BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026691
(235 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225432660|ref|XP_002282406.1| PREDICTED: uncharacterized protein LOC100259756 isoform 1 [Vitis
vinifera]
gi|297737050|emb|CBI26251.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/182 (77%), Positives = 157/182 (86%)
Query: 54 KLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEG 113
KL SR H+VLP E+ SSRRHV+ S +LVAILTFN G PLPV AED SNGQ++ E+G
Sbjct: 28 KLKSRCHIVLPSQESPSSRRHVLVGSGASLVAILTFNGGFLPLPVWAEDESNGQEDDEKG 87
Query: 114 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKES 173
VVGAIKSLFDPNEK KSGKVLPKAYL SARE+VKTLRESLKEDPKDIA FRR AD+AKES
Sbjct: 88 VVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRESLKEDPKDIAKFRRTADAAKES 147
Query: 174 IRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
IR+YLS+WRG++TV EESY LEKAIRSLASFYSKAGPSA LP EVKSEIL+DL+TAE+
Sbjct: 148 IREYLSSWRGKQTVVSEESYAMLEKAIRSLASFYSKAGPSAALPEEVKSEILDDLNTAEE 207
Query: 234 FL 235
FL
Sbjct: 208 FL 209
>gi|147790522|emb|CAN69770.1| hypothetical protein VITISV_022066 [Vitis vinifera]
Length = 230
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 157/203 (77%), Gaps = 21/203 (10%)
Query: 54 KLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEG 113
KL SR H+VLP E+ SSRRHV+ S +LVAILTFN G PLPV AED SNGQ++ E+G
Sbjct: 28 KLKSRCHIVLPSQESPSSRRHVLVGSGASLVAILTFNGGFLPLPVWAEDESNGQEDDEKG 87
Query: 114 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKES 173
VVGAIKSLFDPNEK KSGKVLPKAYL SARE+VKTLRESLKEDPKDIA FRR AD+AKES
Sbjct: 88 VVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRESLKEDPKDIAKFRRTADAAKES 147
Query: 174 IRDYLSNWRGQKTVAGE---------------------ESYVELEKAIRSLASFYSKAGP 212
IR+YLS+WRG++TV E ESY LEKAIRSLASFYSKAGP
Sbjct: 148 IREYLSSWRGKQTVVSEVCILQKHFWFLRWIPVVTVXHESYAMLEKAIRSLASFYSKAGP 207
Query: 213 SAPLPGEVKSEILNDLDTAEKFL 235
SA LP EVKSEIL+DL+TAE+FL
Sbjct: 208 SAALPEEVKSEILDDLNTAEEFL 230
>gi|359477522|ref|XP_003631991.1| PREDICTED: uncharacterized protein LOC100259756 isoform 2 [Vitis
vinifera]
Length = 235
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 141/208 (67%), Positives = 157/208 (75%), Gaps = 26/208 (12%)
Query: 54 KLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEG 113
KL SR H+VLP E+ SSRRHV+ S +LVAILTFN G PLPV AED SNGQ++ E+G
Sbjct: 28 KLKSRCHIVLPSQESPSSRRHVLVGSGASLVAILTFNGGFLPLPVWAEDESNGQEDDEKG 87
Query: 114 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKES 173
VVGAIKSLFDPNEK KSGKVLPKAYL SARE+VKTLRESLKEDPKDIA FRR AD+AKES
Sbjct: 88 VVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRESLKEDPKDIAKFRRTADAAKES 147
Query: 174 IRDYLSNWRGQKTV--------------------------AGEESYVELEKAIRSLASFY 207
IR+YLS+WRG++TV EESY LEKAIRSLASFY
Sbjct: 148 IREYLSSWRGKQTVVSEYKGSLQLSSTAYHTRTEHFAERLGNEESYAMLEKAIRSLASFY 207
Query: 208 SKAGPSAPLPGEVKSEILNDLDTAEKFL 235
SKAGPSA LP EVKSEIL+DL+TAE+FL
Sbjct: 208 SKAGPSAALPEEVKSEILDDLNTAEEFL 235
>gi|255552187|ref|XP_002517138.1| conserved hypothetical protein [Ricinus communis]
gi|223543773|gb|EEF45301.1| conserved hypothetical protein [Ricinus communis]
Length = 204
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 160/216 (74%), Gaps = 13/216 (6%)
Query: 21 IAFFVSASLCTSFLMLSFI-NLFCFFTASLWKADKLHSRTHVVLPPVEAASSRRHVISCS 79
+A ++ LC S + I N C W+ D + S V L SRRH++ CS
Sbjct: 1 MAVILALKLCPSVTCKTSIPNNNCKLQ---WRCDTVPSSPAVTL-------SRRHILLCS 50
Query: 80 STALVAILTFNCGLAPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYL 139
++ L IL NC PLPV+AED SN Q+EK +GV+G IKSLFDPNEKTKSGK+LPKAYL
Sbjct: 51 ASFLT-ILNLNCISTPLPVRAEDESNAQEEK-DGVIGTIKSLFDPNEKTKSGKLLPKAYL 108
Query: 140 KSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKA 199
KSAR++VKTLR+SLKEDPKD+ FRR AD+AKESIR+YL +WRGQ+ V EESY+ELEKA
Sbjct: 109 KSARDVVKTLRDSLKEDPKDVTQFRRTADAAKESIREYLGSWRGQEKVVREESYIELEKA 168
Query: 200 IRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
IRSLASFYSKAGPSAPLP EVKSEILNDL AE+FL
Sbjct: 169 IRSLASFYSKAGPSAPLPEEVKSEILNDLSAAEEFL 204
>gi|224102063|ref|XP_002312530.1| predicted protein [Populus trichocarpa]
gi|118485936|gb|ABK94813.1| unknown [Populus trichocarpa]
gi|222852350|gb|EEE89897.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/182 (68%), Positives = 148/182 (81%), Gaps = 6/182 (3%)
Query: 54 KLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEG 113
KL+SR + VL A SRRHV+ S++ V +LT NC L PL +A+ ++EK++G
Sbjct: 29 KLNSRCNAVLSSQAALPSRRHVLVFSAS-FVTVLTLNCFLTPLQARAK-----EEEKDDG 82
Query: 114 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKES 173
V GAIKSLFDPNEKTKSGK+LPKAYLK+ARE+VK LRESLKED KDIA FRR AD+AKES
Sbjct: 83 VAGAIKSLFDPNEKTKSGKLLPKAYLKAAREVVKNLRESLKEDTKDIAKFRRTADAAKES 142
Query: 174 IRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
IR+YL +WRGQ+ V EESYVELEKAIRSLASFYS+AGPSA LP EV+SEILNDL+TAE+
Sbjct: 143 IREYLGSWRGQEKVVREESYVELEKAIRSLASFYSRAGPSAQLPEEVRSEILNDLNTAEE 202
Query: 234 FL 235
FL
Sbjct: 203 FL 204
>gi|388498828|gb|AFK37480.1| unknown [Lotus japonicus]
Length = 208
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/184 (67%), Positives = 148/184 (80%), Gaps = 4/184 (2%)
Query: 53 DKLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCG-LAPLPVQAEDMSNGQDEKE 111
DKL R+++ LPP+EA+SSRRH++ T+LV T CG L+PL AE+ S +++ +
Sbjct: 28 DKLQFRSNIALPPLEASSSRRHLLLSVGTSLV---TMTCGGLSPLMASAEENSADKEDDD 84
Query: 112 EGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAK 171
+GVVGAIKSLFDPNEK+KSGKVLPKAYLKSARE+VKTLRESL E P D A FRR AD+AK
Sbjct: 85 KGVVGAIKSLFDPNEKSKSGKVLPKAYLKSAREVVKTLRESLNEVPDDNAKFRRTADAAK 144
Query: 172 ESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 231
ESIRDYL WRG + VA EESY LEKAIRSLA FYS+AGPSAPLP EVK+EIL+ L+TA
Sbjct: 145 ESIRDYLGGWRGNQDVAQEESYDMLEKAIRSLAKFYSRAGPSAPLPEEVKTEILDYLNTA 204
Query: 232 EKFL 235
E+FL
Sbjct: 205 EEFL 208
>gi|356526109|ref|XP_003531662.1| PREDICTED: uncharacterized protein LOC100805317 [Glycine max]
Length = 207
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 148/183 (80%), Gaps = 3/183 (1%)
Query: 53 DKLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEE 112
DK+ SR+++ LPP EA+SSRRH++ +L LT CGL+P V AE+ S ++E+++
Sbjct: 28 DKMQSRSNIALPPSEASSSRRHLLIGVGPSL---LTLTCGLSPPTVWAEEKSGDKEEEDK 84
Query: 113 GVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKE 172
GV+GAIKSLFDPNEKTKSGKVLPKAYL+SARE+VKTLRESL E D A FRR ADSAKE
Sbjct: 85 GVIGAIKSLFDPNEKTKSGKVLPKAYLRSAREVVKTLRESLNEGTDDNAKFRRTADSAKE 144
Query: 173 SIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
SIR+YL +WRG + VA EESYV LEK IRSLA++YSKAGPSAPL EVKSEIL+ L+TAE
Sbjct: 145 SIREYLGSWRGNQIVAQEESYVILEKVIRSLANYYSKAGPSAPLSHEVKSEILDYLNTAE 204
Query: 233 KFL 235
+FL
Sbjct: 205 EFL 207
>gi|449444118|ref|XP_004139822.1| PREDICTED: uncharacterized protein LOC101211891 [Cucumis sativus]
gi|449492573|ref|XP_004159036.1| PREDICTED: uncharacterized LOC101211891 [Cucumis sativus]
Length = 206
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 157/215 (73%), Gaps = 9/215 (4%)
Query: 21 IAFFVSASLCTSFLMLSFINLFCFFTASLWKADKLHSRTHVVLPPVEAASSRRHVISCSS 80
+A F+ A +C + + +L + KL SR+ VVLP E RRH++ +
Sbjct: 1 MAAFIHAKICPTTISTLDRSLISEY------GRKLPSRSRVVLPYQEVC--RRHLV-WNG 51
Query: 81 TALVAILTFNCGLAPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLK 140
+LV LTFN GL P QAE+M N +E++ GV+G IKS+FDPNEKTKSGK+LPKAYLK
Sbjct: 52 MSLVVFLTFNNGLTPSSAQAEEMPNNMEEEDNGVIGTIKSIFDPNEKTKSGKILPKAYLK 111
Query: 141 SARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAI 200
SARE+VKTLRESL+EDPKD A FRR AD+AKESIRDYLSNW G++TV EESYV LEKAI
Sbjct: 112 SAREVVKTLRESLQEDPKDGAKFRRTADAAKESIRDYLSNWLGKQTVVQEESYVVLEKAI 171
Query: 201 RSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
RSLA FY+KAGPSAPLP VKS+IL+DLD E+ L
Sbjct: 172 RSLAGFYAKAGPSAPLPEAVKSDILDDLDKVEESL 206
>gi|18390518|ref|NP_563737.1| LOW PSII accumulation 19 protein [Arabidopsis thaliana]
gi|8778732|gb|AAF79740.1|AC005106_21 T25N20.4 [Arabidopsis thaliana]
gi|13877959|gb|AAK44057.1|AF370242_1 unknown protein [Arabidopsis thaliana]
gi|23296694|gb|AAN13149.1| unknown protein [Arabidopsis thaliana]
gi|332189712|gb|AEE27833.1| LOW PSII accumulation 19 protein [Arabidopsis thaliana]
Length = 199
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 133/166 (80%), Gaps = 9/166 (5%)
Query: 72 RRHVISC--SSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTK 129
RR + C +++ +A + F+ +QA+ DE E GVVGA K+LFDPNE+TK
Sbjct: 41 RRGFLKCVVGASSFMATIEFSG------LQAQASEEKLDEGE-GVVGAFKTLFDPNERTK 93
Query: 130 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
SGK LPKAYLKSARE+VKT+RESLKE+PKD A FRR+AD+AKESIRDYLSNWRGQKTVAG
Sbjct: 94 SGKELPKAYLKSAREVVKTMRESLKENPKDNAKFRRSADAAKESIRDYLSNWRGQKTVAG 153
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
EESYVELE IR+LA FYSKAGPSAPLP EVK+EIL+DL+ AE+FL
Sbjct: 154 EESYVELENVIRALAKFYSKAGPSAPLPDEVKTEILDDLNKAEEFL 199
>gi|26451618|dbj|BAC42906.1| unknown protein [Arabidopsis thaliana]
Length = 199
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/166 (66%), Positives = 133/166 (80%), Gaps = 9/166 (5%)
Query: 72 RRHVISC--SSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTK 129
RR + C +++ +A + F+ +QA+ DE E GVVGA K+LFDPNE+TK
Sbjct: 41 RRGFLKCVVGASSFMATIEFSG------LQAQASEEKLDEGE-GVVGAFKTLFDPNERTK 93
Query: 130 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
SGK LPKAYLKSARE+VKT+RESLKE+P+D A FRR+AD+AKESIRDYLSNWRGQKTVAG
Sbjct: 94 SGKELPKAYLKSAREVVKTMRESLKENPRDNAKFRRSADAAKESIRDYLSNWRGQKTVAG 153
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
EESYVELE IR+LA FYSKAGPSAPLP EVK+EIL+DL+ AE+FL
Sbjct: 154 EESYVELENVIRALAKFYSKAGPSAPLPDEVKTEILDDLNKAEEFL 199
>gi|297848810|ref|XP_002892286.1| hypothetical protein ARALYDRAFT_470540 [Arabidopsis lyrata subsp.
