Query 026689
Match_columns 235
No_of_seqs 206 out of 1808
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 19:41:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zc6_A Probable N-acetylglucos 100.0 2.2E-31 7.5E-36 234.6 27.1 192 22-230 11-205 (305)
2 2ch5_A NAGK protein; transfera 100.0 4E-32 1.4E-36 242.4 22.6 199 20-230 4-209 (347)
3 1zbs_A Hypothetical protein PG 100.0 9.3E-31 3.2E-35 229.4 21.3 189 23-231 1-189 (291)
4 1zxo_A Conserved hypothetical 100.0 4.4E-31 1.5E-35 231.5 12.7 186 23-230 1-186 (291)
5 2e2o_A Hexokinase; acetate and 100.0 5.6E-29 1.9E-33 218.1 23.2 190 20-230 1-190 (299)
6 2qm1_A Glucokinase; alpha-beta 99.9 8.5E-24 2.9E-28 186.7 18.8 149 19-181 3-174 (326)
7 3vgl_A Glucokinase; ROK family 99.9 1.9E-21 6.4E-26 172.4 15.3 153 22-195 2-192 (321)
8 3r8e_A Hypothetical sugar kina 99.9 6.9E-22 2.4E-26 175.2 11.4 158 18-194 15-204 (321)
9 1z05_A Transcriptional regulat 99.9 2.8E-21 9.6E-26 177.7 15.8 145 22-181 108-274 (429)
10 2yhw_A Bifunctional UDP-N-acet 99.9 1.8E-21 6.2E-26 173.6 13.0 144 22-181 30-197 (343)
11 2ap1_A Putative regulator prot 99.9 2.8E-20 9.5E-25 164.8 18.1 142 22-182 24-187 (327)
12 1z6r_A MLC protein; transcript 99.8 4E-21 1.4E-25 175.2 12.2 146 21-181 84-252 (406)
13 4db3_A Glcnac kinase, N-acetyl 99.8 9.8E-21 3.4E-25 168.4 14.2 139 23-180 25-185 (327)
14 2hoe_A N-acetylglucosamine kin 99.8 6.9E-21 2.4E-25 172.5 12.8 146 22-181 87-252 (380)
15 2aa4_A Mannac kinase, putative 99.8 7.4E-21 2.5E-25 165.5 11.3 138 23-182 2-162 (289)
16 2gup_A ROK family protein; sug 99.8 5.1E-20 1.7E-24 160.5 15.7 133 23-181 5-158 (292)
17 4htl_A Beta-glucoside kinase; 99.8 2.1E-20 7.4E-25 164.0 13.4 135 23-180 5-162 (297)
18 3htv_A D-allose kinase, alloki 99.8 2.1E-20 7.2E-25 165.2 12.9 141 22-180 7-171 (310)
19 3vov_A Glucokinase, hexokinase 99.8 1.6E-20 5.5E-25 165.3 11.8 138 23-179 2-162 (302)
20 3epq_A Putative fructokinase; 99.8 1.2E-19 4E-24 160.0 13.1 132 22-179 3-159 (302)
21 1woq_A Inorganic polyphosphate 99.8 1.2E-19 4.1E-24 156.8 12.3 143 23-180 13-175 (267)
22 3mcp_A Glucokinase; structural 99.8 2.3E-18 7.7E-23 155.8 14.3 151 21-193 8-208 (366)
23 3lm2_A Putative kinase; struct 99.8 2.3E-18 7.9E-23 146.2 10.8 137 22-191 6-162 (226)
24 1sz2_A Glucokinase, glucose ki 99.7 3.3E-17 1.1E-21 145.6 13.5 134 21-178 13-173 (332)
25 2q2r_A Glucokinase 1, putative 99.7 4.1E-18 1.4E-22 153.8 7.7 145 22-182 29-222 (373)
26 1saz_A Probable butyrate kinas 99.6 2.2E-16 7.5E-21 143.3 8.6 144 22-180 2-213 (381)
27 1cza_N Hexokinase type I; stru 99.6 3.9E-15 1.3E-19 148.5 15.9 163 22-196 78-311 (917)
28 2yhx_A Hexokinase B; transfera 99.6 4.7E-15 1.6E-19 137.6 14.5 165 22-198 61-295 (457)
29 1bdg_A Hexokinase; phosphotran 99.6 1.7E-14 5.9E-19 133.6 17.7 162 22-197 68-301 (451)
30 1cza_N Hexokinase type I; stru 99.4 4.6E-12 1.6E-16 126.4 13.5 165 22-198 526-761 (917)
31 3o8m_A Hexokinase; rnaseh-like 99.2 3.1E-10 1.1E-14 105.7 13.7 132 22-162 80-240 (485)
32 4e1j_A Glycerol kinase; struct 99.0 1.1E-09 3.7E-14 102.9 11.5 80 16-104 20-105 (520)
33 2zf5_O Glycerol kinase; hypert 98.9 4.3E-09 1.5E-13 98.2 10.9 76 20-104 1-82 (497)
34 3hm8_A Hexokinase-3; glucose, 98.9 7.1E-08 2.4E-12 88.8 18.8 145 22-177 59-241 (445)
35 3g25_A Glycerol kinase; IDP007 98.9 4.5E-09 1.6E-13 98.2 10.8 76 20-104 4-85 (501)
36 3ezw_A Glycerol kinase; glycer 98.9 4.4E-09 1.5E-13 98.8 10.8 74 21-103 3-82 (526)
37 3ifr_A Carbohydrate kinase, FG 98.9 3.4E-09 1.2E-13 99.3 9.4 76 20-104 5-86 (508)
38 2p3r_A Glycerol kinase; glycer 98.9 1.1E-08 3.7E-13 95.9 11.0 75 21-104 2-82 (510)
39 3hz6_A Xylulokinase; xylulose, 98.8 1.1E-08 3.6E-13 96.0 10.6 75 20-104 3-83 (511)
40 2w40_A Glycerol kinase, putati 98.8 8.1E-09 2.8E-13 96.5 9.8 76 20-104 2-85 (503)
41 3h3n_X Glycerol kinase; ATP-bi 98.8 1.9E-08 6.3E-13 94.2 10.9 75 21-104 4-84 (506)
42 2dpn_A Glycerol kinase; thermu 98.8 1.7E-08 5.9E-13 94.1 10.3 74 22-104 2-81 (495)
43 3l0q_A Xylulose kinase; xlylul 98.7 3E-08 1E-12 93.7 9.8 72 21-101 4-81 (554)
44 3f9m_A Glucokinase; hexokinase 98.7 5.7E-07 2E-11 83.3 18.0 167 22-198 77-314 (470)
45 2d4w_A Glycerol kinase; alpha 98.7 6.1E-08 2.1E-12 90.6 10.8 74 22-104 2-81 (504)
46 3ll3_A Gluconate kinase; xylul 98.7 6.8E-08 2.3E-12 90.3 10.6 73 21-105 3-81 (504)
47 3jvp_A Ribulokinase; PSI-II, N 98.6 6.8E-08 2.3E-12 91.7 9.1 76 21-104 4-96 (572)
48 3h6e_A Carbohydrate kinase, FG 98.6 7.9E-08 2.7E-12 89.6 7.8 70 20-104 4-78 (482)
49 2itm_A Xylulose kinase, xylulo 98.5 2.9E-07 9.7E-12 85.5 9.7 71 23-104 1-77 (484)
50 4bc3_A Xylulose kinase; transf 98.5 2.6E-07 9E-12 87.0 8.3 107 18-138 7-146 (538)
51 3i8b_A Xylulose kinase; strain 98.5 5.9E-07 2E-11 84.3 9.8 70 21-104 4-74 (515)
52 3djc_A Type III pantothenate k 98.4 1.2E-05 4.1E-10 69.3 15.4 124 23-167 3-146 (266)
53 3bex_A Type III pantothenate k 98.3 7.9E-06 2.7E-10 69.8 12.8 126 20-168 1-143 (249)
54 2uyt_A Rhamnulokinase; rhamnos 98.3 7.4E-07 2.5E-11 82.7 5.4 68 22-102 4-81 (489)
55 4ehu_A Activator of 2-hydroxyi 98.2 8.6E-05 3E-09 63.3 16.7 114 23-169 2-117 (276)
56 3h1q_A Ethanolamine utilizatio 98.1 0.00032 1.1E-08 59.4 17.3 133 22-170 28-163 (272)
57 1hux_A Activator of (R)-2-hydr 97.8 8.7E-05 3E-09 63.7 9.3 115 22-169 3-119 (270)
58 2h3g_X Biosynthetic protein; p 97.8 0.00093 3.2E-08 57.5 15.6 123 24-167 2-144 (268)
59 2ivn_A O-sialoglycoprotein end 96.7 0.071 2.4E-06 46.7 15.7 136 23-172 2-147 (330)
60 2f9w_A Pantothenate kinase; CO 96.6 0.038 1.3E-06 47.5 12.8 137 20-194 21-178 (271)
61 4a2a_A Cell division protein F 96.6 0.0079 2.7E-07 54.7 8.9 75 22-105 8-86 (419)
62 1nu0_A Hypothetical protein YQ 96.2 0.012 4.2E-07 45.5 6.8 91 20-135 1-98 (138)
63 1t6c_A Exopolyphosphatase; alp 96.0 0.098 3.3E-06 45.7 12.5 138 18-169 9-161 (315)
64 3zyy_X Iron-sulfur cluster bin 95.8 0.04 1.4E-06 52.7 9.6 85 7-100 192-295 (631)
65 3mdq_A Exopolyphosphatase; str 95.7 0.15 5E-06 44.5 12.3 137 20-169 2-154 (315)
66 2fxu_A Alpha-actin-1, actin, a 95.7 0.3 1E-05 43.1 14.6 91 74-168 79-170 (375)
67 3eno_A Putative O-sialoglycopr 94.9 1.8 6E-05 37.9 18.0 136 23-172 7-153 (334)
68 3cet_A Conserved archaeal prot 94.7 0.068 2.3E-06 47.2 7.1 86 24-134 2-94 (334)
69 1iv0_A Hypothetical protein; r 94.6 0.74 2.5E-05 33.2 11.3 81 24-132 3-92 (98)
70 3bzc_A TEX; helix-turn-helix, 94.6 0.47 1.6E-05 46.4 13.2 97 22-139 329-427 (785)
71 1u6z_A Exopolyphosphatase; alp 94.5 0.71 2.4E-05 42.9 13.7 135 23-168 12-159 (513)
72 2ych_A Competence protein PILM 94.3 1.8 6.3E-05 37.6 15.6 68 22-104 13-85 (377)
73 1jce_A ROD shape-determining p 94.2 2.4 8.1E-05 36.5 17.1 72 96-169 96-170 (344)
74 4gni_A Putative heat shock pro 94.2 0.4 1.4E-05 42.6 11.2 88 70-162 127-221 (409)
75 1vhx_A Putative holliday junct 94.1 0.17 5.8E-06 39.5 7.5 94 23-139 4-104 (150)
76 1k8k_A ARP3, actin-like protei 94.1 0.72 2.5E-05 41.1 12.7 92 74-168 86-185 (418)
77 3r6m_A YEAZ, resuscitation pro 93.8 1.5 5.1E-05 36.1 13.1 96 23-139 3-101 (213)
78 3en9_A Glycoprotease, O-sialog 93.5 3.1 0.00011 38.5 16.2 133 23-170 7-150 (540)
79 1nbw_A Glycerol dehydratase re 93.4 0.15 5.2E-06 48.0 6.9 63 21-91 1-63 (607)
80 3qfu_A 78 kDa glucose-regulate 93.2 0.64 2.2E-05 40.7 10.6 89 69-162 129-222 (394)
81 3cer_A Possible exopolyphospha 93.1 0.66 2.3E-05 40.9 10.4 138 16-165 11-165 (343)
82 3psf_A Transcription elongatio 93.1 0.59 2E-05 47.1 11.0 99 22-140 519-629 (1030)
83 3hi0_A Putative exopolyphospha 92.6 1.5 5E-05 40.7 12.4 134 22-168 15-162 (508)
84 2a6a_A Hypothetical protein TM 92.6 3.8 0.00013 33.6 13.8 97 22-139 12-111 (218)
85 3psi_A Transcription elongatio 92.4 0.78 2.7E-05 47.0 11.1 99 22-140 516-626 (1219)
86 3t69_A Putative 2-dehydro-3-de 91.8 0.24 8.2E-06 43.6 5.7 33 20-61 5-37 (330)
87 2d0o_A DIOL dehydratase-reacti 91.6 0.5 1.7E-05 44.5 7.9 70 21-97 1-70 (610)
88 2v7y_A Chaperone protein DNAK; 91.1 5.2 0.00018 36.7 14.3 90 69-163 85-178 (509)
89 2gel_A Putative GRAM negative 90.9 1.4 4.6E-05 36.5 9.2 96 23-139 2-100 (231)
90 1dkg_D Molecular chaperone DNA 89.7 2 6.7E-05 37.5 9.8 90 69-163 111-205 (383)
91 3qb0_A Actin-related protein 4 89.5 8.9 0.0003 35.4 14.4 92 74-168 92-184 (498)
92 3i33_A Heat shock-related 70 k 89.5 7.5 0.00026 34.0 13.5 90 69-163 134-231 (404)
93 4b9q_A Chaperone protein DNAK; 88.8 11 0.00038 35.4 14.9 89 69-162 111-204 (605)
94 3aap_A Ectonucleoside triphosp 86.3 7.5 0.00026 34.1 11.3 128 22-162 3-156 (353)
95 3d2f_A Heat shock protein homo 85.6 26 0.00088 33.5 17.0 95 69-168 114-221 (675)
96 1hjr_A Holliday junction resol 84.9 2.8 9.7E-05 32.7 7.0 55 23-89 2-59 (158)
97 3nuw_A 2-OXO-3-deoxygalactonat 84.6 2.2 7.6E-05 36.8 6.8 32 20-61 4-35 (295)
98 4ep4_A Crossover junction endo 83.7 6.4 0.00022 31.0 8.7 56 23-89 2-63 (166)
99 2kho_A Heat shock protein 70; 81.3 16 0.00054 34.3 11.9 90 69-163 111-205 (605)
100 4ijn_A Acetate kinase, acetoki 80.3 12 0.00043 33.5 10.2 69 19-100 21-92 (398)
101 2ews_A Pantothenate kinase; PA 79.9 1.6 5.3E-05 37.6 4.1 25 23-57 21-45 (287)
102 4fo0_A Actin-related protein 8 79.0 26 0.0009 32.3 12.6 96 70-168 170-268 (593)
103 1k8k_B ARP2, actin-like protei 78.8 0.82 2.8E-05 40.6 2.1 92 74-169 82-175 (394)
104 3dwl_A Actin-related protein 3 74.5 35 0.0012 30.5 11.7 93 74-168 102-201 (427)
105 3sk3_A Acetate kinase, acetoki 74.2 4.3 0.00015 36.7 5.4 35 16-58 12-47 (415)
106 4am6_A Actin-like protein ARP8 74.1 36 0.0012 32.5 12.0 97 69-168 191-292 (655)
107 2e1z_A Propionate kinase; TDCD 73.7 19 0.00064 32.5 9.5 37 16-60 12-48 (415)
108 3zx3_A Ectonucleoside triphosp 72.3 9.6 0.00033 34.8 7.4 141 21-164 33-199 (452)
109 1xho_A Chorismate mutase; sout 66.5 11 0.00036 29.1 5.3 37 68-104 44-80 (148)
110 3cj1_A Ectonucleoside triphosp 65.4 10 0.00035 34.6 6.0 138 21-165 33-209 (456)
111 1dbf_A Protein (chorismate mut 63.9 13 0.00043 28.0 5.2 37 68-104 15-51 (127)
112 2ych_A Competence protein PILM 60.4 51 0.0017 28.2 9.5 20 22-41 191-210 (377)
113 1ufy_A Chorismate mutase; shik 59.8 16 0.00055 27.3 5.1 38 68-105 14-52 (122)
114 3r9p_A ACKA; ssgcid, seattle s 57.4 59 0.002 29.0 9.3 66 23-100 13-83 (391)
115 1yuw_A Heat shock cognate 71 k 46.3 10 0.00034 35.2 2.6 94 70-168 116-217 (554)
116 2zgy_A Plasmid segregation pro 43.5 17 0.00057 30.9 3.4 41 127-167 142-185 (320)
117 3mdq_A Exopolyphosphatase; str 42.2 66 0.0022 27.4 7.1 29 23-61 132-160 (315)
118 4apw_A ALP12; actin-like prote 38.1 18 0.00061 31.1 2.7 23 16-38 1-23 (329)
119 3qbx_A Anhydro-N-acetylmuramic 35.1 2.2E+02 0.0075 25.1 9.4 76 22-106 2-97 (371)
120 3qfu_A 78 kDa glucose-regulate 32.0 1.2E+02 0.004 25.9 7.1 20 22-41 206-225 (394)
121 4gni_A Putative heat shock pro 31.6 85 0.0029 27.2 6.2 49 72-124 322-370 (409)
122 3i33_A Heat shock-related 70 k 31.4 1.3E+02 0.0043 25.9 7.2 21 21-41 213-233 (404)
123 3khy_A Propionate kinase; csgi 29.1 71 0.0024 28.4 5.1 29 23-59 3-31 (384)
124 3cqy_A Anhydro-N-acetylmuramic 28.9 2.3E+02 0.0077 25.0 8.3 76 22-105 5-100 (370)
125 4h0p_A Acetate kinase; askha ( 28.2 59 0.002 29.5 4.5 20 22-41 6-25 (438)
126 2fsj_A Hypothetical protein TA 28.2 50 0.0017 28.3 4.0 20 22-41 190-209 (346)
127 1yuw_A Heat shock cognate 71 k 27.0 3.6E+02 0.012 24.5 11.1 20 22-41 4-23 (554)
128 2iir_A Acetate kinase; transfe 26.6 69 0.0024 28.7 4.6 19 23-41 2-20 (403)
129 3brc_A Conserved protein of un 25.5 2.3E+02 0.0077 21.7 7.6 49 30-90 106-154 (156)
130 1g99_A Acetate kinase; alpha/b 23.5 88 0.003 28.0 4.7 19 23-41 2-20 (408)
131 1dkg_D Molecular chaperone DNA 22.5 71 0.0024 27.3 3.9 57 73-135 312-368 (383)
132 3h1q_A Ethanolamine utilizatio 21.8 1.6E+02 0.0054 23.6 5.7 18 24-41 141-158 (272)
133 1jce_A ROD shape-determining p 21.2 2.6E+02 0.009 23.2 7.2 20 22-41 147-166 (344)
134 3dpi_A NAD+ synthetase; ssgcid 21.0 1.2E+02 0.004 25.7 4.8 34 68-106 24-57 (285)
135 4a2a_A Cell division protein F 20.8 2.3E+02 0.0078 25.0 7.0 41 23-79 207-247 (419)
No 1
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=2.2e-31 Score=234.58 Aligned_cols=192 Identities=24% Similarity=0.299 Sum_probs=167.3
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc--eeeE
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV--RAVC 99 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i--~~ig 99 (235)
+|+||||+|+|++|++++|. +|+++.+.+.++.++. ++++++++.+.+++++++++.+.++++| .+|+
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~---------~G~il~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ig 80 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS---------DGTPLAMAEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIG 80 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET---------TCCEEEEEEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEEEEcCccceEEEEEcC---------CCCEEEEEeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCChhhhccceEE
Confidence 49999999999999999999 8999998877555553 6899999999999999999888776676 7899
Q ss_pred EeccCCCCccHHHHHHHHHHhhCC-CCceEEEeCcHHHHHHhhcCCCCCEEEEEeCCCceeEEEecCCcEEEeCCCCccc
Q 026689 100 LAVSGVNHPTDQQRILNWLRDIFP-GNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPIL 178 (235)
Q Consensus 100 igi~G~~~~~~~~~l~~~l~~~~~-~~~~v~v~NDa~~a~~~~~~g~~~gi~li~GTGs~~~g~~~~G~~~~~Gg~G~ll 178 (235)
+|+||+.++..+.. |++.|+ . .||.|+||++++++++. +.++++++++|||+++++++.||++.++|||||++
T Consensus 81 ig~pG~v~~~~~~~----l~~~~~~~-~pv~v~NDa~aaa~ge~-~~~~~v~v~~GTGigg~~i~~~G~~~~aGe~Gh~~ 154 (305)
T 1zc6_A 81 LGLSGVHNRQWAGE----FESQAPGF-ARLSLATDGYTTLLGAH-GGQPGIIVALGTGSIGEALYPDGSHREAGGWGYPS 154 (305)
T ss_dssp EEESCCCTTSHHHH----HHHTCCCC-SEEEEECHHHHHHHHHT-TTSSEEEEEESSSEEEEEECTTSCEEEESCCCTTT
T ss_pred EEecCCCchHHHHH----HHHhCCCC-ceEEEECCHHHHHHhhc-CCCCeEEEEecCCeEEEEEeCCCcEEEecCccccc
Confidence 99999988776543 666674 3 79999999999999875 45789999999999777776699999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHHHh
Q 026689 179 GDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGYMIY 230 (235)
Q Consensus 179 gd~gSg~~ig~~al~~~~~~~dg~~~~t~l~~~~~~~~~~~~~~~l~~~~y~ 230 (235)
+|+||++|+|++++...++..|++.+.+.+...+.+.++ .+.++++.++|.
T Consensus 155 ~d~g~~~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~~~ 205 (305)
T 1zc6_A 155 GDEASGAWLGQRAAQLTQMALDGRHSHSPLTRAVLDFVG-GDWQAMMAWNGR 205 (305)
T ss_dssp SCTTSHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHT-SSHHHHHHHHHT
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHC-cCHHHHHHHHhc
Confidence 999999999999999999999998888899999999998 578888887764
No 2
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=100.00 E-value=4e-32 Score=242.41 Aligned_cols=199 Identities=25% Similarity=0.363 Sum_probs=172.1
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcc-cceee
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRS-AVRAV 98 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~-~i~~i 98 (235)
|++|+||||+|+|+++++++|. +|+++.+.+.++.++.+.+++++++.+.+.+++++++.+.++. +|.+|
T Consensus 4 M~~~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gi 74 (347)
T 2ch5_A 4 MAAIYGGVEGGGTRSEVLLVSE---------DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSL 74 (347)
T ss_dssp SSCEEEEEEECTTCEEEEEEET---------TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEE
T ss_pred cceEEEEEEcCccceEEEEEeC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEE
Confidence 3349999999999999999999 8999998887555543358899999999999999988877666 79999
Q ss_pred EEeccCCCCccHHHHHHHHHHhhCC--CCceEEEeCcHHHHHHhhcCCCCCEEEEEeCCCceeEEEecCCcEEEeCCCCc
Q 026689 99 CLAVSGVNHPTDQQRILNWLRDIFP--GNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGP 176 (235)
Q Consensus 99 gigi~G~~~~~~~~~l~~~l~~~~~--~~~~v~v~NDa~~a~~~~~~g~~~gi~li~GTGs~~~g~~~~G~~~~~Gg~G~ 176 (235)
++|+||+.++..+.++.+.|++.|+ . .||.|+||+++++++. .+ ++++++++|||++++.+..+|+.++||+|||
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~-~pv~v~NDa~aaa~a~-~~-~~~v~v~~GTGig~~~v~~~G~~c~cG~~G~ 151 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLS-ESYLITTDAAGSIATA-TP-DGGVVLISGTGSNCRLINPDGSESGCGGWGH 151 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSB-SCEEEEEHHHHHHHHH-CS-SCEEEEEESSSEEEEEECTTSCEEEEECCCT
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCC-ceEEEECcHHHHHHhh-CC-CCcEEEEEcCCceeEEEcCCCCEEecCCcCc
Confidence 9999999988778899999999986 3 6999999999999884 44 6899999999998776767999999999999
Q ss_pred cccccchHHHHHHHHHHHHHHHhcCCCC----CchhHHHHHHHcCCCChhhHHHHHHh
Q 026689 177 ILGDWGSGYGIAAQALTAVIRAYDGRGP----DTMLTSNILSTLELSSPDELIGYMIY 230 (235)
Q Consensus 177 llgd~gSg~~ig~~al~~~~~~~dg~~~----~t~l~~~~~~~~~~~~~~~l~~~~y~ 230 (235)
+.+|+||++|+++++++..++.+|++.+ .++|.+.+.+++++++..+++.++|.
T Consensus 152 l~~de~s~~~i~~~~~~~~~~~~dg~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~ 209 (347)
T 2ch5_A 152 MMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYR 209 (347)
T ss_dssp TTCCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTT
T ss_pred ccCCCccHHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHhCCCCHHHHHHHHhc
Confidence 9999999999999999999999999876 36899999998888777776665553
No 3
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=99.97 E-value=9.3e-31 Score=229.43 Aligned_cols=189 Identities=24% Similarity=0.267 Sum_probs=158.2
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
++||||+||||||++++|. |+++.+.+.+++++...+++++++++.+++++++ +.+..++.+|++|+
T Consensus 1 ~~lgiDiGGT~~~~~l~d~----------g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig~ 67 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAKE----------GKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAI---GQKASSIRAVYFYG 67 (291)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEEE
T ss_pred CEEEEEeCccceEEEEEeC----------CeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHh---CCCcccccEEEEEC
Confidence 3799999999999999982 6889888776666543588999999999888764 22344688999999
Q ss_pred cCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEEEeCCCceeEEEecCCcEEEeCCCCccccccc
Q 026689 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWG 182 (235)
Q Consensus 103 ~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~li~GTGs~~~g~~~~G~~~~~Gg~G~llgd~g 182 (235)
||++ +....++++.|++.|+...||.|+||+++|++++. +.++++++++|||+++++++.||++.++|||||+++|+|
T Consensus 68 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~-g~~~~v~v~~GTGigg~~i~~~G~~~~aGe~G~~~~d~g 145 (291)
T 1zbs_A 68 AGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC-GDSEGIACILGTGSNSCLFDGREIKANVSPLGYILGDEG 145 (291)
T ss_dssp TTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT-TTSCEEEEEESSSEEEEEECSSSEEEECCCCHHHHCCTT
T ss_pred CCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc-CCCCcEEEEecCChheEEECCCCcEEEeCCCccccCCCc
Confidence 9998 65567899999999971139999999999999875 667999999999998778888999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHHHhh
Q 026689 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGYMIYK 231 (235)
Q Consensus 183 Sg~~ig~~al~~~~~~~dg~~~~t~l~~~~~~~~~~~~~~~l~~~~y~~ 231 (235)
|++|+|+++++..++. +. .+.|.+.+.+.++.+ .+++++++|..
T Consensus 146 ~~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~~-~~~l~~~~~~~ 189 (291)
T 1zbs_A 146 SGAVLGRLFIGSLLKG---QM-PEGLCEAFLQEYGLT-SADIIESVYRK 189 (291)
T ss_dssp SHHHHHHHHHHHHHTT---CS-CTTHHHHHHHHTTCC-HHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCcC-HHHHHHHHHcC
Confidence 9999999999876655 33 789999999999864 77888888753
No 4
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=99.97 E-value=4.4e-31 Score=231.50 Aligned_cols=186 Identities=22% Similarity=0.252 Sum_probs=143.3
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
|+||||+||||||++++| . |+++.+.+.+++|+...++++++++|.+++++++. ..++.+|++|+
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~---------g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig~ 65 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-N---------GAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFYG 65 (291)
T ss_dssp ---CEECCTTCEEEEEEC-S---------SSEEEEEEECCCCTTTSCSTTTTTTTTC------------------CEEEC
T ss_pred CEEEEEeccccEEEEEEc-C---------CeEEEEEECCCCCcccCCHHHHHHHHHHHHHHhcC-----cccccEEEEEc
Confidence 479999999999999998 2 68998888766665434677888888888877653 23578999999
Q ss_pred cCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEEEeCCCceeEEEecCCcEEEeCCCCccccccc
Q 026689 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWG 182 (235)
Q Consensus 103 ~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~li~GTGs~~~g~~~~G~~~~~Gg~G~llgd~g 182 (235)
||++ ++...++++.|++.|+...||.|+||+++|++++. +.++++++++|||+++++++.||++.++|||||+++|+|
T Consensus 66 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~-g~~~~v~v~~GTGi~g~gi~~~G~~~~aGe~Gh~~~d~g 143 (291)
T 1zxo_A 66 AGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC-GQKAGIACILGTGSNSCFYNGKEIVSNISPLGFILGDEG 143 (291)
T ss_dssp TTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT-TTSCBEEEEESSSEEEEEECSSSEEEECCCCCTTTSCCS
T ss_pred CCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc-CCCCcEEEEeCCChheEEECCCCcEEEeCCCccccCCCc
Confidence 9997 55556899999999971039999999999999886 667999999999997788989999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHHHh
Q 026689 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGYMIY 230 (235)
Q Consensus 183 Sg~~ig~~al~~~~~~~dg~~~~t~l~~~~~~~~~~~~~~~l~~~~y~ 230 (235)
|++|+|+++++..++. +. .+.|.+.+.+.++. +.+++++++|.
T Consensus 144 ~~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~-~~~~l~~~~~~ 186 (291)
T 1zxo_A 144 SGAVLGKLLVGDILKN---QL-PATLKEEFLKQFDL-TPPEIIDRVYR 186 (291)
T ss_dssp SHHHHHHHHHHHGGGT---CS-CSHHHHHHHHHHTC-CHHHHGGGTTT
T ss_pred hHHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCC-CHHHHHHHHhc
Confidence 9999999998875544 44 78999999999886 46777776654
No 5
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=99.97 E-value=5.6e-29 Score=218.11 Aligned_cols=190 Identities=26% Similarity=0.385 Sum_probs=165.3
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeE
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ig 99 (235)
|| |+||||+|+|+++++++|. +|+++.+.+.++.++.+.+++++++.+.+.+++++.+. +.+|+
T Consensus 1 mM-~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~------~~~ig 64 (299)
T 2e2o_A 1 MM-IIVGVDAGGTKTKAVAYDC---------EGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGE------ADVVG 64 (299)
T ss_dssp CC-CEEEEEECSSCEEEEEECT---------TSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSC------CSEEE
T ss_pred Ce-EEEEEEeCCCcEEEEEEcC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHhcC------CCEEE
Confidence 45 8999999999999999999 89999998877655433688999999999999987542 56899
Q ss_pred EeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEEEeCCCceeEEEecCCcEEEeCCCCcccc
Q 026689 100 LAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILG 179 (235)
Q Consensus 100 igi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~li~GTGs~~~g~~~~G~~~~~Gg~G~llg 179 (235)
+|+||++..+...++.+.|++ |+ .||.++||++++++++.. .++++++++|||++..+. ..|...++|||||++.
