+|..+...
T Consensus 11 RL~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl--~~~I~~~~gD~l~~~~ 86 (230)
T 3lec_A 11 RLQKVANYVPK--GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL--TSKIDVRLANGLSAFE 86 (230)
T ss_dssp HHHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCC--CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECchhhccc
Confidence 34566666765 6899999999999999999998877899999999999999999998875 4579999999987654
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
+.+.||+|+....... -...++....+.|+++|++++.... ..+.++++|
T Consensus 87 ~~~~~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp~~----------------------------~~~~lr~~L 136 (230)
T 3lec_A 87 EADNIDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQPNN----------------------------REDDLRKWL 136 (230)
T ss_dssp GGGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS----------------------------CHHHHHHHH
T ss_pred cccccCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEECCC----------------------------ChHHHHHHH
Confidence 4447999886544331 1246788889999999998876532 357889999
Q ss_pred HHcCCceeEEE
Q 026688 209 RACGLVDFKCT 219 (235)
Q Consensus 209 ~~~Gf~~~~~~ 219 (235)
.++||.+++..
T Consensus 137 ~~~Gf~i~~E~ 147 (230)
T 3lec_A 137 AANDFEIVAED 147 (230)
T ss_dssp HHTTEEEEEEE
T ss_pred HHCCCEEEEEE
Confidence 99999987765
No 135
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.75 E-value=6.9e-17 Score=130.42 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=99.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
....+.+++.+...++.+|||+|||+|.++..+++.+|..+|+++|+|+.+++.+++++..++.....++++...|+.+
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 3445667888877777999999999999999999998888999999999999999999887653212357889999987
Q ss_pred CCCCCceeEEEecccccccCC---h--HHHHHHHHHhccCCcEEEEEEec
Q 026688 127 PFASSSIDAVHAGAAIHCWSS---P--STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~---~--~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+++.++||+|+++..+++... . .++++++.++|+|||.++++...
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 455679999999988876322 2 36899999999999999997644
No 136
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.75 E-value=2.1e-17 Score=126.50 Aligned_cols=117 Identities=12% Similarity=0.081 Sum_probs=89.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
...+.+++.+...++.+|||+|||+|.++..+++++. +|+++|+|+.|++.|++++... .....+...+.....
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPK 105 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc----cceeeeeeccccccc
Confidence 3456777778777789999999999999999999875 9999999999999999987542 112222222220011
Q ss_pred CCCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEec
Q 026688 128 FASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
...++||+|+++.+++|+... ..+++++.++| |||.++++...
T Consensus 106 ~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 106 ELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 124689999999999998644 57899999999 99999998764
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.74 E-value=1.1e-16 Score=124.47 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=109.6
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
.....+.+.+. ++.+|||+|||+|.++..+++.++. +|+|+|+|+.+++.|++++..++. ..++++.++|+.+.+
T Consensus 114 ~~~~~l~~~~~--~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~--~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 114 KERVRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFP 188 (278)
T ss_dssp HHHHHHHHHCC--TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCC
T ss_pred HHHHHHHHhCC--CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECCHHHhc
Confidence 34455555554 3789999999999999999998764 799999999999999999987764 345899999998876
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHH
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 207 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (235)
. .++||+|++... .....+++++.++|+|||.+++.+...... ......+++.+.
T Consensus 189 ~-~~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------------------~~~~~~~~i~~~ 243 (278)
T 2frn_A 189 G-ENIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL--------------------MPREPFETFKRI 243 (278)
T ss_dssp C-CSCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG--------------------TTTTTHHHHHHH
T ss_pred c-cCCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeecccc--------------------ccccHHHHHHHH
Confidence 5 678999998533 334678999999999999999988764210 001245678889
Q ss_pred HHHcCCceeE
Q 026688 208 CRACGLVDFK 217 (235)
Q Consensus 208 l~~~Gf~~~~ 217 (235)
++++|+....
T Consensus 244 ~~~~G~~~~~ 253 (278)
T 2frn_A 244 TKEYGYDVEK 253 (278)
T ss_dssp HHHTTCEEEE
T ss_pred HHHcCCeeEE
Confidence 9999998655
No 138
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.74 E-value=2.3e-16 Score=118.71 Aligned_cols=162 Identities=10% Similarity=0.022 Sum_probs=109.4
Q ss_pred CHHHHHHHHhhcC---CCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec
Q 026688 46 PEKEFELMKGYLK---PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121 (235)
Q Consensus 46 ~~~~~~~i~~~~~---~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 121 (235)
..+....++..+. ..++.+|||+|||+|..+..+++. ++.++|+++|+++.+++...+.... ..++.++.+
T Consensus 58 ~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----r~nv~~i~~ 132 (232)
T 3id6_C 58 RSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----RPNIFPLLA 132 (232)
T ss_dssp TCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----CTTEEEEEC
T ss_pred HHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----cCCeEEEEc
Confidence 4455666666554 677899999999999999999886 5677999999999987655544433 247899999
Q ss_pred ccccCC---CCCCceeEEEecccccccCChHHH-HHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCcee
Q 026688 122 DISRLP---FASSSIDAVHAGAAIHCWSSPSTG-VAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 197 (235)
Q Consensus 122 d~~~~~---~~~~~~D~i~~~~~l~~~~~~~~~-l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (235)
|+.... ...++||+|++.... ++.... ...+.++|||||.++++.......... ...
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~---------------~~~- 193 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTK---------------DPK- 193 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------C---------------CSS-
T ss_pred ccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCC---------------CHH-
Confidence 987532 123689999987554 344444 455666999999999985432100000 000
Q ss_pred ecCHHHHHHHHHHcCCceeEEEeeC----cEEEEEEecC
Q 026688 198 FLSEREIEDLCRACGLVDFKCTRNR----GFVMFTATKP 232 (235)
Q Consensus 198 ~~~~~~~~~~l~~~Gf~~~~~~~~~----~~~~~~~~k~ 232 (235)
-..++....|+++||++++..... ...+++++|+
T Consensus 194 -e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 194 -EIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp -SSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEEC
T ss_pred -HHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEeC
Confidence 012445677888999998887542 3577777764
No 139
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.74 E-value=4e-17 Score=128.45 Aligned_cols=151 Identities=11% Similarity=0.104 Sum_probs=109.6
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc-CCCCCCCeeEEecccccCCC--CCCceeEE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPF--ASSSIDAV 136 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~~~--~~~~~D~i 136 (235)
..+.+|||+|||+|..+..+++..+..+|+++|+|+.+++.|++++... ......++++..+|+.+... +.++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3468999999999999999998766679999999999999999987421 00114589999999977542 36789999
Q ss_pred EecccccccCCh----HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcC
Q 026688 137 HAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 212 (235)
Q Consensus 137 ~~~~~l~~~~~~----~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 212 (235)
++.....+.+.. ..+++++.++|+|||.+++...... . ......++.+.++++|
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~--------~--------------~~~~~~~~~~~l~~~G 231 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW--------L--------------DLELIEKMSRFIRETG 231 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT--------T--------------CHHHHHHHHHHHHHHT
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc--------c--------------chHHHHHHHHHHHhCC
Confidence 997666544332 5889999999999999998754320 0 0123567888999999
Q ss_pred CceeEEEe-------eCcEEEEEEecC
Q 026688 213 LVDFKCTR-------NRGFVMFTATKP 232 (235)
Q Consensus 213 f~~~~~~~-------~~~~~~~~~~k~ 232 (235)
|..+.... .+.+.+++++|.
T Consensus 232 F~~v~~~~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 232 FASVQYALMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp CSEEEEEECCCTTSTTSCCEEEEEESS
T ss_pred CCcEEEEEeecccccCcceEEEEEeCC
Confidence 98877653 234556667763
No 140
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.74 E-value=2.2e-16 Score=119.32 Aligned_cols=160 Identities=11% Similarity=0.088 Sum_probs=112.0
Q ss_pred CHHHHHHHHh---hcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec
Q 026688 46 PEKEFELMKG---YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121 (235)
Q Consensus 46 ~~~~~~~i~~---~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 121 (235)
.......+.. .+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.+++++... .++++.++
T Consensus 55 ~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~ 129 (227)
T 1g8a_A 55 RSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILG 129 (227)
T ss_dssp TCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEEC
T ss_pred chhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEc
Confidence 3455566643 333566889999999999999999987 45569999999999999999887642 47999999
Q ss_pred ccccCC---CCCCceeEEEecccccccCCh-HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCcee
Q 026688 122 DISRLP---FASSSIDAVHAGAAIHCWSSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 197 (235)
Q Consensus 122 d~~~~~---~~~~~~D~i~~~~~l~~~~~~-~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (235)
|+.+.. ...++||+|++... .++. ..+++++.++|+|||.+++........ ...+ ..
T Consensus 130 d~~~~~~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~---------------~~ 190 (227)
T 1g8a_A 130 DATKPEEYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSID-VTKE---------------PE 190 (227)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTC-TTSC---------------HH
T ss_pred cCCCcchhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCC-CCCC---------------hh
Confidence 997632 12358999997654 2233 345999999999999999983322111 0001 01
Q ss_pred ecCHHHHHHHHHHcCCceeEEEeeCc----EEEEEEec
Q 026688 198 FLSEREIEDLCRACGLVDFKCTRNRG----FVMFTATK 231 (235)
Q Consensus 198 ~~~~~~~~~~l~~~Gf~~~~~~~~~~----~~~~~~~k 231 (235)
.+..+++..+ .++ |++++...... ..+++++|
T Consensus 191 ~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 191 QVFREVEREL-SEY-FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp HHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEEEEC
T ss_pred hhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEEEEe
Confidence 2345677776 777 99888765432 56677765
No 141
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=1.3e-16 Score=122.97 Aligned_cols=117 Identities=13% Similarity=0.075 Sum_probs=93.9
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhh---cCCCCCCCeeEEecccccC--
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFPKENFLLVRADISRL-- 126 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~~~~~~~~~~~~d~~~~-- 126 (235)
.+..++...++.+|||+|||+|.++..++++.+..+|+++|+++.+++.|++++.. .+. ..++++++.|+.+.
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l--~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAF--SARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTT--GGGEEEEECCTTCCHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCC--cceEEEEeCCHHHHhh
Confidence 45556666667899999999999999999998778999999999999999999876 543 33699999999876
Q ss_pred -----CCCCCceeEEEeccccccc------------------CChHHHHHHHHHhccCCcEEEEEEe
Q 026688 127 -----PFASSSIDAVHAGAAIHCW------------------SSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 127 -----~~~~~~~D~i~~~~~l~~~------------------~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+++.++||+|+++-.+... .....+++.+.++|+|||.+++...
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 2456789999998433221 2346889999999999999998654
No 142
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.74 E-value=1.5e-17 Score=124.87 Aligned_cols=108 Identities=15% Similarity=0.097 Sum_probs=90.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-C--CCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P--FASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~~D~i~ 137 (235)
...+|||||||+|.++..+++..|...|+|+|+++.+++.|++++...+ ..++.++++|+.+. + ++.++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~---l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEG---LSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTT---CSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 4679999999999999999999988899999999999999999987765 35799999998774 3 5678999999
Q ss_pred ecccccccCCh--------HHHHHHHHHhccCCcEEEEEEec
Q 026688 138 AGAAIHCWSSP--------STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 138 ~~~~l~~~~~~--------~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+++...+.... ..+++++.++|+|||.+++.+..
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 87554433222 15899999999999999998754
No 143
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.73 E-value=7.2e-17 Score=123.46 Aligned_cols=129 Identities=10% Similarity=-0.086 Sum_probs=103.2
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC---CCceeEE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDAV 136 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~D~i 136 (235)
.++.+|||+|||+|..+..++...+..+|+++|+++.+++.+++++...+. .+++++++|+++.+.. .++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccccCCCceEE
Confidence 457899999999999999999988888999999999999999999887763 4699999999886532 3789999
Q ss_pred EecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCcee
Q 026688 137 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDF 216 (235)
Q Consensus 137 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~ 216 (235)
++.. +.+...+++.+.++|+|||.+++...... . -...++...++..||.+.
T Consensus 156 ~s~a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~--------~----------------~e~~~~~~~l~~~G~~~~ 207 (249)
T 3g89_A 156 VARA----VAPLCVLSELLLPFLEVGGAAVAMKGPRV--------E----------------EELAPLPPALERLGGRLG 207 (249)
T ss_dssp EEES----SCCHHHHHHHHGGGEEEEEEEEEEECSCC--------H----------------HHHTTHHHHHHHHTEEEE
T ss_pred EECC----cCCHHHHHHHHHHHcCCCeEEEEEeCCCc--------H----------------HHHHHHHHHHHHcCCeEE
Confidence 9854 34567899999999999999987553210 0 112356677788899877
Q ss_pred EEE
Q 026688 217 KCT 219 (235)
Q Consensus 217 ~~~ 219 (235)
.+.
T Consensus 208 ~~~ 210 (249)
T 3g89_A 208 EVL 210 (249)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 144
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.73 E-value=1.5e-16 Score=123.87 Aligned_cols=120 Identities=18% Similarity=0.220 Sum_probs=101.5
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhc-C-CCCCCCeeEEec
Q 026688 45 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE-S-NFPKENFLLVRA 121 (235)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~-~-~~~~~~~~~~~~ 121 (235)
........+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|++++... + . ..++++...
T Consensus 83 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~--~~~v~~~~~ 160 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP--PDNWRLVVS 160 (280)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC--CTTEEEECS
T ss_pred ecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC--CCcEEEEEC
Confidence 34556677888888777899999999999999999985 55679999999999999999988765 2 2 347999999
Q ss_pred ccccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 122 DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 122 d~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
|+.+.+++.++||+|++ +.+++..+++++.++|+|||.+++..+.
T Consensus 161 d~~~~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 161 DLADSELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CGGGCCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred chHhcCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99887766788999997 4567788999999999999999998765
No 145
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.73 E-value=1.8e-16 Score=118.28 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=107.1
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-CCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF 128 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~ 128 (235)
++.+.+++.. +.+|||+|||+|.++..+++.++..+|+++|+++.+++.|++++..++. ..++++..+|..+ ++.
T Consensus 6 L~~l~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~i~~~~~d~l~~l~~ 81 (225)
T 3kr9_A 6 LELVASFVSQ--GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL--KEKIQVRLANGLAAFEE 81 (225)
T ss_dssp HHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCC--CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECchhhhccc
Confidence 4556666664 6899999999999999999998878999999999999999999998875 4479999999965 331
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
...||+|+....-.. -...++..+.+.|+|+|++++.... ..+.++++|
T Consensus 82 -~~~~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~~----------------------------~~~~vr~~L 130 (225)
T 3kr9_A 82 -TDQVSVITIAGMGGR--LIARILEEGLGKLANVERLILQPNN----------------------------REDDLRIWL 130 (225)
T ss_dssp -GGCCCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEESS----------------------------CHHHHHHHH
T ss_pred -CcCCCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEECCC----------------------------CHHHHHHHH
Confidence 236999987544221 1357889999999999998885432 356788999
Q ss_pred HHcCCceeEEE
Q 026688 209 RACGLVDFKCT 219 (235)
Q Consensus 209 ~~~Gf~~~~~~ 219 (235)
.++||.++...
T Consensus 131 ~~~Gf~i~~e~ 141 (225)
T 3kr9_A 131 QDHGFQIVAES 141 (225)
T ss_dssp HHTTEEEEEEE
T ss_pred HHCCCEEEEEE
Confidence 99999987764
No 146
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.73 E-value=1.3e-16 Score=119.53 Aligned_cols=118 Identities=15% Similarity=0.124 Sum_probs=97.6
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
.......+.+.+...++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.+++++...+ ..++.+...|+.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~ 138 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---YDNVIVIVGDGT 138 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEESCGG
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEECCcc
Confidence 45566777777777778999999999999999999876 44699999999999999999887654 346899999986
Q ss_pred cCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
......++||+|++..+++|++ +++.++|+|||.+++.....
T Consensus 139 ~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 139 LGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred cCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 5322357899999999999876 47899999999999987643
No 147
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.73 E-value=1.3e-16 Score=120.16 Aligned_cols=137 Identities=11% Similarity=0.056 Sum_probs=108.7
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
.++.+.+++.+ +.+|||+|||+|.++..+++.++..+|+++|+++.+++.|++++..++. ..++++..+|..+...
T Consensus 11 RL~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 11 RLEKVASYITK--NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL--TEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHHTTCCS--SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCC
T ss_pred HHHHHHHhCCC--CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEecchhhccC
Confidence 45566777765 6899999999999999999998877899999999999999999988775 4579999999987543
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
+...||+|++...-.. -...++....+.|++++++++.... ..+.++++|
T Consensus 87 ~~~~~D~IviagmGg~--lI~~IL~~~~~~L~~~~~lIlq~~~----------------------------~~~~lr~~L 136 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGGT--LIRTILEEGAAKLAGVTKLILQPNI----------------------------AAWQLREWS 136 (244)
T ss_dssp GGGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS----------------------------CHHHHHHHH
T ss_pred ccccccEEEEeCCchH--HHHHHHHHHHHHhCCCCEEEEEcCC----------------------------ChHHHHHHH
Confidence 3346999986543321 1246788899999999999886532 356789999
Q ss_pred HHcCCceeEEE
Q 026688 209 RACGLVDFKCT 219 (235)
Q Consensus 209 ~~~Gf~~~~~~ 219 (235)
.++||.++...
T Consensus 137 ~~~Gf~i~~E~ 147 (244)
T 3gnl_A 137 EQNNWLITSEA 147 (244)
T ss_dssp HHHTEEEEEEE
T ss_pred HHCCCEEEEEE
Confidence 99999975554
No 148
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.72 E-value=7.8e-17 Score=128.78 Aligned_cols=122 Identities=19% Similarity=0.205 Sum_probs=94.0
Q ss_pred CCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcC-------CC-CCCC
Q 026688 45 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES-------NF-PKEN 115 (235)
Q Consensus 45 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~-------~~-~~~~ 115 (235)
........++..+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.|++++...+ .. ...+
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 34455667777777777899999999999999999987 666799999999999999999887421 00 0247
Q ss_pred eeEEecccccC--CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 116 FLLVRADISRL--PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 116 ~~~~~~d~~~~--~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+++..+|+.+. +++.++||+|++. .+++..+++++.++|+|||.+++..+.
T Consensus 169 v~~~~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 169 VDFIHKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp EEEEESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred eEEEECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99999999875 4556689999974 345556899999999999999987764
No 149
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.72 E-value=2.5e-17 Score=122.20 Aligned_cols=125 Identities=14% Similarity=0.140 Sum_probs=95.1
Q ss_pred CCHHHHHHHHhhcCCC-CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 45 GPEKEFELMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 45 ~~~~~~~~i~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
......+.+.+.+... ++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|++++...+.. ..++++.++|+
T Consensus 36 ~~~~~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~v~~~~~d~ 113 (201)
T 2ift_A 36 TGDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCS-SEQAEVINQSS 113 (201)
T ss_dssp --CHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCC-TTTEEEECSCH
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCC-ccceEEEECCH
Confidence 3445555666555432 478999999999999998777753 58999999999999999998876521 04799999998
Q ss_pred ccCCC--CCCc-eeEEEecccccccCChHHHHHHH--HHhccCCcEEEEEEecc
Q 026688 124 SRLPF--ASSS-IDAVHAGAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 124 ~~~~~--~~~~-~D~i~~~~~l~~~~~~~~~l~~~--~~~L~pgG~li~~~~~~ 172 (235)
.+... +.++ ||+|++...++ ..+...+++.+ .++|+|||.+++.....
T Consensus 114 ~~~~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 114 LDFLKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHHTTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHHHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 76432 3568 99999987744 55566788888 66899999999887654
No 150
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.72 E-value=3.1e-16 Score=126.79 Aligned_cols=118 Identities=19% Similarity=0.233 Sum_probs=96.6
Q ss_pred HHHHHHHhhcC--CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 48 KEFELMKGYLK--PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 48 ~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.+.+.+.+.+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++..++. ++++.+.|+.+
T Consensus 218 ~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~~----~v~~~~~D~~~ 291 (381)
T 3dmg_A 218 LLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANAL----KAQALHSDVDE 291 (381)
T ss_dssp HHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTTC----CCEEEECSTTT
T ss_pred HHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC----CeEEEEcchhh
Confidence 34455544442 33578999999999999999999864 999999999999999999887642 48899999988
Q ss_pred CCCCCCceeEEEecccccc-----cCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 126 LPFASSSIDAVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.+.+.++||+|+++..+++ ..+...+++++.++|+|||.++++...
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 7655689999999988887 334468999999999999999998654
No 151
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.71 E-value=1.3e-16 Score=126.38 Aligned_cols=118 Identities=16% Similarity=0.168 Sum_probs=99.9
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.++ ..+|+++|+|+.+++.|++++...+ ..++++...|+.
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g---~~~v~~~~~d~~ 136 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG---IENVIFVCGDGY 136 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCeEEEECChh
Confidence 346677888888877889999999999999999999876 3679999999999999999987765 346999999998
Q ss_pred cCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
+.+.+.++||+|++..+++|+. +.+.++|+|||.+++.....
T Consensus 137 ~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 137 YGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp GCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCBG
T ss_pred hccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECCC
Confidence 7544457899999999999886 57889999999999976544
No 152
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.71 E-value=1.7e-16 Score=127.03 Aligned_cols=119 Identities=17% Similarity=0.225 Sum_probs=98.8
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
....+.+.+.+...++.+|||+|||+|.++..+++.++..+|+++|+|+.+++.+++++...+. ..++...|+.+.
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~----~~~~~~~d~~~~ 257 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV----EGEVFASNVFSE 257 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC----CCEEEECSTTTT
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC----CCEEEEcccccc
Confidence 3456677777765567899999999999999999998877999999999999999999877542 467788888764
Q ss_pred CCCCCceeEEEecccccc-----cCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 127 PFASSSIDAVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+ .++||+|+++..+++ ..+..++++++.++|+|||.+++....
T Consensus 258 ~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 258 V--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp C--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred c--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 3 578999999998875 234568999999999999999998764
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.71 E-value=3e-16 Score=118.81 Aligned_cols=114 Identities=17% Similarity=0.148 Sum_probs=96.6
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++...+ ++++...|+.+
T Consensus 55 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-----~v~~~~~d~~~ 127 (231)
T 1vbf_A 55 ALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN-----NIKLILGDGTL 127 (231)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS-----SEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC-----CeEEEECCccc
Confidence 45667788888877778999999999999999999987 499999999999999999886532 78999999977
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.....++||+|++..+++|+. .++.++|+|||.+++.....
T Consensus 128 ~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 128 GYEEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred ccccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 332457899999999999876 36899999999999987654
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.71 E-value=7.6e-16 Score=117.87 Aligned_cols=117 Identities=13% Similarity=0.121 Sum_probs=92.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-CCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF 128 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~ 128 (235)
+.+..+....++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. ..++++..+|+.+ ++.
T Consensus 53 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~l~~ 130 (248)
T 3tfw_A 53 QFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPALQSLES 130 (248)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHT
T ss_pred HHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHh
Confidence 3333333444578999999999999999999866 67999999999999999999987664 3479999999876 232
Q ss_pred C--CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 129 A--SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 129 ~--~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
. .++||+|++... ..+...+++++.++|+|||.|++.+...
T Consensus 131 ~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 131 LGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp CCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred cCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 1 348999998653 3344678999999999999999876543
No 155
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.71 E-value=3.3e-17 Score=119.04 Aligned_cols=124 Identities=15% Similarity=0.163 Sum_probs=94.4
Q ss_pred CHHHHHHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 46 PEKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 46 ~~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
.....+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.+++++...+. ..++++...|+.
T Consensus 15 ~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~ 91 (177)
T 2esr_A 15 SDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTKA--ENRFTLLKMEAE 91 (177)
T ss_dssp ---CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTTC--GGGEEEECSCHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcHH
Confidence 3445566666665 4457899999999999999999873 46999999999999999999887653 247999999997
Q ss_pred c-CCCCCCceeEEEecccccccCChHHHHHHHH--HhccCCcEEEEEEeccC
Q 026688 125 R-LPFASSSIDAVHAGAAIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 125 ~-~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~--~~L~pgG~li~~~~~~~ 173 (235)
+ .+...+.||+|+++..++ .......++.+. ++|+|||.+++......
T Consensus 92 ~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 92 RAIDCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHHHHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhHHhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 7 333346799999986653 233456677776 99999999999887653
No 156
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.71 E-value=1.3e-16 Score=127.45 Aligned_cols=112 Identities=19% Similarity=0.311 Sum_probs=93.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
+.+.+.+...++.+|||+|||+|.++..+++.+ ..+|+|+|+++ +++.|++++...+. ..++++..+|+.+.+++.
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKL--EDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCC--CCcEEEEEeeHHHhcCCC
Confidence 455555555668899999999999999999885 35899999997 99999999887654 358999999999888777
Q ss_pred CceeEEEecc---cccccCChHHHHHHHHHhccCCcEEE
Q 026688 131 SSIDAVHAGA---AIHCWSSPSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 131 ~~~D~i~~~~---~l~~~~~~~~~l~~~~~~L~pgG~li 166 (235)
++||+|++.. .+.+..+...++.++.++|+|||.++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999876 45555556789999999999999998
No 157
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.71 E-value=3.3e-16 Score=121.99 Aligned_cols=126 Identities=15% Similarity=0.129 Sum_probs=93.5
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeC-CHHHHHHHHHHhh-----hcCCC--CCCC
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQ-----QESNF--PKEN 115 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~-s~~~~~~a~~~~~-----~~~~~--~~~~ 115 (235)
+....+.+.+.......++.+|||+|||+|.++..+++.+ ..+|+++|+ ++.+++.+++++. ..+.. ...+
T Consensus 62 ~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~ 140 (281)
T 3bzb_A 62 SGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRAS 140 (281)
T ss_dssp CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CC
T ss_pred cHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCC
Confidence 3344566666666544557899999999999999998875 348999999 8999999999883 32210 0026
Q ss_pred eeEEecccccC--CC----CCCceeEEEecccccccCChHHHHHHHHHhcc---C--CcEEEEEEe
Q 026688 116 FLLVRADISRL--PF----ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLR---P--GGVFVGTTY 170 (235)
Q Consensus 116 ~~~~~~d~~~~--~~----~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~---p--gG~li~~~~ 170 (235)
+++...|..+. .+ +.++||+|++..+++|.++...+++.+.++|+ | ||.+++...
T Consensus 141 v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~ 206 (281)
T 3bzb_A 141 PKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFT 206 (281)
T ss_dssp CEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEEC
T ss_pred eEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEE
Confidence 77775554331 11 35789999999999998888999999999999 9 998877543
No 158
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.71 E-value=4.8e-17 Score=130.32 Aligned_cols=125 Identities=11% Similarity=0.047 Sum_probs=99.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhh-------hcCCCCCCCeeEE
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-------QESNFPKENFLLV 119 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~-------~~~~~~~~~~~~~ 119 (235)
...+..+++.+...++.+|||+|||+|..+..++...+..+++|+|+++.+++.|++... ..+.. ..+++++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi 237 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLE 237 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEE
Confidence 455677788888888999999999999999999877554469999999999999987542 22221 2479999
Q ss_pred ecccccCCCCC--CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 120 RADISRLPFAS--SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 120 ~~d~~~~~~~~--~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
++|+.+.++.. ..+|+|+++..++ .++....|.++.++|||||.|++.+....
T Consensus 238 ~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 238 RGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp ECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ECcccCCccccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 99999877543 4799999987664 46677889999999999999999876554
No 159
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.70 E-value=1.9e-16 Score=119.23 Aligned_cols=122 Identities=10% Similarity=0.134 Sum_probs=94.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR- 125 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~- 125 (235)
...+.+...+...++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.|++++...+. ..++++.++|+.+
T Consensus 45 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 45 AKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQDL 122 (221)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHHHH
Confidence 334444444444457899999999999999999864 367999999999999999999887664 3469999999855
Q ss_pred CCC-C----CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 126 LPF-A----SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 126 ~~~-~----~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
++. . .++||+|++....++..+...++..+ ++|+|||.+++.+...
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred HHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 232 1 16899999988777776666777777 9999999999866543
No 160
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.70 E-value=1.1e-16 Score=128.39 Aligned_cols=108 Identities=14% Similarity=0.239 Sum_probs=90.7
Q ss_pred CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
..++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.|++++...+. ..+++++.+|+.+.+++.++||+|++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s~-~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECSS-ISDYAVKIVKANKL--DHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcHH-HHHHHHHHHHHcCC--CCcEEEEECcHHHccCCCCceEEEEE
Confidence 3457899999999999999999984 46999999995 99999999887764 44699999999998887889999998
Q ss_pred ccc---ccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 139 GAA---IHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 139 ~~~---l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
..+ +.+..+...+++.+.++|+|||.++....
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 665 34446778899999999999999985433
No 161
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.70 E-value=1.2e-16 Score=121.19 Aligned_cols=112 Identities=18% Similarity=0.175 Sum_probs=86.4
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc---CCCCCCCeeEEeccccc-CC--CCCCce
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---SNFPKENFLLVRADISR-LP--FASSSI 133 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~~~~~~~~~~~~d~~~-~~--~~~~~~ 133 (235)
.++.+|||||||+|.++..+++..+...++|+|+|+.+++.|++++... ......++.++++|+.+ ++ ++.++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3467899999999999999999988889999999999999999876531 00114579999999986 55 667899
Q ss_pred eEEEecccccccCC--------hHHHHHHHHHhccCCcEEEEEEec
Q 026688 134 DAVHAGAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 134 D~i~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
|.|++.....+... ...+++++.++|+|||.|++.+..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99987544332211 136899999999999999987654
No 162
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.70 E-value=1.3e-16 Score=118.47 Aligned_cols=124 Identities=12% Similarity=0.125 Sum_probs=97.0
Q ss_pred CCCHHHHHHHHhhcCCC-CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc
Q 026688 44 PGPEKEFELMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 122 (235)
|......+.+.+.+... ++.+|||+|||+|.++..+++++. .+|+++|+|+.+++.|++++...+ ..++++.+.|
T Consensus 36 p~~~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~D 111 (202)
T 2fpo_A 36 PTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLK---AGNARVVNSN 111 (202)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSC
T ss_pred CCHHHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEECC
Confidence 44566666776666532 578999999999999998877763 489999999999999999988765 2479999999
Q ss_pred ccc-CCCCCCceeEEEecccccccCChHHHHHHHHH--hccCCcEEEEEEecc
Q 026688 123 ISR-LPFASSSIDAVHAGAAIHCWSSPSTGVAEISR--VLRPGGVFVGTTYIV 172 (235)
Q Consensus 123 ~~~-~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~--~L~pgG~li~~~~~~ 172 (235)
+.+ .+...++||+|++...++ ......+++.+.+ +|+|||.+++.....
T Consensus 112 ~~~~~~~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 112 AMSFLAQKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp HHHHHSSCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred HHHHHhhcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 876 454557899999987744 5566778888866 599999999887654
No 163
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.70 E-value=1.8e-16 Score=116.07 Aligned_cols=126 Identities=19% Similarity=0.182 Sum_probs=99.8
Q ss_pred CCCHHHHHHHHhhcCC-CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc
Q 026688 44 PGPEKEFELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 122 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 122 (235)
|......+.+.+.+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.|++++...+. ..++++..+|
T Consensus 26 p~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d 102 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKE--PEKFEVRKMD 102 (187)
T ss_dssp CCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESC
T ss_pred cCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCC--CcceEEEECc
Confidence 5567777888877743 457899999999999999888854 46999999999999999999877653 2479999999
Q ss_pred cccCC----CCCCceeEEEecccccccCChHHHHHHH--HHhccCCcEEEEEEeccC
Q 026688 123 ISRLP----FASSSIDAVHAGAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 123 ~~~~~----~~~~~~D~i~~~~~l~~~~~~~~~l~~~--~~~L~pgG~li~~~~~~~ 173 (235)
+.+.. .+.++||+|+++..++ ..+....++.+ .++|+|||.+++......
T Consensus 103 ~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 103 ANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 87632 2257899999987744 44566777777 889999999999877653
No 164
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.69 E-value=5.2e-17 Score=117.18 Aligned_cols=122 Identities=16% Similarity=0.191 Sum_probs=96.4
Q ss_pred CCCHHHHHHHHhhcCCC--CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec
Q 026688 44 PGPEKEFELMKGYLKPV--LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 121 (235)
+......+.+.+.+... ++.+|||+|||+|.++..+++.++ .++++|+|+.+++.+++++...+ . ++++.+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~ 95 (171)
T 1ws6_A 22 PSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTG---L-GARVVAL 95 (171)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHT---C-CCEEECS
T ss_pred CCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcC---C-ceEEEec
Confidence 44566666666665431 578999999999999999999887 59999999999999999987764 2 7899999
Q ss_pred ccccC-C-CC--CCceeEEEecccccccCChHHHHHHHH--HhccCCcEEEEEEeccC
Q 026688 122 DISRL-P-FA--SSSIDAVHAGAAIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 122 d~~~~-~-~~--~~~~D~i~~~~~l~~~~~~~~~l~~~~--~~L~pgG~li~~~~~~~ 173 (235)
|+.+. + .+ .++||+|++...++ .+....++.+. ++|+|||.+++......
T Consensus 96 d~~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 96 PVEVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred cHHHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 98763 2 11 24799999987765 45556777777 99999999999887654
No 165
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.69 E-value=2.4e-16 Score=127.59 Aligned_cols=118 Identities=16% Similarity=0.222 Sum_probs=96.6
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+.......++.+|||+|||+|.++..+++.+. .+|+|+|+| .+++.|++++..++. ..+++++++|+.+.++
T Consensus 51 ~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~ 126 (376)
T 3r0q_C 51 YFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANNL--DHIVEVIEGSVEDISL 126 (376)
T ss_dssp HHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTTC--TTTEEEEESCGGGCCC
T ss_pred HHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcCC--CCeEEEEECchhhcCc
Confidence 344555555666789999999999999999999853 499999999 999999999887765 4569999999998876
Q ss_pred CCCceeEEEeccccccc---CChHHHHHHHHHhccCCcEEEEEEec
Q 026688 129 ASSSIDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~---~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+ ++||+|++..+.+++ .....+++.+.++|+|||.+++....
T Consensus 127 ~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 127 P-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp S-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred C-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 6 889999996655544 44678999999999999999875543
No 166
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.69 E-value=8.5e-16 Score=123.58 Aligned_cols=127 Identities=20% Similarity=0.055 Sum_probs=104.3
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe
Q 026688 42 GFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120 (235)
Q Consensus 42 ~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 120 (235)
..+....+...+.......++.+|||+|||+|.++..++... +...++|+|+++.+++.|++++...+. . ++++.+
T Consensus 184 ~a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~--~-~i~~~~ 260 (354)
T 3tma_A 184 RGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL--S-WIRFLR 260 (354)
T ss_dssp SCSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC--T-TCEEEE
T ss_pred CCCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC--C-ceEEEe
Confidence 345566777888888887778999999999999999999976 667999999999999999999988764 2 799999
Q ss_pred cccccCCCCCCceeEEEecccccccCC--------hHHHHHHHHHhccCCcEEEEEEec
Q 026688 121 ADISRLPFASSSIDAVHAGAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 121 ~d~~~~~~~~~~~D~i~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.|+.+++.+.+.||+|+++-.+..... ...+++.+.++|+|||.+++.++.
T Consensus 261 ~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 261 ADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999998766677999999755432211 157899999999999999997654
No 167
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.69 E-value=1.5e-16 Score=120.62 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=95.8
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
....+.+...+...++.+|||+|||+|..+..+++..+..+|+++|+++.+++.|++++...+. ..++++..+|+.+.
T Consensus 57 ~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 57 RLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF--ENQVRIIEGNALEQ 134 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGC
T ss_pred HHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHH
Confidence 3444555555554557899999999999999999977778999999999999999999987654 34899999999764
Q ss_pred -C-CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 127 -P-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 -~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+ ...++||+|++... ..+...+++.+.++|+|||.+++....
T Consensus 135 ~~~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp HHHHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred HHhhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 3 22578999997643 344568899999999999999885543
No 168
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.69 E-value=5.1e-16 Score=122.77 Aligned_cols=123 Identities=20% Similarity=0.180 Sum_probs=95.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
......+...+...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++...+ ..++.+.+.|+..
T Consensus 104 d~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g---~~~v~~~~~D~~~ 180 (315)
T 1ixk_A 104 EASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG---VLNVILFHSSSLH 180 (315)
T ss_dssp CHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT---CCSEEEESSCGGG
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC---CCeEEEEECChhh
Confidence 33444555666777789999999999999999998753 4699999999999999999988765 3479999999988
Q ss_pred CCCCCCceeEEEecc------cccccCCh----------------HHHHHHHHHhccCCcEEEEEEecc
Q 026688 126 LPFASSSIDAVHAGA------AIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~------~l~~~~~~----------------~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.+...+.||+|++.. ++.+.++. ..+++++.++|+|||.+++++.+.
T Consensus 181 ~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 181 IGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp GGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 654456899999842 23322221 478999999999999999988764
No 169
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.68 E-value=2e-16 Score=121.52 Aligned_cols=147 Identities=13% Similarity=0.043 Sum_probs=98.1
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC---CCCC---Ccee
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PFAS---SSID 134 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~---~~~D 134 (235)
++.+|||+|||+|.++..++++.+..+|+++|+|+.+++.|++++...+. ..++++.++|+.+. +++. ++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL--SDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC--CccEEEEEcchhhhhhhhhhcccCCccc
Confidence 46799999999999999998875556999999999999999999887654 34699999997652 3432 5899
Q ss_pred EEEecccccccC---------------ChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCC----c
Q 026688 135 AVHAGAAIHCWS---------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISG----S 195 (235)
Q Consensus 135 ~i~~~~~l~~~~---------------~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 195 (235)
+|+++..+++.. ....++.++.++|+|||.+.+.... ............. .
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~----------~~~~~~~l~~~g~~~~~~ 212 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI----------IHDSLQLKKRLRWYSCML 212 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHHHHH----------HHHHHHHGGGBSCEEEEE
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH----------HHHHHhcccceEEEEECC
Confidence 999986554432 0124567889999999987654321 1111111111110 0
Q ss_pred eeecCHHHHHHHHHHcCCceeEEE
Q 026688 196 YTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 196 ~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
......+++.++++++||..+.+.
T Consensus 213 ~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 213 GKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp SSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred CChhHHHHHHHHHHHcCCCceEEE
Confidence 112233789999999999877654
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.68 E-value=7.4e-16 Score=117.02 Aligned_cols=116 Identities=15% Similarity=0.151 Sum_probs=96.2
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.......+.+.+...++.+|||+|||+|.++..+++..+ .+|+++|+++.+++.+++++...+ ..++.+..+|..
T Consensus 76 ~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~- 150 (235)
T 1jg1_A 76 APHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAG---VKNVHVILGDGS- 150 (235)
T ss_dssp CHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGG-
T ss_pred cHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcC---CCCcEEEECCcc-
Confidence 456677788888777789999999999999999999875 699999999999999999987765 346899999973
Q ss_pred CCCCC-CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 126 LPFAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 126 ~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.+++. ..||+|++..+++++. +++.+.|+|||.+++.....
T Consensus 151 ~~~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 151 KGFPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GCCGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred cCCCCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 23333 4599999999988775 36899999999999988754
No 171
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.68 E-value=5.1e-16 Score=120.97 Aligned_cols=121 Identities=16% Similarity=0.152 Sum_probs=94.2
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
+..+.+.+.+++.+...++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++...+. ..++++.++|+
T Consensus 106 ~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l--~~~v~~~~~D~ 182 (284)
T 1nv8_A 106 PETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV--SDRFFVRKGEF 182 (284)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC--TTSEEEEESST
T ss_pred hhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcc
Confidence 444567777777665334679999999999999999998 778999999999999999999987654 33699999999
Q ss_pred ccCCCCCCce---eEEEeccccc-----------ccC--------ChHHHHHHHH-HhccCCcEEEEEE
Q 026688 124 SRLPFASSSI---DAVHAGAAIH-----------CWS--------SPSTGVAEIS-RVLRPGGVFVGTT 169 (235)
Q Consensus 124 ~~~~~~~~~~---D~i~~~~~l~-----------~~~--------~~~~~l~~~~-~~L~pgG~li~~~ 169 (235)
.+. ++ ++| |+|+++-... |.+ +...+++++. +.|+|||.+++..
T Consensus 183 ~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 183 LEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp TGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred hhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 773 22 578 9999972111 221 1237899999 9999999999854
No 172
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.68 E-value=3.8e-16 Score=117.37 Aligned_cols=118 Identities=12% Similarity=0.075 Sum_probs=92.2
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCC-CCeeEEecccccC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPK-ENFLLVRADISRL 126 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~d~~~~ 126 (235)
.+..+.......+..+|||+|||+|..+..+++.. +.++|+++|+++.+++.|++++...+. . .++++.++|+.+.
T Consensus 44 ~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~~i~~~~gda~~~ 121 (221)
T 3dr5_A 44 LLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY--SPSRVRFLLSRPLDV 121 (221)
T ss_dssp HHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHH
T ss_pred HHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CcCcEEEEEcCHHHH
Confidence 34444444444344599999999999999999875 367999999999999999999987764 3 4799999998764
Q ss_pred -C-CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 127 -P-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 -~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+ ++.++||+|++.... .+...+++++.++|+|||.+++....
T Consensus 122 l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 122 MSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp GGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred HHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 2 335789999986533 34457899999999999999985543
No 173
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.68 E-value=4.1e-15 Score=120.26 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=110.8
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
+....+...+.... ..++.+|||+|||+|.++..++..++..+|+|+|+|+.+++.|++++...+. ..++++.++|+
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl--~~~i~~~~~D~ 277 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGV--LDKIKFIQGDA 277 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTC--GGGCEEEECCG
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECCh
Confidence 44667777777777 6678999999999999999999988766899999999999999999987754 35799999999
Q ss_pred ccCCCCCCceeEEEecccccccC----Ch----HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCc
Q 026688 124 SRLPFASSSIDAVHAGAAIHCWS----SP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGS 195 (235)
Q Consensus 124 ~~~~~~~~~~D~i~~~~~l~~~~----~~----~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (235)
.+++.+.++||+|+++..+.... .. ..+++.+.++| +|.+++...
T Consensus 278 ~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~------------------------- 330 (373)
T 3tm4_A 278 TQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT------------------------- 330 (373)
T ss_dssp GGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------------------
T ss_pred hhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------------------
Confidence 99887778999999975543221 11 46788888888 555555443
Q ss_pred eeecCHHHHHHHHHHcCCceeEEE
Q 026688 196 YTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 196 ~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
+.+.+++.+.+.||+..+..
T Consensus 331 ----~~~~~~~~~~~~G~~~~~~~ 350 (373)
T 3tm4_A 331 ----EKKAIEEAIAENGFEIIHHR 350 (373)
T ss_dssp ----CHHHHHHHHHHTTEEEEEEE
T ss_pred ----CHHHHHHHHHHcCCEEEEEE
Confidence 34667788899999876654
No 174
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.67 E-value=2.3e-15 Score=113.36 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=92.7
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
...+.+..++...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++...+. ..++++..+|+.+.
T Consensus 45 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 45 TQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLALDS 122 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHH
Confidence 3333444443444578999999999999999999866 67999999999999999999987664 34699999999653
Q ss_pred -C-CC---CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 127 -P-FA---SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 127 -~-~~---~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
+ ++ .++||+|++..... ....+++++.++|+|||.+++.....
T Consensus 123 ~~~~~~~~~~~fD~v~~d~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 123 LQQIENEKYEPFDFIFIDADKQ---NNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHHHHHTTCCCCSEEEECSCGG---GHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HHHHHhcCCCCcCEEEEcCCcH---HHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 1 11 15799999875532 34578999999999999988876543
No 175
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.67 E-value=1e-17 Score=127.80 Aligned_cols=154 Identities=16% Similarity=0.114 Sum_probs=111.5
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 47 EKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 47 ~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
....+.+...+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...+. ..++++.++|+.+
T Consensus 63 ~~~~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~ 138 (241)
T 3gdh_A 63 EKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGI--ADKIEFICGDFLL 138 (241)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHH
T ss_pred HHHHHHHHHHhhhccCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC--CcCeEEEECChHH
Confidence 333444444432 2257899999999999999999986 4999999999999999999887653 2479999999988
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHH
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 205 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (235)
.+ +.++||+|+++..+++..+....+.++.++|+|||.+++......... .........+.+++.
T Consensus 139 ~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~~~--------------~~~~lp~~~~~~~~~ 203 (241)
T 3gdh_A 139 LA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRLSKKITNN--------------IVYFLPRNADIDQVA 203 (241)
T ss_dssp HG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHHHHHHCSC--------------EEEEEETTBCHHHHH
T ss_pred hc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHHHHhhCCc--------------eEEECCCCCCHHHHH
Confidence 66 467999999999999888777678889999999998664322110000 000012234667788
Q ss_pred HHHHHcCCceeEEE
Q 026688 206 DLCRACGLVDFKCT 219 (235)
Q Consensus 206 ~~l~~~Gf~~~~~~ 219 (235)
.++...|...+...
T Consensus 204 ~~l~~~g~~~i~~~ 217 (241)
T 3gdh_A 204 SLAGPGGQVEIEQN 217 (241)
T ss_dssp HTTCTTCCEEEEEE
T ss_pred HHhccCCCEEEEeh
Confidence 88887776555443
No 176
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.67 E-value=3.7e-15 Score=113.93 Aligned_cols=116 Identities=12% Similarity=0.076 Sum_probs=96.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
......+...+...++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++....+. ..++++...|+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~ 152 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL--GKNVKFFNVDFKDA 152 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC--CTTEEEECSCTTTS
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC--CCcEEEEEcChhhc
Confidence 445556777777777899999999999999999988 45999999999999999999877653 35789999999874
Q ss_pred CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 127 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
..+.+.||+|++ +.+++..+++++.++|+|||.+++..+.
T Consensus 153 ~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 153 EVPEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CCCTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred ccCCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 424578999997 4567778999999999999999998864
No 177
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.67 E-value=2.2e-17 Score=124.91 Aligned_cols=158 Identities=13% Similarity=0.079 Sum_probs=94.1
Q ss_pred HHHHHhhcCC-CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 50 FELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 50 ~~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
++.+++.+.. ..+.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.++++..........++.+... .. +
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~--~~--~ 99 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVL--AD--F 99 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCG--GG--C
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCH--hH--c
Confidence 3444444443 3467999999999999999999853 499999999999999876432110000011222111 11 1
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
+...+|.+.+..++.++ ..+++++.++|+|||.+++..... .......+...-.......+..+.+++.+++
T Consensus 100 ~~~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~~p~-----~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l 171 (232)
T 3opn_A 100 EQGRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALIKPQ-----FEAGREQVGKNGIIRDPKVHQMTIEKVLKTA 171 (232)
T ss_dssp CSCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECHH-----HHSCHHHHC-CCCCCCHHHHHHHHHHHHHHH
T ss_pred CcCCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEECcc-----cccCHHHhCcCCeecCcchhHHHHHHHHHHH
Confidence 11224555555554443 678999999999999999864110 0000000000000001122345789999999
Q ss_pred HHcCCceeEEEe
Q 026688 209 RACGLVDFKCTR 220 (235)
Q Consensus 209 ~~~Gf~~~~~~~ 220 (235)
+++||++.....