lyrata]
gi|297338128|gb|EFH68545.1| hypothetical protein ARALYDRAFT_470540 [Arabidopsis lyrata subsp.
lyrata]
Length = 199
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 117/127 (92%)
Query: 109 EKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNAD 168
E+ EGVVGA K+LFDPNE+TKSGK LPKAYLKSARE+VKT+RESLKE+PKD A FRR+AD
Sbjct: 73 EEGEGVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENPKDNAKFRRSAD 132
Query: 169 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 228
+AKESIRDYLSNWRGQKTVAGEESYVELE IR+LA FYSKAGPSAPLP EVK++IL+DL
Sbjct: 133 AAKESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLPDEVKTQILDDL 192
Query: 229 DTAEKFL 235
+ AE+FL
Sbjct: 193 NKAEEFL 199
>gi|413933081|gb|AFW67632.1| hypothetical protein ZEAMMB73_336647 [Zea mays]
Length = 208
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 118/144 (81%), Gaps = 7/144 (4%)
Query: 95 PLPVQA--EDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 152
P PV+A +D S+G EGV+GAIKS+FDPNE TK+GKVLPKAYLK+ARE+V+TLRES
Sbjct: 69 PAPVRAAEDDGSSGG----EGVLGAIKSIFDPNETTKAGKVLPKAYLKAAREVVRTLRES 124
Query: 153 LKEDPK-DIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAG 211
L+ED D+A FRRNAD+AKESIR +L WRGQ+ VA EESYV LEKAIRSLA FYSKAG
Sbjct: 125 LEEDDGGDMARFRRNADAAKESIRAFLGGWRGQQAVADEESYVALEKAIRSLAEFYSKAG 184
Query: 212 PSAPLPGEVKSEILNDLDTAEKFL 235
PSA LP +VK++IL+DL A+ +L
Sbjct: 185 PSASLPQDVKNKILDDLSAADAYL 208
>gi|326513898|dbj|BAJ92099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 107 QDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED--PKDIANFR 164
+D K EGVVGA KSLFDPNE+TK+GKVLPKAYLK+ARE+V+TLRESL+E D A FR
Sbjct: 100 EDGKGEGVVGAFKSLFDPNEETKAGKVLPKAYLKAAREVVRTLRESLEEGDAAGDSARFR 159
Query: 165 RNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
R ADSAK SIR++L WRGQ VA EESYV LEKAI+SLA FYSKAGP A LPG+VKS+I
Sbjct: 160 RGADSAKTSIREFLGGWRGQPAVAKEESYVALEKAIKSLAEFYSKAGPFASLPGDVKSKI 219
Query: 225 LNDLDTAEKFL 235
L+DL+ AE +L
Sbjct: 220 LDDLNAAEAYL 230
>gi|242032969|ref|XP_002463879.1| hypothetical protein SORBIDRAFT_01g008190 [Sorghum bicolor]
gi|241917733|gb|EER90877.1| hypothetical protein SORBIDRAFT_01g008190 [Sorghum bicolor]
Length = 205
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 114 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPK-DIANFRRNADSAKE 172
V+GAIKS+FDPNEKTK+GK LPKAYLK+ARE+V+TLRESL+ED D+A FRRNAD+AKE
Sbjct: 83 VLGAIKSIFDPNEKTKAGKTLPKAYLKAAREVVRTLRESLEEDDGGDMARFRRNADAAKE 142
Query: 173 SIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
SIR++L WRGQ+TVA EESYV LEKAIRSLA FYSKAGP APLP +VK++IL+DL A+
Sbjct: 143 SIREFLGGWRGQQTVAAEESYVALEKAIRSLAEFYSKAGPFAPLPQDVKNKILDDLSAAD 202
Query: 233 KFL 235
L
Sbjct: 203 ACL 205
>gi|326499962|dbj|BAJ90816.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 205
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 108/131 (82%), Gaps = 2/131 (1%)
Query: 107 QDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED--PKDIANFR 164
+D K EGVVGA KSLFDPNE+TK+GKVLPKAYLK+ARE+V+TLRESL+E D A FR
Sbjct: 75 EDGKGEGVVGAFKSLFDPNEETKAGKVLPKAYLKAAREVVRTLRESLEEGDAAGDSARFR 134
Query: 165 RNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
R ADSAK SIR++L WRGQ VA EESYV LEKAI+SLA FYSKAGP A LPG+VKS+I
Sbjct: 135 RGADSAKTSIREFLGGWRGQPAVAKEESYVALEKAIKSLAEFYSKAGPFASLPGDVKSKI 194
Query: 225 LNDLDTAEKFL 235
L+DL+ AE +L
Sbjct: 195 LDDLNAAEAYL 205
>gi|222625794|gb|EEE59926.1| hypothetical protein OsJ_12563 [Oryza sativa Japonica Group]
Length = 200
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 117 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 175
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 81 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 140
Query: 176 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 141 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 200
>gi|125545715|gb|EAY91854.1| hypothetical protein OsI_13500 [Oryza sativa Indica Group]
Length = 213
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 117 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 175
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 94 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 153
Query: 176 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 154 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 213
>gi|14626275|gb|AAK71543.1|AC087852_3 unknown protein [Oryza sativa Japonica Group]
Length = 213
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 117 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 175
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 94 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 153
Query: 176 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 154 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 213
>gi|115455321|ref|NP_001051261.1| Os03g0747700 [Oryza sativa Japonica Group]
gi|108711066|gb|ABF98861.1| expressed protein [Oryza sativa Japonica Group]
gi|113549732|dbj|BAF13175.1| Os03g0747700 [Oryza sativa Japonica Group]
gi|215765104|dbj|BAG86801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/120 (72%), Positives = 102/120 (85%), Gaps = 1/120 (0%)
Query: 117 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKED-PKDIANFRRNADSAKESIR 175
AIKS+FDPNE+TKSGKVLPKAYLK+ARE+V+TLRESL ED D+A FRR AD+AKESIR
Sbjct: 93 AIKSIFDPNERTKSGKVLPKAYLKAAREVVRTLRESLGEDDGGDVAKFRRGADAAKESIR 152
Query: 176 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++L WRGQ+ VA EESYV LEKAIRSLA FYSKAGP A LP +VK +IL +L+TA+ FL
Sbjct: 153 EFLGGWRGQQAVAAEESYVALEKAIRSLAEFYSKAGPFASLPKDVKDKILANLNTADAFL 212
>gi|357115294|ref|XP_003559425.1| PREDICTED: uncharacterized protein LOC100826702 [Brachypodium
distachyon]
Length = 204
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/121 (68%), Positives = 102/121 (84%), Gaps = 2/121 (1%)
Query: 117 AIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLK-EDPK-DIANFRRNADSAKESI 174
AI SLFDPNE+TK GKVLPKAYLK+ARE+V+TLRESL+ ED D+A FRR ADSAK SI
Sbjct: 84 AITSLFDPNEETKGGKVLPKAYLKAAREVVRTLRESLEGEDAGGDVAKFRRGADSAKASI 143
Query: 175 RDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKF 234
R+++ WRGQ+ VA EESYV LE AI+SLA FYSKAGP A LPG+V+++IL+DL+TA+ +
Sbjct: 144 REFIGGWRGQQAVAKEESYVALESAIKSLAEFYSKAGPFASLPGDVRNKILDDLNTADAY 203
Query: 235 L 235
L
Sbjct: 204 L 204
>gi|356523010|ref|XP_003530135.1| PREDICTED: uncharacterized protein LOC100797323 [Glycine max]
Length = 167
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 109/138 (78%), Gaps = 3/138 (2%)
Query: 53 DKLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEE 112
DKL SR+++ LP +EA+SSRRH++ +LV T CGL+P V AE+ S ++E+++
Sbjct: 28 DKLQSRSNIALPRLEASSSRRHLLISVGPSLV---TLTCGLSPSMVWAEEKSGEKEEEDK 84
Query: 113 GVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKE 172
GV+GAIKSLFDPNEKTKSGKVLPKAYLKSARE+VKT+RESL E D A FRR ADSAKE
Sbjct: 85 GVIGAIKSLFDPNEKTKSGKVLPKAYLKSAREVVKTMRESLNEVTDDNAKFRRTADSAKE 144
Query: 173 SIRDYLSNWRGQKTVAGE 190
SIR+YL +WRG +TVA E
Sbjct: 145 SIREYLGSWRGNQTVAQE 162
>gi|116783894|gb|ABK23129.1| unknown [Picea sitchensis]
Length = 210
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 109/144 (75%), Gaps = 1/144 (0%)
Query: 93 LAPLPVQ-AEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRE 151
+ PL Q A E +EG++G + SLFDPNEKTKSG++LPK YLK+ARE+VK LRE
Sbjct: 67 MVPLSFQRAHAEEKASSENDEGLLGGLLSLFDPNEKTKSGRILPKIYLKNAREVVKNLRE 126
Query: 152 SLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAG 211
SLKED KD A FRR+ADSAKESI+D++ NW GQ++V E+SY L K IR LA FYSK G
Sbjct: 127 SLKEDSKDTAKFRRSADSAKESIKDFMRNWTGQQSVTSEDSYAALVKVIRVLADFYSKKG 186
Query: 212 PSAPLPGEVKSEILNDLDTAEKFL 235
P+A LP ++KS++++DL++AE L
Sbjct: 187 PTAALPEDIKSKVMDDLNSAEAAL 210
>gi|168048832|ref|XP_001776869.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671725|gb|EDQ58272.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 100/156 (64%), Gaps = 7/156 (4%)
Query: 78 CSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKA 137
C+S+ ++ + G P AE+ N + E+ VV A+ LFDP++ TKSGK LPK
Sbjct: 4 CASSIMLGQMLNYTG----PALAEE--NAKKEEGGNVVDAVLELFDPDQLTKSGKKLPKK 57
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y+KS RE+VK LRES +D D A FRRNADSAKE+IR+YL NWRG K V E SY L
Sbjct: 58 YVKSVREVVKNLRESFTQDSNDGAKFRRNADSAKEAIREYLQNWRGSKVVETEASYFFLN 117
Query: 198 -KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
+A L FYS GP APLP ++K+ +L DL+ A+
Sbjct: 118 ARAFLELGKFYSSKGPQAPLPEDIKNRVLEDLNKAD 153
>gi|302792975|ref|XP_002978253.1| hypothetical protein SELMODRAFT_37127 [Selaginella moellendorffii]
gi|300154274|gb|EFJ20910.1| hypothetical protein SELMODRAFT_37127 [Selaginella moellendorffii]
Length = 137
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Query: 110 KEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDP-KDIANFRRNAD 168
KEE ++ I S+FDPNE TKSGK LPK+YLK+AR++VK LRE+L++DP K+ FR A+
Sbjct: 11 KEESLLDGILSVFDPNETTKSGKKLPKSYLKAARDVVKNLREALQKDPAKEEQKFREAAN 70
Query: 169 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 228
+AK+SIR+YL+ W+ K V + SY LEKA+R L SFY K+GP+A +P ++KSEIL +L
Sbjct: 71 TAKDSIREYLTKWKNSKEVQEQSSYQVLEKALRQLGSFYLKSGPTAVMPDDIKSEILQNL 130
Query: 229 DTAE 232
AE
Sbjct: 131 SNAE 134
>gi|302765789|ref|XP_002966315.1| hypothetical protein SELMODRAFT_37126 [Selaginella moellendorffii]
gi|300165735|gb|EFJ32342.1| hypothetical protein SELMODRAFT_37126 [Selaginella moellendorffii]
Length = 137
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 94/127 (74%), Gaps = 1/127 (0%)
Query: 110 KEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDP-KDIANFRRNAD 168
KEE ++ I S+FDPNE TKSGK LPK+YLK+AR++VK LRE+L++DP K+ FR A+
Sbjct: 11 KEESLLDGILSVFDPNETTKSGKKLPKSYLKAARDVVKNLREALQKDPAKEEQKFREAAN 70
Query: 169 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 228
+AK+SIR+YL+ W+ K V + SY L KA+R L SFY K+GP+A +P ++KSEIL +L
Sbjct: 71 TAKDSIREYLTKWKNSKEVQEQSSYQVLGKALRQLGSFYLKSGPTAVMPDDIKSEILQNL 130