T Consensus 65 i~~~G~~~~~~~~~l~~~l~~-~~--~pv~v~ND~~aaa~~e~~-~~~~v~l~~GTG~i~~g~-~~G~~~~aGE~Gh~~~ 139 (299)
T 2e2o_A 65 MGVAGLDSKFDWENFTPLASL-IA--PKVIIQHDGVIALFAETL-GEPGVVVIAGTGSVVEGY-NGKEFLRVGGRGWLLS 139 (299)
T ss_dssp EEETTCCSHHHHHHHHHHHTT-SS--SEEEEEEHHHHHHHHHHT-TSCEEEEEESSSEEEEEE-CSSCEEEEECSCTTTC
T ss_pred EEcCCCCchhHHHHHHHHHHh-CC--CCEEEeCcHHHHHhhccC-CCCeEEEEecCCEEEEEE-cCCeEEecCCcCCCcC
Confidence 999999333344689999999 87 899999999999998876 468999999999766776 5789999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHHHh
Q 026689 180 DWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGYMIY 230 (235)
Q Consensus 180 d~gSg~~ig~~al~~~~~~~dg~~~~t~l~~~~~~~~~~~~~~~l~~~~y~ 230 (235)
|+|++.|+|+++++..++++|++.+.+.|.+.+.+.++..+..+++.++|.
T Consensus 140 ~~g~~c~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~~~~~~~~l~~~~~~ 190 (299)
T 2e2o_A 140 DDGSAYWVGRKALRKVLKMMDGLENKTILYNKVLKTINVKDLDELVMWSYT 190 (299)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHTTCCSHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhCCCCHHHHHHHHHc
Confidence 999999999999999999999999999999999999988888888888774
No 6
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=99.92 E-value=8.5e-24 Score=186.73 Aligned_cols=149 Identities=13% Similarity=0.104 Sum_probs=126.5
Q ss_pred CCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceee
Q 026689 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (235)
Q Consensus 19 ~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~i 98 (235)
+|++|+||||+|+|+++++++|. +|+++.+.+.+..+. .+++++++.+.+.+++++++.+.++.++.+|
T Consensus 3 ~m~~~~lgiDiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~i 71 (326)
T 2qm1_A 3 AMDKKIIGIDLGGTTIKFAILTT---------DGVVQQKWSIETNIL--EDGKHIVPSIIESIRHRIDLYNMKKEDFVGI 71 (326)
T ss_dssp GGGCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCT--TTTTTHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcccEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHHHcCCCccceeEE
Confidence 46679999999999999999999 899999888765432 5778899999999999999888777789999
Q ss_pred EEeccCCCCccH------------HH-HHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeE
Q 026689 99 CLAVSGVNHPTD------------QQ-RILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAY 160 (235)
Q Consensus 99 gigi~G~~~~~~------------~~-~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~ 160 (235)
++++||+.++.. .. ++.+.|++.|+ .||+++||++++++++. .+.++++++++|||+ ++
T Consensus 72 gi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~--~pv~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGi-G~ 148 (326)
T 2qm1_A 72 GMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALG--IPFALDNDANVAALGERWKGAGENNPDVIFITLGTGV-GG 148 (326)
T ss_dssp EEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EE
T ss_pred EEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhC--CCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCce-EE
Confidence 999999853321 14 88999999997 89999999999988763 355789999999997 57
Q ss_pred EEecCCcEEE-----eCCCCcccccc
Q 026689 161 GFTEDGRDAR-----AAGAGPILGDW 181 (235)
Q Consensus 161 g~~~~G~~~~-----~Gg~G~llgd~ 181 (235)
+++.||++++ +|||||++.++
T Consensus 149 giv~~G~l~~G~~g~aGE~Gh~~~~~ 174 (326)
T 2qm1_A 149 GIVAAGKLLHGVAGCAGEVGHVTVDP 174 (326)
T ss_dssp EEEETTEECCCSSSCTTCGGGSBSCT
T ss_pred EEEECCEEeecCCCcccccCcEEECC
Confidence 8889999987 99999998764
No 7
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=99.87 E-value=1.9e-21 Score=172.39 Aligned_cols=153 Identities=20% Similarity=0.166 Sum_probs=126.7
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
+|+||||+|+|+++++++|. +|+++.+.+.++ ..+++++++.+.+.+++++++ .++.+|+++
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~---------~G~i~~~~~~~~----~~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~ 63 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE---------EGRILSTFKVAT----PPTAEGIVDAICAAVAGASEG-----HDVEAVGIG 63 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCBCCCEEEEC----CSSHHHHHHHHHHHHHHHHTT-----CCEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC---------CCCEEEEEEeeC----CCCHHHHHHHHHHHHHHHHhh-----cCceEEEEe
Confidence 48999999999999999999 899998887755 257999999999999998754 268999999
Q ss_pred ccCCCCccH------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEEec
Q 026689 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (235)
Q Consensus 102 i~G~~~~~~------------~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~~~ 164 (235)
+||+.+... ..++.+.|++.|+ .||+++||++++++++. .+.++.++|.+|||+ |++++.
T Consensus 64 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~ 140 (321)
T 3vgl_A 64 AAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGL-GGGIII 140 (321)
T ss_dssp ESSEECTTSSCEEECSSSCCEEECHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEE
T ss_pred ccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhC--CCEEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcce-EEEEEE
Confidence 999965431 2578899999997 89999999999988763 456789999999998 567888
Q ss_pred CCcEEE-----eCCCCccccc----------------cchHHHHHHHHHHHH
Q 026689 165 DGRDAR-----AAGAGPILGD----------------WGSGYGIAAQALTAV 195 (235)
Q Consensus 165 ~G~~~~-----~Gg~G~llgd----------------~gSg~~ig~~al~~~ 195 (235)
||++++ +|++||+.-+ +.|+.+|.+++.+..
T Consensus 141 ~G~l~~G~~g~aGEiGh~~v~~~g~~c~cG~~gclE~~~S~~al~~~~~~~~ 192 (321)
T 3vgl_A 141 GNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRA 192 (321)
T ss_dssp TTEECCCTTSCCCCGGGSBSSTTCSBCTTSCBSBGGGTSSHHHHHHHHHHHH
T ss_pred CCEEecCCCCCCccccceEecCCCCCCCCCCcCcHHHhcCHHHHHHHHHHHh
Confidence 999875 8999997643 468889888876653
No 8
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=99.86 E-value=6.9e-22 Score=175.21 Aligned_cols=158 Identities=19% Similarity=0.126 Sum_probs=125.8
Q ss_pred cCCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccee
Q 026689 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (235)
Q Consensus 18 ~~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (235)
.....|+||||+|+|+++++++|. +|+++.+.+.++.. ..+++++++.+.+.++++++ ...++.+
T Consensus 15 ~~~~~~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~~--~~~~~~~~~~i~~~i~~~~~----~~~~i~g 79 (321)
T 3r8e_A 15 LYFQGMILGIDVGGTSVKFGLVTP---------EGEIQNATRFMTAD--WVNGIGFVESMKLEIGNFLK----QYPIVKG 79 (321)
T ss_dssp ----CCEEEEECCSSEEEEEEECT---------TCCEEEEEEEEHHH--HHTTTCHHHHHHHHHHHHHH----HCTTCCE
T ss_pred hccCcEEEEEEECCCEEEEEEEcC---------CCcEEEEEEEeCCC--CCCHHHHHHHHHHHHHHHHh----ccCCeeE
Confidence 334568999999999999999999 89999988765432 14677889999999999876 2347899
Q ss_pred eEEeccCCCCccH-------------HHHHHHHHHhhC-CCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCce
Q 026689 98 VCLAVSGVNHPTD-------------QQRILNWLRDIF-PGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTI 158 (235)
Q Consensus 98 igigi~G~~~~~~-------------~~~l~~~l~~~~-~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~ 158 (235)
|++++||+.++.. ..++++.|++.| + .||+|+||++++++++. .+.++.++|.+|||+
T Consensus 80 igi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGi- 156 (321)
T 3r8e_A 80 VGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPH--IHFKIENDAKCAALGEYYFGENKRMQTFILLALGTGV- 156 (321)
T ss_dssp EEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTT--SEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-
T ss_pred EEEEecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCC--CCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCce-
Confidence 9999999965321 257889999999 6 89999999999988763 456789999999998
Q ss_pred eEEEecCCcEEE-----eCCCCcccccc--------chHHHHHHHHHHH
Q 026689 159 AYGFTEDGRDAR-----AAGAGPILGDW--------GSGYGIAAQALTA 194 (235)
Q Consensus 159 ~~g~~~~G~~~~-----~Gg~G~llgd~--------gSg~~ig~~al~~ 194 (235)
|++++.||++++ +|||||+. ++ .|+.+|.+++.+.
T Consensus 157 G~gii~~G~l~~G~~g~aGEiGh~~-~~~~gclE~~~S~~al~~~~~~~ 204 (321)
T 3r8e_A 157 GSGVMMNGKLFIGGRGNGTEVGHML-TTRGKSLENQVGINHLIAYTHEQ 204 (321)
T ss_dssp EEEEEETTEECCCTTSCCCCGGGCB-CTTSSBSHHHHSHHHHHHHHHHH
T ss_pred EEEEEECCEEecCCCCCCccccccc-CCCCCcHHHhcCHHHHHHHHHHH
Confidence 567889999987 99999998 64 4677777766554
No 9
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.86 E-value=2.8e-21 Score=177.67 Aligned_cols=145 Identities=13% Similarity=0.085 Sum_probs=123.5
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.|+||||+|+|+++++++|. +|+++.+.+.+.. . .+++++++.+.+.+++++++.+.++.++.+|+|+
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~---------~G~il~~~~~~~~-~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~ 175 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHEL---------GGEVLIDTKIDIH-E--IDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAIT 175 (429)
T ss_dssp EEEEEEEEETTEEEEEEEET---------TSCEEEEEEEECC-C--CBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEE
T ss_pred CEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCC-C--CCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEe
Confidence 48999999999999999999 8999998877543 2 4689999999999999999888777789999999
Q ss_pred ccCCCCccH------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEEec
Q 026689 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (235)
Q Consensus 102 i~G~~~~~~------------~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~~~ 164 (235)
+||+.++.. ..++.+.|++.|+ .||+|+||++++++++. .+.+++++|++|||++ +|++.
T Consensus 176 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG-~giv~ 252 (429)
T 1z05_A 176 LPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATG--LPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLG-AGIVL 252 (429)
T ss_dssp ESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE-EEEEE
T ss_pred ccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEE-EEEEE
Confidence 999854321 2478899999997 89999999999988873 3567899999999985 67889
Q ss_pred CCcEEE-----eCCCCcccccc
Q 026689 165 DGRDAR-----AAGAGPILGDW 181 (235)
Q Consensus 165 ~G~~~~-----~Gg~G~llgd~ 181 (235)
||++++ +|||||+..++
T Consensus 253 ~G~l~~G~~g~AGEiGH~~v~~ 274 (429)
T 1z05_A 253 DGRVLQGRHGNIGELGHIQIDP 274 (429)
T ss_dssp TTEECCTTTTCTTBCTTSBCCT
T ss_pred CCEEeeCCCCcccccCceEEcC
Confidence 998875 79999998763
No 10
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=99.86 E-value=1.8e-21 Score=173.63 Aligned_cols=144 Identities=17% Similarity=0.155 Sum_probs=119.4
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.|+||||+|+|+++++++|. +|+++.+.+.+.. .+++++++.+.+.+++++.+.+..+.++.+|+++
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~ 96 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM---------KGEIVKKYTQFNP----KTYEERINLILQMCVEAAAEAVKLNCRILGVGIS 96 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECC----SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC---------CCcEEEEEEEcCC----CCHHHHHHHHHHHHHHHHHhcccccCceEEEEEe
Confidence 58999999999999999999 8999998876532 3688899999999999887765455679999999
Q ss_pred ccCCCCcc------------HH--HHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEE
Q 026689 102 VSGVNHPT------------DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 102 i~G~~~~~------------~~--~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~ 162 (235)
+||+.+++ .| .++.+.|++.|+ .||+|+||++++++++. .+.++++++++|||+ ++++
T Consensus 97 ~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGi-G~gi 173 (343)
T 2yhw_A 97 TGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLH--LPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGI-GGGI 173 (343)
T ss_dssp ESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSE-EEEE
T ss_pred cccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCE-EEEE
Confidence 99985321 11 367889999997 89999999999998874 345789999999998 4678
Q ss_pred ecCCcEEE-----eCCCCcccccc
Q 026689 163 TEDGRDAR-----AAGAGPILGDW 181 (235)
Q Consensus 163 ~~~G~~~~-----~Gg~G~llgd~ 181 (235)
+.||++++ +|||||++.++
T Consensus 174 i~~G~l~~G~~g~aGEiGh~~~~~ 197 (343)
T 2yhw_A 174 IHQHELIHGSSFCAAELGHLVVSL 197 (343)
T ss_dssp EETTEECCCTTSCTTCGGGCBCCC
T ss_pred EECCEEecCCCCcccccCCEEEcc
Confidence 89999876 89999998764
No 11
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=99.85 E-value=2.8e-20 Score=164.78 Aligned_cols=142 Identities=16% Similarity=0.110 Sum_probs=117.0
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.++||||+|+|+++++++|. +|+++.+.+.++.+ .+++++++.|.+.++++..+.+ .+.+|++|
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~---------~g~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~ 87 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS---------TRRLQWEKRVPTPH---TSYSAFLDAVCELVEEADQRFG----VKGSVGIG 87 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCC---SCHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC---------CCCEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 37999999999999999999 89999988776543 3688899999999998876543 47889999
Q ss_pred ccCCCCccH------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEEec
Q 026689 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (235)
Q Consensus 102 i~G~~~~~~------------~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~~~ 164 (235)
+||+.++.. ..++.+.|++.|+ .||.|+||++++++++. .+.+++++|++|||++ ++++.
T Consensus 88 ~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pv~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGiG-~giv~ 164 (327)
T 2ap1_A 88 IPGMPETEDGTLYAANVPAASGKPLRADLSARLD--RDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVG-GGLVL 164 (327)
T ss_dssp ESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHT--SCEEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEE-EEEEE
T ss_pred eeeeEECCCCEEEccCCCccCCCChHHHHHHHHC--CCEEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcEE-EEEEE
Confidence 999965421 2467899999997 79999999999998874 2356899999999984 67888
Q ss_pred CCcEEE-----eCCCCccccccc
Q 026689 165 DGRDAR-----AAGAGPILGDWG 182 (235)
Q Consensus 165 ~G~~~~-----~Gg~G~llgd~g 182 (235)
||++++ +|+|||+..++.
T Consensus 165 ~G~l~~G~~g~aGE~Gh~~~~~~ 187 (327)
T 2ap1_A 165 NGKPITGQSYITGEFGHMRLPVD 187 (327)
T ss_dssp TTEEECCTTSCTTCGGGSBCCHH
T ss_pred CCEEeecCCCcccccccEEEecC
Confidence 998875 799999987654
No 12
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=99.85 E-value=4e-21 Score=175.16 Aligned_cols=146 Identities=11% Similarity=0.074 Sum_probs=122.0
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEE
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igi 100 (235)
..|+||||+|+|+++++++|. +|+++.+.+.+.. ..+++++++.+.+.+++++++.+.++.+|.+|++
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~---------~G~il~~~~~~~~---~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi 151 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDL---------SSKLVVEESQELA---LKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAI 151 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEET---------TCCEEEEEEEECC---SSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEE
T ss_pred ccEEEEEEEcCCEEEEEEEcC---------CCCEEEEEEecCC---CCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEE
Confidence 358999999999999999999 8999998877652 2577889999999999999887766678999999
Q ss_pred eccCCCCcc-----------H--HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEE
Q 026689 101 AVSGVNHPT-----------D--QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 101 gi~G~~~~~-----------~--~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~ 162 (235)
++||+.++. . ..++.+.|++.|+ .||+|+||++++++++. .+.++.+++.+|||++ +++
T Consensus 152 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG-~gi 228 (406)
T 1z6r_A 152 TLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTG--VPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVG-AGV 228 (406)
T ss_dssp EESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE-EEE
T ss_pred EeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEE-EEE
Confidence 999985431 1 2478899999997 89999999999988863 3557899999999985 678
Q ss_pred ecCCcEEE-----eCCCCcccccc
Q 026689 163 TEDGRDAR-----AAGAGPILGDW 181 (235)
Q Consensus 163 ~~~G~~~~-----~Gg~G~llgd~ 181 (235)
+.||++++ +|||||+..++
T Consensus 229 v~~G~l~~G~~g~AGEiGh~~v~~ 252 (406)
T 1z6r_A 229 ITDGHLLHAGSSSLVEIGHTQVDP 252 (406)
T ss_dssp EETTEETTTTSSCCBCGGGSBSCT
T ss_pred EECCEEeecCCCcCccCCceEecC
Confidence 88998764 89999998664
No 13
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=99.85 E-value=9.8e-21 Score=168.37 Aligned_cols=139 Identities=19% Similarity=0.102 Sum_probs=116.3
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
|+||||+|+|+++++++|. +|+++.+.+.++.+ .+++++++.+.+.++++..+.+ .+.+|++++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~ 88 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE---------KLERVATERVPTPT---DDYPLLLETIAGLVAKYDQEFA----CEGKIGLGL 88 (327)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCT---TCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC---------CCcEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence 7899999999999999999 89999988876542 3789999999999999887653 368999999
Q ss_pred cCCCCcc------------HHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEEecC
Q 026689 103 SGVNHPT------------DQQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTED 165 (235)
Q Consensus 103 ~G~~~~~------------~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~~~~ 165 (235)
||+.++. ...++.+.|++.|+ .||+|+||++++++++. ++.++.++|++|||++ ++++.|
T Consensus 89 pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pV~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGiG-~gii~~ 165 (327)
T 4db3_A 89 PGMEDADDATVLTVNVPAAKGKPLRADLEAKIG--RSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFG-GGLIYE 165 (327)
T ss_dssp SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHS--SCCEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSEE-EEEEET
T ss_pred eccEeCCCCEEEcCCCccccCCCHHHHHHHHHC--CCEEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccce-EEEEEC
Confidence 9997642 12578899999998 89999999999998874 3457899999999984 678889
Q ss_pred CcEEE-----eCCCCccccc
Q 026689 166 GRDAR-----AAGAGPILGD 180 (235)
Q Consensus 166 G~~~~-----~Gg~G~llgd 180 (235)
|++++ +|++||+.-+
T Consensus 166 G~l~~G~~g~aGEiGh~~v~ 185 (327)
T 4db3_A 166 GKVFSGRNNVAGELGHMRLP 185 (327)
T ss_dssp TEECCCTTSCTTCGGGSBCC
T ss_pred CEEeecCCCcCcccccEEec
Confidence 98864 7999998644
No 14
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=99.84 E-value=6.9e-21 Score=172.51 Aligned_cols=146 Identities=18% Similarity=0.182 Sum_probs=121.9
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.|+||||+|+|+++++++|. +|+++.+.+.+... ..+++++++.+.+.+++++++.+.++.++.+|++|
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~---------~G~vl~~~~~~~~~--~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~ 155 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDA---------SMNILAHEAHPLPS--QSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVA 155 (380)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCS--SCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred CeEEEEEECCCEEEEEEECC---------CCCEEEEEEEccCC--CCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEE
Confidence 48999999999999999999 89999988775432 24799999999999999998876656689999999
Q ss_pred ccCCCCccH------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-CCC--CCEEEEEeCCCceeEEEecCC
Q 026689 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-MGK--LHGCVLIAGTGTIAYGFTEDG 166 (235)
Q Consensus 102 i~G~~~~~~------------~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-~g~--~~gi~li~GTGs~~~g~~~~G 166 (235)
+||+.++.. ..++.+.|++.|+ .||+|+||++++++++. .+. +++++|.+|||++ +|++.||
T Consensus 156 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG-~giv~~G 232 (380)
T 2hoe_A 156 APGPIDTERGIIIDPRNFPLSQIPLANLLKEKYG--IEVWVENDADMGAVGEKWYTKRDDSFAWILTGKGIG-AGIIIDG 232 (380)
T ss_dssp ESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHC--SEEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCE-EEEEETT
T ss_pred eeccEECCCCEEeccCCCCCcCCChHHHHHHHhC--CCEEEechHHHHHHHHHHhCCCCCcEEEEEeCCceE-EEEEECC
Confidence 999965321 2478899999997 89999999999998874 222 7899999999985 6788899
Q ss_pred cEEE-----eCCCCcccccc
Q 026689 167 RDAR-----AAGAGPILGDW 181 (235)
Q Consensus 167 ~~~~-----~Gg~G~llgd~ 181 (235)
++++ +|+|||+..+.
T Consensus 233 ~l~~G~~g~aGEiGh~~v~~ 252 (380)
T 2hoe_A 233 ELYRGENGYAGEIGYTRVFN 252 (380)
T ss_dssp EECCCSSSCCCCGGGCEEEC
T ss_pred EEeccCCCccccccceEecC
Confidence 8864 89999987653
No 15
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=99.84 E-value=7.4e-21 Score=165.46 Aligned_cols=138 Identities=17% Similarity=0.124 Sum_probs=112.5
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
++||||+|+|+++++++|. +|+++.+.+.++.+. .+++++++.+.+.+++++. ++.+|++|+
T Consensus 2 ~~lgidiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~-------~~~~igi~~ 63 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGA---------DGQIRDRRELPTPAS--QTPEALRDALSALVSPLQA-------HAQRVAIAS 63 (289)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHTTTGG-------GCSEEEEEE
T ss_pred eEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCCCC--CCHHHHHHHHHHHHHHHHh-------hCCEEEEEe
Confidence 6899999999999999999 899999888765432 4688888888888877643 245799999
Q ss_pred cCCCCcc-----------HH--HHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEEec
Q 026689 103 SGVNHPT-----------DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (235)
Q Consensus 103 ~G~~~~~-----------~~--~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~~~ 164 (235)
||+.++. .| .++.+.|++.|+ .||.++||++++++++. .+. ++++|++|||+ +++++.
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtGi-G~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTN--LPTIAINDAQAAAWAEFQALDGDIT-DMVFITVSTGV-GGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSSE-EEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHC--CCEEEechHHHHHHHHHHhCCCCCc-eEEEEEeCccE-EEEEEE
Confidence 9995321 12 468899999998 79999999999998873 234 89999999998 568889
Q ss_pred CCcEEE-----eCCCCccccccc
Q 026689 165 DGRDAR-----AAGAGPILGDWG 182 (235)
Q Consensus 165 ~G~~~~-----~Gg~G~llgd~g 182 (235)
||++++ +|||||+..|++
T Consensus 140 ~G~l~~G~~g~aGE~Gh~~~~~~ 162 (289)
T 2aa4_A 140 GCKLLTGPGGLAGHIGHTLADPH 162 (289)
T ss_dssp TTEEECCTTSCCCCGGGSBSCTT
T ss_pred CCEEeeCCCCCCccCCcEEECCC
Confidence 999885 899999987753
No 16
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.84 E-value=5.1e-20 Score=160.54 Aligned_cols=133 Identities=14% Similarity=0.133 Sum_probs=108.2
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
++||||+|+|+++++++|. +|+++.+.+.++. .+++++++.+.+.+++ .++.+|++|+
T Consensus 5 ~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~----~~~~~~~~~i~~~i~~---------~~i~gigi~~ 62 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTP---------DGKILDKTSISTP----ENLEDLLAWLDQRLSE---------QDYSGIAMSV 62 (292)
T ss_dssp CEEEEEEETTEEEEEEECT---------TCCEEEEEEECCC----SSHHHHHHHHHHHHTT---------SCCSEEEEEE
T ss_pred EEEEEEECCCEEEEEEECC---------CCCEEEEEEEeCC----CCHHHHHHHHHHHHHh---------CCCcEEEEEe
Confidence 5899999999999999999 8999998877543 3677777776665543 3688999999
Q ss_pred cCCCCcc-----------H--HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc---CCCCCEEEEEeCCCceeEEEecCC
Q 026689 103 SGVNHPT-----------D--QQRILNWLRDIFPGNVRLYVHNDALAALASGT---MGKLHGCVLIAGTGTIAYGFTEDG 166 (235)
Q Consensus 103 ~G~~~~~-----------~--~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~---~g~~~gi~li~GTGs~~~g~~~~G 166 (235)
||+.++. . ..++.+.| +.|+ .||.++||++++++++. .+.+++++|++|||+ |++++.||
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~--~pv~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGi-G~giv~~G 138 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQ--LPVHLENDANCVGLSELLAHPELENAACVVIGTGI-GGAMIING 138 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGC--CCEEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSE-EEEEEETT
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcC--CCEEEechHHHHHHHHHHhcCCCCeEEEEEECCce-EEEEEECC
Confidence 9995432 1 24788889 8887 89999999999999874 366789999999998 46788999
Q ss_pred cEEE-----eCCCCcccccc
Q 026689 167 RDAR-----AAGAGPILGDW 181 (235)
Q Consensus 167 ~~~~-----~Gg~G~llgd~ 181 (235)
++++ +|+|||+..+.
T Consensus 139 ~l~~G~~g~aGEiGh~~~~~ 158 (292)
T 2gup_A 139 RLHRGRHGLGGEFGYMTTLA 158 (292)
T ss_dssp EEECCTTSCTTCGGGCBSSC
T ss_pred EEEecCCCCCccceeEEecc
Confidence 9875 69999998764
No 17
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=99.84 E-value=2.1e-20 Score=163.99 Aligned_cols=135 Identities=20% Similarity=0.207 Sum_probs=107.7
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
|+||||+|+|+++++++|. +|+++.+.+.+..+ .+++++++.+.+. +.+ ..++.+|++++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~----~~~----~~~i~gigi~~ 64 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP---------HGEIILTKSAEISG---SDGDQILAEMKVF----LAE----NTDVTGIAVSA 64 (297)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECST---TCHHHHHHHHHHH----HHT----CTTCCEEEEEE
T ss_pred EEEEEEeCCCeEEEEEECC---------CCCEEEEEEecCCC---CCHHHHHHHHHHH----Hhh----cCCeeEEEEec
Confidence 7999999999999999999 99999988876432 3566666655543 332 23689999999
Q ss_pred cCCCCcc-----------HH--HHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEEec
Q 026689 103 SGVNHPT-----------DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (235)
Q Consensus 103 ~G~~~~~-----------~~--~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~~~ 164 (235)
||+.++. .| .++++.|++.|+ .||+++||++++++++. ++.++.++|.+|||++ ++++.
T Consensus 65 pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pV~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG-~giv~ 141 (297)
T 4htl_A 65 PGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETG--LPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIG-GGIFS 141 (297)
T ss_dssp SSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE-EEEEE
T ss_pred CcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHC--cCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcceE-EEEEE
Confidence 9996532 12 468899999998 89999999999988874 4567899999999985 67888
Q ss_pred CCcEEE-----eCCCCccccc
Q 026689 165 DGRDAR-----AAGAGPILGD 180 (235)
Q Consensus 165 ~G~~~~-----~Gg~G~llgd 180 (235)
||++++ +|++||+.-+
T Consensus 142 ~G~l~~G~~g~aGEiGh~~~~ 162 (297)
T 4htl_A 142 NGELVRGGRFRAGEFGYMFSE 162 (297)
T ss_dssp TTEECCCTTSCCCCGGGSBSS
T ss_pred CCEEEecCCCCcccccceEec
Confidence 999875 8999998654
No 18
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=99.83 E-value=2.1e-20 Score=165.23 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=106.9
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.|+||||+|+|+++++++|. +|+++.+.+.++.. ..++.+++.+.+.+++++.+.+. ++.+|++|
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~~---~i~gigi~ 71 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA---------EGETLHCEKKRTAE---VIAPGLVSGIGEMIDEQLRRFNA---RCHGLVMG 71 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET---------TSCEEEEEEEEHHH---HHTTCHHHHHHHHHHHHHHHHTE---EEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCcc---ccHHHHHHHHHHHHHHHHHhcCC---CeeEEEEe
Confidence 48999999999999999999 89999987664321 22456778888888887766542 58999999
Q ss_pred ccCCCCccH-------------H--HHHHHHHHhhCCCCceEEEeCcHHHHHHhhc----CCCCCEEEEEeCCCceeEEE
Q 026689 102 VSGVNHPTD-------------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGT----MGKLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 102 i~G~~~~~~-------------~--~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~----~g~~~gi~li~GTGs~~~g~ 162 (235)
+||+.++.. + .++++.|++.|+ .||+++||++++++++. .+.++.+++.+|||++ +++
T Consensus 72 ~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~--~pv~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGiG-~gi 148 (310)
T 3htv_A 72 FPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLN--CPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMG-FAV 148 (310)
T ss_dssp ESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSEE-EEE
T ss_pred ccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhC--CCEEEeeHHHHHHHHHHhhcccCCceEEEEEeceeEE-EEE
Confidence 999965321 1 478999999998 89999999999876542 3456799999999995 578
Q ss_pred ecCCcEEE-----eCCCCccccc
Q 026689 163 TEDGRDAR-----AAGAGPILGD 180 (235)
Q Consensus 163 ~~~G~~~~-----~Gg~G~llgd 180 (235)
+.||++++ +|++||+.-+
T Consensus 149 i~~G~l~~G~~g~aGEiGh~~v~ 171 (310)
T 3htv_A 149 WMNGAPWTGAHGVAGELGHIPLG 171 (310)
T ss_dssp EETTEEECCSSSCCCC-------
T ss_pred EECCEEeecCCCCceeCcceEeC
Confidence 89999875 7999997643
No 19
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=99.83 E-value=1.6e-20 Score=165.28 Aligned_cols=138 Identities=20% Similarity=0.185 Sum_probs=111.0
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
|+||||+|+|+++++++|. + +++.+.+.++. . .+++++++.+.+.+++++++. +.++.+|++++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~---------~-~~l~~~~~~~~-~--~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~ 65 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDG---------K-RLLSKVVVPTP-K--EGGERVAEALAEAAERAEREA---GVRGEAIGLGT 65 (302)
T ss_dssp CEEEEEECSSEEEEEEECS---------S-SBSCCEEEECC-S--SCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE
T ss_pred EEEEEEEcCCEEEEEEEeC---------C-CcEEEEEEcCC-C--CChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe
Confidence 7999999999999999998 6 45555555433 2 345889999999999988765 34789999999
Q ss_pred cCCCCccH-------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCceeEEEec
Q 026689 103 SGVNHPTD-------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (235)
Q Consensus 103 ~G~~~~~~-------------~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~~g~~~ 164 (235)
||+.++.. ..++.+.|+++|+ .||+++||++++++++. .+.++.++|.+|||++ ++++.