T Consensus 172 ~~aGf~v~~~~~ 183 (232)
T 3opn_A 172 TQLGFSVKGLTF 183 (232)
T ss_dssp HHHTEEEEEEEE
T ss_pred HHCCCEEEEEEE
Confidence 999999887764
No 178
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.67 E-value=1.4e-15 Score=110.15 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=84.4
Q ss_pred CCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC--------CC
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------FA 129 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--------~~ 129 (235)
..++.+|||+|||+|.++..+++. ++..+++++|+++ +++ ..++++...|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 456789999999999999999988 5667999999999 642 236889999998765 56
Q ss_pred CCceeEEEecccccccCCh-----------HHHHHHHHHhccCCcEEEEEEecc
Q 026688 130 SSSIDAVHAGAAIHCWSSP-----------STGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~-----------~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.++||+|++...+++..+. ..+++++.++|+|||.+++..+..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 6899999999888877765 688999999999999999987754
No 179
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.67 E-value=3.1e-16 Score=121.02 Aligned_cols=107 Identities=11% Similarity=0.124 Sum_probs=83.9
Q ss_pred CCCeEEEecCCCch----HHHHHHHcCC----CceEEEEeCCHHHHHHHHHHhhhc----CC------------C---CC
Q 026688 61 LGGNIIDASCGSGL----FSRIFAKSGL----FSLVVALDYSENMLKQCYEFVQQE----SN------------F---PK 113 (235)
Q Consensus 61 ~~~~vLdiG~G~G~----~~~~l~~~~~----~~~v~~~D~s~~~~~~a~~~~~~~----~~------------~---~~ 113 (235)
++.+|||+|||+|. +++.+++..+ ..+|+|+|+|+.+++.|++..-.. +. . ..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 5555666522 358999999999999999864100 00 0 00
Q ss_pred ---------CCeeEEecccccCCCC-CCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEE
Q 026688 114 ---------ENFLLVRADISRLPFA-SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 114 ---------~~~~~~~~d~~~~~~~-~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~ 167 (235)
.++.|.+.|+.+.+++ .+.||+|+|..+++|++++ .++++++.+.|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 2689999999886554 4789999999999999766 6899999999999999987
No 180
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.66 E-value=6.8e-16 Score=122.79 Aligned_cols=112 Identities=19% Similarity=0.280 Sum_probs=90.6
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 131 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 131 (235)
.+.+.....++.+|||+|||+|.++..+++.+ ..+|+|+|++ .+++.|++++..++. ..+++++.+|+.+.+++.+
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~~--~~~i~~~~~d~~~~~~~~~ 104 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNGF--SDKITLLRGKLEDVHLPFP 104 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTTC--TTTEEEEESCTTTSCCSSS
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcCC--CCCEEEEECchhhccCCCC
Confidence 34333333457899999999999999999875 3589999999 599999999887664 4579999999998877778
Q ss_pred ceeEEEeccc---ccccCChHHHHHHHHHhccCCcEEEE
Q 026688 132 SIDAVHAGAA---IHCWSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 132 ~~D~i~~~~~---l~~~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
+||+|++... +.+......++..+.++|+|||.++.
T Consensus 105 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999998754 44445667899999999999999984
No 181
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.66 E-value=7.1e-16 Score=123.67 Aligned_cols=118 Identities=14% Similarity=0.213 Sum_probs=96.3
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
..+.+.+.+...++.+|||+|||+|.++..+++.+ ..+|+++|+|+ +++.|++++...+. ..+++++.+|+.+.++
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~l--~~~v~~~~~d~~~~~~ 113 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEVSL 113 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCC
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcCC--CCcEEEEEcchhhCCC
Confidence 34556666665668899999999999999998874 45999999996 88999998877654 3579999999998765
Q ss_pred CCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEec
Q 026688 129 ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+ ++||+|++..+++|+... ...+.++.++|+|||.+++...+
T Consensus 114 ~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 114 P-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp S-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred C-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 5 689999999888887544 47788999999999999865443
No 182
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.66 E-value=4.6e-16 Score=117.97 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=97.3
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.......+...+...++.+|||+|||+|..+..+++..+..+|+++|+++.+++.|++++...+. ..++.+..+|+.+
T Consensus 39 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 39 DLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDALQ 116 (233)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGGG
T ss_pred CHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHH
Confidence 34445555555555567899999999999999999987777999999999999999999887653 3479999999977
Q ss_pred C-CCC--CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 126 L-PFA--SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 126 ~-~~~--~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
. +.. .+.||+|++..... +...+++.+.++|+|||.+++.+..
T Consensus 117 ~~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 117 LGEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp SHHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred HHHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 4 322 47899999876643 5678999999999999999987543
No 183
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.66 E-value=3e-16 Score=120.28 Aligned_cols=122 Identities=16% Similarity=0.092 Sum_probs=90.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc--CCCceEEEEeCCHHHHHHHHHHhhhc---CCCCCCC-------
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS--GLFSLVVALDYSENMLKQCYEFVQQE---SNFPKEN------- 115 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~~v~~~D~s~~~~~~a~~~~~~~---~~~~~~~------- 115 (235)
+..+.+++.+...++.+|||+|||+|.++..+++. .+..+|+|+|+|+.+++.|++++... +. ..+
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~--~~~~~~~~~~ 115 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL--TARELERREQ 115 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc--cccchhhhhh
Confidence 34455555554445789999999999999999887 55568999999999999999877543 11 001
Q ss_pred ------------------ee-------------EEecccccCCC-----CCCceeEEEecccccccCC---------hHH
Q 026688 116 ------------------FL-------------LVRADISRLPF-----ASSSIDAVHAGAAIHCWSS---------PST 150 (235)
Q Consensus 116 ------------------~~-------------~~~~d~~~~~~-----~~~~~D~i~~~~~l~~~~~---------~~~ 150 (235)
++ +.+.|+.+... ...+||+|+++..+.+..+ ...
T Consensus 116 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~ 195 (250)
T 1o9g_A 116 SERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAG 195 (250)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHH
T ss_pred hhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHH
Confidence 55 89999876321 3358999999876655443 248
Q ss_pred HHHHHHHhccCCcEEEEEEec
Q 026688 151 GVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 151 ~l~~~~~~L~pgG~li~~~~~ 171 (235)
+++++.++|+|||+++++...
T Consensus 196 ~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 196 LLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHHSCTTCEEEEEESS
T ss_pred HHHHHHHhcCCCcEEEEeCcc
Confidence 899999999999999985443
No 184
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.66 E-value=2.7e-16 Score=119.87 Aligned_cols=121 Identities=9% Similarity=0.062 Sum_probs=94.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
....+.+..++...++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.|++++...+. ..++++..+|+.+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~ 123 (242)
T 3r3h_A 46 PEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHHH
T ss_pred HHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHH
Confidence 33444444444444578999999999999999999764 67999999999999999999987764 4589999999976
Q ss_pred C-CCC-----CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 126 L-PFA-----SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 126 ~-~~~-----~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
. +.. .++||+|++... ..+...+++++.++|+|||.|++.+...
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 4 211 478999998654 2344578999999999999999976654
No 185
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.66 E-value=2.2e-15 Score=116.66 Aligned_cols=99 Identities=26% Similarity=0.360 Sum_probs=85.3
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.++.+|||+|||+|.++..+++..+..+++++|+|+.+++.++++. .++.+...|+.+++++.++||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY--------PQVTFCVASSHRLPFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTSCSBCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcchhhCCCCCCceeEEEEe
Confidence 3578999999999999999999865669999999999999998863 36789999998888777899999986
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
.+. ..++++.++|+|||.+++.++...
T Consensus 156 ~~~-------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 156 YAP-------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp SCC-------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCh-------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 553 348999999999999999988754
No 186
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.66 E-value=8.3e-16 Score=119.01 Aligned_cols=154 Identities=13% Similarity=0.056 Sum_probs=99.4
Q ss_pred HHHHHhhcCC-CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCee-EEecccccCC
Q 026688 50 FELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFL-LVRADISRLP 127 (235)
Q Consensus 50 ~~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~d~~~~~ 127 (235)
+..+++.+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+++.|++.+.+. ..++. +...++..++
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~ 143 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAE 143 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCC
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh--------CcccceecccCceecc
Confidence 3344444443 356799999999999999998885 35899999999999885442 22332 2223443322
Q ss_pred ---CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHH
Q 026688 128 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 204 (235)
Q Consensus 128 ---~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (235)
++..+||+|++..+++++ ..++.++.++|+|||.+++....... ........ .. .-.....+....+++
T Consensus 144 ~~~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe--~~~~~~~~--~G-~vrd~~~~~~~~~~v 215 (291)
T 3hp7_A 144 PVDFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALVKPQFE--AGREQIGK--NG-IVRESSIHEKVLETV 215 (291)
T ss_dssp GGGCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGT--SCGGGCC---CC-CCCCHHHHHHHHHHH
T ss_pred hhhCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccc--cChhhcCC--CC-ccCCHHHHHHHHHHH
Confidence 334469999998887754 67899999999999999987422110 00000000 00 000011233567889
Q ss_pred HHHHHHcCCceeEEEe
Q 026688 205 EDLCRACGLVDFKCTR 220 (235)
Q Consensus 205 ~~~l~~~Gf~~~~~~~ 220 (235)
..+++++||.+.....
T Consensus 216 ~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 216 TAFAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCEEEEEEE
Confidence 9999999999877764
No 187
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.66 E-value=2.9e-15 Score=112.59 Aligned_cols=160 Identities=10% Similarity=0.034 Sum_probs=115.7
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.+.+...+++.+.. +.+|||+|||+|-++..+....+.+.|+++|+++.+++.+++++...+ .+..+...|+..
T Consensus 119 lD~fY~~i~~~i~~--p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g----~~~~~~v~D~~~ 192 (281)
T 3lcv_B 119 LDEFYRELFRHLPR--PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN----VPHRTNVADLLE 192 (281)
T ss_dssp HHHHHHHHGGGSCC--CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT----CCEEEEECCTTT
T ss_pred HHHHHHHHHhccCC--CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeeecc
Confidence 44555566666644 789999999999999999998888999999999999999999998764 357889999977
Q ss_pred CCCCCCceeEEEecccccccCChH--HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHH
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
.+ +.+.||++++.-+++|+++.. ..+ ++.+.|+|+|.++- .+... .....+... ..-...
T Consensus 193 ~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVS-fp~ks-l~Grs~gm~--------------~~Y~~~ 254 (281)
T 3lcv_B 193 DR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVT-FPTKS-LGQRSKGMF--------------QNYSQS 254 (281)
T ss_dssp SC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEE-EECC--------CHH--------------HHHHHH
T ss_pred cC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEe-ccchh-hcCCCcchh--------------hHHHHH
Confidence 55 457899999999999997653 444 89999999876654 33321 001111111 123467
Q ss_pred HHHHHHHcCCceeEEEeeCcEEEEEEe
Q 026688 204 IEDLCRACGLVDFKCTRNRGFVMFTAT 230 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~~~~~~~~~~~~ 230 (235)
|++.+.+.|.. ++....+.=.+|+.+
T Consensus 255 ~e~~~~~~g~~-~~~~~~~nEl~y~i~ 280 (281)
T 3lcv_B 255 FESQARERSCR-IQRLEIGNELIYVIQ 280 (281)
T ss_dssp HHHHHHHHTCC-EEEEEETTEEEEEEC
T ss_pred HHHHHHhcCCc-eeeeeecCeeEEEec
Confidence 88889999995 455555554455444
No 188
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.65 E-value=1.1e-15 Score=124.60 Aligned_cols=124 Identities=9% Similarity=-0.042 Sum_probs=95.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHH-------HHHhhhcCCCCCCCeeEE
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQC-------YEFVQQESNFPKENFLLV 119 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a-------~~~~~~~~~~~~~~~~~~ 119 (235)
......+++.+...++.+|||+|||+|.++..+++..+..+|+|+|+++.+++.| ++++...+.. ..++++.
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEE
Confidence 4566777777777778999999999999999999875555899999999999988 7777665421 1478888
Q ss_pred ecccccC--CC--CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 120 RADISRL--PF--ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 120 ~~d~~~~--~~--~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.+|.... ++ ..+.||+|+++.++. .++....++++.+.|+|||.+++.+...
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l~-~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFLF-DEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTTC-CHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred EcCccccccccccccCCCCEEEEeCccc-cccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 8754421 11 236899999876663 4566788999999999999999975443
No 189
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.65 E-value=1e-15 Score=116.99 Aligned_cols=102 Identities=20% Similarity=0.277 Sum_probs=85.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--------CCCCCCCeeEEeccccc-CC--CC
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SNFPKENFLLVRADISR-LP--FA 129 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--------~~~~~~~~~~~~~d~~~-~~--~~ 129 (235)
++.+|||+|||+|.++..+++.++...|+|+|+|+.+++.+++++... + ..++.+.++|+.+ ++ ++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~---~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG---FQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST---TTTEEEEECCTTSCGGGTSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC---CCcEEEEeccHHHHHHHhcc
Confidence 467999999999999999999988789999999999999999887654 3 3579999999976 44 55
Q ss_pred CCceeEEEecccccccCCh-------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 130 SSSIDAVHAGAAIHCWSSP-------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~-------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+.+|.|++. ++++ ..+++++.++|+|||.|++.+.
T Consensus 126 ~~~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 126 KGQLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp TTCEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 6789999853 3333 3789999999999999999653
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.65 E-value=4.9e-15 Score=115.73 Aligned_cols=111 Identities=16% Similarity=0.281 Sum_probs=84.6
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcC--CCCCCCeeEEecccccC-CCCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--NFPKENFLLVRADISRL-PFASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~~~d~~~~-~~~~~~~D~i~ 137 (235)
.+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++...+ ....+++++..+|..+. ....++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 3689999999999999999988666799999999999999999886531 11145899999998764 33457899999
Q ss_pred ecccccccCCh----HHHHHHHHHhccCCcEEEEEEec
Q 026688 138 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 138 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+.......+.. ..+++.+.++|+|||.+++....
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 96554322221 57899999999999999987643
No 191
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.65 E-value=1.9e-15 Score=120.15 Aligned_cols=126 Identities=14% Similarity=0.091 Sum_probs=94.3
Q ss_pred CCCCHHHHHHHHhhcC-CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec
Q 026688 43 FPGPEKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA 121 (235)
Q Consensus 43 ~~~~~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 121 (235)
++......+.+.+.+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|++++..++.. ..++++++.
T Consensus 134 f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~-~~~v~~i~~ 210 (332)
T 2igt_A 134 FPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLE-QAPIRWICE 210 (332)
T ss_dssp CGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCT-TSCEEEECS
T ss_pred chHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCC-ccceEEEEC
Confidence 3444445555666553 33467999999999999999999875 9999999999999999998876541 124899999
Q ss_pred ccccCCC----CCCceeEEEecccc----------cccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 122 DISRLPF----ASSSIDAVHAGAAI----------HCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 122 d~~~~~~----~~~~~D~i~~~~~l----------~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
|+.+... ..++||+|+++-.. ++..+...+++.+.++|+|||.+++....
T Consensus 211 D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 211 DAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp CHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred cHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 9976421 14689999995431 22234468899999999999998776654
No 192
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.64 E-value=5.4e-15 Score=111.51 Aligned_cols=119 Identities=21% Similarity=0.270 Sum_probs=93.3
Q ss_pred HHHHHHHhhcC--CCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCC--CCCCCeeEEecc
Q 026688 48 KEFELMKGYLK--PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESN--FPKENFLLVRAD 122 (235)
Q Consensus 48 ~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d 122 (235)
.....+.+.+. ..++.+|||+|||+|..+..+++. ++..+|+++|+++.+++.+++++...+. ....++.+...|
T Consensus 62 ~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 62 HMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 34445555554 556889999999999999999987 4556999999999999999998876421 002378999999
Q ss_pred cccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 123 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 123 ~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
+...+...+.||+|++...++++ ++++.++|+|||.+++.....
T Consensus 142 ~~~~~~~~~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 142 GRMGYAEEAPYDAIHVGAAAPVV------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp GGGCCGGGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEEEEESCT
T ss_pred cccCcccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEecC
Confidence 98655446789999998888765 468899999999999987653
No 193
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.64 E-value=1.3e-16 Score=135.76 Aligned_cols=106 Identities=17% Similarity=0.239 Sum_probs=88.7
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC--CCCCCceeEEEec
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAG 139 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~i~~~ 139 (235)
+.+|||||||.|.++..+++.+. .|+|+|+++.+++.|+.+....+ ..++++.+.+++++ +...++||+|+|.
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENP---DFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTST---TSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcC---CCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 68999999999999999999986 99999999999999999987654 34799999999886 3456789999999
Q ss_pred ccccccCChH--HHHHHHHHhccCCcEEEEEEecc
Q 026688 140 AAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 140 ~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.+++|++++. ..+..+.+.|+++|..++.....
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 9999999885 33556777888887666655443
No 194
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.64 E-value=8.6e-16 Score=114.64 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=86.3
Q ss_pred CCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-CCCCCceeEEEe
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHA 138 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~i~~ 138 (235)
++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. ..++++..+|..+. +...+ ||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHHHHhccCCC-CCEEEE
Confidence 468999999999999999998865 67999999999999999999876553 34699999999763 43345 999998
Q ss_pred cccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 139 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 139 ~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
... ..+...+++++.++|+|||.+++.+..
T Consensus 133 ~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 133 DCD---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp ETT---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred cCC---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 633 345678999999999999999986543
No 195
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.64 E-value=7e-16 Score=116.29 Aligned_cols=118 Identities=14% Similarity=0.100 Sum_probs=91.6
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-C
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P 127 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~ 127 (235)
.+.+.......++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++...+. ..++++.++|+.+. +
T Consensus 53 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~ 130 (225)
T 3tr6_A 53 AQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAKDTLA 130 (225)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHHHHHH
Confidence 33333333334578999999999999999999865 67999999999999999999987664 34699999998653 2
Q ss_pred -CCC----CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 128 -FAS----SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 128 -~~~----~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
... ++||+|++... ..+...+++.+.++|+|||.+++.+...
T Consensus 131 ~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 131 ELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 111 78999996553 2345678999999999999999876553
No 196
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=6e-15 Score=114.32 Aligned_cols=106 Identities=18% Similarity=0.166 Sum_probs=90.5
Q ss_pred CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
..++.+|||+|||+|.++..+++..+..+|+++|+++.+++.|++++..++ ..++.+.++|+.+.+. .+.||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~---l~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK---LNNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT---CSSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEECChHHcCc-cCCceEEEE
Confidence 345789999999999999999998766799999999999999999998765 3478899999988733 568999998
Q ss_pred cccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 139 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 139 ~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.... +...++..+.+.|+|||.+++.....
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7553 55678999999999999999888764
No 197
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.63 E-value=3.2e-15 Score=116.98 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=86.8
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC--CCCCCceeEEEec
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAG 139 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~D~i~~~ 139 (235)
+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.... ..+++++.+|..+. ..+.++||+|++.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~---~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR---APRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC---TTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC---CCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 359999999999999999998777899999999999999999876432 46899999998764 2345789999986
Q ss_pred ccccccCC----hHHHHHHHHHhccCCcEEEEEEec
Q 026688 140 AAIHCWSS----PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 140 ~~l~~~~~----~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
...+.... ...+++.++++|+|||.+++....
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 54332211 257899999999999999987764
No 198
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.63 E-value=5.5e-15 Score=111.54 Aligned_cols=118 Identities=19% Similarity=0.244 Sum_probs=93.2
Q ss_pred HHHHHHHhhc--CCCCCCeEEEecCCCchHHHHHHHcC-----CCceEEEEeCCHHHHHHHHHHhhhcCC--CCCCCeeE
Q 026688 48 KEFELMKGYL--KPVLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSENMLKQCYEFVQQESN--FPKENFLL 118 (235)
Q Consensus 48 ~~~~~i~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~-----~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~ 118 (235)
.....+.+.+ ...++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++...+. ....++++
T Consensus 65 ~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~ 144 (227)
T 2pbf_A 65 HMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKI 144 (227)
T ss_dssp HHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEE
Confidence 3444555555 35567899999999999999999875 456999999999999999998876531 00137899
Q ss_pred EecccccCC----CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 119 VRADISRLP----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 119 ~~~d~~~~~----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
...|+.+.. ...++||+|++...++++ ++++.++|+|||.+++....
T Consensus 145 ~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 145 IHKNIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EECCGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred EECChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 999998754 445789999999888865 47889999999999998764
No 199
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.62 E-value=2e-15 Score=115.35 Aligned_cols=110 Identities=12% Similarity=0.070 Sum_probs=88.9
Q ss_pred cCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-C-C-----
Q 026688 57 LKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F----- 128 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-~----- 128 (235)
+...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. ..++++..+|+.+. + +
T Consensus 75 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~~~ 152 (247)
T 1sui_A 75 LKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPALPVLDEMIKDEK 152 (247)
T ss_dssp HHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHSGG
T ss_pred HHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHHHHHHhccC
Confidence 3334468999999999999999999865 67999999999999999999887654 35799999998653 2 1
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+.++||+|++... ..+...+++.+.++|+|||.+++....
T Consensus 153 ~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 153 NHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp GTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred CCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 1478999998654 235578899999999999999986543
No 200
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.62 E-value=1.3e-14 Score=112.56 Aligned_cols=109 Identities=14% Similarity=0.117 Sum_probs=86.0
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCCCCeeEEeccccc-CCCCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPKENFLLVRADISR-LPFASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~-~~~~~~~~D~i~ 137 (235)
.+.+|||+|||+|.++..++++.+..+++++|+++.+++.|++++... +. ..++++++.+|..+ ++...++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 468999999999999999998755679999999999999999987542 11 14689999999876 233357899999
Q ss_pred ecccccccCC----hHHHHHHHHHhccCCcEEEEEEe
Q 026688 138 AGAAIHCWSS----PSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 138 ~~~~l~~~~~----~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.......+. ...+++.+.++|+|||.+++...
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9655432221 25789999999999999998753
No 201
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.61 E-value=1.6e-14 Score=119.56 Aligned_cols=123 Identities=18% Similarity=0.194 Sum_probs=97.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
.....+...+...++.+|||+|||+|..+..+++..+. ..|+++|+++.+++.+++++...+ ..++.+.+.|+...
T Consensus 246 ~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~ 322 (450)
T 2yxl_A 246 EASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG---IKIVKPLVKDARKA 322 (450)
T ss_dssp HHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCTTCC
T ss_pred chhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcC---CCcEEEEEcChhhc
Confidence 33445556667777899999999999999999987654 699999999999999999988765 34799999999876
Q ss_pred C--CCCCceeEEEec------ccccccCCh----------------HHHHHHHHHhccCCcEEEEEEeccC
Q 026688 127 P--FASSSIDAVHAG------AAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 127 ~--~~~~~~D~i~~~------~~l~~~~~~----------------~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
+ ++.++||+|++. .++.+.++. ..+++++.++|+|||.+++++.+..
T Consensus 323 ~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 323 PEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp SSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred chhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 5 444789999973 233333332 4689999999999999999987653
No 202
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.61 E-value=3.9e-15 Score=123.71 Aligned_cols=115 Identities=15% Similarity=0.248 Sum_probs=93.7
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
.+.+.+.+...++.+|||+|||+|.++..+++.+ ..+|+++|+|+ +++.|++++...++ ..+++++.+|+.+.+++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~gl--~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTTC--TTTEEEEESCTTTCCCS
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcCC--CCcEEEEECchhhCccC
Confidence 3455555555567899999999999999998853 46999999998 99999998887664 45899999999887654
Q ss_pred CCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEE
Q 026688 130 SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~ 169 (235)
++||+|++...++|+.+. ...+.++.++|+|||.+++..
T Consensus 223 -~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 223 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp -SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred -CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 689999998887877654 467778899999999998644
No 203
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.61 E-value=1.6e-14 Score=107.63 Aligned_cols=157 Identities=9% Similarity=-0.028 Sum_probs=109.2
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
.....+++. .++.+|||+|||+|-++..+. +...|+++|+|+.+++.+++.+... ..+..+...|+...+
T Consensus 95 ~fY~~i~~~---~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~----g~~~~~~v~D~~~~~ 164 (253)
T 3frh_A 95 TLYDFIFSA---ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK----DWDFTFALQDVLCAP 164 (253)
T ss_dssp HHHHHHTSS---CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT----TCEEEEEECCTTTSC
T ss_pred HHHHHHhcC---CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeecccCC
Confidence 334444444 447899999999999999888 5679999999999999999998765 347889999998876
Q ss_pred CCCCceeEEEecccccccCChH-HHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHH
Q 026688 128 FASSSIDAVHAGAAIHCWSSPS-TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 206 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~-~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (235)
++ +.||+|++.-++||+.+.+ ....++.+.|+++|.+ ++.++..-. ...+ .+...-...|++
T Consensus 165 ~~-~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vv-VsfPtksl~-Gr~~--------------gm~~~Y~~~~e~ 227 (253)
T 3frh_A 165 PA-EAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMA-VSFPTRSLG-GRGK--------------GMEANYAAWFEG 227 (253)
T ss_dssp CC-CBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEE-EEEECC--------------------------CHHHHHHH
T ss_pred CC-CCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEE-EEcChHHhc-CCCc--------------chhhHHHHHHHH
Confidence 54 6899999999999886542 3444888899997554 444433210 0000 011122344555
Q ss_pred HHHHcCCceeEEEeeCcEEEEEEecC
Q 026688 207 LCRACGLVDFKCTRNRGFVMFTATKP 232 (235)
Q Consensus 207 ~l~~~Gf~~~~~~~~~~~~~~~~~k~ 232 (235)
.+ ...+.+++...++.=.+++.+|.
T Consensus 228 ~~-~~~~~~~~~~~~~nEl~~~i~~~ 252 (253)
T 3frh_A 228 GL-PAEFEIEDKKTIGTELIYLIKKN 252 (253)
T ss_dssp HS-CTTEEEEEEEEETTEEEEEEEEC
T ss_pred Hh-hccchhhhheecCceEEEEEecC
Confidence 55 45577788888887777777764
No 204
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.61 E-value=4.3e-15 Score=119.25 Aligned_cols=102 Identities=20% Similarity=0.331 Sum_probs=85.8
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec-
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG- 139 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~- 139 (235)
++++|||||||+|.++...++.+. .+|+++|.|+ +++.|++.+..+++ ..+++++.+|++++.++ +++|+|++-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~~--~~~i~~i~~~~~~~~lp-e~~DvivsE~ 157 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNGL--EDRVHVLPGPVETVELP-EQVDAIVSEW 157 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTTC--TTTEEEEESCTTTCCCS-SCEEEEECCC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcCC--CceEEEEeeeeeeecCC-ccccEEEeec
Confidence 478999999999999999888875 4899999986 88999998888876 56899999999988766 689999983
Q ss_pred --ccccccCChHHHHHHHHHhccCCcEEEE
Q 026688 140 --AAIHCWSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 140 --~~l~~~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
..+.+......++....+.|+|||.++-
T Consensus 158 ~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 158 MGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccccchhhhHHHHHHhhCCCCceECC
Confidence 4455445567888888999999999874
No 205
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.61 E-value=2.2e-14 Score=106.15 Aligned_cols=99 Identities=15% Similarity=0.286 Sum_probs=78.2
Q ss_pred CCCCCeEEEecCCCchHHHHHHHcCC--CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC---------
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKSGL--FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------- 127 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 127 (235)
..++.+|||+|||+|.++..++++.+ ..+|+|+|+++.. . ..++.+.++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~---~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P---IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C---CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C---CCCceEEEccccchhhhhhccccc
Confidence 34578999999999999999999876 5799999999831 0 346889999998765
Q ss_pred ----------------CCCCceeEEEecccccccC----Ch-------HHHHHHHHHhccCCcEEEEEEec
Q 026688 128 ----------------FASSSIDAVHAGAAIHCWS----SP-------STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 128 ----------------~~~~~~D~i~~~~~l~~~~----~~-------~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
++.++||+|++...+++.. +. ..+++++.++|+|||.+++..+.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 4567899999988776532 11 13788999999999999987654
No 206
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.61 E-value=4e-15 Score=115.46 Aligned_cols=119 Identities=17% Similarity=0.136 Sum_probs=94.4
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC--
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-- 128 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-- 128 (235)
.+...+...++.+|||+|||+|..+..+++..+. .+|+++|+++.+++.+++++...+ ..++++.+.|+.+.+.
T Consensus 74 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 74 IPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG---VLNTIIINADMRKYKDYL 150 (274)
T ss_dssp HHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCHHHHHHHH
T ss_pred HHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC---CCcEEEEeCChHhcchhh
Confidence 3445556667899999999999999999986544 699999999999999999988765 3479999999987643
Q ss_pred --CCCceeEEEecccc------c------------ccCChHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 129 --ASSSIDAVHAGAAI------H------------CWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 129 --~~~~~D~i~~~~~l------~------------~~~~~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
..+.||+|++...+ . .......+++++.++|+|||.+++++.+..
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 25689999986322 1 113346889999999999999999987654
No 207
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.61 E-value=1.2e-13 Score=102.76 Aligned_cols=141 Identities=14% Similarity=0.117 Sum_probs=102.2
Q ss_pred CCCCHHHHHHHHhhc---CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEE
Q 026688 43 FPGPEKEFELMKGYL---KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 119 (235)
Q Consensus 43 ~~~~~~~~~~i~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~ 119 (235)
++.+....+.+...+ ...++.+|||+|||+|.++..+++.+. .+++|+|+++.+++.+++++...+. ++++.
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~ 102 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKG----KFKVF 102 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTT----SEEEE
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCC----CEEEE
Confidence 444566655555443 344578999999999999999998853 4799999999999999999876542 78999
Q ss_pred ecccccCCCCCCceeEEEecccccccCC--hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCcee
Q 026688 120 RADISRLPFASSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 197 (235)
Q Consensus 120 ~~d~~~~~~~~~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (235)
++|+.+.+ .+||+|+++..+++... ...+++.+.+++ |+ +++......
T Consensus 103 ~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~-~~~~~~~~~------------------------ 152 (207)
T 1wy7_A 103 IGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DV-VYSIHLAKP------------------------ 152 (207)
T ss_dssp ESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SE-EEEEEECCH------------------------
T ss_pred ECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--Cc-EEEEEeCCc------------------------
Confidence 99998864 48999999988776642 247888898888 44 443331110
Q ss_pred ecCHHHHHHHHHHcCCceeEEE
Q 026688 198 FLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 198 ~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
-+.+.+.+.+++.||+...+.
T Consensus 153 -~~~~~~~~~l~~~g~~~~~~~ 173 (207)
T 1wy7_A 153 -EVRRFIEKFSWEHGFVVTHRL 173 (207)
T ss_dssp -HHHHHHHHHHHHTTEEEEEEE
T ss_pred -CCHHHHHHHHHHCCCeEEEEE
Confidence 123456677888898764443
No 208
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.60 E-value=1.2e-15 Score=115.91 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=84.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHc----CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS----GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
..+.+.+...++.+|||||||+|..+..+++. .+.++|+++|+++.+++.|+. . ..+++++++|+.+.
T Consensus 71 ~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~----~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 71 AVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D----MENITLHQGDCSDL 142 (236)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G----CTTEEEEECCSSCS
T ss_pred HHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c----CCceEEEECcchhH
Confidence 33333333334689999999999999999987 567799999999999888862 1 35799999999874
Q ss_pred ---CCCC-CceeEEEecccccccCChHHHHHHHHH-hccCCcEEEEEEe
Q 026688 127 ---PFAS-SSIDAVHAGAAIHCWSSPSTGVAEISR-VLRPGGVFVGTTY 170 (235)
Q Consensus 127 ---~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~-~L~pgG~li~~~~ 170 (235)
+... .+||+|++... | .+...++.++.+ +|+|||.+++.+.
T Consensus 143 ~~l~~~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 143 TTFEHLREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GGGGGGSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHHHhhccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 4323 37999998665 3 366788999997 9999999998664
No 209
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.60 E-value=2.9e-14 Score=111.73 Aligned_cols=109 Identities=12% Similarity=0.049 Sum_probs=83.4
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhh--cCCCCCCCeeEEeccccc-CCCCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--ESNFPKENFLLVRADISR-LPFASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~~~~~~~~~~~~d~~~-~~~~~~~~D~i~ 137 (235)
.+.+|||+|||+|..+..+++..+..+|+++|+|+.+++.|++++.. .+. ...++++..+|+.+ ++...++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGF-DDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcccc-CCCceEEEECcHHHHHhhCCCCceEEE
Confidence 35899999999999999999886667999999999999999998753 111 13589999999865 333357899999
Q ss_pred ecccccccC-----ChHHHHHHHHHhccCCcEEEEEEe
Q 026688 138 AGAAIHCWS-----SPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 138 ~~~~l~~~~-----~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.....+.. ....+++.+.++|+|||.+++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 854322111 125889999999999999998753
No 210
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.60 E-value=8.1e-14 Score=112.72 Aligned_cols=106 Identities=17% Similarity=0.068 Sum_probs=86.9
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-CCC-CCCceeEEE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF-ASSSIDAVH 137 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~~D~i~ 137 (235)
.++.+|||+| |+|.++..+++.++..+|+++|+++.+++.|++++...+. .+++++.+|+.+ ++. ..++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY---EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC---CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CCEEEEEChhhhhchhhccCCccEEE
Confidence 3578999999 9999999999888767999999999999999999987653 279999999987 553 346899999
Q ss_pred ecccccccCChHHHHHHHHHhccCCcEE-EEEEe
Q 026688 138 AGAAIHCWSSPSTGVAEISRVLRPGGVF-VGTTY 170 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l-i~~~~ 170 (235)
++..++... ...+++++.++|+|||.+ ++...
T Consensus 247 ~~~p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 247 TDPPETLEA-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp ECCCSSHHH-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred ECCCCchHH-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 986654332 468899999999999954 55443
No 211
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.60 E-value=1.8e-14 Score=109.62 Aligned_cols=121 Identities=20% Similarity=0.211 Sum_probs=93.3
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 124 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 124 (235)
.....+.+...+...++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|++++...+. ..++.+..+|+.
T Consensus 45 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~ 122 (239)
T 2hnk_A 45 SPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSAL 122 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHH
T ss_pred CHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHH
Confidence 334445555555445578999999999999999999865 57999999999999999999877653 235899999986
Q ss_pred cC-C--------------CC-C-CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 125 RL-P--------------FA-S-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 125 ~~-~--------------~~-~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+. + ++ . ++||+|++..... +...+++.+.++|+|||.+++....
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEccc
Confidence 52 2 11 1 6899999875433 3457899999999999999987643
No 212
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.60 E-value=2.4e-14 Score=113.04 Aligned_cols=111 Identities=16% Similarity=0.109 Sum_probs=87.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCC--CCCCCeeEEecccccC-CCCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FPKENFLLVRADISRL-PFASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d~~~~-~~~~~~~D~i~ 137 (235)
.+.+|||+|||+|..+..+++..+..+++++|+++.+++.|++++...+. ....++++..+|+.+. +...++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 46899999999999999999886667999999999999999998754110 0135799999999763 33457899999
Q ss_pred ecccccc-cCC------hHHHHHHHHHhccCCcEEEEEEec
Q 026688 138 AGAAIHC-WSS------PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 138 ~~~~l~~-~~~------~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+....+. ... ...+++.+.++|+|||.+++....
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 9766543 111 258899999999999999987543
No 213
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.60 E-value=4.4e-14 Score=108.90 Aligned_cols=137 Identities=15% Similarity=0.141 Sum_probs=106.3
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 49 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 49 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
....+.+.+.+ +.+|||+|||+|.++..+++.+. ++|+++|++|.+++.+++++..++. ..+++++++|..+.+
T Consensus 115 er~ri~~~~~~--g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N~v--~~~v~~~~~D~~~~~- 188 (278)
T 3k6r_A 115 ERVRMAKVAKP--DELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFP- 188 (278)
T ss_dssp HHHHHHHHCCT--TCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCC-
T ss_pred HHHHHHHhcCC--CCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEeCcHHHhc-
Confidence 34556666655 88999999999999999998863 5899999999999999999998876 457999999998865
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
..+.||.|+++.. +....++..+.++|+|||+|.+........ ......+.+++.+
T Consensus 189 ~~~~~D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~--------------------~~~~~~e~i~~~~ 244 (278)
T 3k6r_A 189 GENIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL--------------------MPREPFETFKRIT 244 (278)
T ss_dssp CCSCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG--------------------TTTTTHHHHHHHH
T ss_pred cccCCCEEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeecccc--------------------cchhHHHHHHHHH
Confidence 3578999997532 334578899999999999998876553210 0012346677888
Q ss_pred HHcCCce
Q 026688 209 RACGLVD 215 (235)
Q Consensus 209 ~~~Gf~~ 215 (235)
++.|+.+
T Consensus 245 ~~~g~~v 251 (278)
T 3k6r_A 245 KEYGYDV 251 (278)
T ss_dssp HHTTCEE
T ss_pred HHcCCcE
Confidence 8999875
No 214
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.60 E-value=1.1e-14 Score=110.01 Aligned_cols=118 Identities=19% Similarity=0.305 Sum_probs=91.3
Q ss_pred HHHHHHHHhhc--CCCCCCeEEEecCCCchHHHHHHHcCC------CceEEEEeCCHHHHHHHHHHhhhcCC--CCCCCe
Q 026688 47 EKEFELMKGYL--KPVLGGNIIDASCGSGLFSRIFAKSGL------FSLVVALDYSENMLKQCYEFVQQESN--FPKENF 116 (235)
Q Consensus 47 ~~~~~~i~~~~--~~~~~~~vLdiG~G~G~~~~~l~~~~~------~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~~~ 116 (235)
......+.+.+ ...++.+|||+|||+|.++..+++... ..+|+++|+++.+++.+++++...+. ....++
T Consensus 68 p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 68 PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 34455566666 355678999999999999999988532 25899999999999999998765320 001368
Q ss_pred eEEecccccCCCCC-CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 117 LLVRADISRLPFAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 117 ~~~~~d~~~~~~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
++...|..+ +++. ++||+|++...++++. +++.+.|+|||.+++....
T Consensus 148 ~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 148 LIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEESCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred EEEECCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 999999977 3333 7899999999988764 6789999999999998764
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.59 E-value=5.7e-15 Score=111.88 Aligned_cols=108 Identities=14% Similarity=0.051 Sum_probs=87.0
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC----CCCC--Cc
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----PFAS--SS 132 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~--~~ 132 (235)
.++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++...+. ..++++..+|+.+. +... ++
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3468999999999999999998865 57999999999999999999877653 34699999997542 2222 68
Q ss_pred eeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 133 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 133 ~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
||+|++.... .+...+++++.++|+|||.+++.+...
T Consensus 149 fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 149 FDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred cCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 9999986542 345688999999999999999876543
No 216
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.58 E-value=5.2e-14 Score=111.36 Aligned_cols=110 Identities=13% Similarity=0.123 Sum_probs=85.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCCCCeeEEecccccC-CCCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPKENFLLVRADISRL-PFASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~~-~~~~~~~D~i~ 137 (235)
.+.+|||+|||+|..+..+++..+..+|+++|+|+.+++.|++++... +. ...++++..+|..+. +...++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~-~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGY-EDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGG-GSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 468999999999999999998766679999999999999999987642 11 035799999998663 22357899999
Q ss_pred ecccccccC--C--hHHHHHHHHHhccCCcEEEEEEec
Q 026688 138 AGAAIHCWS--S--PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 138 ~~~~l~~~~--~--~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+......-+ . ...+++.+.++|+|||.+++...+
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 865321111 1 158899999999999999987543
No 217
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.58 E-value=7e-15 Score=111.10 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=91.7
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
...+.+.......++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++...+. ..++++..+|+.+.
T Consensus 56 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 56 EQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHHHH
Confidence 3334444444444578999999999999999998755 57999999999999999999887654 35799999998653
Q ss_pred -C-CCC----CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 127 -P-FAS----SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 -~-~~~----~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+ +.. ++||+|++... ..+...+++.+.++|+|||.+++.+..
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 1 111 68999998654 234468899999999999999986654
No 218
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.57 E-value=8.6e-15 Score=111.23 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=87.6
Q ss_pred cCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-C-C-----
Q 026688 57 LKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F----- 128 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~-~----- 128 (235)
+...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|++++...+. ..++++..+|..+. + +
T Consensus 66 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~~~ 143 (237)
T 3c3y_A 66 LKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAMLALDNLLQGQE 143 (237)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHSTT
T ss_pred HHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhccC
Confidence 3334478999999999999999999865 67999999999999999999887654 34799999998653 2 2
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.++||+|++.... .+...+++.+.++|+|||.+++...
T Consensus 144 ~~~~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 144 SEGSYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp CTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CCCCcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 14789999986432 2346889999999999999988654
No 219
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.57 E-value=4.2e-15 Score=118.86 Aligned_cols=112 Identities=16% Similarity=0.111 Sum_probs=88.2
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCC------CchHHHHHHH-cCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeE
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCG------SGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLL 118 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G------~G~~~~~l~~-~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~ 118 (235)
....++.++..+.. ++.+||||||| +|..+..+++ ..|.++|+|+|+|+.+. .. ..++++
T Consensus 202 y~~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~-----~~rI~f 268 (419)
T 3sso_A 202 FTPHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VD-----ELRIRT 268 (419)
T ss_dssp CHHHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GC-----BTTEEE
T ss_pred HHHHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hc-----CCCcEE
Confidence 45566777666553 36899999999 6666665555 45778999999999872 11 458999
Q ss_pred EecccccCCCC------CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 119 VRADISRLPFA------SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 119 ~~~d~~~~~~~------~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+++|+.++++. .++||+|++.. .+++.+....++++.++|||||.+++.+..
T Consensus 269 v~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 269 IQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99999987765 58999999875 466677789999999999999999998876
No 220
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.57 E-value=2.5e-14 Score=112.70 Aligned_cols=108 Identities=11% Similarity=0.077 Sum_probs=82.6
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCCCCeeEEecccccC-CCCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPKENFLLVRADISRL-PFASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~~-~~~~~~~D~i~ 137 (235)
.+.+|||+|||+|..+..+++..+..+|+++|+++.+++.|++++... +. ...++++..+|+.+. +...++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~-~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGF-SHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGG-GCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhcccc-CCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 368999999999999999998866779999999999999999988642 11 135799999998763 33457899999
Q ss_pred ecccccccCCh----HHHHHHHHHhccCCcEEEEEE
Q 026688 138 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 138 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~li~~~ 169 (235)
+....+..+.. ..+++.+.++|+|||.+++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 86543221111 578999999999999999865
No 221
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.56 E-value=2.2e-14 Score=113.88 Aligned_cols=109 Identities=18% Similarity=0.169 Sum_probs=85.5
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCCCCeeEEecccccC--CCCCCceeE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPKENFLLVRADISRL--PFASSSIDA 135 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~~--~~~~~~~D~ 135 (235)
..+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++... +. ...++++..+|+.+. ..+.++||+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-EDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-CCCcEEEEECCHHHHHHhccCCCccE
Confidence 3468999999999999999998866679999999999999999987642 11 035799999998763 233578999
Q ss_pred EEecccccc--cCC--hHHHHHHHHHhccCCcEEEEEE
Q 026688 136 VHAGAAIHC--WSS--PSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 136 i~~~~~l~~--~~~--~~~~l~~~~~~L~pgG~li~~~ 169 (235)
|++...... ... ...+++.+.++|+|||.+++..
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 998654211 111 2588999999999999999864
No 222
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.56 E-value=2.8e-13 Score=100.15 Aligned_cols=104 Identities=14% Similarity=0.127 Sum_probs=78.4
Q ss_pred CCCHHHHHHHHhhc---CCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe
Q 026688 44 PGPEKEFELMKGYL---KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 120 (235)
Q Consensus 44 ~~~~~~~~~i~~~~---~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 120 (235)
+.+....+.+...+ ...++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.+++++. ++++.+
T Consensus 31 ~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~ 101 (200)
T 1ne2_A 31 PTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNCG--------GVNFMV 101 (200)
T ss_dssp CCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHCT--------TSEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhcC--------CCEEEE
Confidence 33445445554433 34457899999999999999999873 3479999999999999998753 688999
Q ss_pred cccccCCCCCCceeEEEecccccccCCh--HHHHHHHHHhc
Q 026688 121 ADISRLPFASSSIDAVHAGAAIHCWSSP--STGVAEISRVL 159 (235)
Q Consensus 121 ~d~~~~~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L 159 (235)
+|+.+++ ++||+|+++..+++..+. ..+++++.+.+
T Consensus 102 ~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 102 ADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred CcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 9998864 689999999999888653 47889999988
No 223
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.56 E-value=8.5e-14 Score=108.29 Aligned_cols=108 Identities=12% Similarity=0.060 Sum_probs=83.7
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CC------CCCCCeeEEecccccC-CCCCC
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SN------FPKENFLLVRADISRL-PFASS 131 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~------~~~~~~~~~~~d~~~~-~~~~~ 131 (235)
.+.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++ .. +. ....++++..+|..+. +. .+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 4689999999999999999988 6679999999999999999987 32 10 0146899999998653 22 57
Q ss_pred ceeEEEecccccccC--C--hHHHHHHHHHhccCCcEEEEEEec
Q 026688 132 SIDAVHAGAAIHCWS--S--PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~--~--~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
+||+|++....+..+ . ...+++.+.++|+|||.+++....
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 899999865532211 1 257899999999999999987543
No 224
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.56 E-value=1.9e-14 Score=112.24 Aligned_cols=115 Identities=12% Similarity=0.107 Sum_probs=87.8
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++++...+. ..+++++++|+.+
T Consensus 13 d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 13 NPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPV--ASKLQVLVGDVLK 88 (285)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTT--GGGEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCC--CCceEEEEcceec
Confidence 456778888888877789999999999999999999875 999999999999999998865432 2479999999988
Q ss_pred CCCCCCceeEEEecccc-----------cccCChHHHH----HHH--HHhccCCcEEE
Q 026688 126 LPFASSSIDAVHAGAAI-----------HCWSSPSTGV----AEI--SRVLRPGGVFV 166 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l-----------~~~~~~~~~l----~~~--~~~L~pgG~li 166 (235)
.+++ .||+|+++..+ +|.++....+ +++ +++++|||.++
T Consensus 89 ~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 89 TDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7654 79999996443 3333221110 233 36899999653
No 225
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.56 E-value=1e-13 Score=107.98 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=86.4
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCC-CCCCCeeEEecccccC-CCCCCceeEEE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN-FPKENFLLVRADISRL-PFASSSIDAVH 137 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~~~~~d~~~~-~~~~~~~D~i~ 137 (235)
..+.+|||+|||+|..+..+++..+..+++++|+++.+++.|++++...+. ...+++++...|..+. +...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 346899999999999999999887677999999999999999998754210 0135799999998763 22257899999
Q ss_pred ecccccccCCh----HHHHHHHHHhccCCcEEEEEEe
Q 026688 138 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 138 ~~~~l~~~~~~----~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.....+.+.. ..+++.+.++|+|||.+++...
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 86543322221 5889999999999999998754
No 226
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.55 E-value=1.6e-13 Score=105.48 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=81.8
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
.+.+|||+|||+|..+..+++. + .+++++|+++.+++.|++++... +. ..+++++..+|..+.. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~-~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVK-NNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHH-TCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhcccc-CCCeEEEEechHHHHH---hhCCEEEE
Confidence 4689999999999999999988 6 79999999999999999876431 11 1457999999987754 78999997
Q ss_pred cccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 139 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 139 ~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
. ..++..+++.+.++|+|||.+++...
T Consensus 146 d-----~~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 L-----QEPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp S-----SCCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred C-----CCChHHHHHHHHHhcCCCcEEEEEcC
Confidence 5 34666789999999999999998643
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.55 E-value=2.7e-14 Score=112.18 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=85.1
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhh--cCCCCCCCeeEEeccccc-CCCCCCceeEE
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--ESNFPKENFLLVRADISR-LPFASSSIDAV 136 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~~~~~~~~~~~~d~~~-~~~~~~~~D~i 136 (235)
..+.+|||+|||+|..+..++++.+..+++++|+++.+++.|++++.. .+. ...+++++.+|..+ ++...++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~-~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGY-SSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-GCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhccc-CCCcEEEEECcHHHHHhhCCCCceEE
Confidence 346899999999999999999887667999999999999999998764 111 03579999999866 33345789999
Q ss_pred EecccccccCC----hHHHHHHHHHhccCCcEEEEEEec
Q 026688 137 HAGAAIHCWSS----PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 137 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
++....+..+. ...+++++.++|+|||.+++....