Query: 229 DTAEKFL 235
AE L
Sbjct: 131 SNAETDL 137
>gi|195636404|gb|ACG37670.1| hypothetical protein [Zea mays]
Length = 76
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/76 (68%), Positives = 62/76 (81%)
Query: 160 IANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGE 219
+A FRRNAD+AKESIR +L WRGQ+ V EESYV LEKAIRSLA FYSKAGPSA LP +
Sbjct: 1 MARFRRNADAAKESIRAFLGGWRGQQAVTDEESYVALEKAIRSLAEFYSKAGPSASLPQD 60
Query: 220 VKSEILNDLDTAEKFL 235
VK++IL+DL A+ +L
Sbjct: 61 VKNKILDDLSAADAYL 76
>gi|326489223|dbj|BAK01595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 188
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 107 QDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKE 155
+D K EGVVGA KSLFDPNE+TK+GKVLPKAYLK+ARE+V+TLRESL+E
Sbjct: 71 EDGKGEGVVGAFKSLFDPNEETKAGKVLPKAYLKAAREVVRTLRESLEE 119
>gi|307110465|gb|EFN58701.1| hypothetical protein CHLNCDRAFT_140330 [Chlorella variabilis]
Length = 131
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 137 AYLKSARELVKTLRESLKEDPKDIA--NFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 194
AY +A+ LV LRE++ D D RR AD AK +R +L+ W+G V GEESY
Sbjct: 18 AYEDTAQRLVDALREAISTDLSDAEERQVRRAADPAKSLVRQFLTRWKGNGLVEGEESYR 77
Query: 195 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+L AI+ L +FY + G L GEV +L+ LD AE L
Sbjct: 78 QLSAAIQLLGTFYQQNGQRTRLTGEVGQAVLDRLDAAEAAL 118
>gi|384252190|gb|EIE25666.1| hypothetical protein COCSUDRAFT_52532 [Coccomyxa subellipsoidea
C-169]
Length = 214
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 128 TKSGKVLPKAYLKSARELVKTLRESLKEDPKDIA--NFRRNADSAKESIRDYLSNWRGQK 185
++ + LP+ Y + A +L LRE+++ D D R+ AD AK ++ +LS W+ +
Sbjct: 93 SEPARTLPQGYEEFAGKLAAALREAIETDLSDAEERQVRKKADPAKNLVKGWLSEWKDAQ 152
Query: 186 TVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
V GE SY +L I+ L FY K G A LP + +E+L L AE L
Sbjct: 153 GVQGEASYTQLSGTIKELGEFYRKKGQRARLPRSLGNELLAKLAAAENAL 202
>gi|255083615|ref|XP_002508382.1| predicted protein [Micromonas sp. RCC299]
gi|226523659|gb|ACO69640.1| predicted protein [Micromonas sp. RCC299]
Length = 180
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 131 GKVLPKAYLKSARELVKTLRESLK---EDPKDIANFRRNADSAKESIRDYLSNWRGQKTV 187
G LP Y K AR+ VKTL SL+ +P D FR+ A+ AKE+++ ++ +W
Sbjct: 60 GLDLPDDYFKKARDAVKTLVASLEFEATNPSDADRFRK-AEPAKEAVKAFIKDWASAPAA 118
Query: 188 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
GE ++ ++ A+R L FY + G + L E + IL L A + L
Sbjct: 119 QGERAHDDIVLAVRELGEFYKENGSRSRLSPEARESILAKLYDAREAL 166
>gi|16331054|ref|NP_441782.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|383322796|ref|YP_005383649.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325965|ref|YP_005386818.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491849|ref|YP_005409525.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384437117|ref|YP_005651841.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|451815211|ref|YP_007451663.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|1653549|dbj|BAA18462.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|339274149|dbj|BAK50636.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
gi|359272115|dbj|BAL29634.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359275285|dbj|BAL32803.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359278455|dbj|BAL35972.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407961579|dbj|BAM54819.1| photosystem II 11 kD protein [Bacillus subtilis BEST7613]
gi|451781180|gb|AGF52149.1| photosystem II 11 kD protein [Synechocystis sp. PCC 6803]
Length = 135
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 130 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 28 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 86
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+
Sbjct: 87 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAER 129
>gi|6919945|sp|P74367.2|PS11_SYNY3 RecName: Full=Photosystem II 11 kDa protein; Flags: Precursor
gi|1183848|dbj|BAA11640.1| 11 kDa protein of photosystem II [Synechocystis sp. PCC 6803]
Length = 134
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 130 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 27 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 85
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+
Sbjct: 86 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAER 128
>gi|449438078|ref|XP_004136817.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Cucumis sativus]
gi|449493075|ref|XP_004159186.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Cucumis sativus]
Length = 169
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y+K E++ +R ++ D D N +ES +++ +R +K + G S+ ++
Sbjct: 69 YVKDTNEVIGKVRTTITMDRND-PNVAAAVADLRESSNFWVAKYRKEKALLGRASFRDMY 127
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ +++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 128 SALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL 165
>gi|224082594|ref|XP_002306756.1| predicted protein [Populus trichocarpa]
gi|118489928|gb|ABK96761.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222856205|gb|EEE93752.1| predicted protein [Populus trichocarpa]
Length = 175
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y+K E++ +R ++ D D N +E+ +++ +R +K + G S+ ++
Sbjct: 75 YVKDTEEVIGKVRTTMNMDKSD-PNVADAVAVLRETSNSWVAKYRREKALLGRASFRDIY 133
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 134 SALNAVTGHYISFGPTAPIPSKRKARILEEMDTAEKAL 171
>gi|224066547|ref|XP_002302130.1| predicted protein [Populus trichocarpa]
gi|222843856|gb|EEE81403.1| predicted protein [Populus trichocarpa]
Length = 176
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 138 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191
Y+K +++ +R ++ D D +AN R ++S +++ +R +K + G
Sbjct: 76 YVKDTEDVINKVRTTVNMDKNDPNVADAVANLRETSNS-------WVAKYRREKALLGRA 128
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ ++ A+ ++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 129 SFRDMYSALNAVTGHYVSFGPTAPIPSKRRARILEEMDTAEKAL 172
>gi|255543290|ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
communis]
gi|223548669|gb|EEF50160.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
communis]
Length = 173
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y+K E++ +R ++ + D N +E+ +++ +R +KT+ G S+ ++
Sbjct: 73 YVKETGEVIDKIRSTINMEKND-PNVATAVAELRETSNSWVAKYRREKTLLGRTSFRDIY 131
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ +++ Y GP+AP+P + K+ IL ++D+AEK L
Sbjct: 132 SALNAVSGHYISFGPTAPIPAKRKARILEEMDSAEKAL 169
>gi|257471708|pdb|2KMF|A Chain A, Solution Structure Of Psb27 From Cyanobacterial
Photosystem Ii
Length = 115
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 130 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 8 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 66
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+ +
Sbjct: 67 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAERSI 111
>gi|257097067|pdb|2KND|A Chain A, Psb27 Structure From Synechocystis
Length = 110
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 130 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
SG L Y + ++ TLRE++ + P+D N + D+A+ I DY+S +R + G
Sbjct: 3 SGTGLTGNYSQDTLTVIATLREAI-DLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGG 61
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+S+ ++ A+ SLA +Y+ G + P+P ++K + + AE+ +
Sbjct: 62 LKSFTTMQTALNSLAGYYTSYG-ARPIPEKLKKRLQLEFTQAERSI 106
>gi|356543813|ref|XP_003540354.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Glycine max]
Length = 173
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y+K E++ +R ++ D D N +E+ +++ +R +K + G S+ ++
Sbjct: 73 YMKETEEVINKVRTTIVMDKND-PNVATAVAELRETSNSWVAKYRREKALLGRVSFRDMY 131
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 132 SALNAVSGHYISFGPTAPIPAKRRARILEEVDTAEKAL 169
>gi|308803258|ref|XP_003078942.1| unnamed protein product [Ostreococcus tauri]
gi|116057395|emb|CAL51822.1| unnamed protein product [Ostreococcus tauri]
Length = 226
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDI---ANFR-RNADSAKESIRDYLSNWRGQKTVAG 189
+P+ Y + AR++V LR SL+ + D+ A+ R + A+ AK++++ YLS + G
Sbjct: 106 VPERYARLARDVVDALRTSLEHEAVDVSASASERFKYAEPAKKAVKAYLS-YEGSADARE 164
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
SY ++ +A+R L++FY + G + PL E +++IL L A L
Sbjct: 165 SASYADIAEALRELSAFYKRNGATTPLTEETRTKILKLLTEASASL 210
>gi|297739253|emb|CBI28904.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 138 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191
Y+K +++ +R ++ D D +A+ R ++S +++ +R +K + G
Sbjct: 103 YVKETADVINKVRTTINMDKTDPDVATAVADLRDASNS-------WVAKYRREKALLGRP 155
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ ++ A+ +++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 156 SFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL 199
>gi|356549934|ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Glycine max]
Length = 169
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y+K E++ +R ++ D D N +E+ +++ +R +K + G S+ ++
Sbjct: 69 YVKETEEVINKVRTTIVMDKND-PNVATAVAELRETSNSWVAKYRREKALLGRASFRDIY 127
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 128 SALNAVSGHYISFGPTAPIPAKRRARILEEVDTAEKAL 165
>gi|225447221|ref|XP_002277789.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Vitis vinifera]
Length = 171
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 138 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191
Y+K +++ +R ++ D D +A+ R ++S +++ +R +K + G
Sbjct: 71 YVKETADVINKVRTTINMDKTDPDVATAVADLRDASNS-------WVAKYRREKALLGRP 123
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ ++ A+ +++ Y GP+AP+P + K+ IL ++DTAEK L
Sbjct: 124 SFRDMYSALNAVSGHYISFGPTAPIPAKRKARILEEMDTAEKAL 167
>gi|226491700|ref|NP_001147626.1| photosystem II 11 kD protein [Zea mays]
gi|194701306|gb|ACF84737.1| unknown [Zea mays]