T Consensus 66 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG-~gii~ 142 (302)
T 3vov_A 66 PGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATG--RPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIG-GGVVL 142 (302)
T ss_dssp SSCEETTTTEEC---CCTTCTTCCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEE-EEEEE
T ss_pred cccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhC--CCEEEEechHHHHHHHHHhCCCCCCCCEEEEEECCcee-EEEEE
Confidence 99964321 2468899999998 89999999999988874 4567899999999985 67888
Q ss_pred CCcEEE-----eCCCCcccc
Q 026689 165 DGRDAR-----AAGAGPILG 179 (235)
Q Consensus 165 ~G~~~~-----~Gg~G~llg 179 (235)
||++++ +|++||+.-
T Consensus 143 ~g~l~~G~~g~aGEiGh~~v 162 (302)
T 3vov_A 143 GGRVLRGERGQGGELGHLTL 162 (302)
T ss_dssp TTEECCCTTSCTTCGGGSBS
T ss_pred CCEEeeCCCCCCccccceEe
Confidence 998864 789999864
No 20
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.81 E-value=1.2e-19 Score=160.04 Aligned_cols=132 Identities=17% Similarity=0.160 Sum_probs=106.5
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
+|+||||+|+|+++++++|. +|+++.+.+.++. +++++++.+.+.++ + .++.+|+++
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~t~-----~~~~~l~~i~~~~~----~-----~~i~gigi~ 59 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE---------DGTIIDRIEFPTX-----MPDETIEXVIQYFS----Q-----FSLQAIGIG 59 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT---------TSCEEEEEEEECC-----CHHHHHHHHHHHHT----T-----SCCSEEEEE
T ss_pred cEEEEEEECcceeEEEEEEC---------CCcEEEEEEecCC-----ChHHHHHHHHHHhc----c-----CCceEEEEE
Confidence 37899999999999999999 8999998877542 46666666655443 2 268999999
Q ss_pred ccCCCCcc-----------------HHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCEEEEEeCCCcee
Q 026689 102 VSGVNHPT-----------------DQQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIA 159 (235)
Q Consensus 102 i~G~~~~~-----------------~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~~gi~li~GTGs~~ 159 (235)
+||+.+.. ...++++.|+++|+ .||.++||++++++++. ++.++.++|.+|||++
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGiG- 136 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMX--IPVGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGIG- 136 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEE-
T ss_pred eceeeccccccccccEEecCCCCCccCCChHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCceE-
Confidence 99995431 12578999999998 89999999999998873 4567899999999985
Q ss_pred EEEecCCcEEE---eCCCCcccc
Q 026689 160 YGFTEDGRDAR---AAGAGPILG 179 (235)
Q Consensus 160 ~g~~~~G~~~~---~Gg~G~llg 179 (235)
++++.||++++ +|++||+.-
T Consensus 137 ~gii~~G~l~~G~~agEiGh~~v 159 (302)
T 3epq_A 137 AGAIVEGRLLQGLSHPEMGHIYI 159 (302)
T ss_dssp EEEEETTEECCSSSCCCGGGCCC
T ss_pred EEEEECCEEcccCCCCccceEEE
Confidence 67889999886 789999864
No 21
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.81 E-value=1.2e-19 Score=156.77 Aligned_cols=143 Identities=21% Similarity=0.185 Sum_probs=111.1
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCC-CCEEEEE-EeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEE
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDP-LPVLARA-AAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~-g~il~~~-~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igi 100 (235)
|+||||+|+|+++++++|. + ++++.+. +.++. . ..+++++++.+.+.+++++++... ...+.+|++
T Consensus 13 ~~lgidiggt~i~~~l~dl---------~~g~i~~~~~~~~~~-~-~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~igi 80 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDL---------KKGKLLGERFRVPTP-Q-PATPESVAEAVALVVAELSARPEA-PAAGSPVGV 80 (267)
T ss_dssp CEEEEEECSSEEEEEEEET---------TTTEEEEEEEEEECC-S-SCCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEEE
T ss_pred EEEEEEECCCEEEEEEEEC---------CCCeEEEEEEecCCC-c-cCCHHHHHHHHHHHHHHHHHhccc-cCccceEEE
Confidence 7899999999999999998 5 6777433 43332 2 247889999999999998764331 124568999
Q ss_pred eccCCCC-------cc---HH--HHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCC-CEEEEEeCCCceeEEE
Q 026689 101 AVSGVNH-------PT---DQ--QRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKL-HGCVLIAGTGTIAYGF 162 (235)
Q Consensus 101 gi~G~~~-------~~---~~--~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-----~g~~-~gi~li~GTGs~~~g~ 162 (235)
|+||+.+ +. .| .++.+.|+++|+ .||+++||++++++++. ++.+ +.++|.+|||+ |+|+
T Consensus 81 ~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtGI-G~gi 157 (267)
T 1woq_A 81 TFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLG--RPVEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGI-GSAF 157 (267)
T ss_dssp EESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSSE-EEEE
T ss_pred EccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHC--CCEEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcce-EEEE
Confidence 9999842 11 12 578899999998 89999999999998873 2334 47899999998 5688
Q ss_pred ecCCcEEEeCCCCccccc
Q 026689 163 TEDGRDARAAGAGPILGD 180 (235)
Q Consensus 163 ~~~G~~~~~Gg~G~llgd 180 (235)
+.||++++.||+||+.-+
T Consensus 158 v~~G~l~~GgEiGh~~v~ 175 (267)
T 1woq_A 158 IFDGKLVPNAELGHLEID 175 (267)
T ss_dssp EETTEEETTCCGGGCEET
T ss_pred EECCEEccCceeeeEEec
Confidence 899999999999998755
No 22
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.78 E-value=2.3e-18 Score=155.83 Aligned_cols=151 Identities=17% Similarity=0.107 Sum_probs=116.3
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEE-EeCCCCCccCCHHHHHHHHHH---HHHHHHHHcCCCcccce
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEK---VMADALLKSGSNRSAVR 96 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~-~~~~~~~~~~~~~~~~~~i~~---~i~~~l~~~~~~~~~i~ 96 (235)
..++||||+|+|+++++++| . |+++.+. +.++. . .+++++++.+.+ .+++++. .++.
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d-~---------G~il~~~~~~~~~-~--~~~~~~l~~i~~~~~~i~~~~~------~~i~ 68 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ-G---------GKEIADPVVLPAC-A--DCLDKCLGNLVEGFKAIQAGLP------EAPV 68 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE-T---------TEECSCCEEEECC-T--TCHHHHHHHHHHHHHHHHTTCS------SCCC
T ss_pred CCEEEEEEECcceEEEEEEE-C---------CEEEEEEEEEECC-C--CCHHHHHHHHHHHHHHHHHHhh------cCCe
Confidence 35899999999999999998 3 6677665 55433 2 278898888888 5555432 4689
Q ss_pred eeEEeccCCCCcc-----------HH---HHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-C-----------------C
Q 026689 97 AVCLAVSGVNHPT-----------DQ---QRILNWLRDIFPGNVRLYVHNDALAALASGT-M-----------------G 144 (235)
Q Consensus 97 ~igigi~G~~~~~-----------~~---~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-~-----------------g 144 (235)
+|+|++||+.++. .| .++.+.|++.|+ .||+++||++++++++. . +
T Consensus 69 gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g--~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~ 146 (366)
T 3mcp_A 69 AISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFG--IPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKR 146 (366)
T ss_dssp EEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHC--SCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCC
T ss_pred EEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHC--CCEEEechhhHHHHHHHHhCCCcccccccccccccCC
Confidence 9999999996431 12 478899999998 89999999999988763 2 3
Q ss_pred CCCEEEEEeCCCceeEEEecCCcEEE-----eCCCCccc---------cccchHHHHHHHHHH
Q 026689 145 KLHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPIL---------GDWGSGYGIAAQALT 193 (235)
Q Consensus 145 ~~~gi~li~GTGs~~~g~~~~G~~~~-----~Gg~G~ll---------gd~gSg~~ig~~al~ 193 (235)
.++.++|.+|||++ +|++.||++++ +|++||+. ....|+.+|.+++.+
T Consensus 147 ~~~~v~l~lGtGIG-~givi~G~l~~G~~g~AGEiGH~~~~CG~~GclE~~~S~~al~~~~~~ 208 (366)
T 3mcp_A 147 YKNLLGVTLGTGFG-AGVVIDGELLRGDNAAGGYVWCLRNKKYPEYIVEESVSIRAVMRVYAE 208 (366)
T ss_dssp CCEEEEEEESSSEE-EEEEETTEECCCTTSCTTCCTTSBCSSCTTSBGGGTSSHHHHHHHHHH
T ss_pred CCcEEEEEECCcce-EEEEECCEEecCCCCCCceeecccCCCCCCcceeeeecHHHHHHHHHH
Confidence 46899999999995 67888999875 89999986 335678887776543
No 23
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.76 E-value=2.3e-18 Score=146.18 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=100.4
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.++|+||+|||++| ++|. +|++. .+.++. . ..+++++.+.+.+.+++ . ++.+|+++
T Consensus 6 ~~~lgiDIGGT~i~--~~d~---------~g~~~--~~~~t~-~-~~~~~~~~~~i~~~i~~----~-----~i~gigi~ 61 (226)
T 3lm2_A 6 QTVLAIDIGGSHVK--IGLS---------TDGEE--RKVESG-K-TMTGPEMVAAVTAMAKD----M-----TYDVIAMG 61 (226)
T ss_dssp CCEEEEEECSSEEE--EEET---------TTCCE--EEEECC-T-TCCHHHHHHHHHHHTTT----C-----CCSEEEEE
T ss_pred CEEEEEEECCCEEE--EEEC---------CCCEE--EEEECC-C-CCCHHHHHHHHHHHHHh----C-----CCCEEEEE
Confidence 48999999999999 4677 67763 233322 1 24677777766665432 2 57899999
Q ss_pred ccCCCCccH-----------H--HHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEEEeCCCceeEEEecCCcE
Q 026689 102 VSGVNHPTD-----------Q--QRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRD 168 (235)
Q Consensus 102 i~G~~~~~~-----------~--~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~li~GTGs~~~g~~~~G~~ 168 (235)
+||+.++.. + .++ +++|+ .||.++||++++++++... .+.+++.+|||++ ++++.||++
T Consensus 62 ~pG~Vd~~~~~~~~~nl~~~w~~~~l----~~~~~--~pv~v~NDanaaalge~~~-~~~~~l~~GtGiG-~gii~~G~l 133 (226)
T 3lm2_A 62 YPGPVVHNKPLREPVNLGEGWVGYDY----EGAFG--RPVRIVNDALMQAIGSYNG-GRMLFLGLGTGLG-AAMIVENVA 133 (226)
T ss_dssp ESSCEETTEECSCCTTSCSCCTTCCH----HHHHT--SCEEEEEHHHHHHHHHCCS-SEEEEEEESSSEE-EEEEETTEE
T ss_pred EEeEEECCeEEEECCcCCccccCCch----HHhcC--CeEEEEEHHHHHHHHHhhc-CcEEEEEeCCceE-EEEEECCEE
Confidence 999964321 1 233 45676 7999999999999998755 5899999999985 678899999
Q ss_pred EEeCCCCccccc-------cchHHHHHHHH
Q 026689 169 ARAAGAGPILGD-------WGSGYGIAAQA 191 (235)
Q Consensus 169 ~~~Gg~G~llgd-------~gSg~~ig~~a 191 (235)
++ ||+||+.-+ +.|+.+|.+++
T Consensus 134 ~~-GEiGH~~v~~~gclE~~~s~~al~~~~ 162 (226)
T 3lm2_A 134 QP-MEIAHLPYRKGKTYEHYVSEAYREKKG 162 (226)
T ss_dssp EE-ECCTTSEEETTEEHHHHTCHHHHHHHC
T ss_pred ee-eeeeeEEecCCCcHHHHhCHHHHHHHH
Confidence 88 999998644 45677766554
No 24
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.73 E-value=3.3e-17 Score=145.64 Aligned_cols=134 Identities=15% Similarity=0.017 Sum_probs=97.2
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEE
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igi 100 (235)
|.|+|+||+|||++|++++|.. +++++.+.+.++..+ .. +.+.+++++++.+ .++.+|+|
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~--------~g~i~~~~~~~~~~~--~~-------~~~~i~~~~~~~~---~~i~gigi 72 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIA--------SGEISQAKTYSGLDY--PS-------LEAVIRVYLEEHK---VEVKDGCI 72 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETT--------TCCEEEEEEEEGGGC--SC-------HHHHHHHHHHHSC---CCCCEEEE
T ss_pred CCEEEEEEechhheEEEEEECC--------CCcEEEEEEecCCCc--CC-------HHHHHHHHHHhcC---CCccEEEE
Confidence 4599999999999999999941 688887766554322 12 3344445555543 25889999
Q ss_pred eccCCCCcc--------HHHHHHHHHHhhCCCCce-EEEeCcHHHHHHhhc---------------CCCCCEEEEEeCCC
Q 026689 101 AVSGVNHPT--------DQQRILNWLRDIFPGNVR-LYVHNDALAALASGT---------------MGKLHGCVLIAGTG 156 (235)
Q Consensus 101 gi~G~~~~~--------~~~~l~~~l~~~~~~~~~-v~v~NDa~~a~~~~~---------------~g~~~gi~li~GTG 156 (235)
|+||+.+.. +..+ .+.|++.|+ .| |.|+||++++++++. ++.++.++|++|||
T Consensus 73 ~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~~--~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTG 149 (332)
T 1sz2_A 73 AIACPITGDWVAMTNHTWAFS-IAEMKKNLG--FSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTG 149 (332)
T ss_dssp EESSCCCSSEECCSSSCCCEE-HHHHHHHHT--CSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSS
T ss_pred EEeCceeCCEEeeeCCCCcCC-HHHHHHHhC--CCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCcc
Confidence 999997532 1134 478888887 77 999999999999874 23467899999999
Q ss_pred ceeEEEecCCc---EEEeCCCCccc
Q 026689 157 TIAYGFTEDGR---DARAAGAGPIL 178 (235)
Q Consensus 157 s~~~g~~~~G~---~~~~Gg~G~ll 178 (235)
++ .+++.||+ ...+||+||+.
T Consensus 150 iG-~giv~~g~~G~~g~agE~GH~~ 173 (332)
T 1sz2_A 150 LG-VAHLVHVDKRWVSLPGEGGHVD 173 (332)
T ss_dssp EE-EEEEEEETTEEEEEECCGGGSB
T ss_pred ce-EEEEecCCCCeeeCCCCccccC
Confidence 95 56666654 44689999964
No 25
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.73 E-value=4.1e-18 Score=153.82 Aligned_cols=145 Identities=16% Similarity=0.043 Sum_probs=105.5
Q ss_pred cEEEEEEcCccceEEEEEeC-ccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEE
Q 026689 22 EVILGLDGGTTSTVCICMPV-ISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~-~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igi 100 (235)
+|+||||+|+|+++++++|. .. ++|+++.+.+..++ .+++.+++.+.+.++++.... +.++.+|+|
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~------~~g~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi 95 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKN------DSVHACVTRYSMKR----KDITEIIEFFNEIIELMPASV---MKRVKAGVI 95 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGG------GCEEEEEEEEECTT----CBGGGHHHHHHHHHHHSCHHH---HTTEEEEEE
T ss_pred CeEEEEEEccccEEEEEEecccC------CCccEEEEeeecCC----CCHHHHHHHHHHHHHHHhhcc---cccccEEEE
Confidence 48999999999999999985 00 03678887762222 356777788888777654432 236889999
Q ss_pred eccCCCCcc---------HH-HHHHHHHHhhCCCCc-eEEEeCcHHHHHHh---------------hc-C----------
Q 026689 101 AVSGVNHPT---------DQ-QRILNWLRDIFPGNV-RLYVHNDALAALAS---------------GT-M---------- 143 (235)
Q Consensus 101 gi~G~~~~~---------~~-~~l~~~l~~~~~~~~-~v~v~NDa~~a~~~---------------~~-~---------- 143 (235)
|+||+.++. .+ .++.+.+++.|+ . ||.++||+++++++ +. .
T Consensus 96 ~~pG~vd~g~v~~~~~~~~~~~~l~~~l~~~~~--~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~ 173 (373)
T 2q2r_A 96 NVPGPVTGGAVGGPFNNLKGIARLSDYPKALFP--PGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQE 173 (373)
T ss_dssp EESSCEETTTEECCCSSSBSCEEGGGSCTTTSC--TTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSS
T ss_pred EeeccccCCEEeccCCCCCCcCCHHHHHHHhcC--CCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccC
Confidence 999995431 12 267777777787 5 99999999999988 33 2
Q ss_pred --C----CCCEEEEEeCCCceeEEEecCCcEE-----EeCCCCccccccc
Q 026689 144 --G----KLHGCVLIAGTGTIAYGFTEDGRDA-----RAAGAGPILGDWG 182 (235)
Q Consensus 144 --g----~~~gi~li~GTGs~~~g~~~~G~~~-----~~Gg~G~llgd~g 182 (235)
+ .++.++|++|||++ .+++.+|+++ .+|||||+..+..
T Consensus 174 ~~g~~~~~~~~~~v~~GTGiG-~gii~~g~l~~G~~~~aGE~Gh~~~~~~ 222 (373)
T 2q2r_A 174 PAGSVIGRGRCLVLAPGTGLG-SSLIYYNPPMNQHIVVPLELGSQTLPMR 222 (373)
T ss_dssp CTTSSCCSSCEEEEEESSSEE-EEEEEECC---CEEEEEECGGGSBCCCS
T ss_pred CCcCcCCCCCEEEEEeCCcee-EEEEecCcccCCCcccccccceeecCCC
Confidence 2 36899999999995 5777777654 5899999887643
No 26
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.65 E-value=2.2e-16 Score=143.30 Aligned_cols=144 Identities=17% Similarity=0.132 Sum_probs=106.9
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHH---HHHHHHHHHHcCCCcccceee
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETI---EKVMADALLKSGSNRSAVRAV 98 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i---~~~i~~~l~~~~~~~~~i~~i 98 (235)
+++|+||+|+|+++++++|. + +++.+.+.++......+++++++.+ .+.+.+++.+.+....+|.+|
T Consensus 2 ~~vlgidiGgt~ik~al~d~---------~-~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI 71 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFED---------E-RMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF 71 (381)
T ss_dssp CEEEEEEECSSEEEEEEEET---------T-EEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE
T ss_pred CeEEEEECCccceeEEEEec---------c-hheeeeecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE
Confidence 37999999999999999998 6 8888877654211000222344455 777778887777666789999
Q ss_pred EEeccCCCCcc---H-----------------------HHHHHHHHHhhCCCCceEEEeCcHH---------HHHH----
Q 026689 99 CLAVSGVNHPT---D-----------------------QQRILNWLRDIFPGNVRLYVHNDAL---------AALA---- 139 (235)
Q Consensus 99 gigi~G~~~~~---~-----------------------~~~l~~~l~~~~~~~~~v~v~NDa~---------~a~~---- 139 (235)
+++||+.++. . ..++.+.|++.|+ .||+|+||++ ++++
T Consensus 72 -i~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~--~Pv~v~NDan~~~~~~~a~aaalp~~~ 148 (381)
T 1saz_A 72 -VSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETG--VPAYVVDPVVVDEMEDVARVSGHPNYQ 148 (381)
T ss_dssp -EEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHC--CCEEEESCTTBCCCCGGGTBCSSTTCB
T ss_pred -EecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcC--CCEEEeCCCccccCcHHHHHcCCcchh
Confidence 9999986432 1 3577888888887 8999999999 7666
Q ss_pred -------------hh-c-----CCCC--CEEEEEeCCCceeEEEecCCcEEE-----eCCCCccccc
Q 026689 140 -------------SG-T-----MGKL--HGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGD 180 (235)
Q Consensus 140 -------------~~-~-----~g~~--~gi~li~GTGs~~~g~~~~G~~~~-----~Gg~G~llgd 180 (235)
++ . ++.+ +.+++.+|||++ .+++.||++++ +|+ ||+..+
T Consensus 149 r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG-~g~i~~G~~~~G~~g~agE-Gh~~~~ 213 (381)
T 1saz_A 149 RKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGIS-IAAHRKGRVIDVNNALDGD-GPFTPE 213 (381)
T ss_dssp CCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEE-EEEEETTEEEEECCGGGTC-SSCCSS
T ss_pred hhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcE-EEEEECCEEEEecCCCCCC-cceeec
Confidence 55 2 3345 899999999995 56778999875 578 998765
No 27
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.63 E-value=3.9e-15 Score=148.48 Aligned_cols=163 Identities=16% Similarity=0.115 Sum_probs=114.9
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCC----E-EEEEEeCCCCC-ccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLP----V-LARAAAGCSNH-NSVGEDAARETIEKVMADALLKSGSNRSAV 95 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~----i-l~~~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (235)
..+|+||+|||++|+++++. +|+ + +.+.+.+.+.. ...+.+++++.|.+.+++++++.+...+.
T Consensus 78 G~~laiDlGGTnirv~lv~~---------~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~~~~- 147 (917)
T 1cza_N 78 GDFIALDLGGSSFRILRVQV---------NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIKDKK- 147 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEE---------EEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCTTSC-
T ss_pred ceEEEEEeCCCeEEEEEEEe---------cCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCCCCc-
Confidence 47899999999999999998 554 4 45555443211 12467899999999999998876553322
Q ss_pred eeeEEeccCCCCc---c---------H-------HHHHHHHHHhhC------CCCceEEEeCcHHHHHHhhc-CCCCCEE
Q 026689 96 RAVCLAVSGVNHP---T---------D-------QQRILNWLRDIF------PGNVRLYVHNDALAALASGT-MGKLHGC 149 (235)
Q Consensus 96 ~~igigi~G~~~~---~---------~-------~~~l~~~l~~~~------~~~~~v~v~NDa~~a~~~~~-~g~~~gi 149 (235)
..+||++|++.+. . . +.++.+.|++.+ |. .||.|.||+++++++++ .+.++.+
T Consensus 148 ~~lGi~fs~P~~q~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv-~~val~NDa~~tll~e~~~~~~~~i 226 (917)
T 1cza_N 148 LPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDA-NIVAVVNDTVGTMMTCGYDDQHCEV 226 (917)
T ss_dssp CCEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCC-CEEEEECHHHHHHHHHHHHCTTEEE
T ss_pred ccEEEEEccccccCcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCc-eEEEEEEhhHHHHHHhhccCCCcEE
Confidence 2566677776431 1 0 235555555544 32 57999999999999874 5667899
Q ss_pred EEEeCCCceeEEEecCCc-----------EEEeCCCCccc----------------------------cccchHHHHHHH
Q 026689 150 VLIAGTGTIAYGFTEDGR-----------DARAAGAGPIL----------------------------GDWGSGYGIAAQ 190 (235)
Q Consensus 150 ~li~GTGs~~~g~~~~G~-----------~~~~Gg~G~ll----------------------------gd~gSg~~ig~~ 190 (235)
.+++|||+++ +++.+++ ....+||||+- ....||.+|++.
T Consensus 227 glilGTGvng-g~i~~g~~i~~~~G~~g~~~in~E~G~f~~~~~l~~~~t~~D~~~dc~~g~pg~g~~Ek~~SG~yLgel 305 (917)
T 1cza_N 227 GLIIGTGTNA-CYMEELRHIDLVEGDEGRMCINTEWGAFGDDGSLEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGEL 305 (917)
T ss_dssp EEEESSSEEE-EEEEEGGGCTTSSCCSSEEEEECCGGGTTTTTTTTTTCCHHHHHHHHTSSSTTSSTTHHHHSHHHHHHH
T ss_pred EEEEECCcce-EEEecCcccccccCCCCceEEeccccccCCccccccCCCccccccccCCcCCCccHhHHHhhhhhHHHH
Confidence 9999999975 5667766 66789999961 013578999987
Q ss_pred HHHHHH
Q 026689 191 ALTAVI 196 (235)
Q Consensus 191 al~~~~ 196 (235)
+.....
T Consensus 306 ~r~~l~ 311 (917)
T 1cza_N 306 VRLILV 311 (917)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
No 28
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.62 E-value=4.7e-15 Score=137.55 Aligned_cols=165 Identities=8% Similarity=-0.013 Sum_probs=115.6
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCE---EEEEEeCCCCC-ccCCHHHHHHHHHHHHHHHHHHcCCCcccc--
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNH-NSVGEDAARETIEKVMADALLKSGSNRSAV-- 95 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~i---l~~~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i-- 95 (235)
..+|+||+|||++|+++++. +|++ +.+.+.+.+.. ...+.+++++.|.+.+++++.+.+....+.
T Consensus 61 G~~laiDlGGTnirv~lV~~---------~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~ 131 (457)
T 2yhx_A 61 GSFLAIVMGGGDLEVILISL---------AGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSXAGSVP 131 (457)
T ss_dssp EEEEEEEECSSEEEEEEEEE---------ETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCEE
T ss_pred ceEEEEEeCCCeEEEEEEEe---------CCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 47899999999999999998 7887 44444433211 123678999999999999988754322223
Q ss_pred eeeEEeccCC-CCcc------H--HH------HHHHHHHhhC---CCCce---EEEeCcHHHHHHhhc-CCCCCEEEEEe
Q 026689 96 RAVCLAVSGV-NHPT------D--QQ------RILNWLRDIF---PGNVR---LYVHNDALAALASGT-MGKLHGCVLIA 153 (235)
Q Consensus 96 ~~igigi~G~-~~~~------~--~~------~l~~~l~~~~---~~~~~---v~v~NDa~~a~~~~~-~g~~~gi~li~ 153 (235)
.+++++.|+. .+.. + .+ ++.+.|++.+ + .| |.|.||+++++++++ .+.++.+.+++
T Consensus 132 lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~g--lpv~vval~NDa~~tll~e~~~~~~~~iglil 209 (457)
T 2yhx_A 132 LGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAG--DXXXSVADIXDSHGILXXVNYTDAXIKMGIIF 209 (457)
T ss_dssp EEEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHHCTTEEEEEEE
T ss_pred eeeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcC--CcceeEEEEecchhhccchhhcCCccEEEEEE
Confidence 4554444444 1111 1 12 6777777766 4 46 999999999999874 56678999999
Q ss_pred CCCceeEEEecCC----------------cEEEeCCCCcccc--------------c------------cchHHHHHHHH
Q 026689 154 GTGTIAYGFTEDG----------------RDARAAGAGPILG--------------D------------WGSGYGIAAQA 191 (235)
Q Consensus 154 GTGs~~~g~~~~G----------------~~~~~Gg~G~llg--------------d------------~gSg~~ig~~a 191 (235)
|||+++ +++.++ +....+||||+-. | ..||.+||+.+
T Consensus 210 GTGvgg-~~i~~~~~i~kl~~~~~~~~~g~~~in~EwG~f~~~~~~lp~t~~D~~lD~~s~~pGq~fEkm~SG~yLGel~ 288 (457)
T 2yhx_A 210 GSGVNA-AYWCDSTXIGDAADGGXXGGAGXMXICCDQSSFRKAFPSLPQIXYLXTLNXXSPXAXKTFXKNSXAKNXGQSL 288 (457)
T ss_dssp SSSEEE-EEEECGGGSSCTTSCSSSCSSCCEEEECCCTTTTTTCSSSCCCHHHHHHHHHSSCSCCHHHHHHCGGGHHHHH
T ss_pred CcEEEE-EEEECCCcccccccccccccCCceEEEEEcccCCCCCCcCCccccccccccccCchHHHHHHHhhhcCcHHHH
Confidence 999975 565554 3556899999731 2 25789999887
Q ss_pred HHHHHHH
Q 026689 192 LTAVIRA 198 (235)
Q Consensus 192 l~~~~~~ 198 (235)
+..+.+.
T Consensus 289 R~il~~~ 295 (457)
T 2yhx_A 289 RDVLMXF 295 (457)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776653
No 29
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.61 E-value=1.7e-14 Score=133.60 Aligned_cols=162 Identities=19% Similarity=0.124 Sum_probs=116.2
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCC-C----E-EEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPL-P----V-LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g-~----i-l~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (235)
..+|+||+|||++|+++++. +| + + ..+.+.+ .+....+.+++++.|.+.+++++.+.+... +.
T Consensus 68 G~~lalDlGGTn~Rv~~V~l---------~G~~~~~~i~~~~~~ip-~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~-~~ 136 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTL---------EGKGKSPRIQERTYCIP-AEKMSGSGTELFKYIAETLADFLENNGMKD-KK 136 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEE---------CC-CCCCEEEEEEECCC-TTTTTSBHHHHHHHHHHHHHHHHHHTTCCS-SC
T ss_pred ceEEEEEeCCCeEEEEEEec---------CCCCcceEEEEEEEecC-CcccCCCHHHHHHHHHHHHHHHHHhcCCCc-cc
Confidence 47899999999999999998 56 4 3 3233333 332335679999999999999998877544 33
Q ss_pred eeeEEeccCCCCc---c------H----------HHHHHHHHHhhC---CCCceE---EEeCcHHHHHHhhc-CCCCCEE
Q 026689 96 RAVCLAVSGVNHP---T------D----------QQRILNWLRDIF---PGNVRL---YVHNDALAALASGT-MGKLHGC 149 (235)
Q Consensus 96 ~~igigi~G~~~~---~------~----------~~~l~~~l~~~~---~~~~~v---~v~NDa~~a~~~~~-~g~~~gi 149 (235)
..+|+++|++.+. . + +.++.+.|++.+ + .|| .+.||+++++++++ .+.+..+
T Consensus 137 ~~lG~tfsfPv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~--l~v~v~al~NDtv~tlla~~y~~~~~~i 214 (451)
T 1bdg_A 137 FDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRE--LNVKCVAVVNDTVGTLASCALEDPKCAV 214 (451)
T ss_dssp EEEEEEECSCEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTT--CCEEEEEEECHHHHHHHHHHTTCTTEEE
T ss_pred cceEEEEeeEeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHHHHcC--CCcceEEEEEchHHHHHHhcccCCCcEE
Confidence 6799999999653 1 1 235566666555 4 455 99999999988764 5566789
Q ss_pred EEEeCCCceeEEEecCC------------cEEEeCCCCccc--------------------c--------ccchHHHHHH
Q 026689 150 VLIAGTGTIAYGFTEDG------------RDARAAGAGPIL--------------------G--------DWGSGYGIAA 189 (235)
Q Consensus 150 ~li~GTGs~~~g~~~~G------------~~~~~Gg~G~ll--------------------g--------d~gSg~~ig~ 189 (235)
.+|+|||+++ +++.++ +.....+||++- + -..||.+||+
T Consensus 215 glIlGTG~na-~yve~~~~i~~~~g~~~g~m~In~EwG~f~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~yLge 293 (451)
T 1bdg_A 215 GLIVGTGTNV-AYIEDSSKVELMDGVKEPEVVINTEWGAFGEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGE 293 (451)
T ss_dssp EEEESSSEEE-EEEEETTTCGGGCSCSSSEEEEECCGGGTTTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHHHHH
T ss_pred EEEEeCCcce-EEEEcCccccCcCCCccCcEEEecCcccCCCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhHHHH
Confidence 9999999976 565654 345678999861 1 1257999888
Q ss_pred HHHHHHHH
Q 026689 190 QALTAVIR 197 (235)
Q Consensus 190 ~al~~~~~ 197 (235)
.++..+.+
T Consensus 294 l~R~~l~~ 301 (451)
T 1bdg_A 294 LVRHIIVY 301 (451)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87776544
No 30
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.36 E-value=4.6e-12 Score=126.38 Aligned_cols=165 Identities=17% Similarity=0.090 Sum_probs=113.4
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCC--EEEEEE--eC-CCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccce
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLP--VLARAA--AG-CSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~--il~~~~--~~-~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (235)
..+|+||+|||++|+++++.. .++ ++...+ .. +......+.+++++.|.+.+.+++++.+...+++
T Consensus 526 G~~lalDlGGTn~Rv~~V~l~--------~g~~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~~l- 596 (917)
T 1cza_N 526 GDFLALDLGGTNFRVLLVKIR--------SGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGPRM- 596 (917)
T ss_dssp EEEEEEEESSSSEEEEEEEEE--------CSTTCEEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCCSSCC-
T ss_pred eEEEEEEECCCcEEEEEEEeC--------CCcceeEEeeeeEEecCcccccCCHHHHHHHHHHHHHHHHHHcCCCccce-
Confidence 478999999999999999982 143 552211 11 2221123568899999999999998876654445
Q ss_pred eeEEeccCCCCcc---------H----------HHH----HHHHHHhh--CCCCceEEEeCcHHHHHHhh-cCCCCCEEE
Q 026689 97 AVCLAVSGVNHPT---------D----------QQR----ILNWLRDI--FPGNVRLYVHNDALAALASG-TMGKLHGCV 150 (235)
Q Consensus 97 ~igigi~G~~~~~---------~----------~~~----l~~~l~~~--~~~~~~v~v~NDa~~a~~~~-~~g~~~gi~ 150 (235)
.+||++|++.+.. + ..+ |++.+.++ ++. .+|.|.||++++++++ +.+.+..+.