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 98654332211 246899999999999999987644
No 228
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.54 E-value=2.5e-13 Score=108.77 Aligned_cols=110 Identities=12% Similarity=0.123 Sum_probs=88.6
Q ss_pred CCCCCCeEEEecCCCchHHHHHHHcCCC-----ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCc
Q 026688 58 KPVLGGNIIDASCGSGLFSRIFAKSGLF-----SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSS 132 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~-----~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 132 (235)
...++.+|||+|||+|.++..+++..+. ..++|+|+++.+++.|+.++...+. ++.+.++|..... ....
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~----~~~i~~~D~l~~~-~~~~ 201 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ----KMTLLHQDGLANL-LVDP 201 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCTTSCC-CCCC
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC----CceEEECCCCCcc-ccCC
Confidence 4445689999999999999998877532 6899999999999999998876542 5789999987633 3578
Q ss_pred eeEEEecccccccCChH------------------HHHHHHHHhccCCcEEEEEEecc
Q 026688 133 IDAVHAGAAIHCWSSPS------------------TGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 133 ~D~i~~~~~l~~~~~~~------------------~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
||+|+++-.+.+++..+ .++.++.+.|+|||.++++.+..
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 99999997766554321 57999999999999999988753
No 229
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.54 E-value=1.5e-13 Score=100.78 Aligned_cols=98 Identities=16% Similarity=0.223 Sum_probs=74.5
Q ss_pred CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC-------C-
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-------S- 130 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~- 130 (235)
..++.+|||+|||+|.++..++++ ...|+|+|+++.. . ..+++++++|+.+.+.. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------E---IAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------C---CTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------c---CCCeEEEEccccCHHHHHHHHHHhhc
Confidence 355789999999999999999988 4599999999741 1 34789999999875411 1
Q ss_pred ---CceeEEEecccccccC----C-------hHHHHHHHHHhccCCcEEEEEEecc
Q 026688 131 ---SSIDAVHAGAAIHCWS----S-------PSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 131 ---~~~D~i~~~~~l~~~~----~-------~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
++||+|++........ + ...+++.+.++|+|||.+++..+..
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 4899999975432111 1 1467889999999999999887654
No 230
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.54 E-value=6.3e-14 Score=115.36 Aligned_cols=123 Identities=20% Similarity=0.193 Sum_probs=98.3
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.......+...+...++.+|||+|||+|..+..+++..+...|+++|+++.+++.+++++...+. ++.+.+.|+.+
T Consensus 231 qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~----~~~~~~~D~~~ 306 (429)
T 1sqg_A 231 QDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM----KATVKQGDGRY 306 (429)
T ss_dssp CCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC----CCEEEECCTTC
T ss_pred eCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC----CeEEEeCchhh
Confidence 34455566667777778999999999999999999988767999999999999999999887643 47889999987
Q ss_pred CC--CCCCceeEEEec------ccccccCCh----------------HHHHHHHHHhccCCcEEEEEEecc
Q 026688 126 LP--FASSSIDAVHAG------AAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 126 ~~--~~~~~~D~i~~~------~~l~~~~~~----------------~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.+ ++.++||+|++. .++.+.++. ..+++++.++|+|||.+++++.+.
T Consensus 307 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp THHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred chhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 65 445789999973 233333332 377999999999999999998765
No 231
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.54 E-value=6.1e-14 Score=115.45 Aligned_cols=119 Identities=20% Similarity=0.189 Sum_probs=93.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-C
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-F 128 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 128 (235)
..+...+...++.+|||+|||+|..+..+++..+ .+.|+++|+++.+++.+++++...+. . +.+.+.|+.+++ .
T Consensus 91 ~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 91 QAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEA 166 (464)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHH
T ss_pred HHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhh
Confidence 3445566677789999999999999999998754 36899999999999999999988763 3 889999987754 2
Q ss_pred CCCceeEEEecc------cccccCCh----------------HHHHHHHHHhccCCcEEEEEEeccC
Q 026688 129 ASSSIDAVHAGA------AIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 129 ~~~~~D~i~~~~------~l~~~~~~----------------~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
..++||+|++.- ++..-++. ..+++++.++|+|||.|++++.+..
T Consensus 167 ~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 167 FGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp HCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred ccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 357899999632 22222221 4689999999999999999887653
No 232
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.53 E-value=1.9e-13 Score=113.52 Aligned_cols=120 Identities=16% Similarity=0.124 Sum_probs=93.5
Q ss_pred HHHHhhcCCC--CCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 51 ELMKGYLKPV--LGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 51 ~~i~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
..+...+... ++.+|||+|||+|..+..+++... ...|+++|+++.+++.+++++...+ ..++.+.+.|+..++
T Consensus 105 ~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g---~~nv~~~~~D~~~~~ 181 (479)
T 2frx_A 105 MLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTHFDGRVFG 181 (479)
T ss_dssp HHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCCSTTHH
T ss_pred HHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCCHHHhh
Confidence 3344555555 789999999999999999998743 4699999999999999999998765 347899999998764
Q ss_pred C-CCCceeEEEec------ccccccCC----------------hHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 128 F-ASSSIDAVHAG------AAIHCWSS----------------PSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 128 ~-~~~~~D~i~~~------~~l~~~~~----------------~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
. ..+.||.|++. .++.+-++ ..++++++.++|||||.|++++.+..
T Consensus 182 ~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 182 AAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp HHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred hhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 3 35789999983 22222222 13678999999999999999988654
No 233
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.51 E-value=4.5e-14 Score=116.10 Aligned_cols=120 Identities=14% Similarity=0.083 Sum_probs=93.0
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-C
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-F 128 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~ 128 (235)
..+...+...++.+|||+|||+|..+..+++..+ ...|+++|+++.+++.+++++...+ ..++.+.+.|...++ .
T Consensus 95 ~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g---~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 95 MIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG---VSNAIVTNHAPAELVPH 171 (456)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT---CSSEEEECCCHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCceEEEeCCHHHhhhh
Confidence 3445566677789999999999999999988643 4699999999999999999998876 347899999987754 2
Q ss_pred CCCceeEEEeccc------ccccCC----------------hHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 129 ASSSIDAVHAGAA------IHCWSS----------------PSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 129 ~~~~~D~i~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
..+.||+|++... +..-++ ...+++++.++|+|||.|+.++.+..
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 3478999997432 111111 12679999999999999999988653
No 234
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.50 E-value=3e-13 Score=109.60 Aligned_cols=106 Identities=14% Similarity=0.034 Sum_probs=82.5
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-CCCCCceeEEEec
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAG 139 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~i~~~ 139 (235)
++.+|||+|||+|.++..+++.+. .|+++|+|+.+++.+++++..++. ...+.+.|+.+. +...+.||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~----~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGL----RVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC----CCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCC----CCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 478999999999999999999875 699999999999999999987754 235668888764 2112349999986
Q ss_pred cccccc---------CChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 140 AAIHCW---------SSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 140 ~~l~~~---------~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.....- .+...++..+.++|+|||.|++.+...
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 443211 122478889999999999999877654
No 235
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.50 E-value=1.7e-13 Score=111.12 Aligned_cols=110 Identities=14% Similarity=0.104 Sum_probs=85.3
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCC-CeeEEecccccC-C-C--CCCcee
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKE-NFLLVRADISRL-P-F--ASSSID 134 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~-~~~~~~~d~~~~-~-~--~~~~~D 134 (235)
.++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.|++++..++. .. +++++++|+.+. + . ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~n~~--~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEANHL--DMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHHTTC--CCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHHhCCCcc
Confidence 3478999999999999999998652 4899999999999999999988764 22 799999998763 2 1 235899
Q ss_pred EEEecccc-----cccCCh----HHHHHHHHHhccCCcEEEEEEecc
Q 026688 135 AVHAGAAI-----HCWSSP----STGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 135 ~i~~~~~l-----~~~~~~----~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
+|++.-.. .+..+. ..+++.+.++|+|||.+++.....
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99986433 223332 356788899999999999887653
No 236
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.48 E-value=3e-13 Score=99.53 Aligned_cols=100 Identities=18% Similarity=0.248 Sum_probs=75.4
Q ss_pred CCCCCeEEEecCCCchHHHHHHHcCCC---------ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEE-ecccccCC-
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKSGLF---------SLVVALDYSENMLKQCYEFVQQESNFPKENFLLV-RADISRLP- 127 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~~~~---------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~d~~~~~- 127 (235)
..++.+|||+|||+|.++..+++..+. .+|+++|+++.. . ..++++. ..|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~---~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------P---LEGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------C---CTTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------c---CCCCeEEEeccCCCHHH
Confidence 345789999999999999999998543 689999999831 0 2367788 88876532
Q ss_pred -------CCCCceeEEEecccccc----cCCh-------HHHHHHHHHhccCCcEEEEEEecc
Q 026688 128 -------FASSSIDAVHAGAAIHC----WSSP-------STGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 128 -------~~~~~~D~i~~~~~l~~----~~~~-------~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
++.++||+|++...++. ..+. ..+++++.++|+|||.+++..+..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 23468999999664443 2222 378999999999999999987643
No 237
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.48 E-value=3.1e-14 Score=110.13 Aligned_cols=113 Identities=19% Similarity=0.154 Sum_probs=79.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEE--ecccccCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV--RADISRLPF 128 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~d~~~~~~ 128 (235)
..+.+.....++.+|||+|||+|.++..++++ .+|+|+|+++ ++..+++....... ...++.+. ++|+..++
T Consensus 72 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~-~~~~v~~~~~~~D~~~l~- 145 (276)
T 2wa2_A 72 AWIDERGGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVET-FGWNLITFKSKVDVTKME- 145 (276)
T ss_dssp HHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCC-TTGGGEEEECSCCGGGCC-
T ss_pred HHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhh-cCCCeEEEeccCcHhhCC-
Confidence 44444433446789999999999999999987 4899999998 54333221100000 01167888 89998865
Q ss_pred CCCceeEEEecccccccCCh----H---HHHHHHHHhccCCc--EEEEEEec
Q 026688 129 ASSSIDAVHAGAAIHCWSSP----S---TGVAEISRVLRPGG--VFVGTTYI 171 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~----~---~~l~~~~~~L~pgG--~li~~~~~ 171 (235)
.++||+|+|..+ ++..++ . .+++.+.++|+||| .+++..+.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999877 444332 1 37899999999999 99987665
No 238
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.48 E-value=4.8e-13 Score=109.07 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=86.6
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCC-CeeEEecccccCCC----CCCceeE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKE-NFLLVRADISRLPF----ASSSIDA 135 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~-~~~~~~~d~~~~~~----~~~~~D~ 135 (235)
++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.|++++..++. .. +++++++|+.+... ...+||+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl--~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKL--DLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--CGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCC--CccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 47899999999999999999975 35899999999999999999987652 03 78999999976421 1468999
Q ss_pred EEecccc---------cccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 136 VHAGAAI---------HCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 136 i~~~~~l---------~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
|++.-.. ........++..+.+.|+|||.+++.....
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9986432 112334578999999999999999987654
No 239
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.47 E-value=5.3e-13 Score=108.83 Aligned_cols=109 Identities=14% Similarity=0.115 Sum_probs=87.1
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC----CCCceeEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 136 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~i 136 (235)
++.+|||+|||+|.++..+++.+ ..+|+++|+++.+++.|++++..++. ..++++.++|+.+... ...+||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGV--EDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC--CccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 47899999999999999999874 34899999999999999999987653 2379999999876421 24689999
Q ss_pred Eecccccc---------cCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 137 HAGAAIHC---------WSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 137 ~~~~~l~~---------~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
++...... ..+...++..+.++|+|||.+++.+.+.
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 98643321 1234578899999999999999988764
No 240
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.47 E-value=3.6e-14 Score=109.20 Aligned_cols=113 Identities=19% Similarity=0.159 Sum_probs=79.8
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhh-cCCCCCCCeeEE--ecccccC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-ESNFPKENFLLV--RADISRL 126 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~~~~~~~~~~--~~d~~~~ 126 (235)
+..+.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++.... ... ..++.+. ++|+.++
T Consensus 63 L~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~--~~~v~~~~~~~D~~~l 136 (265)
T 2oxt_A 63 LAWMEERGYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESY--GWNIVKFKSRVDIHTL 136 (265)
T ss_dssp HHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBT--TGGGEEEECSCCTTTS
T ss_pred HHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhcc--CCCeEEEecccCHhHC
Confidence 344444433456789999999999999999887 4899999998 53322211000 000 1167888 8999886
Q ss_pred CCCCCceeEEEecccccccCCh----H---HHHHHHHHhccCCc--EEEEEEec
Q 026688 127 PFASSSIDAVHAGAAIHCWSSP----S---TGVAEISRVLRPGG--VFVGTTYI 171 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~----~---~~l~~~~~~L~pgG--~li~~~~~ 171 (235)
+ .++||+|+|..+ ++..++ . .+++.+.++|+||| .+++..+.
T Consensus 137 ~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 137 P--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp C--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred C--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 5 578999999877 544443 1 37899999999999 99987765
No 241
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.47 E-value=2.4e-13 Score=110.27 Aligned_cols=107 Identities=20% Similarity=0.187 Sum_probs=85.8
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC----CCCceeEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 136 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~i 136 (235)
++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++..++. .+++++++|+.+... ...+||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~---~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGL---GNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTC---TTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC---CCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 4789999999999999999987 35899999999999999999987763 358999999976421 14689999
Q ss_pred Eeccccccc---------CChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 137 HAGAAIHCW---------SSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 137 ~~~~~l~~~---------~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
++.-..... .....++..+.++|+|||.+++.+...
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 985432211 223478899999999999999987654
No 242
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.47 E-value=1.2e-13 Score=105.18 Aligned_cols=86 Identities=16% Similarity=0.301 Sum_probs=71.4
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++++. +|+++|+|+.+++.+++++.. ..++++.++|+.+
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~ 87 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQ 87 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGG
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHh
Confidence 567778888888877789999999999999999999874 999999999999999998753 3479999999998
Q ss_pred CCCCC-CceeEEEec
Q 026688 126 LPFAS-SSIDAVHAG 139 (235)
Q Consensus 126 ~~~~~-~~~D~i~~~ 139 (235)
.+++. ..| .|+++
T Consensus 88 ~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 88 FKFPKNQSY-KIFGN 101 (244)
T ss_dssp CCCCSSCCC-EEEEE
T ss_pred CCcccCCCe-EEEEe
Confidence 87653 355 44443
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.47 E-value=1.3e-12 Score=104.09 Aligned_cols=107 Identities=14% Similarity=0.154 Sum_probs=86.9
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 131 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 131 (235)
.+...+. ++.+|||+|||+|.++.. ++. ..+|+++|+|+.+++.+++++..++. ..++++.++|+.+.. +
T Consensus 188 ~i~~~~~--~~~~VLDlg~G~G~~~l~-a~~--~~~V~~vD~s~~ai~~a~~n~~~n~l--~~~v~~~~~D~~~~~---~ 257 (336)
T 2yx1_A 188 RIMKKVS--LNDVVVDMFAGVGPFSIA-CKN--AKKIYAIDINPHAIELLKKNIKLNKL--EHKIIPILSDVREVD---V 257 (336)
T ss_dssp HHHHHCC--TTCEEEETTCTTSHHHHH-TTT--SSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGCC---C
T ss_pred HHHHhcC--CCCEEEEccCccCHHHHh-ccC--CCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECChHHhc---C
Confidence 3444443 478999999999999999 773 46999999999999999999988764 347999999998764 7
Q ss_pred ceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 132 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
.||+|++..... ...+++.+.++|+|||.+++.+...
T Consensus 258 ~fD~Vi~dpP~~----~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 258 KGNRVIMNLPKF----AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp CEEEEEECCTTT----GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred CCcEEEECCcHh----HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 899999853211 2378999999999999999988764
No 244
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.46 E-value=2.8e-12 Score=105.63 Aligned_cols=113 Identities=17% Similarity=0.222 Sum_probs=85.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc--
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-- 125 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-- 125 (235)
.+.+.+.+.+...++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++..++. .++++.++|+.+
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~~~~---~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARLNGL---QNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEECCTTSCC
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEECCHHHHh
Confidence 355666677776667899999999999999999884 4999999999999999999887653 479999999977
Q ss_pred --CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 126 --LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 126 --~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.+++.++||+|+++-...-. ..+++.+.+ ++|++.++++.
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEES
T ss_pred hhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEEC
Confidence 23445689999975332211 245555544 68888777643
No 245
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.44 E-value=5.3e-13 Score=115.74 Aligned_cols=108 Identities=15% Similarity=0.149 Sum_probs=87.0
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-CCCCCceeEEEecc
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAGA 140 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~i~~~~ 140 (235)
+.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.+++++..++.. ..+++++++|+.+. +...++||+|++.-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~-~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLT-GRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCC-STTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCC-ccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 78999999999999999998764 46999999999999999999887642 14799999999773 33457899999864
Q ss_pred cc-----------cccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 141 AI-----------HCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 141 ~l-----------~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.. ....+...+++.+.++|+|||.|+++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 32 22233457899999999999999987654
No 246
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.43 E-value=8.3e-13 Score=109.20 Aligned_cols=129 Identities=14% Similarity=0.118 Sum_probs=101.4
Q ss_pred CCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-------------CCceEEEEeCCHHHHHHHHHHhhh
Q 026688 41 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-------------LFSLVVALDYSENMLKQCYEFVQQ 107 (235)
Q Consensus 41 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------------~~~~v~~~D~s~~~~~~a~~~~~~ 107 (235)
+.+..+....+.+.+.+.+.++.+|||+|||+|.++..+++.. ....++|+|+++.+++.|+.++..
T Consensus 151 G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l 230 (445)
T 2okc_A 151 GQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL 230 (445)
T ss_dssp GGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH
Confidence 3455678888899998887778899999999999999887642 235899999999999999998876
Q ss_pred cCCCCCCCeeEEecccccCCCCCCceeEEEecccccccCCh-----------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 108 ESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSP-----------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 108 ~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~l~~~~~~-----------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+.. ..++++.++|....+.. .+||+|+++-.+.+.... ..++.++.+.|+|||++.++.+
T Consensus 231 ~g~~-~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 231 HGIG-TDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp TTCC-SSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCC-cCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 6531 11578899998776543 489999998665543211 3789999999999999999887
Q ss_pred c
Q 026688 171 I 171 (235)
Q Consensus 171 ~ 171 (235)
.
T Consensus 309 ~ 309 (445)
T 2okc_A 309 D 309 (445)
T ss_dssp H
T ss_pred C
Confidence 5
No 247
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.43 E-value=2.2e-12 Score=106.03 Aligned_cols=119 Identities=18% Similarity=0.259 Sum_probs=91.7
Q ss_pred CCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEE
Q 026688 41 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 119 (235)
Q Consensus 41 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~ 119 (235)
+.+..+....+.+.+.+...++.+|||+|||+|.++..++++. +...++|+|+++.+++.| .++++.
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~ 86 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGI 86 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEE
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEE
Confidence 4455578888999998876557799999999999999998864 456999999999888665 268899
Q ss_pred ecccccCCCCCCceeEEEecccccc----------cCCh-------------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 120 RADISRLPFASSSIDAVHAGAAIHC----------WSSP-------------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 120 ~~d~~~~~~~~~~~D~i~~~~~l~~----------~~~~-------------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
++|+.... +.++||+|+++-.+.. +.+. ..+++.+.++|+|||.+++..+
T Consensus 87 ~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 87 LADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp ESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 99998764 3478999999633221 1111 1568899999999999999887
Q ss_pred cc
Q 026688 171 IV 172 (235)
Q Consensus 171 ~~ 172 (235)
..
T Consensus 166 ~~ 167 (421)
T 2ih2_A 166 AT 167 (421)
T ss_dssp GG
T ss_pred hH
Confidence 63
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.41 E-value=1.3e-12 Score=102.42 Aligned_cols=91 Identities=14% Similarity=0.188 Sum_probs=72.4
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.+++++...+ ..++++.++|+.+
T Consensus 27 ~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~---~~~v~~~~~D~~~ 101 (299)
T 2h1r_A 27 NPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEG---YNNLEVYEGDAIK 101 (299)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTT---CCCEEC----CCS
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcC---CCceEEEECchhh
Confidence 456778888888877789999999999999999998754 99999999999999999886543 3479999999988
Q ss_pred CCCCCCceeEEEeccccc
Q 026688 126 LPFASSSIDAVHAGAAIH 143 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~ 143 (235)
.++ .+||+|+++...+
T Consensus 102 ~~~--~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 102 TVF--PKFDVCTANIPYK 117 (299)
T ss_dssp SCC--CCCSEEEEECCGG
T ss_pred CCc--ccCCEEEEcCCcc
Confidence 764 4899999875544
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.41 E-value=2.2e-12 Score=100.39 Aligned_cols=91 Identities=10% Similarity=0.146 Sum_probs=79.2
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+++|+|+.+++.+++++.. ..+++++++|+.+
T Consensus 35 d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~ 107 (295)
T 3gru_A 35 DKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALK 107 (295)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhh
Confidence 567788899988888889999999999999999999854 999999999999999998863 4589999999998
Q ss_pred CCCCCCceeEEEeccccc
Q 026688 126 LPFASSSIDAVHAGAAIH 143 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~ 143 (235)
.+++...||.|+++..++
T Consensus 108 ~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 108 VDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp SCGGGSCCSEEEEECCGG
T ss_pred CCcccCCccEEEEeCccc
Confidence 887777899999875543
No 250
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.40 E-value=2.1e-12 Score=100.13 Aligned_cols=117 Identities=15% Similarity=0.012 Sum_probs=84.1
Q ss_pred CCCCCCeEEEecCCC------chHHHHHHHcCC-CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeE-EecccccCCCC
Q 026688 58 KPVLGGNIIDASCGS------GLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLL-VRADISRLPFA 129 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~------G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~d~~~~~~~ 129 (235)
...++.+|||+|||+ |. ..+++..+ ..+|+|+|+++. + .++++ +++|+.+.+++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v--------~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V--------SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B--------CSSSEEEESCGGGCCCS
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C--------CCCEEEEECccccCCcc
Confidence 455678999999955 65 44454443 579999999997 1 15778 99999887654
Q ss_pred CCceeEEEecccccc-----cCC------hHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceee
Q 026688 130 SSSIDAVHAGAAIHC-----WSS------PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTF 198 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~-----~~~------~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (235)
++||+|+++...+. .+. ...+++++.++|+|||.+++..+...
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~------------------------- 175 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS------------------------- 175 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS-------------------------
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC-------------------------
Confidence 68999999743221 111 13789999999999999999765431
Q ss_pred cCHHHHHHHHHHcCCceeEEE
Q 026688 199 LSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 199 ~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
...++.+++++.||..+...
T Consensus 176 -~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 -WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp -CCHHHHHHHTTEEEEEEEEE
T ss_pred -CHHHHHHHHHHcCCcEEEEE
Confidence 22467788888888776664
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.39 E-value=5.8e-12 Score=102.16 Aligned_cols=129 Identities=12% Similarity=0.020 Sum_probs=97.6
Q ss_pred CCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCC-----------------------------------
Q 026688 41 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF----------------------------------- 85 (235)
Q Consensus 41 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~----------------------------------- 85 (235)
...|..+.+...++......++..|||++||+|.+++.++....+
T Consensus 181 ~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 260 (393)
T 3k0b_A 181 GSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANY 260 (393)
T ss_dssp CSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcc
Confidence 344566778888888888777899999999999999888765432
Q ss_pred ---ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecccccc-cC---ChHHHHHHHHHh
Q 026688 86 ---SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHC-WS---SPSTGVAEISRV 158 (235)
Q Consensus 86 ---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~l~~-~~---~~~~~l~~~~~~ 158 (235)
..|+|+|+++.+++.|++++...+. ..++++.+.|+.+.+.+ .+||+|+++-.+.. +. +...+.+.+.+.
T Consensus 261 ~~~~~V~GvDid~~al~~Ar~Na~~~gl--~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~ 337 (393)
T 3k0b_A 261 DQPLNIIGGDIDARLIEIAKQNAVEAGL--GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIV 337 (393)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTC--TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHH
Confidence 4699999999999999999988765 34699999999987654 58999999844321 21 223455556666
Q ss_pred ccC--CcEEEEEEecc
Q 026688 159 LRP--GGVFVGTTYIV 172 (235)
Q Consensus 159 L~p--gG~li~~~~~~ 172 (235)
|++ ||.+++.+...
T Consensus 338 lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 338 YKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHTCTTCEEEEEECCT
T ss_pred HhcCCCCEEEEEECCH
Confidence 665 88888876643
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.38 E-value=5.6e-12 Score=102.06 Aligned_cols=128 Identities=15% Similarity=0.057 Sum_probs=98.0
Q ss_pred CCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCC-----------------------------------
Q 026688 41 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF----------------------------------- 85 (235)
Q Consensus 41 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~----------------------------------- 85 (235)
...|..+.+...++......++.+|||++||+|.+++.++..+.+
T Consensus 175 ~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 254 (385)
T 3ldu_A 175 NKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDN 254 (385)
T ss_dssp -CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCC
T ss_pred CCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhc
Confidence 344556778888888888778899999999999999988775322
Q ss_pred ---ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecccccc-cC---ChHHHHHHHHHh
Q 026688 86 ---SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHC-WS---SPSTGVAEISRV 158 (235)
Q Consensus 86 ---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~l~~-~~---~~~~~l~~~~~~ 158 (235)
..|+|+|+++.+++.|++++...+. ..++++.+.|+.+.+.+ .+||+|+++-.+.. +. +...+.+.+.+.
T Consensus 255 ~~~~~V~GvDid~~ai~~Ar~Na~~~gl--~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~ 331 (385)
T 3ldu_A 255 ESKFKIYGYDIDEESIDIARENAEIAGV--DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYA 331 (385)
T ss_dssp SCCCCEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHH
Confidence 4799999999999999999987764 34799999999987654 68999999765432 21 224566667677
Q ss_pred ccC--CcEEEEEEec
Q 026688 159 LRP--GGVFVGTTYI 171 (235)
Q Consensus 159 L~p--gG~li~~~~~ 171 (235)
|++ |+.+.+.+..
T Consensus 332 lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 332 FRKLKNWSYYLITSY 346 (385)
T ss_dssp HHTSBSCEEEEEESC
T ss_pred HhhCCCCEEEEEECC
Confidence 776 8888877654
No 253
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.37 E-value=5.5e-15 Score=112.86 Aligned_cols=116 Identities=13% Similarity=0.151 Sum_probs=88.5
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++.. ..++++.++|+.+
T Consensus 14 ~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~ 86 (245)
T 1yub_A 14 SEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQ 86 (245)
T ss_dssp CTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTT
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhh
Confidence 44566788888887778899999999999999999986 4999999999999988876542 3579999999998
Q ss_pred CCCCC-CceeEEEeccc-----------ccccCChHHHH----HHHHHhccCCcEEEEEE
Q 026688 126 LPFAS-SSIDAVHAGAA-----------IHCWSSPSTGV----AEISRVLRPGGVFVGTT 169 (235)
Q Consensus 126 ~~~~~-~~~D~i~~~~~-----------l~~~~~~~~~l----~~~~~~L~pgG~li~~~ 169 (235)
.+++. ++| .|+++.. +.|.......+ +.+.++|+|||.+.+..
T Consensus 87 ~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 87 FQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp TTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 87653 578 6666522 22333344445 67999999999876533
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.37 E-value=1.3e-11 Score=99.71 Aligned_cols=127 Identities=13% Similarity=0.074 Sum_probs=97.8
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCC------------------------------------
Q 026688 42 GFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF------------------------------------ 85 (235)
Q Consensus 42 ~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~------------------------------------ 85 (235)
..|..+.+...++......++..+||.+||+|.+++..+....+
T Consensus 175 ~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 254 (384)
T 3ldg_A 175 GAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYD 254 (384)
T ss_dssp -CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTT
T ss_pred CCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhcc
Confidence 34556778888888888778899999999999999888765332
Q ss_pred --ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecccccc-cCC---hHHHHHHHHHhc
Q 026688 86 --SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHC-WSS---PSTGVAEISRVL 159 (235)
Q Consensus 86 --~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~l~~-~~~---~~~~l~~~~~~L 159 (235)
..++|+|+++.+++.|++++...+. ...+++.+.|+.+.+.+ ..||+|+++--+.. +.+ ...+.+.+.+.|
T Consensus 255 ~~~~v~GvDid~~al~~Ar~Na~~~gl--~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~l 331 (384)
T 3ldg_A 255 IQLDISGFDFDGRMVEIARKNAREVGL--EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETF 331 (384)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHH
Confidence 4699999999999999999988765 34699999999987754 58999999854421 222 245666666677
Q ss_pred cC--CcEEEEEEec
Q 026688 160 RP--GGVFVGTTYI 171 (235)
Q Consensus 160 ~p--gG~li~~~~~ 171 (235)
++ ||.+.+.+..
T Consensus 332 k~~~g~~~~iit~~ 345 (384)
T 3ldg_A 332 APLKTWSQFILTND 345 (384)
T ss_dssp TTCTTSEEEEEESC
T ss_pred hhCCCcEEEEEECC
Confidence 66 8888887764
No 255
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.36 E-value=3.6e-13 Score=105.71 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=73.4
Q ss_pred CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeC----CHHHHHHHHHHhhhcCCCCCCCeeEEec-ccccCCCCCCce
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY----SENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSI 133 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~----s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 133 (235)
..++.+|||+|||+|.++..++++ .+|+++|+ ++.+++... ....+ ..++.+.++ |+..++ .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~~~~---~~~v~~~~~~D~~~l~--~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MSTYG---WNLVRLQSGVDVFFIP--PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CCSTT---GGGEEEECSCCTTTSC--CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hhhcC---CCCeEEEeccccccCC--cCCC
Confidence 345789999999999999999987 38999999 554332110 01000 246888888 887764 4689
Q ss_pred eEEEeccccc---ccCChH---HHHHHHHHhccCCcEEEEEEecc
Q 026688 134 DAVHAGAAIH---CWSSPS---TGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 134 D~i~~~~~l~---~~~~~~---~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
|+|+|...+. +..+.. .++..+.++|+|||.+++..+..
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9999976653 222222 47888999999999999866543
No 256
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.34 E-value=2.3e-11 Score=99.60 Aligned_cols=99 Identities=20% Similarity=0.219 Sum_probs=77.3
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++..++. . +++.++|+.+... .+||+|++.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~ngl---~-v~~~~~d~~~~~~--~~fD~Vv~d 360 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEINNV---D-AEFEVASDREVSV--KGFDTVIVD 360 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC---C-EEEEECCTTTCCC--TTCSEEEEC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChHHcCc--cCCCEEEEc
Confidence 3478999999999999999998754 999999999999999999887653 3 8999999988642 389999985
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
...... ...+++.+. .|+|+|.++++.
T Consensus 361 PPr~g~--~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 361 PPRAGL--HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCTTCS--CHHHHHHHH-HHCCSEEEEEES
T ss_pred CCccch--HHHHHHHHH-hcCCCcEEEEEC
Confidence 432111 124555554 589999988864
No 257
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.31 E-value=1.5e-10 Score=89.40 Aligned_cols=111 Identities=16% Similarity=0.281 Sum_probs=86.9
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCCCCeeEEecccccC-CCCCCceeEEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPKENFLLVRADISRL-PFASSSIDAVH 137 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~~-~~~~~~~D~i~ 137 (235)
.+++||-||.|.|..+..+++..+..+++.+|+++.+++.+++.+... +....++++++..|.... .-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 368999999999999999999877779999999999999999987542 222257899999999764 33457899999
Q ss_pred ecccccccCC----hHHHHHHHHHhccCCcEEEEEEec
Q 026688 138 AGAAIHCWSS----PSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 138 ~~~~l~~~~~----~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
....-..-+. ...+++.+++.|+|||.++.....
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 7543221111 147899999999999999986544
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.29 E-value=2e-11 Score=93.32 Aligned_cols=87 Identities=10% Similarity=0.184 Sum_probs=72.7
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||||||+|.++..+++.+. +|+++|+|+.+++.+++++.. ..+++++++|+.+
T Consensus 14 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 14 DSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQ 86 (255)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHh
Confidence 456778888888888889999999999999999999864 999999999999999998764 3479999999998
Q ss_pred CCCCC----CceeEEEecc
Q 026688 126 LPFAS----SSIDAVHAGA 140 (235)
Q Consensus 126 ~~~~~----~~~D~i~~~~ 140 (235)
.+++. +.|| |+++.
T Consensus 87 ~~~~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 87 FDFSSVKTDKPLR-VVGNL 104 (255)
T ss_dssp CCGGGSCCSSCEE-EEEEC
T ss_pred CCHHHhccCCCeE-EEecC
Confidence 76542 4688 55543
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.27 E-value=2.2e-11 Score=96.49 Aligned_cols=111 Identities=14% Similarity=0.211 Sum_probs=82.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCC--CCC---CCeeEEecccccCCC----CCC
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FPK---ENFLLVRADISRLPF----ASS 131 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~---~~~~~~~~d~~~~~~----~~~ 131 (235)
.+++||++|||+|..+..++++.+ .+|+++|+++.+++.|++++...+. ... .+++++.+|....-- ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 478999999999999999998875 7899999999999999999764210 001 279999999976421 257
Q ss_pred ceeEEEecccc-cccCCh-----HHHHHHH----HHhccCCcEEEEEEecc
Q 026688 132 SIDAVHAGAAI-HCWSSP-----STGVAEI----SRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 132 ~~D~i~~~~~l-~~~~~~-----~~~l~~~----~~~L~pgG~li~~~~~~ 172 (235)
+||+|++...- ..-..+ ..+++.+ .++|+|||.+++.....
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 89999986533 111111 3566666 89999999999876543
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.27 E-value=2.9e-11 Score=97.57 Aligned_cols=114 Identities=13% Similarity=0.153 Sum_probs=85.0
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
..+.+.+.+.+... +.+|||+|||+|.++..+++... +|+++|+++.+++.|++++..++. .+++++++|+.+.
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~ng~---~~v~~~~~d~~~~ 273 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAANHI---DNVQIIRMAAEEF 273 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHTTC---CSEEEECCCSHHH
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcCC---CceEEEECCHHHH
Confidence 34455666666543 57899999999999999988654 999999999999999999987653 4799999998764
Q ss_pred C--CCC--------------CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEecc
Q 026688 127 P--FAS--------------SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 127 ~--~~~--------------~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
. +.. ..||+|++.-.- ..+..++.+.|+++|.+++...+.
T Consensus 274 ~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 274 TQAMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp HHHHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESCH
T ss_pred HHHHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECCH
Confidence 1 111 379999963211 123456777778999998887653
No 261
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.27 E-value=2.6e-11 Score=102.28 Aligned_cols=132 Identities=11% Similarity=0.010 Sum_probs=99.2
Q ss_pred CCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC------------------CceEEEEeCCHHHHHHHH
Q 026688 41 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL------------------FSLVVALDYSENMLKQCY 102 (235)
Q Consensus 41 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------------~~~v~~~D~s~~~~~~a~ 102 (235)
+.+..+....+.+.+.+.+.++.+|||.+||+|.++..+++... ...++|+|+++.+++.|+
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 44666788888888888877788999999999999988776421 237999999999999999
Q ss_pred HHhhhcCCCCC--CCeeEEecccccCC-CCCCceeEEEecccccccCC--------------hHHHHHHHHHhccCCcEE
Q 026688 103 EFVQQESNFPK--ENFLLVRADISRLP-FASSSIDAVHAGAAIHCWSS--------------PSTGVAEISRVLRPGGVF 165 (235)
Q Consensus 103 ~~~~~~~~~~~--~~~~~~~~d~~~~~-~~~~~~D~i~~~~~l~~~~~--------------~~~~l~~~~~~L~pgG~l 165 (235)
.++...+.... .++.+.++|....+ .....||+|+++-.+..... ...++.++.+.|+|||++
T Consensus 229 ~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ 308 (541)
T 2ar0_A 229 MNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRA 308 (541)
T ss_dssp HHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEE
Confidence 98876553100 02778899986543 33568999999865543221 137899999999999999
Q ss_pred EEEEecc
Q 026688 166 VGTTYIV 172 (235)
Q Consensus 166 i~~~~~~ 172 (235)
.++.+..
T Consensus 309 a~V~p~~ 315 (541)
T 2ar0_A 309 AVVVPDN 315 (541)
T ss_dssp EEEEEHH
T ss_pred EEEecCc
Confidence 9988753
No 262
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.27 E-value=3.8e-10 Score=90.43 Aligned_cols=159 Identities=11% Similarity=0.035 Sum_probs=101.0
Q ss_pred CCeEEEecCCCchHHHHHHH--------c-------CCCceEEEEeCCHHHHHHHHHHhhhcCC--------C-CCCCee
Q 026688 62 GGNIIDASCGSGLFSRIFAK--------S-------GLFSLVVALDYSENMLKQCYEFVQQESN--------F-PKENFL 117 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~--------~-------~~~~~v~~~D~s~~~~~~a~~~~~~~~~--------~-~~~~~~ 117 (235)
+.+|+|+|||+|.++..+.. + .|..+|...|+-.......=+.+..... . ...+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999999887722 2 2567899999866554444333332100 0 000111
Q ss_pred E---EecccccCCCCCCceeEEEecccccccCChH--------------------------------------HHHHHHH
Q 026688 118 L---VRADISRLPFASSSIDAVHAGAAIHCWSSPS--------------------------------------TGVAEIS 156 (235)
Q Consensus 118 ~---~~~d~~~~~~~~~~~D~i~~~~~l~~~~~~~--------------------------------------~~l~~~~ 156 (235)
| +.+.+..-.+|.+++|+|+++.++|++.+.. .+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2333333457789999999999999987322 3578889
Q ss_pred HhccCCcEEEEEEeccCCCcccc-----hhH-HHHHHhHh--------------hcCCceeecCHHHHHHHHH-HcCCce
Q 026688 157 RVLRPGGVFVGTTYIVDGPFNLI-----PFS-RLLRQNMM--------------QISGSYTFLSEREIEDLCR-ACGLVD 215 (235)
Q Consensus 157 ~~L~pgG~li~~~~~~~~~~~~~-----~~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~-~~Gf~~ 215 (235)
+.|+|||.++++.....+..... ... ..+...+. ...-...+.+.++++.+++ +.||++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 99999999999999876532221 000 11211111 1223456789999999998 589988
Q ss_pred eEEEe
Q 026688 216 FKCTR 220 (235)
Q Consensus 216 ~~~~~ 220 (235)
.....
T Consensus 293 ~~le~ 297 (374)
T 3b5i_A 293 DKLVV 297 (374)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77654
No 263
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.27 E-value=1.4e-10 Score=91.00 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=87.2
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
.+...+...++.+|||+|||+|..+..+++. .+..+|+++|+++.+++.+++++...+ ..++.+...|+.+.+...
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g---~~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG---VSCCELAEEDFLAVSPSD 169 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGSCTTC
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCeEEEEeCChHhcCccc
Confidence 4445566677899999999999999999886 345699999999999999999998765 347999999998764321
Q ss_pred ---CceeEEEecc------cccccC-----------Ch-------HHHHHHHHHhccCCcEEEEEEeccC
Q 026688 131 ---SSIDAVHAGA------AIHCWS-----------SP-------STGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 131 ---~~~D~i~~~~------~l~~~~-----------~~-------~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
.+||.|++.- ++..-+ +. .++|+.+.++++ ||.|+.++.+..
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 5799999741 221111 11 146777777776 999998887653
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.26 E-value=3.5e-11 Score=92.62 Aligned_cols=89 Identities=18% Similarity=0.220 Sum_probs=74.9
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++ +|||||||+|.++..+++.+. +|+++|+|+.+++.+++++. ..+++++++|+.+
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~------~~~v~vi~~D~l~ 102 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLS------GLPVRLVFQDALL 102 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTT------TSSEEEEESCGGG
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcC------CCCEEEEECChhh
Confidence 46778888888888778 999999999999999999874 99999999999999999875 2479999999998
Q ss_pred CCCCC-CceeEEEeccccc
Q 026688 126 LPFAS-SSIDAVHAGAAIH 143 (235)
Q Consensus 126 ~~~~~-~~~D~i~~~~~l~ 143 (235)
.+++. ..+|.|+++...+
T Consensus 103 ~~~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 103 YPWEEVPQGSLLVANLPYH 121 (271)
T ss_dssp SCGGGSCTTEEEEEEECSS
T ss_pred CChhhccCccEEEecCccc
Confidence 87653 2688888775443
No 265
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.25 E-value=2.4e-11 Score=94.94 Aligned_cols=90 Identities=17% Similarity=0.207 Sum_probs=74.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
..+.+.+.+.+...++.+|||+|||+|..+..+++..+..+|+|+|+|+.+++.|++++...+ .+++++++|+.++
T Consensus 12 pvLl~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l 87 (301)
T 1m6y_A 12 PVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREA 87 (301)
T ss_dssp CTTHHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGH
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHH
Confidence 345667777777777899999999999999999998766799999999999999999987653 4799999999876
Q ss_pred C--CC---CCceeEEEecc
Q 026688 127 P--FA---SSSIDAVHAGA 140 (235)
Q Consensus 127 ~--~~---~~~~D~i~~~~ 140 (235)
+ +. ..+||.|++..
T Consensus 88 ~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 88 DFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHhcCCCCCCEEEEcC
Confidence 4 11 15799999754
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.18 E-value=1e-10 Score=94.45 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=83.0
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHhhhcCCCCCCC-eeEEecccccCC--CCCCceeEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKEN-FLLVRADISRLP--FASSSIDAV 136 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~-~~~~~~d~~~~~--~~~~~~D~i 136 (235)
++.+|||++||+|.++..++.+... .+|+++|+++..++.+++++..++. ..+ +++.++|+.+.- ...+.||+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl--~~~~v~v~~~Da~~~l~~~~~~~fD~V 129 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI--PEDRYEIHGMEANFFLRKEWGFGFDYV 129 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC--CGGGEEEECSCHHHHHHSCCSSCEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC--CCceEEEEeCCHHHHHHHhhCCCCcEE
Confidence 4689999999999999999986433 5899999999999999999998764 234 899999986531 124579999
Q ss_pred EecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 137 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 137 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
++.- ...+..+++.+.+.|+|||.|+++.
T Consensus 130 ~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 130 DLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 9865 2234578999999999999887766
No 267
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.18 E-value=6.2e-10 Score=89.25 Aligned_cols=154 Identities=13% Similarity=0.024 Sum_probs=99.1
Q ss_pred CCeEEEecCCCchHHHHHHHc-----------------CCCceEEEEeCC-----------HHHHHHHHHHhhhcCCCCC
Q 026688 62 GGNIIDASCGSGLFSRIFAKS-----------------GLFSLVVALDYS-----------ENMLKQCYEFVQQESNFPK 113 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~-----------------~~~~~v~~~D~s-----------~~~~~~a~~~~~~~~~~~~ 113 (235)
..+|+|+||++|.++..+... .|..+|+..|+- +.+.+.+++.. +. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~---g~--~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN---GR--K 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT---CC--C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc---cC--C
Confidence 578999999999998877654 356788899986 33333332221 10 1
Q ss_pred CCeeEEeccc---ccCCCCCCceeEEEecccccccCChHH---------------------------------------H
Q 026688 114 ENFLLVRADI---SRLPFASSSIDAVHAGAAIHCWSSPST---------------------------------------G 151 (235)
Q Consensus 114 ~~~~~~~~d~---~~~~~~~~~~D~i~~~~~l~~~~~~~~---------------------------------------~ 151 (235)
.+..|+.+.- ..-.+|.+++|+|+++.++|++.+... +
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 1234444433 334578899999999999999865421 2
Q ss_pred HHHHHHhccCCcEEEEEEeccCCC--cccc-hhHHHHHHh-----------HhhcCCceeecCHHHHHHHHHHcC-Ccee
Q 026688 152 VAEISRVLRPGGVFVGTTYIVDGP--FNLI-PFSRLLRQN-----------MMQISGSYTFLSEREIEDLCRACG-LVDF 216 (235)
Q Consensus 152 l~~~~~~L~pgG~li~~~~~~~~~--~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~G-f~~~ 216 (235)
|+.-.+.|+|||.+++........ .... ......+.. +.....+..+.+.++++.++++.| |++.
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~ 287 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEIL 287 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEE
Confidence 555689999999999999887653 2110 012222211 112333567789999999999985 7776
Q ss_pred EEEe
Q 026688 217 KCTR 220 (235)
Q Consensus 217 ~~~~ 220 (235)
....
T Consensus 288 ~le~ 291 (384)
T 2efj_A 288 YLET 291 (384)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6553
No 268
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.16 E-value=1.2e-10 Score=93.99 Aligned_cols=102 Identities=18% Similarity=0.121 Sum_probs=82.0
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc---------------CCCCCCCeeEEeccccc
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SNFPKENFLLVRADISR 125 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~---------------~~~~~~~~~~~~~d~~~ 125 (235)
++.+|||+|||+|..+..+++..+..+|+++|+++.+++.+++++..+ +. .++++.+.|+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl---~~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE---KTIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS---SEEEEEESCHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC---CceEEEcCcHHH
Confidence 478999999999999999999855568999999999999999999876 42 348899999876
Q ss_pred CC-CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 126 LP-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 126 ~~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.. ...+.||+|++.- . .....+++.+.+.|+|||.++++.
T Consensus 124 ~~~~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 42 1135799999643 1 234678999999999999877765
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.15 E-value=5.3e-10 Score=97.06 Aligned_cols=130 Identities=15% Similarity=0.017 Sum_probs=95.6
Q ss_pred CCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcC-------------------------------------
Q 026688 41 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG------------------------------------- 83 (235)
Q Consensus 41 ~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------------------------------------- 83 (235)
...|..+.+...++......++..|||.+||+|.+++..+...
T Consensus 170 ~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~ 249 (703)
T 3v97_A 170 GIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRAR 249 (703)
T ss_dssp CCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhh
Confidence 3445667888888888887778899999999999998877642
Q ss_pred -----CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC--CCceeEEEecccccc-cCC---hHHH-
Q 026688 84 -----LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA--SSSIDAVHAGAAIHC-WSS---PSTG- 151 (235)
Q Consensus 84 -----~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~i~~~~~l~~-~~~---~~~~- 151 (235)
+...++|+|+++.+++.|+.++...+. ...+++.+.|+.+...+ .+.||+|+++--+.. +.+ ...+
T Consensus 250 ~~~~~~~~~i~G~Did~~av~~A~~N~~~agv--~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly 327 (703)
T 3v97_A 250 KGLAEYSSHFYGSDSDARVIQRARTNARLAGI--GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALH 327 (703)
T ss_dssp HHHHHCCCCEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHH
T ss_pred hccccCCccEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHH
Confidence 125899999999999999999988765 34589999999886322 338999999844421 222 1233
Q ss_pred --HHHHHHhccCCcEEEEEEecc
Q 026688 152 --VAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 152 --l~~~~~~L~pgG~li~~~~~~ 172 (235)
+.++.+.+.|||.+++.+...
T Consensus 328 ~~l~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 328 SLLGRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHHHHhhCCCCeEEEEeCCH
Confidence 444555556899999877644
No 270
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.14 E-value=2.5e-10 Score=96.19 Aligned_cols=130 Identities=18% Similarity=0.041 Sum_probs=97.5
Q ss_pred cCCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCC---------------CceEEEEeCCHHHHHHHHHH
Q 026688 40 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL---------------FSLVVALDYSENMLKQCYEF 104 (235)
Q Consensus 40 ~~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---------------~~~v~~~D~s~~~~~~a~~~ 104 (235)
.+.+..+....+.+.+.+.+.++ +|||.+||+|.++..+.+... ...++|+|+++.++..|+.+
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 35667788999999998887654 999999999999887754311 35899999999999999998
Q ss_pred hhhcCCCCCCCeeEEecccccCC-CCCCceeEEEecccccc-------------------------cCC---h-HHHHHH
Q 026688 105 VQQESNFPKENFLLVRADISRLP-FASSSIDAVHAGAAIHC-------------------------WSS---P-STGVAE 154 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~i~~~~~l~~-------------------------~~~---~-~~~l~~ 154 (235)
+...+. ..++.+.++|....+ .+...||+|+++--+.. .+. . ..++.+
T Consensus 303 l~l~gi--~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~ 380 (544)
T 3khk_A 303 MVIRGI--DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLH 380 (544)
T ss_dssp HHHTTC--CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHH
T ss_pred HHHhCC--CcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHH
Confidence 877654 223444778876543 34578999999744331 111 1 268999
Q ss_pred HHHhccCCcEEEEEEecc
Q 026688 155 ISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 155 ~~~~L~pgG~li~~~~~~ 172 (235)
+.+.|+|||++.++.+..