gi|195612648|gb|ACG28154.1| photosystem II 11 kD protein [Zea mays]
gi|413955818|gb|AFW88467.1| photosystem II protein [Zea mays]
Length = 167
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESY 193
Y+ +E++ +R ++ D D + AD+ E +RD ++W R +K++ G S+
Sbjct: 67 YVSETKEVIGKVRSTIGLDKSDPSV----ADAVAE-LRDLSNSWVAKYRREKSLLGRPSF 121
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 122 REMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 163
>gi|159487195|ref|XP_001701619.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280838|gb|EDP06594.1| predicted protein [Chlamydomonas reinhardtii]
Length = 209
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIAN------FRRNADSAKESIRDYLSNWRGQKTV 187
LPK Y R+LVK L E L E + A+ RR AD AKE +R+++ WR V
Sbjct: 92 LPKEY----RQLVKRLSEGLSESIETEASGASEAEVRRAADPAKEVVREFVRKWRDNPRV 147
Query: 188 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ + ++ E+++A+ L FY G L V+ +L L A L
Sbjct: 148 SSDITHAEIKEALAELGEFYLAYGQRTKLTPPVRESVLRHLKAARSAL 195
>gi|357112354|ref|XP_003557974.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
[Brachypodium distachyon]
Length = 173
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 43/174 (24%)
Query: 66 VEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPN 125
+AA+SRR V++ S +L CG AP+P QA S+ DE
Sbjct: 35 AQAAASRRDVLAGSGLGAALLL---CG-APVPPQARAASD--DE---------------- 72
Query: 126 EKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW---- 181
Y +E++ +R ++ D D + AD+ E +R+ ++W
Sbjct: 73 ------------YTSETKEVIGKVRSTISMDKADP----KVADAVTE-LRELSNSWVAKY 115
Query: 182 RGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
R +K++ G +S+ ++ A+ +++ Y GP+AP+P + ++ IL ++D EK L
Sbjct: 116 RREKSLLGRQSFRDMYSALNAVSGHYISFGPTAPIPNKRRTRILEEMDAVEKSL 169
>gi|116786137|gb|ABK23991.1| unknown [Picea sitchensis]
Length = 184
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 113 GVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKE 172
GV G L E + L + Y K +E++ ++ ++ D+ N +A
Sbjct: 63 GVAG----LISLAEAAPAKASLEEDYSKETKEVINQVKSTI-----DMEKSNPNTSAAVA 113
Query: 173 SIRDYLSNW----RGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 228
++R+ +NW R +K +AG+ S+ + + +++ Y GP++P+P + K+ IL ++
Sbjct: 114 ALRETSNNWVAKYRREKQLAGKPSFSNMYSVLNAISGHYISFGPTSPIPAKRKARILEEM 173
Query: 229 DTAEKFL 235
D AEK L
Sbjct: 174 DVAEKAL 180
>gi|255639881|gb|ACU20233.1| unknown [Glycine max]
Length = 110
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 132 KVLPKAYLKSAR--ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
+VLPK + A E++ +R ++ D D N +E+ +++ +R +K + G
Sbjct: 2 QVLPKNNIVDAVTVEVINKVRTTIVMDKND-PNVATAVAELRETSNSWVAKYRREKALLG 60
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ ++ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 61 RVSFRDMYSALNAVSGHYISFGPTAPIPAKRRARILEEVDTAEKAL 106
>gi|242041037|ref|XP_002467913.1| hypothetical protein SORBIDRAFT_01g036240 [Sorghum bicolor]
gi|241921767|gb|EER94911.1| hypothetical protein SORBIDRAFT_01g036240 [Sorghum bicolor]
Length = 172
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 138 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191
Y+ +E++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 72 YVSETKEVIGKVRSTISLDKSDPSVADAVAELRELSNS-------WVAKYRREKSLLGRP 124
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 125 SFREMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 168
>gi|18379115|ref|NP_563687.1| photosystem II Psb27 protein [Arabidopsis thaliana]
gi|75180295|sp|Q9LR64.1|Y1360_ARATH RecName: Full=Thylakoid lumenal protein At1g03610, chloroplastic;
Flags: Precursor
gi|9280647|gb|AAF86516.1|AC002560_9 F21B7.21 [Arabidopsis thaliana]
gi|13899089|gb|AAK48966.1|AF370539_1 Unknown protein [Arabidopsis thaliana]
gi|14994277|gb|AAK73273.1| Unknown protein [Arabidopsis thaliana]
gi|21386971|gb|AAM47889.1| unknown protein [Arabidopsis thaliana]
gi|21536786|gb|AAM61118.1| unknown [Arabidopsis thaliana]
gi|332189467|gb|AEE27588.1| photosystem II Psb27 protein [Arabidopsis thaliana]
Length = 174
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 138 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 194
Y+K ++ +R +L K DP N +E+ +++ +R +K + G+ S+
Sbjct: 74 YIKDTSAVISKVRSTLSMQKTDP----NVADAVAELREASNSWVAKYRKEKALLGKASFR 129
Query: 195 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++ A+ +++ Y GP+AP+P + K+ IL +++TAEK L
Sbjct: 130 DIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKAL 170
>gi|226508326|ref|NP_001148428.1| photosystem II 11 kD protein [Zea mays]
gi|195619212|gb|ACG31436.1| photosystem II 11 kD protein [Zea mays]
Length = 170
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 138 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191
Y+ +E++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 70 YVSETKEVIGKVRSTINLDKSDPSVADAVAELRELSNS-------WVAKYRREKSLLGRP 122
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 123 SFREMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 166
>gi|223949701|gb|ACN28934.1| unknown [Zea mays]
gi|414866662|tpg|DAA45219.1| TPA: photosystem II protein [Zea mays]
Length = 170
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 138 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191
Y+ +E++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 70 YVSETKEVIGKVRSTINLDKSDPSVADAVAELRELSNS-------WVAKYRREKSLLGRP 122
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 123 SFREMYSALNAVSGHYISFGPTAPIPAKRRARILEEMDTAEKAL 166
>gi|302833718|ref|XP_002948422.1| hypothetical protein VOLCADRAFT_116830 [Volvox carteri f.
nagariensis]
gi|300266109|gb|EFJ50297.1| hypothetical protein VOLCADRAFT_116830 [Volvox carteri f.
nagariensis]
Length = 142
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 143 RELVKTLRESLKEDPK------DIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVEL 196
R+LVK L E L + + A RR AD AK+++R+++ WR V+G+ ++ E+
Sbjct: 26 RQLVKRLSEGLSDSIEAEASGASEAEVRRKADPAKDTVREFVRKWRDNPRVSGDITHAEV 85
Query: 197 EKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++A+ L FY G L V+ +L L A++ L
Sbjct: 86 KEALSELGEFYMAYGQRTKLTPPVRESVLKHLAAAKEAL 124
>gi|297843164|ref|XP_002889463.1| photosystem II family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335305|gb|EFH65722.1| photosystem II family protein [Arabidopsis lyrata subsp. lyrata]
Length = 174
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 138 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 194
Y+K ++ +R +L K DP N +E+ +++ +R +K + G+ S+
Sbjct: 74 YIKDTSAVISKVRSTLSMQKTDP----NVADAVAELREASNSWVAKYRKEKALLGKASFR 129
Query: 195 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++ A+ +++ Y GP+AP+P + K+ IL +++TAEK L
Sbjct: 130 DIYSALNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKAL 170
>gi|115452847|ref|NP_001050024.1| Os03g0333400 [Oryza sativa Japonica Group]
gi|108707991|gb|ABF95786.1| possible Photosystem II reaction center Psb27 protein, putative,
expressed [Oryza sativa Japonica Group]
gi|113548495|dbj|BAF11938.1| Os03g0333400 [Oryza sativa Japonica Group]
gi|125586152|gb|EAZ26816.1| hypothetical protein OsJ_10733 [Oryza sativa Japonica Group]
gi|218192770|gb|EEC75197.1| hypothetical protein OsI_11442 [Oryza sativa Indica Group]
Length = 165
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 138 YLKSARELVKTLRESLKEDPKD------IANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191
Y+ ++++ +R ++ D D +A R ++S +++ +R +K++ G
Sbjct: 65 YVSETKDVIGKVRSTINMDRADPGVADAVAELRELSNS-------WVAKYRREKSLLGRP 117
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ E+ A+ +++ Y GP+AP+P + ++ IL ++DTAEK L
Sbjct: 118 SFREMYSALNAVSGHYISFGPTAPIPNKRRARILEEMDTAEKAL 161
>gi|113953932|ref|YP_731225.1| photosystem II Psb27 protein [Synechococcus sp. CC9311]
gi|113881283|gb|ABI46241.1| possible photosystem II Psb27 protein [Synechococcus sp. CC9311]
Length = 140
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 133 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADS-AKESIRDYLSNWRGQKTVAGEE 191
L Y++ + T+ ++L P+D AN RR AD A++ I DY+S +R + V G
Sbjct: 36 TLTGDYVQDTVAVAHTIHDTLAL-PQDAAN-RREADGEARDLITDYVSRYRARPKVNGLS 93
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
S+ ++ A+ SLA Y+ + P+P +++ I +L AEK
Sbjct: 94 SFTTMQTALNSLAGHYNNY-TNRPVPEALRARIDKELGKAEK 134
>gi|428776922|ref|YP_007168709.1| photosystem II protein Psb27 [Halothece sp. PCC 7418]
gi|428691201|gb|AFZ44495.1| photosystem II protein Psb27 [Halothece sp. PCC 7418]
Length = 139
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 134 LPKAYLKSARELVKTLRESLK---EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
L Y + +++TLR +L+ +DP N A+E + DY + +R + VAG
Sbjct: 34 LTGNYRQDTLTVLETLRTTLEISVDDP----NREEIRAKAREQLNDYAARYRRDEEVAGL 89
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
S+ ++ A+ +LA++Y+ A + P+P VK + + E+ L
Sbjct: 90 RSFTTMQTALNALANYYTSAYATRPIPQRVKDRVSQEFAQVERAL 134
>gi|303287346|ref|XP_003062962.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455598|gb|EEH52901.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 130
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 134 LPKAYLKSARELVKTLRESLK---EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
LPK Y +AR + + L ESL+ +P + F+R A+ AKE+++ ++ +W G+
Sbjct: 13 LPKDYYAAARAVTRALTESLEFEASNPTNAERFKR-AEPAKEAVKTFIKDWASSPLARGD 71
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ ++ A++ L++FY G L E + +L L A + L
Sbjct: 72 RARDDIVLAVQELSAFYKANGSRVALSDETRRSVLEKLYDASEAL 116
>gi|218247959|ref|YP_002373330.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8801]
gi|257060719|ref|YP_003138607.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8802]
gi|218168437|gb|ACK67174.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8801]
gi|256590885|gb|ACV01772.1| photosystem II protein Psb27 [Cyanothece sp. PCC 8802]
Length = 135