T Consensus 597 ~lG~tfsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v-~~val~NDtv~tlla~~y~~~~~~ig 675 (917)
T 1cza_N 597 PLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDL-DVVAVVNDTVGTMMTCAYEEPTCEVG 675 (917)
T ss_dssp EEEEEECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCC-EEEEEECHHHHHHHHHHTTCTTEEEE
T ss_pred eEEEEeeccccccccCccEECceecccccCCcCCCcHHHHHHHHHHhcCCCCc-eEEEEEEccHHHHHHhccCCCCcEEE
Confidence 7899999996421 1 233 44444432 232 4899999999998876 456667899
Q ss_pred EEeCCCceeEEEecCCc-----------EEEeCCCCccccc-----------------------------cchHHHHHHH
Q 026689 151 LIAGTGTIAYGFTEDGR-----------DARAAGAGPILGD-----------------------------WGSGYGIAAQ 190 (235)
Q Consensus 151 li~GTGs~~~g~~~~G~-----------~~~~Gg~G~llgd-----------------------------~gSg~~ig~~ 190 (235)
+|+|||+++ +++.+++ .....+||+. |+ ..||.+||+.
T Consensus 676 lIlGTG~na-~y~e~~~~i~~~~g~~g~m~In~EwG~f-g~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG~yLgel 753 (917)
T 1cza_N 676 LIVGTGSNA-CYMEEMKNVEMVEGDQGQMCINMEWGAF-GDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEI 753 (917)
T ss_dssp EEESSSEEE-EEEEETTTCTTSSCCSSEEEEECCGGGT-TTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTSTTTHHHH
T ss_pred EEEeCCeeE-EEEEcCccccCcCCCcCcEEEecccccC-CCcccccCCCCchhhhhhhcCCCCCCCchHHhhhHhHHHHH
Confidence 999999976 4656653 4455677753 33 3689999988
Q ss_pred HHHHHHHH
Q 026689 191 ALTAVIRA 198 (235)
Q Consensus 191 al~~~~~~ 198 (235)
++..+.+.
T Consensus 754 ~R~il~~~ 761 (917)
T 1cza_N 754 VRNILIDF 761 (917)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 87766543
No 31
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.16 E-value=3.1e-10 Score=105.72 Aligned_cols=132 Identities=13% Similarity=0.026 Sum_probs=88.1
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCC----EEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCc-ccce
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLP----VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNR-SAVR 96 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~----il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~-~~i~ 96 (235)
..+|++|+|||+.|+++++. +|+ +..+...-+.+......+++++.|.+.+.+++.+..... .+..
T Consensus 80 G~~LalDlGGTn~Rv~~V~l---------~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~~~~l 150 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKL---------GGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDEWYPDGVSEPL 150 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEE---------ESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHHHCTTCCSSCE
T ss_pred eEEEEEEecCCeEEEEEEEE---------CCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 47999999999999999998 443 222222222333223478999999999999998865432 3455
Q ss_pred eeEEeccCCCCcc---------H----------HHHHHHHHHhhC---CCC-ceEEEeCcHHHHHHhhc-CCCCCEEEEE
Q 026689 97 AVCLAVSGVNHPT---------D----------QQRILNWLRDIF---PGN-VRLYVHNDALAALASGT-MGKLHGCVLI 152 (235)
Q Consensus 97 ~igigi~G~~~~~---------~----------~~~l~~~l~~~~---~~~-~~v~v~NDa~~a~~~~~-~g~~~gi~li 152 (235)
.+|+++|.+.+.+ + +.++.+.|++.+ +.+ ..+.|.||+.++++++. .+.+..+.+|
T Consensus 151 ~lGftfSfP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglI 230 (485)
T 3o8m_A 151 PLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGII 230 (485)
T ss_dssp EEEEEECSCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEE
T ss_pred ceEEEEeeeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEE
Confidence 6788888884321 0 133444444443 311 23789999999988763 4556788999
Q ss_pred eCCCceeEEE
Q 026689 153 AGTGTIAYGF 162 (235)
Q Consensus 153 ~GTGs~~~g~ 162 (235)
+|||++++.+
T Consensus 231 lGTG~N~~y~ 240 (485)
T 3o8m_A 231 IGTGVNGAYY 240 (485)
T ss_dssp ESSSEEEEEE
T ss_pred EecCcceEEE
Confidence 9999987544
No 32
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=99.03 E-value=1.1e-09 Score=102.93 Aligned_cols=80 Identities=20% Similarity=0.175 Sum_probs=68.9
Q ss_pred cccCCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcC
Q 026689 16 EESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSG 89 (235)
Q Consensus 16 ~~~~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~ 89 (235)
+.++|++|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+++|+++|+.+.+++++++++.+
T Consensus 20 ~~~MM~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 90 (520)
T 4e1j_A 20 FQSMMGGYILAIDQGTTSTRAIVFDG---------NQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSG 90 (520)
T ss_dssp CCCCCSCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHhhCeEEEEEeCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcC
Confidence 44455679999999999999999999 9999998765432 33578999999999999999999888
Q ss_pred CCcccceeeEEeccC
Q 026689 90 SNRSAVRAVCLAVSG 104 (235)
Q Consensus 90 ~~~~~i~~igigi~G 104 (235)
+++.+|.+|+++.+|
T Consensus 91 ~~~~~I~~Igis~~g 105 (520)
T 4e1j_A 91 ITANDIAAIGITNQR 105 (520)
T ss_dssp CCGGGEEEEEEEECS
T ss_pred CCcccEEEEEEeCCc
Confidence 888899999999888
No 33
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=98.93 E-value=4.3e-09 Score=98.18 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=66.5
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (235)
||+|+||||+|||++|++++|. +|+++.+.+.+.. .+.+++++++|+.+.+++++++++.++++.
T Consensus 1 M~~~~lgiDiGtt~~k~~l~d~---------~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~ 71 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIFDR---------ESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPN 71 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred CCcEEEEEecCCchhEEEEECC---------CCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 5669999999999999999998 8999998876543 234789999999999999999998888778
Q ss_pred cceeeEEeccC
Q 026689 94 AVRAVCLAVSG 104 (235)
Q Consensus 94 ~i~~igigi~G 104 (235)
+|.+|+++.+|
T Consensus 72 ~i~~Igis~~~ 82 (497)
T 2zf5_O 72 QIAAIGVTNQR 82 (497)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEecCC
Confidence 89999998887
No 34
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=98.92 E-value=7.1e-08 Score=88.78 Aligned_cols=145 Identities=17% Similarity=0.082 Sum_probs=93.0
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEE-EeC-CCCCccCCHHHHHHHHHHHHHHHHHHcCCCccc-ceee
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAG-CSNHNSVGEDAARETIEKVMADALLKSGSNRSA-VRAV 98 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~-~~~-~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~-i~~i 98 (235)
..+|++|.|||+.|+++++. .+.+--.. ... +........+++++.|.+.+.+++++.+..... ..++
T Consensus 59 G~~LAlDlGGTn~RV~~V~l---------~g~~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~~~~lplGf 129 (445)
T 3hm8_A 59 GDFLALDLGGTNFRVLLVRV---------TTGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQSLPLGF 129 (445)
T ss_dssp EEEEEEEESSSSEEEEEEEE---------SSSEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCTTCCCCEEE
T ss_pred eEEEEEEecCCeEEEEEEEE---------CCceEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCcccccCcceE
Confidence 47899999999999999998 45432211 111 111111246789999999999999876543221 2355
Q ss_pred EEeccCCCCc-c------H--------------HHHHHHHHHhh--CCCCceEEEeCcHHHHHHhh-cCCCCCEEEEEeC
Q 026689 99 CLAVSGVNHP-T------D--------------QQRILNWLRDI--FPGNVRLYVHNDALAALASG-TMGKLHGCVLIAG 154 (235)
Q Consensus 99 gigi~G~~~~-~------~--------------~~~l~~~l~~~--~~~~~~v~v~NDa~~a~~~~-~~g~~~gi~li~G 154 (235)
.+++|.-... . + ...|++.+.++ ++. ..+.+.||+.+++++. +.+.+..+.+|+|
T Consensus 130 tFSFP~~Q~sl~~g~Li~wtKGF~~~~~~G~dv~~lL~~al~r~~~~~v-~vvAivNDTvgTLla~~y~~~~~~iglIlG 208 (445)
T 3hm8_A 130 TFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVEL-NVVAIVNDTVGTMMSCGYEDPRCEIGLIVG 208 (445)
T ss_dssp EECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCC-CSEEEECHHHHHHHHHHTTCTTEEEEEEES
T ss_pred EEeeeeEeccCCceEEEEeeccccCCCCCCCcHHHHHHHHHHhcCCCCc-ceEEEecCcHHHHHhhccCCCCceEEEEEe
Confidence 5555543221 0 0 24567777664 443 4589999999998875 4455667899999
Q ss_pred CCceeEEEec-----------CCcEEEeCCCCcc
Q 026689 155 TGTIAYGFTE-----------DGRDARAAGAGPI 177 (235)
Q Consensus 155 TGs~~~g~~~-----------~G~~~~~Gg~G~l 177 (235)
||++++ +.. .++...--|||.+
T Consensus 209 TGtNa~-y~e~~~~i~k~~~~~~~miINtEwG~F 241 (445)
T 3hm8_A 209 TGTNAC-YMEELRNVAGVPGDSGRMCINMEWGAF 241 (445)
T ss_dssp SSEEEE-EEEEGGGCTTSCCCSSEEEEECCGGGT
T ss_pred CCceEE-EEEecccccccCCCCCcEEEEcchhhc
Confidence 999875 432 2445566677763
No 35
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=98.92 E-value=4.5e-09 Score=98.17 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=65.8
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (235)
|++|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+++++++|+.++++++++++++++++.
T Consensus 4 M~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~ 74 (501)
T 3g25_A 4 MEKYILSIDQGTTSSRAILFNQ---------KGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRAD 74 (501)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGG
T ss_pred cccEEEEEEeCccceEEEEEcC---------CCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 5669999999999999999999 9999998876532 335789999999999999999998888888
Q ss_pred cceeeEEeccC
Q 026689 94 AVRAVCLAVSG 104 (235)
Q Consensus 94 ~i~~igigi~G 104 (235)
+|.+|+++..+
T Consensus 75 ~I~~Igis~~~ 85 (501)
T 3g25_A 75 QIAGIGITNQR 85 (501)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEECCc
Confidence 99999887653
No 36
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.92 E-value=4.4e-09 Score=98.83 Aligned_cols=74 Identities=16% Similarity=0.204 Sum_probs=64.1
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeC------CCCCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG------CSNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~------~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (235)
++|+||||+|+|++|++|+|. +|++++..+.+ ...+.||+|+++|+.++++++++++++++++++
T Consensus 3 kkYvlgID~GTss~Ka~l~d~---------~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEcC---------CCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 469999999999999999999 99999987654 234568999999999999999999999999999
Q ss_pred ceeeEEecc
Q 026689 95 VRAVCLAVS 103 (235)
Q Consensus 95 i~~igigi~ 103 (235)
|.+|+|.--
T Consensus 74 I~aIgis~q 82 (526)
T 3ezw_A 74 IAAIGITNQ 82 (526)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeCC
Confidence 999766433
No 37
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.90 E-value=3.4e-09 Score=99.25 Aligned_cols=76 Identities=22% Similarity=0.269 Sum_probs=65.8
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (235)
+++|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+++|+++|+.+.+++++++++.++++.
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~ 75 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVRL---------PDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAGESDW 75 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred cCCEEEEEEecCcceEEEEECC---------CCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcCCChh
Confidence 3569999999999999999998 9999998876532 335789999999999999999988887778
Q ss_pred cceeeEEeccC
Q 026689 94 AVRAVCLAVSG 104 (235)
Q Consensus 94 ~i~~igigi~G 104 (235)
+|.+|+++.+|
T Consensus 76 ~I~~Igis~~~ 86 (508)
T 3ifr_A 76 RPGGICVTGML 86 (508)
T ss_dssp CEEEEEEEECS
T ss_pred heEEEEEECCC
Confidence 99999999888
No 38
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.85 E-value=1.1e-08 Score=95.86 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=65.8
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (235)
|+|+||||+|+|++|++|+|. +|+++++.+.+.. .+.+++|+++|+.+.+++++++++.++++.+
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~ 72 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQ 72 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CcEEEEEEcCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 348999999999999999999 9999998876532 3357999999999999999999998888889
Q ss_pred ceeeEEeccC
Q 026689 95 VRAVCLAVSG 104 (235)
Q Consensus 95 i~~igigi~G 104 (235)
|.+|+++.++
T Consensus 73 I~~Igis~~~ 82 (510)
T 2p3r_A 73 IAAIGITNQR 82 (510)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEeCCc
Confidence 9999988876
No 39
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.85 E-value=1.1e-08 Score=95.99 Aligned_cols=75 Identities=13% Similarity=0.039 Sum_probs=64.3
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcc
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (235)
||+|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+++|+++|+.+.+++++++ +.++++.
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~ 72 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADR---------DGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDAR 72 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGG
T ss_pred cccEEEEEEeCCCceEEEEECC---------CCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChh
Confidence 5679999999999999999999 9999998866432 3457899999999999999999 7777778
Q ss_pred cceeeEEeccC
Q 026689 94 AVRAVCLAVSG 104 (235)
Q Consensus 94 ~i~~igigi~G 104 (235)
+|.+|+++..+
T Consensus 73 ~I~~Igis~q~ 83 (511)
T 3hz6_A 73 RVSAIVLSGQM 83 (511)
T ss_dssp GEEEEEEEECC
T ss_pred HeEEEEEeccc
Confidence 89998877654
No 40
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=98.85 E-value=8.1e-09 Score=96.45 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=64.1
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHc--CCC
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKS--GSN 91 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~--~~~ 91 (235)
||+|+||||+|||++|++++|. +|+++.+.+.+.. .+.+++++++|+.+.+++++++++. +++
T Consensus 2 ~m~~~lgIDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~ 72 (503)
T 2w40_A 2 SMNVILSIDQSTQSTKVFFYDE---------ELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT 72 (503)
T ss_dssp -CEEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CccEEEEEEeCCcceEEEEECC---------CCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 4568999999999999999999 8999998876543 2346899999999999999998876 566
Q ss_pred cccceeeEEeccC
Q 026689 92 RSAVRAVCLAVSG 104 (235)
Q Consensus 92 ~~~i~~igigi~G 104 (235)
+.+|.+|+++.+|
T Consensus 73 ~~~i~~Igis~~~ 85 (503)
T 2w40_A 73 SVIIKCIGITNQR 85 (503)
T ss_dssp SCEEEEEEEEECS
T ss_pred ccceEEEEEcCCc
Confidence 6689999998885
No 41
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.81 E-value=1.9e-08 Score=94.16 Aligned_cols=75 Identities=16% Similarity=0.265 Sum_probs=65.0
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (235)
++|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+++|+++|+.++++++++++++++++.+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR---------NGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEA 74 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CCEEEEEEcCCCceEEEEECC---------CCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 459999999999999999999 9999998766532 3457999999999999999999998888889
Q ss_pred ceeeEEeccC
Q 026689 95 VRAVCLAVSG 104 (235)
Q Consensus 95 i~~igigi~G 104 (235)
|.+|+++..+
T Consensus 75 I~~Igis~~~ 84 (506)
T 3h3n_X 75 IAGIGITNQR 84 (506)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEeeCCc
Confidence 9999887664
No 42
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=98.80 E-value=1.7e-08 Score=94.06 Aligned_cols=74 Identities=22% Similarity=0.166 Sum_probs=64.1
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (235)
+|+||||+|||++|++++|. +|+++.+.+.+.. .+.+++++++|+.+.+++++++++.++++.+|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL---------EGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEV 72 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred cEEEEEeeCCcceEEEEECC---------CCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 48999999999999999999 8999998876542 23468999999999999999999888777889
Q ss_pred eeeEEeccC
Q 026689 96 RAVCLAVSG 104 (235)
Q Consensus 96 ~~igigi~G 104 (235)
.+|+|+.+|
T Consensus 73 ~~Igis~~~ 81 (495)
T 2dpn_A 73 LALGITNQR 81 (495)
T ss_dssp CEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999998886
No 43
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=98.74 E-value=3e-08 Score=93.74 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=62.6
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCC------CCCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC------SNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (235)
|+|+||||+|+|++|++|+|. +|+++++.+.+. ..+.+++++++|+.+.+++++++++.++.+.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~---------~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL---------QGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQ 74 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CcEEEEEEECcccEEEEEECC---------CCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhH
Confidence 459999999999999999998 999999886653 23457999999999999999999988888888
Q ss_pred ceeeEEe
Q 026689 95 VRAVCLA 101 (235)
Q Consensus 95 i~~igig 101 (235)
|.+|+++
T Consensus 75 I~~Igis 81 (554)
T 3l0q_A 75 VKGLGFD 81 (554)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9998764
No 44
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=98.73 E-value=5.7e-07 Score=83.35 Aligned_cols=167 Identities=17% Similarity=0.086 Sum_probs=105.8
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCC---CEEEEEE--eC-CCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPL---PVLARAA--AG-CSNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g---~il~~~~--~~-~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (235)
..||++|.|||+.|++++...+ ++ ..+...+ .+ +........+++++-|.+.+.+++.+.+... +.
T Consensus 77 G~fLAlDlGGTNfRV~~V~L~g-------~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~~-~~ 148 (470)
T 3f9m_A 77 GDFLSLDLGGTNFRVMLVKVGE-------GEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKH-KK 148 (470)
T ss_dssp EEEEEEEESSSEEEEEEEEEEC-----------CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCSS-SC
T ss_pred eEEEEEEecCceEEEEEEEECC-------CCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhccccc-cc
Confidence 3789999999999999999832 22 1222111 11 1111123468899999999999998876543 22
Q ss_pred eeeEEeccCCCCcc-----------------------HHHHHHHHHHhh--CCCCceEEEeCcHHHHHHhh-cCCCCCEE
Q 026689 96 RAVCLAVSGVNHPT-----------------------DQQRILNWLRDI--FPGNVRLYVHNDALAALASG-TMGKLHGC 149 (235)
Q Consensus 96 ~~igigi~G~~~~~-----------------------~~~~l~~~l~~~--~~~~~~v~v~NDa~~a~~~~-~~g~~~gi 149 (235)
.-+|+.+|=|...+ -...|++.++++ ++. ..+.+.||....+++. +...+.-+
T Consensus 149 lpLGfTFSFP~~Q~sl~~g~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v-~v~AlvNDTVgTL~s~aY~~~~~~i 227 (470)
T 3f9m_A 149 LPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEM-DVVAMVNDTVATMISCYYEDHQCEV 227 (470)
T ss_dssp CEEEEEECSCEEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCC-EEEEEECHHHHHHHHHHTTCTTEEE
T ss_pred cceEEEEeccccccCCCceEEEeccccccCCCcCCccHHHHHHHHHHhcCCCCC-cEEEEEEcCHHHHHhcccCCCCceE
Confidence 33455555443211 034677888776 343 5689999999888765 34444577
Q ss_pred EEEeCCCceeEEEec----------CCcEEEeCCCCccccc-----------------------------cchHHHHHHH
Q 026689 150 VLIAGTGTIAYGFTE----------DGRDARAAGAGPILGD-----------------------------WGSGYGIAAQ 190 (235)
Q Consensus 150 ~li~GTGs~~~g~~~----------~G~~~~~Gg~G~llgd-----------------------------~gSg~~ig~~ 190 (235)
-+|+|||++++.+-. .++.+.--|||-+ ++ --||.|+|.-
T Consensus 228 GlI~GTGtNa~Y~E~~~~I~k~~~~~~~miINtEwG~F-g~~~~l~~~~T~~D~~lD~~S~nPG~Q~fEKmiSG~YLGEi 306 (470)
T 3f9m_A 228 GMIVGTGCNACYMEEMQNVELVEGDEGRMCVNTEWGAF-GDSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGEL 306 (470)
T ss_dssp EEEESSSEEEEEEEEGGGCTTSSCCSSEEEEECCGGGT-TTTSTTGGGCCHHHHHHHHHSSSTTSCHHHHTTCHHHHHHH
T ss_pred EEEEecCCceEEeeeccccccccCCCCcEEEeechhhc-CCCcccCCCCCcccHHHhhcCCCCCceeeccccchhhHHHH
Confidence 899999999764421 2455666677763 32 1479999876
Q ss_pred HHHHHHHH
Q 026689 191 ALTAVIRA 198 (235)
Q Consensus 191 al~~~~~~ 198 (235)
.+..+++.
T Consensus 307 vRliL~~l 314 (470)
T 3f9m_A 307 VRLVLLRL 314 (470)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 45
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=98.71 E-value=6.1e-08 Score=90.57 Aligned_cols=74 Identities=16% Similarity=0.213 Sum_probs=64.8
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (235)
+|+||||+|+|++|++++|. +|+++.+.+.+.. .+.+++++++|+.+.+++++++++.++.+.+|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~---------~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH---------SGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDI 72 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CEEEEEecCCcceEEEEECC---------CCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccE
Confidence 38999999999999999999 8999998876543 23468999999999999999999888777789
Q ss_pred eeeEEeccC
Q 026689 96 RAVCLAVSG 104 (235)
Q Consensus 96 ~~igigi~G 104 (235)
.+|+|+.+|
T Consensus 73 ~~Igis~~g 81 (504)
T 2d4w_A 73 AAVGITNQR 81 (504)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999987
No 46
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.69 E-value=6.8e-08 Score=90.31 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=60.8
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCC------CCCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC------SNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (235)
|+|+||||+|+|++|++++|. +|+++.+.+.+. ..+.+++|+++|+.+++++++++++.+ .+
T Consensus 3 m~~~lgIDiGtts~K~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~ 70 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDI---------NGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GK 70 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SE
T ss_pred CCEEEEEEecCCceEEEEEcC---------CCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CC
Confidence 469999999999999999999 999999887643 234579999999999999999998765 47
Q ss_pred ceeeEEeccCC
Q 026689 95 VRAVCLAVSGV 105 (235)
Q Consensus 95 i~~igigi~G~ 105 (235)
|.+|+++..+.
T Consensus 71 I~~Igis~q~~ 81 (504)
T 3ll3_A 71 IAAISWSSQMH 81 (504)
T ss_dssp EEEEEEEECSS
T ss_pred eEEEEEECCCC
Confidence 88887765543
No 47
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=98.64 E-value=6.8e-08 Score=91.67 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=60.7
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCC-----------------CCCccCCHHHHHHHHHHHHHH
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC-----------------SNHNSVGEDAARETIEKVMAD 83 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~-----------------~~~~~~~~~~~~~~i~~~i~~ 83 (235)
++|+||||+|+|++|++|+|.. +|+++.+.+.+. ..+.+++|+++|+.+.+++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~--------~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~ 75 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLS--------NGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPA 75 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHH
T ss_pred CCEEEEEecCCcceEEEEEECC--------CCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHH
Confidence 3599999999999999999952 799999887643 233578999999999999999
Q ss_pred HHHHcCCCcccceeeEEeccC
Q 026689 84 ALLKSGSNRSAVRAVCLAVSG 104 (235)
Q Consensus 84 ~l~~~~~~~~~i~~igigi~G 104 (235)
+++++++.+.+|.+|+|+..+
T Consensus 76 ~l~~~~~~~~~I~~Igis~q~ 96 (572)
T 3jvp_A 76 VMKESGVDADDVIGIGVDFTA 96 (572)
T ss_dssp HHHC---CCSCEEEEEEEECS
T ss_pred HHHHcCCChhHEEEEEEecCC
Confidence 999888877889998876643
No 48
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=98.59 E-value=7.9e-08 Score=89.58 Aligned_cols=70 Identities=11% Similarity=0.066 Sum_probs=55.4
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC-----CCccCCHHHHHHHHHHHHHHHHHHcCCCccc
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-----NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (235)
||+|+||||+|+|++|++++|. +|+++...+.+.. .+.+++|+++|+.+++++++++ + .+
T Consensus 4 mm~~~lgIDiGTts~Ka~l~d~---------~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~-----~~ 68 (482)
T 3h6e_A 4 STGATIVIDLGKTLSKVSLWDL---------DGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D-----HP 68 (482)
T ss_dssp ----CEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----SC
T ss_pred hhceEEEEEcCCCCeEEEEEEC---------CCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----cC
Confidence 5669999999999999999998 9999998877543 3447899999999999999886 3 36
Q ss_pred ceeeEEeccC
Q 026689 95 VRAVCLAVSG 104 (235)
Q Consensus 95 i~~igigi~G 104 (235)
|.+|+++..+
T Consensus 69 I~aIgis~~~ 78 (482)
T 3h6e_A 69 VTTIVPVGHG 78 (482)
T ss_dssp CCEEEEEECS
T ss_pred CCEEEEecCc
Confidence 8888776665
No 49
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=98.52 E-value=2.9e-07 Score=85.49 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=60.2
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC------CCccCCHHHHHHHHHHHHHHHHHHcCCCcccce
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (235)
|+||||+|||++|++++|. +|+++.+.+.+.. .+.+++++++|+.+.+++++++++.+ +.+|.
T Consensus 1 ~~lgiDiGtt~~k~~l~d~---------~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~--~~~i~ 69 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNE---------QGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS--LQDVK 69 (484)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC--CTTCC
T ss_pred CEEEEEecCcccEEEEECC---------CCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC--ccceE
Confidence 4799999999999999999 8999998876532 23468999999999999999988753 45799
Q ss_pred eeEEeccC
Q 026689 97 AVCLAVSG 104 (235)
Q Consensus 97 ~igigi~G 104 (235)
+|+++.+|
T Consensus 70 ~Igis~~~ 77 (484)
T 2itm_A 70 ALGIAGQM 77 (484)
T ss_dssp EEEEEECS
T ss_pred EEEEcCCc
Confidence 99999888
No 50
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=98.48 E-value=2.6e-07 Score=86.98 Aligned_cols=107 Identities=19% Similarity=0.162 Sum_probs=71.2
Q ss_pred cCCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCC----------CCC-------ccCCHHH-HHHHHHH
Q 026689 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC----------SNH-------NSVGEDA-ARETIEK 79 (235)
Q Consensus 18 ~~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~----------~~~-------~~~~~~~-~~~~i~~ 79 (235)
.+| +|+||||+|+|++|++|+|. +|++++..+.+. ..+ .+++|++ |++.+..