T Consensus 381 ~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 381 MLYHLAPTGSMALLLANG 398 (544)
T ss_dssp HHHTEEEEEEEEEEEETH
T ss_pred HHHHhccCceEEEEecch
Confidence 999999999999988753
No 271
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.10 E-value=1.8e-09 Score=90.77 Aligned_cols=132 Identities=17% Similarity=0.061 Sum_probs=100.1
Q ss_pred cCCCCCCHHHHHHHHhhcC----CCCCCeEEEecCCCchHHHHHHHcC---CCceEEEEeCCHHHHHHHHHHhhhcCCCC
Q 026688 40 WGGFPGPEKEFELMKGYLK----PVLGGNIIDASCGSGLFSRIFAKSG---LFSLVVALDYSENMLKQCYEFVQQESNFP 112 (235)
Q Consensus 40 ~~~~~~~~~~~~~i~~~~~----~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 112 (235)
.+.+..|....+.+.+.+. +.++.+|+|.+||+|.++..+++.. ....++|+|+++.+...|+.++...+..
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~- 274 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP- 274 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC-
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC-
Confidence 3556778888888888776 4467899999999999998887763 2468999999999999999988766531
Q ss_pred CCCeeEEecccccC--C-CCCCceeEEEecccccc-------------------cC---Ch-HHHHHHHHHhcc-CCcEE
Q 026688 113 KENFLLVRADISRL--P-FASSSIDAVHAGAAIHC-------------------WS---SP-STGVAEISRVLR-PGGVF 165 (235)
Q Consensus 113 ~~~~~~~~~d~~~~--~-~~~~~~D~i~~~~~l~~-------------------~~---~~-~~~l~~~~~~L~-pgG~l 165 (235)
..++.+.++|.... | .....||+|+++--+.. ++ +. ..++.++.+.|+ |||++
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~ 354 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVM 354 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEE
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeE
Confidence 14678999998765 3 34578999998733210 10 00 248999999999 99999
Q ss_pred EEEEecc
Q 026688 166 VGTTYIV 172 (235)
Q Consensus 166 i~~~~~~ 172 (235)
.++.+..
T Consensus 355 a~VlP~g 361 (542)
T 3lkd_A 355 AIVLPHG 361 (542)
T ss_dssp EEEEETH
T ss_pred EEEecch
Confidence 9988764
No 272
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.10 E-value=4.1e-10 Score=87.07 Aligned_cols=77 Identities=13% Similarity=0.175 Sum_probs=65.2
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCC--ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 123 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~ 123 (235)
.....+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+++|+|+.+++.++++. ..+++++++|+
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-------~~~v~~i~~D~ 99 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-------GELLELHAGDA 99 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-------GGGEEEEESCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-------CCCcEEEECCh
Confidence 4567788888888878899999999999999999998652 33999999999999999883 13799999999
Q ss_pred ccCCCC
Q 026688 124 SRLPFA 129 (235)
Q Consensus 124 ~~~~~~ 129 (235)
.+.+++
T Consensus 100 ~~~~~~ 105 (279)
T 3uzu_A 100 LTFDFG 105 (279)
T ss_dssp GGCCGG
T ss_pred hcCChh
Confidence 987654
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.08 E-value=4e-11 Score=91.81 Aligned_cols=88 Identities=15% Similarity=0.135 Sum_probs=66.6
Q ss_pred HHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCH-------HHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 53 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE-------NMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 53 i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~-------~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
+...+...++.+|||+|||+|..+..+++.+ .+|+++|+++ .+++.|+++...++. ..+++++++|+.+
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~--~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQDT--AARINLHFGNAAE 150 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH--HTTEEEEESCHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC--ccCeEEEECCHHH
Confidence 3444444456899999999999999999975 4999999999 999999887655432 2359999999977
Q ss_pred C-C-CCC--CceeEEEecccccc
Q 026688 126 L-P-FAS--SSIDAVHAGAAIHC 144 (235)
Q Consensus 126 ~-~-~~~--~~~D~i~~~~~l~~ 144 (235)
. + ++. ++||+|++.-.+.+
T Consensus 151 ~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 151 QMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHhhhccCCCccEEEECCCCCC
Confidence 4 2 333 68999999876654
No 274
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.07 E-value=1.6e-09 Score=86.21 Aligned_cols=156 Identities=14% Similarity=0.071 Sum_probs=104.8
Q ss_pred CCeEEEecCCCchHHHHHHHc----------------CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe---cc
Q 026688 62 GGNIIDASCGSGLFSRIFAKS----------------GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR---AD 122 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~----------------~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~d 122 (235)
..+|+|+||++|.++..+... .|..+|+..|+-.......-+.+..... ..+..|.. +.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~--~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEND--VDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCS--CTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcc--cCCCEEEEecchh
Confidence 578999999999887755433 4567899999988777777666543210 11223433 33
Q ss_pred cccCCCCCCceeEEEecccccccCChH---------------------------------HHHHHHHHhccCCcEEEEEE
Q 026688 123 ISRLPFASSSIDAVHAGAAIHCWSSPS---------------------------------TGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 123 ~~~~~~~~~~~D~i~~~~~l~~~~~~~---------------------------------~~l~~~~~~L~pgG~li~~~ 169 (235)
+..-.+|.+++|+|+++.++|++.+.. .+|+.-.+.|+|||.+++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 444457889999999999999986421 24888899999999999999
Q ss_pred eccCCCcccc----hhHHHHHHhHh--------------hcCCceeecCHHHHHHHHHHcCC-ceeEEE
Q 026688 170 YIVDGPFNLI----PFSRLLRQNMM--------------QISGSYTFLSEREIEDLCRACGL-VDFKCT 219 (235)
Q Consensus 170 ~~~~~~~~~~----~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~Gf-~~~~~~ 219 (235)
....+..... .+...+...|. ...-+..+.+.++++..+++.|. ++....
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 8776532110 11222222221 12334678889999999999965 665544
No 275
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.06 E-value=1.7e-09 Score=82.43 Aligned_cols=77 Identities=16% Similarity=0.366 Sum_probs=65.5
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++ . ..+++++++|+.+
T Consensus 16 d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~------~~~v~~i~~D~~~ 87 (249)
T 3ftd_A 16 SEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G------DERLEVINEDASK 87 (249)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C------CTTEEEECSCTTT
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c------CCCeEEEEcchhh
Confidence 45677888888888778999999999999999999884 35999999999999999876 1 4579999999998
Q ss_pred CCCCC
Q 026688 126 LPFAS 130 (235)
Q Consensus 126 ~~~~~ 130 (235)
.+++.
T Consensus 88 ~~~~~ 92 (249)
T 3ftd_A 88 FPFCS 92 (249)
T ss_dssp CCGGG
T ss_pred CChhH
Confidence 87653
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.05 E-value=1.1e-09 Score=83.54 Aligned_cols=143 Identities=13% Similarity=0.037 Sum_probs=93.5
Q ss_pred CCCCeEEEecCCCchHHHHHHHc-------CCC-----ceEEEEeCCH---HHHH-----------HHHHHhhhcC----
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKS-------GLF-----SLVVALDYSE---NMLK-----------QCYEFVQQES---- 109 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~-------~~~-----~~v~~~D~s~---~~~~-----------~a~~~~~~~~---- 109 (235)
.+..+|||+|+|+|..+..+.+. .|. ..++++|..| +.+. .+++.+..+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34579999999999988876553 453 5899999876 4444 4555554321
Q ss_pred ------C-CCCCCeeEEeccccc-CCC-CC---CceeEEEecccc-cccCC--hHHHHHHHHHhccCCcEEEEEEeccCC
Q 026688 110 ------N-FPKENFLLVRADISR-LPF-AS---SSIDAVHAGAAI-HCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDG 174 (235)
Q Consensus 110 ------~-~~~~~~~~~~~d~~~-~~~-~~---~~~D~i~~~~~l-~~~~~--~~~~l~~~~~~L~pgG~li~~~~~~~~ 174 (235)
. .+..++++..+|+.+ ++. +. ..||+|+....- ..-++ ...+++.+.++|+|||.|+. +..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa-- 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS-- 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC--
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC--
Confidence 0 012457789999876 332 22 279999985321 11111 24789999999999999883 221
Q ss_pred CcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEEeeC-cEEEEEEecC
Q 026688 175 PFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNR-GFVMFTATKP 232 (235)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-~~~~~~~~k~ 232 (235)
...+++.|..+||++.+....+ ...+.++.|+
T Consensus 215 --------------------------a~~vrr~L~~aGF~v~~~~g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 215 --------------------------AGFVRRGLQEAGFTMQKRKGFGRKREMLCGVME 247 (257)
T ss_dssp --------------------------BHHHHHHHHHHTEEEEEECCSTTCCCEEEEEEC
T ss_pred --------------------------CHHHHHHHHHCCCEEEeCCCCCCCCceEEEEec
Confidence 1356788899999987765544 4456666654
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.03 E-value=3.3e-10 Score=86.42 Aligned_cols=89 Identities=7% Similarity=0.118 Sum_probs=67.6
Q ss_pred CHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 46 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
.....+.+.+.+...++.+|||||||+|.++. +. ++...+|+++|+|+.+++.+++++.. ..+++++++|+.+
T Consensus 6 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~-----~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFL-----GPKLTIYQQDAMT 78 (252)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTT-----GGGEEEECSCGGG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECchhh
Confidence 35567788888877778899999999999999 65 45422399999999999999987643 2479999999988
Q ss_pred CCCCC-----CceeEEEeccc
Q 026688 126 LPFAS-----SSIDAVHAGAA 141 (235)
Q Consensus 126 ~~~~~-----~~~D~i~~~~~ 141 (235)
.+++. +..|.|+++..
T Consensus 79 ~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 79 FNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp CCHHHHHHHHTSCEEEEEECC
T ss_pred CCHHHhhcccCCceEEEECCC
Confidence 76432 23467776644
No 278
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.01 E-value=1.2e-08 Score=74.65 Aligned_cols=101 Identities=10% Similarity=0.013 Sum_probs=74.2
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC--------------
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-------------- 126 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-------------- 126 (235)
+.++|||+||| ..+..+++. ++++|+.+|.+++..+.+++++...+.....++++..+|+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 36899999985 566666664 3679999999999999999999876531123789999996432
Q ss_pred -C--------C-CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 127 -P--------F-ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 127 -~--------~-~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
+ . ..++||+|+...-. ....+..+.+.|+|||.|++-.
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEeC
Confidence 1 1 13679999976532 2355666789999999997644
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.94 E-value=3.2e-09 Score=90.21 Aligned_cols=100 Identities=12% Similarity=0.047 Sum_probs=74.7
Q ss_pred CCeEEEecCCCchHHHHHHHcC----CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEE
Q 026688 62 GGNIIDASCGSGLFSRIFAKSG----LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 137 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~----~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 137 (235)
...|||+|||+|-++...++.+ ...+|+++|-++ +...+++....+++ ..+|+++.+|+++..+| +++|+||
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~--~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW--GSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT--GGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC--CCeEEEEeCcceeccCC-cccCEEE
Confidence 4579999999999955544432 234799999997 66778887777776 56899999999998765 7899999
Q ss_pred ec---ccccccCChHHHHHHHHHhccCCcEEE
Q 026688 138 AG---AAIHCWSSPSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 138 ~~---~~l~~~~~~~~~l~~~~~~L~pgG~li 166 (235)
+= ..+.+-. ....+....+.|||||.++
T Consensus 434 SEwMG~fLl~E~-mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNEL-SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGC-HHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccC-CHHHHHHHHHhcCCCcEEc
Confidence 62 2222222 2257778889999999876
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.94 E-value=2.5e-08 Score=86.18 Aligned_cols=134 Identities=13% Similarity=0.010 Sum_probs=92.3
Q ss_pred ccCCCCCCHHHHHHHHhh----cCC--CCCCeEEEecCCCchHHHHHHHcCC---CceEEEEeCCHHHHHHHH--HHhhh
Q 026688 39 VWGGFPGPEKEFELMKGY----LKP--VLGGNIIDASCGSGLFSRIFAKSGL---FSLVVALDYSENMLKQCY--EFVQQ 107 (235)
Q Consensus 39 ~~~~~~~~~~~~~~i~~~----~~~--~~~~~vLdiG~G~G~~~~~l~~~~~---~~~v~~~D~s~~~~~~a~--~~~~~ 107 (235)
..+.++-+..+.+.+... +.. .++.+|||.|||+|.++..+++..+ ...++|+|+++.+++.|+ ..+..
T Consensus 293 k~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~l 372 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLF 372 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTS
T ss_pred cCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHH
Confidence 345667788888887776 332 3478999999999999999988753 358999999999999994 33322
Q ss_pred cCC-CCCCCeeEEecccccC-CCCCCceeEEEecccccc-cC---------------------------C-hHHHHHHHH
Q 026688 108 ESN-FPKENFLLVRADISRL-PFASSSIDAVHAGAAIHC-WS---------------------------S-PSTGVAEIS 156 (235)
Q Consensus 108 ~~~-~~~~~~~~~~~d~~~~-~~~~~~~D~i~~~~~l~~-~~---------------------------~-~~~~l~~~~ 156 (235)
+.. .+.....+...|+... +.....||+|+++--+.. .. + ...++..+.
T Consensus 373 N~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al 452 (878)
T 3s1s_A 373 PQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVT 452 (878)
T ss_dssp TTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHH
T ss_pred hhhhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHH
Confidence 111 0012235566666552 223578999999754411 10 1 124788999
Q ss_pred HhccCCcEEEEEEecc
Q 026688 157 RVLRPGGVFVGTTYIV 172 (235)
Q Consensus 157 ~~L~pgG~li~~~~~~ 172 (235)
+.|+|||.+.+..+..
T Consensus 453 ~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 453 ELVQDGTVISAIMPKQ 468 (878)
T ss_dssp HHSCTTCEEEEEEETH
T ss_pred HhcCCCcEEEEEEChH
Confidence 9999999999988764
No 281
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.94 E-value=2.4e-09 Score=86.65 Aligned_cols=73 Identities=10% Similarity=0.154 Sum_probs=62.1
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCCCCeeEEecccccC-CC-CCCceeEEE
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPKENFLLVRADISRL-PF-ASSSIDAVH 137 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~~~d~~~~-~~-~~~~~D~i~ 137 (235)
+.+|||+|||+|..+..+++.+. +|+++|+|+.+++.|++++... + ..+++++++|+.+. +. +.+.||+|+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~g---l~~i~~i~~Da~~~L~~~~~~~fDvV~ 168 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNE---GKDVNILTGDFKEYLPLIKTFHPDYIY 168 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCT---TCEEEEEESCGGGSHHHHHHHCCSEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccC---CCcEEEEECcHHHhhhhccCCCceEEE
Confidence 78999999999999999998764 9999999999999999998865 4 24799999999874 31 235899999
Q ss_pred ec
Q 026688 138 AG 139 (235)
Q Consensus 138 ~~ 139 (235)
+.
T Consensus 169 lD 170 (410)
T 3ll7_A 169 VD 170 (410)
T ss_dssp EC
T ss_pred EC
Confidence 85
No 282
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.91 E-value=1.5e-09 Score=82.84 Aligned_cols=109 Identities=15% Similarity=0.021 Sum_probs=71.8
Q ss_pred HHHhhcCCCCC--CeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcC----CCC--CCCeeEEeccc
Q 026688 52 LMKGYLKPVLG--GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----NFP--KENFLLVRADI 123 (235)
Q Consensus 52 ~i~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~----~~~--~~~~~~~~~d~ 123 (235)
.+.+.+...++ .+|||+|||+|..+..++.++. +|+++|+++.+.+.+++.+.... ... ..+++++++|.
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 44555555556 8999999999999999999864 89999999987666665543210 000 13689999998
Q ss_pred ccC-CCCCCceeEEEecccccccCChHHHHHHHHHhccCCc
Q 026688 124 SRL-PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 163 (235)
Q Consensus 124 ~~~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG 163 (235)
.+. +...+.||+|++.-.+.+-. ....+++..+++++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCC-C-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCCcc-cchHHHHHHHHHHHhh
Confidence 763 32224799999987776532 2244555666665543
No 283
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.90 E-value=4.5e-09 Score=79.64 Aligned_cols=115 Identities=16% Similarity=0.118 Sum_probs=74.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 130 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 130 (235)
.++.+.....+..+|||+|||+|.+++.++++.+...+.++|+..++....... ... ..++.....++....++.
T Consensus 64 ~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~----g~~ii~~~~~~dv~~l~~ 138 (277)
T 3evf_A 64 RWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSL----GWNIITFKDKTDIHRLEP 138 (277)
T ss_dssp HHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBT----TGGGEEEECSCCTTTSCC
T ss_pred HHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcC----CCCeEEEeccceehhcCC
Confidence 333333445567899999999999999988775555788899874431000000 000 114455556554445566
Q ss_pred CceeEEEecccccccCCh-----H--HHHHHHHHhccCC-cEEEEEEec
Q 026688 131 SSIDAVHAGAAIHCWSSP-----S--TGVAEISRVLRPG-GVFVGTTYI 171 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~-----~--~~l~~~~~~L~pg-G~li~~~~~ 171 (235)
..||+|++..+.+ .... . .+++.+.++|+|| |.+++-.+.
T Consensus 139 ~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 139 VKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 7899999987655 2221 1 3568889999999 999997665
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.87 E-value=8.1e-08 Score=76.52 Aligned_cols=109 Identities=14% Similarity=0.209 Sum_probs=79.5
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcC-----CCCCCCeeEEecccccC----CCCC
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----NFPKENFLLVRADISRL----PFAS 130 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~-----~~~~~~~~~~~~d~~~~----~~~~ 130 (235)
.++++||-||.|.|..+..+++..+ .+++.+|+++.+++.|++.+.... ....++++++..|.... .-..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 3468999999999999999998654 789999999999999999875321 11124588899998642 1124
Q ss_pred CceeEEEeccccccc-CCh---------HHHHHHHHHhccCCcEEEEEE
Q 026688 131 SSIDAVHAGAAIHCW-SSP---------STGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~-~~~---------~~~l~~~~~~L~pgG~li~~~ 169 (235)
++||+|+....-... .++ ..+++.+++.|+|||.++...
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 679999976432111 111 367899999999999988653
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.83 E-value=1.4e-07 Score=75.23 Aligned_cols=126 Identities=14% Similarity=0.044 Sum_probs=94.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCC---CCCCeeEEecccccCC
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF---PKENFLLVRADISRLP 127 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---~~~~~~~~~~d~~~~~ 127 (235)
......+.+.++.+|||+.+|.|.-+.++++......++++|+++.-++..++++...+.. ...++.+...|....+
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc
Confidence 3445567788899999999999999999999887778999999999999888888764321 1246788888887653
Q ss_pred -CCCCceeEEEecccc--------cccCC------h----------HHHHHHHHHhccCCcEEEEEEeccCCCc
Q 026688 128 -FASSSIDAVHAGAAI--------HCWSS------P----------STGVAEISRVLRPGGVFVGTTYIVDGPF 176 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l--------~~~~~------~----------~~~l~~~~~~L~pgG~li~~~~~~~~~~ 176 (235)
...+.||.|++.--. ..-++ + .++|..+.++|||||.|+.++.+....+
T Consensus 218 ~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~E 291 (359)
T 4fzv_A 218 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQ 291 (359)
T ss_dssp HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTT
T ss_pred hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhh
Confidence 345789999964221 10011 0 2678899999999999999999876533
No 286
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.80 E-value=1.3e-08 Score=86.64 Aligned_cols=102 Identities=14% Similarity=0.102 Sum_probs=72.0
Q ss_pred CCeEEEecCCCchHHHHHHHc----C---------CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC
Q 026688 62 GGNIIDASCGSGLFSRIFAKS----G---------LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 128 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~----~---------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~ 128 (235)
+..|||+|||+|-++...++. + ...+|+++|.++......+.+.. +++ ..+++++.+|+++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~--~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTW--KRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTT--TTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCC--CCeEEEEeCchhhccc
Confidence 468999999999997543222 2 23589999999977766555544 444 4579999999998765
Q ss_pred C-----CCceeEEEecccccccCC--hHHHHHHHHHhccCCcEEE
Q 026688 129 A-----SSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 129 ~-----~~~~D~i~~~~~l~~~~~--~~~~l~~~~~~L~pgG~li 166 (235)
+ .++.|+||+=..=....+ ....|..+.+.|+|||.++
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 478999997433111111 1357777889999999876
No 287
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.76 E-value=5.2e-08 Score=74.37 Aligned_cols=86 Identities=16% Similarity=0.219 Sum_probs=70.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
..+++.+++.+...++..+||.+||.|..+..++++ .+.|+|+|.++.+++.+++ +.. .++.++..++.++
T Consensus 8 pVLl~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l 78 (285)
T 1wg8_A 8 PVLYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHL 78 (285)
T ss_dssp CTTHHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGH
T ss_pred hHHHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchH
Confidence 345677788888888899999999999999999998 4699999999999999998 642 4799999999876
Q ss_pred C-----CCCCceeEEEeccc
Q 026688 127 P-----FASSSIDAVHAGAA 141 (235)
Q Consensus 127 ~-----~~~~~~D~i~~~~~ 141 (235)
+ ...+++|.|++...
T Consensus 79 ~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLG 98 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHcCCCCcCEEEeCCc
Confidence 3 12257999997543
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.75 E-value=8.1e-09 Score=78.39 Aligned_cols=114 Identities=14% Similarity=0.033 Sum_probs=73.0
Q ss_pred HHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCC
Q 026688 52 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 131 (235)
Q Consensus 52 ~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 131 (235)
++.+.....+..+|||+|||+|.+++.+++..+...+.|+|+...+...+... ... ..++.....+.....++..
T Consensus 81 ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~----g~~ii~~~~~~dv~~l~~~ 155 (282)
T 3gcz_A 81 WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL----GWNLIRFKDKTDVFNMEVI 155 (282)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT----TGGGEEEECSCCGGGSCCC
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC----CCceEEeeCCcchhhcCCC
Confidence 33333355667899999999999999988766666899999976532111100 000 1233333333222234467
Q ss_pred ceeEEEecccccccCCh-------HHHHHHHHHhccCC--cEEEEEEec
Q 026688 132 SIDAVHAGAAIHCWSSP-------STGVAEISRVLRPG--GVFVGTTYI 171 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~-------~~~l~~~~~~L~pg--G~li~~~~~ 171 (235)
++|+|+|..... .... ..+|+-+.++|+|| |.+++-.+.
T Consensus 156 ~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 156 PGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 899999987765 3322 14577778999999 999997765
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.72 E-value=2.9e-07 Score=77.43 Aligned_cols=130 Identities=17% Similarity=0.135 Sum_probs=96.8
Q ss_pred cCCCCCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc----C---------CCceEEEEeCCHHHHHHHHHHhh
Q 026688 40 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS----G---------LFSLVVALDYSENMLKQCYEFVQ 106 (235)
Q Consensus 40 ~~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~---------~~~~v~~~D~s~~~~~~a~~~~~ 106 (235)
.+.+.-|....+.+.+.+.+.++.+|+|.+||+|.++....+. . ....++|+|+++.+...|+-++.
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 3567788999999999999888899999999999998876543 1 12469999999999999998877
Q ss_pred hcCCCCCCCeeEEecccccCCC----CCCceeEEEeccccccc---------C------Ch-HHHHHHHHHhcc------
Q 026688 107 QESNFPKENFLLVRADISRLPF----ASSSIDAVHAGAAIHCW---------S------SP-STGVAEISRVLR------ 160 (235)
Q Consensus 107 ~~~~~~~~~~~~~~~d~~~~~~----~~~~~D~i~~~~~l~~~---------~------~~-~~~l~~~~~~L~------ 160 (235)
.++ ....++..+|....+. ....||+|+++--+.-- + +. ..++..+.+.|+
T Consensus 276 lhg---~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l 352 (530)
T 3ufb_A 276 LHG---LEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGS 352 (530)
T ss_dssp HHT---CSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSS
T ss_pred hcC---CccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhcc
Confidence 665 3345677788765432 23579999998554211 0 01 256788888886
Q ss_pred -CCcEEEEEEecc
Q 026688 161 -PGGVFVGTTYIV 172 (235)
Q Consensus 161 -pgG~li~~~~~~ 172 (235)
|||++.++.+..
T Consensus 353 ~~gGr~avVlP~g 365 (530)
T 3ufb_A 353 DNGGRAAVVVPNG 365 (530)
T ss_dssp SSCCEEEEEEEHH
T ss_pred CCCceEEEEecch
Confidence 799999988753
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.62 E-value=1.7e-07 Score=72.20 Aligned_cols=108 Identities=10% Similarity=0.092 Sum_probs=80.2
Q ss_pred CCCCeEEEecCCCchHHHHHHHcC-----CCceEEEEeCCHH--------------------------HHHHHHHHhhhc
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSEN--------------------------MLKQCYEFVQQE 108 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~-----~~~~v~~~D~s~~--------------------------~~~~a~~~~~~~ 108 (235)
..++.|||+|+..|..+..++... ++.+++++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 447899999999999988876542 3678999996421 467788888876
Q ss_pred CCCCCCCeeEEeccccc-CC-CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 109 SNFPKENFLLVRADISR-LP-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 109 ~~~~~~~~~~~~~d~~~-~~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.. ..+++++.+|+.+ ++ .+.++||+|++..-.+ ......+..+.+.|+|||.|++-+.
T Consensus 185 gl~-~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLL-DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCC-STTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCC-cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 641 2589999999976 33 3356899999765321 2234679999999999999988654
No 291
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.60 E-value=1.2e-07 Score=64.70 Aligned_cols=97 Identities=12% Similarity=0.113 Sum_probs=60.6
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCc-hHHHHHHH-cCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSG-LFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G-~~~~~l~~-~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
.+.|.+... ++.+|||||||.| ..+..|++ .+. .|+++|+++..++ +++.|+.+..
T Consensus 26 aeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av~------------------~v~dDiF~P~ 83 (153)
T 2k4m_A 26 AVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHGG------------------IVRDDITSPR 83 (153)
T ss_dssp HHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSSTT------------------EECCCSSSCC
T ss_pred HHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCccccc------------------eEEccCCCCc
Confidence 334444343 3679999999999 69999987 554 8999999885432 7888887632
Q ss_pred CCC-CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 128 FAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 128 ~~~-~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
... +.||+|.+...- ++.+..+.++.+.+ |.-++|.....+
T Consensus 84 ~~~Y~~~DLIYsirPP---~El~~~i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 84 MEIYRGAALIYSIRPP---AEIHSSLMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp HHHHTTEEEEEEESCC---TTTHHHHHHHHHHH--TCEEEEECBTTB
T ss_pred ccccCCcCEEEEcCCC---HHHHHHHHHHHHHc--CCCEEEEcCCCC
Confidence 211 489999652211 12233344444432 567777666543
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.57 E-value=5e-06 Score=66.05 Aligned_cols=88 Identities=17% Similarity=0.160 Sum_probs=64.4
Q ss_pred CCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 59 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
..++.++||+||.+|.++..+++++. .|++||+.+ +-.... . .+++++...|......+...+|+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~-l~~~l~----~-----~~~V~~~~~d~~~~~~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGP-MAQSLM----D-----TGQVTWLREDGFKFRPTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSC-CCHHHH----T-----TTCEEEECSCTTTCCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh-cChhhc----c-----CCCeEEEeCccccccCCCCCcCEEEE
Confidence 34589999999999999999999865 999999864 222211 1 45899999999887666678999998
Q ss_pred cccccccCChHHHHHHHHHhccCC
Q 026688 139 GAAIHCWSSPSTGVAEISRVLRPG 162 (235)
Q Consensus 139 ~~~l~~~~~~~~~l~~~~~~L~pg 162 (235)
..+. ++...+..+.+.+..+
T Consensus 277 Dm~~----~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 277 DMVE----KPAKVAALMAQWLVNG 296 (375)
T ss_dssp CCSS----CHHHHHHHHHHHHHTT
T ss_pred cCCC----ChHHhHHHHHHHHhcc
Confidence 6654 3545555555544443
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.44 E-value=5.4e-07 Score=68.90 Aligned_cols=106 Identities=14% Similarity=0.130 Sum_probs=67.3
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.++.+|||+||++|.++..+++..+...|.|+|+...+...... .... ..++.....+..-..+....+|+|++.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~----~~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTL----GWNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBT----TGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cccc----CCceEEeecCceeeecCCCCcCEEeec
Confidence 46889999999999999999987555678899997532100000 0000 112222222222222345789999997
Q ss_pred ccccccCCh-------HHHHHHHHHhccCC-cEEEEEEec
Q 026688 140 AAIHCWSSP-------STGVAEISRVLRPG-GVFVGTTYI 171 (235)
Q Consensus 140 ~~l~~~~~~-------~~~l~~~~~~L~pg-G~li~~~~~ 171 (235)
.... .... ..++.-+.++|+|| |.+++-.+.
T Consensus 155 ~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 155 IGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 6655 3322 24577778999999 999998765
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.39 E-value=1.9e-06 Score=67.36 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=53.7
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 108 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 108 (235)
+-+.++.+.+++... .++..|||++||+|..+..+++.+. +++|+|+++.+++.|++++...
T Consensus 219 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 219 PFPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CSCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 446678888888776 4578999999999999999999876 9999999999999999998764
No 295
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.31 E-value=1.4e-07 Score=91.95 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=71.2
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCC-----CceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-CCCCCce
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGL-----FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSI 133 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~-----~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~ 133 (235)
.+..+|||||.|+|..+..+.+... ..+++..|+|+...+.+++++... .+.....|..+. ++..+.|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCce
Confidence 3467999999999987666554421 347999999998888877766432 222222233321 2345679
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhc-CCceeecCHHHHHHHHHHcC
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI-SGSYTFLSEREIEDLCRACG 212 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~G 212 (235)
|+|++..++|..++....+++++++|+|||.+++.+...... . ......+... .......+.++|..+|..+|
T Consensus 1313 dlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~--~----g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~g 1386 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHP--L----GEMVGFLTSPEQGGRHLLSQDQWESLFAGAS 1386 (2512)
T ss_dssp CEEEEECC--------------------CCEEEEEEC--------------------------------CTTTTSSTTTT
T ss_pred eEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEecccccc--c----cccccccccccccCCcccCHHHHHHHHHhCC
Confidence 999999999877788889999999999999999876542110 0 0000000000 01123467788888999999
Q ss_pred CceeEEE
Q 026688 213 LVDFKCT 219 (235)
Q Consensus 213 f~~~~~~ 219 (235)
|..+...
T Consensus 1387 f~~~~~~ 1393 (2512)
T 2vz8_A 1387 LHLVALK 1393 (2512)
T ss_dssp EEEEEEE
T ss_pred Cceeeec
Confidence 9876654
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.31 E-value=9.6e-06 Score=61.83 Aligned_cols=115 Identities=16% Similarity=0.102 Sum_probs=75.4
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec-ccccCCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPF 128 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~ 128 (235)
+..+.+.....++.+|||+||++|.++..++.......|.|+|+-..--+.-+ .....+ ..-+.+... |+..++.
T Consensus 83 L~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~---w~lV~~~~~~Dv~~l~~ 158 (321)
T 3lkz_A 83 LRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYG---WNIVTMKSGVDVFYRPS 158 (321)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTT---GGGEEEECSCCTTSSCC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcC---CcceEEEeccCHhhCCC
Confidence 34444445556788999999999999998877755558999999653110000 000111 123677766 7766553
Q ss_pred CCCceeEEEecccccccCChH-------HHHHHHHHhccCC-cEEEEEEec
Q 026688 129 ASSSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPG-GVFVGTTYI 171 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~-------~~l~~~~~~L~pg-G~li~~~~~ 171 (235)
..+|+|+|.-. +.-+++. .+|.-+.+.|++| |.+.+-.+.
T Consensus 159 --~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 159 --ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp --CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred --CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 66999999877 6556652 3566667889988 888876554
No 297
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.29 E-value=7.4e-06 Score=64.85 Aligned_cols=152 Identities=13% Similarity=0.142 Sum_probs=98.7
Q ss_pred CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCC------------------CCCCCeeEEec
Q 026688 60 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN------------------FPKENFLLVRA 121 (235)
Q Consensus 60 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~------------------~~~~~~~~~~~ 121 (235)
.+...|+.+|||.......+....+...++-+|. |++++.-++.+...+. ....+..++..
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 4568999999999999998887656556666666 7788777776655310 00257889999
Q ss_pred ccccCC--------C-CCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHh
Q 026688 122 DISRLP--------F-ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM 190 (235)
Q Consensus 122 d~~~~~--------~-~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~ 190 (235)
|+.+.. . ..+...++++=.++.+++.. .++++.+.+.. |+|.+++.+..... ....++...+...+.
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~-~~~~~fg~~m~~~l~ 252 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGS-QPNDRFGAIMQSNLK 252 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCC-STTCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCC-CCcchHHHHHHHHhh
Confidence 997632 1 22457788888888888754 47778787776 77777665554431 112233332222222
Q ss_pred h-----cCCceeecCHHHHHHHHHHcCCc
Q 026688 191 Q-----ISGSYTFLSEREIEDLCRACGLV 214 (235)
Q Consensus 191 ~-----~~~~~~~~~~~~~~~~l~~~Gf~ 214 (235)
. ..+...+.++++..+.|.++||.
T Consensus 253 ~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 253 ESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred cccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 1 11112456899999999999997
No 298
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.29 E-value=2e-05 Score=58.99 Aligned_cols=110 Identities=16% Similarity=0.080 Sum_probs=67.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCC-CCe---eEEec-cccc
Q 026688 51 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPK-ENF---LLVRA-DISR 125 (235)
Q Consensus 51 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~-~~~---~~~~~-d~~~ 125 (235)
.+|.+..-.+++.+|||+||+.|.+++..++.-....|.|.++.... . + .+..+. .++ .+..+ |+.+
T Consensus 63 ~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~--~P~~~~~~Gv~~i~~~~G~Df~~ 134 (269)
T 2px2_A 63 RWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----E--EPMLMQSYGWNIVTMKSGVDVFY 134 (269)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----C--CCCCCCSTTGGGEEEECSCCGGG
T ss_pred HHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----c--CCCcccCCCceEEEeeccCCccC
Confidence 34444334456899999999999999999886322244555554321 0 0 011001 233 44446 9877
Q ss_pred CCCCCCceeEEEecccccccCCh-------HHHHHHHHHhccCCc-EEEEEEec
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSP-------STGVAEISRVLRPGG-VFVGTTYI 171 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~-------~~~l~~~~~~L~pgG-~li~~~~~ 171 (235)
.+ ...+|+|+|...-. -.+. ..++.-+.+.|+||| .+++-.+.
T Consensus 135 ~~--~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 135 KP--SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp SC--CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CC--CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 43 45799999976543 2222 135666778999999 88887665
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.26 E-value=1.7e-06 Score=67.57 Aligned_cols=89 Identities=19% Similarity=0.230 Sum_probs=70.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc
Q 026688 47 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 125 (235)
Q Consensus 47 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 125 (235)
..+++.+++.+...++..++|..||.|..+..++++ ++.++|+|+|.++.+++.++ ++. ..+++++..++.+
T Consensus 43 pVLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~------~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID------DPRFSIIHGPFSA 115 (347)
T ss_dssp CTTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC------CTTEEEEESCGGG
T ss_pred cccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc------CCcEEEEeCCHHH
Confidence 346677888888888999999999999999999887 57789999999999999984 431 4589999999987
Q ss_pred CC--CC----CCceeEEEecccc
Q 026688 126 LP--FA----SSSIDAVHAGAAI 142 (235)
Q Consensus 126 ~~--~~----~~~~D~i~~~~~l 142 (235)
+. ++ .+++|.|++...+
T Consensus 116 l~~~L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 116 LGEYVAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHHHHHHTTCTTCEEEEEEECSC
T ss_pred HHHHHHhcCCCCcccEEEECCcc
Confidence 53 11 1369999986443
No 300
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.16 E-value=4.7e-05 Score=56.22 Aligned_cols=115 Identities=16% Similarity=0.114 Sum_probs=75.5
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec-ccccCCC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPF 128 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~ 128 (235)
+..+.+.....++.+|||+||++|.++..++.......|.|+|+-..-.+.- ......+ ...++|..+ |+..++
T Consensus 67 L~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~g---wn~v~fk~gvDv~~~~- 141 (267)
T 3p8z_A 67 LQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYG---WNIVKLMSGKDVFYLP- 141 (267)
T ss_dssp HHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTT---TTSEEEECSCCGGGCC-
T ss_pred HHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcC---cCceEEEeccceeecC-
Confidence 3444444455678899999999999999888775556899999865322100 0001122 246889988 976654
Q ss_pred CCCceeEEEecccccccCChH-------HHHHHHHHhccCCcEEEEEEecc
Q 026688 129 ASSSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~-------~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
...+|.|+|...- .-+++. ++|+-+.+.|++ |.+.+-...+
T Consensus 142 -~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 142 -PEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp -CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred -CccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 2669999997655 334431 356666788988 7777755543
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=98.15 E-value=5.1e-05 Score=59.39 Aligned_cols=151 Identities=13% Similarity=0.029 Sum_probs=97.7
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC---------CCCCc
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------FASSS 132 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~~ 132 (235)
...|+++|||.=.....+.. .....++-+| .|.+++..++.+...+..+..+..++.+|+.+ . +....
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 46899999998766554431 2236888888 59999999888875433234578889999875 2 22234
Q ss_pred eeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHH-HhHhhcC-------Cceee-cC-
Q 026688 133 IDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QNMMQIS-------GSYTF-LS- 200 (235)
Q Consensus 133 ~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~-~~- 200 (235)
.=++++-.+++++++. ..+++.+.+.+.||+.|++.....+.. .......... ..+.... ....+ .+
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 258 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGD-EWREQMQLRFRRVSDALGFEQAVDVQELIYHDEN 258 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCS-HHHHHHHHHHHHHHC-----------CCTTCCTT
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCc-chhHHHHHHHHHHHHHcCCcCCCCccccccCCCC
Confidence 5677777888888754 478889999889999999887654321 0001112111 2222111 12222 35
Q ss_pred HHHHHHHHHHcCCcee
Q 026688 201 EREIEDLCRACGLVDF 216 (235)
Q Consensus 201 ~~~~~~~l~~~Gf~~~ 216 (235)
.+++.+.|.++||+.+
T Consensus 259 ~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 259 RAVVADWLNRHGWRAT 274 (310)
T ss_dssp CCCHHHHHTTTTEEEE
T ss_pred hHHHHHHHHHCcCccc
Confidence 7899999999999877
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.06 E-value=0.00012 Score=56.71 Aligned_cols=141 Identities=13% Similarity=0.076 Sum_probs=85.3
Q ss_pred CCCeEEEecCCCchHHHHH----HHcCCCc--eEEEEeCCH--------H-HHHHHHHHhhhcCCCCCC--CeeEEeccc
Q 026688 61 LGGNIIDASCGSGLFSRIF----AKSGLFS--LVVALDYSE--------N-MLKQCYEFVQQESNFPKE--NFLLVRADI 123 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l----~~~~~~~--~v~~~D~s~--------~-~~~~a~~~~~~~~~~~~~--~~~~~~~d~ 123 (235)
+.-+|||+|-|+|.+.... .+..+.. .++.+|..+ . .-+.........+..... .+++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 3468999999999865432 2334544 456666421 1 111122222211100022 356778888
Q ss_pred cc-CC-CCCCceeEEEecccccccCCh----HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCcee
Q 026688 124 SR-LP-FASSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 197 (235)
Q Consensus 124 ~~-~~-~~~~~~D~i~~~~~l~~~~~~----~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (235)
.+ ++ +....+|+|+....-- -.+| ..+++.++++++|||.+.- +.
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP-~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt-------------------------- 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSP-YKNPELWTLDFLSLIKERIDEKGYWVS--YS-------------------------- 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCT-TTSGGGGSHHHHHHHHTTEEEEEEEEE--SC--------------------------
T ss_pred HHHHhhhcccceeEEEeCCCCc-ccCcccCCHHHHHHHHHHhCCCcEEEE--Ee--------------------------
Confidence 65 33 3445799999755322 2345 4899999999999998762 22
Q ss_pred ecCHHHHHHHHHHcCCceeEEEeeC-cEEEEEEecC
Q 026688 198 FLSEREIEDLCRACGLVDFKCTRNR-GFVMFTATKP 232 (235)
Q Consensus 198 ~~~~~~~~~~l~~~Gf~~~~~~~~~-~~~~~~~~k~ 232 (235)
....+++.|.++||++.+....+ ..-+.+|.++
T Consensus 227 --aag~VRR~L~~aGF~V~k~~G~g~KReml~A~~~ 260 (308)
T 3vyw_A 227 --SSLSVRKSLLTLGFKVGSSREIGRKRKGTVASLK 260 (308)
T ss_dssp --CCHHHHHHHHHTTCEEEEEECC---CEEEEEESS
T ss_pred --CcHHHHHHHHHCCCEEEecCCCCCCCceeEEecC
Confidence 23568899999999988877655 4577777765
No 303
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.98 E-value=3.2e-05 Score=59.12 Aligned_cols=62 Identities=19% Similarity=0.190 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 108 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 108 (235)
+-+..+++.+++... .++..|||..||+|..+....+.+. +++|+|+++..++.+++++...
T Consensus 196 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 196 PKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp CCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhc
Confidence 446778888887765 4578999999999999999998876 9999999999999999998653
No 304
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.89 E-value=5.5e-05 Score=60.15 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=60.9
Q ss_pred CHHHHHHHHhhcCCC------CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEE
Q 026688 46 PEKEFELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 119 (235)
Q Consensus 46 ~~~~~~~i~~~~~~~------~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~ 119 (235)
.....+.|.+.+... ++..|||||.|.|.++..|++.....+|+++|+++.++...++.. . ..+++++
T Consensus 37 d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii 110 (353)
T 1i4w_A 37 NPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQIL 110 (353)
T ss_dssp CHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEE
T ss_pred CHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEE
Confidence 567788888887654 358899999999999999998632348999999999999888776 2 3579999
Q ss_pred ecccccC
Q 026688 120 RADISRL 126 (235)
Q Consensus 120 ~~d~~~~ 126 (235)
.+|+.++
T Consensus 111 ~~D~l~~ 117 (353)
T 1i4w_A 111 KRDPYDW 117 (353)
T ss_dssp CSCTTCH
T ss_pred ECCccch
Confidence 9999654
No 305
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.61 E-value=0.00068 Score=51.81 Aligned_cols=105 Identities=12% Similarity=0.077 Sum_probs=69.2
Q ss_pred HHHHHhhcC-----CCCCCeEEEecC------CCchHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCee
Q 026688 50 FELMKGYLK-----PVLGGNIIDASC------GSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFL 117 (235)
Q Consensus 50 ~~~i~~~~~-----~~~~~~vLdiG~------G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~ 117 (235)
..++.++++ .+.+.+|||+|+ -+|. ..+.+.+|. +.++++|+.+-.. ... .
T Consensus 93 ytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s--------------da~-~ 155 (344)
T 3r24_A 93 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS--------------DAD-S 155 (344)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC--------------SSS-E
T ss_pred HHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc--------------CCC-e
Confidence 345555553 234799999997 4455 455566775 5999999976210 122 4
Q ss_pred EEecccccCCCCCCceeEEEecccc---cccC--C------hHHHHHHHHHhccCCcEEEEEEecc
Q 026688 118 LVRADISRLPFASSSIDAVHAGAAI---HCWS--S------PSTGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 118 ~~~~d~~~~~~~~~~~D~i~~~~~l---~~~~--~------~~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
++++|+..... ..+||+|++...- .+.+ . .+.++.-+.+.|+|||.+++-.+-.
T Consensus 156 ~IqGD~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 156 TLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp EEESCGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred EEEcccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 58999765432 4789999986332 2211 1 1456777889999999999987654
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.48 E-value=0.0022 Score=50.89 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=55.3
Q ss_pred CCeEEEecCCCchHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC---CCCCceeEEE
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSIDAVH 137 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~i~ 137 (235)
..+++|+.||.|.++..+...+.. ..+.++|+++..++..+.+.. ...+.+.|+.+.. ++...+|+++
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~--------~~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP--------HTQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------TSCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc--------ccccccCCHHHccHhHcCcCCcCEEE
Confidence 358999999999999999988732 368999999999999888753 3446788887753 1112689999
Q ss_pred eccccccc
Q 026688 138 AGAAIHCW 145 (235)
Q Consensus 138 ~~~~l~~~ 145 (235)
...-+..+
T Consensus 74 ~gpPCq~f 81 (343)
T 1g55_A 74 MSPPCQPF 81 (343)
T ss_dssp ECCC----
T ss_pred EcCCCcch
Confidence 86554333
No 307
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.43 E-value=0.0057 Score=48.15 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=87.7
Q ss_pred CCeEEEecCCCchHHHHHHHcCCC-ceE-EEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC---CCCCceeEE
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLF-SLV-VALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSIDAV 136 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~-~~v-~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~i 136 (235)
..+++|+-||.|.++.-+.+.+.. ..+ .++|+++..++..+.+... . +...|+.++. ++...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-------~--~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-------E--VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-------C--CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-------C--cccCChhhcCHHHhccCCCCEE
Confidence 468999999999999999988732 356 7999999999888887632 1 4567776653 222368999
Q ss_pred Eeccccccc-----------CChH-HHHHHHHH-hc-----cCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceee
Q 026688 137 HAGAAIHCW-----------SSPS-TGVAEISR-VL-----RPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTF 198 (235)
Q Consensus 137 ~~~~~l~~~-----------~~~~-~~l~~~~~-~L-----~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (235)
+...-+..+ .++. ..+.++.+ ++ +| .+++.+.... ... .
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P--~~~~lENV~g----l~~-----------------~ 137 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKP--KHIFIENVPL----FKE-----------------S 137 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCC--SEEEEEECGG----GGG-----------------S
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCC--CEEEEEchhh----hcC-----------------h
Confidence 976555444 2332 45555555 44 45 3444443321 000 0
Q ss_pred cCHHHHHHHHHHcCCceeEEE---------eeCcEEEEEEecC
Q 026688 199 LSEREIEDLCRACGLVDFKCT---------RNRGFVMFTATKP 232 (235)
Q Consensus 199 ~~~~~~~~~l~~~Gf~~~~~~---------~~~~~~~~~~~k~ 232 (235)
-..+.+.+.|++.|+.+.... ......++++.+.