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 193
L Y + +++TL +++ + P D A+ A+E I DY+S +R Q G S+
Sbjct: 32 LTGNYTQDTLAVIETLTKAI-DLPDDAADKTDVQTLAREQINDYISRYRRQSNSGGLRSF 90
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
++ A+ +LA +Y+ G S PLP ++K + +L A+
Sbjct: 91 TTMQTALNALAGYYTAYG-SRPLPEKLKKRLEQELKQAK 128
>gi|157412924|ref|YP_001483790.1| putative photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9215]
gi|157387499|gb|ABV50204.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9215]
Length = 145
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQTAV-DTPKDSPNKDEVRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|254525977|ref|ZP_05138029.1| photosystem II protein Psb27 [Prochlorococcus marinus str. MIT
9202]
gi|221537401|gb|EEE39854.1| photosystem II protein Psb27 [Prochlorococcus marinus str. MIT
9202]
Length = 145
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQTAV-DTPKDSPNKDEVRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|33861064|ref|NP_892625.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33639796|emb|CAE18966.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 145
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y K +VKTL+ ++ E PKD + + D + I DY+S +R + V +S+ ++
Sbjct: 46 YAKDTISVVKTLQIAV-ETPKDSPDKDKVRDESLALITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++A Y K + PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFATRPLPDKLKERLTKEFTLAEKMV 141
>gi|123968099|ref|YP_001008957.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. AS9601]
gi|123198209|gb|ABM69850.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. AS9601]
Length = 145
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQTAV-DTPKDSPNKDEVRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|352094747|ref|ZP_08955918.1| photosystem II protein Psb27 [Synechococcus sp. WH 8016]
gi|351681087|gb|EHA64219.1| photosystem II protein Psb27 [Synechococcus sp. WH 8016]
Length = 140
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 133 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEES 192
L Y++ + T+ ++L P+D AN + A++ I DY+S +R + V G S
Sbjct: 36 TLSGDYVQDTVAVAHTIHDTLAL-PQDAANRQEAEGEARDLITDYVSRYRARPKVNGLSS 94
Query: 193 YVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
+ ++ A+ SLA Y+ + P+P +++ I +L AEK
Sbjct: 95 FTTMQTALNSLAGHYNNY-TNRPVPDALRARIDKELGKAEK 134
>gi|390440128|ref|ZP_10228480.1| Photosystem II 11 kDa protein [Microcystis sp. T1-4]
gi|389836494|emb|CCI32604.1| Photosystem II 11 kDa protein [Microcystis sp. T1-4]
Length = 142
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADS-AKESIRDYLSNWRGQKTVAG 189
L Y K +++TL +L K+DP A A+S AKE I DY+S +R K G
Sbjct: 39 LTGNYGKDTLTVIETLTTALDLVKDDPNKAA-----AESQAKEQINDYISLYRRDKKSGG 93
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 94 LRSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 127
>gi|428771198|ref|YP_007162988.1| photosystem II protein Psb27 [Cyanobacterium aponinum PCC 10605]
gi|428685477|gb|AFZ54944.1| photosystem II protein Psb27 [Cyanobacterium aponinum PCC 10605]
Length = 135
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 155 EDPKD--IANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGP 212
E P D I R N A++ I DY+S +R +G +S+ ++ A+ SLA +Y+ G
Sbjct: 50 ETPADASIEVKRENQTLARKQINDYVSRYRKNNKYSGLKSFTTMQTALNSLAGYYTSYG- 108
Query: 213 SAPLPGEVKSEILNDLDTAE 232
+ P+P ++K +L + E
Sbjct: 109 NRPMPEKLKKRLLQEFKQVE 128
>gi|123965806|ref|YP_001010887.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9515]
gi|123200172|gb|ABM71780.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9515]
Length = 145
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + +VKTL+ ++ + PKD N D + I DY+S +R + V +S+ ++
Sbjct: 46 YTQDTISVVKTLQIAV-DTPKDSPNKNEVRDESLALITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++A Y K + PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFATRPLPDKLKERLTKEFSLAEKMV 141
>gi|67920837|ref|ZP_00514356.1| photosystem II 11 kD protein [Crocosphaera watsonii WH 8501]
gi|416379910|ref|ZP_11683992.1| Photosystem II protein Psb27 [Crocosphaera watsonii WH 0003]
gi|67856954|gb|EAM52194.1| photosystem II 11 kD protein [Crocosphaera watsonii WH 8501]
gi|357265766|gb|EHJ14486.1| Photosystem II protein Psb27 [Crocosphaera watsonii WH 0003]
Length = 134
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 145 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 204
+++TL +L + P D N + AKE I DY+S +R G S+ ++ A+ SLA
Sbjct: 42 VIETLTTAL-DLPNDAENKQEIKSLAKEQINDYISRYRRNGESGGLRSFTTMQTALNSLA 100
Query: 205 SFYSKAGPSAPLPGEVKSEILNDLDTAE 232
+Y+ G + PLP ++K + + AE
Sbjct: 101 GYYTSYG-NRPLPEKLKKRLKQEFKQAE 127
>gi|218438286|ref|YP_002376615.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7424]
gi|218171014|gb|ACK69747.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7424]
Length = 133
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 193
L Y + +++ TL ++ + PKD N AK+ I DY+S +R G S+
Sbjct: 30 LTGNYSQDTLKVINTLSAAI-DLPKDAPNQSEIQSQAKDEINDYISRYRRDSKSGGLRSF 88
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
++ A+ +LA +Y+ G S PLP ++K+ +
Sbjct: 89 TTMQTALNALAGYYTTYG-SRPLPEKLKNRL 118
>gi|145346186|ref|XP_001417574.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577801|gb|ABO95867.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 230
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDI----ANFRRNADSAKESIRDYLS--NWRGQKTV 187
+P+ Y + ARELV L SL+ + ++ + A AKE+++ Y+S G +
Sbjct: 109 VPRDYARVARELVDALSTSLEHEARNANKSPGERYKFAKPAKEAVKAYISYDGGGGSASA 168
Query: 188 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ SY ++ +A+R L++FY K G +A + EV+ IL+ L A L
Sbjct: 169 SSSASYADIAEALRELSAFYKKNGATAEMSAEVRDRILSRLYEARDLL 216
>gi|388498200|gb|AFK37166.1| unknown [Medicago truncatula]
Length = 170
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESY 193
Y+K E++ +R ++ D D N +A +RD ++W R +K + S+
Sbjct: 70 YVKETEEVISKVRTTITLDKND-----PNVATAVVELRDTSNSWVAKYRREKALLARASF 124
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
++ A+ +++ Y GP+AP+P + + IL +++ AEK L
Sbjct: 125 RDMYSALNAVSGHYISFGPTAPIPAKRRVRILEEIEVAEKSL 166
>gi|126695872|ref|YP_001090758.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9301]
gi|126542915|gb|ABO17157.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9301]
Length = 145
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y K +VKTL+ ++ + PKD N A I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQSAV-DTPKDSPNKDEIRSEALTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLSKEFSLAEKMV 141
>gi|33866304|ref|NP_897863.1| photosystem II Psb27 protein [Synechococcus sp. WH 8102]
gi|33639279|emb|CAE08287.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 8102]
Length = 141
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y++ + LRE + + P+D AN A+ I DY+S +R Q V G S+ ++
Sbjct: 42 YVEDTIAVAHNLREVI-DLPQDAANRGEAESEARALINDYMSRYRPQPRVNGLSSFTTMQ 100
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
A+ SLA Y+ + PLP + I +L AEK
Sbjct: 101 TALNSLAGHYASYA-NRPLPEALHDRIAKELGKAEK 135
>gi|224108039|ref|XP_002314699.1| predicted protein [Populus trichocarpa]
gi|222863739|gb|EEF00870.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 39/100 (39%)
Query: 129 KSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVA 188
K+ V + +KSAR++VK LRESL+EDPKD+ L N
Sbjct: 7 KAKSVCGRKGIKSARDVVKNLRESLEEDPKDV-----------------LPNH------- 42
Query: 189 GEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 228
++ KAG S+PLP EVKSEILNDL
Sbjct: 43 --------------MSKTPPKAG-SSPLPEEVKSEILNDL 67
>gi|126659116|ref|ZP_01730256.1| photosystem II 11 kD protein [Cyanothece sp. CCY0110]
gi|126619644|gb|EAZ90373.1| photosystem II 11 kD protein [Cyanothece sp. CCY0110]
Length = 134
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 193
L Y + ++++TL ++ + P D N + A+E I DY+S +R + G S+
Sbjct: 31 LSGNYSQDTLKVIETLTTAI-DLPNDAENKQDIQTLAREQINDYISRYRREDQSGGLRSF 89
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
++ A+ SLA +Y+ G S P+P ++K + + AE
Sbjct: 90 TTMQTALNSLAGYYTSYG-SRPIPEKLKKRLKQEFKQAE 127
>gi|422303605|ref|ZP_16390956.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9806]
gi|389791361|emb|CCI12787.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9806]
Length = 133
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
L Y K +++TL +L K+DP A AKE I DY+S +R K G
Sbjct: 30 LTGNYGKDTLTVIETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 85
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 86 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 118
>gi|172038546|ref|YP_001805047.1| photosystem II 11 kD protein [Cyanothece sp. ATCC 51142]
gi|354554113|ref|ZP_08973418.1| photosystem II protein Psb27 [Cyanothece sp. ATCC 51472]
gi|171700000|gb|ACB52981.1| photosystem II 11 kD protein [Cyanothece sp. ATCC 51142]
gi|353553792|gb|EHC23183.1| photosystem II protein Psb27 [Cyanothece sp. ATCC 51472]
Length = 134
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 193
L Y + ++++TL ++ + P D N ++ A+E I DY+S +R + G S+
Sbjct: 31 LSGNYSQDTLKVIETLTTAI-DLPNDADNKQQIQTLAREQINDYISRYRREDKSGGLRSF 89
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
++ A+ +LA +Y+ G S P+P ++K + + AE
Sbjct: 90 TTMQTALNALAGYYTSYG-SRPIPEKLKQRLKQEFKQAE 127
>gi|299471735|emb|CBN76956.1| photosystem II 11 kDa protein [Ectocarpus siliculosus]
Length = 206
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDP--KDIANFRRNADSAKESIRDYLSNWRGQKTVA 188
L K Y A ++V+ +R K DP DIAN + K+ + +++SN+R +
Sbjct: 102 LTKQYYPDASKMVRHMRYCTNMEKGDPYMADIAN------NCKKEMVEFVSNYRRSSNIN 155
Query: 189 GEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
G+ SY L +I LA Y+ GP P+P + + +L + E+ +
Sbjct: 156 GKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAI 202