T Consensus 7 ~~~-~~~lgID~GTts~Ka~l~d~---------~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~ 76 (538)
T 4bc3_A 7 APR-RCCLGWDFSTQQVKVVAVDA---------ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDI 76 (538)
T ss_dssp --C-CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHH
T ss_pred CCC-CEEEEEEEcCcCEEEEEECC---------CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHH
Confidence 444 49999999999999999999 999999987642 111 2456765 5555544
Q ss_pred HHHHHHHHcCCCcccceeeEEeccCCCC------ccHH---------HHHHHHHHhhCCCCceEEEeCcHHHHH
Q 026689 80 VMADALLKSGSNRSAVRAVCLAVSGVNH------PTDQ---------QRILNWLRDIFPGNVRLYVHNDALAAL 138 (235)
Q Consensus 80 ~i~~~l~~~~~~~~~i~~igigi~G~~~------~~~~---------~~l~~~l~~~~~~~~~v~v~NDa~~a~ 138 (235)
+.+.+.++++++.+|.+|++ +|... .... .+|.+.|+...|. .|..+.+|.+++-
T Consensus 77 -~~~~l~~~~~~~~~I~aIgi--s~q~~~~v~~D~~g~~~l~~l~~~~~l~~~~~~~~pl-~~ai~W~D~R~~~ 146 (538)
T 4bc3_A 77 -ILEKMKASGFDFSQVLALSG--AGQQHGSIYWKAGAQQALTSLSPDLRLHQQLQDCFSI-SDCPVWMDSSTTA 146 (538)
T ss_dssp -HHHHHHHTTCCGGGEEEEEE--EECSSCEEEEETTHHHHHHTCCTTSCHHHHHTTCBSC-SEEECTTCCCCHH
T ss_pred -HHHHHHHcCCChHHeEEEEe--cccceeEEEECCCccccccccccccchhhhccccccc-cCCcccccCcHHH
Confidence 44556777788888998755 55532 2222 1344555444454 7899999988653
No 51
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=98.45 E-value=5.9e-07 Score=84.27 Aligned_cols=70 Identities=19% Similarity=0.159 Sum_probs=58.5
Q ss_pred CcEEEEEEcCccceEEEEEe-CccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeE
Q 026689 21 REVILGLDGGTTSTVCICMP-VISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d-~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ig 99 (235)
++|+||||+|+|++|++|+| . +|+++.+.+.+...+.+++++++|+.++++++++ +. +.+|.+|+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~---------~G~i~~~~~~~~~g~~e~d~~~~~~~i~~~l~~~----~~-~~~I~~Ig 69 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAE---------TGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQA----GG-LDDVSALA 69 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEECCSSSEECTHHHHHHHHHHHHHT----TC-STTEEEEE
T ss_pred CcEEEEEEeccccEEEEEEECC---------CCeEEEEEEEeCCCCceECHHHHHHHHHHHHHhc----CC-ccCceEEE
Confidence 35999999999999999999 8 8999999988766667899999999988877653 33 46799988
Q ss_pred EeccC
Q 026689 100 LAVSG 104 (235)
Q Consensus 100 igi~G 104 (235)
++..+
T Consensus 70 is~q~ 74 (515)
T 3i8b_A 70 VGGQQ 74 (515)
T ss_dssp EEECS
T ss_pred EeCCc
Confidence 77766
No 52
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=98.37 E-value=1.2e-05 Score=69.32 Aligned_cols=124 Identities=14% Similarity=0.080 Sum_probs=80.5
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
++|+||+|+|++|+++++. ++++.+.+.++. . ...+++ ...+.++++..+.++++|.+++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~----------~~l~~~~r~~T~-~--~t~de~----~~~l~~ll~~~~~~~~~I~~iiISS 65 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG----------DEIKLRFRHTSK-V--STSDEL----GIFLKSVLRENNCSPETIRKIAICS 65 (266)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECS-C--CCHHHH----HHHHHHHHHTTTCCGGGCCEEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC----------CEEEEEEEecCC-C--CCHHHH----HHHHHHHHHHcCCChhhceEEEEec
Confidence 5899999999999999985 577777766543 2 456664 3445556777777777899988877
Q ss_pred cCCCCccHHHHHHHHHHhhCCCCceEE------------EeC------cHHHHHHhhc--CCCCCEEEEEeCCCceeEEE
Q 026689 103 SGVNHPTDQQRILNWLRDIFPGNVRLY------------VHN------DALAALASGT--MGKLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 103 ~G~~~~~~~~~l~~~l~~~~~~~~~v~------------v~N------Da~~a~~~~~--~g~~~gi~li~GTGs~~~g~ 162 (235)
+++ .-...+.+.+++.|+. .|++ .+| |-.++++++. .+..+.+|+-+||-+---.+
T Consensus 66 Vvp---~~~~~l~~~~~~~~~~-~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~~~~~~iVVD~GTA~T~d~v 141 (266)
T 3djc_A 66 VVP---QVDYSLRSACVKYFSI-DPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFPNQNIIVIDFGTATTFCAI 141 (266)
T ss_dssp SCH---HHHHHHHHHHHHHTCC-CCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHSTTSEEEEEEESSEEEEEEE
T ss_pred chH---hHHHHHHHHHHHHcCC-CeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhcCCCCEEEEECCCeeEEEEE
Confidence 764 3334567777776652 2222 222 4445555543 22347899999997643334
Q ss_pred ecCCc
Q 026689 163 TEDGR 167 (235)
Q Consensus 163 ~~~G~ 167 (235)
..+|+
T Consensus 142 ~~~g~ 146 (266)
T 3djc_A 142 SHKKA 146 (266)
T ss_dssp CTTSE
T ss_pred cCCCc
Confidence 44554
No 53
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=98.31 E-value=7.9e-06 Score=69.75 Aligned_cols=126 Identities=19% Similarity=0.145 Sum_probs=77.4
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeE
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ig 99 (235)
|.+++|.||+|.|++|+++++. ++++.+.+.++. . ....+++...+.+.++. .+.++.+++
T Consensus 1 ~~~M~L~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~-~-~~t~de~~~~l~~l~~~-------~~~~i~~i~ 61 (249)
T 3bex_A 1 MDPMYLLVDVGNTHSVFSITED----------GKTFRRWRLSTG-V-FQTEDELFSHLHPLLGD-------AMREIKGIG 61 (249)
T ss_dssp CCCEEEEEEECSSEEEEEEESS----------SSSCEEEEEECC-T-TCCHHHHHHHHHHHHGG-------GGGGEEEEE
T ss_pred CCceEEEEEECCCeEEEEEEEC----------CEEEEEEEecCC-C-CCCHHHHHHHHHHHHhh-------ccccCCEEE
Confidence 3346899999999999999984 456666555433 2 24567766666554433 224677777
Q ss_pred EeccCCCCccHHHHHHHHHHhhCCC----------CceEEEeC------cHHHHHHhhcC-CCCCEEEEEeCCCceeEEE
Q 026689 100 LAVSGVNHPTDQQRILNWLRDIFPG----------NVRLYVHN------DALAALASGTM-GKLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 100 igi~G~~~~~~~~~l~~~l~~~~~~----------~~~v~v~N------Da~~a~~~~~~-g~~~gi~li~GTGs~~~g~ 162 (235)
++.++ |.....+.+.+++.++. ..++..+| |-.++++++.. -..+.+++-+||.+-.-.+
T Consensus 62 IsSVv---p~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~~~~~iVvD~GTA~T~d~v 138 (249)
T 3bex_A 62 VASVV---PTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVKEYGKNGIIIDMGTATTVDLV 138 (249)
T ss_dssp EEESC---HHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHHHTCSCEEEEEESSEEEEEEE
T ss_pred EEcCc---HHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHHHcCCCEEEEEcCCceEEEEE
Confidence 76554 33334555566655432 12334455 66666666531 1358999999999854434
Q ss_pred ecCCcE
Q 026689 163 TEDGRD 168 (235)
Q Consensus 163 ~~~G~~ 168 (235)
.+|+.
T Consensus 139 -~~g~~ 143 (249)
T 3bex_A 139 -VNGSY 143 (249)
T ss_dssp -ETTEE
T ss_pred -eCCeE
Confidence 67654
No 54
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=98.25 E-value=7.4e-07 Score=82.67 Aligned_cols=68 Identities=9% Similarity=0.015 Sum_probs=52.0
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeC----------CCCCccCCHHHHHHHHHHHHHHHHHHcCCC
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG----------CSNHNSVGEDAARETIEKVMADALLKSGSN 91 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~----------~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (235)
+++||||+|||++|++++|. +|+++...+.+ ...+.+++++++|+.+.++++++...
T Consensus 4 ~~~lgiDiGtts~k~~l~d~---------~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~---- 70 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARY---------ERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA---- 70 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEE---------EGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----
T ss_pred ceEEEEEecCCCceEEEEEe---------cCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----
Confidence 47999999999999999998 77766644321 12234679999999999999987652
Q ss_pred cccceeeEEec
Q 026689 92 RSAVRAVCLAV 102 (235)
Q Consensus 92 ~~~i~~igigi 102 (235)
+.+|.+|+++.
T Consensus 71 ~~~i~~Igis~ 81 (489)
T 2uyt_A 71 GIAIDSIGIDT 81 (489)
T ss_dssp TCCCCEEEEEE
T ss_pred CCCceEEEEec
Confidence 23688887776
No 55
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.19 E-value=8.6e-05 Score=63.34 Aligned_cols=114 Identities=16% Similarity=0.204 Sum_probs=72.4
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
|+||||+|+|+|+++++|. +++++........ ..++. ..+++++++++++....++..++ .
T Consensus 2 ~~lGID~GsT~tk~av~d~---------~~~il~~~~~~~g----~~~e~----a~~vl~~~~~~a~~~~~~~~~~a--~ 62 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKN---------GEDIVASETISSG----TGTTG----PSRVLEKLYGKTGLAREDIKKVV--V 62 (276)
T ss_dssp EEEEEEECSSCEEEEEEET---------TTEEEEEEEESCC----TTSSH----HHHHHHHHHHHHCCCGGGEEEEE--E
T ss_pred eEEEEEcCccEEEEEEEEC---------CCeEEEEEEecCC----CCHHH----HHHHHHHHHHHCCCcchhccccc--c
Confidence 8999999999999999998 8899887765432 12232 23456677878887776666643 3
Q ss_pred cCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--CCCCCEEEEEeCCCceeEEEecCCcEE
Q 026689 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGKLHGCVLIAGTGTIAYGFTEDGRDA 169 (235)
Q Consensus 103 ~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~--~g~~~gi~li~GTGs~~~g~~~~G~~~ 169 (235)
++.... .+. .|....|...+.+++.. .+....++.+.|.+.-..-+..+|...
T Consensus 63 t~~~~~------------a~~--~~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~~ 117 (276)
T 4ehu_A 63 TGYGRM------------NYS--DADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRLL 117 (276)
T ss_dssp ESTTGG------------GCC--SCSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCEE
T ss_pred CchHHH------------Hhh--CCCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCceE
Confidence 333210 232 46677888887766542 344456666666655444444566543
No 56
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.05 E-value=0.00032 Score=59.36 Aligned_cols=133 Identities=18% Similarity=0.065 Sum_probs=87.5
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCC---ccCCHHHHHHHHHHHHHHHHHHcCCCcccceee
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH---NSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~i 98 (235)
++++|||+|++++|+++++. +++++.....+.... ...+.+...+.+...++.+....+.. +..+
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~---------~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~---~~~~ 95 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQ---------EGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSE---LFQA 95 (272)
T ss_dssp CCEEEEECCSSEEEEEEECT---------TCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSC---CCEE
T ss_pred CEEEEEEcccceEEEEEECC---------CCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCc---cCeE
Confidence 58999999999999999987 788888776543321 12455777777777776666655543 3344
Q ss_pred EEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEEEeCCCceeEEEecCCcEEE
Q 026689 99 CLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (235)
Q Consensus 99 gigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~li~GTGs~~~g~~~~G~~~~ 170 (235)
.+.+|..........+...+ +.++. ....+.++..+++++. +..+++++=+|-|+.-..+..+|.+..
T Consensus 96 v~tvp~~~~~~~~~~~~~~~-~~~g~-~~~~i~~e~~A~a~~~--~~~~~~viDiGggst~~~~~~~g~~~~ 163 (272)
T 3h1q_A 96 ATAIPPGTVGRNAEACGHVV-AGAGL-ELVTLVDEPVAAARAL--GINDGIVVDIGGGTTGIAVIEKGKITA 163 (272)
T ss_dssp EEECCSCC---CTTHHHHHH-HHTTC-EEEEEECHHHHHHHHH--TCSSEEEEEECSSCEEEEEEETTEEEE
T ss_pred EEEcCCCCCHHHHHHHHHHH-HHcCC-eeeecccHHHHHHHHH--cCCCEEEEEECCCcEEEEEEECCEEEE
Confidence 46667654333333444443 44663 4578889888887643 345789999999987666667776653
No 57
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.80 E-value=8.7e-05 Score=63.72 Aligned_cols=115 Identities=13% Similarity=0.173 Sum_probs=68.3
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
+|+||||+|+|+||++++|. +|+++.+.+.++.. +|. +.+.++++++.+ .++++.+|.++ +
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~---------~g~i~~~~~~~~~~----~~~---~~~~~~l~~l~~-~~~~~~~i~~i--~ 63 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKD---------GKEIVAKSLVAVGT----GTS---GPARSISEVLEN-AHMKKEDMAFT--L 63 (270)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCS----SCC---HHHHHHHHHHHH-HTCCGGGCSEE--E
T ss_pred cEEEEEEeccceEEEEEEeC---------CCCEEEEEEecCCC----CHH---HHHHHHHHHHHH-cCCChhHEEEE--E
Confidence 38999999999999999998 89999988765431 222 344455556544 34455567664 6
Q ss_pred ccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--CCCCCEEEEEeCCCceeEEEecCCcEE
Q 026689 102 VSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGKLHGCVLIAGTGTIAYGFTEDGRDA 169 (235)
Q Consensus 102 i~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~--~g~~~gi~li~GTGs~~~g~~~~G~~~ 169 (235)
++|..... +.. ++ .+ +.++..+...+.. .+. ..+++-+|.+-.-.-++.+|++.
T Consensus 64 ~TG~g~~~--------~~~-~~--~~--~v~Ei~ah~~ga~~~~~~-~~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 64 ATGYGRNS--------LEG-IA--DK--QMSELSCHAMGASFIWPN-VHTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp EESTTTTT--------TTT-TC--SE--EECHHHHHHHHHHHHCTT-CCEEEEEETTEEEEEEEETTEEE
T ss_pred EeCccccc--------hhh-cC--CC--CcccHHHHHHHHHHhCCC-CCEEEEECCCceEEEEEeCCcee
Confidence 68875321 111 33 33 3677766554432 233 33456666654333344677543
No 58
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=97.78 E-value=0.00093 Score=57.48 Aligned_cols=123 Identities=19% Similarity=0.119 Sum_probs=77.5
Q ss_pred EEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEecc
Q 026689 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (235)
Q Consensus 24 ~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi~ 103 (235)
+|.||+|.|.+|+++++. ++++...+..+... ...+++... +.++++..++++.+|.++.++..
T Consensus 2 lL~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~~~--~t~de~~~~----l~~ll~~~~~~~~~i~~iiISSV 65 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE----------GELRQHWRMETDRH--KTEDEYGML----VKQLLEHEGLSFEDVKGIIVSSV 65 (268)
T ss_dssp EEEEEECSSEEEEEEEET----------TEEEEEEEEECCTT--CCHHHHHHH----HHHHHHHTTCCGGGCCEEEEEES
T ss_pred EEEEEECcCcEEEEEEEC----------CEEEEEEEecCCCc--CCHHHHHHH----HHHHHHHcCCCcccCcEEEEEcc
Confidence 799999999999999985 56776666544322 455665444 44566667777777888766544
Q ss_pred CCCCccHHHHHHHHHHhhCCCCceEEEe--------C----------cHHHHHHhhc--CCCCCEEEEEeCCCceeEEEe
Q 026689 104 GVNHPTDQQRILNWLRDIFPGNVRLYVH--------N----------DALAALASGT--MGKLHGCVLIAGTGTIAYGFT 163 (235)
Q Consensus 104 G~~~~~~~~~l~~~l~~~~~~~~~v~v~--------N----------Da~~a~~~~~--~g~~~gi~li~GTGs~~~g~~ 163 (235)
. |.-...+.+.+++.|+. .|+++. | |--++++++. .+ .+.+|+-+||-.---.++
T Consensus 66 --v-p~~~~~l~~~~~~~~~~-~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~-~~~iVVD~GTAtT~d~v~ 140 (268)
T 2h3g_X 66 --V-PPIMFALERMCEKYFKI-KPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYG-SPLIIVDFGTATTYCYIN 140 (268)
T ss_dssp --C-HHHHHHHHHHHHHHTCC-CCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHC-SSEEEEEESSEEEEEEEC
T ss_pred --C-hhHHHHHHHHHHHHhCC-CeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhcC-CCEEEEECCCceEEEEEC
Confidence 3 44445677788887753 333321 1 3334444432 23 589999999977433344
Q ss_pred cCCc
Q 026689 164 EDGR 167 (235)
Q Consensus 164 ~~G~ 167 (235)
.+|+
T Consensus 141 ~~g~ 144 (268)
T 2h3g_X 141 EEKH 144 (268)
T ss_dssp TTSE
T ss_pred CCCc
Confidence 5554
No 59
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.68 E-value=0.071 Score=46.70 Aligned_cols=136 Identities=15% Similarity=0.167 Sum_probs=82.4
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC-CCccCCHH----HHHHHHHHHHHHHHHHcCCCccccee
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-NHNSVGED----AARETIEKVMADALLKSGSNRSAVRA 97 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~-~~~~~~~~----~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (235)
++||||.+.+.+.++|++. +++++....... ......|+ .-.+.+..+++++++++++++++|.+
T Consensus 2 ~iLgIdts~~~~~val~~~----------g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~ 71 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE----------DKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDV 71 (330)
T ss_dssp CEEEEECSSSEEEEEEECS----------SCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCE
T ss_pred EEEEEEccCCCeEEEEEEC----------CEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 5899999999999999975 578865543211 11112244 23567778999999999999999999
Q ss_pred eEEeccCCCCcc---HHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC-C-CCCEEEEEeCCCceeEEEecCCcEEEeC
Q 026689 98 VCLAVSGVNHPT---DQQRILNWLRDIFPGNVRLYVHNDALAALASGTM-G-KLHGCVLIAGTGTIAYGFTEDGRDARAA 172 (235)
Q Consensus 98 igigi~G~~~~~---~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~-g-~~~gi~li~GTGs~~~g~~~~G~~~~~G 172 (235)
|+++ .|+.... -...+.+.|...++ .|+.-.|=-.+-+++... + ....++++.|-.+-...+ .+|+....|
T Consensus 72 Ia~~-~GPG~~~~lrvg~~~ak~la~~~~--~pl~~v~h~~aHa~~a~~~~~~~~~~l~v~GG~t~~i~~-~~~~~~~lg 147 (330)
T 2ivn_A 72 IAFS-QGPGLGPALRVVATAARALAVKYR--KPIVGVNHCIAHVEITKMFGVKDPVGLYVSGGNTQVLAL-EGGRYRVFG 147 (330)
T ss_dssp EEEE-EESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHHGGGGGTCCSCEEEEECSSCEEEEEE-ETTEEEEEE
T ss_pred EEEE-CCCCchHHHHHHHHHHHHHHHHcC--CCEEeeCcHHHHHHHHhhcCCCCCeEEEEcCCCceEEEE-cCCeEEEEE
Confidence 8653 3554322 12345556666665 687777655544443322 2 224566667733332323 366665554
No 60
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=96.58 E-value=0.038 Score=47.47 Aligned_cols=137 Identities=23% Similarity=0.237 Sum_probs=76.6
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeE
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ig 99 (235)
|..++|.||+|=|++++++++. +++++...+..+ .+++...+. . ++..++..+.
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~---------~~~~~~~~r~~t-------~de~~~~l~--------~--~~~~~i~~vi 74 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEG---------AARSVAGGLAES-------DDALVEQLT--------S--QQALPVRACR 74 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEET---------TTEEEEEEEESS-------HHHHHHHHH--------H--TTTSCEEEEE
T ss_pred ccCcEEEEEeCCCeeEEEEEeC---------CCEEEEEEEecC-------HHHHHHHHh--------c--CcccCCCEEE
Confidence 4446899999999999999994 456776666432 122222222 1 2334677765
Q ss_pred EeccCCCCccHHHHHHHHHHhhCCCCceEEE---------eC----------cHHHHHHhhc--CCCCCEEEEEeCCCce
Q 026689 100 LAVSGVNHPTDQQRILNWLRDIFPGNVRLYV---------HN----------DALAALASGT--MGKLHGCVLIAGTGTI 158 (235)
Q Consensus 100 igi~G~~~~~~~~~l~~~l~~~~~~~~~v~v---------~N----------Da~~a~~~~~--~g~~~gi~li~GTGs~ 158 (235)
+ +....|.-...+.+.+++.|+. .|.++ .| |-.++++++. .+ .+.+|+-+||-.-
T Consensus 75 i--sSV~vp~~~~~l~~~~~~~~~~-~p~~v~~~~~~~gl~~~Y~~P~~lGaDR~~~avaA~~~y~-~~~iVVD~GTAtT 150 (271)
T 2f9w_A 75 L--VSVRSEQETSQLVARLEQLFPV-SALVASSGKQLAGVRNGYLDYQRLGLDRWLALVAAHHLAK-KACLVIDLGTAVT 150 (271)
T ss_dssp E--EECSCHHHHHHHHHHHHHHSSC-CCEECCCCSEETTEECCSSSGGGSCHHHHHHHHHHHHHHS-SCEEEEEESSEEE
T ss_pred E--EECCchHHHHHHHHHHHHHcCC-CeEEEeCCCccCCceecCCChhhccHHHHHHHHHHHHhcC-CCEEEEEcCCceE
Confidence 5 3332355556777888887753 33333 22 2233444432 23 5899999999764
Q ss_pred eEEEecCCcEEEeCCCCccccccchHHHHHHHHHHH
Q 026689 159 AYGFTEDGRDARAAGAGPILGDWGSGYGIAAQALTA 194 (235)
Q Consensus 159 ~~g~~~~G~~~~~Gg~G~llgd~gSg~~ig~~al~~ 194 (235)
--.+..+|+..- |--.-|..+.++||..
T Consensus 151 ~D~V~~~G~~lG--------G~I~PGi~l~~~AL~~ 178 (271)
T 2f9w_A 151 SDLVAADGVHLG--------GYICPGMTLMRSQLRT 178 (271)
T ss_dssp EEEECTTSBEEE--------EEEEECHHHHHHHHHH
T ss_pred EEEECCCCeEEE--------EEECCCHHHHHHHHHH
Confidence 333334554321 1123345566666554
No 61
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=96.56 E-value=0.0079 Score=54.71 Aligned_cols=75 Identities=12% Similarity=0.113 Sum_probs=56.6
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCC---ccCCHHHHHHHHHHHHHHHHHHcCCCccccee-
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH---NSVGEDAARETIEKVMADALLKSGSNRSAVRA- 97 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~- 97 (235)
++++|+|+|+|++++++.....+ ..++++....++... .-.+.+.+.+.|.++++++-..++. ++..
T Consensus 8 ~~ivglDIGts~I~~vv~~~~~~------~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~---~i~~~ 78 (419)
T 4a2a_A 8 VFYTSIDIGSRYIKGLVLGKRDQ------EWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQK---SLRSD 78 (419)
T ss_dssp CEEEEEEECSSEEEEEEEEC----------CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTS---CCCSE
T ss_pred CEEEEEEccCCEEEEEEEEEcCC------CCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCC---CcCce
Confidence 48999999999999999885211 227888777653311 1258899999999999999887776 4677
Q ss_pred eEEeccCC
Q 026689 98 VCLAVSGV 105 (235)
Q Consensus 98 igigi~G~ 105 (235)
+.+++||.
T Consensus 79 v~v~i~g~ 86 (419)
T 4a2a_A 79 FVISFSSV 86 (419)
T ss_dssp EEEEECCT
T ss_pred EEEEEcCC
Confidence 78899998
No 62
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=96.19 E-value=0.012 Score=45.51 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=55.9
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEE-EeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceee
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~-~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~i 98 (235)
|+..+||+|.|..++=+++.|. .+.+..-. .....+. +..++.|.+.+++- ++..|
T Consensus 1 ~~~~iLglD~G~kriGvAvsd~---------~~~~A~pl~ti~~~~~-----~~~~~~l~~li~e~---------~v~~i 57 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQR---------ITGTARPLPAIKAQDG-----TPDWNIIERLLKEW---------QPDEI 57 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEET---------TTTEEEEEEEEEEETT-----EECHHHHHHHHHHH---------CCSEE
T ss_pred CCCeEEEEEeCCCEEEEEEEcC---------CCCEEeeEEEEEcCCc-----chHHHHHHHHHHHc---------CCCEE
Confidence 5667999999999999999997 44432211 1111111 12244555554442 46788
Q ss_pred EEeccCC----CCccH--HHHHHHHHHhhCCCCceEEEeCcHH
Q 026689 99 CLAVSGV----NHPTD--QQRILNWLRDIFPGNVRLYVHNDAL 135 (235)
Q Consensus 99 gigi~G~----~~~~~--~~~l~~~l~~~~~~~~~v~v~NDa~ 135 (235)
.+|+|=- .++.. ...+.+.|++.++ .||...+--.
T Consensus 58 VvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~--lpV~~~DERl 98 (138)
T 1nu0_A 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFG--VEVKLHDERL 98 (138)
T ss_dssp EEEEEECTTSCBCHHHHHHHHHHHHHHHHHC--CCEEEEEEEC
T ss_pred EEecccCCCcCcCHHHHHHHHHHHHHHHHhC--CCEEEEcCCc
Confidence 8998843 32222 2567778877786 7887776544
No 63
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.00 E-value=0.098 Score=45.67 Aligned_cols=138 Identities=13% Similarity=0.107 Sum_probs=84.5
Q ss_pred cCCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCc------cCCHHHHHHHHHHHHHHHH---HHc
Q 026689 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN------SVGEDAARETIEKVMADAL---LKS 88 (235)
Q Consensus 18 ~~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~------~~~~~~~~~~i~~~i~~~l---~~~ 88 (235)
+++| .+.+||+|+.++|..|++..++ .-+++.+.+....--. ..+ ++.+++..++++++. +..
T Consensus 9 ~~~m-~~a~IDiGSns~rl~I~~~~~~------~~~~i~~~k~~vrLg~g~~~~g~ls-~eai~r~~~~L~~f~~~~~~~ 80 (315)
T 1t6c_A 9 KPIM-RVASIDIGSYSVRLTIAQIKDG------KLSIILERGRITSLGTKVKETGRLQ-EDRIEETIQVLKEYKKLIDEF 80 (315)
T ss_dssp -CCE-EEEEEEECSSEEEEEEEEEETT------EEEEEEEEEEECCTTTTHHHHSSCC-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCc-EEEEEEECcCcEEEEEEEEcCC------cEEEEeeeeEEeecCCCccccCCcC-HHHHHHHHHHHHHHHHHHHHC
Confidence 3444 5789999999999999997210 2234444443311000 122 345556666665554 344
Q ss_pred CCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHH---hh--cCC-CCCEEEEEeCCCceeEEE
Q 026689 89 GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALA---SG--TMG-KLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 89 ~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~---~~--~~g-~~~gi~li~GTGs~~~g~ 162 (235)
++ +++.+ ++.+++=+..+...+.+.+++.++ .++.|.+..+=|.+ +. ..+ ..+++++=+|.||--..+
T Consensus 81 ~v--~~i~~--vATsA~R~A~N~~~fl~~v~~~~G--~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~ 154 (315)
T 1t6c_A 81 KV--ERVKA--VATEAIRRAKNAEEFLERVKREVG--LVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVF 154 (315)
T ss_dssp TC--SEEEE--EECHHHHTSTTHHHHHHHHHHHTC--CCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEE
T ss_pred CC--CeEEE--EEcHHHHcCcCHHHHHHHHHHHHC--CCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEE
Confidence 43 24544 567777555566778888888888 78888888774433 21 122 456899999999977666
Q ss_pred ecCCcEE
Q 026689 163 TEDGRDA 169 (235)
Q Consensus 163 ~~~G~~~ 169 (235)
..++++.
T Consensus 155 ~~~~~~~ 161 (315)
T 1t6c_A 155 GKGYKVR 161 (315)
T ss_dssp EETTEEE
T ss_pred EeCCcee
Confidence 6666543
No 64
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.77 E-value=0.04 Score=52.70 Aligned_cols=85 Identities=18% Similarity=0.197 Sum_probs=57.1
Q ss_pred ccccccccccccCCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCC------------c---cCCHH
Q 026689 7 GEIWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH------------N---SVGED 71 (235)
Q Consensus 7 ~~~~~~~~~~~~~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~------------~---~~~~~ 71 (235)
.++++++...+.. ..|=++||+|+|.+.+.++|.. .|++++......++. . +.+.+
T Consensus 192 ~~ii~ve~g~~~~-~~~GlAvDiGTTtv~~~LvdL~--------tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~ 262 (631)
T 3zyy_X 192 NKALYIKSGSASQ-RVFGLAIDIGTTTVVVQLVDLV--------SGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAE 262 (631)
T ss_dssp EEEEEEEESSCCC-CCEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHH
T ss_pred ceEEEEecCCCCC-CceEEEEEecccceeEEEEECC--------CCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHH
Confidence 3455555443322 2478999999999999999974 899999886532210 0 11222
Q ss_pred H----HHHHHHHHHHHHHHHcCCCcccceeeEE
Q 026689 72 A----ARETIEKVMADALLKSGSNRSAVRAVCL 100 (235)
Q Consensus 72 ~----~~~~i~~~i~~~l~~~~~~~~~i~~igi 100 (235)
+ +++.|.+++.++..++++++++|..+.+
T Consensus 263 ~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v 295 (631)
T 3zyy_X 263 KLRKAVLSTINELIFQLCKEHGVEKKEIMAAVV 295 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEE
Confidence 2 4566667777777778999999887654
No 65
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.70 E-value=0.15 Score=44.50 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=83.6
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC---CCc---cCCHHHHHHHHHHHHHHHH---HHcCC
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS---NHN---SVGEDAARETIEKVMADAL---LKSGS 90 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~l---~~~~~ 90 (235)
|.+.+.+||+|+.++|..|++...+ .-+++.+.+.... ... ..+ ++.+++..++++.+. +..++
T Consensus 2 m~~~~A~IDiGSNsirL~I~~~~~~------~~~~i~~~k~~vrLg~g~~~~g~ls-~eai~r~~~~L~~f~~~~~~~~v 74 (315)
T 3mdq_A 2 MSQRIGVIDMGTNTFHLLITDIVND------RPHTLVNEKSAVGLGKGGITKGFIT-EEAMDRALDTLKKFRVILDEHAV 74 (315)
T ss_dssp --CEEEEEEECSSEEEEEEEEEETT------EEEEEEEEEEECCSSTTTGGGTCCC-HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEEecCCcEEEEEEEEcCC------ceEEeeeceeeeeccccccccCCcC-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 6667899999999999999986211 2344555544311 100 123 345556666666553 44444
Q ss_pred CcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHH---Hhh---c-CCCCCEEEEEeCCCceeEEEe
Q 026689 91 NRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAAL---ASG---T-MGKLHGCVLIAGTGTIAYGFT 163 (235)
Q Consensus 91 ~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~---~~~---~-~g~~~gi~li~GTGs~~~g~~ 163 (235)
+++.+ ++.+.+=+..+...+.+.+++.++ .++.|.+..+=|. ++. . ....+++++=+|.||-=..+.
T Consensus 75 --~~v~~--vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~ 148 (315)
T 3mdq_A 75 --VHVIA--TGTSAVRSGSNKQVLIDRIKKEVN--IDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIG 148 (315)
T ss_dssp --CEEEE--EECHHHHHCTTHHHHHHHHHHHHC--CCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEE
T ss_pred --CEEEE--EeeHHHHcCcCHHHHHHHHHHHHC--CCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEE
Confidence 34554 566666444556677888888888 7888877766332 222 1 112468999999999766666
Q ss_pred cCCcEE
Q 026689 164 EDGRDA 169 (235)
Q Consensus 164 ~~G~~~ 169 (235)
.++++.