T Consensus 138 ~~~~~i~~~l~~~GY~v~~~vl~a~~yGvPQ~R~R~fivg~r~ 180 (327)
T 3qv2_A 138 LVFKEIYNILIKNQYYIKDIICSPIDIGIPNSRTRYYVMARLT 180 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECGGGGTCSBCCCEEEEEEESS
T ss_pred HHHHHHHHHHHhCCCEEEEEEEeHHHcCCCccceEEEEEEEeC
Confidence 124677888899999865443 2234567777654
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.43 E-value=0.0048 Score=49.61 Aligned_cols=74 Identities=23% Similarity=0.280 Sum_probs=56.9
Q ss_pred CeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC--------CCCcee
Q 026688 63 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------ASSSID 134 (235)
Q Consensus 63 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~~D 134 (235)
.+++|+-||.|.++.-+.+.+. ..+.++|+++..++..+.+. +...+++.|+.+... ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~--------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINF--------PRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHC--------TTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhC--------CCCceEecChhhcCHHHHHhhcccCCCee
Confidence 5899999999999999998874 35779999999988887763 345677888877531 236799
Q ss_pred EEEeccccccc
Q 026688 135 AVHAGAAIHCW 145 (235)
Q Consensus 135 ~i~~~~~l~~~ 145 (235)
+|+...-+..+
T Consensus 74 ~i~ggpPCQ~f 84 (376)
T 3g7u_A 74 GIIGGPPCQGF 84 (376)
T ss_dssp EEEECCCCCTT
T ss_pred EEEecCCCCCc
Confidence 99976555444
No 309
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.42 E-value=0.00013 Score=55.79 Aligned_cols=105 Identities=9% Similarity=-0.029 Sum_probs=79.4
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-CC---CCCCceeEEE
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP---FASSSIDAVH 137 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~---~~~~~~D~i~ 137 (235)
+..+||+=+|||.++..+...+ .+++.+|.++..++..++++.. ..++++...|... +. .+...||+|+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~fdLVf 164 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKRGLIF 164 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSCEEEE
T ss_pred CCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCccEEE
Confidence 4678999999999999998854 4999999999999988887754 4579999999754 21 2345799999
Q ss_pred ecccccccCChHHHHHHHHH--hccCCcEEEEEEeccC
Q 026688 138 AGAAIHCWSSPSTGVAEISR--VLRPGGVFVGTTYIVD 173 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~--~L~pgG~li~~~~~~~ 173 (235)
+.-.++.-.+..+++..+.+ .+.|+|.+++--+..+
T Consensus 165 iDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 165 IDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp ECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred ECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 87766633344566665555 4568999998877653
No 310
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=97.38 E-value=0.024 Score=44.71 Aligned_cols=153 Identities=10% Similarity=0.106 Sum_probs=93.1
Q ss_pred CCCeEEEecCCCchHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcC--------------C------CCCCCeeEE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES--------------N------FPKENFLLV 119 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~--------------~------~~~~~~~~~ 119 (235)
+...|+-+|||.-.....+.... +...++=+|. |+.++.=++.+...+ . ....+.+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 46799999999987777776542 3345555555 555554333333210 0 013467888
Q ss_pred ecccccC----------CCCCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHH
Q 026688 120 RADISRL----------PFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ 187 (235)
Q Consensus 120 ~~d~~~~----------~~~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~ 187 (235)
..|+.+. .+.....=++++=.++.+++.. .++++.+.+... +|.+++.++... ..++......
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p----~d~fg~~M~~ 243 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNM----GDRFGQIMIE 243 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCT----TSHHHHHHHH
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCC----CCHHHHHHHH
Confidence 8998652 1333455577777788877644 477888877765 455555565532 2344444333
Q ss_pred hHhhc----CCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 188 NMMQI----SGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 188 ~~~~~----~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
.+... .+...+.++++..+.+.++||+.+...
T Consensus 244 ~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 244 NLRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp HHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 33322 222356788999999999999986654
No 311
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.23 E-value=0.0074 Score=47.66 Aligned_cols=140 Identities=14% Similarity=0.135 Sum_probs=86.3
Q ss_pred CCeEEEecCCCchHHHHHHHcCCC-ceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC---CCCCceeEEE
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSIDAVH 137 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~D~i~ 137 (235)
..+++|+-||.|.++.-+.+.+.. ..+.++|+++...+..+.+.. ...+...|+.++. ++...+|+++
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~--------~~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP--------ETNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT--------TSCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC--------CCceeccccccCCHHHhccCCCCEEE
Confidence 358999999999999999888742 357899999999888877643 3446677887653 2223689999
Q ss_pred eccccccc---------CChH-HHHHHHH---Hhcc-CCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHH
Q 026688 138 AGAAIHCW---------SSPS-TGVAEIS---RVLR-PGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 203 (235)
Q Consensus 138 ~~~~l~~~---------~~~~-~~l~~~~---~~L~-pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (235)
...-...+ .++. ..+.++. +.++ | .+++.+....- .. .-..+.
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl----~~-----------------~~~~~~ 131 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGF----EN-----------------STVRNL 131 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTG----GG-----------------SHHHHH
T ss_pred ecCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhh----hh-----------------hhHHHH
Confidence 76444333 2222 2333333 3444 5 34444443210 00 012357
Q ss_pred HHHHHHHcCCceeEEE---------eeCcEEEEEEecC
Q 026688 204 IEDLCRACGLVDFKCT---------RNRGFVMFTATKP 232 (235)
Q Consensus 204 ~~~~l~~~Gf~~~~~~---------~~~~~~~~~~~k~ 232 (235)
+.+.|++.|+.+.... ......++++.+.
T Consensus 132 i~~~l~~~GY~v~~~vl~a~~~GvPQ~R~R~fiva~r~ 169 (333)
T 4h0n_A 132 FIDKLKECNFIYQEFLLCPSTVGVPNSRLRYYCTARRN 169 (333)
T ss_dssp HHHHHHHTTEEEEEEEECTTTTTCSCCCCEEEEEEEET
T ss_pred HHHHHHhCCCeEEEEEecHHHcCCCccceEEEEEEEeC
Confidence 7888899999865443 2234567777654
No 312
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.02 E-value=0.05 Score=42.78 Aligned_cols=72 Identities=18% Similarity=0.184 Sum_probs=53.3
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC-CCCceeEEEecc
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-ASSSIDAVHAGA 140 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~i~~~~ 140 (235)
..+++|+.||.|.++..+...+. ..+.++|+++..++..+.+.... . ..|+.++.. .-..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~-------~---~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEK-------P---EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCC-------C---BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCC-------C---cCCHHHcCHhhCCCCCEEEECC
Confidence 47899999999999999998874 46889999999999888876421 1 577766431 113589999764
Q ss_pred cccc
Q 026688 141 AIHC 144 (235)
Q Consensus 141 ~l~~ 144 (235)
-+..
T Consensus 80 PCQ~ 83 (327)
T 2c7p_A 80 PCQA 83 (327)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 4433
No 313
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.97 E-value=0.0024 Score=50.27 Aligned_cols=62 Identities=11% Similarity=0.039 Sum_probs=52.5
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 108 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 108 (235)
+-+..+++.+++... .++..|||.-||+|..+....+.+. +++|+|+++...+.+++++...
T Consensus 236 ~kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 236 RFPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred cCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 445678888887654 4578999999999999999988876 9999999999999999988654
No 314
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.94 E-value=0.0031 Score=49.50 Aligned_cols=61 Identities=21% Similarity=0.327 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCH---HHHHHHHHHhhh
Q 026688 44 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE---NMLKQCYEFVQQ 107 (235)
Q Consensus 44 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~---~~~~~a~~~~~~ 107 (235)
+-+..+++.++.... .++..|||.-||+|..+....+.+. +++|+|+++ ..++.+++++..
T Consensus 226 ~kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 226 QKPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp CCCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHH
Confidence 456788888887765 4578999999999999999998876 999999999 999999998764
No 315
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.78 E-value=0.0056 Score=49.84 Aligned_cols=63 Identities=8% Similarity=-0.019 Sum_probs=48.8
Q ss_pred CCCCCeEEEecCCCchHHHHHH-HcCCC-ceEEEEeCCHHHHHHHHHHhhh--cCCCCC-CCeeEEeccc
Q 026688 59 PVLGGNIIDASCGSGLFSRIFA-KSGLF-SLVVALDYSENMLKQCYEFVQQ--ESNFPK-ENFLLVRADI 123 (235)
Q Consensus 59 ~~~~~~vLdiG~G~G~~~~~l~-~~~~~-~~v~~~D~s~~~~~~a~~~~~~--~~~~~~-~~~~~~~~d~ 123 (235)
..++..++|+|++.|..+..++ +..+. .+|+++|++|...+..++++.. ++. . .+++++..-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~--~~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTN--FASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTST--TGGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccC--CCCCEEEEEeEE
Confidence 3568999999999999999888 45543 6999999999999999998876 221 2 4666655444
No 316
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.70 E-value=0.012 Score=47.23 Aligned_cols=101 Identities=14% Similarity=0.135 Sum_probs=65.4
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc----C-CC
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----L-PF 128 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~----~-~~ 128 (235)
+.....++.+||.+|+|. |..+..+++..--..|+++|.+++-++.+++.-. . .++..+-.+ + ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa--------~-~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA--------T-HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC--------S-EEEETTTSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC--------C-EEecCCccCHHHHHHHh
Confidence 445566789999999986 7777777775321269999999998888865311 1 112111111 0 11
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
..+.+|+|+-... ....+..+.++|+|+|++++...
T Consensus 255 ~~gg~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 255 TDGGVNFALESTG------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp TTSCEEEEEECSC------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCCCcEEEECCC------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 1237999984332 12467889999999999987654
No 317
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.70 E-value=0.025 Score=42.73 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=70.8
Q ss_pred CCeEEEecCCCchHHHHHHHc-------CCCceEEEEe-----CCHH-------------------HHHHHHHHh-----
Q 026688 62 GGNIIDASCGSGLFSRIFAKS-------GLFSLVVALD-----YSEN-------------------MLKQCYEFV----- 105 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~-------~~~~~v~~~D-----~s~~-------------------~~~~a~~~~----- 105 (235)
++.|+|+|+-.|..+..++.. ++..+++++| +.+. ..+..++.+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 689999999999988876542 3567999999 2210 011112111
Q ss_pred -hhcCCCCCCCeeEEecccccC-C-----CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 106 -QQESNFPKENFLLVRADISRL-P-----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 106 -~~~~~~~~~~~~~~~~d~~~~-~-----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
...+.. ..+++++.+++.+. | .+...+|++.+..-. .......+..+...|+|||.|++-+..
T Consensus 150 ~~~~g~~-~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHV-TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTS-CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCC-CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 112211 26899999999763 2 234579999976632 223346788999999999999987754
No 318
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.64 E-value=0.011 Score=51.59 Aligned_cols=129 Identities=16% Similarity=0.145 Sum_probs=79.8
Q ss_pred CCCeEEEecCCCchHHHHHHHcC-------C-----CceEEEEeC---CHHHHHHHH-----------HHhhhcCC----
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSG-------L-----FSLVVALDY---SENMLKQCY-----------EFVQQESN---- 110 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~-------~-----~~~v~~~D~---s~~~~~~a~-----------~~~~~~~~---- 110 (235)
+.-+|+|+|.|+|.....+.+.. | ...++.+|. +.+.+..+- +.+..+..
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 35699999999998877664431 1 256899998 444444322 22222211
Q ss_pred -------CCCCCeeEEeccccc-CC-CC---CCceeEEEecccccccCCh----HHHHHHHHHhccCCcEEEEEEeccCC
Q 026688 111 -------FPKENFLLVRADISR-LP-FA---SSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDG 174 (235)
Q Consensus 111 -------~~~~~~~~~~~d~~~-~~-~~---~~~~D~i~~~~~l~~~~~~----~~~l~~~~~~L~pgG~li~~~~~~~~ 174 (235)
.....+++..+|+.+ ++ +. ...+|+++....--. .+| ..++..+.++++|||.+.- ..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~-~np~~w~~~~~~~l~~~~~~g~~~~t--~~--- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPA-KNPDMWNEQLFNAMARMTRPGGTFST--FT--- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEE--SC---
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCC-CChhhhhHHHHHHHHHHhCCCCEEEe--cc---
Confidence 001245667778754 22 21 367999997653322 222 5789999999999997652 11
Q ss_pred CcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 175 PFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
....+++.|.++||.+.+...
T Consensus 212 -------------------------~~~~vr~~l~~aGf~~~~~~~ 232 (689)
T 3pvc_A 212 -------------------------AAGFVRRGLQQAGFNVTKVKG 232 (689)
T ss_dssp -------------------------CCHHHHHHHHHTTCEEEEEEC
T ss_pred -------------------------CcHHHHHHHHhCCeEEEeccC
Confidence 224678888999998766553
No 319
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.62 E-value=0.04 Score=47.83 Aligned_cols=128 Identities=15% Similarity=0.095 Sum_probs=78.8
Q ss_pred CCeEEEecCCCchHHHHHHHcC------------CCceEEEEeC---CHHHHHHHHH-----------HhhhcCCC----
Q 026688 62 GGNIIDASCGSGLFSRIFAKSG------------LFSLVVALDY---SENMLKQCYE-----------FVQQESNF---- 111 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~------------~~~~v~~~D~---s~~~~~~a~~-----------~~~~~~~~---- 111 (235)
.-+|||+|.|+|.+.....+.. ....++++|. +.+.+..+-. ....+...
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 4689999999998766554431 1246899998 6666653332 22222110
Q ss_pred -------CCCCeeEEeccccc-CC-CC---CCceeEEEecccccccCCh----HHHHHHHHHhccCCcEEEEEEeccCCC
Q 026688 112 -------PKENFLLVRADISR-LP-FA---SSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGP 175 (235)
Q Consensus 112 -------~~~~~~~~~~d~~~-~~-~~---~~~~D~i~~~~~l~~~~~~----~~~l~~~~~~L~pgG~li~~~~~~~~~ 175 (235)
....+++..+|+.+ ++ +. ...+|+|+....-. -.+| ..+++.+.++++|||.+... .
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~--~---- 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP-AKNPDMWTQNLFNAMARLARPGGTLATF--T---- 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG-GGCGGGSCHHHHHHHHHHEEEEEEEEES--C----
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCC-cCChhhhhHHHHHHHHHHhCCCCEEEec--c----
Confidence 01224456666644 22 11 36799999755332 2234 47899999999999987631 1
Q ss_pred cccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCCceeEEEe
Q 026688 176 FNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR 220 (235)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 220 (235)
....+++.|.++||.+.+...
T Consensus 220 ------------------------~~~~vr~~L~~aGf~v~~~~~ 240 (676)
T 3ps9_A 220 ------------------------SAGFVRRGLQDAGFTMQKRKG 240 (676)
T ss_dssp ------------------------CCHHHHHHHHHHTCEEEEEEC
T ss_pred ------------------------CcHHHHHHHHhCCeEEEeccc
Confidence 124678888999998766553
No 320
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.61 E-value=0.049 Score=43.58 Aligned_cols=105 Identities=15% Similarity=0.142 Sum_probs=66.6
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-C-C---C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L-P---F 128 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~-~---~ 128 (235)
......++.+||-.|+|. |..+..+++..--..|+++|.++.-++.+++.=... -+.....|..+ . . .
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~------vi~~~~~~~~~~i~~~~~~ 249 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA------TVDPSAGDVVEAIAGPVGL 249 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE------EECTTSSCHHHHHHSTTSS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE------EECCCCcCHHHHHHhhhhc
Confidence 445666789999999976 777777877643238999999998888877631100 01100111111 0 0 1
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
..+.+|+|+-... ....+..+.++|++||.+++....
T Consensus 250 ~~gg~Dvvid~~G------~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 250 VPGGVDVVIECAG------VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp STTCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred cCCCCCEEEECCC------CHHHHHHHHHHhccCCEEEEEecc
Confidence 2247999995322 135688899999999999886543
No 321
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.51 E-value=0.029 Score=45.36 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=67.3
Q ss_pred cCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-----C-C-C
Q 026688 57 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-----L-P-F 128 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-----~-~-~ 128 (235)
....++.+||-+|+|. |.++..+++..--..|+++|.+++-++.+++. + ...+...-.+ + . .
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----G------a~~i~~~~~~~~~~~v~~~t 250 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----G------FEIADLSLDTPLHEQIAALL 250 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----T------CEEEETTSSSCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----C------CcEEccCCcchHHHHHHHHh
Confidence 3556789999999876 78888888764223799999999888888652 1 1222111101 0 0 1
Q ss_pred CCCceeEEEeccccc---------ccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 129 ASSSIDAVHAGAAIH---------CWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~---------~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
....+|+|+-...-. |.+++...+..+.++|++||.+++..
T Consensus 251 ~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 251 GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 124699999654321 22344457889999999999998754
No 322
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.40 E-value=0.026 Score=40.77 Aligned_cols=96 Identities=18% Similarity=0.215 Sum_probs=60.0
Q ss_pred hhcCCCCCCeEEEecC--CCchHHHHHHH-cCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----
Q 026688 55 GYLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---- 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~-~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---- 127 (235)
+.....++++||..|+ |.|.....+++ .+ ++|+++|.+++.++.+++ .+ . .. . .|..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~----~g---~-~~-~--~d~~~~~~~~~ 98 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSR----LG---V-EY-V--GDSRSVDFADE 98 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHT----TC---C-SE-E--EETTCSTHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH----cC---C-CE-E--eeCCcHHHHHH
Confidence 3345566889999995 34655555554 34 489999999887766643 11 1 11 1 1222110
Q ss_pred ----CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 ----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+++.+.. ...+..+.+.|+|+|.++....
T Consensus 99 ~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 99 ILELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HHHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 11246999996432 1457889999999999987654
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.39 E-value=0.017 Score=45.80 Aligned_cols=94 Identities=14% Similarity=0.126 Sum_probs=64.3
Q ss_pred cCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeE
Q 026688 57 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDA 135 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 135 (235)
....++.+||-+|+|. |..+..+++.. .++|+++|.+++-++.+++. + . . .++ .+.... . ..+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G---a-~-~v~-~~~~~~--~-~~~D~ 237 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM----G---V-K-HFY-TDPKQC--K-EELDF 237 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT----T---C-S-EEE-SSGGGC--C-SCEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc----C---C-C-eec-CCHHHH--h-cCCCE
Confidence 4666789999999976 77777777764 45999999999888877652 1 1 1 122 333222 2 27999
Q ss_pred EEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 136 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 136 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
|+-...-. ..+..+.++|+|+|.+++...
T Consensus 238 vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 238 IISTIPTH------YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEECCCSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCcH------HHHHHHHHHHhcCCEEEEECC
Confidence 98533221 247788999999999998654
No 324
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.37 E-value=0.051 Score=43.92 Aligned_cols=106 Identities=16% Similarity=0.115 Sum_probs=66.7
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC------C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL------P 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~------~ 127 (235)
......++.+||.+|+|. |..+..+++...-.+|+++|.++..++.+++. + ..++..+-.+. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G------a~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----G------FETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----T------CEEEETTSSSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C------CcEEcCCCcchHHHHHHH
Confidence 334566789999999986 88888887764222899999999888877642 1 12222111111 0
Q ss_pred -CCCCceeEEEeccccccc--------CChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 -FASSSIDAVHAGAAIHCW--------SSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~--------~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+|+-...-... .++...+..+.++|+++|++++...
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred HhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 112369999965432210 0123468889999999999886543
No 325
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.32 E-value=0.029 Score=44.57 Aligned_cols=100 Identities=15% Similarity=0.173 Sum_probs=65.9
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-----C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----P 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~ 127 (235)
......++.+||-+|+|. |.++..+++.. .+ +|+++|.++.-++.+++.=. . .++..+-.+. .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa--------~-~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGA--------T-DIINYKNGDIVEQILK 229 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTC--------C-EEECGGGSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCC--------c-eEEcCCCcCHHHHHHH
Confidence 445667789999999976 77777887764 34 79999999988888876311 1 1211111110 0
Q ss_pred -CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+|+-...- ...+..+.++|+|+|.++....
T Consensus 230 ~t~g~g~D~v~d~~g~------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 230 ATDGKGVDKVVIAGGD------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp HTTTCCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HcCCCCCCEEEECCCC------hHHHHHHHHHHhcCCEEEEecc
Confidence 123469999943221 2457889999999999987653
No 326
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.32 E-value=0.14 Score=40.13 Aligned_cols=139 Identities=17% Similarity=0.249 Sum_probs=84.0
Q ss_pred CeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC-CCCceeEEEeccc
Q 026688 63 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-ASSSIDAVHAGAA 141 (235)
Q Consensus 63 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~i~~~~~ 141 (235)
.+|||+-||.|.++.-+.+.+- ..+.++|+++...+..+.+.. ..+...|+.++.. .-...|+++...-
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~~---------~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNHS---------AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHCC---------SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred CeEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHCC---------CCcccCChhhCCHhhCCcccEEEecCC
Confidence 4799999999999999988874 357799999988888776532 2467788887642 1246899986544
Q ss_pred cccc---------CChH-HHHH---HHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHH
Q 026688 142 IHCW---------SSPS-TGVA---EISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 208 (235)
Q Consensus 142 l~~~---------~~~~-~~l~---~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (235)
+..+ .|+. .++. ++.+.++|. + ++.+.... .. .....-....+.+.|
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~-~~~ENV~g----l~--------------~~~~~~~~~~i~~~l 130 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-F-FLAENVKG----MM--------------AQRHNKAVQEFIQEF 130 (331)
T ss_dssp GGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-E-EEEEECCG----GG--------------GCTTSHHHHHHHHHH
T ss_pred CCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-E-EEeeeecc----cc--------------cccccchhhhhhhhh
Confidence 3332 2332 2333 445556784 3 33333221 00 000011235677788
Q ss_pred HHcCCceeEEE---------eeCcEEEEEEec
Q 026688 209 RACGLVDFKCT---------RNRGFVMFTATK 231 (235)
Q Consensus 209 ~~~Gf~~~~~~---------~~~~~~~~~~~k 231 (235)
++.|+.+.... .....+++++.|
T Consensus 131 ~~~GY~v~~~vlna~~yGvPQ~R~Rvfivg~r 162 (331)
T 3ubt_Y 131 DNAGYDVHIILLNANDYGVAQDRKRVFYIGFR 162 (331)
T ss_dssp HHHTEEEEEEEEEGGGTTCSBCCEEEEEEEEE
T ss_pred ccCCcEEEEEecccccCCCCcccceEEEEEEc
Confidence 89999764443 222346666665
No 327
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.27 E-value=0.042 Score=45.54 Aligned_cols=76 Identities=17% Similarity=0.155 Sum_probs=53.9
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC-------------
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF------------- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~------------- 128 (235)
..+++|+-||.|.++.-+.+.+. ..+.++|+++...+..+.+... .+...+++.|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~DI~~i~~~~~~~~~~~~~~~ 161 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYC-----DPATHHFNEDIRDITLSHQEGVSDEAAAE 161 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCC-----CTTTCEEESCTHHHHCTTCTTSCHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhccc-----CCCcceeccchhhhhhccccccchhhHHh
Confidence 46899999999999999988764 3588999999888877776522 1234567788765421
Q ss_pred ----CCCceeEEEeccccc
Q 026688 129 ----ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 ----~~~~~D~i~~~~~l~ 143 (235)
....+|+++...-+.
T Consensus 162 ~i~~~~~~~Dvl~gGpPCQ 180 (482)
T 3me5_A 162 HIRQHIPEHDVLLAGFPCQ 180 (482)
T ss_dssp HHHHHSCCCSEEEEECCCC
T ss_pred hhhhcCCCCCEEEecCCCc
Confidence 113589988654443
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.24 E-value=0.049 Score=43.43 Aligned_cols=100 Identities=14% Similarity=0.148 Sum_probs=65.7
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 127 (235)
+.....++.+||-+|+|. |..+..+++.. .++|+++|.++.-++.+++. + . . .++..+..+..
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G---a-~-~vi~~~~~~~~~~v~~~ 252 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL----G---A-D-HGINRLEEDWVERVYAL 252 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----T---C-S-EEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc----C---C-C-EEEcCCcccHHHHHHHH
Confidence 445566789999999876 77777777754 45999999999888887653 1 1 1 12221111110
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.....+|+|+-... ...+..+.++|+|+|.+++....
T Consensus 253 ~~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 253 TGDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp HTTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEecC
Confidence 12347999985433 12367788999999999987543
No 329
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.23 E-value=0.047 Score=43.38 Aligned_cols=99 Identities=18% Similarity=0.232 Sum_probs=64.4
Q ss_pred hcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc------cc-cC
Q 026688 56 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD------IS-RL 126 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d------~~-~~ 126 (235)
.....++.+||-+|+|. |..+..+++.. .+ +|+++|.++.-++.+++. + . . .++..+ .. .+
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l----G---a-~-~vi~~~~~~~~~~~~~i 235 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEI----G---A-D-LVLQISKESPQEIARKV 235 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT----T---C-S-EEEECSSCCHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh----C---C-C-EEEcCcccccchHHHHH
Confidence 34566789999999976 77788887764 34 899999999888877642 1 1 1 122211 10 00
Q ss_pred -CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 127 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 127 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
......+|+|+-... . ...+..+.++|+|+|.++....
T Consensus 236 ~~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 236 EGQLGCKPEVTIECTG-----A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHHTSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHHhCCCCCEEEECCC-----C-hHHHHHHHHHhcCCCEEEEEec
Confidence 000146899984322 1 2457888999999999987654
No 330
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.18 E-value=0.031 Score=44.09 Aligned_cols=100 Identities=15% Similarity=0.158 Sum_probs=65.5
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC--C--C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--F--A 129 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--~--~ 129 (235)
......++.+||-.|+|. |..+..+++.. .++|+++|.+++-++.+++. + .. .++..+-.+.. . .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G----a~-~~i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL----G----AE-VAVNARDTDPAAWLQKE 229 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc----C----CC-EEEeCCCcCHHHHHHHh
Confidence 344566789999999976 88888888764 45999999999988887652 1 11 11111111110 0 1
Q ss_pred CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 130 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+.+|+|+.... ....++.+.++|+|+|.+++...
T Consensus 230 ~g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 230 IGGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp HSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 136888885322 23568889999999999987643
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.17 E-value=0.055 Score=43.86 Aligned_cols=99 Identities=14% Similarity=0.050 Sum_probs=61.7
Q ss_pred CCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-----C-CCC
Q 026688 58 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----P-FAS 130 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~-~~~ 130 (235)
...++.+||-+|+|. |..+..+++...-..|+++|.++.-++.+++.=. . .++..+-.+. . ...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa--------~-~vi~~~~~~~~~~i~~~t~g 280 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA--------D-HVIDPTKENFVEAVLDYTNG 280 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC--------S-EEECTTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC--------C-EEEcCCCCCHHHHHHHHhCC
Confidence 456688999999975 7777777776532389999999988888876311 1 1111111110 0 123
Q ss_pred CceeEEEecccccccCChHHHHHHHHHhc----cCCcEEEEEEe
Q 026688 131 SSIDAVHAGAAIHCWSSPSTGVAEISRVL----RPGGVFVGTTY 170 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L----~pgG~li~~~~ 170 (235)
..+|+|+- ....+...+..+.+.| +++|.+++...
T Consensus 281 ~g~D~vid-----~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 281 LGAKLFLE-----ATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCCSEEEE-----CSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCCEEEE-----CCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 46999984 3333333455555555 99999998654
No 332
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.03 E-value=0.085 Score=41.45 Aligned_cols=97 Identities=19% Similarity=0.209 Sum_probs=62.3
Q ss_pred cCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------C
Q 026688 57 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------F 128 (235)
Q Consensus 57 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------~ 128 (235)
....++.+||-.|+ | .|..+..+++.. .++|++++.+++-++.+++. + .. .++..+-.+.. .
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g----a~-~~~~~~~~~~~~~~~~~~ 213 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY----G----AE-YLINASKEDILRQVLKFT 213 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T----CS-EEEETTTSCHHHHHHHHT
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C----Cc-EEEeCCCchHHHHHHHHh
Confidence 35567899999994 3 477777777653 45999999999888877652 1 11 12211111110 1
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
....+|+|+.+..- ..+..+.++|+++|.++....
T Consensus 214 ~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 214 NGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp TTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 23469999964432 347788899999999988643
No 333
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.02 E-value=0.026 Score=45.20 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=62.5
Q ss_pred cCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-C-CCCCCce
Q 026688 57 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L-PFASSSI 133 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~~ 133 (235)
....++.+||-+|+|. |..+..+++.. .++|+++|.+++-++.+++. . . . .++...-.+ . ... +.+
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l-G------a-~-~vi~~~~~~~~~~~~-~g~ 258 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL-G------A-D-EVVNSRNADEMAAHL-KSF 258 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-T------C-S-EEEETTCHHHHHTTT-TCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-C------C-c-EEeccccHHHHHHhh-cCC
Confidence 3556789999999975 77777777754 35899999999888888752 1 1 1 111111101 0 111 579
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
|+|+....-. ..+..+.++|+|+|.++....
T Consensus 259 Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 259 DFILNTVAAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EEEEECCSSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CEEEECCCCH------HHHHHHHHHhccCCEEEEecc
Confidence 9998543321 236778899999999887543
No 334
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.02 E-value=0.094 Score=41.73 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=67.8
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCce-EEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe-----ccccc-C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQESNFPKENFLLVR-----ADISR-L 126 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-----~d~~~-~ 126 (235)
......++.+||-+|+|. |..+..+++.. .++ |+++|.+++-++.+++. .. .-+.+.. .|+.+ .
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~------~~~~~~~~~~~~~~~~~~v 244 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CP------EVVTHKVERLSAEESAKKI 244 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CT------TCEEEECCSCCHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-ch------hcccccccccchHHHHHHH
Confidence 344566789999999976 77777887764 345 99999999999988875 31 1222221 11111 0
Q ss_pred --CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 127 --PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 127 --~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
......+|+|+-... ....+..+.++|+++|.+++....
T Consensus 245 ~~~t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 245 VESFGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp HHHTSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECCCC
T ss_pred HHHhCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEccC
Confidence 012357999995322 224578899999999999986543
No 335
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.01 E-value=0.13 Score=40.59 Aligned_cols=103 Identities=16% Similarity=0.067 Sum_probs=64.4
Q ss_pred HhhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----
Q 026688 54 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 127 (235)
Q Consensus 54 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 127 (235)
.......++.+||-.|+|. |.++..+++..-...++++|.++.-++.+++. + -..++...-.+.+
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----G-----a~~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----G-----AMQTFNSSEMSAPQMQSV 223 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----T-----CSEEEETTTSCHHHHHHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----C-----CeEEEeCCCCCHHHHHHh
Confidence 3445566789999999976 56666666654334678999999888887762 1 1112211111100
Q ss_pred -CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 128 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.....+|+|+.... ....++.+.+++++||.+++....
T Consensus 224 ~~~~~g~d~v~d~~G------~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 224 LRELRFNQLILETAG------VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp HGGGCSSEEEEECSC------SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred hcccCCccccccccc------ccchhhhhhheecCCeEEEEEecc
Confidence 12245788774322 235678889999999999876543
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.98 E-value=0.37 Score=41.96 Aligned_cols=156 Identities=10% Similarity=0.150 Sum_probs=90.5
Q ss_pred CCCeEEEecCCCchHHHHHHHcCC------CceEEEEeCC-HHHHHHHHHHhhhcC-------------CC--------C
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGL------FSLVVALDYS-ENMLKQCYEFVQQES-------------NF--------P 112 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~------~~~v~~~D~s-~~~~~~a~~~~~~~~-------------~~--------~ 112 (235)
+...|+-+|||.-.....+....+ ...+..+|++ |+.++.=++.+...+ .. .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 467899999999888887765533 1245555555 445554444443111 00 0
Q ss_pred CCCeeEEecccccCC----------C-CCCceeEEEecccccccCCh--HHHHHHHHHhccCCcEEEEEEeccCCCcccc
Q 026688 113 KENFLLVRADISRLP----------F-ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLI 179 (235)
Q Consensus 113 ~~~~~~~~~d~~~~~----------~-~~~~~D~i~~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~ 179 (235)
..+..++..|+.+.. + .....-++++=.++.+++.. .++++.+.+. |+|.+++.+..... ....
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~-~~~d 263 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPK-GPFE 263 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTT-CTTS
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCC-CCCC
Confidence 136788899997631 1 23344556666777777644 4777777754 66777665654321 1223
Q ss_pred hhHHHHHHhHhhc----CCceeecCHHHHHHHHHHcCCceeEEE
Q 026688 180 PFSRLLRQNMMQI----SGSYTFLSEREIEDLCRACGLVDFKCT 219 (235)
Q Consensus 180 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 219 (235)
++.......+... .....+.+.++..+.|.++||..+...
T Consensus 264 ~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 264 PFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVG 307 (695)
T ss_dssp HHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCccee
Confidence 3433333333221 222345679999999999999865544
No 337
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.96 E-value=0.058 Score=43.26 Aligned_cols=102 Identities=17% Similarity=0.134 Sum_probs=65.1
Q ss_pred HhhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc-----ccc-C
Q 026688 54 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD-----ISR-L 126 (235)
Q Consensus 54 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d-----~~~-~ 126 (235)
.......++.+||-+|+|. |..+..+++..--.+|+++|.++.-++.+++. + . ..++... +.+ .
T Consensus 186 ~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l----G---a--~~vi~~~~~~~~~~~~i 256 (378)
T 3uko_A 186 WNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF----G---V--NEFVNPKDHDKPIQEVI 256 (378)
T ss_dssp HTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT----T---C--CEEECGGGCSSCHHHHH
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C---C--cEEEccccCchhHHHHH
Confidence 3445566789999999975 77777777764223799999999888877642 1 1 1122111 110 0
Q ss_pred -CCCCCceeEEEecccccccCChHHHHHHHHHhccCC-cEEEEEEe
Q 026688 127 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 170 (235)
Q Consensus 127 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pg-G~li~~~~ 170 (235)
....+.+|+|+-... . ...+..+.++|++| |.+++...
T Consensus 257 ~~~~~gg~D~vid~~g-----~-~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 257 VDLTDGGVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHHTTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHhcCCCCCEEEECCC-----C-HHHHHHHHHHhhccCCEEEEEcc
Confidence 011237999984322 2 24578899999997 99987654
No 338
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.92 E-value=0.055 Score=41.88 Aligned_cols=72 Identities=11% Similarity=0.069 Sum_probs=54.0
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCce-EEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC---CC-CCceeE
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FA-SSSIDA 135 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~---~~-~~~~D~ 135 (235)
...+++|+-||.|.++..+.+.+.... +.++|+++...+..+.+. +...+...|+.++. ++ ...+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~--------~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH--------QGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT--------TTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC--------CCCceeCCChHHccHHHhcccCCcCE
Confidence 367999999999999999998876444 699999999887776653 23456788887753 11 136899
Q ss_pred EEecc
Q 026688 136 VHAGA 140 (235)
Q Consensus 136 i~~~~ 140 (235)
++...
T Consensus 87 l~ggp 91 (295)
T 2qrv_A 87 VIGGS 91 (295)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99754
No 339
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.90 E-value=0.075 Score=42.37 Aligned_cols=93 Identities=14% Similarity=0.160 Sum_probs=61.0
Q ss_pred CCCeEEEec-CCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec--cccc-C-CCCCCcee
Q 026688 61 LGGNIIDAS-CGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA--DISR-L-PFASSSID 134 (235)
Q Consensus 61 ~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~--d~~~-~-~~~~~~~D 134 (235)
++.+||-.| +|. |..+..+++....++|+++|.+++-++.+++. + . . .++.. |..+ . ....+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l----G---a-d-~vi~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL----G---A-H-HVIDHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT----T---C-S-EEECTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc----C---C-C-EEEeCCCCHHHHHHHhcCCCce
Confidence 578899998 554 88888888862245999999999888887652 1 1 1 11111 1111 0 12235799
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEE
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~ 168 (235)
+|+.... ....+..+.++|+|+|.+++.
T Consensus 242 vvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 9884322 234678899999999999876
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.89 E-value=0.12 Score=40.92 Aligned_cols=99 Identities=16% Similarity=0.127 Sum_probs=63.5
Q ss_pred hcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc-ccC----C--
Q 026688 56 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SRL----P-- 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~----~-- 127 (235)
.....++.+||-+|+|. |..+..+++.. .++|+++|.+++-++.+++. + . . .++..+- .+. .
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l----G---a-~-~~~~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC----G---A-D-VTLVVDPAKEEESSIIER 232 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT----T---C-S-EEEECCTTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh----C---C-C-EEEcCcccccHHHHHHHH
Confidence 34566789999999875 77777777753 34799999999888887642 1 1 1 1221110 111 0
Q ss_pred CC---CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 FA---SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ~~---~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.. ...+|+|+.... ....+..+.++|+|+|.++....
T Consensus 233 ~~~~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSG------NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHSSSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred hccccCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEec
Confidence 11 246899984332 12457888999999999987654
No 341
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.88 E-value=0.062 Score=42.19 Aligned_cols=97 Identities=9% Similarity=-0.041 Sum_probs=61.7
Q ss_pred hhcCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-CC----
Q 026688 55 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP---- 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~---- 127 (235)
+.....++++||..|+ |.|..+..+++.. .++|+++|.+++.++.+++ +. . ... .|..+ ..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~-~g------~-~~~---~d~~~~~~~~~~ 206 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQ-IG------F-DAA---FNYKTVNSLEEA 206 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TT------C-SEE---EETTSCSCHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-cC------C-cEE---EecCCHHHHHHH
Confidence 4445667899999998 4466666555542 3489999999888877733 21 1 111 12221 00
Q ss_pred ---CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ---~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
...+.+|+++.+..- ..+..+.++|+++|.+++...
T Consensus 207 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 207 LKKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 112469999865442 347888899999999987543
No 342
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.80 E-value=0.074 Score=41.63 Aligned_cols=99 Identities=12% Similarity=0.011 Sum_probs=63.3
Q ss_pred hcCCCCCCeEEEec-CC-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC------C
Q 026688 56 YLKPVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL------P 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~------~ 127 (235)
.....++.+||-.| +| .|..+..+++.. .++|++++.+++-++.+++.- ... ++..+-.+. .
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~G--------a~~-~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKALG--------AWE-TIDYSHEDVAKRVLEL 204 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHT--------CSE-EEETTTSCHHHHHHHH
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcC--------CCE-EEeCCCccHHHHHHHH
Confidence 34556789999998 34 477777776653 349999999998888877531 111 111111111 0
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.....+|+|+.+..- ..+..+.++|+++|.++.....
T Consensus 205 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp TTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred hCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 123479999854332 3477889999999999886543
No 343
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.76 E-value=0.03 Score=43.70 Aligned_cols=93 Identities=9% Similarity=0.012 Sum_probs=60.1
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCce
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 133 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 133 (235)
......++.+||-.|+|. |..+..+++.. .++|++++ +++-++.+++.=. -.++ .|..++ .+.+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa---------~~v~-~d~~~v---~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGV---------RHLY-REPSQV---TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTE---------EEEE-SSGGGC---CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCC---------CEEE-cCHHHh---CCCc
Confidence 445566789999999964 77777777753 34999999 8888888766311 1122 242222 4679
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
|+|+-...-. .+..+.++|+|+|.++...
T Consensus 201 Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 201 FAIFDAVNSQ-------NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEEC
T ss_pred cEEEECCCch-------hHHHHHHHhcCCCEEEEEe
Confidence 9998432211 2356789999999998863
No 344
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.76 E-value=0.1 Score=41.71 Aligned_cols=101 Identities=14% Similarity=0.094 Sum_probs=64.1
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc-----ccc-C-
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD-----ISR-L- 126 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d-----~~~-~- 126 (235)
......++.+||-+|+|. |..+..+++..--.+|+++|.+++-++.+++. + . . .++..+ +.+ .
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G---a-~-~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL----G---A-T-ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT----T---C-S-EEECGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C---C-c-EEEecccccchHHHHHH
Confidence 445566789999999875 77777777754222799999999888887642 1 1 1 111111 111 0
Q ss_pred CCCCCceeEEEecccccccCChHHHHHHHHHhccCC-cEEEEEEe
Q 026688 127 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 170 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pg-G~li~~~~ 170 (235)
....+.+|+|+-...- ...+..+.++|+++ |.++....
T Consensus 256 ~~t~gg~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 256 EKTNGGVDYAVECAGR------IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHhCCCCCEEEECCCC------HHHHHHHHHHHhcCCCEEEEEcc
Confidence 0112379999843221 24578899999999 99987553
No 345
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=95.75 E-value=0.12 Score=40.74 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=62.0
Q ss_pred hcCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-C-C-CCCC
Q 026688 56 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L-P-FASS 131 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~-~-~~~~ 131 (235)
.....++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++.-.. .-+.....|..+ . . ....
T Consensus 158 ~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~------~~i~~~~~~~~~~v~~~t~g~ 231 (348)
T 4eez_A 158 VSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGAD------VTINSGDVNPVDEIKKITGGL 231 (348)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCS------EEEEC-CCCHHHHHHHHTTSS
T ss_pred ccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCe------EEEeCCCCCHHHHhhhhcCCC
Confidence 34566789999999987 44555555544356999999999877777653211 011111122211 0 0 1223
Q ss_pred ceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 132 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+|.++.... ....+....++++++|.+++...
T Consensus 232 g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 232 GVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp CEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 5676664221 23567889999999999887643
No 346
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.70 E-value=0.14 Score=41.00 Aligned_cols=100 Identities=18% Similarity=0.171 Sum_probs=64.0
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc-----ccc-C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD-----ISR-L 126 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d-----~~~-~ 126 (235)
......++.+||-+|+|. |..+..+++.. .+ +|+++|.++.-++.+++. + . . .++... +.+ .
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l----G---a-~-~vi~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVF----G---A-T-DFVNPNDHSEPISQVL 255 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT----T---C-C-EEECGGGCSSCHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHh----C---C-c-eEEeccccchhHHHHH
Confidence 344556789999999875 77777777764 34 799999999888887642 1 1 1 111111 110 0
Q ss_pred -CCCCCceeEEEecccccccCChHHHHHHHHHhccCC-cEEEEEEe
Q 026688 127 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 170 (235)
Q Consensus 127 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pg-G~li~~~~ 170 (235)
....+.+|+|+-.... ...+..+.++|+++ |.+++...
T Consensus 256 ~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 256 SKMTNGGVDFSLECVGN------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHHTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHhCCCCCEEEECCCC------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 0112368999843221 24578899999999 99887543
No 347
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.66 E-value=0.092 Score=42.13 Aligned_cols=100 Identities=22% Similarity=0.255 Sum_probs=63.9
Q ss_pred hcC-CCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc------ccc-C
Q 026688 56 YLK-PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD------ISR-L 126 (235)
Q Consensus 56 ~~~-~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d------~~~-~ 126 (235)
... ..++.+||-+|+|. |..+..+++..--.+|+++|.+++-++.+++. + . . .++..+ +.+ .
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----G---a-~-~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI----G---A-D-LTLNRRETSVEERRKAI 259 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT----T---C-S-EEEETTTSCHHHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc----C---C-c-EEEeccccCcchHHHHH
Confidence 345 56789999999775 77777777764214999999999888887642 1 1 1 122211 111 1
Q ss_pred -C-CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 127 -P-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 127 -~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
. .....+|+|+-.... ...+..+.++|+++|.++....
T Consensus 260 ~~~~~g~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 260 MDITHGRGADFILEATGD------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHTTTSCEEEEEECSSC------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHHhCCCCCcEEEECCCC------HHHHHHHHHHHhcCCEEEEEec
Confidence 0 112369999854321 2357888999999999887643
No 348
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.66 E-value=0.14 Score=40.91 Aligned_cols=100 Identities=13% Similarity=0.110 Sum_probs=64.1
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc-----ccc-C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD-----ISR-L 126 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d-----~~~-~ 126 (235)
......++.+||-+|+|. |..+..+++.. .+ +|+++|.+++-++.+++. + . . .++..+ +.+ .
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l----G---a-~-~vi~~~~~~~~~~~~v 258 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKAL----G---A-T-DCLNPRELDKPVQDVI 258 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT----T---C-S-EEECGGGCSSCHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh----C---C-c-EEEccccccchHHHHH
Confidence 344566789999999875 77777777764 34 799999999888877642 1 1 1 111111 110 0
Q ss_pred -CCCCCceeEEEecccccccCChHHHHHHHHHhccCC-cEEEEEEe
Q 026688 127 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 170 (235)
Q Consensus 127 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pg-G~li~~~~ 170 (235)
....+.+|+|+-... . ...+..+.++|+++ |.+++...
T Consensus 259 ~~~~~~g~Dvvid~~G-----~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 259 TELTAGGVDYSLDCAG-----T-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHHTSCBSEEEESSC-----C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHhCCCccEEEECCC-----C-HHHHHHHHHHhhcCCCEEEEECC
Confidence 011236899984322 1 24578899999999 99987544
No 349
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.65 E-value=0.15 Score=40.71 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=63.8
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc-----ccc-C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD-----ISR-L 126 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d-----~~~-~ 126 (235)
......++.+||-+|+|. |..+..+++.. .+ +|+++|.+++-++.+++. + . . .++..+ +.+ .
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l----G---a-~-~vi~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEV----G---A-T-ECVNPQDYKKPIQEVL 254 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT----T---C-S-EEECGGGCSSCHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh----C---C-c-eEecccccchhHHHHH
Confidence 344556789999999875 77777777764 34 799999999888887642 1 1 1 111111 110 0
Q ss_pred -CCCCCceeEEEecccccccCChHHHHHHHHHhccCC-cEEEEEEe
Q 026688 127 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 170 (235)
Q Consensus 127 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pg-G~li~~~~ 170 (235)
....+.+|+|+-... . ...+..+.++|+++ |.+++...
T Consensus 255 ~~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 255 TEMSNGGVDFSFEVIG-----R-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp HHHTTSCBSEEEECSC-----C-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred HHHhCCCCcEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEecc
Confidence 011236899984322 1 24578899999999 99887543
No 350
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.59 E-value=0.075 Score=41.79 Aligned_cols=100 Identities=11% Similarity=-0.016 Sum_probs=63.8
Q ss_pred hhcCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-----C
Q 026688 55 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----P 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~ 127 (235)
+.....++.+||-.|+ |.|..+..+++.. .++|++++.+++-++.+.+.+. . . .++...-.+. .
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g------~-~-~~~~~~~~~~~~~~~~ 213 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELG------F-D-GAIDYKNEDLAAGLKR 213 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC------C-S-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcC------C-C-EEEECCCHHHHHHHHH
Confidence 5556677899999998 3477777766653 3499999999987777733221 1 1 1111111110 0
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
...+.+|+++.+..- ..+..+.++|+++|.+++...
T Consensus 214 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 214 ECPKGIDVFFDNVGG-------EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred hcCCCceEEEECCCc-------chHHHHHHHHhhCCEEEEEee
Confidence 112469999854331 358889999999999987644
No 351
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.57 E-value=0.046 Score=43.11 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=62.3
Q ss_pred HhhcCCCCCCeEEEecCCC--chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-----
Q 026688 54 KGYLKPVLGGNIIDASCGS--GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----- 126 (235)
Q Consensus 54 ~~~~~~~~~~~vLdiG~G~--G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----- 126 (235)
.+.....++.+||-.|+|. |..+..+++.. .++|+++|.++.-++.+++.- ... ++...-.+.
T Consensus 137 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lg--------a~~-~~~~~~~~~~~~~~ 206 (340)
T 3gms_A 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLG--------AAY-VIDTSTAPLYETVM 206 (340)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHT--------CSE-EEETTTSCHHHHHH
T ss_pred HHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCC--------CcE-EEeCCcccHHHHHH
Confidence 3445667789999999874 66666666643 349999999988888877631 111 111111111
Q ss_pred C-CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 127 P-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 127 ~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
. .....+|+++.+..-. ......++|+++|.++....
T Consensus 207 ~~~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 207 ELTNGIGADAAIDSIGGP-------DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HHTTTSCEEEEEESSCHH-------HHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCCcEEEECCCCh-------hHHHHHHHhcCCCEEEEEee
Confidence 0 1234799998543322 23345589999999988654
No 352
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.54 E-value=0.091 Score=41.48 Aligned_cols=99 Identities=13% Similarity=0.126 Sum_probs=64.8
Q ss_pred CCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc--ccc-C-C-CCCC
Q 026688 58 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD--ISR-L-P-FASS 131 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d--~~~-~-~-~~~~ 131 (235)
...++.+||-+|+|. |..+..+++.....+|+++|.+++-++.+++. + . . .++..+ ..+ . . ....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l----G---a-~-~~i~~~~~~~~~v~~~t~g~ 238 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV----G---A-D-AAVKSGAGAADAIRELTGGQ 238 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT----T---C-S-EEEECSTTHHHHHHHHHGGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----C---C-C-EEEcCCCcHHHHHHHHhCCC
Confidence 455689999999976 77777777764245999999999988888652 1 1 1 122111 111 0 0 1123
Q ss_pred ceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 132 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.+|+|+-... . ...+..+.++|+++|.+++....