>gi|326495336|dbj|BAJ85764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507340|dbj|BAJ95747.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516368|dbj|BAJ92339.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 138 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGE 190
Y+ E++ +R ++ K DPK AD+ E +R+ ++W R +K + G
Sbjct: 72 YVTETTEVIGKVRSTISMDKTDPK-------VADAVTE-LREMSNSWVAKYRREKALLGR 123
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+S+ ++ A+ +++ Y GP+AP+P + + IL ++D EK L
Sbjct: 124 QSFRDMYSALNAVSGHYISFGPTAPIPNKRRIRILEEMDAVEKSL 168
>gi|425439813|ref|ZP_18820128.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9717]
gi|389719876|emb|CCH96353.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9717]
Length = 142
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 144 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 203
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 52 ETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 107
Query: 204 ASFYSKAGPSAPLPGEVKSEI 224
A +Y+ G S P+P ++K +
Sbjct: 108 AGYYTAYG-SRPIPDKLKQRL 127
>gi|443646822|ref|ZP_21129500.1| photosystem II protein Psb27 [Microcystis aeruginosa DIANCHI905]
gi|159028849|emb|CAO90654.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335651|gb|ELS50115.1| photosystem II protein Psb27 [Microcystis aeruginosa DIANCHI905]
Length = 133
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 144 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 203
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 43 ETLTTALDVVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 98
Query: 204 ASFYSKAGPSAPLPGEVKSEI 224
A +Y+ G S P+P ++K +
Sbjct: 99 AGYYTAYG-SRPVPDKLKQRL 118
>gi|425450194|ref|ZP_18830026.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 7941]
gi|440751991|ref|ZP_20931194.1| photosystem II protein Psb27 [Microcystis aeruginosa TAIHU98]
gi|389769050|emb|CCI05978.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 7941]
gi|440176484|gb|ELP55757.1| photosystem II protein Psb27 [Microcystis aeruginosa TAIHU98]
Length = 133
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 144 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 203
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 43 ETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 98
Query: 204 ASFYSKAGPSAPLPGEVKSEI 224
A +Y+ G S P+P ++K +
Sbjct: 99 AGYYTAYG-SRPIPDKLKQRL 118
>gi|425434477|ref|ZP_18814946.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9432]
gi|425460156|ref|ZP_18839638.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9808]
gi|389676021|emb|CCH94893.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9432]
gi|389827151|emb|CCI21726.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9808]
Length = 142
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
L Y + +++TL +L K+DP A AKE I DY+S +R K G
Sbjct: 39 LTGNYGQDTLTVIETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 94
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 95 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 127
>gi|78778893|ref|YP_397005.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9312]
gi|78712392|gb|ABB49569.1| photosystem II reaction center Psb27 protein-like protein
[Prochlorococcus marinus str. MIT 9312]
Length = 145
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y K +VKTL+ ++ + PKD N + I DY+S +R + V +S+ ++
Sbjct: 46 YTKDTISVVKTLQIAV-DTPKDSPNKDEVRSESLTLITDYISRYRNRGMVNKTQSFTTMQ 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ ++A Y K S PLP ++K + + AEK +
Sbjct: 105 TALNAMAGHY-KNFASRPLPDKLKERLTKEFSLAEKMV 141
>gi|170079127|ref|YP_001735765.1| photosystem II 11 kD protein [Synechococcus sp. PCC 7002]
gi|169886796|gb|ACB00510.1| photosystem II 11 kD protein [Synechococcus sp. PCC 7002]
Length = 137
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 130 SGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAG 189
S L Y+ +V+ L E++ + P D N +A+ + +Y+S +R +G
Sbjct: 30 SASGLTGKYVDDTLLVVENLTEAI-QLPADAPNRSEVQAAARLQMNEYMSRYRRDPKTSG 88
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 231
S+ ++ A+ +LA +YS G S PLP ++K+ + + +TA
Sbjct: 89 LRSFTTMQTALNALAGYYSSFG-SRPLPEKLKTRLATEFETA 129
>gi|425465433|ref|ZP_18844742.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9809]
gi|389832332|emb|CCI24144.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9809]
Length = 142
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
L Y K ++++L +L K+DP A AKE I DY+S +R K G
Sbjct: 39 LTGNYGKDTLTVIESLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 94
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 95 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 127
>gi|166365090|ref|YP_001657363.1| photosystem II 11 kDa protein [Microcystis aeruginosa NIES-843]
gi|166087463|dbj|BAG02171.1| photosystem II 11 kDa protein [Microcystis aeruginosa NIES-843]
Length = 133
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
L Y K ++++L +L K+DP A AKE I DY+S +R K G
Sbjct: 30 LTGNYGKDTLTVIESLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 85
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
S+ ++ A+ SLA +Y+ G S P+P ++K +
Sbjct: 86 RSFTTMQTALNSLAGYYTAYG-SRPIPDKLKQRL 118
>gi|425469688|ref|ZP_18848603.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9701]
gi|389880427|emb|CCI38808.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9701]
Length = 142
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 144 ELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 203
E + T + +K+DP A AKE I DY+S +R K G S+ ++ A+ SL
Sbjct: 52 ESLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGLRSFTTMQTALNSL 107
Query: 204 ASFYSKAGPSAPLPGEVKSEI 224
A +Y+ G S P+P ++K +
Sbjct: 108 AGYYTAYG-SRPIPDKLKQRL 127
>gi|332705970|ref|ZP_08426043.1| photosystem II protein Psb27 [Moorea producens 3L]
gi|332355230|gb|EGJ34697.1| photosystem II protein Psb27 [Moorea producens 3L]
Length = 134
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 130 SGKVLPKAYLKSARELVKTLRESLK--EDPKDIANFRRNADSAKESIRDYLSNWRGQKTV 187
SG L Y + ++ LR++L+ ED D R + A + DY S +R ++V
Sbjct: 27 SGTGLTGDYRQDTITALQELRQALELPEDSPDKTAIR---EKATLLMNDYASRYRRDRSV 83
Query: 188 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ S+ + A+ SLA +YS + P+ PLP +VK + + E+ L
Sbjct: 84 STLNSFTTMRTAVNSLAGYYS-SYPNRPLPKKVKDRLEQEFSQVERSL 130
>gi|425448219|ref|ZP_18828198.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9443]
gi|425456966|ref|ZP_18836672.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9807]
gi|389731056|emb|CCI04849.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9443]
gi|389801825|emb|CCI19075.1| Photosystem II 11 kDa protein [Microcystis aeruginosa PCC 9807]
Length = 142
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
L Y + +++TL +L K+DP A AKE I DY+S +R K G
Sbjct: 39 LTGNYGQDTLTVIETLTTALDLVKDDPNKAAV----ESQAKEQINDYISLYRRDKKSGGL 94
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
S+ ++ A+ S+A +Y+ G S P+P ++K +
Sbjct: 95 RSFTTMQTALNSVAGYYTAYG-SRPIPDKLKQRL 127
>gi|326512754|dbj|BAK03284.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Query: 144 ELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNW----RGQKTVAGEESYVEL 196
E++ +R ++ K DPK AD+ E +R+ ++W R +K + G +S+ ++
Sbjct: 78 EVIGKVRSTISMDKTDPK-------VADAVTE-LREMSNSWVAKYRREKALLGRQSFRDM 129
Query: 197 EKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ +++ Y GP+AP+P + + IL ++D EK L
Sbjct: 130 YSALNAVSGHYISFGPTAPIPNKRRIRILEEMDAVEKSL 168
>gi|307151847|ref|YP_003887231.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7822]
gi|306982075|gb|ADN13956.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7822]
Length = 134
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 193
L Y + +L+ TL ++ E PK+ N A++ I DY+S +R + G S+
Sbjct: 31 LGGNYTQDTLKLIDTL-SAVIELPKEAENKAEIQSQARDEINDYISRYRRDQNSGGLRSF 89
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEI 224
++ A+ ++A +Y+ G + PLP ++K+ +
Sbjct: 90 TTMQTALNAIAGYYTSYG-TRPLPEKLKNRL 119
>gi|159903049|ref|YP_001550393.1| photosystem II reaction center Psb27 protein [Prochlorococcus
marinus str. MIT 9211]
gi|159888225|gb|ABX08439.1| possible Photosystem II reaction center Psb27 protein
[Prochlorococcus marinus str. MIT 9211]
Length = 144
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 145 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 204
+ +TL+E++ P D N D A E I Y+S +R + G S+ ++ A+ ++A
Sbjct: 52 VAQTLKETIA-IPDDSENRSEAKDEALELITQYISRYRNRPQFNGTNSFTTMQTALNAMA 110
Query: 205 SFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
Y K + PLP ++K + +L AEK +
Sbjct: 111 GHY-KTFANRPLPEKLKERLKKELSRAEKIV 140
>gi|443477525|ref|ZP_21067366.1| hypothetical protein Pse7429DRAFT_3149 [Pseudanabaena biceps PCC
7429]
gi|443017340|gb|ELS31805.1| hypothetical protein Pse7429DRAFT_3149 [Pseudanabaena biceps PCC
7429]
Length = 172
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 193
L Y+ + +KTLRE++ P++ N +A+ I Y+S +R G SY
Sbjct: 69 LTGDYIADTTDTIKTLREAINL-PENAENRAAVKTAARYKINAYVSRYRADHDKGGLYSY 127
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ A+ +LA +Y+ + A +P + + +L + D AE L
Sbjct: 128 TTMSTALNTLAGYYNGSMKRA-VPAKTRDRLLQEFDRAETAL 168
>gi|428780501|ref|YP_007172287.1| photosystem II protein Psb27 [Dactylococcopsis salina PCC 8305]
gi|428694780|gb|AFZ50930.1| photosystem II protein Psb27 [Dactylococcopsis salina PCC 8305]
Length = 134
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 132 KVLPKAYLKSARELVKTLRESLK---EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVA 188
K L Y + ++ TLR +L+ +DP+ R + A++ + +Y + +R + VA
Sbjct: 27 KGLTGDYRQDTLTVLDTLRTTLELSVDDPQ-REEVR---EKARKQLNEYAARYRRDEQVA 82
Query: 189 GEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
G S+ ++ A+ +LA++Y+ A + P+P +VK + + E+ L
Sbjct: 83 GLRSFTTMQTALNALANYYTSAYATRPIPDKVKDRVSQEFAQVERAL 129
>gi|194477322|ref|YP_002049501.1| possible Photosystem II Psb27 protein [Paulinella chromatophora]