T Consensus 149 ~~~~~~ 154 (315)
T 3mdq_A 149 NKNEIL 154 (315)
T ss_dssp CSSCEE
T ss_pred ECCeEe
Confidence 666554
No 66
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=95.69 E-value=0.3 Score=43.07 Aligned_cols=91 Identities=18% Similarity=0.251 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHH-HHcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEEE
Q 026689 74 RETIEKVMADAL-LKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLI 152 (235)
Q Consensus 74 ~~~i~~~i~~~l-~~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~li 152 (235)
|+.+...++.++ +..+..+.+ ..+.+..|-..+...+..+.+.+-+.++. ..+++.|...+|+++. |...++|+=
T Consensus 79 ~d~~e~i~~~~~~~~L~~~~~~-~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~~~~e~~aaa~a~--g~~~~lVvD 154 (375)
T 2fxu_A 79 WDDMEKIWHHTFYNELRVAPEE-HPTLLTEAPLNPKANREKMTQIMFETFNV-PAMYVAIQAVLSLYAS--GRTTGIVLD 154 (375)
T ss_dssp HHHHHHHHHHHHHTTSCCCGGG-SCEEEEECTTCCHHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHHT--TCSSEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCcC-CcEEEEeCCCCcHHHHHHHHHHHHHhcCc-ceEEEccchheeeeec--CCCeEEEEE
Confidence 556667777776 344555533 34667888777666666677776666774 5689999999998863 456899999
Q ss_pred eCCCceeEEEecCCcE
Q 026689 153 AGTGTIAYGFTEDGRD 168 (235)
Q Consensus 153 ~GTGs~~~g~~~~G~~ 168 (235)
+|.|.--...+.+|..
T Consensus 155 iG~gtt~v~~v~~G~~ 170 (375)
T 2fxu_A 155 SGDGVTHNVPIYEGYA 170 (375)
T ss_dssp ECSSCEEEEEEETTEE
T ss_pred cCCCceEEeEeECCEE
Confidence 9999765555567754
No 67
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=94.92 E-value=1.8 Score=37.89 Aligned_cols=136 Identities=16% Similarity=0.197 Sum_probs=81.6
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC-CCccCCHHH----HHHHHHHHHHHHHHHcCCCccccee
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-NHNSVGEDA----ARETIEKVMADALLKSGSNRSAVRA 97 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~-~~~~~~~~~----~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (235)
++||||.-...+-++|++. +++++....... .+...-|+. =.+.+..+++++++++++++++|.+
T Consensus 7 ~iLgIdts~~~~svAl~~~----------~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~ 76 (334)
T 3eno_A 7 IVLGLEGTAHTISCGIIDE----------SRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDL 76 (334)
T ss_dssp EEEEEECSSSEEEEEEEES----------SCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 7999999888899999985 467765432111 111122332 2567888999999999999999999
Q ss_pred eEEeccCCCCccH---HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--CC-CCCEEEEEeCCCceeEEEecCCcEEEe
Q 026689 98 VCLAVSGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALASGT--MG-KLHGCVLIAGTGTIAYGFTEDGRDARA 171 (235)
Q Consensus 98 igigi~G~~~~~~---~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~--~g-~~~gi~li~GTGs~~~g~~~~G~~~~~ 171 (235)
|+++. ||..-.. ...+.+.|...++ .|+.-.|=-.+-+++.. .+ ....++++.|-++... ...+++....
T Consensus 77 Iav~~-gPG~~t~lrvg~~~ak~La~~~~--~Pl~~v~hl~aHa~sa~~~s~~~~pl~L~vsGg~t~l~-~~~~~~~~~l 152 (334)
T 3eno_A 77 IGFSM-GPGLAPSLRVTATAARTISVLTG--KPIIGVNHPLGHIEIGRRVTGAIDPVMLYVSGGNTQVI-AHVNGRYRVL 152 (334)
T ss_dssp EEEEC-SSSCHHHHHHHHHHHHHHHHHHT--CCCEEECHHHHHHHHHHHHHTCSSCEEEEESSSCEEEE-EECSSBEEEE
T ss_pred EEEEc-CCCCcchHHHHHHHHHHHhhccC--CCeEEeccHHHHHHHHHhcCCCCCCEEEEEECCCcEEE-EEeCCEEEEe
Confidence 87753 5543222 3344555655555 67766664442222211 11 2346777788776433 2345555444
Q ss_pred C
Q 026689 172 A 172 (235)
Q Consensus 172 G 172 (235)
|
T Consensus 153 g 153 (334)
T 3eno_A 153 G 153 (334)
T ss_dssp E
T ss_pred c
Confidence 4
No 68
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=94.74 E-value=0.068 Score=47.19 Aligned_cols=86 Identities=17% Similarity=0.141 Sum_probs=40.1
Q ss_pred EEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEecc
Q 026689 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (235)
Q Consensus 24 ~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi~ 103 (235)
++|+|+||-++|+++.+. +|.+ ...+.+++-| ++++. +.++++++.++ +....|-++
T Consensus 2 iiG~DIGGAn~K~a~~~~---------~g~~-~~~~~~~PlW--~~~~~----L~~~l~~~~~~-------~~~~avtMT 58 (334)
T 3cet_A 2 ILGIDIGGANTKITELHE---------NGEF-KVHHLYFPMW--KNNDK----LAEVLKTYSND-------VSHVALVTT 58 (334)
T ss_dssp EEEEEEC--CEEEEEECS---------TTCC-EEEEC----------------------------------CCEEEEEEC
T ss_pred eeEEEecccceeeeeecC---------CCce-EEEEEecCCc--CCchH----HHHHHHHHHhh-------hccEEEEec
Confidence 799999999999999887 7887 4445444434 45444 44444444332 233446778
Q ss_pred CCC-----CccH-HHHHHHHHHhhCCCCceE-EEeCcH
Q 026689 104 GVN-----HPTD-QQRILNWLRDIFPGNVRL-YVHNDA 134 (235)
Q Consensus 104 G~~-----~~~~-~~~l~~~l~~~~~~~~~v-~v~NDa 134 (235)
|=- +..+ -..+.+.+++.|+ .|| ++.-|.
T Consensus 59 gELaD~f~~k~eGV~~I~~~v~~~~~--~~v~i~~~dG 94 (334)
T 3cet_A 59 AELADSYETKKEGVDNILNAAESAFG--SNISVFDSNG 94 (334)
T ss_dssp CC------CTTHHHHHHHHHHHHHHT--TCEEEECSSS
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHhcC--CceEEEecCC
Confidence 852 1222 3456677777776 564 333343
No 69
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=94.59 E-value=0.74 Score=33.16 Aligned_cols=81 Identities=10% Similarity=0.062 Sum_probs=52.7
Q ss_pred EEEEEcCccceEEEEEeCccCCCCCCCCCCE---EEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEE
Q 026689 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (235)
Q Consensus 24 ~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~i---l~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igi 100 (235)
+||+|.|..++=+++.|. .+.+ +..... .+.+..++.|.+.+++- ++..+.+
T Consensus 3 iLglD~G~kriGvAvsd~---------~~~~A~pl~ti~~-------~~~~~~~~~l~~li~e~---------~v~~iVv 57 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE---------GVPLASGRGYLVR-------KTLEEDVEALLDFVRRE---------GLGKLVV 57 (98)
T ss_dssp EEEEEESSSEEEEEEECS---------CCSSCCCEEEEEC-------CCHHHHHHHHHHHHHHH---------TCCEEEE
T ss_pred EEEEEeCCCEEEEEEEeC---------CCCeeeeeEEEEc-------cCcHHHHHHHHHHHHHc---------CCCEEEE
Confidence 799999999999999997 4332 222221 13456666666655553 5678889
Q ss_pred eccCCC----Ccc--HHHHHHHHHHhhCCCCceEEEeC
Q 026689 101 AVSGVN----HPT--DQQRILNWLRDIFPGNVRLYVHN 132 (235)
Q Consensus 101 gi~G~~----~~~--~~~~l~~~l~~~~~~~~~v~v~N 132 (235)
|+|=-. ++. ....+.+.|+++ + .||...+
T Consensus 58 GlP~~mdGt~~~~~~~~~~f~~~L~~~-~--lpV~~~D 92 (98)
T 1iv0_A 58 GLPLRTDLKESAQAGKVLPLVEALRAR-G--VEVELWD 92 (98)
T ss_dssp ECCCCCCSSSCCCSSTTHHHHHHHHHT-T--CEEEEEC
T ss_pred eeccCCCCCcCHHHHHHHHHHHHHhcC-C--CCEEEEC
Confidence 988432 222 234677788776 5 7887664
No 70
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=94.56 E-value=0.47 Score=46.44 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=60.0
Q ss_pred cEEEEEEcC-ccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEE
Q 026689 22 EVILGLDGG-TTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (235)
Q Consensus 22 ~~~LgiD~G-gT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igi 100 (235)
+.+||+|-| -|.++++++|. +|+++.....-+..+. ...++..+. +.+++.+.. +..|+|
T Consensus 329 ~~vlg~dpg~r~g~k~a~vd~---------~G~~l~~~~iy~~~~~-~~~~~~~~~----l~~li~~~~-----~~~IaI 389 (785)
T 3bzc_A 329 RATLGLDPGLRTGVKVAVVDA---------TGKLLDTATVYPHAPK-NQWDQTLAV----LAALCAKHQ-----VELIAI 389 (785)
T ss_dssp CCEEEEECCSSSCEEEEEECT---------TSCEEEEEEECCSGGG-CCHHHHHHH----HHHHHHHHT-----CCEEEE
T ss_pred CeEEEECCCCcCceEEEEECC---------CCCEEEEEEEecCCch-hHHHHHHHH----HHHHHHHcC-----CCEEEE
Confidence 479999999 69999999999 9999998876443332 233444444 444555543 445555
Q ss_pred eccCCCCccHHHHHHHHHHhhCC-CCceEEEeCcHHHHHH
Q 026689 101 AVSGVNHPTDQQRILNWLRDIFP-GNVRLYVHNDALAALA 139 (235)
Q Consensus 101 gi~G~~~~~~~~~l~~~l~~~~~-~~~~v~v~NDa~~a~~ 139 (235)
|- |..+.+...-+.+.+++ ++ ...++.+.|+.-+-++
T Consensus 390 Gn-gtasret~~~v~~l~~~-~~~~~i~~v~v~e~gArvy 427 (785)
T 3bzc_A 390 GN-GTASRETDKLAGELIKK-YPGMKLTKIMVSEAGASVY 427 (785)
T ss_dssp ES-STTHHHHHHHHHHHHHH-CGGGCCEEEEECCHHHHHH
T ss_pred CC-CccCHHHHHHHHHHHHh-cccCCCCEEEEcCCcCCHH
Confidence 54 43333333344444444 22 1278889998876554
No 71
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.45 E-value=0.71 Score=42.88 Aligned_cols=135 Identities=11% Similarity=0.086 Sum_probs=85.6
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC---CCc---cCCHHHHHHHHHHHHHHHHHHcC-CCcccc
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS---NHN---SVGEDAARETIEKVMADALLKSG-SNRSAV 95 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~l~~~~-~~~~~i 95 (235)
.+.+||+|+.++|..|++..++ .-+++.+.+.... ... ..+ ++.+++..++++.+.+... ...+++
T Consensus 12 ~~AaIDiGSNSirL~I~~~~~~------~~~~l~~~k~~vrLg~g~~~~g~Ls-~eai~r~~~~L~~f~~~~~~~~v~~v 84 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVVDG------AMQIIGRLKQRVHLADGLGPDNMLS-EEAMTRGLNCLSLFAERLQGFSPASV 84 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEETT------EEEEEEEEEECCCTGGGBCTTCCBC-HHHHHHHHHHHHHHHHHTTTCCGGGE
T ss_pred eEEEEEeccccEEEEEEEEcCC------eeEEEEeeEEEEeccCcccccCCcC-HHHHHHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999997211 2345555554321 000 123 4667777888888766542 333445
Q ss_pred eeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHH---HHhh---cCCCCCEEEEEeCCCceeEEEecCCcE
Q 026689 96 RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG---TMGKLHGCVLIAGTGTIAYGFTEDGRD 168 (235)
Q Consensus 96 ~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a---~~~~---~~g~~~gi~li~GTGs~~~g~~~~G~~ 168 (235)
.+ ++.+.+=+..+...+.+.+++.++ .++.|.+-.+=| .+|. .....+++++=+|.||-=..+..+++.
T Consensus 85 ~~--vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 159 (513)
T 1u6z_A 85 CI--VGTHTLRQALNATDFLKRAEKVIP--YPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEP 159 (513)
T ss_dssp EE--EECHHHHHCTTHHHHHHHHTTTCS--SCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEE
T ss_pred EE--EecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCee
Confidence 44 566666444566678888888888 788888776533 2222 122236899999999966655555554
No 72
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=94.32 E-value=1.8 Score=37.62 Aligned_cols=68 Identities=19% Similarity=0.166 Sum_probs=40.7
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeC-CCCC----ccCCHHHHHHHHHHHHHHHHHHcCCCcccce
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG-CSNH----NSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~-~~~~----~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (235)
+.++|||+|+|++++++... + ..++......+ ++.. .-.+++.+.+.|.+++.+ ++. ++.
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~--~------~~~i~~~g~~~~ps~~~~~g~i~d~~~~~~~ik~~~~~----~~~---~~~ 77 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSG--N------PPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLE----ART---RKR 77 (377)
T ss_dssp CCCEEEEECSSEEEEEEEET--T------TTEEEEEEEEECCTTSEETTEESCHHHHHHHHHHHHHH----HTC---CCC
T ss_pred CceEEEEeCCCeEEEEEEeC--C------ceEEEEEEeEECCCCcccCCCcCCHHHHHHHHHHHHHH----cCC---Ccc
Confidence 36899999999999998853 0 23343333322 1211 124677766666665554 444 345
Q ss_pred eeEEeccC
Q 026689 97 AVCLAVSG 104 (235)
Q Consensus 97 ~igigi~G 104 (235)
.+.+++||
T Consensus 78 ~v~~~i~~ 85 (377)
T 2ych_A 78 YVVTALSN 85 (377)
T ss_dssp EEEEEECG
T ss_pred eEEEEecC
Confidence 56678888
No 73
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=94.25 E-value=2.4 Score=36.46 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=50.3
Q ss_pred eeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC---CCCCEEEEEeCCCceeEEEecCCcEE
Q 026689 96 RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---GKLHGCVLIAGTGTIAYGFTEDGRDA 169 (235)
Q Consensus 96 ~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~---g~~~gi~li~GTGs~~~g~~~~G~~~ 169 (235)
..+.+++|-..+...+..+.+.++. .+. ..+.+.++..+|+++... .....+++=+|-|..-..++..|...
T Consensus 96 ~~~vitvP~~~~~~~r~~~~~a~~~-aG~-~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~ 170 (344)
T 1jce_A 96 PRVVIGVPIGITDVERRAILDAGLE-AGA-SKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV 170 (344)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHH-TTC-SEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE
Confidence 4577899987666666667776644 554 578999999988875321 12467889999998666666666654
No 74
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=94.21 E-value=0.4 Score=42.58 Aligned_cols=88 Identities=9% Similarity=-0.036 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC----
Q 026689 70 EDAARETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG---- 144 (235)
Q Consensus 70 ~~~~~~~i~~~i~~~l~-~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g---- 144 (235)
++++...+.+.+.+..+ ..+. ++..+++++|..-+......+++..+.. +. ..+.+.++..+|+++....
T Consensus 127 ~~ev~~~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~~~~r~~~~~a~~~A-Gl-~~~~li~Ep~AAa~~~~~~~~~~ 201 (409)
T 4gni_A 127 VSEIATRYLRRLVGAASEYLGK---KVTSAVITIPTNFTEKQKAALIAAAAAA-DL-EVLQLISEPAAAVLAYDARPEAT 201 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEEcCHHHHHHHHhcccccC
Confidence 55665555444444332 2232 4566778999987766666677766553 43 5688999999887753211
Q ss_pred --CCCEEEEEeCCCceeEEE
Q 026689 145 --KLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 145 --~~~gi~li~GTGs~~~g~ 162 (235)
....+++=+|-|..-..+
T Consensus 202 ~~~~~vlv~D~GgGT~dvsv 221 (409)
T 4gni_A 202 ISDKIIVVADLGGSRSDVTV 221 (409)
T ss_dssp -CCEEEEEEEECSSCEEEEE
T ss_pred CCCCEEEEEECCCCceEEEE
Confidence 123566778888754444
No 75
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=94.14 E-value=0.17 Score=39.46 Aligned_cols=94 Identities=16% Similarity=0.135 Sum_probs=55.5
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEE-EEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA-RAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.+||||.|...+.+++.|. .|.+.. .....+.+ ...+..++.|.+ ++++. ++..|.||
T Consensus 4 riLGiDpG~~riGvAv~d~---------~g~~a~p~~~I~~~~---~r~~~~~~~l~~----li~~~-----~~~~ivVG 62 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE---------MGWTAQGIETIKINE---AEGDYGLSRLSE----LIKDY-----TIDKIVLG 62 (150)
T ss_dssp EEEEEEECSSEEEEEEECT---------TSSSEEEEEEEECBG---GGTBCCHHHHHH----HHTTS-----EEEEEEEE
T ss_pred EEEEEEccCCEEEEEEEEC---------CCCEEeeEEEEEcCC---cchHHHHHHHHH----HHHHc-----CCCEEEEe
Confidence 5899999999999999998 565443 22222211 001223344444 44332 57788899
Q ss_pred ccCCCCcc----H--HHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 026689 102 VSGVNHPT----D--QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (235)
Q Consensus 102 i~G~~~~~----~--~~~l~~~l~~~~~~~~~v~v~NDa~~a~~ 139 (235)
.|=..+.+ . ...+...|.+.++ .||...+-..+...
T Consensus 63 lP~~~nGt~~~~~~~ar~f~~~L~~~~~--lpV~~vDEr~Ts~~ 104 (150)
T 1vhx_A 63 FPKNMNGTVGPRGEASQTFAKVLETTYN--VPVVLWDERLTTMA 104 (150)
T ss_dssp CCCCBTTBCCHHHHHHHHHHHHHHHHHC--SCEEEECCSSCHHH
T ss_pred eeecCCcchhHHHHHHHHHHHHHHHhhC--CCEEEecCCCCHHH
Confidence 88222222 1 1345556666666 79988887765544
No 76
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=94.13 E-value=0.72 Score=41.09 Aligned_cols=92 Identities=18% Similarity=0.215 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHH-HcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-------CCC
Q 026689 74 RETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT-------MGK 145 (235)
Q Consensus 74 ~~~i~~~i~~~l~-~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~-------~g~ 145 (235)
|+.+.+.++.++. ..+..++ ...+.+..|-..+...+..+.+.+-+.++. ..+.+.|+..+|+++.+ .+.
T Consensus 86 ~d~~e~i~~~~~~~~L~~~~~-~~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~l~~ep~aa~~a~~~~~~~~~~~~ 163 (418)
T 1k8k_A 86 WDLMERFMEQVIFKYLRAEPE-DHYFLLTEPPLNTPENREYTAEIMFESFNV-PGLYIAVQAVLALAASWTSRQVGERTL 163 (418)
T ss_dssp HHHHHHHHHHHHHTTTCCCGG-GCCEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHGGGSTTCCSCCC
T ss_pred HHHHHHHHHHHHHhccCCCCC-CCcEEEEeCCCCCHHHHHHHHHHHHHhcCC-CEEEEechHHHHhhhhhcccccCCCCC
Confidence 4455566666664 3455553 345678888877666666777777566764 56899999999988632 344
Q ss_pred CCEEEEEeCCCceeEEEecCCcE
Q 026689 146 LHGCVLIAGTGTIAYGFTEDGRD 168 (235)
Q Consensus 146 ~~gi~li~GTGs~~~g~~~~G~~ 168 (235)
.++|+=+|.|..-...+.+|..
T Consensus 164 -~glVvDiG~gtt~v~~v~~G~~ 185 (418)
T 1k8k_A 164 -TGTVIDSGDGVTHVIPVAEGYV 185 (418)
T ss_dssp -CEEEEEESSSCEEEEEEETTEE
T ss_pred -eEEEEEcCCCceEEEEeECCEE
Confidence 7899999999765555667754
No 77
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=93.85 E-value=1.5 Score=36.06 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=67.3
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
.+|+||.-+..+-++|++ +++++.........+ .+.|...++++++++++++.+|.+|.++
T Consensus 3 ~iLaIdTS~~~~svAl~~----------~~~~~~~~~~~~~~H--------s~~L~p~i~~~L~~a~~~~~dld~Iav~- 63 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV----------NDQVISRSEVAPRDH--------TKKVLPMVDEVLKEAGLTLQDLDALAFG- 63 (213)
T ss_dssp CEEEEECSSSEEEEEEES----------SSCEEEEEEECCSCC--------HHHHHHHHHHHHHTTTCCTTTCSEEEEE-
T ss_pred EEEEEEccCcceEEEEEE----------CCEEEEEEEechHHH--------HHHHHHHHHHHHHHcCCCHHHccEEEEe-
Confidence 589999988889999987 467887764432222 2357788889999999999999998764
Q ss_pred cCCCCccH---HHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 026689 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (235)
Q Consensus 103 ~G~~~~~~---~~~l~~~l~~~~~~~~~v~v~NDa~~a~~ 139 (235)
.||.+-+. .....+-|.-.++ .|++-.|=-.+.+.
T Consensus 64 ~GPGsfTglRig~~~AkgLa~~~~--iPl~gVstL~a~a~ 101 (213)
T 3r6m_A 64 RGPGSFTGVRIGIGIAQGLAFGAE--LPMIGVSTLAAMAQ 101 (213)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHH
T ss_pred cCCCchhhHHHHHHHHHHHHHHhC--CCEEEEcCHHHHHH
Confidence 46655443 3445666666666 78887776654443
No 78
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=93.54 E-value=3.1 Score=38.54 Aligned_cols=133 Identities=14% Similarity=0.107 Sum_probs=78.3
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCc-----cCCHHHHHHHHHHHHHHHHHHcCCCccccee
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-----SVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (235)
++||||.-...+.++|++. ++++++.......... +.-...-.+.+..++++++++ +++++|.+
T Consensus 7 ~iL~i~ts~~~~~~al~~~---------~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ 75 (540)
T 3en9_A 7 ICLGLEGTAEKTGVGIVTS---------DGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDL 75 (540)
T ss_dssp EEEEEECSSSEEEEEEEET---------TSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCE
T ss_pred eEEEEEcCccceEEEEEEC---------CCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcE
Confidence 7999999999999999997 6688887654321100 111234466788888889887 77788999
Q ss_pred eEEeccCCCCccH---HHHHHHHHHhhCCCCceEEEeCcHHHHHHh---hcCCCCCEEEEEeCCCceeEEEecCCcEEE
Q 026689 98 VCLAVSGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALAS---GTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (235)
Q Consensus 98 igigi~G~~~~~~---~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~---~~~g~~~gi~li~GTGs~~~g~~~~G~~~~ 170 (235)
|+++. ||..... .....+.|...++ .|+.-.|=-.+=+++ +..-....++++.|..+-.. ...+|+...
T Consensus 76 ia~~~-gPG~~~~l~vg~~~ak~la~~~~--~p~~~v~h~~aH~~~~~~~~~~~~p~~l~vsGg~t~~~-~~~~~~~~~ 150 (540)
T 3en9_A 76 IAFSQ-GPGLGPSLRVTATVARTLSLTLK--KPIIGVNHCIAHIEIGKLTTEAEDPLTLYVSGGNTQVI-AYVSKKYRV 150 (540)
T ss_dssp EEEEE-ESSCHHHHHHHHHHHHHHHHHHT--CCEEEEEHHHHHHHHHHHHSSCSSCEEEEECSSCEEEE-EEETTEEEE
T ss_pred EEEec-CCCchhhHHHHHHHHHHHHHHhC--CCeeEeccHHHHHHHHHHhcCCCCCcEEEEcCCCcEEE-EEeCCceEE
Confidence 87643 4443222 3445556666665 677766654432222 11112235555666444222 234555443
No 79
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=93.42 E-value=0.15 Score=48.03 Aligned_cols=63 Identities=16% Similarity=0.130 Sum_probs=43.2
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCC
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSN 91 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (235)
|+++.|+|+|.|+|.+++.+..++ +-++++....+++.. .+.-.-+..+.+++++++++++..
T Consensus 1 m~~i~GiDIGnsttev~l~~~~~g------~i~~l~~g~~~ttGi--KGt~~Ni~g~~~si~~a~~~a~~~ 63 (607)
T 1nbw_A 1 MPLIAGIDIGNATTEVALASDYPQ------ARAFVASGIVATTGM--KGTRDNIAGTLAALEQALAKTPWS 63 (607)
T ss_dssp -CEEEEEEECSSEEEEEEEECBTT------BCCCCEEEEEECCSS--TTSGGGHHHHHHHHHHHHTTSSCC
T ss_pred CcEEEEEEecCceEEEEEEEEcCC------eEEEEEeecccCCcc--ceeeeCHHHHHHHHHHHHHHhCCc
Confidence 459999999999999999876211 457788888776654 233334445566666777776655
No 80
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=93.24 E-value=0.64 Score=40.73 Aligned_cols=89 Identities=16% Similarity=0.022 Sum_probs=55.0
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--CC-
Q 026689 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MG- 144 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~--~g- 144 (235)
.+++++..+.+.+.+..++ .+. .+..+.+++|...+......+++..+. .+. ..+.+.|+..+|+++.. ..
T Consensus 129 ~~~ei~a~~l~~l~~~a~~~~~~---~~~~~vitvP~~~~~~~r~~~~~a~~~-aGl-~~~~li~Ep~Aaa~~~~~~~~~ 203 (394)
T 3qfu_A 129 TPEEISGMILGKMKQIAEDYLGT---KVTHAVVTVPAYFNDAQRQATKDAGTI-AGL-NVLRIVNEPTAAAIAYGLDKSD 203 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHTTTTSCS
T ss_pred cHHHHHHHHHHHHHHHHHHhcCC---CcceEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEecCHHHHHHHHhhccCC
Confidence 4666666555555554333 232 456677999988776666666666643 553 56899999998887532 11
Q ss_pred -CCCEEEEEeCCCceeEEE
Q 026689 145 -KLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 145 -~~~gi~li~GTGs~~~g~ 162 (235)
....+++=+|.|..-..+
T Consensus 204 ~~~~vlV~D~Gggt~dvsv 222 (394)
T 3qfu_A 204 KEHQIIVYDLGGGTFDVSL 222 (394)
T ss_dssp SCEEEEEEEECSSCEEEEE
T ss_pred CCceEEEEEcCCCceeEEE
Confidence 223467778888754344
No 81
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=93.11 E-value=0.66 Score=40.85 Aligned_cols=138 Identities=17% Similarity=0.077 Sum_probs=80.7
Q ss_pred cccCCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCc-------cCCHHHHHHHHHHHHHHHHHHc
Q 026689 16 EESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-------SVGEDAARETIEKVMADALLKS 88 (235)
Q Consensus 16 ~~~~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~~ 88 (235)
|.+.++ .+.+||+|+.++|..|++.... +.-+++.+.+.... .. ..+ ++.+++..++++++.+..
T Consensus 11 ~~~~~~-~~A~IDiGSNsiRL~I~~~~~~-----~~~~~i~~~k~~vr-Lg~g~~~~g~ls-~eai~r~~~aL~~f~~~~ 82 (343)
T 3cer_A 11 MSKESV-TVAGIDCGTNSIRLKIARVDAD-----GMHEVVPRILRVIR-LGQDVDKTHRFA-DEALERAYVAAREFAGVI 82 (343)
T ss_dssp ---CCE-EEEEEEECSSCEEEEEEEEETT-----EEEEEEEEEEECCC-TTTTHHHHSSCC-HHHHHHHHHHHHHHHHHH
T ss_pred cCCCCC-eEEEEEcccceeEeEEEEEcCC-----CCEEEEEEEEEEee-CCCCccccCCcC-HHHHHHHHHHHHHHHHHH
Confidence 555544 6899999999999999996200 01234444443321 11 122 356677777777765543
Q ss_pred CC-CcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHH---HHhhc--C----CCCCEEEEEeCCCce
Q 026689 89 GS-NRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASGT--M----GKLHGCVLIAGTGTI 158 (235)
Q Consensus 89 ~~-~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a---~~~~~--~----g~~~gi~li~GTGs~ 158 (235)
.. ...++.. ++.+.+=+..+...+.+.+++.++ .++.|.+-.+=| +++.. . ...+++++=+|.||-
T Consensus 83 ~~~~v~~v~~--vATsA~R~A~N~~~fl~~v~~~tG--i~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGSt 158 (343)
T 3cer_A 83 AEHPIDGLRF--VATSATRDAENREEFEDEIERILG--VRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGST 158 (343)
T ss_dssp TTSCCSEEEE--EECHHHHHCTTHHHHHHHHHHHHS--SCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCE
T ss_pred HHCCCCeEEE--EecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCce
Confidence 21 2224444 566666444556678888888887 677776665522 33321 1 224689999999996
Q ss_pred eEEEecC
Q 026689 159 AYGFTED 165 (235)
Q Consensus 159 ~~g~~~~ 165 (235)
-..+..+
T Consensus 159 el~~~~~ 165 (343)
T 3cer_A 159 ELVIGGD 165 (343)
T ss_dssp EEEECCC
T ss_pred EEEEeec
Confidence 6555444
No 82
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=93.06 E-value=0.59 Score=47.13 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=58.5
Q ss_pred cEEEEEEcCc-----cceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccce
Q 026689 22 EVILGLDGGT-----TSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (235)
Q Consensus 22 ~~~LgiD~Gg-----T~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (235)
+.+||+|-|- |.++++++|. +|+++...+..+..+.....+...+ .+.+++.+. ++.