T Consensus 239 g~d~v~d~~G-----~-~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 239 GATAVFDFVG-----A-QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp CEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCeEEEECCC-----C-HHHHHHHHHHHhcCCEEEEECCC
Confidence 7999984322 1 24688999999999999886543
No 353
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.53 E-value=0.14 Score=41.06 Aligned_cols=77 Identities=9% Similarity=0.034 Sum_probs=48.1
Q ss_pred CCCeEEEecCCCchHHHHHHHcC-------CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCce
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSG-------LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 133 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 133 (235)
.+-.|+|+|+|.|.++..+++.. ...+++.+|+|+...+.=++.+... .++.+. .++.++| .. .
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-----~~v~W~-~~l~~lp--~~-~ 150 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-----RNIHWH-DSFEDVP--EG-P 150 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-----SSEEEE-SSGGGSC--CS-S
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-----CCeEEe-CChhhcC--CC-C
Confidence 34679999999999988876541 2348999999998777555554331 134432 2233333 12 3
Q ss_pred eEEEecccccccC
Q 026688 134 DAVHAGAAIHCWS 146 (235)
Q Consensus 134 D~i~~~~~l~~~~ 146 (235)
-+|+++.++..++
T Consensus 151 ~~viANE~fDAlP 163 (387)
T 1zkd_A 151 AVILANEYFDVLP 163 (387)
T ss_dssp EEEEEESSGGGSC
T ss_pred eEEEeccccccCc
Confidence 4666666665544
No 354
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.52 E-value=0.026 Score=43.77 Aligned_cols=57 Identities=23% Similarity=0.218 Sum_probs=40.3
Q ss_pred CCeeEEeccccc-C-CCCCCceeEEEecccccccC--------------------ChHHHHHHHHHhccCCcEEEEEEe
Q 026688 114 ENFLLVRADISR-L-PFASSSIDAVHAGAAIHCWS--------------------SPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 114 ~~~~~~~~d~~~-~-~~~~~~~D~i~~~~~l~~~~--------------------~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.++.++++|..+ + .++.++||+|+++--..... ....+++++.++|+|||.+++...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 357899999976 2 24568999999974442111 013467899999999999988764
No 355
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.46 E-value=0.12 Score=40.84 Aligned_cols=98 Identities=12% Similarity=0.008 Sum_probs=63.1
Q ss_pred hhcCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc---C---
Q 026688 55 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---L--- 126 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~--- 126 (235)
+.....++.+||..|+ |.|..+..+++.. .++|++++.+++.++.+++.+ + . .. .+ |..+ .
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~---g---~-~~-~~--d~~~~~~~~~~ 217 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF---G---F-DD-AF--NYKEESDLTAA 217 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS---C---C-SE-EE--ETTSCSCSHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc---C---C-ce-EE--ecCCHHHHHHH
Confidence 4455667899999997 3477776666653 348999999988877776422 1 1 11 11 2211 1
Q ss_pred --CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 127 --PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 127 --~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
....+.+|+++.+... ..+..+.++|+++|.+++...
T Consensus 218 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 218 LKRCFPNGIDIYFENVGG-------KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp HHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhCCCCcEEEECCCH-------HHHHHHHHHHhcCCEEEEEcc
Confidence 0112469999854331 357889999999999987643
No 356
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.41 E-value=0.2 Score=39.88 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=63.6
Q ss_pred hhcCCCCCCeEEEec-C-CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-----C
Q 026688 55 GYLKPVLGGNIIDAS-C-GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----P 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG-~-G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~ 127 (235)
......++.+||-.| + |.|..+..+++.. .++|++++.+++-++.+++. + . . .++..+-.+. .
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~----G---a-~-~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL----G---C-D-RPINYKTEPVGTVLKQ 226 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T---C-S-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc----C---C-c-EEEecCChhHHHHHHH
Confidence 334556789999999 3 4587777777754 35899999998888777652 1 1 1 1111111110 0
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+|+.... . ..++.+.++|+++|.++....
T Consensus 227 ~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 227 EYPEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp HCTTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred hcCCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 11246999985433 1 467889999999999887654
No 357
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.41 E-value=0.13 Score=41.16 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=63.9
Q ss_pred hhcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc-----ccc-C
Q 026688 55 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD-----ISR-L 126 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d-----~~~-~ 126 (235)
......++.+||-+|+|. |..+..+++.. .+ .|+++|.++.-++.+++. . . . .++... +.+ .
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~l-G------a-~-~vi~~~~~~~~~~~~v 253 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEF-G------A-T-ECINPQDFSKPIQEVL 253 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHH-T------C-S-EEECGGGCSSCHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHc-C------C-c-eEeccccccccHHHHH
Confidence 344566789999999875 77777777754 34 799999999888888653 1 1 1 111111 110 0
Q ss_pred -CCCCCceeEEEecccccccCChHHHHHHHHHhccCC-cEEEEEEe
Q 026688 127 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 170 (235)
Q Consensus 127 -~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pg-G~li~~~~ 170 (235)
....+.+|+|+....- ...+..+.++|+++ |.+++...
T Consensus 254 ~~~~~~g~D~vid~~g~------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 254 IEMTDGGVDYSFECIGN------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp HHHTTSCBSEEEECSCC------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHhCCCCCEEEECCCc------HHHHHHHHHhhccCCcEEEEEec
Confidence 0112368999843221 24578899999999 99987653
No 358
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.36 E-value=0.096 Score=41.36 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=62.9
Q ss_pred hhcCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc--ccc-C-C-
Q 026688 55 GYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD--ISR-L-P- 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d--~~~-~-~- 127 (235)
......++.+||-.|+ | .|..+..+++.. .++|++++.+++-++.+++. + . . .+...+ +.+ . .
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g---a-~-~v~~~~~~~~~~v~~~ 222 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV----G---A-D-IVLPLEEGWAKAVREA 222 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----T---C-S-EEEESSTTHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C---C-c-EEecCchhHHHHHHHH
Confidence 4445667899999997 3 477777777754 35999999999888877763 1 1 1 122222 111 0 0
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.....+|+|+....-. .+..+.++|+++|.+++..
T Consensus 223 ~~~~g~Dvvid~~g~~-------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 223 TGGAGVDMVVDPIGGP-------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred hCCCCceEEEECCchh-------HHHHHHHhhcCCCEEEEEE
Confidence 1224799999644321 3678889999999998764
No 359
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.30 E-value=0.62 Score=42.19 Aligned_cols=77 Identities=13% Similarity=0.156 Sum_probs=52.9
Q ss_pred CCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC--------------
Q 026688 61 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-------------- 126 (235)
Q Consensus 61 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-------------- 126 (235)
...+++|+-||.|.++.-+.+.+....+.++|+++..++..+.+. +...++..|+.++
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~--------p~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN--------PGSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC--------TTSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC--------CCCccccccHHHHhhhccchhhhhhhh
Confidence 356899999999999999988874236889999999888777663 2344555554221
Q ss_pred -CCC-CCceeEEEeccccccc
Q 026688 127 -PFA-SSSIDAVHAGAAIHCW 145 (235)
Q Consensus 127 -~~~-~~~~D~i~~~~~l~~~ 145 (235)
.++ .+.+|+|+...-...+
T Consensus 611 ~~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp CBCCCTTTCSEEEECCCCTTC
T ss_pred hhcccCCCeeEEEEcCCCcch
Confidence 111 3468999976544333
No 360
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.16 E-value=0.21 Score=39.57 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=60.5
Q ss_pred hcCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------
Q 026688 56 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 127 (235)
.....++.+||-.|+ |.|..+..+++.. .++|++++.+++-++.+++. + . . .+. |..+..
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g---a-~-~~~--d~~~~~~~~~~~ 232 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN----G---A-H-EVF--NHREVNYIDKIK 232 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T---C-S-EEE--ETTSTTHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc----C---C-C-EEE--eCCCchHHHHHH
Confidence 345567899999997 3466666666543 35899999999877766542 1 1 1 111 221111
Q ss_pred --CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 128 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 128 --~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.....+|+++.+..- ..+..+.++|+++|.++...
T Consensus 233 ~~~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 233 KYVGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred HHcCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 112469999865432 34678899999999998765
No 361
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.01 E-value=0.17 Score=39.97 Aligned_cols=98 Identities=11% Similarity=0.076 Sum_probs=62.8
Q ss_pred hcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-----C-
Q 026688 56 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----P- 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~- 127 (235)
.... ++.+||-+|+|. |..+..+++.. .+ +|+++|.+++-++.+++.- . . .++..+-.+. .
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~G-------a-~-~~~~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVG-------A-D-YVINPFEEDVVKEVMDI 231 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHT-------C-S-EEECTTTSCHHHHHHHH
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhC-------C-C-EEECCCCcCHHHHHHHH
Confidence 3445 788999999964 77777777764 34 8999999998888776431 1 1 1111111110 0
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+|+..... ...+..+.+.|+++|.++....
T Consensus 232 ~~g~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 232 TDGNGVDVFLEFSGA------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp TTTSCEEEEEECSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCCEEEECCCC------HHHHHHHHHHHhcCCEEEEEcc
Confidence 112469999854331 2457888999999999887654
No 362
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.00 E-value=0.14 Score=40.35 Aligned_cols=95 Identities=20% Similarity=0.170 Sum_probs=62.0
Q ss_pred CCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC------C
Q 026688 58 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA------S 130 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~ 130 (235)
...++.+||-+|+|. |..+..+++.. .++|+++|.++.-++.+++ + + . . .+ .|..+..+. .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-l---G---a-~-~~--~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE-L---G---A-D-LV--VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-T---T---C-S-EE--ECTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-C---C---C-C-EE--ecCCCccHHHHHHHHh
Confidence 556689999999864 77777776653 3599999999988887764 1 1 1 1 11 122211100 0
Q ss_pred CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 131 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.+|+|+..... ...++.+.++|+++|.++....
T Consensus 229 ~~~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTAVS------KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCCC------HHHHHHHHHHhhcCCEEEEecc
Confidence 468999854321 2457888999999999887543
No 363
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.99 E-value=0.095 Score=41.44 Aligned_cols=100 Identities=12% Similarity=0.141 Sum_probs=61.2
Q ss_pred cCCCCCCeEEEecCCC--chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc---C-CCCC
Q 026688 57 LKPVLGGNIIDASCGS--GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---L-PFAS 130 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~--G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~-~~~~ 130 (235)
....++.+||..|+|. |..+..+++....++|+++|.+++.++.+++. . . ...+...+... . ....
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g------~-~~~~~~~~~~~~~~~~~~~~ 237 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-G------A-DYVINASMQDPLAEIRRITE 237 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-T------C-SEEEETTTSCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-C------C-CEEecCCCccHHHHHHHHhc
Confidence 4556789999999984 55555555542124899999999888877542 1 1 11111111100 0 1111
Q ss_pred -CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 131 -SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 131 -~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.+|+++....- ...++.+.++|+|+|.++....
T Consensus 238 ~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 238 SKGVDAVIDLNNS------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp TSCEEEEEESCCC------HHHHTTGGGGEEEEEEEEECCS
T ss_pred CCCceEEEECCCC------HHHHHHHHHHHhcCCEEEEECC
Confidence 479999854332 2457788899999999887543
No 364
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.98 E-value=0.14 Score=39.97 Aligned_cols=96 Identities=9% Similarity=0.038 Sum_probs=61.0
Q ss_pred hcCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------
Q 026688 56 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 127 (235)
.....++.+||-.|+ |.|.....+++.. .++|+++|.+++.++.+++. + . .. .. |..+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~----g---~-~~-~~--~~~~~~~~~~~~ 202 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKA----G---A-WQ-VI--NYREEDLVERLK 202 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH----T---C-SE-EE--ETTTSCHHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----C---C-CE-EE--ECCCccHHHHHH
Confidence 345566899999994 3466666555542 24899999998888777652 1 1 11 11 221110
Q ss_pred --CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 --~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+++.+.. ...++.+.++|+++|.++....
T Consensus 203 ~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 203 EITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11246999986544 2447888999999999887654
No 365
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.97 E-value=0.19 Score=39.55 Aligned_cols=94 Identities=15% Similarity=0.089 Sum_probs=62.1
Q ss_pred CCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC--------
Q 026688 58 KPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-------- 127 (235)
Q Consensus 58 ~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-------- 127 (235)
...++.+||..|+ |.|..+..+++.. .++|+++|.+++.++.+++. + . . .++ |..+..
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g---a-~-~~~--d~~~~~~~~~~~~~ 230 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL----G---A-D-ETV--NYTHPDWPKEVRRL 230 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T---C-S-EEE--ETTSTTHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C---C-C-EEE--cCCcccHHHHHHHH
Confidence 4556899999998 4577777777653 34999999999888887642 1 1 1 111 221110
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+++.... . ..+..+.++|+++|.++....
T Consensus 231 ~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 231 TGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp TTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred hCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 11247999996544 2 246788899999999887543
No 366
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.96 E-value=0.037 Score=44.48 Aligned_cols=101 Identities=17% Similarity=0.135 Sum_probs=57.0
Q ss_pred CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 61 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 61 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
++.+|+-+|+|. |......++.. .++|+++|.++.-++.+++.+.. .+.....+..++...-...|+|+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~-------~~~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCG-------RIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT-------SSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCC-------eeEeccCCHHHHHHHHcCCCEEEEC
Confidence 478999999975 55444444433 34899999999887777654321 1211111111111001357999874
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
........+.-+.++..+.++|||.++-..
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 322211222223456778899999887654
No 367
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.74 E-value=0.43 Score=37.18 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=57.4
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
..+|.-||+|. | .++..+.+.+...+|+++|.+++.++.+.+. + -+.-...|..+. .....|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~----G-----~~~~~~~~~~~~--~~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----G-----IIDEGTTSIAKV--EDFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----T-----SCSEEESCTTGG--GGGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC----C-----CcchhcCCHHHH--hhccCCEEEEe
Confidence 46899999986 4 4566666666544899999999887776542 1 111122333320 12457999865
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li 166 (235)
-.... ...+++++...++|+..++
T Consensus 102 vp~~~---~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 102 SPVRT---FREIAKKLSYILSEDATVT 125 (314)
T ss_dssp SCGGG---HHHHHHHHHHHSCTTCEEE
T ss_pred CCHHH---HHHHHHHHhhccCCCcEEE
Confidence 43321 2467888888899876554
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.73 E-value=0.2 Score=39.63 Aligned_cols=99 Identities=10% Similarity=-0.007 Sum_probs=62.7
Q ss_pred hhcCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----
Q 026688 55 GYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 127 (235)
+.....++.+||-.|+ | .|..+..+++.. .++|+++|.++.-++.+++.- . .. ++..+-.+..
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lG-------a-~~-~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLG-------A-KR-GINYRSEDFAAVIKA 230 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHT-------C-SE-EEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcC-------C-CE-EEeCCchHHHHHHHH
Confidence 3445667899999953 3 477777777653 358999999998888877631 1 11 1111111100
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+++.+..- ..+..+.+.|+++|.++....
T Consensus 231 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 231 ETGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HHSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 113569999964432 246788899999999887653
No 369
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.72 E-value=0.058 Score=42.94 Aligned_cols=98 Identities=10% Similarity=0.104 Sum_probs=60.9
Q ss_pred cCCCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc-cC--CCCCCc
Q 026688 57 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS-RL--PFASSS 132 (235)
Q Consensus 57 ~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~-~~--~~~~~~ 132 (235)
....++.+||-+|+|. |..+..+++.. .++|+++|.++.-++.+++. . . . .++..+-. +. ... +.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l-G------a-~-~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM-G------A-D-HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-T------C-S-EEEEGGGTSCHHHHSC-SC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-C------C-C-EEEcCcCchHHHHHhh-cC
Confidence 4556789999999865 77777777653 34899999998888887652 1 1 1 11211111 10 111 47
Q ss_pred eeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 133 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 133 ~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
+|+|+...... ....+..+.++|+++|.++...
T Consensus 244 ~D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 99999644320 0122456788999999988754
No 370
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.69 E-value=0.39 Score=37.87 Aligned_cols=92 Identities=11% Similarity=0.151 Sum_probs=59.0
Q ss_pred CCCeEEEe-cCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec--cccc-C-CCCCCcee
Q 026688 61 LGGNIIDA-SCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA--DISR-L-PFASSSID 134 (235)
Q Consensus 61 ~~~~vLdi-G~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~--d~~~-~-~~~~~~~D 134 (235)
++.+||-. |+|. |..+..+++.. .++|++++.+++-++.+++.- . . .++.. |..+ . ......+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lG-------a-~-~vi~~~~~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMG-------A-D-IVLNHKESLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHT-------C-S-EEECTTSCHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcC-------C-c-EEEECCccHHHHHHHhCCCCcc
Confidence 68899999 4554 77777777753 359999999998888887631 1 1 11111 1110 0 11235699
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEE
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~ 168 (235)
+|+.... ....+..+.++|+++|.++..
T Consensus 220 vv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 220 YVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 9985322 235578899999999999754
No 371
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=94.69 E-value=0.19 Score=39.18 Aligned_cols=91 Identities=13% Similarity=0.123 Sum_probs=59.0
Q ss_pred eEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-CCCCCceeEEEecc
Q 026688 64 NIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAGA 140 (235)
Q Consensus 64 ~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D~i~~~~ 140 (235)
+||-.|+ | .|..+..+++.. .++|++++.+++-++.+++. + . ...+-..+.... ....+.+|+++-..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l----G---a-~~vi~~~~~~~~~~~~~~~~d~v~d~~ 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL----G---A-NRILSRDEFAESRPLEKQLWAGAIDTV 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH----T---C-SEEEEGGGSSCCCSSCCCCEEEEEESS
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C---C-CEEEecCCHHHHHhhcCCCccEEEECC
Confidence 4999997 4 478888887764 45999999999888888763 1 1 111111111111 12235789887432
Q ss_pred cccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 141 AIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 141 ~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
. ...+..+.++|+|+|.++....
T Consensus 220 -----g--~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 220 -----G--DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp -----C--HHHHHHHHHTEEEEEEEEECCC
T ss_pred -----C--cHHHHHHHHHHhcCCEEEEEec
Confidence 1 1368899999999999987643
No 372
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.66 E-value=0.14 Score=40.51 Aligned_cols=96 Identities=15% Similarity=0.139 Sum_probs=61.1
Q ss_pred cCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccc---cCC----
Q 026688 57 LKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS---RLP---- 127 (235)
Q Consensus 57 ~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~---~~~---- 127 (235)
....++.+||..|+ |.|..+..+++.. .++|+++|.+++.++.+++. + . . .+ .|.. +..
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~----g---~-~-~~--~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI----G---G-E-VF--IDFTKEKDIVGAVL 232 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT----T---C-C-EE--EETTTCSCHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc----C---C-c-eE--EecCccHhHHHHHH
Confidence 35566899999998 3566666666543 34999999988877766541 1 1 1 11 1322 110
Q ss_pred -CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
...+.+|+++.+... ...++.+.+.|+++|.++....
T Consensus 233 ~~~~~~~D~vi~~~g~------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 233 KATDGGAHGVINVSVS------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHHTSCEEEEEECSSC------HHHHHHHTTSEEEEEEEEECCC
T ss_pred HHhCCCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEEeC
Confidence 011268999864432 2467889999999999887544
No 373
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.63 E-value=0.29 Score=38.31 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=61.8
Q ss_pred hcCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------
Q 026688 56 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 127 (235)
.....++.+||-.|+ |.|..+..+++.. .++|+++|.+++.++.+++. + . .. .. |..+..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g---~-~~-~~--d~~~~~~~~~i~ 207 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL----G---C-HH-TI--NYSTQDFAEVVR 207 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----T---C-SE-EE--ETTTSCHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C---C-CE-EE--ECCCHHHHHHHH
Confidence 345567899999995 4577666666643 34999999999887777652 1 1 11 11 221111
Q ss_pred --CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 --~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+++.+..- ..++.+.++|+++|.++....
T Consensus 208 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 208 EITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 112469999865432 347788999999999887653
No 374
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.62 E-value=0.28 Score=38.87 Aligned_cols=96 Identities=8% Similarity=-0.010 Sum_probs=60.7
Q ss_pred hcCCCCCCeEEEecC--CCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------
Q 026688 56 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 127 (235)
.....++.+||-.|+ |.|..+..+++.. .++|+++|.+++-++.+++. . . .. .. |..+..
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-g------~-~~-~~--~~~~~~~~~~~~ 224 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL-G------A-AA-GF--NYKKEDFSEATL 224 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-T------C-SE-EE--ETTTSCHHHHHH
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-C------C-cE-EE--ecCChHHHHHHH
Confidence 345566889999984 3466666666543 35899999999888877542 1 1 11 11 221110
Q ss_pred --CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 --~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+++.+..- ..+..+.++|+++|.++....
T Consensus 225 ~~~~~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 225 KFTKGAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HHTTTSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred HHhcCCCceEEEECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 112469999865432 136778899999999987654
No 375
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.55 E-value=0.045 Score=43.57 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=59.7
Q ss_pred cCCC-CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCcee
Q 026688 57 LKPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 134 (235)
Q Consensus 57 ~~~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 134 (235)
.... ++.+||-+|+|. |..+..+++.. .++|+++|.+++-++.+++.+. ...+ +...+........+.+|
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lG------a~~v-i~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLG------ADDY-VIGSDQAKMSELADSLD 246 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSC------CSCE-EETTCHHHHHHSTTTEE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcC------Ccee-eccccHHHHHHhcCCCC
Confidence 3445 688999999875 66666676653 3489999999877776653221 1111 11111111100124699
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+|+-...-. ..+..+.++|+|+|.++....
T Consensus 247 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 247 YVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred EEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 998543321 125667889999999987543
No 376
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.54 E-value=0.081 Score=42.22 Aligned_cols=99 Identities=15% Similarity=0.128 Sum_probs=59.6
Q ss_pred cCCC-CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec-ccccCCCCCCce
Q 026688 57 LKPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSI 133 (235)
Q Consensus 57 ~~~~-~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 133 (235)
.... ++.+||-+|+|. |..+..+++.. .++|++++.+++-++.+++.+. . . .++.. +........+.+
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lG------a-~-~v~~~~~~~~~~~~~~~~ 252 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFG------A-D-SFLVSRDQEQMQAAAGTL 252 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSC------C-S-EEEETTCHHHHHHTTTCE
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcC------C-c-eEEeccCHHHHHHhhCCC
Confidence 3444 688999999865 66666666653 3589999999887777654321 1 1 11111 111111011469
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
|+|+...... ..++.+.++|+++|.++....
T Consensus 253 D~vid~~g~~------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 253 DGIIDTVSAV------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EEEEECCSSC------CCSHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCcH------HHHHHHHHHHhcCCEEEEEcc
Confidence 9998543321 124567788999999887543
No 377
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.52 E-value=0.18 Score=39.97 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=57.6
Q ss_pred CeEEEecCCC-chHH-HHHH-HcCCCce-EEEEeCCHH---HHHHHHHHhhhcCCCCCCCeeEEecccccCCCC-----C
Q 026688 63 GNIIDASCGS-GLFS-RIFA-KSGLFSL-VVALDYSEN---MLKQCYEFVQQESNFPKENFLLVRADISRLPFA-----S 130 (235)
Q Consensus 63 ~~vLdiG~G~-G~~~-~~l~-~~~~~~~-v~~~D~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~ 130 (235)
.+||-+|+|. |.++ ..++ +.. .++ |+++|.+++ -++.+++. + .... |..+..+. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l----G------a~~v--~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL----D------ATYV--DSRQTPVEDVPDVY 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT----T------CEEE--ETTTSCGGGHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc----C------Cccc--CCCccCHHHHHHhC
Confidence 8999999865 7777 7777 543 345 999999887 77777642 1 1112 22211110 1
Q ss_pred CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 131 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+.+|+|+-... . ...+..+.++|+++|.++....
T Consensus 241 gg~Dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 241 EQMDFIYEATG-----F-PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC-----C-hHHHHHHHHHHhcCCEEEEEeC
Confidence 36899984322 1 2457889999999999887654
No 378
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=94.49 E-value=0.27 Score=40.42 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=61.8
Q ss_pred cCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec---cc--------
Q 026688 57 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA---DI-------- 123 (235)
Q Consensus 57 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~---d~-------- 123 (235)
....++.+||-+|+ | .|..+..+++.. .+++++++.++.-++.+++.=. . .++.. |.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa--------~-~vi~~~~~d~~~~~~~~~ 293 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGA--------E-AIIDRNAEGYRFWKDENT 293 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC--------C-EEEETTTTTCCSEEETTE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC--------c-EEEecCcCcccccccccc
Confidence 35567899999997 4 377777777764 4589999999988888865311 1 11111 10
Q ss_pred ----------ccC-C-CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 124 ----------SRL-P-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 124 ----------~~~-~-~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
..+ . .....+|+|+-... ...+..+.++|+++|.+++..
T Consensus 294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 294 QDPKEWKRFGKRIRELTGGEDIDIVFEHPG-------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp ECHHHHHHHHHHHHHHHTSCCEEEEEECSC-------HHHHHHHHHHEEEEEEEEESC
T ss_pred cchHHHHHHHHHHHHHhCCCCCcEEEEcCC-------chhHHHHHHHhhCCcEEEEEe
Confidence 000 0 11257999984322 145788899999999998754
No 379
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.47 E-value=0.093 Score=40.58 Aligned_cols=94 Identities=17% Similarity=0.048 Sum_probs=58.7
Q ss_pred CCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc-ccCCCCCCceeE
Q 026688 59 PVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SRLPFASSSIDA 135 (235)
Q Consensus 59 ~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~D~ 135 (235)
..++.+||-.|+ | .|..+..+++.. .++|+++|.+++-++.+++. + . . .+...+- .+..-.-+.+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g---a-~-~~~~~~~~~~~~~~~~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL----G---A-E-EAATYAEVPERAKAWGGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT----T---C-S-EEEEGGGHHHHHHHTTSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----C---C-C-EEEECCcchhHHHHhcCceE
Confidence 556899999998 3 477777777654 35999999998877777541 1 1 1 1111111 111000156999
Q ss_pred EEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 136 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 136 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
|+. ..- ..++.+.++++++|.++....
T Consensus 193 vid-~g~-------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 193 VLE-VRG-------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EEE-CSC-------TTHHHHHTTEEEEEEEEEC--
T ss_pred EEE-CCH-------HHHHHHHHhhccCCEEEEEeC
Confidence 986 322 247788999999999887543
No 380
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.41 E-value=0.084 Score=41.68 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=62.3
Q ss_pred CCCCCCeEEEecCCC-chHHHHHHHcC-CCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe----ccc-ccCCCCC
Q 026688 58 KPVLGGNIIDASCGS-GLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR----ADI-SRLPFAS 130 (235)
Q Consensus 58 ~~~~~~~vLdiG~G~-G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~----~d~-~~~~~~~ 130 (235)
.. ++.+||-+|+|. |..+..+++.. +.++|+++|.+++-++.+++. . . . .++. .|. .+.. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-G------a-~-~vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-G------A-D-YVSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-T------C-S-EEECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-C------C-C-EEeccccchHHHHHhh-cC
Confidence 44 689999999975 67777776653 235899999999888888653 1 1 1 1111 111 1111 12
Q ss_pred CceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 131 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 131 ~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
..+|+|+..... ...++.+.++|+|+|.++....
T Consensus 237 ~g~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 237 LGASIAIDLVGT------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CCEEEEEESSCC------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCccEEEECCCC------hHHHHHHHHHhhcCCEEEEeCC
Confidence 379999954321 2467889999999999887654
No 381
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.30 E-value=0.062 Score=43.02 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=54.2
Q ss_pred CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 61 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 61 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
++.+|+-+|+|. |......++.. .++|+++|.++..++.+.+... ..+.....+..++.-.-..+|+|+..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~~~~~~~~~~~g-------~~~~~~~~~~~~l~~~~~~~DvVi~~ 236 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM-GAQVTILDVNHKRLQYLDDVFG-------GRVITLTATEANIKKSVQHADLLIGA 236 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTT-------TSEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHhcC-------ceEEEecCCHHHHHHHHhCCCEEEEC
Confidence 368999999964 44444443332 3499999999987776654331 12222111111111001357999865
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
........+.-+.+.+.+.++|||.++...
T Consensus 237 ~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 237 VLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 443311111123466778889999877543
No 382
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=94.15 E-value=0.087 Score=42.89 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=35.8
Q ss_pred CCeEEEecCCCchHHHHHHHcC----C-CceEEEEeCCHHHHHHHHHHhhh
Q 026688 62 GGNIIDASCGSGLFSRIFAKSG----L-FSLVVALDYSENMLKQCYEFVQQ 107 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~----~-~~~v~~~D~s~~~~~~a~~~~~~ 107 (235)
+.+|+|+|+|.|.+...+++.. + ..+++.||+|+.+.+.=++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 4799999999999988776532 1 24799999999887776666653
No 383
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.13 E-value=0.29 Score=38.12 Aligned_cols=96 Identities=16% Similarity=0.091 Sum_probs=58.3
Q ss_pred hhcCCCCCCeEEEec-CCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccccc-CCCCCC
Q 026688 55 GYLKPVLGGNIIDAS-CGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASS 131 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG-~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~ 131 (235)
......++.+||-.| +|. |..+..+++.. .++|++++ ++.-++.+++. + . . .++..+-.+ ......
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l----G---a-~-~~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL----G---A-E-QCINYHEEDFLLAIST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH----T---C-S-EEEETTTSCHHHHCCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc----C---C-C-EEEeCCCcchhhhhcc
Confidence 445667789999996 554 88888887764 45888887 45446665542 1 1 1 122111111 111124
Q ss_pred ceeEEEecccccccCChHHHHHHHHHhccCCcEEEEE
Q 026688 132 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~ 168 (235)
.+|+|+-... . ..+..+.++|+++|.++..
T Consensus 215 g~D~v~d~~g------~-~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 215 PVDAVIDLVG------G-DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp CEEEEEESSC------H-HHHHHHGGGEEEEEEEEEC
T ss_pred CCCEEEECCC------c-HHHHHHHHhccCCCEEEEe
Confidence 6899884322 1 2247889999999999875
No 384
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.11 E-value=0.074 Score=42.45 Aligned_cols=101 Identities=16% Similarity=0.140 Sum_probs=57.7
Q ss_pred CCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 62 GGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 62 ~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
+.+|+-+|+|. |......++.. .++|+++|.+++-++.+++.... .+.....+..++.-.-..+|+|+...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~DvVI~~~ 238 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINVERLSYLETLFGS-------RVELLYSNSAEIETAVAEADLLIGAV 238 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHGG-------GSEEEECCHHHHHHHHHTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhhCc-------eeEeeeCCHHHHHHHHcCCCEEEECC
Confidence 58999999975 55444444432 23899999999888877665432 12222111111110013589998655
Q ss_pred cccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 141 AIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 141 ~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.......+.-+.+...+.++|||.++....
T Consensus 239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 239 LVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 443211221123456778899998876543
No 385
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.00 E-value=0.5 Score=37.20 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=60.9
Q ss_pred hhcCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----
Q 026688 55 GYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 127 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----- 127 (235)
+.....++.+||-+|+ | .|..+..+++.. .++|+++ .++.-++.+++. + ...+. +-.+..
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l----G------a~~i~-~~~~~~~~~~~ 210 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL----G------ATPID-ASREPEDYAAE 210 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH----T------SEEEE-TTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc----C------CCEec-cCCCHHHHHHH
Confidence 4455667899999994 4 477777777653 3589999 788877777653 1 11111 111110
Q ss_pred -CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 128 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.....+|+|+-... . ..+..+.++|+++|.++...
T Consensus 211 ~~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 211 HTAGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HHTTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred HhcCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 12347999985332 1 45788899999999988754
No 386
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.99 E-value=0.41 Score=38.20 Aligned_cols=95 Identities=13% Similarity=0.074 Sum_probs=56.2
Q ss_pred CCCCCeEEEec-CC-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC--C-CCCCce
Q 026688 59 PVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--P-FASSSI 133 (235)
Q Consensus 59 ~~~~~~vLdiG-~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--~-~~~~~~ 133 (235)
..++.+||-.| +| .|..+..+++.. .++|++++ ++.-++.+++ .+ . . .++..+-.+. . .....+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~----lG---a-~-~v~~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRK----LG---A-D-DVIDYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH----TT---C-S-EEEETTSSCHHHHHHTSCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHH----cC---C-C-EEEECCchHHHHHHhhcCCC
Confidence 55688999999 44 477777777754 35899988 6666666543 11 1 1 1111111110 0 012468
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
|+|+.... .....+....++++++|.++...
T Consensus 250 D~vid~~g-----~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDNVG-----GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEESSC-----TTHHHHGGGGBCSSSCCEEEESC
T ss_pred CEEEECCC-----ChhhhhHHHHHhhcCCcEEEEeC
Confidence 99884332 22234567788999999988754
No 387
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=93.93 E-value=0.59 Score=35.83 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=53.5
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-C--------C-
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P--------F- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~--------~- 128 (235)
+++||-.|++.| .++..|++++. +|++++.++..++.+.+.+...+ ..++.++..|+.+. . .
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN---HENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT---CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC---CCceEEEEccCCCcHHHHHHHHHHHH
Confidence 567888887665 33445566665 99999999988777777665543 34788999999764 2 0
Q ss_pred -CCCceeEEEeccccc
Q 026688 129 -ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 -~~~~~D~i~~~~~l~ 143 (235)
..+..|+++.+..+.
T Consensus 87 ~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 87 THFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhCCCCCEEEECCccc
Confidence 014789999876653
No 388
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=93.78 E-value=0.67 Score=34.73 Aligned_cols=100 Identities=23% Similarity=0.274 Sum_probs=64.6
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-C---------
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-F--------- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-~--------- 128 (235)
++++|-.|++.| ..+..+++.+. +|+.+|.+++.++...+.+ ..++.++..|+.+.. .
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHHH
Confidence 678888887665 33445666665 8999999988777766554 236788889987632 0
Q ss_pred CCCceeEEEecccccccC-----ChH--------------HHHHHHHHhccCCcEEEEEEe
Q 026688 129 ASSSIDAVHAGAAIHCWS-----SPS--------------TGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~-----~~~--------------~~l~~~~~~L~pgG~li~~~~ 170 (235)
.-+..|+++.+....... +.+ ...+.+.+.++++|.++....
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 014789999876543321 111 235566667777888776554
No 389
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.77 E-value=0.83 Score=34.31 Aligned_cols=105 Identities=18% Similarity=0.263 Sum_probs=66.7
Q ss_pred CCeEEEecCC--Cc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC--
Q 026688 62 GGNIIDASCG--SG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 129 (235)
Q Consensus 62 ~~~vLdiG~G--~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 129 (235)
++++|-.|++ .| .++..+++.+. +|+.++.++...+.+.+.....+ ..++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLD---RNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSS---SCCCEEEECCCSSSHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcC---CCCceEEeCCCCCHHHHHHHHHHH
Confidence 5788888876 33 34556666665 89999988766666655544432 236888999997642 00
Q ss_pred ---CCceeEEEecccccc----c-----CChH--------------HHHHHHHHhccCCcEEEEEEec
Q 026688 130 ---SSSIDAVHAGAAIHC----W-----SSPS--------------TGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 130 ---~~~~D~i~~~~~l~~----~-----~~~~--------------~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.+..|+++.+..+.. . .+.+ .+++.+...++++|.++.....
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 146899997755432 1 1111 2456677778888888876643
No 390
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.76 E-value=0.59 Score=36.97 Aligned_cols=98 Identities=5% Similarity=-0.074 Sum_probs=62.5
Q ss_pred hhcCCCCC--CeEEEecC--CCchHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC--
Q 026688 55 GYLKPVLG--GNIIDASC--GSGLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 127 (235)
Q Consensus 55 ~~~~~~~~--~~vLdiG~--G~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-- 127 (235)
......++ .+||-.|+ |.|..+..+++.. .+ +|+++|.+++-++.+++.+. . .. . .|..+..
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g------~-~~-~--~d~~~~~~~ 220 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELG------F-DA-A--INYKKDNVA 220 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC------C-SE-E--EETTTSCHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcC------C-ce-E--EecCchHHH
Confidence 44556667 89999998 3466666666654 45 89999999877776654221 1 11 1 1221111
Q ss_pred -----CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 -----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 -----~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
...+.+|+++.+.. ...+..+.++|+++|++++...
T Consensus 221 ~~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 221 EQLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 11126899986544 1467889999999999987643
No 391
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.70 E-value=0.99 Score=35.11 Aligned_cols=78 Identities=13% Similarity=0.202 Sum_probs=53.7
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
+++||-.|++.| .++..|++.+. +|++++.++..++.+.+.+...+. ..++.++..|+.+.. +
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEGS--GPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCC--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 568888888765 34445666665 899999999888877776654421 236888999987632 0
Q ss_pred CCCceeEEEeccccc
Q 026688 129 ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~ 143 (235)
..+..|+++.+..+.
T Consensus 84 ~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 84 RFGPVSILCNNAGVN 98 (319)
T ss_dssp HTCCEEEEEECCCCC
T ss_pred hCCCCCEEEECCCcC
Confidence 014689999876653
No 392
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.57 E-value=0.33 Score=38.62 Aligned_cols=88 Identities=11% Similarity=0.053 Sum_probs=56.2
Q ss_pred CCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCH---HHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC------CC
Q 026688 62 GGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSE---NMLKQCYEFVQQESNFPKENFLLVRADISRLPFA------SS 131 (235)
Q Consensus 62 ~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~---~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~ 131 (235)
+.+||-+|+|. |..+..+++.. .++|+++|.++ +-++.+++. + .... | .+ .+. ..
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~----g------a~~v--~-~~-~~~~~~~~~~~ 245 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET----K------TNYY--N-SS-NGYDKLKDSVG 245 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH----T------CEEE--E-CT-TCSHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh----C------Ccee--c-hH-HHHHHHHHhCC
Confidence 78999999853 55555555542 24999999987 766666542 1 1122 2 21 110 14
Q ss_pred ceeEEEecccccccCChHHHH-HHHHHhccCCcEEEEEEe
Q 026688 132 SIDAVHAGAAIHCWSSPSTGV-AEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l-~~~~~~L~pgG~li~~~~ 170 (235)
.+|+|+...... ..+ +.+.+.|+++|.++....
T Consensus 246 ~~d~vid~~g~~------~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 246 KFDVIIDATGAD------VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CEEEEEECCCCC------THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCEEEECCCCh------HHHHHHHHHHHhcCCEEEEEec
Confidence 699998544321 245 888999999999887644
No 393
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.29 E-value=0.28 Score=38.65 Aligned_cols=95 Identities=14% Similarity=0.135 Sum_probs=61.2
Q ss_pred hcCCCCCCeEEEecCCC-chHHHHHHHcCCCc-eEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------
Q 026688 56 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 127 (235)
Q Consensus 56 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------ 127 (235)
.... ++.+||-+|+|. |..+..+++.. .+ +|+++|.+++-++.+++. .. .++ |..+..
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~---------~v~--~~~~~~~~~~~~ 225 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-AD---------RLV--NPLEEDLLEVVR 225 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CS---------EEE--CTTTSCHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HH---------hcc--CcCccCHHHHHH
Confidence 4455 789999999864 67777777764 35 899999998776666542 11 111 211100
Q ss_pred -CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 128 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.....+|+|+.... . ...++.+.++|+++|.++....
T Consensus 226 ~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 226 RVTGSGVEVLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HHHSSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred HhcCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 01246999985332 1 2457889999999999887643
No 394
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.23 E-value=1 Score=36.00 Aligned_cols=113 Identities=11% Similarity=0.028 Sum_probs=67.9
Q ss_pred HHHHhhcCC-CCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCC
Q 026688 51 ELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 129 (235)
Q Consensus 51 ~~i~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (235)
+.+++.+.. ..+.+||.++.+.|.++..++... ++.+.=|--.....+.++..++.. ...+++. +..+. .
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~~-~~~~~~~--~~~~~--~ 97 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGID-ESSVKFL--DSTAD--Y 97 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTCC-GGGSEEE--ETTSC--C
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCCC-ccceEec--ccccc--c
Confidence 455555433 245789999999999999887653 344432444445566666665531 1234442 22221 2
Q ss_pred CCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 130 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 130 ~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
...||+|+.... -+.......|..+...|+||+.+++...+..
T Consensus 98 ~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~ 140 (375)
T 4dcm_A 98 PQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKARD 140 (375)
T ss_dssp CSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGGG
T ss_pred ccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEecccc
Confidence 367999885221 1111224668889999999999988776653
No 395
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=93.10 E-value=3.5 Score=36.41 Aligned_cols=44 Identities=14% Similarity=0.091 Sum_probs=35.0
Q ss_pred CCeEEEecCCCchHHHHHHHcCC-----CceEEEEeCCHHHHHHHHHHh
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGL-----FSLVVALDYSENMLKQCYEFV 105 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~-----~~~v~~~D~s~~~~~~a~~~~ 105 (235)
..+|||+-||.|.++.-+.+.+. .-.+.++|+++.+++.-+.+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 47899999999999988876541 125789999999888877763
No 396
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.07 E-value=1.2 Score=36.42 Aligned_cols=98 Identities=18% Similarity=0.117 Sum_probs=61.1
Q ss_pred cCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCC-eeEEecccc---------
Q 026688 57 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKEN-FLLVRADIS--------- 124 (235)
Q Consensus 57 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~-~~~~~~d~~--------- 124 (235)
....++.+||-.|+ | .|..+..+++.. .+++++++.+++-++.+++. + ... +.....|..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l----G---a~~~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL----G---CDLVINRAELGITDDIADDPRR 287 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----T---CCCEEEHHHHTCCTTGGGCHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----C---CCEEEecccccccccccccccc
Confidence 45567899999997 4 377777777653 45899999999888877542 1 111 111111110
Q ss_pred ----------cC-CCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 125 ----------RL-PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 125 ----------~~-~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.. ......+|+|+-...- ..+....++++++|.++...
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESC
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEe
Confidence 00 0012468999854332 35778889999999998864
No 397
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.06 E-value=1.3 Score=29.67 Aligned_cols=91 Identities=10% Similarity=0.063 Sum_probs=57.0
Q ss_pred CCeEEEecCCC-chH-HHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----CCCCceeE
Q 026688 62 GGNIIDASCGS-GLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 135 (235)
Q Consensus 62 ~~~vLdiG~G~-G~~-~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 135 (235)
..+|+-+|+|. |.. +..|.+.+. .|+++|.+++.++.+++. .+.++.+|..+.. .....+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~~----------g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRER----------GVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHT----------TCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHc----------CCCEEECCCCCHHHHHhcCcccCCE
Confidence 46899999976 533 334444454 899999999888777641 4567788876531 12346888
Q ss_pred EEecccccccCChH--HHHHHHHHhccCCcEEEEEE
Q 026688 136 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 136 i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~ 169 (235)
+++. .++.. ..+-...+.+.|+..++...
T Consensus 75 vi~~-----~~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 75 LILT-----IPNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EEEC-----CSCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEEE-----CCChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 8853 23322 22334556677887766544
No 398
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=93.03 E-value=1.7 Score=35.20 Aligned_cols=45 Identities=7% Similarity=0.012 Sum_probs=36.3
Q ss_pred CCeEEEecCCCchHHHHHHHcCCC-ce----EEEEeCCHHHHHHHHHHhh
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLF-SL----VVALDYSENMLKQCYEFVQ 106 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~-~~----v~~~D~s~~~~~~a~~~~~ 106 (235)
..+|+|+-||.|.....+.+.+.. .. |.++|+++..+..-+.+..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 468999999999999999887621 13 7889999999888777664
No 399
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=92.95 E-value=1.3 Score=33.95 Aligned_cols=104 Identities=12% Similarity=0.172 Sum_probs=65.4
Q ss_pred CCCeEEEecCCCc-----hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C--
Q 026688 61 LGGNIIDASCGSG-----LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 128 (235)
Q Consensus 61 ~~~~vLdiG~G~G-----~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-- 128 (235)
.++++|-.|++.| .++..+++.+. +|+.++.++...+.+++..... .++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHH
Confidence 3678888887632 34556666665 8999999876555555544432 25778889987632 0
Q ss_pred ---CCCceeEEEecccccc-------c--CCh--------------HHHHHHHHHhccCCcEEEEEEec
Q 026688 129 ---ASSSIDAVHAGAAIHC-------W--SSP--------------STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 129 ---~~~~~D~i~~~~~l~~-------~--~~~--------------~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.-+..|+++.+..+.. + .+. ..+++.+.+.++++|.++.....
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 0147899998765432 0 011 13456677777788888876543
No 400
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.94 E-value=1.1 Score=34.20 Aligned_cols=100 Identities=17% Similarity=0.126 Sum_probs=65.7
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----------C
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----------F 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 128 (235)
++.+|--|++.| ..+..|++.+. +|..+|.+++.++.+.+.+ ..+...+.+|+.+.. -
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKVKA 99 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 677787787776 34556666665 9999999998887766554 235677888987632 0
Q ss_pred CCCceeEEEecccccccCC-----h--------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 129 ASSSIDAVHAGAAIHCWSS-----P--------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~-----~--------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.-+..|+++.+........ . -...+.+.+.++.+|.++....
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 1257899998765433211 1 1345677778888887766543
No 401
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.83 E-value=2.4 Score=32.08 Aligned_cols=103 Identities=17% Similarity=0.147 Sum_probs=65.5
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCC------------HHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
++++|-.|++.| .++..|++.+. +|+.+|.+ ...++.+...+... ..++.++..|+.+.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT----GRKAYTAEVDVRDR 83 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT----TSCEEEEECCTTCH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc----CCceEEEEccCCCH
Confidence 578888887665 34445666665 89999987 66666665555443 34788899999763
Q ss_pred C-----CC-----CCceeEEEecccccccC---Ch--------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 127 P-----FA-----SSSIDAVHAGAAIHCWS---SP--------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 127 ~-----~~-----~~~~D~i~~~~~l~~~~---~~--------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
. +. -+..|+++.+....... +. -.+++.+.+.++++|.++....
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 2 00 13789999876543221 11 1345667777778888776543
No 402
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.82 E-value=0.082 Score=42.35 Aligned_cols=97 Identities=19% Similarity=0.120 Sum_probs=56.1
Q ss_pred CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecc-----------------
Q 026688 61 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD----------------- 122 (235)
Q Consensus 61 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d----------------- 122 (235)
++.+|+-+|+|. |.....+++.. .++|+++|.++.-++.+++. . .++...+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~l-G---------a~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPEVAEQVRSV-G---------AQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGGGHHHHHHT-T---------CEECCCC-------------CHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-C---------CeEEeccccccccccchhhhhHHH
Confidence 578999999986 55555444432 34899999999887777652 1 1121111
Q ss_pred ----cccCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEE
Q 026688 123 ----ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168 (235)
Q Consensus 123 ----~~~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~ 168 (235)
...+.-.-...|+|+..-....-..+.-+-+++.+.+|||+.++-.
T Consensus 252 ~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 252 RAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 0011101257899996432221112222346788889998876643
No 403
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=92.72 E-value=0.34 Score=37.84 Aligned_cols=97 Identities=11% Similarity=0.082 Sum_probs=58.9
Q ss_pred CCCCCC-eEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc-cc-C-CCCCC
Q 026688 58 KPVLGG-NIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SR-L-PFASS 131 (235)
Q Consensus 58 ~~~~~~-~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~-~-~~~~~ 131 (235)
...++. +||-.|+ | .|..+..+++.. .+++++++.+++-++.+++. . . ...+-..+. .+ . .....
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l-G------a-~~v~~~~~~~~~~~~~~~~~ 216 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL-G------A-SEVISREDVYDGTLKALSKQ 216 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH-T------C-SEEEEHHHHCSSCCCSSCCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-C------C-cEEEECCCchHHHHHHhhcC
Confidence 344454 8999997 4 477777766653 24899999988777777652 1 1 111111111 11 1 11234
Q ss_pred ceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 132 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+|+|+.... . ..+..+.++++++|++++...