gi|171192329|gb|ACB43291.1| possible Photosystem II Psb27 protein [Paulinella chromatophora]
Length = 138
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 127 KTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKT 186
T L Y+ + +TL ++ D+A + +S + I DY++ +R Q
Sbjct: 28 NTSGNSPLTGVYIDDTITVSQTLLNTITLAQDDMARSQAETES-RALINDYMARYRPQSQ 86
Query: 187 VAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 231
V G S+ ++ A+ SLA Y+ + PLP E+K + +L A
Sbjct: 87 VNGLSSFTTMQTAVNSLAGHYASYA-NRPLPEELKERLTKELKKA 130
>gi|116075298|ref|ZP_01472558.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9916]
gi|116067495|gb|EAU73249.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9916]
Length = 141
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 133 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSA-KESIRDYLSNWRGQKTVAGEE 191
L Y++ +V TL+ ++ D R A++A + I DY+S +R + V G
Sbjct: 37 TLTGDYVEDTVAVVHTLQSTIAMGQDD--EGRAEAETAATDLINDYMSRYRPRPQVNGLS 94
Query: 192 SYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
S+ ++ A+ SLA Y K + PLP +++ + +L AEK
Sbjct: 95 SFTTMQTALNSLAGHY-KTYANRPLPDTLRARVDKELGKAEK 135
>gi|302756747|ref|XP_002961797.1| hypothetical protein SELMODRAFT_77713 [Selaginella moellendorffii]
gi|302762899|ref|XP_002964871.1| hypothetical protein SELMODRAFT_83711 [Selaginella moellendorffii]
gi|300167104|gb|EFJ33709.1| hypothetical protein SELMODRAFT_83711 [Selaginella moellendorffii]
gi|300170456|gb|EFJ37057.1| hypothetical protein SELMODRAFT_77713 [Selaginella moellendorffii]
Length = 147
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P +A+ R++++S +++ +R +K+VAG+ S+ + + +++ Y GPS+ +
Sbjct: 72 PNAVASLRQSSNS-------WVAKYRREKSVAGKPSFSNMYSVLNAISGHYISFGPSSTI 124
Query: 217 PGEVKSEILNDLDTAEKFL 235
P + + IL ++ AEK L
Sbjct: 125 PAKRQQRILEEVKDAEKAL 143
>gi|428221289|ref|YP_007105459.1| hypothetical protein Syn7502_01221 [Synechococcus sp. PCC 7502]
gi|427994629|gb|AFY73324.1| hypothetical protein Syn7502_01221 [Synechococcus sp. PCC 7502]
Length = 160
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 126 EKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQK 185
EK +G + Y++ + +VK+LR ++ DPKD D A+ I Y S +R
Sbjct: 51 EKANAG--MTGNYVEDTKAVVKSLRYAVGLDPKDPNKIAAQTD-ARYKINAYASRYRRDS 107
Query: 186 TVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 229
G S+ L A+ +LAS+Y+ + +P +V+ ++ +LD
Sbjct: 108 EKLGLTSFTTLRTALNALASYYNGTTKRS-VPPKVRDRVILELD 150
>gi|78212242|ref|YP_381021.1| photosystem II Psb27 protein [Synechococcus sp. CC9605]
gi|78196701|gb|ABB34466.1| possible photosystem II Psb27 protein [Synechococcus sp. CC9605]
Length = 141
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P+D A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PL
Sbjct: 60 PQDDPTHAEAEADARALINDYMSRYRPQPRVNGLSSFTTMQTALNSLAGHYASYA-NRPL 118
Query: 217 PGEVKSEILNDLDTAEK 233
P + I +L+ AEK
Sbjct: 119 PEALHDRIAKELNKAEK 135
>gi|254414522|ref|ZP_05028288.1| photosystem II protein Psb27 [Coleofasciculus chthonoplastes PCC
7420]
gi|196178752|gb|EDX73750.1| photosystem II protein Psb27 [Coleofasciculus chthonoplastes PCC
7420]
Length = 132
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 155 EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSA 214
E P D + A++SI +Y+S +R +VA S+ + A+ SLA +YS + P+
Sbjct: 49 ELPDDAPDKAEAQSKARQSINEYISRYRRDGSVANLSSFSTMRTALNSLAGYYS-SYPNR 107
Query: 215 PLPGEVKSEILNDLDTAEKFL 235
PLP ++K + + E+ +
Sbjct: 108 PLPQKLKERLEQEFRQVERAI 128
>gi|75906801|ref|YP_321097.1| photosystem II 11 kD protein [Anabaena variabilis ATCC 29413]
gi|75700526|gb|ABA20202.1| photosystem II 11 kD protein [Anabaena variabilis ATCC 29413]
Length = 159
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 138 YLKSARELVKTLRESLK--EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVE 195
Y + +V TLR++L+ ED D A + A++ I D+ + ++ +V+G S+
Sbjct: 60 YRQDTLAVVNTLRQALEITEDSPDKAALQ---AEARQKINDFSARYQRVNSVSGLNSFTT 116
Query: 196 LEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ A+ SLA YS + P+ P+P ++KS + + E L
Sbjct: 117 MRTALNSLAGHYS-SYPNRPVPQKLKSRLEQEFKQVESAL 155
>gi|260435978|ref|ZP_05789948.1| photosystem II protein Psb27 [Synechococcus sp. WH 8109]
gi|260413852|gb|EEX07148.1| photosystem II protein Psb27 [Synechococcus sp. WH 8109]
Length = 147
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P+D A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PL
Sbjct: 66 PQDDPTHAEVEADARALINDYMSRYRPQPRVNGLSSFTTMQTALNSLAGHYASYA-NRPL 124
Query: 217 PGEVKSEILNDLDTAEK 233
P + I +L+ AEK
Sbjct: 125 PEALHDRIAKELNKAEK 141
>gi|449017142|dbj|BAM80544.1| photosystem II protein Psb27 [Cyanidioschyzon merolae strain 10D]
Length = 196
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + A ++V+++R + + + + D+ ++ + D+++ +R VAG S+ L
Sbjct: 96 YHEDATQVVQSMRTVTRLE-RGTPGMKEKVDATRKQMNDFVALYRRNPNVAGAVSFSTLY 154
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
AI +LA ++ G + P+P + K + L+ E+ L
Sbjct: 155 TAINTLAGHFASYGSTYPVPEKRKKRLEQQLNDVERAL 192
>gi|168036851|ref|XP_001770919.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677783|gb|EDQ64249.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 104
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 138 YLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 194
Y ++++ +R +L K DP A + ++S ++++ +R K VAG+ S+
Sbjct: 4 YKSETQDMIGQVRSTLAMEKTDPNKAAAVAK----LRQSGNEWVAKYRKAKKVAGKPSFS 59
Query: 195 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ I +++ Y G + P+P + K IL+++ AEK L
Sbjct: 60 NMYSVINAISGHYVSFGATYPIPAKRKDRILDEVKDAEKAL 100
>gi|307103708|gb|EFN51966.1| hypothetical protein CHLNCDRAFT_59045 [Chlorella variabilis]
Length = 176
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 168 DSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILND 227
+S ++ I D+++ +R +G SY A+ ++A + G +AP+P + ++ +
Sbjct: 105 ESVRKEINDWVARYRRDTAFSGRPSYGNTYSAVNAMAGHLNSFGATAPIPKKRLERLVKE 164
Query: 228 LDTAEKFL 235
LD AE+FL
Sbjct: 165 LDDAERFL 172
>gi|298489765|ref|YP_003719942.1| photosystem II protein Psb27 ['Nostoc azollae' 0708]
gi|298231683|gb|ADI62819.1| photosystem II protein Psb27 ['Nostoc azollae' 0708]
Length = 134
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + +V TLR++++ P+D A+ A++ I D+ + ++ +V+G S+ +
Sbjct: 35 YRQDTLAVVNTLRQAIEVSPEDPNKAALQAE-ARQKINDFSARYQRVNSVSGLNSFTTMR 93
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
A+ SLA YS P+ P+P ++K+ + + D E
Sbjct: 94 TALNSLAGHYSSY-PNRPIPEKLKNRLELEFDRVE 127
>gi|412988356|emb|CCO17692.1| predicted protein [Bathycoccus prasinos]
Length = 235
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 134 LPKAY---LKSARELVKTLRESLKEDPKDIANFR-RNADSAKESIRDYLSNWRGQKTVAG 189
+PK Y L+SA EL+ E + P + R AD AK+++++Y+ W+G+
Sbjct: 106 VPKEYAEKLRSACELLLKSIEYERAHPSASVSERFAAADPAKQAVKEYIQTWQGRPETRD 165
Query: 190 EESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEIL 225
E+ V + +R LA +Y K G L E++ +++
Sbjct: 166 LETSVITGEVLRELARYYKKNGSQVALDAELRDDVV 201
>gi|318041156|ref|ZP_07973112.1| putative photosystem II reaction center Psb27 protein
[Synechococcus sp. CB0101]
Length = 135
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P D SA+ I DY++ +R Q V G S+ ++ A+ SLA Y+ P+ P+
Sbjct: 54 PADDPGRSEAETSARALINDYMARYRPQPKVNGLASFTTMQTALNSLAGHYANY-PNRPV 112
Query: 217 PGEVKSEILNDLDTAE 232
P ++ + +L AE
Sbjct: 113 PDALRDRVSKELKKAE 128
>gi|88807668|ref|ZP_01123180.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 7805]
gi|88788882|gb|EAR20037.1| possible photosystem II Psb27 protein [Synechococcus sp. WH 7805]
Length = 141
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 133 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEES 192
+L Y++ +V L+ +L P D + + A + I DY+S +R + V G S
Sbjct: 37 LLSGDYVEDTVAVVHMLQNTLAL-PSDSEGLQDSEHEAHDLINDYMSRYRPRPQVNGLSS 95
Query: 193 YVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
+ ++ A+ SL Y+ + P+P +K+ + +L AEK
Sbjct: 96 FTTMQTALNSLQGHYNTY-TNRPVPDALKTRVEKELSKAEK 135
>gi|78185233|ref|YP_377668.1| photosystem II Psb27 protein [Synechococcus sp. CC9902]
gi|78169527|gb|ABB26624.1| possible photosystem II Psb27 protein [Synechococcus sp. CC9902]
Length = 141
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P+D + + A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PL
Sbjct: 60 PQDDPSHAQAESDARSLITDYVSRYRPQPRVNGLSSFTTMQTALNSLAGHYANYA-NRPL 118
Query: 217 PGEVKSEILNDLDTAEK 233
P + + +L+ A+K
Sbjct: 119 PEALHDRLAKELNKAQK 135
>gi|116072889|ref|ZP_01470154.1| possible photosystem II Psb27 protein [Synechococcus sp. BL107]
gi|116064415|gb|EAU70176.1| possible photosystem II Psb27 protein [Synechococcus sp. BL107]
Length = 141
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P+D + + + A+ I DY+S +R Q V G S+ ++ A+ SLA Y+ + PL
Sbjct: 60 PQDDPSHAQAENDARSLITDYVSRYRPQPRVNGLSSFTTMQTALNSLAGHYANYA-NRPL 118
Query: 217 PGEVKSEILNDLDTAEK 233
P + + +L A+K
Sbjct: 119 PEALHDRLAKELTKAQK 135
>gi|428309367|ref|YP_007120344.1| photosystem II protein Psb27 [Microcoleus sp. PCC 7113]
gi|428250979|gb|AFZ16938.1| photosystem II protein Psb27 [Microcoleus sp. PCC 7113]
Length = 136
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 128 TKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTV 187
T S L Y + L++ LR ++ E P+ + +A++SI ++ S +R +V
Sbjct: 27 TTSVSGLTGDYRQDTLTLLQNLRTAI-ELPEGTPDKAEAQSNARQSINEFASRYRRDSSV 85
Query: 188 AGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A S+ + A+ SLA YS + P+ PLP ++K+ + + E L
Sbjct: 86 ANLSSFTTMRTALNSLAGHYS-SYPNRPLPQKLKNRLEQEFRQVESAL 132
>gi|148238957|ref|YP_001224344.1| photosystem II protein Psb27 [Synechococcus sp. WH 7803]
gi|147847496|emb|CAK23047.1| Photosystem II protein Psb27 [Synechococcus sp. WH 7803]
Length = 141
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 133 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEES 192
+L Y++ +V L+ +L P D + + + A + I DY+S +R + V G S