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~---------~G~~l~~~~i~~~~~~~~~~~~~~~----~l~~li~~~-----~~~ 580 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFED----TLDNIIQSC-----QPN 580 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECT---------TSCEEEEEEECSCTTCSSCCHHHHH----HHHHHHHHH-----CCS
T ss_pred CeEEEecCCCCCCCCCCeEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHHH----HHHHHHHHc-----CCc
Confidence 4689999983 3799999999 9999998887422211123334333 444455554 345
Q ss_pred eeEEeccCCCCccH--HHHHHHHHHhh-C----CCCceEEEeCcHHHHHHh
Q 026689 97 AVCLAVSGVNHPTD--QQRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (235)
Q Consensus 97 ~igigi~G~~~~~~--~~~l~~~l~~~-~----~~~~~v~v~NDa~~a~~~ 140 (235)
.|+||-. ...+. ...+.+.+.+. + +...++.+.||+-+-+|+
T Consensus 581 ~IaIGn~--s~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYs 629 (1030)
T 3psf_A 581 AIGINGP--NPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 629 (1030)
T ss_dssp EEEECCS--STHHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHH
T ss_pred EEEECCC--CHHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHH
Confidence 5556532 21222 22344444432 1 112689999999887764
No 83
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=92.55 E-value=1.5 Score=40.68 Aligned_cols=134 Identities=12% Similarity=0.057 Sum_probs=83.2
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCC---CCc---cCCHHHHHHHHHHHHHHH---HHHcCCCc
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS---NHN---SVGEDAARETIEKVMADA---LLKSGSNR 92 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~---l~~~~~~~ 92 (235)
+.+.+||+|+.++|..|++..++ ...++.+.+.... ... ..+ ++.+++..++++.+ ++..++
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~~------~~~~~~~~k~~vrLg~gl~~~g~Ls-~eai~r~~~~L~~F~~~~~~~~v-- 85 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLSR------APAVLFNEKVLCGLGKGLALTGRMH-EEGVTRALMALRRFHVLSEQAQA-- 85 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSSS------SCCEEEEEEEECCTTTTHHHHSSCC-HHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CeEEEEEECCccEEEEEEEEcCC------CceEEEEEeEEeecccCccccCCcC-HHHHHHHHHHHHHHHHHHHhCCC--
Confidence 46899999999999999997321 4556666543211 000 122 34556666666664 444544
Q ss_pred ccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHH---HHhhc--CCCCCEEEEEeCCCceeEEEecCCc
Q 026689 93 SAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASGT--MGKLHGCVLIAGTGTIAYGFTEDGR 167 (235)
Q Consensus 93 ~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a---~~~~~--~g~~~gi~li~GTGs~~~g~~~~G~ 167 (235)
+++.+ ++.+.+=+..+...+.+.+++.++ .++.|.+-.+=| .+|.. ....+++++=+|.||-=..+..+++
T Consensus 86 ~~v~~--vATsA~R~A~N~~~fl~~i~~~tG--~~ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~ 161 (508)
T 3hi0_A 86 QKLYV--LATAAAREAENGPDFIREAEAILG--CEIEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKS 161 (508)
T ss_dssp SEEEE--EECTHHHHSTTHHHHHHHHHHHHT--SCEEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTE
T ss_pred CeEEE--EeeHHHHcCcCHHHHHHHHHHHHC--CCeEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCe
Confidence 34554 566666445566677888888888 788887766533 22321 2334689999999996665555554
Q ss_pred E
Q 026689 168 D 168 (235)
Q Consensus 168 ~ 168 (235)
+
T Consensus 162 ~ 162 (508)
T 3hi0_A 162 C 162 (508)
T ss_dssp E
T ss_pred e
Confidence 3
No 84
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=92.55 E-value=3.8 Score=33.65 Aligned_cols=97 Identities=8% Similarity=-0.088 Sum_probs=67.9
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEe
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igig 101 (235)
.++|+||--+..+-++|++. ++++ ........ .-.+.|...++++++++++++.+|.+|+++
T Consensus 12 ~~iLaidTS~~~~sval~~~----------~~~l-~~~~~~~r-------~Hse~L~p~i~~~L~~a~~~~~dld~Iav~ 73 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRKG----------EDLF-EISYTGEK-------KHAEILPVVVKKLLDELDLKVKDLDVVGVG 73 (218)
T ss_dssp -CEEEEEECSSSEEEEEEET----------TEEE-EEEEESCG-------GGGGHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred ceEEEEEcCCcCeEEEEEEC----------CEEE-EEEecchH-------HHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 36999999999999999974 5677 33322111 112467788889999999999999998764
Q ss_pred ccCCCCccH---HHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 026689 102 VSGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (235)
Q Consensus 102 i~G~~~~~~---~~~l~~~l~~~~~~~~~v~v~NDa~~a~~ 139 (235)
.||.+-+. .....+-|...++ .|++-.|=-.+.++
T Consensus 74 -~GPGsfTGlRiG~~~Ak~La~~~~--iPl~gVs~l~a~a~ 111 (218)
T 2a6a_A 74 -IGPGGLTGLRVGIATVVGLVSPYD--IPVAPLNSFEMTAK 111 (218)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHGGGT--CCEEEECHHHHHHH
T ss_pred -cCCCchHhHHHHHHHHHHHHHHcC--CCEEEeCcHHHHHh
Confidence 57765443 3456667766676 79988886665554
No 85
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=92.45 E-value=0.78 Score=47.02 Aligned_cols=99 Identities=11% Similarity=0.122 Sum_probs=58.6
Q ss_pred cEEEEEEcCc-----cceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccce
Q 026689 22 EVILGLDGGT-----TSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (235)
Q Consensus 22 ~~~LgiD~Gg-----T~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (235)
+.+||+|-|- |.++++++|. +|+++...+..+..+.....+...+ .+.+++.+. ++.
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~---------~G~vl~~~~i~~~~~~~~~~~~a~~----~l~~li~~~-----~~~ 577 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFED----TLDNIIQSC-----QPN 577 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECT---------TSCEEEEEEECSCTTCSSCSHHHHH----HHHHHHHHH-----CCS
T ss_pred CeEEEecCCCCCCCCCceEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHHH----HHHHHHHHc-----CCc
Confidence 4689999984 3899999999 9999998887422211123334333 444455554 345
Q ss_pred eeEEeccCCCCccH--HHHHHHHHHhh-C----CCCceEEEeCcHHHHHHh
Q 026689 97 AVCLAVSGVNHPTD--QQRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (235)
Q Consensus 97 ~igigi~G~~~~~~--~~~l~~~l~~~-~----~~~~~v~v~NDa~~a~~~ 140 (235)
.|+||-. ...+. ...+.+.+.+. + +...++.+.||+-+-+++
T Consensus 578 vIaIGn~--sret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAsvYs 626 (1219)
T 3psi_A 578 AIGINGP--NPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 626 (1219)
T ss_dssp EEEECCS--STHHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHHHHH
T ss_pred EEEECCC--CHHHHHHHHHHHHHHHhhccccccCCCccEEEECchHHHHHh
Confidence 5556532 22222 12344444432 1 112689999999887765
No 86
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=91.81 E-value=0.24 Score=43.63 Aligned_cols=33 Identities=21% Similarity=0.068 Sum_probs=27.4
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeC
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (235)
|..++|+||-|+|++|+-+++. +|+++.+.+.+
T Consensus 5 ~~~~~IavDWGTSnlRa~l~~~---------~g~vl~~~~~~ 37 (330)
T 3t69_A 5 TAGYYAAVDWGTSSFRLWIIGE---------DGAVLAERRSA 37 (330)
T ss_dssp ---CEEEEEECSSCEEEEEECT---------TSCEEEEEEES
T ss_pred CCCCEEEEEecchheehheecC---------CCCchhhhcCC
Confidence 4457899999999999999998 89999988754
No 87
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=91.64 E-value=0.5 Score=44.50 Aligned_cols=70 Identities=20% Similarity=0.148 Sum_probs=47.7
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCccccee
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (235)
|+++.|||+|-+.|.+++.+..+ +++-+.++....+++... +..+-+.-+..++++++++.+.+.+++.-
T Consensus 1 m~~i~gvdign~tte~~la~~~~-----~~~~~f~~s~~~~ttg~k--gt~~n~~g~~~~l~~~~~~~~~~~~~~~l 70 (610)
T 2d0o_A 1 MRYIAGIDIGNSSTEVALATLDE-----AGALTITHSALAETTGIK--GTLRNVFGIQEALALVARGAGIAVSDISL 70 (610)
T ss_dssp CEEEEEEEECSSEEEEEEEEECT-----TCCEEEEEEEEEECCSST--TSTTHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CcEEEEEecCCcchheeeeeecC-----CCceEEeeccccccCCcc--CcHHHHHHHHHHHHHHHHHcCCChhhcee
Confidence 45899999999999988876521 012367888877766552 44444556777777888888877655443
No 88
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=91.06 E-value=5.2 Score=36.69 Aligned_cols=90 Identities=16% Similarity=0.035 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC---C
Q 026689 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---G 144 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~---g 144 (235)
++++++..+.+.+.+..++ .+. ++..+.+++|...+......+++..+ ..+. ..+.+.|+..+|+++-.. .
T Consensus 85 ~~~ei~a~~L~~l~~~ae~~l~~---~~~~~VitvPa~~~~~qr~a~~~a~~-~AGl-~~~~li~Ep~AAAlay~~~~~~ 159 (509)
T 2v7y_A 85 TPQEISAIILQYLKSYAEDYLGE---PVTRAVITVPAYFNDAQRQATKDAGR-IAGL-EVERIINEPTAAALAYGLDKEE 159 (509)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHHH-HTTC-EEEEEEEHHHHHHHHTTGGGSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHH-HcCC-CeEEEecCHHHHHHHHhhccCC
Confidence 5777776666555543322 232 35567789999876655566666654 3553 468999999988774321 1
Q ss_pred CCCEEEEEeCCCceeEEEe
Q 026689 145 KLHGCVLIAGTGTIAYGFT 163 (235)
Q Consensus 145 ~~~gi~li~GTGs~~~g~~ 163 (235)
....+++=+|.|..=..+.
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~ 178 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSIL 178 (509)
T ss_dssp SEEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEE
Confidence 2356778888887544443
No 89
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=90.85 E-value=1.4 Score=36.54 Aligned_cols=96 Identities=16% Similarity=0.072 Sum_probs=64.9
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEec
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi 102 (235)
++|+||.-+..+-++|++. ++++.+.......+ .+.+..+++++++++++++.+|.+|+++
T Consensus 2 ~iL~idTs~~~~sval~~~----------~~~~~~~~~~~~~h--------~~~l~~~i~~~L~~a~~~~~did~Iav~- 62 (231)
T 2gel_A 2 RILAIDTATEACSVALWNN----------GTINAHFELCPREH--------TQRILPMVQEILAASGASLNEIDALAFG- 62 (231)
T ss_dssp EEEEEECSSSEEEEEEEET----------TEEEEEEEECCSCC--------HHHHHHHHHHHHHHTTCCGGGCSEEEEE-
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEhhhhHHH--------HHHHHHHHHHHHHHcCCCHHHCCEEEEE-
Confidence 5899999888888999874 56766444322222 1357888889999999999999998764
Q ss_pred cCCCCccH---HHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 026689 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (235)
Q Consensus 103 ~G~~~~~~---~~~l~~~l~~~~~~~~~v~v~NDa~~a~~ 139 (235)
.|+.+-+. .....+-|...++ .|++-.|=-.+-+.
T Consensus 63 ~GPGsftglRig~~~ak~la~~~~--~Pl~~V~~l~a~a~ 100 (231)
T 2gel_A 63 RGPGSFTGVRIGIGIAQGLALGAN--LPMIGVSTLATMAQ 100 (231)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHTTT--CCEEEECHHHHHHH
T ss_pred cCCChhHhHHHHHHHHHHHHHHcC--CCEEEeccHHHHHH
Confidence 46654432 2345555655555 78887776554433
No 90
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=89.66 E-value=2 Score=37.55 Aligned_cols=90 Identities=16% Similarity=0.028 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHHHHH-HHcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC---
Q 026689 69 GEDAARETIEKVMADAL-LKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l-~~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g--- 144 (235)
.++++...+.+.+.+.. ...+. ++..+.+++|...+......+.+.++. .+. ..+.+.++..+|+++....
T Consensus 111 ~~~~i~~~~L~~l~~~a~~~~~~---~~~~~vitvP~~~~~~~r~~~~~a~~~-aGl-~~~~li~Ep~Aaa~~~~~~~~~ 185 (383)
T 1dkg_D 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATKDAGRI-AGL-EVKRIINEPTAAALAYGLDKGT 185 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSS---CCCEEEECBCTTCCHHHHHHHHHHHHH-TTC-EESCCCBHHHHHHHHHTCCC-C
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEeccHHHHHHHHHhccCC
Confidence 45666555544443332 22232 345677899987666555666666544 453 4567899999887753222
Q ss_pred -CCCEEEEEeCCCceeEEEe
Q 026689 145 -KLHGCVLIAGTGTIAYGFT 163 (235)
Q Consensus 145 -~~~gi~li~GTGs~~~g~~ 163 (235)
....+++=+|.|..-..+.
T Consensus 186 ~~~~~lVvD~Gggttdvsv~ 205 (383)
T 1dkg_D 186 GNRTIAVYDLGGGTFDISII 205 (383)
T ss_dssp CEEEEEEEEECSSCEEEEEE
T ss_pred CCcEEEEEEcCCCeEEEEEE
Confidence 1346777888887544443
No 91
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=89.49 E-value=8.9 Score=35.42 Aligned_cols=92 Identities=16% Similarity=0.067 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHH-cCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEEE
Q 026689 74 RETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLI 152 (235)
Q Consensus 74 ~~~i~~~i~~~l~~-~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~li 152 (235)
|+.+...++.++.+ .++.+.+-..+.+..|-......+..+.+.+-+.|+. ..+++.+.+.+++++. |...++||=
T Consensus 92 wd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~v-pav~l~~~~vlalya~--G~~tglVVD 168 (498)
T 3qb0_A 92 WDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQF-EACYLAPTSTCVSFAA--GRPNCLVVD 168 (498)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCC-SEEEEEEHHHHHHHHH--TCSSEEEEE
T ss_pred HHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCC-CeEeecchHHHHHHHc--CCCeEEEEE
Confidence 56666777766643 4554433214556666555555666777777666774 5799999999998864 446799999
Q ss_pred eCCCceeEEEecCCcE
Q 026689 153 AGTGTIAYGFTEDGRD 168 (235)
Q Consensus 153 ~GTGs~~~g~~~~G~~ 168 (235)
+|.|.--..-+.+|..
T Consensus 169 iG~g~T~vvPI~~G~~ 184 (498)
T 3qb0_A 169 IGHDTCSVSPIVDGMT 184 (498)
T ss_dssp ECSSCEEEEEEETTEE
T ss_pred cCCCcEEEEEEeCCEE
Confidence 9999754444556643
No 92
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=89.49 E-value=7.5 Score=34.00 Aligned_cols=90 Identities=14% Similarity=0.066 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC----
Q 026689 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---- 143 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~---- 143 (235)
.++++...+...+++..++ .+. ++..+++++|...+...+..+++..+. .+. ..+.+.++..+|+++...
T Consensus 134 ~~~ei~a~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~~~~r~~~~~a~~~-AGl-~~~~li~Ep~AAa~~~~~~~~~ 208 (404)
T 3i33_A 134 FPEEISSMVLTKMKEIAEAYLGG---KVHSAVITVPAYFNDSQRQATKDAGTI-TGL-NVLRIINEPTAAAIAYGLDKKG 208 (404)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSS---CCCEEEEEECTTCCHHHHHHHHHHHHH-HTC-EEEEEEEHHHHHHHHTTTTSSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhcc---CCCcEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEEEeccHHHHHHHHHhhccc
Confidence 4566665555555554432 222 356678999988776666666666544 343 568999999988875321
Q ss_pred ---CCCCEEEEEeCCCceeEEEe
Q 026689 144 ---GKLHGCVLIAGTGTIAYGFT 163 (235)
Q Consensus 144 ---g~~~gi~li~GTGs~~~g~~ 163 (235)
.....+++=+|.|..-..+.
T Consensus 209 ~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 209 CAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp SSSSCCEEEEEEECSSCEEEEEE
T ss_pred ccCCCceEEEEECCCCcEEEEEE
Confidence 22335677788887544443
No 93
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=88.79 E-value=11 Score=35.36 Aligned_cols=89 Identities=16% Similarity=0.047 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--C--
Q 026689 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--M-- 143 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~--~-- 143 (235)
.|+++...+...+.+..+. .+. .+..++|.+|...+...+..+++..+. .+. ..+.+.|+..+|+++.. .
T Consensus 111 ~p~ei~a~iL~~lk~~ae~~lg~---~v~~~VITVPa~f~~~qr~a~~~Aa~~-AGl-~v~~li~EP~AAAlaygl~~~~ 185 (605)
T 4b9q_A 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATKDAGRI-AGL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEeCcHHHHHHHhhhhccC
Confidence 4566655555555444332 233 456778999988776665566666544 343 46899999998877532 1
Q ss_pred CCCCEEEEEeCCCceeEEE
Q 026689 144 GKLHGCVLIAGTGTIAYGF 162 (235)
Q Consensus 144 g~~~gi~li~GTGs~~~g~ 162 (235)
.....+++=+|.|..=..+
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi 204 (605)
T 4b9q_A 186 GNRTIAVYDLGGGAFDISI 204 (605)
T ss_dssp SSEEEEEEEECSSCEEEEE
T ss_pred CCCEEEEEECCCCeEEEEE
Confidence 1234567778888754444
No 94
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=86.29 E-value=7.5 Score=34.14 Aligned_cols=128 Identities=14% Similarity=0.037 Sum_probs=68.5
Q ss_pred cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEE-----EEeCC-CCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 026689 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR-----AAAGC-SNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~-----~~~~~-~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (235)
++++.||+|++++|+.|++.... +...++.+ .+..+ ......+++.+-+.+. ++.+.......+|
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~-----~~~~~i~~~~~~~~k~~~gLs~~~~~~~~~~~~l~----~f~~~~~~~~~~v 73 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTD-----DTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLT----MLLADAPIHNIPV 73 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEC-----TTSCEEEEEEEEEEEESSCGGGSCCSHHHHHHHHH----HHHTTCSCCSEEE
T ss_pred CEEEEEEcCCCCeEEEEEEEcCC-----CCCceeEeeeeeeeccCCChhhcCCCHHHHHHHHH----HHHHHHhcCCCcE
Confidence 47899999999999999986211 02345554 22221 1111234555443333 3333111222233
Q ss_pred eeeEEeccCCCCccH--HHHHHHHHHhhC-------CCCceEEEeCcHHHHHH---hh--cC------CCCCEEEEEeCC
Q 026689 96 RAVCLAVSGVNHPTD--QQRILNWLRDIF-------PGNVRLYVHNDALAALA---SG--TM------GKLHGCVLIAGT 155 (235)
Q Consensus 96 ~~igigi~G~~~~~~--~~~l~~~l~~~~-------~~~~~v~v~NDa~~a~~---~~--~~------g~~~gi~li~GT 155 (235)
. .++.+|+=...+ ...+.+.+++.+ + .++.|..-.+=|.+ +. .. ..+...++=+|-
T Consensus 74 ~--~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g--~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGG 149 (353)
T 3aap_A 74 Y--FYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQL--VEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGG 149 (353)
T ss_dssp E--EEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEE--EEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECS
T ss_pred E--EEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCC--CeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCC
Confidence 3 357777733333 556666666666 4 57777766653322 21 11 112488999999
Q ss_pred CceeEEE
Q 026689 156 GTIAYGF 162 (235)
Q Consensus 156 Gs~~~g~ 162 (235)
||-=..+
T Consensus 150 GStei~~ 156 (353)
T 3aap_A 150 ASVQIVF 156 (353)
T ss_dssp SEEEEEE
T ss_pred CceEEEE
Confidence 9854444
No 95
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=85.57 E-value=26 Score=33.45 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHHHHH-HcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhh-c-C--
Q 026689 69 GEDAARETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-T-M-- 143 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~-~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~-~-~-- 143 (235)
.|+++...+..-+.+..+ ..+. .+..+++++|...+......+++..+. .+. ..+.+.|+..+|+++- . .
T Consensus 114 speei~a~~L~~lk~~ae~~lg~---~v~~~VITVPa~f~~~qR~a~~~Aa~~-AGl-~~~~li~EP~AAAlaygl~~~~ 188 (675)
T 3d2f_A 114 SATQLAAMFIDKVKDTVKQDTKA---NITDVCIAVPPWYTEEQRYNIADAARI-AGL-NPVRIVNDVTAAGVSYGIFKTD 188 (675)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHHHHHCSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CcceEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEEcchHHHHHHHhhhccc
Confidence 456665555554444322 2332 456778999988776665566666544 453 5689999999887642 1 1
Q ss_pred ------CCCCEEEEEeCCCceeEEEec--CCcE
Q 026689 144 ------GKLHGCVLIAGTGTIAYGFTE--DGRD 168 (235)
Q Consensus 144 ------g~~~gi~li~GTGs~~~g~~~--~G~~ 168 (235)
.....+|+=+|.|..-..+.. +|.+
T Consensus 189 ~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~ 221 (675)
T 3d2f_A 189 LPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL 221 (675)
T ss_dssp CCCSSSCCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred cccccCCCcEEEEEEcCCCcEEEEEEEecCCeE
Confidence 123466778888875544433 4543
No 96
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=84.93 E-value=2.8 Score=32.72 Aligned_cols=55 Identities=15% Similarity=0.065 Sum_probs=38.4
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCC---EEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcC
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP---VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSG 89 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~---il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~ 89 (235)
.+||||-|.+.|=+++++. +|+ .+......+. . .+..+-+..|.+.+.+++.+..
T Consensus 2 ~ILGIDPGl~~tG~gvi~~---------~g~~~~~v~~G~i~t~--~-~~~~~Rl~~i~~~l~~~i~~~~ 59 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQ---------VGRQLSYLGSGCIRTK--V-DDLPSRLKLIYAGVTEIITQFQ 59 (158)
T ss_dssp EEEEEECCSSEEEEEEEEE---------ETTEEEEEEEEEEECC--C-SCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEccCCCCeeEEEEEe---------cCCeEEEEEeeEEECC--C-CCHHHHHHHHHHHHHHHHHHcC
Confidence 4899999999999999997 454 3333333332 1 3556666777788888887765
No 97
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=84.57 E-value=2.2 Score=36.82 Aligned_cols=32 Identities=13% Similarity=0.024 Sum_probs=27.4
Q ss_pred CCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeC
Q 026689 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (235)
Q Consensus 20 m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (235)
|+.++++||-|+|++|+-+++. |+++.+.+.+
T Consensus 4 m~~~~IavDWGTs~lRa~l~~~----------g~vl~~~~~~ 35 (295)
T 3nuw_A 4 MTARYIAIDWGSTNLRAWLYQG----------EECLESRQSE 35 (295)
T ss_dssp GGCEEEEEEECSSCEEEEEEET----------TEEEEEEEES
T ss_pred CCccEEEEEecchheeeeeecC----------CceehhhcCC
Confidence 5668999999999999999984 6899888764
No 98
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=83.70 E-value=6.4 Score=30.96 Aligned_cols=56 Identities=18% Similarity=0.115 Sum_probs=39.5
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCC------EEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcC
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP------VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSG 89 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~------il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~ 89 (235)
.+||||-|.+.|=+++++. +++ .+......+.. ..+..+-+..|.+.+.+++++..
T Consensus 2 rILGIDPGl~~tG~gvi~~---------~g~~~~~~~~v~~G~I~t~~--~~~~~~RL~~I~~~l~~~i~~~~ 63 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV---------EGKGALKARLLHGEVVKTSP--QEPAKERVGRIHARVLEVLHRFR 63 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE---------CSSSSSCEEEEEEEEEECCT--TSCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEccccCceEEEEEEe---------cCCccceEEEEEeCeEECCC--CCCHHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999998 444 34333333322 24566777788888888887764
No 99
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=81.32 E-value=16 Score=34.32 Aligned_cols=90 Identities=16% Similarity=0.042 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC---
Q 026689 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g--- 144 (235)
.|+++...+.+-+.+..+. .+. ++..+++++|...+......+++..+. .+. ..+.+.|+..+|+++-...
T Consensus 111 ~~~ei~a~~L~~l~~~ae~~l~~---~v~~~VitVPa~f~d~qr~a~~~A~~~-AGl-~v~~li~EP~AAAlay~l~~~~ 185 (605)
T 2kho_A 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATKDAGRI-AGL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTTCCHHHHHHHHHHHHT-TTC-EEEEEEEHHHHHHHHTTTTSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHhCC---CCcEEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEecCHHHHHHHhhhcccC
Confidence 4666655555544443322 232 456677899998766555566666543 453 4689999999987753211
Q ss_pred -CCCEEEEEeCCCceeEEEe
Q 026689 145 -KLHGCVLIAGTGTIAYGFT 163 (235)
Q Consensus 145 -~~~gi~li~GTGs~~~g~~ 163 (235)
....+++=+|.|..=..+.
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 2kho_A 186 GNRTIAVYDLGGGTFDISII 205 (605)
T ss_dssp SEEEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEE
Confidence 2235677888887544443
No 100
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=80.33 E-value=12 Score=33.50 Aligned_cols=69 Identities=17% Similarity=0.067 Sum_probs=40.4
Q ss_pred CCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCC-CccCCHHHHHHHHHHHHHHHHHHcCCCc--ccc
Q 026689 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-HNSVGEDAARETIEKVMADALLKSGSNR--SAV 95 (235)
Q Consensus 19 ~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~~~~~~--~~i 95 (235)
.|+ .+|.|..|.|++|+.|++.. +.+++.+....... ....+-.+.++.+.+. +.+.++.. ++|
T Consensus 21 ~m~-~ILviN~GSSS~K~~l~~~~--------~~~~l~~g~~e~ig~~~~~dh~~a~~~il~~----L~~~~~~~~~~~i 87 (398)
T 4ijn_A 21 SMV-TVLVVNSGSSSLKYAVVRPA--------SGEFLADGIIEEIGSGAVPDHDAALRAAFDE----LAAAGLHLEDLDL 87 (398)
T ss_dssp -CC-EEEEEEECSSCEEEEEECTT--------TCCEEEEEEECSTTBTTBCSHHHHHHHHHHH----HHHTTCCGGGSCE
T ss_pred ccc-cEEEEeCCchhheEEEEECC--------CCceeeeeeeeecCCCCccCHHHHHHHHHHH----HHHcCCCccccce
Confidence 344 58999999999999999962 44577766543211 0112344444444443 33444433 467
Q ss_pred eeeEE
Q 026689 96 RAVCL 100 (235)
Q Consensus 96 ~~igi 100 (235)
.+||.
T Consensus 88 ~aVGh 92 (398)
T 4ijn_A 88 KAVGH 92 (398)
T ss_dssp EEEEE
T ss_pred eEEec
Confidence 77753
No 101
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=79.85 E-value=1.6 Score=37.59 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=21.4
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEE
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR 57 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~ 57 (235)
+.+|||+|+|.+|+++++ +++++..
T Consensus 21 ~~iGIDiGsTt~K~V~~~----------~~~i~~~ 45 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQ----------DNQRTFK 45 (287)
T ss_dssp CEEEEEECSSEEEEEEEC----------SSCEEEE
T ss_pred eEEEEEEChhhEEEEEEc----------CCEEEEE
Confidence 789999999999999985 5677765
No 102
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=78.95 E-value=26 Score=32.28 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCcccce--eeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCC
Q 026689 70 EDAARETIEKVMADALL-KSGSNRSAVR--AVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKL 146 (235)
Q Consensus 70 ~~~~~~~i~~~i~~~l~-~~~~~~~~i~--~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~ 146 (235)
..+.|+.+...++.++. +.++++++.. .+.+-.|-.........+.+.|=+.|+. ..+++.+++.+++++. |..
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~-pa~~~~~~~vla~ya~--G~~ 246 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGF-SGIVVHQESVCATYGS--GLS 246 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHHH--TCS
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCC-CeEEeechHHHHHHHC--CCC
Confidence 56789999999998885 4677776542 3557777777666677777777777874 5699999999999864 556
Q ss_pred CEEEEEeCCCceeEEEecCCcE
Q 026689 147 HGCVLIAGTGTIAYGFTEDGRD 168 (235)
Q Consensus 147 ~gi~li~GTGs~~~g~~~~G~~ 168 (235)
.++||=+|-+.--..-+.||..
T Consensus 247 tglVVDiG~~~T~v~PV~dG~~ 268 (593)
T 4fo0_A 247 STCIVDVGDQKTSVCCVEDGVS 268 (593)
T ss_dssp EEEEEEECSSCEEEEEEESSCB
T ss_pred ceEEEEeCCCceeeeeeECCEE
Confidence 8999999998644444567754
No 103
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=78.85 E-value=0.82 Score=40.64 Aligned_cols=92 Identities=16% Similarity=0.226 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHH--HHcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCEEEE
Q 026689 74 RETIEKVMADAL--LKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVL 151 (235)
Q Consensus 74 ~~~i~~~i~~~l--~~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g~~~gi~l 151 (235)
|+.+.+.++.++ +..+..+.+ ..+.+..|-.........+.+.+-+.|+. ..+++.++..+++++. |...++||
T Consensus 82 wd~~e~i~~~~~~~~~L~~~~~~-~~vllt~p~~~~~~~r~~~~e~~fe~~~~-~~~~~~~~~~~a~~a~--g~~~~lVV 157 (394)
T 1k8k_B 82 WDDMKHLWDYTFGPEKLNIDTRN-CKILLTEPPMNPTKNREKIVEVMFETYQF-SGVYVAIQAVLTLYAQ--GLLTGVVV 157 (394)
T ss_dssp ----------------------------------------------------------------------------CCEE
T ss_pred HHHHHHHHHHHhcccccCcCCCC-CcEEEEECCCCCHHHHHHHHHHhhhccCC-CeEEEEhhHHHHHHhC--CCceEEEE
Confidence 444555555555 333333332 22445556555444445566655455653 4589999999888753 44678999
Q ss_pred EeCCCceeEEEecCCcEE
Q 026689 152 IAGTGTIAYGFTEDGRDA 169 (235)
Q Consensus 152 i~GTGs~~~g~~~~G~~~ 169 (235)
=+|.|.--...+.+|...
T Consensus 158 DiG~g~T~v~pv~~G~~~ 175 (394)
T 1k8k_B 158 DSGDGVTHICPVYEGFSL 175 (394)
T ss_dssp EECSSCEEEECEETTEEC
T ss_pred EcCCCceEeeeeECCEEc
Confidence 999997554445677543
No 104
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=74.52 E-value=35 Score=30.52 Aligned_cols=93 Identities=19% Similarity=0.250 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHH-HcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC------CCC
Q 026689 74 RETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM------GKL 146 (235)
Q Consensus 74 ~~~i~~~i~~~l~-~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~------g~~ 146 (235)
|+.+.+.++.++. ..++.+++ ..+.+..|-...+..+..+.+.+=+.|+. ..+++.+++.+++++... +..
T Consensus 102 wd~~e~iw~~~~~~~L~v~~~~-~pvlltep~~~~~~~re~~~ei~FE~~~~-p~v~l~~~~vla~~a~G~~~~~~~~~~ 179 (427)
T 3dwl_A 102 WDHMERFWQQSLFKYLRCEPED-HYFLLTEPPLNPPENRENTAEIMFESFNC-AGLYIAVQAVLALAASWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHHHHTTSCCCGGG-CEEEEEECTTCCHHHHHHHHHHHTTTTCC-SEEEEEEHHHHHHHGGGGSTTTCSCCC
T ss_pred HHHHHHHHHHHHhHhhCCCCcC-CcEEEEcCCCCCHHHHHHHHHHHHHhccC-ceeeecchHHHHHHhcCCcccccCCCc
Confidence 5666666666653 34555543 35566666666566667777777666774 569999999999886532 145
Q ss_pred CEEEEEeCCCceeEEEecCCcE
Q 026689 147 HGCVLIAGTGTIAYGFTEDGRD 168 (235)
Q Consensus 147 ~gi~li~GTGs~~~g~~~~G~~ 168 (235)
.++||=+|-|.--..-+.+|..