T Consensus 217 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 217 QWQGAVDPVG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CEEEEEESCC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred CccEEEECCc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 6899884332 2 357888999999999987543
No 404
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=92.40 E-value=2.4 Score=31.94 Aligned_cols=105 Identities=19% Similarity=0.221 Sum_probs=65.6
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeC-CHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
++++|-.|++.| ..+..|++.+. +|+.++. ++..++...+.+... ..++.++..|+.+.. +.
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKAL----GSDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 577888887665 33445666665 8888776 455566555555443 346888899987632 00
Q ss_pred --CCceeEEEecccccccCC-----h--------------HHHHHHHHHhccCCcEEEEEEecc
Q 026688 130 --SSSIDAVHAGAAIHCWSS-----P--------------STGVAEISRVLRPGGVFVGTTYIV 172 (235)
Q Consensus 130 --~~~~D~i~~~~~l~~~~~-----~--------------~~~l~~~~~~L~pgG~li~~~~~~ 172 (235)
-+..|+++.+........ . -.+++.+.+.++++|.++......
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 136899997755433211 1 134567778888888888766543
No 405
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=92.36 E-value=4.8 Score=37.77 Aligned_cols=44 Identities=16% Similarity=0.127 Sum_probs=36.6
Q ss_pred CCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHh
Q 026688 62 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFV 105 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~ 105 (235)
..+++|+-||.|.++.-+.+.+....+.++|+++..++..+.+.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC
Confidence 56899999999999999988874235889999999888777663
No 406
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=92.31 E-value=2.3 Score=31.82 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=67.6
Q ss_pred CCeEEEecCC----Cc-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC---------
Q 026688 62 GGNIIDASCG----SG-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------- 127 (235)
Q Consensus 62 ~~~vLdiG~G----~G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~--------- 127 (235)
++++|--|++ -| ..+..|++.+. +|..+|.++..++.+.+.+...+ ..++.++..|+.+..
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN---QPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT---CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC---CCcEEEEEccCCCHHHHHHHHHHH
Confidence 6788888853 33 34556777775 99999999988888887776643 346788889987632
Q ss_pred -CCCCceeEEEeccccccc-------C--ChH--------------HHHHHHHHhccCCcEEEEEEec
Q 026688 128 -FASSSIDAVHAGAAIHCW-------S--SPS--------------TGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 128 -~~~~~~D~i~~~~~l~~~-------~--~~~--------------~~l~~~~~~L~pgG~li~~~~~ 171 (235)
-.-+..|+++.+..+... . ..+ ...+.+...++.+|.|+.....
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~ 148 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL 148 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 012578999876543211 1 111 1223455667788988766543
No 407
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.26 E-value=0.13 Score=41.60 Aligned_cols=42 Identities=21% Similarity=0.117 Sum_probs=31.8
Q ss_pred CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q 026688 61 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 103 (235)
Q Consensus 61 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~ 103 (235)
++.+|+-+|+|. |.....+++.. .+.|+++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 468999999996 65555555543 4599999999988777765
No 408
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.12 E-value=2.2 Score=29.94 Aligned_cols=91 Identities=10% Similarity=0.071 Sum_probs=53.8
Q ss_pred CCeEEEecCCC-chH-HHHHHHc-CCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC----CC-CCCce
Q 026688 62 GGNIIDASCGS-GLF-SRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----PF-ASSSI 133 (235)
Q Consensus 62 ~~~vLdiG~G~-G~~-~~~l~~~-~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----~~-~~~~~ 133 (235)
+.+|+-+|+|. |.. +..+.+. +. .|+++|.+++.++.+++. .+.+..+|..+. .. ....+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~~----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRSE----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHHT----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHHC----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 56899999875 433 3344455 54 899999999877665531 244566666432 11 23568
Q ss_pred eEEEecccccccCChH--HHHHHHHHhccCCcEEEEEE
Q 026688 134 DAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~ 169 (235)
|+|+... ++.. ..+-...+.+.|++.++...
T Consensus 107 d~vi~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAM-----PHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECC-----SSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeC-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 9888632 2222 22233455566777777644
No 409
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.05 E-value=0.49 Score=36.93 Aligned_cols=97 Identities=13% Similarity=0.118 Sum_probs=58.3
Q ss_pred CCCCCC-eEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEeccc-cc-C-CCCCC
Q 026688 58 KPVLGG-NIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SR-L-PFASS 131 (235)
Q Consensus 58 ~~~~~~-~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~-~-~~~~~ 131 (235)
...++. +||-.|+ | .|..+..+++.. .++|++++.+++-++.+++ + + ... .+-..+. .+ . .....
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~-l---G---a~~-~i~~~~~~~~~~~~~~~~ 215 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV-L---G---AKE-VLAREDVMAERIRPLDKQ 215 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH-T---T---CSE-EEECC---------CCSC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-c---C---CcE-EEecCCcHHHHHHHhcCC
Confidence 344454 8999997 3 477777777654 3589999999877777764 2 1 111 1111111 01 0 11234
Q ss_pred ceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 132 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 132 ~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+|+|+-... . ..+..+.++++++|.+++...
T Consensus 216 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 216 RWAAAVDPVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CEEEEEECST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred cccEEEECCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 6899885432 1 247788899999999987543
No 410
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.03 E-value=1.7 Score=32.58 Aligned_cols=104 Identities=12% Similarity=0.101 Sum_probs=63.1
Q ss_pred CCCCeEEEecCC--Cc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-
Q 026688 60 VLGGNIIDASCG--SG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F- 128 (235)
Q Consensus 60 ~~~~~vLdiG~G--~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~- 128 (235)
..+++||-.|++ .| .++..|++.+. +|+.++.+....+.+++..... .++.++.+|+.+.. +
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHHH
Confidence 347889999875 33 23445566665 8999998865555554443332 24778889987632 0
Q ss_pred ----CCCceeEEEeccccccc----------CChH--------------HHHHHHHHhccCCcEEEEEEe
Q 026688 129 ----ASSSIDAVHAGAAIHCW----------SSPS--------------TGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ----~~~~~D~i~~~~~l~~~----------~~~~--------------~~l~~~~~~L~pgG~li~~~~ 170 (235)
.-+..|+++.+..+... .+.+ .+++.+.+.++++|.++....
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 01478999987654321 1111 235566666777787776554
No 411
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=92.03 E-value=2.7 Score=32.08 Aligned_cols=103 Identities=20% Similarity=0.236 Sum_probs=62.9
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHH-HHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSEN-MLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~-~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 128 (235)
++++|-.|++.| .++..|++.+. +|+.++.++. ..+...+.+... ..++.++.+|+.+.. +
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE----GVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 578888887665 33445566665 8999998764 344444444332 346888999997632 0
Q ss_pred -CCCceeEEEecccccccC------Ch--------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 129 -ASSSIDAVHAGAAIHCWS------SP--------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 -~~~~~D~i~~~~~l~~~~------~~--------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.-+..|+++.+....... +. -.+++.+.+.++++|.++....
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 014689999775432211 11 1345667777788888776543
No 412
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=92.01 E-value=1.5 Score=33.24 Aligned_cols=75 Identities=13% Similarity=0.112 Sum_probs=51.1
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCC---------C
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---------A 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~ 129 (235)
++++|-.|++.| .++..|++.+. +|+.+|.++..++...+.+... ..++.++..|+.+... .
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIAS----GGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHT----TCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 577887787655 33445566665 8999999887777766666543 3468889999976420 0
Q ss_pred CCceeEEEecccc
Q 026688 130 SSSIDAVHAGAAI 142 (235)
Q Consensus 130 ~~~~D~i~~~~~l 142 (235)
.+..|+++.+...
T Consensus 107 ~g~iD~lvnnAg~ 119 (275)
T 4imr_A 107 IAPVDILVINASA 119 (275)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCCEEEECCCC
Confidence 1468999987654
No 413
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.87 E-value=0.84 Score=30.55 Aligned_cols=67 Identities=21% Similarity=0.191 Sum_probs=43.7
Q ss_pred CCeEEEecCCC-ch-HHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----CCCCceeE
Q 026688 62 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 135 (235)
Q Consensus 62 ~~~vLdiG~G~-G~-~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 135 (235)
..+|+-+|+|. |. ++..+.+.+. +|+++|.+++.++.+++. ...++.+|..+.. .....+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~~----------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLEDE----------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHT----------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHC----------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 46899999975 33 3334444454 899999999887766541 3567778876531 12356898
Q ss_pred EEecc
Q 026688 136 VHAGA 140 (235)
Q Consensus 136 i~~~~ 140 (235)
|+...
T Consensus 74 vi~~~ 78 (141)
T 3llv_A 74 VLITG 78 (141)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 88543
No 414
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=91.62 E-value=3.1 Score=30.69 Aligned_cols=73 Identities=22% Similarity=0.321 Sum_probs=49.4
Q ss_pred CCCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-CCC
Q 026688 61 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-ASS 131 (235)
Q Consensus 61 ~~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-~~~ 131 (235)
++++||-.|++.| .++..+++.+. +|+.++.++..++...+.+ ..++.+...|+.+.. + ..+
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhcC
Confidence 4678888887665 33445566665 8999999988777766554 236778888886532 1 124
Q ss_pred ceeEEEecccc
Q 026688 132 SIDAVHAGAAI 142 (235)
Q Consensus 132 ~~D~i~~~~~l 142 (235)
..|+++.+...
T Consensus 84 ~id~li~~Ag~ 94 (249)
T 3f9i_A 84 NLDILVCNAGI 94 (249)
T ss_dssp CCSEEEECCC-
T ss_pred CCCEEEECCCC
Confidence 68999987654
No 415
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=91.53 E-value=2.6 Score=31.59 Aligned_cols=81 Identities=16% Similarity=0.283 Sum_probs=50.0
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..+++.+. +|++++.++..++...+.+..... ..++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFE--PQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSC--GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhcC--CCceEEEecCCCCHHHHHHHHHHHHH
Confidence 567888887654 33445555665 899999998776665554433110 235778888987632 00
Q ss_pred -CCceeEEEecccccccC
Q 026688 130 -SSSIDAVHAGAAIHCWS 146 (235)
Q Consensus 130 -~~~~D~i~~~~~l~~~~ 146 (235)
-+..|+++.+.......
T Consensus 83 ~~g~id~lv~~Ag~~~~~ 100 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEK 100 (267)
T ss_dssp HHSCCCEEEECCCCCCSS
T ss_pred HcCCCCEEEECCCCCChh
Confidence 13579999876654333
No 416
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.50 E-value=3.5 Score=31.03 Aligned_cols=71 Identities=8% Similarity=0.130 Sum_probs=48.2
Q ss_pred CCeEEEecCCCchHHHHHHH----cCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEE
Q 026688 62 GGNIIDASCGSGLFSRIFAK----SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 137 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~~l~~----~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 137 (235)
.++||-.|+ |.++..+++ .+. +|++++.++........ .+++++.+|+.++. ...+|+|+
T Consensus 5 ~~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi 68 (286)
T 3ius_A 5 TGTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLL 68 (286)
T ss_dssp CCEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEE
T ss_pred cCcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEE
Confidence 368999995 666665554 344 89999998865443322 35888999998765 46789999
Q ss_pred ecccccccCCh
Q 026688 138 AGAAIHCWSSP 148 (235)
Q Consensus 138 ~~~~l~~~~~~ 148 (235)
.........++
T Consensus 69 ~~a~~~~~~~~ 79 (286)
T 3ius_A 69 ISTAPDSGGDP 79 (286)
T ss_dssp ECCCCBTTBCH
T ss_pred ECCCccccccH
Confidence 76655433333
No 417
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.46 E-value=0.84 Score=34.22 Aligned_cols=102 Identities=14% Similarity=0.026 Sum_probs=60.8
Q ss_pred CCeEEEecCCCchHHH----HHHH-cCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC--
Q 026688 62 GGNIIDASCGSGLFSR----IFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G~~~~----~l~~-~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 129 (235)
+++||-.|++ |.+.. .|++ .+. .|++++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 4677776654 44444 4444 444 8999999987777666655543 236788889987632 00
Q ss_pred ---CCceeEEEecccccccC----C-h--------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 130 ---SSSIDAVHAGAAIHCWS----S-P--------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 130 ---~~~~D~i~~~~~l~~~~----~-~--------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+.+|+++.+....... . . ..+++.+.+.++++|.++....
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 13789999765432211 1 1 1245556666666777776543
No 418
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.42 E-value=0.93 Score=37.68 Aligned_cols=91 Identities=11% Similarity=0.015 Sum_probs=55.3
Q ss_pred CCCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEE
Q 026688 59 PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 137 (235)
Q Consensus 59 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 137 (235)
..++++|+-+|+|. |......++.. ..+|+++|.++.-++.+++. ...+ .++.+. -...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----------Ga~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----------GFDV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----------CCEE--ecHHHH---HhCCCEEE
Confidence 34588999999986 55555554443 35999999999877666531 1222 233221 13579998
Q ss_pred ecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 138 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
....-.++- -.+..+.++|||.++....
T Consensus 335 ~atgt~~~i-----~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 335 TATGNKDII-----MLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp ECSSSSCSB-----CHHHHHHSCTTCEEEECSS
T ss_pred ECCCCHHHH-----HHHHHHhcCCCcEEEEeCC
Confidence 753322211 1256677899998875443
No 419
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.41 E-value=3 Score=31.56 Aligned_cols=73 Identities=21% Similarity=0.238 Sum_probs=49.9
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..|++.+. +|+.+|.+++.++...+.+ ..++.++..|+.+.. +.
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKI-------GCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH-------CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc-------CCcceEEEecCCCHHHHHHHHHHHHH
Confidence 567888887665 34456666665 9999999988777665554 236778888987632 00
Q ss_pred -CCceeEEEeccccc
Q 026688 130 -SSSIDAVHAGAAIH 143 (235)
Q Consensus 130 -~~~~D~i~~~~~l~ 143 (235)
-+..|+++.+....
T Consensus 100 ~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 100 AFGGVDKLVANAGVV 114 (277)
T ss_dssp HHSSCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 14689999876554
No 420
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.37 E-value=0.28 Score=38.45 Aligned_cols=58 Identities=21% Similarity=0.122 Sum_probs=41.3
Q ss_pred CCeeEEeccccc-CC-CCCCceeEEEeccccccc-----C---------ChHHHHHHHHHhccCCcEEEEEEec
Q 026688 114 ENFLLVRADISR-LP-FASSSIDAVHAGAAIHCW-----S---------SPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 114 ~~~~~~~~d~~~-~~-~~~~~~D~i~~~~~l~~~-----~---------~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
....++++|..+ +. ++.+++|+|++.--.... . .....++++.++|+|||.+++....
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 357788999865 32 456889999987443211 1 1347788999999999999987643
No 421
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.22 E-value=3.4 Score=31.13 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=48.8
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..+++.+. +|++++.++..++...+.+...+. ..++.++.+|+.+.. +.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGY--PGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC--SSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcCC--CceEEEEEecCCCHHHHHHHHHHHHH
Confidence 567887776554 23344555554 899999998777766655554321 235778888987632 00
Q ss_pred -CCceeEEEecccc
Q 026688 130 -SSSIDAVHAGAAI 142 (235)
Q Consensus 130 -~~~~D~i~~~~~l 142 (235)
.+.+|+++.+...
T Consensus 108 ~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 108 QHSGVDICINNAGL 121 (279)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 1368999977654
No 422
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.16 E-value=1.9 Score=32.81 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=51.9
Q ss_pred CeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 63 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 63 ~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
.+|.-||+|. | .++..+.+.++...|+++|.+++.++.+.+ .+. ......|..+. ....|+|+..-
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~-----~~~~~~~~~~~---~~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGI-----VDEATADFKVF---AALADVIILAV 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTS-----CSEEESCTTTT---GGGCSEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCC-----cccccCCHHHh---hcCCCEEEEcC
Confidence 5799999986 4 344556666434589999999887766544 111 11122333221 13578888643
Q ss_pred cccccCChHHHHHHHHHh-ccCCcEEE
Q 026688 141 AIHCWSSPSTGVAEISRV-LRPGGVFV 166 (235)
Q Consensus 141 ~l~~~~~~~~~l~~~~~~-L~pgG~li 166 (235)
-.... ..+++++... ++++..++
T Consensus 75 p~~~~---~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 75 PIKKT---IDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp CHHHH---HHHHHHHHTSCCCTTCEEE
T ss_pred CHHHH---HHHHHHHHhcCCCCCCEEE
Confidence 32221 4566777777 77765444
No 423
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=91.07 E-value=3.9 Score=30.81 Aligned_cols=103 Identities=17% Similarity=0.157 Sum_probs=64.3
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCC-HHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS-ENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
++++|-.|++.| .++..|++.+. .|+.++.+ ...++...+.+... ..++.++.+|+.+.. +.
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQA----GGRAVAIRADNRDAEAIEQAIRETV 104 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 578888888765 34455666665 88888654 45555555555443 346788889987632 00
Q ss_pred --CCceeEEEecccccccCC-----h--------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 130 --SSSIDAVHAGAAIHCWSS-----P--------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 130 --~~~~D~i~~~~~l~~~~~-----~--------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
-+..|+++.+........ . -.+++.+.+.++++|.++....
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 136899998765432211 1 1346677778888888877654
No 424
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=91.05 E-value=2.6 Score=32.23 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=63.8
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCC--HHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C---
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS--ENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s--~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~--- 128 (235)
++++|-.|++.| .++..|++.+. +|+.++.+ ....+...+.+... ..++.++.+|+.+.. +
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHT----TCCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHc----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 578888887665 33445666665 88888876 34445554444433 346788888987632 0
Q ss_pred --CCCceeEEEecccccc-cC-----Ch--------------HHHHHHHHHhccCCcEEEEEEec
Q 026688 129 --ASSSIDAVHAGAAIHC-WS-----SP--------------STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 129 --~~~~~D~i~~~~~l~~-~~-----~~--------------~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.-+..|+++.+..... .. +. -.+++.+.+.++++|.++.....
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 0147899998765432 11 11 13456677778888888776543
No 425
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=91.01 E-value=1.2 Score=33.33 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=63.0
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEE-eCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVAL-DYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
++++|-.|++.| .++..|++.+. +|+.+ +.++...+...+.+... ..++.++.+|+.+.. +.
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKL----GRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTT----TSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 578888887765 34455666665 78877 66666666666655443 346788899987632 00
Q ss_pred --CCceeEEEeccccc-c---cCC--h--------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 130 --SSSIDAVHAGAAIH-C---WSS--P--------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 130 --~~~~D~i~~~~~l~-~---~~~--~--------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
-+..|+++.+.... . +.+ . -.+++.+.+.++++|.++....
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 14789999775432 1 111 1 1235566666666777776543
No 426
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.95 E-value=2.4 Score=33.61 Aligned_cols=89 Identities=13% Similarity=0.069 Sum_probs=53.9
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
..+|.-||+|. | .++..+++.+. .|+++|.+++.++.+.+. .+. ...+..+.--.....|+|++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~--~V~v~dr~~~~~~~l~~~----------g~~-~~~s~~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH--ECVVYDLNVNAVQALERE----------GIA-GARSIEEFCAKLVKPRVVWLM 88 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHTT----------TCB-CCSSHHHHHHHSCSSCEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHC----------CCE-EeCCHHHHHhcCCCCCEEEEe
Confidence 46899999985 4 44556666665 899999999877665431 111 112222211111345998864
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li 166 (235)
-.-. ....++..+...+++|..++
T Consensus 89 vp~~---~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 89 VPAA---VVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp SCGG---GHHHHHHHHGGGCCTTCEEE
T ss_pred CCHH---HHHHHHHHHHhhCCCCCEEE
Confidence 3332 34567788888888876554
No 427
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=90.94 E-value=3.4 Score=31.01 Aligned_cols=78 Identities=13% Similarity=0.151 Sum_probs=50.9
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-CCCc
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-ASSS 132 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-~~~~ 132 (235)
++++|-.|++.| ..+..+++.+. +|+.+|.+++.++...+.+..... ...+.++..|+.+.. . .-+.
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQYP--DAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHCT--TCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCC--CceEEEEecCCCCHHHHHHHHHhcCC
Confidence 567887777654 33445566665 899999998887776666654321 235677888886531 0 1246
Q ss_pred eeEEEeccccc
Q 026688 133 IDAVHAGAAIH 143 (235)
Q Consensus 133 ~D~i~~~~~l~ 143 (235)
.|+++.+....
T Consensus 86 id~lv~nAg~~ 96 (267)
T 3t4x_A 86 VDILINNLGIF 96 (267)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999876543
No 428
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=90.92 E-value=0.23 Score=39.91 Aligned_cols=42 Identities=21% Similarity=0.112 Sum_probs=30.8
Q ss_pred CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q 026688 61 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 103 (235)
Q Consensus 61 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~ 103 (235)
++.+|+-+|+|. |.....+++.. .++|+++|.++.-.+.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 578999999986 55555555543 3489999999877666654
No 429
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.92 E-value=2.1 Score=32.18 Aligned_cols=77 Identities=16% Similarity=0.199 Sum_probs=54.1
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----------C
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----------F 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 128 (235)
++++|--|++.| ..+..|++.+. +|..+|.+++.++.+.+.+... ..++.++.+|+.+.. -
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRK----GYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 667777777665 33456666665 9999999999888877777654 346778888987632 1
Q ss_pred CCCceeEEEecccccc
Q 026688 129 ASSSIDAVHAGAAIHC 144 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~ 144 (235)
.-+..|+++.+..+..
T Consensus 83 ~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 83 EGIHVDILINNAGIQY 98 (255)
T ss_dssp TTCCCCEEEECCCCCC
T ss_pred HCCCCcEEEECCCCCC
Confidence 1257899998765543
No 430
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.84 E-value=0.22 Score=40.27 Aligned_cols=42 Identities=21% Similarity=0.132 Sum_probs=30.9
Q ss_pred CCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHH
Q 026688 61 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 103 (235)
Q Consensus 61 ~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~ 103 (235)
++.+|+-+|+|. |.....+++.. .+.|+++|.++..++.++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 478999999986 65555555543 3589999999987776643
No 431
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.74 E-value=2.2 Score=32.32 Aligned_cols=90 Identities=14% Similarity=0.174 Sum_probs=51.8
Q ss_pred CeEEEecCCC-ch-HHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCC-ceeEEEec
Q 026688 63 GNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS-SIDAVHAG 139 (235)
Q Consensus 63 ~~vLdiG~G~-G~-~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~D~i~~~ 139 (235)
++|.-||+|. |. ++..+.+.+...+|+++|.+++.++.+++ .+. .. ....|..+. .. ..|+|+..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~----~~-~~~~~~~~~---~~~~aDvVila 69 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGI----ID-EGTTSIAKV---EDFSPDFVMLS 69 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTS----CS-EEESCGGGG---GGTCCSEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHH----CCC----cc-cccCCHHHH---hcCCCCEEEEc
Confidence 3688899886 43 34455555433479999999987776553 111 11 112233221 13 67999864
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
--... ...++.++...++++..++.
T Consensus 70 vp~~~---~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 70 SPVRT---FREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp SCHHH---HHHHHHHHHHHSCTTCEEEE
T ss_pred CCHHH---HHHHHHHHHhhCCCCcEEEE
Confidence 32221 23567778888888775443
No 432
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=90.72 E-value=0.36 Score=36.46 Aligned_cols=54 Identities=6% Similarity=-0.033 Sum_probs=34.5
Q ss_pred eeEEecccccC--CCCCCceeEEEeccccccc----C----------ChHHHHHHHHHhccCCcEEEEEE
Q 026688 116 FLLVRADISRL--PFASSSIDAVHAGAAIHCW----S----------SPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 116 ~~~~~~d~~~~--~~~~~~~D~i~~~~~l~~~----~----------~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
..++++|..+. .++.+++|+|++.--...- + -....+.++.++|+|+|.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 34667776442 2345688888875332211 1 11367788899999999998864
No 433
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.65 E-value=1.8 Score=35.16 Aligned_cols=93 Identities=17% Similarity=0.284 Sum_probs=59.8
Q ss_pred CCeEEEecCCC-chHHH-HHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----CCCCceeE
Q 026688 62 GGNIIDASCGS-GLFSR-IFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 135 (235)
Q Consensus 62 ~~~vLdiG~G~-G~~~~-~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 135 (235)
..+|+-+|+|. |.... .|.+.+. .|+++|.+++.++.+++. .+.++.+|..+.. ......|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~~----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRKF----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHHT----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHhC----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 46799999875 43333 3333444 899999999998887642 3557888887632 22356888
Q ss_pred EEecccccccCChH--HHHHHHHHhccCCcEEEEEEec
Q 026688 136 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 136 i~~~~~l~~~~~~~--~~l~~~~~~L~pgG~li~~~~~ 171 (235)
|++.. ++.. ..+-...+.+.|...++.-...
T Consensus 72 viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 72 LINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred EEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 88532 3332 3445566677788777775543
No 434
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.64 E-value=2.5 Score=31.91 Aligned_cols=85 Identities=13% Similarity=0.147 Sum_probs=50.5
Q ss_pred eEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEeccc
Q 026688 64 NIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 141 (235)
Q Consensus 64 ~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 141 (235)
+|.-||+|. | .++..+.+.+. +|+++|.+++.++.+.+ .+. ... ...|..+. ...|+|+..-.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~----~g~----~~~-~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVE----RQL----VDE-AGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH----TTS----CSE-EESCGGGG----TTCSEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHh----CCC----Ccc-ccCCHHHh----CCCCEEEEECC
Confidence 678899886 4 34445556554 89999999987766543 111 111 22333322 45799886433
Q ss_pred ccccCChHHHHHHHHHhccCCcEEE
Q 026688 142 IHCWSSPSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 142 l~~~~~~~~~l~~~~~~L~pgG~li 166 (235)
-. ....+++++...++|+..++
T Consensus 67 ~~---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 IQ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HH---HHHHHHHHHGGGSCTTCEEE
T ss_pred HH---HHHHHHHHHHhhCCCCCEEE
Confidence 22 12466777878888876543
No 435
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=90.61 E-value=2.6 Score=31.73 Aligned_cols=77 Identities=19% Similarity=0.229 Sum_probs=50.9
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCC------------HHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
++++|-.|++.| .++..|++.+. +|+.+|.+ ++.++...+.+... ..++.++.+|+.+.
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRDR 86 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTCH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCCH
Confidence 577888887665 34556666665 89999976 66666655555443 34788899999763
Q ss_pred C-----CC-----CCceeEEEecccccc
Q 026688 127 P-----FA-----SSSIDAVHAGAAIHC 144 (235)
Q Consensus 127 ~-----~~-----~~~~D~i~~~~~l~~ 144 (235)
. +. -+..|+++.+..+..
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 2 10 147899998766543
No 436
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.40 E-value=1.9 Score=33.07 Aligned_cols=103 Identities=18% Similarity=0.164 Sum_probs=64.1
Q ss_pred CCeEEEecCCC----c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC--
Q 026688 62 GGNIIDASCGS----G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 129 (235)
Q Consensus 62 ~~~vLdiG~G~----G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~-- 129 (235)
++++|-.|++. | .++..|++.+. +|+.+|.++...+.+.+..... .++.++.+|+.+.. +.
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHHH
Confidence 57888888753 3 24556666665 8999999876555555544432 24678888987632 00
Q ss_pred ---CCceeEEEeccccccc---------CCh--------------HHHHHHHHHhccCCcEEEEEEec
Q 026688 130 ---SSSIDAVHAGAAIHCW---------SSP--------------STGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 130 ---~~~~D~i~~~~~l~~~---------~~~--------------~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
-+..|+++.+..+... .+. ..+++.+.+.++++|.++.....
T Consensus 103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~ 170 (296)
T 3k31_A 103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY 170 (296)
T ss_dssp HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence 1478999987654321 111 13455666777778888876543
No 437
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=90.08 E-value=4.5 Score=30.03 Aligned_cols=75 Identities=19% Similarity=0.271 Sum_probs=48.4
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..|++.+. +|+.++.++..++...+.+... ..++.++..|+.+.. +.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQA----GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 356777776554 33445555665 8999999987776665555433 236778888987632 00
Q ss_pred -CCceeEEEecccc
Q 026688 130 -SSSIDAVHAGAAI 142 (235)
Q Consensus 130 -~~~~D~i~~~~~l 142 (235)
-+..|+++.+...
T Consensus 76 ~~g~id~lv~nAg~ 89 (256)
T 1geg_A 76 TLGGFDVIVNNAGV 89 (256)
T ss_dssp HTTCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 1378999987654
No 438
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=90.04 E-value=3.1 Score=31.31 Aligned_cols=103 Identities=19% Similarity=0.210 Sum_probs=63.5
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEe-CCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALD-YSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D-~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
++++|-.|++.| ..+..|++.+. .|+.++ .++...+...+.+... ..++.++..|+.+.. +.
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAA----GGKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 578888887765 34456666665 777764 4555666655555443 346888889987632 00
Q ss_pred --CCceeEEEecccccccCC-----h--------------HHHHHHHHHhccCCcEEEEEEe
Q 026688 130 --SSSIDAVHAGAAIHCWSS-----P--------------STGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 130 --~~~~D~i~~~~~l~~~~~-----~--------------~~~l~~~~~~L~pgG~li~~~~ 170 (235)
-+..|+++.+..+..... . -.+++.+.+.++++|.++....
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 147899998765433211 1 1245567777777888776553
No 439
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=89.97 E-value=2.5 Score=31.66 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=46.7
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeC-CHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
+++||-.|++.| .++..+++++. +|++++. ++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKL----GAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHH
Confidence 567887776543 23344555554 8999998 776666655555443 236788889987632 10
Q ss_pred --CCceeEEEecccc
Q 026688 130 --SSSIDAVHAGAAI 142 (235)
Q Consensus 130 --~~~~D~i~~~~~l 142 (235)
-+..|+++.+...
T Consensus 95 ~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHSCEEEEECCCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1368999976554
No 440
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=89.96 E-value=2.3 Score=33.82 Aligned_cols=93 Identities=8% Similarity=0.013 Sum_probs=56.6
Q ss_pred CCCCeEEEecCC--CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-----CCCCCc
Q 026688 60 VLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----PFASSS 132 (235)
Q Consensus 60 ~~~~~vLdiG~G--~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~ 132 (235)
.++.+||-.|++ .|..+..+++.. .++|+++. ++.-++.+++. + -..++...-.+. ....+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l----G-----a~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR----G-----AEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT----T-----CSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc----C-----CcEEEECCCchHHHHHHHHccCC
Confidence 567899999983 578888887764 35888875 77777766542 1 111222111111 011245
Q ss_pred eeEEEecccccccCChHHHHHHHHHhc-cCCcEEEEEE
Q 026688 133 IDAVHAGAAIHCWSSPSTGVAEISRVL-RPGGVFVGTT 169 (235)
Q Consensus 133 ~D~i~~~~~l~~~~~~~~~l~~~~~~L-~pgG~li~~~ 169 (235)
+|+|+-.- .. ...+..+.+.| +++|+++...
T Consensus 232 ~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCI-----TN-VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESS-----CS-HHHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECC-----Cc-hHHHHHHHHHhhcCCCEEEEEe
Confidence 89998422 22 24577788888 6999988754
No 441
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=89.95 E-value=4.2 Score=31.10 Aligned_cols=78 Identities=24% Similarity=0.312 Sum_probs=49.0
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..|++.+. +|+.++.+++.++...+.+...+. ...++.++.+|+.+.. +.
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGV-PAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTC-CGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 567777776554 33445555555 899999998877766655544210 0115788889987632 10
Q ss_pred -CCceeEEEecccc
Q 026688 130 -SSSIDAVHAGAAI 142 (235)
Q Consensus 130 -~~~~D~i~~~~~l 142 (235)
-+..|+++.+...
T Consensus 103 ~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 103 KFGKIDILVNNAGA 116 (297)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 1368999987654
No 442
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=89.85 E-value=4.8 Score=30.40 Aligned_cols=103 Identities=15% Similarity=0.232 Sum_probs=60.2
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHH-HHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSEN-MLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~-~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
++++|-.|++.| ..+..|++.+. +|++++.++. ..+...+.+... ..++.++..|+.+.. +.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKN----GSDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHh----CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 567777777654 23344555554 8999988754 344444444332 236778888886532 00
Q ss_pred --CCceeEEEecccccccC-----ChH--------------HHHHHHHHhccCCcEEEEEEe
Q 026688 130 --SSSIDAVHAGAAIHCWS-----SPS--------------TGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 130 --~~~~D~i~~~~~l~~~~-----~~~--------------~~l~~~~~~L~pgG~li~~~~ 170 (235)
-+..|+++.+....... +.+ .+++.+.+.++.+|.++....
T Consensus 103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 13689999876543321 111 234666677767788777654
No 443
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=89.82 E-value=4.2 Score=29.66 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=51.3
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..+++.+. .|+.++.+++.++...+.+.... ..++.+..+|+.+.. +.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ---GVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH---CCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc---CCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 457777777654 33445556665 89999999887777666554221 347888899997632 11
Q ss_pred -CCceeEEEecccccc
Q 026688 130 -SSSIDAVHAGAAIHC 144 (235)
Q Consensus 130 -~~~~D~i~~~~~l~~ 144 (235)
-+..|+++.+..+.+
T Consensus 77 ~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 77 RFGDVDVVVANAGLGY 92 (235)
T ss_dssp HHSSCSEEEECCCCCC
T ss_pred hcCCCCEEEECCcccc
Confidence 136899998766543
No 444
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=89.78 E-value=1.3 Score=30.59 Aligned_cols=111 Identities=15% Similarity=0.149 Sum_probs=64.1
Q ss_pred HHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccC-CC
Q 026688 50 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF 128 (235)
Q Consensus 50 ~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-~~ 128 (235)
+.+....+... +.-|||+|-|.|..=-++.+..|+..++++|-.-.. ++....+.-.++.+|+.+. +.
T Consensus 30 L~~a~~~v~~~-~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~----------hp~~~P~~e~~ilGdi~~tL~~ 98 (174)
T 3iht_A 30 LEHAIAQTAGL-SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS----------HPDSTPPEAQLILGDIRETLPA 98 (174)
T ss_dssp HHHHHHHTTTC-CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC----------CGGGCCCGGGEEESCHHHHHHH
T ss_pred HHHHHHHhcCC-CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc----------CCCCCCchHheecccHHHHHHH
Confidence 34444444433 578999999999999999999999999999962110 0000022345677777552 21
Q ss_pred C----CCceeEEEecccccccCChH----HHHHHHHHhccCCcEEEEEEec
Q 026688 129 A----SSSIDAVHAGAAIHCWSSPS----TGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 129 ~----~~~~D~i~~~~~l~~~~~~~----~~l~~~~~~L~pgG~li~~~~~ 171 (235)
. ....-++-+....++-.... .+-..+..+|.|||.++-..+.
T Consensus 99 ~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 99 TLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp HHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred HHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 0 12233333333333211111 2234567789999988765443
No 445
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.78 E-value=7.4 Score=32.02 Aligned_cols=95 Identities=19% Similarity=0.262 Sum_probs=57.2
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhh-------cC----CC-CCCCeeEEecccccCC
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-------ES----NF-PKENFLLVRADISRLP 127 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~----~~-~~~~~~~~~~d~~~~~ 127 (235)
..+|.-||+|. | .++..+++.+. .|+++|.+++.++.+++.+.. .+ .. ......+ ..|...
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE-- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH--
Confidence 46799999997 4 44556666665 899999999888877653321 00 00 0011222 344321
Q ss_pred CCCCceeEEEecccccccCCh---HHHHHHHHHhccCCcEEEE
Q 026688 128 FASSSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~---~~~l~~~~~~L~pgG~li~ 167 (235)
-...|+|+..-. .+. ..+++++...++|+..++.
T Consensus 112 --~~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 --LSTVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --GTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HCCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 245799885432 122 4677888888988766553
No 446
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.70 E-value=4.2 Score=31.09 Aligned_cols=99 Identities=10% Similarity=0.042 Sum_probs=53.4
Q ss_pred CeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec---ccccCCCCCCceeEEE
Q 026688 63 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA---DISRLPFASSSIDAVH 137 (235)
Q Consensus 63 ~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~D~i~ 137 (235)
.+|.-+|+|. | .++..+++.+. +|+++|.+++.++..++.-..... ......... +..+..-.-..+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN--DVTLIDQWPAHIEAIRKNGLIADF--NGEEVVANLPIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHCEEEEE--TTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHhCCEEEEe--CCCeeEecceeecchhhcccCCCCCEEE
Confidence 4799999986 4 44455666665 899999998877766543100000 000000000 1111110012689988
Q ss_pred ecccccccCChHHHHHHHHHhccCCcEEEEE
Q 026688 138 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~ 168 (235)
..---.. ...+++.+...++|+..++..
T Consensus 80 ~~v~~~~---~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 80 ALTKAQQ---LDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp ECSCHHH---HHHHHHHHGGGCCTTCEEEEC
T ss_pred EEecccc---HHHHHHHHHHhcCCCCEEEEe
Confidence 6443221 246777888888887655543
No 447
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.46 E-value=2.4 Score=31.70 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=54.2
Q ss_pred CCeEEEecC-CCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 62 GGNIIDASC-GSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 62 ~~~vLdiG~-G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
++++|-.|+ |.| .++..+++.+. .|+.++.++..++...+.+...+ ..++.++..|+.+.. +.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG---LGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC---SSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC---CCceEEEEeCCCCHHHHHHHHHHHH
Confidence 678888887 554 34556666665 89999999988888777765432 357899999997632 00
Q ss_pred --CCceeEEEeccccc
Q 026688 130 --SSSIDAVHAGAAIH 143 (235)
Q Consensus 130 --~~~~D~i~~~~~l~ 143 (235)
.+..|+++.+..+.
T Consensus 97 ~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCCcEEEECCCcC
Confidence 13689999876543
No 448
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.46 E-value=2.5 Score=31.79 Aligned_cols=75 Identities=29% Similarity=0.357 Sum_probs=54.2
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----------C
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----------F 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 128 (235)
++.+|--|++.| ..+..|++.+. .|..+|.+++.++...+.+... ..++.++.+|+.+.. -
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~----g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGM----GKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 677888787776 34455666665 9999999999988888877665 346888999997632 0
Q ss_pred CCCceeEEEecccc
Q 026688 129 ASSSIDAVHAGAAI 142 (235)
Q Consensus 129 ~~~~~D~i~~~~~l 142 (235)
.-+..|+++.+..+
T Consensus 81 ~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 81 TYSRIDVLCNNAGI 94 (254)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 11578999987653
No 449
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.39 E-value=1.5 Score=33.37 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=55.9
Q ss_pred CeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc---------CCCCC------CCeeEEeccccc
Q 026688 63 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPK------ENFLLVRADISR 125 (235)
Q Consensus 63 ~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~---------~~~~~------~~~~~~~~d~~~ 125 (235)
++|.-||+|. | .++..+++.+. +|+.+|.+++.++.+.+.+... ..... .++. ...|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~-~~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIR-YSDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCE-EESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeE-EeCCHHH
Confidence 5788899986 3 44555666665 8999999999888887653211 00000 0122 2233322
Q ss_pred CCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEE
Q 026688 126 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 126 ~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li 166 (235)
. -...|+|+..-.-. ......+++++...++|+..++
T Consensus 82 ~---~~~aDlVi~av~~~-~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 82 A---VKDADLVIEAVPES-LDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H---TTTCSEEEECCCSC-HHHHHHHHHHHHHHSCTTCEEE
T ss_pred H---hccCCEEEEeccCc-HHHHHHHHHHHHhhCCCCcEEE
Confidence 1 24579988432110 0112467888888898876554
No 450
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=89.14 E-value=0.44 Score=37.62 Aligned_cols=98 Identities=14% Similarity=0.054 Sum_probs=54.1
Q ss_pred hhcCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEec--cccc-C-CC
Q 026688 55 GYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA--DISR-L-PF 128 (235)
Q Consensus 55 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~--d~~~-~-~~ 128 (235)
+.....++.+||-.|+ | .|..+..+++......|++++ ++.-.+.++ + + .. .++.. |..+ . ..
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~---g---a~--~~~~~~~~~~~~~~~~ 204 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--D---S---VT--HLFDRNADYVQEVKRI 204 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--G---G---SS--EEEETTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--c---C---Cc--EEEcCCccHHHHHHHh
Confidence 4455667899999998 3 377777777754345888888 554444443 1 1 11 11211 1111 0 11
Q ss_pred CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 129 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
..+.+|+|+-...-. .+..+.++|+++|.+++...
T Consensus 205 ~~~g~Dvv~d~~g~~-------~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 205 SAEGVDIVLDCLCGD-------NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp CTTCEEEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred cCCCceEEEECCCch-------hHHHHHHHhhcCCEEEEECC
Confidence 235799999432211 24678899999999987653
No 451
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=89.11 E-value=2.8 Score=31.11 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=53.0
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
++++|-.|++.| .++..|++.+. +|+.++.+++.++...+.+...... ..++.++..|+.+.. +
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGY--RVVLIARSKQNLEKVHDEIMRSNKH-VQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTC--EEEEEESCHHHHHHHHHHHHHHCTT-SCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhccc-cCcceEEeccCCCHHHHHHHHHHHHH
Confidence 567888887765 34556666665 8999999998888777766543210 246788889987632 0
Q ss_pred CCCceeEEEecccc
Q 026688 129 ASSSIDAVHAGAAI 142 (235)
Q Consensus 129 ~~~~~D~i~~~~~l 142 (235)
.-+..|+++.+..+
T Consensus 84 ~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 84 KYGAVDILVNAAAM 97 (250)
T ss_dssp HHCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 01478999987655
No 452
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.01 E-value=4.2 Score=31.49 Aligned_cols=95 Identities=13% Similarity=0.158 Sum_probs=55.6
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeE-----EecccccCCCCCCcee
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLL-----VRADISRLPFASSSID 134 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~-----~~~d~~~~~~~~~~~D 134 (235)
..+|.-+|+|. | .++..|++.+. .|+.+ .+++.++..++.-.... .....+ ...|... ...+|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~--~V~l~-~~~~~~~~i~~~g~~~~---~~~~~~~~~~~~~~~~~~----~~~~D 88 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH--EVILI-ARPQHVQAIEATGLRLE---TQSFDEQVKVSASSDPSA----VQGAD 88 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC--EEEEE-CCHHHHHHHHHHCEEEE---CSSCEEEECCEEESCGGG----GTTCS
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC--eEEEE-EcHhHHHHHHhCCeEEE---cCCCcEEEeeeeeCCHHH----cCCCC
Confidence 57899999996 4 45556666665 88888 88877777665311100 001111 0112211 24689
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
+|+..---. +...+++.+...++|+..++...
T Consensus 89 ~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 89 LVLFCVKST---DTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp EEEECCCGG---GHHHHHHHHTTTSCTTCEEEEEC
T ss_pred EEEEEcccc---cHHHHHHHHHHhcCCCCEEEEeC
Confidence 988643333 23577888888888887655443
No 453
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.77 E-value=2.4 Score=33.02 Aligned_cols=94 Identities=12% Similarity=0.210 Sum_probs=57.7
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhh-------cCCCCC--------CCeeEEecccc
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-------ESNFPK--------ENFLLVRADIS 124 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~~~~~--------~~~~~~~~d~~ 124 (235)
..+|--||+|. | .++..+++.+. .|+++|.+++.++.+.+++.. .+..+. .++++ ..|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 36788999986 3 55667777776 899999999998888765321 111000 02232 23332
Q ss_pred cCCCCCCceeEEEecccccccCC-h---HHHHHHHHHhccCCcEEE
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSS-P---STGVAEISRVLRPGGVFV 166 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~-~---~~~l~~~~~~L~pgG~li 166 (235)
+. -...|+|+.. +++ . ..+++++...++|+..++
T Consensus 83 ea---v~~aDlViea-----vpe~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 83 EA---VEGVVHIQEC-----VPENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp HH---TTTEEEEEEC-----CCSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred HH---HhcCCEEEEe-----ccCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 21 2467998843 333 2 367788888898877554
No 454
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.56 E-value=3.7 Score=31.21 Aligned_cols=84 Identities=15% Similarity=0.152 Sum_probs=50.7
Q ss_pred CeEEEecC-CC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 63 GNIIDASC-GS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 63 ~~vLdiG~-G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
.+|.-||+ |. | .++..+.+.+. +|+++|.+++.++.+.+ .+ +.. .+..+. ....|+|+..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~----~g------~~~--~~~~~~---~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEGRDRLQG----MG------IPL--TDGDGW---IDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHHHHHHHH----TT------CCC--CCSSGG---GGTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHh----cC------CCc--CCHHHH---hcCCCEEEEc
Confidence 58999999 85 4 44555666654 89999999887766654 11 111 122221 2457999864
Q ss_pred ccccccCChHHHHHHHHHhccCCcEEE
Q 026688 140 AAIHCWSSPSTGVAEISRVLRPGGVFV 166 (235)
Q Consensus 140 ~~l~~~~~~~~~l~~~~~~L~pgG~li 166 (235)
-.-.. ...+++.+...++|+..++
T Consensus 75 v~~~~---~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 75 LPDNI---IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp SCHHH---HHHHHHHHGGGSCTTCEEE
T ss_pred CCchH---HHHHHHHHHHhCCCCCEEE
Confidence 33222 2456677777777765444
No 455
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.40 E-value=5.1 Score=31.52 Aligned_cols=96 Identities=11% Similarity=0.069 Sum_probs=52.0
Q ss_pred cCCCCCCeEEEecC-C-CchHHHHHHHcCCCceEE-EEeCCHH---HHHHHHHHhhhcCCCCCCCeeEEec------ccc
Q 026688 57 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVV-ALDYSEN---MLKQCYEFVQQESNFPKENFLLVRA------DIS 124 (235)
Q Consensus 57 ~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~v~-~~D~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~------d~~ 124 (235)
....++.+||-.|+ | .|..+..+++.. .++++ .++.++. ..+.+++ .+ .. .++.. ++.
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~----lG---a~--~vi~~~~~~~~~~~ 232 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKS----LG---AE--HVITEEELRRPEMK 232 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHH----TT---CS--EEEEHHHHHSGGGG
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHh----cC---Cc--EEEecCcchHHHHH
Confidence 45667899999997 4 477777777753 23554 4444432 2344432 21 11 12211 111
Q ss_pred cCCCCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 125 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 125 ~~~~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
+..-....+|+|+-.- ..+ . .....++|+++|.++...
T Consensus 233 ~~~~~~~~~Dvvid~~-----g~~-~-~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 233 NFFKDMPQPRLALNCV-----GGK-S-STELLRQLARGGTMVTYG 270 (357)
T ss_dssp GTTSSSCCCSEEEESS-----CHH-H-HHHHHTTSCTTCEEEECC
T ss_pred HHHhCCCCceEEEECC-----CcH-H-HHHHHHhhCCCCEEEEEe
Confidence 1110112489988432 211 2 345789999999998763
No 456
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=88.19 E-value=5.5 Score=30.17 Aligned_cols=76 Identities=12% Similarity=0.115 Sum_probs=48.2
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCH-HHHHHHHHHhhhcCCCCCCCeeEEeccccc----CC-----C
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSE-NMLKQCYEFVQQESNFPKENFLLVRADISR----LP-----F 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~-~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~----~~-----~ 128 (235)
++++|-.|++.| .++..|++.+. +|+.++.++ ..++...+.+.... ..++.++.+|+.+ .. +
T Consensus 23 ~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~~~~~v~~~~ 97 (288)
T 2x9g_A 23 APAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKER---SNTAVVCQADLTNSNVLPASCEEII 97 (288)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHHS---TTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhhc---CCceEEEEeecCCccCCHHHHHHHH
Confidence 567887777655 33445566665 899999987 66665555543111 3467888899876 21 0
Q ss_pred -----CCCceeEEEecccc
Q 026688 129 -----ASSSIDAVHAGAAI 142 (235)
Q Consensus 129 -----~~~~~D~i~~~~~l 142 (235)
.-+..|+++.+..+
T Consensus 98 ~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 98 NSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 01368999987654
No 457
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.93 E-value=3.4 Score=30.95 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=59.8
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCC---HHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C--
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS---ENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s---~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~-- 128 (235)
++++|-.|++.| ..+..|++.+. +|+.++.+ .+.++...+.+... ..++.++..|+.+.. +
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQ----GAKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTT----TCEEEEEECCCCSHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHH
Confidence 577887787665 22334444444 88888764 34455544444433 346888899987632 0
Q ss_pred ---CCCceeEEEecccccccCC-----hH--------------HHHHHHHHhccCCcEEEEEEe
Q 026688 129 ---ASSSIDAVHAGAAIHCWSS-----PS--------------TGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 129 ---~~~~~D~i~~~~~l~~~~~-----~~--------------~~l~~~~~~L~pgG~li~~~~ 170 (235)
.-+..|+++.+........ .+ .+++.+.+.++++|.++....
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 0147899998765432211 11 234556666667787776543
No 458
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.79 E-value=2.7 Score=32.31 Aligned_cols=85 Identities=14% Similarity=0.130 Sum_probs=50.7
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
..+|.-||+|. | .++..+++.+. +|+++|.+++.++.+.+. + ......+..+. ....|+|+..
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~~~~~----g------~~~~~~~~~e~---~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL--STWGADLNPQACANLLAE----G------ACGAAASAREF---AGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHT----T------CSEEESSSTTT---TTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHc----C------CccccCCHHHH---HhcCCEEEEE
Confidence 46799999986 4 44556666665 899999999877766542 1 11223344332 2456888853
Q ss_pred ccccccCCh---HHHH---HHHHHhccCCcEEE
Q 026688 140 AAIHCWSSP---STGV---AEISRVLRPGGVFV 166 (235)
Q Consensus 140 ~~l~~~~~~---~~~l---~~~~~~L~pgG~li 166 (235)
++++ ..++ +.+...++||..++
T Consensus 72 -----vp~~~~~~~v~~~~~~l~~~l~~g~ivv 99 (303)
T 3g0o_A 72 -----VVNAAQVRQVLFGEDGVAHLMKPGSAVM 99 (303)
T ss_dssp -----CSSHHHHHHHHC--CCCGGGSCTTCEEE
T ss_pred -----CCCHHHHHHHHhChhhHHhhCCCCCEEE
Confidence 3333 2233 44556677766554
No 459
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=87.76 E-value=5.6 Score=30.08 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=50.0
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCC----------------HHHHHHHHHHhhhcCCCCCCCeeEEecc
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS----------------ENMLKQCYEFVQQESNFPKENFLLVRAD 122 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s----------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d 122 (235)
++++|-.|++.| ..+..|++.+. +|+.+|.+ ++.++...+.+... ..++.++..|
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D 84 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH----NRRIVTAEVD 84 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT----TCCEEEEECC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc----CCceEEEEcC
Confidence 578888888765 34556666665 89999887 56666655555443 3468888999
Q ss_pred cccCC-----C-----CCCceeEEEecccc
Q 026688 123 ISRLP-----F-----ASSSIDAVHAGAAI 142 (235)
Q Consensus 123 ~~~~~-----~-----~~~~~D~i~~~~~l 142 (235)
+.+.. + .-+..|+++.+..+
T Consensus 85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 85 VRDYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 97632 0 01478999987654
No 460
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.72 E-value=4.2 Score=30.42 Aligned_cols=88 Identities=11% Similarity=0.096 Sum_probs=51.9
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCce-EEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
..+|.-||+|. | .++..+.+.+. . |.++|.+++.++.+.+.. .+.. ..|..+. ....|+|+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~--~~v~~~~~~~~~~~~~~~~~---------g~~~-~~~~~~~---~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGF--RIVQVYSRTEESARELAQKV---------EAEY-TTDLAEV---NPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTC--CEEEEECSSHHHHHHHHHHT---------TCEE-ESCGGGS---CSCCSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHHHHHHc---------CCce-eCCHHHH---hcCCCEEEE
Confidence 35799999985 4 34445555554 5 899999998777665532 1222 2333332 135799986
Q ss_pred cccccccCChHHHHHHHHHhccCCcEEEE
Q 026688 139 GAAIHCWSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 139 ~~~l~~~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
.-.-.. ...+++.+...+++|..++-
T Consensus 75 av~~~~---~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 75 SLKDSA---FAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp CCCHHH---HHHHHHHHHTTCCTTCEEEE
T ss_pred ecCHHH---HHHHHHHHHhhcCCCcEEEE
Confidence 433221 14566777777777654443
No 461
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=87.66 E-value=5.7 Score=30.34 Aligned_cols=75 Identities=19% Similarity=0.260 Sum_probs=50.1
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCC------------HHHHHHHHHHhhhcCCCCCCCeeEEecccccC
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISRL 126 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 126 (235)
++++|-.|++.| .++..|++.+. +|+++|.+ ++.++...+.+... ..++.++..|+.+.
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~ 101 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL----GRRIIASQVDVRDF 101 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhc----CCceEEEECCCCCH
Confidence 578888888765 34455666665 89999986 56666655555443 34788899999763
Q ss_pred C-----C-----CCCceeEEEecccc
Q 026688 127 P-----F-----ASSSIDAVHAGAAI 142 (235)
Q Consensus 127 ~-----~-----~~~~~D~i~~~~~l 142 (235)
. + .-+..|+++.+...
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 2 0 01478999977654
No 462
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=87.64 E-value=3.1 Score=30.75 Aligned_cols=75 Identities=21% Similarity=0.237 Sum_probs=52.4
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..|++.+. +|+.+|.+++.++...+.+... ..++.++..|+.+.. +.
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVAD----GGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 578888887665 34555666665 8999999998888877766553 346788889987632 00
Q ss_pred -CCceeEEEecccc
Q 026688 130 -SSSIDAVHAGAAI 142 (235)
Q Consensus 130 -~~~~D~i~~~~~l 142 (235)
-+..|+++.+..+
T Consensus 83 ~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 83 EFGGIDYLVNNAAI 96 (253)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 1378999987654
No 463
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=87.60 E-value=7.4 Score=30.33 Aligned_cols=90 Identities=12% Similarity=-0.043 Sum_probs=49.5
Q ss_pred CCeEEEecCCC-chHHHHHHH-cCCCceEE-EEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 62 GGNIIDASCGS-GLFSRIFAK-SGLFSLVV-ALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 62 ~~~vLdiG~G~-G~~~~~l~~-~~~~~~v~-~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
..+|.-||||. |........ ..+..+++ .+|.+++..+...+.+ .+.....|..++ +.....|+|+.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~---------g~~~~~~~~~~~-l~~~~~D~V~i 77 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL---------GVETTYTNYKDM-IDTENIDAIFI 77 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT---------CCSEEESCHHHH-HTTSCCSEEEE
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh---------CCCcccCCHHHH-hcCCCCCEEEE
Confidence 46899999985 544333333 44555654 6799987665443321 121123444432 12346899985
Q ss_pred cccccccCChHHHHHHHHHhccCCcEEEE
Q 026688 139 GAAIHCWSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 139 ~~~l~~~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
...- ......+..+|+.|-.+++
T Consensus 78 ~tp~------~~h~~~~~~al~~G~~v~~ 100 (346)
T 3cea_A 78 VAPT------PFHPEMTIYAMNAGLNVFC 100 (346)
T ss_dssp CSCG------GGHHHHHHHHHHTTCEEEE
T ss_pred eCCh------HhHHHHHHHHHHCCCEEEE
Confidence 4321 1224555667777766665
No 464
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.39 E-value=4.2 Score=31.11 Aligned_cols=89 Identities=9% Similarity=0.020 Sum_probs=50.1
Q ss_pred CCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe-cccccCCCCCCceeEEE
Q 026688 60 VLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR-ADISRLPFASSSIDAVH 137 (235)
Q Consensus 60 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~i~ 137 (235)
..+++|+-+|+|. |......++.. ..+|+++|.++...+.+.+ . ...... .++.+. -...|+|+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~----~------g~~~~~~~~l~~~---l~~aDvVi 218 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL-GAKVKVGARESDLLARIAE----M------GMEPFHISKAAQE---LRDVDVCI 218 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----T------TSEEEEGGGHHHH---TTTCSEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----C------CCeecChhhHHHH---hcCCCEEE
Confidence 3578999999875 44443333332 2499999999865544432 1 122221 122221 24679999
Q ss_pred ecccccccCChHHHHHHHHHhccCCcEEEEE
Q 026688 138 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~ 168 (235)
.....+.+ +. ...+.++||+.++-.
T Consensus 219 ~~~p~~~i-~~-----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 219 NTIPALVV-TA-----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp ECCSSCCB-CH-----HHHHHSCTTCEEEEC
T ss_pred ECCChHHh-CH-----HHHHhcCCCCEEEEe
Confidence 76544322 22 345567898876643
No 465
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.36 E-value=5.1 Score=27.07 Aligned_cols=97 Identities=12% Similarity=0.011 Sum_probs=54.6
Q ss_pred CCeEEEecCCC-ch-HHHHHHHcCCCceEEEEeCC-HHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----CCCCcee
Q 026688 62 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYS-ENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSID 134 (235)
Q Consensus 62 ~~~vLdiG~G~-G~-~~~~l~~~~~~~~v~~~D~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D 134 (235)
..+|+-+|+|. |. +...|.+.+. .|+++|.+ ++..+...... ...+.++.+|..+.. ..-...|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~--~V~vid~~~~~~~~~~~~~~-------~~~~~~i~gd~~~~~~l~~a~i~~ad 73 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRL-------GDNADVIPGDSNDSSVLKKAGIDRCR 73 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHH-------CTTCEEEESCTTSHHHHHHHTTTTCS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--CEEEEECCChHHHHHHHHhh-------cCCCeEEEcCCCCHHHHHHcChhhCC
Confidence 45788888764 32 2233444444 89999997 45444443322 224778888876531 1235688
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+|++...-. .....+....+.+.|...++....
T Consensus 74 ~vi~~~~~d---~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 74 AILALSDND---ADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp EEEECSSCH---HHHHHHHHHHHHHTSSSCEEEECS
T ss_pred EEEEecCCh---HHHHHHHHHHHHHCCCCEEEEEEC
Confidence 888643211 112344555666667777766443
No 466
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.33 E-value=5.2 Score=30.69 Aligned_cols=90 Identities=11% Similarity=0.064 Sum_probs=51.0
Q ss_pred CCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEe-cccccCCCCCCceeEEE
Q 026688 60 VLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR-ADISRLPFASSSIDAVH 137 (235)
Q Consensus 60 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~D~i~ 137 (235)
..+++|+-+|+|. |......++.. ..+|+++|.++...+.+.+ . .+.... .++.+. -...|+|+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~----~------g~~~~~~~~l~~~---l~~aDvVi 220 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL-GANVKVGARSSAHLARITE----M------GLVPFHTDELKEH---VKDIDICI 220 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----T------TCEEEEGGGHHHH---STTCSEEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----C------CCeEEchhhHHHH---hhCCCEEE
Confidence 3578999999975 44433333332 3499999999865444332 1 122221 222221 24679999
Q ss_pred ecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 138 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.....+.+ +. ...+.++||+.++-..
T Consensus 221 ~~~p~~~i-~~-----~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 221 NTIPSMIL-NQ-----TVLSSMTPKTLILDLA 246 (300)
T ss_dssp ECCSSCCB-CH-----HHHTTSCTTCEEEECS
T ss_pred ECCChhhh-CH-----HHHHhCCCCCEEEEEe
Confidence 76655322 22 3456789987665433
No 467
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.26 E-value=1.1 Score=35.28 Aligned_cols=90 Identities=3% Similarity=-0.081 Sum_probs=53.1
Q ss_pred CeEEEe-cCC-CchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC------CCCCcee
Q 026688 63 GNIIDA-SCG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------FASSSID 134 (235)
Q Consensus 63 ~~vLdi-G~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~D 134 (235)
.+||-. |+| .|..+..+++.. .++|+++|.+++-++.+++. + . . .++..+-.+.. .....+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~----G---a-~-~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDI----G---A-A-HVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHH----T---C-S-EEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C---C-C-EEEECCcHHHHHHHHHHhcCCCCc
Confidence 466654 443 366666666653 34999999999888887652 1 1 1 12211111110 0113689
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
+|+-...- ..+..+.++|+++|.++...
T Consensus 236 ~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVTG-------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSCH-------HHHHHHHHHSCTTCEEEECC
T ss_pred EEEECCCC-------hhHHHHHhhhcCCCEEEEEe
Confidence 99854332 23477889999999999865
No 468
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=87.24 E-value=7.6 Score=28.99 Aligned_cols=73 Identities=27% Similarity=0.371 Sum_probs=47.0
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..+++.+. +|+.++.+++.++...+.+ ..++.++..|+.+.. +.
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAAL-------EAEAIAVVADVSDPKAVEAVFAEALE 76 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTC-------CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 567887777654 33445555665 8999999987666554432 135778888987632 00
Q ss_pred -CCceeEEEeccccc
Q 026688 130 -SSSIDAVHAGAAIH 143 (235)
Q Consensus 130 -~~~~D~i~~~~~l~ 143 (235)
-+..|+++.+....
T Consensus 77 ~~g~iD~lvnnAg~~ 91 (263)
T 2a4k_A 77 EFGRLHGVAHFAGVA 91 (263)
T ss_dssp HHSCCCEEEEGGGGT
T ss_pred HcCCCcEEEECCCCC
Confidence 13679999876543
No 469
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=87.21 E-value=6.9 Score=30.71 Aligned_cols=92 Identities=15% Similarity=0.070 Sum_probs=52.7
Q ss_pred CCeEEEecCCC-ch--HHHHHHHcCCCceEE-EEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEE
Q 026688 62 GGNIIDASCGS-GL--FSRIFAKSGLFSLVV-ALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 137 (235)
Q Consensus 62 ~~~vLdiG~G~-G~--~~~~l~~~~~~~~v~-~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~ 137 (235)
..+|.-||||. |. ....+. ..+..+++ .+|.+++..+...+.. .+... .|..++ +.....|+|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~-~~~~~~l~av~d~~~~~~~~~a~~~---------g~~~~-~~~~~l-l~~~~~D~V~ 94 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALE-AEPLTEVTAIASRRWDRAKRFTERF---------GGEPV-EGYPAL-LERDDVDAVY 94 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHH-HCTTEEEEEEEESSHHHHHHHHHHH---------CSEEE-ESHHHH-HTCTTCSEEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHH-hCCCeEEEEEEcCCHHHHHHHHHHc---------CCCCc-CCHHHH-hcCCCCCEEE
Confidence 46899999985 54 233444 34556666 6699887655544432 12232 555543 2245689998
Q ss_pred ecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 138 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 138 ~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.... ...-...+..+|+.|-.+++.-+.
T Consensus 95 i~tp------~~~h~~~~~~al~aGk~Vl~EKP~ 122 (350)
T 3rc1_A 95 VPLP------AVLHAEWIDRALRAGKHVLAEKPL 122 (350)
T ss_dssp ECCC------GGGHHHHHHHHHHTTCEEEEESSS
T ss_pred ECCC------cHHHHHHHHHHHHCCCcEEEeCCC
Confidence 5321 112245566677777777765554
No 470
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.16 E-value=4.4 Score=30.29 Aligned_cols=75 Identities=20% Similarity=0.175 Sum_probs=53.0
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
++++|-.|++.| ..+..|++.+. +|+.++.+++.++...+.+... ..++.++..|+.+.. +
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDT----GRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 578888888765 34556666665 8999999998888777766554 346888999997632 0
Q ss_pred CCCceeEEEecccc
Q 026688 129 ASSSIDAVHAGAAI 142 (235)
Q Consensus 129 ~~~~~D~i~~~~~l 142 (235)
.-+..|+++.+...
T Consensus 85 ~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 85 AYGRVDVVINNAFR 98 (264)
T ss_dssp HTSCCSEEEECCCS
T ss_pred HcCCCcEEEECCCC
Confidence 01478999977543
No 471
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=87.09 E-value=7 Score=28.38 Aligned_cols=72 Identities=17% Similarity=0.137 Sum_probs=46.2
Q ss_pred CeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-------CCCCc
Q 026688 63 GNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-------FASSS 132 (235)
Q Consensus 63 ~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~ 132 (235)
+++|-.|++.| .++..+++.+. +|+.++.++..++...+.+ ..++.+...|+.+.. .-...
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~~~ 72 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK--ATYLTGRSESKLSTVTNCL-------SNNVGYRARDLASHQEVEQLFEQLDSI 72 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHTC-------SSCCCEEECCTTCHHHHHHHHHSCSSC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHH-------hhccCeEeecCCCHHHHHHHHHHHhhc
Confidence 35777777655 33445555665 8999999988777665543 236778888987632 11234
Q ss_pred eeEEEeccccc
Q 026688 133 IDAVHAGAAIH 143 (235)
Q Consensus 133 ~D~i~~~~~l~ 143 (235)
+|+++.+....
T Consensus 73 ~d~lv~~Ag~~ 83 (230)
T 3guy_A 73 PSTVVHSAGSG 83 (230)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEEeCCcC
Confidence 59999776543
No 472
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.98 E-value=3.9 Score=31.34 Aligned_cols=77 Identities=22% Similarity=0.208 Sum_probs=54.3
Q ss_pred CCCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 61 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 61 ~~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
.++++|-.|++.| .++..+++.+. .|+.++.++..++.+.+.+... ..++.++..|+.+.. +.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQ----GFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 4678888888765 34455666665 8999999998888877776554 346888999997632 00
Q ss_pred --CCceeEEEeccccc
Q 026688 130 --SSSIDAVHAGAAIH 143 (235)
Q Consensus 130 --~~~~D~i~~~~~l~ 143 (235)
.+..|+++.+..+.
T Consensus 104 ~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHSSCSEEEECCCCC
T ss_pred HhCCCCCEEEECCCcC
Confidence 13789999876543
No 473
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.94 E-value=2.4 Score=31.61 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=53.1
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C----C
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----A 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----~ 129 (235)
++++|-.|++.| .++..+++.+. +|+.+|.++..++...+.+... ..++.++.+|+.+.. + .
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAA----GGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 567888887765 34455666665 8999999988887777766554 346888999987632 0 0
Q ss_pred CCceeEEEeccccc
Q 026688 130 SSSIDAVHAGAAIH 143 (235)
Q Consensus 130 ~~~~D~i~~~~~l~ 143 (235)
.+..|+++.+....
T Consensus 81 ~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 81 HAPLEVTIFNVGAN 94 (252)
T ss_dssp HSCEEEEEECCCCC
T ss_pred hCCceEEEECCCcC
Confidence 14789999876653
No 474
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=86.84 E-value=1.1 Score=35.53 Aligned_cols=97 Identities=10% Similarity=0.081 Sum_probs=54.1
Q ss_pred cCCCCC-CeEEEecC-C-CchHHHHHHHcCCCceEEEEeCCHHH----HHHHHHHhhhcCCCCCCCeeEEec------cc
Q 026688 57 LKPVLG-GNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENM----LKQCYEFVQQESNFPKENFLLVRA------DI 123 (235)
Q Consensus 57 ~~~~~~-~~vLdiG~-G-~G~~~~~l~~~~~~~~v~~~D~s~~~----~~~a~~~~~~~~~~~~~~~~~~~~------d~ 123 (235)
....++ .+||-.|+ | .|..+..+++.. .++++++..+++. .+.+++ .+ . . .++.. |+
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~----lG---a-~-~vi~~~~~~~~~~ 231 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKE----LG---A-T-QVITEDQNNSREF 231 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHH----HT---C-S-EEEEHHHHHCGGG
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHh----cC---C-e-EEEecCccchHHH
Confidence 355567 89999997 4 377777777753 3477777654432 333432 22 1 1 11211 11
Q ss_pred cc-CC-C---CCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 124 SR-LP-F---ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 124 ~~-~~-~---~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
.+ +. . ....+|+|+-...- .... .+.++|+++|.++....
T Consensus 232 ~~~i~~~t~~~~~g~Dvvid~~G~------~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 232 GPTIKEWIKQSGGEAKLALNCVGG------KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp HHHHHHHHHHHTCCEEEEEESSCH------HHHH-HHHHTSCTTCEEEECCC
T ss_pred HHHHHHHhhccCCCceEEEECCCc------hhHH-HHHHHhccCCEEEEecC
Confidence 11 10 1 12469999843221 1223 67899999999987543
No 475
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=86.82 E-value=7.6 Score=29.35 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=50.4
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeC-CHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~---- 128 (235)
++++|-.|++.| .++..|++.+. +|+.++. ++..++...+.+.... ..++.++..|+.+.. +
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGA--NIVLNGFGAPDEIRTVTDEVAGLS---SGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEECCCCHHHHHHHHHHHHTTC---SSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHhhcc---CCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 567888887665 34445666665 8999998 6666666665554432 346888889987632 0
Q ss_pred -CCCceeEEEeccccc
Q 026688 129 -ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 -~~~~~D~i~~~~~l~ 143 (235)
.-+..|+++.+....
T Consensus 100 ~~~g~iD~lv~nAg~~ 115 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQ 115 (281)
T ss_dssp HHTSSCSEEEECCCCC
T ss_pred HHCCCCCEEEECCCCC
Confidence 014789999876553
No 476
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=86.78 E-value=3.6 Score=27.97 Aligned_cols=96 Identities=19% Similarity=0.167 Sum_probs=50.6
Q ss_pred CCCeEEEecCCC-chHH-HHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----CCCCcee
Q 026688 61 LGGNIIDASCGS-GLFS-RIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSID 134 (235)
Q Consensus 61 ~~~~vLdiG~G~-G~~~-~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D 134 (235)
++.+|+-+|+|. |... ..+.+.+. .|+++|.++..++.++. . ....++..|..+.. .....+|
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~--~V~vid~~~~~~~~~~~---~------~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH--SVVVVDKNEYAFHRLNS---E------FSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGGGGSCT---T------CCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHh---c------CCCcEEEecCCCHHHHHHcCcccCC
Confidence 468999999976 5433 34444444 89999999865443321 1 12445556643311 1124688
Q ss_pred EEEecccccccCChHHHHHHHHHhccCCcEEEEEEe
Q 026688 135 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 170 (235)
Q Consensus 135 ~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~ 170 (235)
+|+....-. .....+..+.+.+.|...++....
T Consensus 87 ~Vi~~~~~~---~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 87 MVFAFTNDD---STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp EEEECSSCH---HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred EEEEEeCCc---HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 888643211 112333344454555556555443
No 477
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.73 E-value=3.9 Score=31.62 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=55.1
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEec
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 139 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~ 139 (235)
..+|.-+|+|. | ..+..++..+...++..+|++++....+....... ..++.. ..|... -...|+|+..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~----~~~i~~-t~d~~~----l~~aD~Vi~a 84 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN----LPNVEI-SKDLSA----SAHSKVVIFT 84 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT----CTTEEE-ESCGGG----GTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc----CCCeEE-eCCHHH----HCCCCEEEEc
Confidence 47899999996 3 35555666665558999999986444444433321 235554 245432 2457999976
Q ss_pred cccc------------ccCChHHHHHHHHHhccCCcEEEEEE
Q 026688 140 AAIH------------CWSSPSTGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 140 ~~l~------------~~~~~~~~l~~~~~~L~pgG~li~~~ 169 (235)
.... ..+-...+++.+.+.. |++++++.+
T Consensus 85 ag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 85 VNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp CCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 5332 1111135566677765 899887643
No 478
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.47 E-value=4.1 Score=30.43 Aligned_cols=76 Identities=22% Similarity=0.306 Sum_probs=52.1
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
++++|-.|++.| ..+..|++.+. +|+.++.+++.++.+.+.+...+ ..++.++..|+.+.. +
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGA--NVAVAGRSTADIDACVADLDQLG---SGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTS---SSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC---CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 567887777654 33445566665 89999999988887777665532 247888999997632 0
Q ss_pred CCCceeEEEecccc
Q 026688 129 ASSSIDAVHAGAAI 142 (235)
Q Consensus 129 ~~~~~D~i~~~~~l 142 (235)
.-+..|+++.+...
T Consensus 85 ~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 85 EFGGIDVVCANAGV 98 (262)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01368999987654
No 479
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=86.44 E-value=4.9 Score=29.03 Aligned_cols=90 Identities=12% Similarity=0.003 Sum_probs=52.7
Q ss_pred eEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----CCCCceeEEE
Q 026688 64 NIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDAVH 137 (235)
Q Consensus 64 ~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~i~ 137 (235)
+|+-+|+|. | .++..|.+.+. .|+++|.+++.++...+. ....++.+|..+.. ..-..+|+|+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~l~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY--GVVIINKDRELCEEFAKK---------LKATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHH---------SSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHH---------cCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 577788754 3 22333444444 899999999887765442 13567888886531 1235688888
Q ss_pred ecccccccCCh--HHHHHHHHHhccCCcEEEEEE
Q 026688 138 AGAAIHCWSSP--STGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 138 ~~~~l~~~~~~--~~~l~~~~~~L~pgG~li~~~ 169 (235)
+.. ++. ...+..+.+.+.|...++...
T Consensus 71 ~~~-----~~d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 71 ILT-----PRDEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp ECC-----SCHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred Eec-----CCcHHHHHHHHHHHHHcCCCeEEEEE
Confidence 542 222 233445555556666666533
No 480
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=86.42 E-value=5.1 Score=26.20 Aligned_cols=91 Identities=15% Similarity=0.200 Sum_probs=50.1
Q ss_pred CCeEEEecCCC-chH-HHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----CCCCceeE
Q 026688 62 GGNIIDASCGS-GLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 135 (235)
Q Consensus 62 ~~~vLdiG~G~-G~~-~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D~ 135 (235)
..+|+-+|+|. |.. +..+.+.+. +|+++|.+++.++...+.. .+.+..+|..+.. .....+|+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~~---------~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAEI---------DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHC---------SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHhc---------CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 36789998865 322 334444444 8999999987766554321 2445556654321 11246899
Q ss_pred EEecccccccCChHHHHHHHHHhccCCcEEEE
Q 026688 136 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 136 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
|+...... .....+..+.+.+.++ .++.
T Consensus 73 vi~~~~~~---~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 73 YIAVTGKE---EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EEECCSCH---HHHHHHHHHHHHTTCC-CEEE
T ss_pred EEEeeCCc---hHHHHHHHHHHHcCCC-EEEE
Confidence 88653211 1123344555667775 4544
No 481
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=86.34 E-value=4.2 Score=30.32 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=52.1
Q ss_pred CCCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC---
Q 026688 61 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 129 (235)
Q Consensus 61 ~~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~--- 129 (235)
.++++|-.|++.| .++..+++.+. +|+.++.+++.++...+.+... ..++.++..|+.+.. +.
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAA----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 3578888887654 33445555555 8999999998888777776554 346888889987632 00
Q ss_pred --CCceeEEEecccc
Q 026688 130 --SSSIDAVHAGAAI 142 (235)
Q Consensus 130 --~~~~D~i~~~~~l 142 (235)
.+..|+++.+...
T Consensus 102 ~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1468999987655
No 482
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=86.02 E-value=4.4 Score=30.15 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=52.5
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| ..+..+++.+. +|+.+|.+++.++...+.+... ..++.++..|+.+.. +.
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQA----GGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 567887777665 34445666665 8999999998887777766553 346888899987632 00
Q ss_pred -CCceeEEEeccccc
Q 026688 130 -SSSIDAVHAGAAIH 143 (235)
Q Consensus 130 -~~~~D~i~~~~~l~ 143 (235)
-+..|+++.+....
T Consensus 86 ~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 86 QFGKITVLVNNAGGG 100 (256)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 13689999876543
No 483
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=86.01 E-value=3.6 Score=30.62 Aligned_cols=75 Identities=24% Similarity=0.206 Sum_probs=51.6
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| .++..|++.+. +|+.+|.+++.++.+.+.+... ..++.++..|+.+.. +.
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIEQF----PGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCS----TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 567887777655 33445566665 8999999998888877766543 346888899997632 00
Q ss_pred -CCceeEEEecccc
Q 026688 130 -SSSIDAVHAGAAI 142 (235)
Q Consensus 130 -~~~~D~i~~~~~l 142 (235)
-+..|+++.+...
T Consensus 80 ~~g~id~lv~nAg~ 93 (257)
T 3imf_A 80 KFGRIDILINNAAG 93 (257)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 1468999987654
No 484
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=85.93 E-value=6.6 Score=28.57 Aligned_cols=71 Identities=21% Similarity=0.156 Sum_probs=44.5
Q ss_pred CCeEEEecCCC--c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCe-eEEeccccc-CCCCCCceeEE
Q 026688 62 GGNIIDASCGS--G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENF-LLVRADISR-LPFASSSIDAV 136 (235)
Q Consensus 62 ~~~vLdiG~G~--G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~~D~i 136 (235)
+++||-.|+.. | .+...|++.+. +|++++.++..++.... .++ .++.+|+.+ +.-.-+..|+|
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D~v 88 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASIDAV 88 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCSEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCCEE
Confidence 67888887643 2 23344455554 89999998876544332 256 788888862 11112478999
Q ss_pred Eecccccc
Q 026688 137 HAGAAIHC 144 (235)
Q Consensus 137 ~~~~~l~~ 144 (235)
+.+.....
T Consensus 89 i~~ag~~~ 96 (236)
T 3e8x_A 89 VFAAGSGP 96 (236)
T ss_dssp EECCCCCT
T ss_pred EECCCCCC
Confidence 98766543
No 485
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=85.89 E-value=4.6 Score=29.69 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=52.5
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC----------C
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----------F 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~----------~ 128 (235)
++++|-.|++.| .++..+++.+. +|+.++.++..++...+.+... ..++.++..|+.+.. -
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEK----GFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 567888887655 34455666665 8999999998888777766554 346888899987632 0
Q ss_pred CCCceeEEEeccccc
Q 026688 129 ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~ 143 (235)
..+..|+++.+....
T Consensus 79 ~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 79 ENLAIDILVNNAGIT 93 (247)
T ss_dssp TTCCCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 124689999876543
No 486
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=85.58 E-value=5.5 Score=30.82 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=54.7
Q ss_pred CeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHH-hhhcCCCCCCCeeEE----ecccccCCCCCCceeE
Q 026688 63 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEF-VQQESNFPKENFLLV----RADISRLPFASSSIDA 135 (235)
Q Consensus 63 ~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~D~ 135 (235)
.+|+-+|+|. | .++..|++.+. .|+.++.++ .+..++. +..... ......+. ..|..+. ...+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~--~V~~~~r~~--~~~i~~~Gl~~~~~-~~g~~~~~~~~~~~~~~~~---~~~~Dl 74 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH--CVSVVSRSD--YETVKAKGIRIRSA-TLGDYTFRPAAVVRSAAEL---ETKPDC 74 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC--EEEEECSTT--HHHHHHHCEEEEET-TTCCEEECCSCEESCGGGC---SSCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC--eEEEEeCCh--HHHHHhCCcEEeec-CCCcEEEeeeeeECCHHHc---CCCCCE
Confidence 5799999996 3 45556666665 899999886 2444332 000000 01122211 1122211 236899
Q ss_pred EEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 136 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 136 i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
|+..---..+. .+++.+...++++..++.....
T Consensus 75 VilavK~~~~~---~~l~~l~~~l~~~t~Iv~~~nG 107 (320)
T 3i83_A 75 TLLCIKVVEGA---DRVGLLRDAVAPDTGIVLISNG 107 (320)
T ss_dssp EEECCCCCTTC---CHHHHHTTSCCTTCEEEEECSS
T ss_pred EEEecCCCChH---HHHHHHHhhcCCCCEEEEeCCC
Confidence 99754444333 4678888899888766654433
No 487
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=85.58 E-value=4.1 Score=30.62 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=51.9
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
++++|-.|++.| .++..|++.+. +|+.++.+++.++...+.+... ..++.++.+|+.+.. +
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRDA----GGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 567888887665 33445566665 8999999998888877766554 236778888987632 0
Q ss_pred CCCceeEEEeccccc
Q 026688 129 ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~ 143 (235)
.-+..|+++.+..+.
T Consensus 78 ~~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 78 TWGRIDVLVNNAGVM 92 (264)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 014689999876543
No 488
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.57 E-value=3.7 Score=32.19 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=54.6
Q ss_pred CeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc--CCCCC--CCeeEEecccccCCCCCCceeEE
Q 026688 63 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--SNFPK--ENFLLVRADISRLPFASSSIDAV 136 (235)
Q Consensus 63 ~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~--~~~~~~~~d~~~~~~~~~~~D~i 136 (235)
.+|.-+|+|. | .++..+++.+. .|+++|.+++.++..++..... +.... .++.....|..+. ...+|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~v 79 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDADVI 79 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCCEE
Confidence 5899999986 4 34455666654 8999999988777666542100 00000 0000111222111 1357988
Q ss_pred EecccccccCChHHHHHHHHHhccCCcEEEEE
Q 026688 137 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 168 (235)
Q Consensus 137 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~ 168 (235)
+..-.-.. ...+++.+...++++..++..
T Consensus 80 i~~v~~~~---~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 80 LIVVPAIH---HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EECSCGGG---HHHHHHHHGGGCCTTCEEEES
T ss_pred EEeCCchH---HHHHHHHHHHhCCCCCEEEEc
Confidence 86543332 246778888888887655543
No 489
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.46 E-value=4.9 Score=30.37 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=52.3
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
++++|-.|++.| .++..|++.+. +|+.++.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAA----GHDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 578888887665 34455666665 8999999998888777766543 346888899987632 0
Q ss_pred CCCceeEEEeccccc
Q 026688 129 ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~ 143 (235)
.-+..|+++.+....
T Consensus 98 ~~g~id~lv~nAg~~ 112 (279)
T 3sju_A 98 RFGPIGILVNSAGRN 112 (279)
T ss_dssp HHCSCCEEEECCCCC
T ss_pred HcCCCcEEEECCCCC
Confidence 014689999876543
No 490
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=85.19 E-value=4.2 Score=33.11 Aligned_cols=87 Identities=13% Similarity=0.065 Sum_probs=50.2
Q ss_pred CCCCeEEEecCCC-chHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEe
Q 026688 60 VLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 138 (235)
Q Consensus 60 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 138 (235)
..+++|+-+|+|. |......++.. .++|+++|+++.....+.. . ... ..++.+. -...|+|+.
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp~ra~~A~~----~------G~~--v~~Leea---l~~ADIVi~ 281 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDPICALQACM----D------GFR--LVKLNEV---IRQVDIVIT 281 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----T------TCE--ECCHHHH---TTTCSEEEE
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCChhhhHHHHH----c------CCE--eccHHHH---HhcCCEEEE
Confidence 3578999999997 55555444432 4599999999864444332 1 111 2333332 135688887
Q ss_pred cccccccCChHHHHHHHHHhccCCcEEEE
Q 026688 139 GAAIHCWSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 139 ~~~l~~~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
...-.++- -.+..+.+|||+.++-
T Consensus 282 atgt~~lI-----~~e~l~~MK~gailIN 305 (435)
T 3gvp_A 282 CTGNKNVV-----TREHLDRMKNSCIVCN 305 (435)
T ss_dssp CSSCSCSB-----CHHHHHHSCTTEEEEE
T ss_pred CCCCcccC-----CHHHHHhcCCCcEEEE
Confidence 42222221 1256677888876654
No 491
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=85.18 E-value=4.5 Score=24.38 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=44.2
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEEeccCCCcccchhHHHHHHhHhhcCCceeecCHHHHHHHHHHcCC
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 213 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 213 (235)
|..+-...+. .|.|--..++..+-+++|..|.+..-.. -+..++..++++.|+
T Consensus 10 ~~~lD~rGl~-CP~Pvl~~kkal~~l~~G~~l~V~~dd~--------------------------~a~~di~~~~~~~G~ 62 (82)
T 3lvj_C 10 DHTLDALGLR-CPEPVMMVRKTVRNMQPGETLLIIADDP--------------------------ATTRDIPGFCTFMEH 62 (82)
T ss_dssp SEEEECTTCC-TTHHHHHHHHHHHTSCTTCEEEEEECCT--------------------------THHHHHHHHHHHTTC
T ss_pred CEEEECCCCC-CCHHHHHHHHHHHhCCCCCEEEEEECCc--------------------------cHHHHHHHHHHHCCC
Confidence 4444333333 2334344566677788888777655432 245688999999999
Q ss_pred ceeEEEeeCcEEEEEEec
Q 026688 214 VDFKCTRNRGFVMFTATK 231 (235)
Q Consensus 214 ~~~~~~~~~~~~~~~~~k 231 (235)
+++.....+..+.+..+|
T Consensus 63 ~~~~~~~~~~~~~i~I~K 80 (82)
T 3lvj_C 63 ELVAKETDGLPYRYLIRK 80 (82)
T ss_dssp EEEEEECSSSSEEEEEEC
T ss_pred EEEEEEecCCEEEEEEEE
Confidence 988876555555555555
No 492
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=85.10 E-value=6.4 Score=32.61 Aligned_cols=96 Identities=18% Similarity=0.229 Sum_probs=58.6
Q ss_pred CeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc-------CCCC-------CCCeeEEecccccC
Q 026688 63 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------SNFP-------KENFLLVRADISRL 126 (235)
Q Consensus 63 ~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-------~~~~-------~~~~~~~~~d~~~~ 126 (235)
.+|--||+|. | ..+..+++.+. .|+++|.+++.++.+.+.+... +... ..++++ ..|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~- 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH--QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA- 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH-
Confidence 5788899986 3 45666777765 8999999999999887653221 1000 002222 233322
Q ss_pred CCCCCceeEEEecccccccCCh---HHHHHHHHHhccCCcEEEEEE
Q 026688 127 PFASSSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTT 169 (235)
Q Consensus 127 ~~~~~~~D~i~~~~~l~~~~~~---~~~l~~~~~~L~pgG~li~~~ 169 (235)
-...|+|+..- .++. ..+++++...++|+..++..+
T Consensus 82 ---~~~aDlVIeAV----pe~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 82 ---LAAADLVIEAA----SERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp ---GGGCSEEEECC----CCCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ---hcCCCEEEEcC----CCcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 24578888432 1222 467888999999887665433
No 493
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=84.92 E-value=0.79 Score=30.78 Aligned_cols=71 Identities=10% Similarity=0.171 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHhhhcCCCCCCCeeEEeccccc---CCCCCCceeEEEeccccc-c-cCChHHHHHHHHHhccCCcEEEE
Q 026688 94 SENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASSSIDAVHAGAAIH-C-WSSPSTGVAEISRVLRPGGVFVG 167 (235)
Q Consensus 94 s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~i~~~~~l~-~-~~~~~~~l~~~~~~L~pgG~li~ 167 (235)
.|+.++.++....... ...+...-.|=.. ..++...||.|+...--. . ..-+..++..+.+.|||||.|..
T Consensus 21 ~pe~le~~k~~~~~~~---~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASKK---VKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHTT---EEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhccc---cchhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4677777776654420 1122333233211 236688999999643322 2 22347899999999999999975
No 494
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=84.87 E-value=5.7 Score=30.09 Aligned_cols=75 Identities=21% Similarity=0.211 Sum_probs=51.7
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----CC----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 129 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 129 (235)
++++|-.|++.| ..+..|++.+. .|+.+|.+++.++...+.+... ..++.++..|+.+.. +.
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIVGA----GGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHTTT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 567888887665 33445566665 8999999998887777766543 346888899987632 00
Q ss_pred -CCceeEEEecccc
Q 026688 130 -SSSIDAVHAGAAI 142 (235)
Q Consensus 130 -~~~~D~i~~~~~l 142 (235)
-+..|+++.+...
T Consensus 102 ~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 102 KFGHLDIVVANAGI 115 (283)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 1478999987654
No 495
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=84.82 E-value=9 Score=29.89 Aligned_cols=98 Identities=16% Similarity=0.141 Sum_probs=54.5
Q ss_pred CCCCCCeEEEecCC-C-chH-HHHHHHcCCCceE-EEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCce
Q 026688 58 KPVLGGNIIDASCG-S-GLF-SRIFAKSGLFSLV-VALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 133 (235)
Q Consensus 58 ~~~~~~~vLdiG~G-~-G~~-~~~l~~~~~~~~v-~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 133 (235)
+.....+|.-|||| . |.. ...+.+..+..++ ..+|.+++..+...+++. +.-...|+.++- .....
T Consensus 14 ~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~---------~~~~~~~~~~ll-~~~~v 83 (340)
T 1zh8_A 14 KPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG---------NPAVFDSYEELL-ESGLV 83 (340)
T ss_dssp --CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS---------SCEEESCHHHHH-HSSCC
T ss_pred CCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhC---------CCcccCCHHHHh-cCCCC
Confidence 34446789999999 3 543 3344433255565 578999877666554431 112335555431 23468
Q ss_pred eEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 134 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 134 D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
|+|+....- ..-...+..+|+.|-.+++.-+.
T Consensus 84 D~V~i~tp~------~~H~~~~~~al~aGkhVl~EKPl 115 (340)
T 1zh8_A 84 DAVDLTLPV------ELNLPFIEKALRKGVHVICEKPI 115 (340)
T ss_dssp SEEEECCCG------GGHHHHHHHHHHTTCEEEEESSS
T ss_pred CEEEEeCCc------hHHHHHHHHHHHCCCcEEEeCCC
Confidence 999964321 12244556677777677765443
No 496
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=84.82 E-value=9 Score=29.91 Aligned_cols=93 Identities=15% Similarity=0.018 Sum_probs=52.6
Q ss_pred CeEEEecCCC-chHHHHHHHcCCCceEE-EEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCCCCCCceeEEEecc
Q 026688 63 GNIIDASCGS-GLFSRIFAKSGLFSLVV-ALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 140 (235)
Q Consensus 63 ~~vLdiG~G~-G~~~~~l~~~~~~~~v~-~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 140 (235)
.+|.-||||. |..........+..+++ .+|.+++..+.+.+... +.....|..++- .....|+|+...
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~---------~~~~~~~~~~ll-~~~~~D~V~i~t 72 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLG---------VEKAYKDPHELI-EDPNVDAVLVCS 72 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHT---------CSEEESSHHHHH-HCTTCCEEEECS
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhC---------CCceeCCHHHHh-cCCCCCEEEEcC
Confidence 4788899985 44333333334556776 57999877665544331 112334554431 234689998543
Q ss_pred cccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 141 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 141 ~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
.- ......+..+|+.|-.+++..+.
T Consensus 73 p~------~~h~~~~~~al~~gk~v~~EKP~ 97 (344)
T 3ezy_A 73 ST------NTHSELVIACAKAKKHVFCEKPL 97 (344)
T ss_dssp CG------GGHHHHHHHHHHTTCEEEEESCS
T ss_pred CC------cchHHHHHHHHhcCCeEEEECCC
Confidence 21 22344556677777777766553
No 497
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.51 E-value=6.8 Score=29.23 Aligned_cols=78 Identities=10% Similarity=0.041 Sum_probs=52.8
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
++++|-.|++.| .++..+++.+. +|+.++.+++.++.+.+.+..... ..++.++..|+.+.. +
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQRFP--GARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHST--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcC--CceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 577888887765 34455666665 899999999888877776654211 335888889987632 0
Q ss_pred CCCceeEEEeccccc
Q 026688 129 ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~ 143 (235)
.-+..|+++.+....
T Consensus 84 ~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 84 TLGCASILVNNAGQG 98 (265)
T ss_dssp HHCSCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 014689999876553
No 498
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=84.01 E-value=4.6 Score=32.29 Aligned_cols=110 Identities=18% Similarity=0.131 Sum_probs=65.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCCchHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC
Q 026688 48 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 127 (235)
Q Consensus 48 ~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~ 127 (235)
...+.+++.+... ..+||.++-+.|.++..+... ..++.+.-|-..... +..++. .... .+ ...
T Consensus 33 ~~~~~l~~~~~~~-~~~~l~~n~~~g~~~~~~~~~---~~~~~~~~~~~~~~~----l~~~~~----~~~~--~~--~~~ 96 (381)
T 3dmg_A 33 PVHDLLQKTVEPF-GERALDLNPGVGWGSLPLEGR---MAVERLETSRAAFRC----LTASGL----QARL--AL--PWE 96 (381)
T ss_dssp HHHHHHHTTCCCC-SSEEEESSCTTSTTTGGGBTT---BEEEEEECBHHHHHH----HHHTTC----CCEE--CC--GGG
T ss_pred hHHHHHHHHHHHh-CCcEEEecCCCCccccccCCC---CceEEEeCcHHHHHH----HHHcCC----Cccc--cC--Ccc
Confidence 4556666766654 479999999999887766532 367776555433322 333332 1111 11 111
Q ss_pred CCCCceeEEEeccccc-ccCChHHHHHHHHHhccCCcEEEEEEeccC
Q 026688 128 FASSSIDAVHAGAAIH-CWSSPSTGVAEISRVLRPGGVFVGTTYIVD 173 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~-~~~~~~~~l~~~~~~L~pgG~li~~~~~~~ 173 (235)
.+...||+|+....=. .....+..|..+.+.|+|||.|++......
T Consensus 97 ~~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~ 143 (381)
T 3dmg_A 97 AAAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNK 143 (381)
T ss_dssp SCTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred CCcCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHH
Confidence 2346899998422210 000124678888999999999998876643
No 499
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=83.95 E-value=7 Score=29.29 Aligned_cols=76 Identities=17% Similarity=0.136 Sum_probs=49.7
Q ss_pred CCeEEEecCCCc---hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhcCCCCCCCeeEEecccccCC-----C-----
Q 026688 62 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 128 (235)
Q Consensus 62 ~~~vLdiG~G~G---~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 128 (235)
+++||-.|++.| .++..+++.+. +|++++.++..++...+.+... ..++.++..|+.+.. +
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~ 104 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGL----GAKVHTFVVDCSNREDIYSSAKKVKA 104 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHhc----CCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 567888776554 23334555554 8999999988777666655443 236888889987632 0
Q ss_pred CCCceeEEEeccccc
Q 026688 129 ASSSIDAVHAGAAIH 143 (235)
Q Consensus 129 ~~~~~D~i~~~~~l~ 143 (235)
.-+.+|+++.+....
T Consensus 105 ~~g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 105 EIGDVSILVNNAGVV 119 (272)
T ss_dssp HTCCCSEEEECCCCC
T ss_pred HCCCCcEEEECCCcC
Confidence 013689999876543
No 500
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.90 E-value=19 Score=31.64 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=60.7
Q ss_pred CCeEEEecCCC-c-hHHHHHHHcCCCceEEEEeCCHHHHHHHHHHhhhc-----------CCC-CCCCeeEEecccccCC
Q 026688 62 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----------SNF-PKENFLLVRADISRLP 127 (235)
Q Consensus 62 ~~~vLdiG~G~-G-~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-----------~~~-~~~~~~~~~~d~~~~~ 127 (235)
-++|--||+|+ | ..+..++..+. .|+..|++++.++.+++.+... ... ...++. ...|...+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l- 391 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR-FSSSTKEL- 391 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEE-EESCGGGG-
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCC--chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhc-ccCcHHHH-
Confidence 36899999997 3 44455555555 9999999999988887655321 000 001111 22222221
Q ss_pred CCCCceeEEEecccccccCChHHHHHHHHHhccCCcEEEEEEec
Q 026688 128 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 171 (235)
Q Consensus 128 ~~~~~~D~i~~~~~l~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 171 (235)
...|+|+=. +++.+.-..++++++-.+++|+..|.-.+.+
T Consensus 392 ---~~aDlVIEA-V~E~l~iK~~vf~~le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 392 ---STVDLVVEA-VFEDMNLKKKVFAELSALCKPGAFLCTNTSA 431 (742)
T ss_dssp ---GSCSEEEEC-CCSCHHHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred ---hhCCEEEEe-ccccHHHHHHHHHHHhhcCCCCceEEecCCc
Confidence 346877711 2222222358899999999998877654443
Done!