T Consensus 180 tglVVDiG~g~T~v~PV~~G~~ 201 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVAEGYV 201 (427)
T ss_dssp CEEEEEESSSCEEEEEEETTEE
T ss_pred eEEEEECCCCceEEEEEECCEE
Confidence 7999999999754444567754
No 105
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=74.16 E-value=4.3 Score=36.74 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=23.5
Q ss_pred cccCCC-cEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEE
Q 026689 16 EESGGR-EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA 58 (235)
Q Consensus 16 ~~~~m~-~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~ 58 (235)
|++.|. +++|.|..|.|++|+.|++.. +.+++.+.
T Consensus 12 m~~~Ms~klILviN~GSSS~K~~lf~~~--------~~~~l~~G 47 (415)
T 3sk3_A 12 MASHMSSKLVLVLNCGSSSLKFAIIDAV--------NGDEYLSG 47 (415)
T ss_dssp ------CCEEEEEEECSSCEEEEEEETT--------TCCEEEEE
T ss_pred ccccCCCCeEEEEeCchHhhhheeEECC--------CCCEEEEe
Confidence 677775 589999999999999999952 55666553
No 106
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=74.05 E-value=36 Score=32.49 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHHHHHHHH--HcCCCccc--ceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC
Q 026689 69 GEDAARETIEKVMADALL--KSGSNRSA--VRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG 144 (235)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~--~~~~~~~~--i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~g 144 (235)
..++.|+.+...++.++. +.++.+++ =..+.+..|-.........+.+.+=+.|+. ..+++.+++.+++++. |
T Consensus 191 s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgv-pavyl~~qavlAlyas--G 267 (655)
T 4am6_A 191 SLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQF-QAVAIIQESLATCYGA--G 267 (655)
T ss_dssp SHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHS--C
T ss_pred cccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCC-CeeeeccHHHHHHHhC--C
Confidence 467789999999998886 56666642 134556677666666667777777777874 5789999999988864 4
Q ss_pred -CCCEEEEEeCCCceeEEEecCCcE
Q 026689 145 -KLHGCVLIAGTGTIAYGFTEDGRD 168 (235)
Q Consensus 145 -~~~gi~li~GTGs~~~g~~~~G~~ 168 (235)
...++||-+|.|.--..-+.+|..
T Consensus 268 l~ttGLVVDiG~g~T~VvPV~eG~v 292 (655)
T 4am6_A 268 ISTSTCVVNIGAAETRIACVDEGTV 292 (655)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEE
T ss_pred CCCceEEEcCCCceEEEEEEeCCEE
Confidence 357999999999754444567743
No 107
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=73.68 E-value=19 Score=32.51 Aligned_cols=37 Identities=24% Similarity=0.218 Sum_probs=25.2
Q ss_pred cccCCCcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEe
Q 026689 16 EESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAA 60 (235)
Q Consensus 16 ~~~~m~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~ 60 (235)
|.+.-.+.+|.|..|.|++|+.|++.. +.+++.+...
T Consensus 12 ~~~~~~~~ILviN~GSSS~K~~lf~~~--------~~~~l~~g~i 48 (415)
T 2e1z_A 12 MASNEFPVVLVINCGSSSIKFSVLDVA--------TCDVLMAGIA 48 (415)
T ss_dssp -----CCEEEEEEECSSEEEEEEEETT--------TCCEEEEEEE
T ss_pred cccCCCCeEEEEECCchhheEEEEECC--------CCCEEEEEEE
Confidence 444434579999999999999999962 3566766644
No 108
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=72.30 E-value=9.6 Score=34.79 Aligned_cols=141 Identities=11% Similarity=0.023 Sum_probs=71.4
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEE---EEe--CCCCCccCCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR---AAA--GCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~---~~~--~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (235)
.+|.+.||+|.|++|+.|+..... .+. .-.++.+ .+. +.......+|+.+.+.|..+++.+....+......
T Consensus 33 ~~y~iviDaGSsgtRl~VY~~~~~-~~~--~~~~~~~~~~~k~~gpGlSs~~~~p~~~~~~l~~Ll~~a~~~vp~~~~~~ 109 (452)
T 3zx3_A 33 VKYGIVLDAGSSHTNLYIYKWPAE-KEN--DTGVVQQLEECQVKGPGISKYAQKTDEIAAYLAECMKMSTERIPASKQHQ 109 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEEEECC-CTT--CCCCCEEEEEEECSSSCGGGGTTCGGGHHHHHHHHHHHHHHHSCHHHHTT
T ss_pred ceEEEEEEcCCCCcEEEEEEEeCC-cCC--CccccceeeeecccCCChhccCCCHHHHHHHHHHHHHHHHHhCCHHHcCC
Confidence 458899999999999999987321 000 1112222 122 22111234778888888888777664322111112
Q ss_pred eee-EEeccCCCC-----ccHHHHHHHHHHhhC---CC-CceEEEeCcHHHHHH---hh--cCC------CCCEEEEEeC
Q 026689 96 RAV-CLAVSGVNH-----PTDQQRILNWLRDIF---PG-NVRLYVHNDALAALA---SG--TMG------KLHGCVLIAG 154 (235)
Q Consensus 96 ~~i-gigi~G~~~-----~~~~~~l~~~l~~~~---~~-~~~v~v~NDa~~a~~---~~--~~g------~~~gi~li~G 154 (235)
.-| .++.+|+-. +.....+.+.+++.+ |. ...+.|....+=+.+ +. ..+ .....+|=+|
T Consensus 110 tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlG 189 (452)
T 3zx3_A 110 TPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLG 189 (452)
T ss_dssp CEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEEC
T ss_pred ccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecC
Confidence 222 256666621 112334444444443 21 025777776653332 21 111 2355678888
Q ss_pred CCceeEEEec
Q 026689 155 TGTIAYGFTE 164 (235)
Q Consensus 155 TGs~~~g~~~ 164 (235)
-||-=..+..
T Consensus 190 GgStQi~f~~ 199 (452)
T 3zx3_A 190 GASTQITFVP 199 (452)
T ss_dssp SSEEEEEECC
T ss_pred CCceEEEecc
Confidence 8884334433
No 109
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=66.52 E-value=11 Score=29.10 Aligned_cols=37 Identities=14% Similarity=0.230 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEeccC
Q 026689 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSG 104 (235)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi~G 104 (235)
-.++++++...+++.+++++.++.+++|..|.|.++-
T Consensus 44 Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT~ 80 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVTK 80 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 4689999999999999999999999999999887654
No 110
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=65.40 E-value=10 Score=34.56 Aligned_cols=138 Identities=12% Similarity=0.090 Sum_probs=71.5
Q ss_pred CcEEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEE---Ee--CCCCCccCCHHHHHHHHHHHHHHHHHH-----cCC
Q 026689 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA---AA--GCSNHNSVGEDAARETIEKVMADALLK-----SGS 90 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~---~~--~~~~~~~~~~~~~~~~i~~~i~~~l~~-----~~~ 90 (235)
.+|.+.||+|++++|+.|++..... . + .-.++.+. +. +.......+++.+.+.|..+++.+... .+.
T Consensus 33 ~~y~~vID~GSns~Rl~Vy~~~~~~-~-~-~~~~~~~~~~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~~~iP~~~~~~ 109 (456)
T 3cj1_A 33 LKYGIVLDAGSSHTSMFVYKWPADK-E-N-DTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHAS 109 (456)
T ss_dssp EEEEEEEEECSSCEEEEEEEEETTS-T-T-STTCCEEEEEEECSSSCGGGGTTSTHHHHHHTHHHHHHHHHHSCHHHHTT
T ss_pred ceEEEEEEcCCCCeEEEEEEEcCCC-C-C-CccceeeeeeeeecccccccccCCHHHHHHHHHHHHHHHHHhCCHHHcCC
Confidence 4589999999999999999862110 0 0 00122221 22 111111246777777777777776532 222
Q ss_pred CcccceeeEEeccCCCCc-----cHHHHHHHHHHhhCCC-C---ceEEEeCcHHHHHH---hh--cCC------------
Q 026689 91 NRSAVRAVCLAVSGVNHP-----TDQQRILNWLRDIFPG-N---VRLYVHNDALAALA---SG--TMG------------ 144 (235)
Q Consensus 91 ~~~~i~~igigi~G~~~~-----~~~~~l~~~l~~~~~~-~---~~v~v~NDa~~a~~---~~--~~g------------ 144 (235)
. +|. .++.+|+=.. .....+.+.+++.++. . ..+.|..-.+=|.+ +. ..+
T Consensus 110 t--~v~--~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~ 185 (456)
T 3cj1_A 110 T--PLY--LGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWI 185 (456)
T ss_dssp C--EEE--EEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEEC
T ss_pred c--eEE--EEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhccccccccccccc
Confidence 2 233 2566776221 2344555666665531 0 25666665542222 11 011
Q ss_pred ---CCCEEEEEeCCCceeEEEecC
Q 026689 145 ---KLHGCVLIAGTGTIAYGFTED 165 (235)
Q Consensus 145 ---~~~gi~li~GTGs~~~g~~~~ 165 (235)
.....++=+|-||-=..+..+
T Consensus 186 ~~~~~t~gvlDlGGgStqi~~~~~ 209 (456)
T 3cj1_A 186 RPRKGTLGAMDLGGASTQITFETT 209 (456)
T ss_dssp SSCCCCCEEEEECSSEEEEEEECC
T ss_pred ccCCCceEEEEcCCCceEEEeccC
Confidence 234677889999843444333
No 111
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=63.94 E-value=13 Score=28.04 Aligned_cols=37 Identities=8% Similarity=0.145 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEeccC
Q 026689 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSG 104 (235)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi~G 104 (235)
-.++++++...+++.+++++.++.+++|..|.|.++-
T Consensus 15 Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T~ 51 (127)
T 1dbf_A 15 DTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSATP 51 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 4689999999999999999999999999999887654
No 112
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=60.42 E-value=51 Score=28.18 Aligned_cols=20 Identities=35% Similarity=0.321 Sum_probs=17.6
Q ss_pred cEEEEEEcCccceEEEEEeC
Q 026689 22 EVILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~ 41 (235)
..++.+|+|+..|.+.++..
T Consensus 191 ~~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 191 RVFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp CEEEEEEECSSCEEEEEEET
T ss_pred CeEEEEEECCCcEEEEEEEC
Confidence 35799999999999999974
No 113
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=59.82 E-value=16 Score=27.25 Aligned_cols=38 Identities=16% Similarity=0.211 Sum_probs=33.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCc-ccceeeEEeccCC
Q 026689 68 VGEDAARETIEKVMADALLKSGSNR-SAVRAVCLAVSGV 105 (235)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~~~~~-~~i~~igigi~G~ 105 (235)
-.++++++...+++.+++++.++.+ ++|..|.|.++-=
T Consensus 14 n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T~D 52 (122)
T 1ufy_A 14 DTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVTED 52 (122)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeCCc
Confidence 4689999999999999999999999 9999998876543
No 114
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=57.37 E-value=59 Score=29.01 Aligned_cols=66 Identities=15% Similarity=0.055 Sum_probs=40.5
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCC---CccCCHHHHHHHHHHHHHHHHHHcCCC--ccccee
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN---HNSVGEDAARETIEKVMADALLKSGSN--RSAVRA 97 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~~ 97 (235)
.+|.|..|.+++|+.|++.. +.+++++....... ....+-.++++.+.+.+. +.+.. .++|.+
T Consensus 13 ~iLviN~GSSSlK~~l~~~~--------~~~~l~~G~~e~ig~~~~~~~~h~~a~~~il~~L~----~~~~~~~~~~i~a 80 (391)
T 3r9p_A 13 RVLVINSGSSSLKFQLVDPE--------FGVAASTGIVERIGEESSPVPDHDAALRRAFDMLA----GDGVDLNTAGLVA 80 (391)
T ss_dssp EEEEEEECSSCEEEEEEETT--------TTEEEEEEEECCTTCTTCSCCSHHHHHHHHHHHHH----HTTCCTTTTTEEE
T ss_pred eEEEEecCchhheeEEEecC--------CCceEEEEEEeecCCCccCccCHHHHHHHHHHHHH----hcCCCCcccceeE
Confidence 48999999999999999962 55677776554211 111344555555554433 34432 247888
Q ss_pred eEE
Q 026689 98 VCL 100 (235)
Q Consensus 98 igi 100 (235)
||.
T Consensus 81 VGh 83 (391)
T 3r9p_A 81 VGH 83 (391)
T ss_dssp EEE
T ss_pred Eec
Confidence 753
No 115
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=46.27 E-value=10 Score=35.25 Aligned_cols=94 Identities=14% Similarity=0.045 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC-----
Q 026689 70 EDAARETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM----- 143 (235)
Q Consensus 70 ~~~~~~~i~~~i~~~l~-~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~~a~~~~~~----- 143 (235)
|+++...+..-+.+..+ ..+ .++..+++++|...+......+++..+. .+. ..+.+.|+..+|+++-..
T Consensus 116 p~ei~a~~L~~lk~~ae~~lg---~~v~~~VitVPa~f~~~qr~a~~~A~~~-AGl-~~~~li~EP~AAAlay~~~~~~~ 190 (554)
T 1yuw_A 116 PEEVSSMVLTKMKEIAEAYLG---KTVTNAVVTVPAYFNDSQRQATKDAGTI-AGL-NVLRIINEPTAAAIAYGLDKKVG 190 (554)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS---SCCCEEEEEECTTCCHHHHHHHHHHHHT-TTC-EEEEEEEHHHHHHHHTTCSTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEEEeCcHHHHHHHHHhhccCC
Confidence 56665555554444322 223 2456778999998776665566666544 453 568999999988775321
Q ss_pred CCCCEEEEEeCCCceeEEEec--CCcE
Q 026689 144 GKLHGCVLIAGTGTIAYGFTE--DGRD 168 (235)
Q Consensus 144 g~~~gi~li~GTGs~~~g~~~--~G~~ 168 (235)
.....+++=+|.|..-..+.. +|..
T Consensus 191 ~~~~vlV~D~GgGT~Dvsv~~~~~g~~ 217 (554)
T 1yuw_A 191 AERNVLIFDLGGGTFDVSILTIAAGIF 217 (554)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence 123467788888865444433 5543
No 116
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=43.51 E-value=17 Score=30.86 Aligned_cols=41 Identities=10% Similarity=-0.118 Sum_probs=25.7
Q ss_pred eEEEeCcHHHHHHhhc---CCCCCEEEEEeCCCceeEEEecCCc
Q 026689 127 RLYVHNDALAALASGT---MGKLHGCVLIAGTGTIAYGFTEDGR 167 (235)
Q Consensus 127 ~v~v~NDa~~a~~~~~---~g~~~gi~li~GTGs~~~g~~~~G~ 167 (235)
.|.+.+-..+|+++.. ......+++=+|-|..-..+..+|.
T Consensus 142 ~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~ 185 (320)
T 2zgy_A 142 DVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKL 185 (320)
T ss_dssp EEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGG
T ss_pred EEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCe
Confidence 5666676676665421 1223467888898876666666664
No 117
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=42.24 E-value=66 Score=27.38 Aligned_cols=29 Identities=21% Similarity=0.117 Sum_probs=23.7
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeC
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~ 61 (235)
-.|.+|+||-+|.+++++. +++....+.+
T Consensus 132 ~~lviDIGGGStEl~~~~~----------~~~~~~~Sl~ 160 (315)
T 3mdq_A 132 ISLAMDIGGGSVEFIIGNK----------NEILWKQSFE 160 (315)
T ss_dssp CEEEEEECSSCEEEEEECS----------SCEEEEEEES
T ss_pred CEEEEEeCCCceEEEEEEC----------CeEeeeEEEe
Confidence 4789999999999999974 6777766654
No 118
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=38.06 E-value=18 Score=31.07 Aligned_cols=23 Identities=30% Similarity=0.291 Sum_probs=16.9
Q ss_pred cccCCCcEEEEEEcCccceEEEE
Q 026689 16 EESGGREVILGLDGGTTSTVCIC 38 (235)
Q Consensus 16 ~~~~m~~~~LgiD~GgT~t~~~l 38 (235)
|+..+.++++|||+|-..||++.
T Consensus 1 ~~~~~~~~iigiD~G~~~~K~~~ 23 (329)
T 4apw_A 1 MENITNEYVMTLDAGKYETKLIG 23 (329)
T ss_dssp ----CCEEEEEEEECSSEEEEEE
T ss_pred CCCccCceEEEEecCCceEEEEe
Confidence 44555678999999999999975
No 119
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=35.13 E-value=2.2e+02 Score=25.06 Aligned_cols=76 Identities=17% Similarity=0.111 Sum_probs=47.8
Q ss_pred cEEEEEEcCcc--ceEEEEEeCccCCCCCCCCCCEEEEEEeCCCC-----------CccCCHH-------HHHHHHHHHH
Q 026689 22 EVILGLDGGTT--STVCICMPVISMSDSLPDPLPVLARAAAGCSN-----------HNSVGED-------AARETIEKVM 81 (235)
Q Consensus 22 ~~~LgiD~GgT--~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~-----------~~~~~~~-------~~~~~i~~~i 81 (235)
+++||+=.|++ .+.+++++..+. . +++.....+.+. .....++ ++-+...+++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~------~-~l~~~~~~py~~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av 74 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDR------T-TLLASHYLPMPAGLREDILALCVPGPDEIARAAEVEQRWVALAAQGV 74 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSS------E-EEEEEEEEECCHHHHHHHHHTTSCCBTHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEecCC------c-eecceeeecCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 38999999987 488999987211 2 555555554221 0011122 1234445677
Q ss_pred HHHHHHcCCCcccceeeEEeccCCC
Q 026689 82 ADALLKSGSNRSAVRAVCLAVSGVN 106 (235)
Q Consensus 82 ~~~l~~~~~~~~~i~~igigi~G~~ 106 (235)
.++++++++++++|..| |.-|..
T Consensus 75 ~~~l~~~~~~~~~Id~I--GsHGQT 97 (371)
T 3qbx_A 75 RELLLQQQMSPDEVRAI--GSHGQT 97 (371)
T ss_dssp HHHHHHTTCCGGGCCEE--EECCEE
T ss_pred HHHHHHcCCCcccccEE--EeCCcc
Confidence 78889999998899885 667773
No 120
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=32.02 E-value=1.2e+02 Score=25.88 Aligned_cols=20 Identities=15% Similarity=0.110 Sum_probs=18.1
Q ss_pred cEEEEEEcCccceEEEEEeC
Q 026689 22 EVILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~ 41 (235)
..++.+|+||..+.+.++..
T Consensus 206 ~~vlV~D~Gggt~dvsv~~~ 225 (394)
T 3qfu_A 206 HQIIVYDLGGGTFDVSLLSI 225 (394)
T ss_dssp EEEEEEEECSSCEEEEEEEE
T ss_pred ceEEEEEcCCCceeEEEEEE
Confidence 47899999999999999986
No 121
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=31.59 E-value=85 Score=27.18 Aligned_cols=49 Identities=29% Similarity=0.386 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCC
Q 026689 72 AARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPG 124 (235)
Q Consensus 72 ~~~~~i~~~i~~~l~~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~ 124 (235)
..++.+.+.+++++++++..+.+|..|.+ .|-.+. -.-+++.|++.|+.
T Consensus 322 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~L--vGG~s~--~p~v~~~l~~~f~~ 370 (409)
T 4gni_A 322 TVFEGFNRLVESAVKKAGLDPLDVDEVIM--SGGTSN--TPRIAANFRYIFPE 370 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEE--ESGGGG--CHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEE--ECCccc--cHHHHHHHHHHcCC
Confidence 35677888888899988888778888654 443222 23578888889973
No 122
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=31.41 E-value=1.3e+02 Score=25.91 Aligned_cols=21 Identities=14% Similarity=0.132 Sum_probs=18.6
Q ss_pred CcEEEEEEcCccceEEEEEeC
Q 026689 21 REVILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 21 ~~~~LgiD~GgT~t~~~l~d~ 41 (235)
...++.+|+||..+.+.++..
T Consensus 213 ~~~vlV~D~GgGT~dvsv~~~ 233 (404)
T 3i33_A 213 EKNVLIFDLGGGTFDVSILTI 233 (404)
T ss_dssp CCEEEEEEECSSCEEEEEEEE
T ss_pred CceEEEEECCCCcEEEEEEEE
Confidence 347899999999999999986
No 123
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=29.11 E-value=71 Score=28.41 Aligned_cols=29 Identities=21% Similarity=0.135 Sum_probs=23.2
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEE
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAA 59 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~ 59 (235)
.+|.|..|.+++|+.|+|.. +.+++++..
T Consensus 3 ~iLviN~GSSSlK~~l~~~~--------~~~~l~~G~ 31 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPH--------TSQSLVTGL 31 (384)
T ss_dssp EEEEEEECSSCEEEEEEETT--------TTEEEEEEE
T ss_pred EEEEEECCchhheEEEEecC--------CCceEEEEE
Confidence 78999999999999999962 455666553
No 124
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=28.85 E-value=2.3e+02 Score=24.97 Aligned_cols=76 Identities=11% Similarity=0.146 Sum_probs=48.5
Q ss_pred cEEEEEEcCccc--eEEEEEeCccCCCCCCCCCCEEEEEEeCCCC-----------CccCCHH-------HHHHHHHHHH
Q 026689 22 EVILGLDGGTTS--TVCICMPVISMSDSLPDPLPVLARAAAGCSN-----------HNSVGED-------AARETIEKVM 81 (235)
Q Consensus 22 ~~~LgiD~GgT~--t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~-----------~~~~~~~-------~~~~~i~~~i 81 (235)
.++||+=.|++- +.+++++..+. .-+++...+.+.+. ....+.+ ++-+...+++
T Consensus 5 ~~~iGlMSGTSlDGiD~alv~~~~~------~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av 78 (370)
T 3cqy_A 5 AYYIGLMSGTSMDGVDAVLVDFAGE------QPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAV 78 (370)
T ss_dssp CEEEEEEECTTCCCEEEEEEECSSS------SCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccchhhHeEEEEEEeCC------eEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 378999999874 88999997211 24466666655221 0011111 1233445677
Q ss_pred HHHHHHcCCCcccceeeEEeccCC
Q 026689 82 ADALLKSGSNRSAVRAVCLAVSGV 105 (235)
Q Consensus 82 ~~~l~~~~~~~~~i~~igigi~G~ 105 (235)
.++++++++++++|..| |.-|.
T Consensus 79 ~~~l~~~~~~~~~i~~I--GsHGQ 100 (370)
T 3cqy_A 79 NNLLAKTKIAKDEIIAI--GSHGQ 100 (370)
T ss_dssp HHHHHHHCCCGGGEEEE--EEEEE
T ss_pred HHHHHHcCCCcccccEE--EeCCc
Confidence 78888999998899886 66777
No 125
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=28.24 E-value=59 Score=29.45 Aligned_cols=20 Identities=20% Similarity=0.363 Sum_probs=18.5
Q ss_pred cEEEEEEcCccceEEEEEeC
Q 026689 22 EVILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~ 41 (235)
+.+|.|..|.+++|+.|++.
T Consensus 6 ~~ILviNaGSSSlKf~L~~~ 25 (438)
T 4h0p_A 6 EYLLAINCGSSSIKGKLFAI 25 (438)
T ss_dssp EEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEECCcccceeEEEEc
Confidence 47999999999999999986
No 126
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=28.17 E-value=50 Score=28.33 Aligned_cols=20 Identities=15% Similarity=0.185 Sum_probs=18.3
Q ss_pred cEEEEEEcCccceEEEEEeC
Q 026689 22 EVILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~ 41 (235)
..++.||+||..|.++++..
T Consensus 190 ~~vlVvDIGgGTtDv~vi~~ 209 (346)
T 2fsj_A 190 GYGVVIDVGSRTTDVLTINL 209 (346)
T ss_dssp SEEEEEEECSSCEEEEEEET
T ss_pred CcEEEEECCCCcEEEEEEEe
Confidence 46899999999999999996
No 127
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=27.02 E-value=3.6e+02 Score=24.53 Aligned_cols=20 Identities=25% Similarity=0.238 Sum_probs=17.2
Q ss_pred cEEEEEEcCccceEEEEEeC
Q 026689 22 EVILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~ 41 (235)
..++|||.|+|.+.+++++.
T Consensus 4 ~~~iGIDlGTt~s~va~~~~ 23 (554)
T 1yuw_A 4 GPAVGIDLGTTYSCVGVFQH 23 (554)
T ss_dssp CCCEEEEECSSEEEEEEECS
T ss_pred CCEEEEEeCcccEEEEEEEC
Confidence 36899999999999998863
No 128
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=26.58 E-value=69 Score=28.67 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=17.8
Q ss_pred EEEEEEcCccceEEEEEeC
Q 026689 23 VILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~ 41 (235)
.+|.|..|.|++|+.|++.
T Consensus 2 ~ILviN~GSSS~K~~l~~~ 20 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIEM 20 (403)
T ss_dssp EEEEEEEETTEEEEEEEET
T ss_pred eEEEEeCCchhheeEEEEc
Confidence 5899999999999999995
No 129
>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, STR genomics, MCSG, PSI-2; 1.60A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=25.55 E-value=2.3e+02 Score=21.69 Aligned_cols=49 Identities=16% Similarity=0.118 Sum_probs=34.3
Q ss_pred CccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHHHHHHHHHHcCC
Q 026689 30 GTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGS 90 (235)
Q Consensus 30 GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~ 90 (235)
=|+..-.+++|. .|++|.-...|++-.+..+.++ ++..-+.++++..|+
T Consensus 106 PGSGSmLvimD~---------kGRiLtas~SPs~~iHk~~ie~---~v~~E~~~AL~RiG~ 154 (156)
T 3brc_A 106 PGSGSLLVIMDS---------RGRLLSAAMSPPHVIHSMEVRE---AVRSEMTHALERIGF 154 (156)
T ss_dssp TTSCEEEEEEET---------TSCEEEEEEECCTTTSCCCHHH---HHHHHHHHHHHTTTC
T ss_pred CCCccEEEEEcC---------CCcEEeeccCchhhhhcccHHH---HHHHHHHHHHHHhCc
Confidence 367777888998 9999998887776555555554 455555666665554
No 130
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=23.54 E-value=88 Score=28.04 Aligned_cols=19 Identities=16% Similarity=0.281 Sum_probs=17.6
Q ss_pred EEEEEEcCccceEEEEEeC
Q 026689 23 VILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~ 41 (235)
.+|.|..|.|++|+.|++.
T Consensus 2 ~ILviN~GSSS~K~~lf~~ 20 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDM 20 (408)
T ss_dssp EEEEEEECSSCEEEEEEET
T ss_pred eEEEEECCchhheeEEEEc
Confidence 4899999999999999995
No 131
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=22.52 E-value=71 Score=27.31 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccceeeEEeccCCCCccHHHHHHHHHHhhCCCCceEEEeCcHH
Q 026689 73 ARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDAL 135 (235)
Q Consensus 73 ~~~~i~~~i~~~l~~~~~~~~~i~~igigi~G~~~~~~~~~l~~~l~~~~~~~~~v~v~NDa~ 135 (235)
.++.+.+.+++++++++..+.++..|.+ .|-.+. -.-+++.|++.|+ .++....|..
T Consensus 312 ~~~~i~~~i~~~l~~~~~~~~~i~~IvL--~GG~s~--~p~l~~~l~~~~~--~~v~~~~~p~ 368 (383)
T 1dkg_D 312 LVNRSIELLKVALQDAGLSVSDIDDVIL--VGGQTR--MPMVQKKVAEFFG--KEPRKDVNPD 368 (383)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEE--ESGGGG--SHHHHHHHHHHHS--SCCBCSSCTT
T ss_pred HHHHHHHHHHHHHHHcCCCHhhCCEEEE--ecCccc--cHHHHHHHHHHhC--CCCCCCcChH
Confidence 4667778888888888877667777654 443322 2346778888887 4555555544
No 132
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=21.75 E-value=1.6e+02 Score=23.60 Aligned_cols=18 Identities=17% Similarity=0.012 Sum_probs=16.2
Q ss_pred EEEEEcCccceEEEEEeC
Q 026689 24 ILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 24 ~LgiD~GgT~t~~~l~d~ 41 (235)
.+.+|+||..|.++++..
T Consensus 141 ~~viDiGggst~~~~~~~ 158 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIEK 158 (272)
T ss_dssp EEEEEECSSCEEEEEEET
T ss_pred EEEEEECCCcEEEEEEEC
Confidence 589999999999999874
No 133
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=21.17 E-value=2.6e+02 Score=23.19 Aligned_cols=20 Identities=15% Similarity=0.102 Sum_probs=18.0
Q ss_pred cEEEEEEcCccceEEEEEeC
Q 026689 22 EVILGLDGGTTSTVCICMPV 41 (235)
Q Consensus 22 ~~~LgiD~GgT~t~~~l~d~ 41 (235)
..++.+|+|+..|.+.++..
T Consensus 147 ~~~lVvDiGggttdvsv~~~ 166 (344)
T 1jce_A 147 SGNMVVDIGGGTTEVAVISL 166 (344)
T ss_dssp SCEEEEEECSSCEEEEEEET
T ss_pred ceEEEEEeCCCeEEEEEEEc
Confidence 36899999999999999986
No 134
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=21.00 E-value=1.2e+02 Score=25.69 Aligned_cols=34 Identities=29% Similarity=0.273 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCCCcccceeeEEeccCCC
Q 026689 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVSGVN 106 (235)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~igigi~G~~ 106 (235)
.++++.++.+...+++.+.+.+. .++.+|+||=.
T Consensus 24 ~~~~~~i~~~v~~L~d~l~~~g~-----~~vvvglSGGi 57 (285)
T 3dpi_A 24 FDARDEAERRIGFVADYLRTAGL-----RACVLGISGGI 57 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTC-----CEEEEECCSSH
T ss_pred CCHHHHHHHHHHHHHHHHHHcCC-----CcEEEEccCCh
Confidence 68899999999999999988764 34556666653
No 135
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=20.78 E-value=2.3e+02 Score=24.95 Aligned_cols=41 Identities=12% Similarity=-0.010 Sum_probs=28.7
Q ss_pred EEEEEEcCccceEEEEEeCccCCCCCCCCCCEEEEEEeCCCCCccCCHHHHHHHHHH
Q 026689 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEK 79 (235)
Q Consensus 23 ~~LgiD~GgT~t~~~l~d~~~~~~~~~~~g~il~~~~~~~~~~~~~~~~~~~~~i~~ 79 (235)
-++.||+|+..|.++++.. |.++.....+ .+-+.+-+.|..
T Consensus 207 gv~vvDiGggttdisi~~~----------g~~~~~~~i~------~GG~~it~dIa~ 247 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKN----------GVPIKISYVP------VGMKHVIKDVSA 247 (419)
T ss_dssp CEEEEEECSSSEEEEEEET----------TEEEEEEEES------CCHHHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEEC----------CEEEEEEecc------cHHHHHHHHHHH
Confidence 4789999999999999874 6666654432 355555555544
Done!