Sbjct: 37 LLSGDYVEDTVAVVHMLQNTLAL-PADAESLQDSEHEAHDLINDYMSRYRPRPQVNGLSS 95
Query: 193 YVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
+ ++ A+ SL Y+ + P+P +K+ + +L AEK
Sbjct: 96 FTTMQTALNSLQGHYNTY-TNRPVPEALKTRVEKELSKAEK 135
>gi|428202648|ref|YP_007081237.1| photosystem II protein Psb27 [Pleurocapsa sp. PCC 7327]
gi|427980080|gb|AFY77680.1| photosystem II protein Psb27 [Pleurocapsa sp. PCC 7327]
Length = 134
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESY 193
L Y + +++TL ++ P D N A++ I DY++ +R + G S+
Sbjct: 31 LTGNYSQDTLNVIETLTTAIDLSP-DAPNKAEIQSLARKQINDYIARYRRKDKSDGLRSF 89
Query: 194 VELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
++ A+ SLA +Y+ G + PLP ++KS + + + A+
Sbjct: 90 TTMQTALNSLAGYYTAYG-NRPLPEKLKSRLKQEFNQAK 127
>gi|428772403|ref|YP_007164191.1| photosystem II protein Psb27 [Cyanobacterium stanieri PCC 7202]
gi|428686682|gb|AFZ46542.1| photosystem II protein Psb27 [Cyanobacterium stanieri PCC 7202]
Length = 134
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 168 DSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILND 227
D ++ I DY+S +R G +S+ ++ A+ SLA +Y+ G + P+P ++K + +
Sbjct: 64 DETRKQINDYISRYRKNSNYGGLKSFTTMQTALNSLAGYYTSYG-NRPIPEKLKKRLNQE 122
Query: 228 LDTAE 232
E
Sbjct: 123 FKQVE 127
>gi|434396698|ref|YP_007130702.1| photosystem II protein Psb27 [Stanieria cyanosphaera PCC 7437]
gi|428267795|gb|AFZ33736.1| photosystem II protein Psb27 [Stanieria cyanosphaera PCC 7437]
Length = 134
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 170 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 229
A++ I DY S +R AG S+ ++ A+ +LA +YS G PLP ++K + +
Sbjct: 66 ARQQISDYASRYRRDAKTAGLRSFTTMQTALNALAGYYSSYGIR-PLPDKLKQRLQQEFK 124
Query: 230 TAE 232
E
Sbjct: 125 QVE 127
>gi|452821958|gb|EME28982.1| photosystem II Psb27 protein [Galdieria sulphuraria]
Length = 193
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 134 LPKAYLKSARELVKTLRESL---KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGE 190
L Y + R +V++LR + ++ P+ + +R ++ + D++S +R VAG
Sbjct: 89 LTGQYEQDVRNMVESLRMACDLQRDTPEHDSTVQR----IRKQMSDFVSFYRRNPNVAGS 144
Query: 191 ESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
S+ + AI ++A Y+ G P+P + K+ + E+
Sbjct: 145 PSFSTIYTAINTVAGHYTTFGTEYPIPEKRKARLEQQFKDIER 187
>gi|17228753|ref|NP_485301.1| photosystem II 11 kD protein [Nostoc sp. PCC 7120]
gi|17130605|dbj|BAB73215.1| photosystem II 11 kD protein [Nostoc sp. PCC 7120]
Length = 133
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 138 YLKSARELVKTLRESLK--EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVE 195
Y + +V TLR++L+ ED D + A++ I D+ + ++ +V+G S+
Sbjct: 34 YRQDTLAVVNTLRQALEITEDSPDKTALQ---AEARQKINDFSARYQRVNSVSGLNSFTT 90
Query: 196 LEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ A+ SLA YS + P+ P+P ++KS + + E L
Sbjct: 91 MRTALNSLAGHYS-SYPNRPVPQKLKSRLEQEFKQVESAL 129
>gi|428207653|ref|YP_007092006.1| photosystem II protein Psb27 [Chroococcidiopsis thermalis PCC 7203]
gi|428009574|gb|AFY88137.1| photosystem II protein Psb27 [Chroococcidiopsis thermalis PCC 7203]
Length = 151
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + +++ LR ++ E P+D N A++ I D+ + ++ ++ G S+ +
Sbjct: 52 YRQDTLDVIGVLRNAI-ELPQDAPNKGEIQAEARKKINDFAARYQRNGSLTGLSSFTTMR 110
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEI 224
A+ SLA YS P+ PLP ++K +
Sbjct: 111 TALNSLAGHYSSY-PNRPLPAKLKQRL 136
>gi|307728016|ref|YP_003911229.1| FAD linked oxidase domain-containing protein [Burkholderia sp.
CCGE1003]
gi|307588541|gb|ADN61938.1| FAD linked oxidase domain protein [Burkholderia sp. CCGE1003]
Length = 485
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 28/143 (19%)
Query: 8 FNLVHLLFFQNYIIAFFVSAS-------------LCTSFLMLSFINLFCFFTASLWK--A 52
L H + Y+I FV+ + + + ++ F+ W A
Sbjct: 345 MGLTHDIAVPTYLIPTFVAQAGAALAEHYPAAVPVIVGHMGDGNLHYIAMFSHESWAQVA 404
Query: 53 DKLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEKEE 112
DK H+++ V H++ + A+ + G+ L V E+MS ++E+E
Sbjct: 405 DKPHTQSKV-----------SHLLYDIAAAMGGTFSAEHGIGSLHV--EEMSIYKNEQEL 451
Query: 113 GVVGAIKSLFDPNEKTKSGKVLP 135
++ +K LFDPN+ G+VLP
Sbjct: 452 AMMRQVKDLFDPNDTMNPGRVLP 474
>gi|87123889|ref|ZP_01079739.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9917]
gi|86168458|gb|EAQ69715.1| possible photosystem II Psb27 protein [Synechococcus sp. RS9917]
Length = 145
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P+D A+ A+ I DY+S +R + V G S+ ++ A+ SLA Y+ + PL
Sbjct: 64 PQDDADRPEAEAEARTLINDYMSRYRPRPQVNGLASFTTMQTALNSLAGHYNTYA-NRPL 122
Query: 217 PGEVKSEILNDLDTAEK 233
P +K + +L AE+
Sbjct: 123 PEGLKERVDKELTKAER 139
>gi|308501939|ref|XP_003113154.1| hypothetical protein CRE_25529 [Caenorhabditis remanei]
gi|308265455|gb|EFP09408.1| hypothetical protein CRE_25529 [Caenorhabditis remanei]
Length = 1375
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 126 EKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNW-RGQ 184
E T + PK+ + S EL++ +RES KED K + RR +++ + ++YL N +
Sbjct: 48 EDTMCSETPPKSRIPSREELLEMIRESEKEDHKYSEHARRKRQTSRITYQEYLDNLGKAD 107
Query: 185 KTVAGEESYVEL 196
V EE ++E+
Sbjct: 108 YDVRIEEGWLEI 119
>gi|58270290|ref|XP_572301.1| NADPH dehydrogenase [Cryptococcus neoformans var. neoformans JEC21]
gi|134117710|ref|XP_772489.1| hypothetical protein CNBL1040 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255103|gb|EAL17842.1| hypothetical protein CNBL1040 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228559|gb|AAW44994.1| NADPH dehydrogenase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 427
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 44 FFTASLWKADKLHSRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDM 103
F A LW RT +V + +IS S+ +V T GL P P+ ED+
Sbjct: 107 IFVAQLWH----QGRTRMV-------ENEYAIISSSAVPIVKSFTGLPGLKPRPMTLEDI 155
Query: 104 SNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKS 141
+ E + V IK+ FD E + LP+ +L S
Sbjct: 156 ERVKKEYAQAAVNCIKAGFDGVEIHGANGYLPEQFLHS 193
>gi|254431371|ref|ZP_05045074.1| photosystem II protein Psb27 [Cyanobium sp. PCC 7001]
gi|197625824|gb|EDY38383.1| photosystem II protein Psb27 [Cyanobium sp. PCC 7001]
Length = 143
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 170 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 229
A+ I DY++ +R + V G S+ ++ A+ SLA Y+ P+ P+P ++ + +L
Sbjct: 75 ARGLINDYMARYRPRTAVHGLASFTTMQTALNSLAGHYANY-PNRPVPEALRDRVTKELQ 133
Query: 230 TAEK 233
AE+
Sbjct: 134 KAER 137
>gi|195393920|ref|XP_002055600.1| GJ19448 [Drosophila virilis]
gi|194150110|gb|EDW65801.1| GJ19448 [Drosophila virilis]
Length = 888
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 93 LAPLPVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRES 152
L P P Q D+ +++E +V + + PN + ++ K L K + REL+K RE+
Sbjct: 526 LRPAPAQENDVEL-HEQQESKLVSSATAAPPPNTR-RTTKYLTKILASNLRELLKRERET 583
Query: 153 LKEDPK----DIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
++ P DI+ + N D E + LS+ T+ G ++ E
Sbjct: 584 KRQRPAHFGVDISKLQHNIDGWTEQEYNSLSHRPSTPTIRGRSKHIPTE 632
>gi|255081690|ref|XP_002508067.1| predicted protein [Micromonas sp. RCC299]
gi|226523343|gb|ACO69325.1| predicted protein [Micromonas sp. RCC299]
Length = 183
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 176 DYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
D+++ +R K + G SY + A+ +++ Y+ G PLP + K +L + +TAE
Sbjct: 120 DWVARYRRDKGITGRPSYGNVYSALNAVSGHYNNFGTKYPLPQKRKDRVLQEFETAE 176
>gi|317969640|ref|ZP_07971030.1| putative photosystem II reaction center Psb27 protein
[Synechococcus sp. CB0205]
Length = 136
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 169 SAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDL 228
SA+ I DY++ +R Q G S+ ++ A+ SLA Y+ P+ P+P +K + +L
Sbjct: 67 SARALINDYMARYRPQAKFNGLASFTTMQTALNSLAGHYANY-PNRPVPDALKERLNKEL 125
Query: 229 DTAE 232
AE
Sbjct: 126 KKAE 129
>gi|443321947|ref|ZP_21050984.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 73106]
gi|442788339|gb|ELR98035.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 73106]
Length = 133
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 170 AKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLD 229
A+ I DY+S +R + +G S+ ++ A+ +LA +Y+ G S PLP ++K+ + +
Sbjct: 65 ARLQINDYISRYRREPKSSGLRSFTTMQTAMNALAGYYTSYG-SRPLPEKLKNRLEQEFQ 123
Query: 230 TAE 232
E
Sbjct: 124 QVE 126
>gi|158337545|ref|YP_001518720.1| photosystem II protein Psb27 [Acaryochloris marina MBIC11017]
gi|158307786|gb|ABW29403.1| photosystem II protein Psb27 [Acaryochloris marina MBIC11017]
Length = 136
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P D N N +A I +Y+S +R + +AG S++ + A+ LA Y+ + P+ PL
Sbjct: 53 PDDDPNKAENQAAAGALISEYVSRYRRKPKLAGSASFMTMATALNGLAGHYN-SYPNRPL 111
Query: 217 PGEVKSEILNDLDTAE 232
P +K + + A+
Sbjct: 112 PQRLKDRLEQEFKQAK 127
>gi|427734755|ref|YP_007054299.1| photosystem II protein Psb27 [Rivularia sp. PCC 7116]
gi|427369796|gb|AFY53752.1| photosystem II protein Psb27 [Rivularia sp. PCC 7116]
Length = 145
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + +V LRE+L P D A+ A++ I ++ + ++ +V+G S+ +
Sbjct: 46 YRQDTLNIVNVLREALAS-PDDAADKAAVQAEARKKINEFAARYQRNTSVSGLSSFTTMR 104
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ SLA YS + P+ P+P ++K+ + + E L
Sbjct: 105 TALNSLAGHYS-SYPNRPVPEKLKNRLEKEFKQVEAAL 141
>gi|428300966|ref|YP_007139272.1| photosystem II protein Psb27 [Calothrix sp. PCC 6303]
gi|428237510|gb|AFZ03300.1| photosystem II protein Psb27 [Calothrix sp. PCC 6303]
Length = 132
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + ++ TLR +L E P D N A++ I D+ S ++ +V S+ +
Sbjct: 33 YSQDTLTVISTLRNAL-ELPNDAENKIAIQSEARQKINDFYSRYQRSNSVGTLSSFTTMR 91
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ SLA YS + P+ P+P ++K + + E L
Sbjct: 92 TALNSLAGHYS-SYPNRPVPQKLKDRLEQEFAQVEAAL 128
>gi|323450849|gb|EGB06728.1| hypothetical protein AURANDRAFT_7494, partial [Aureococcus
anophagefferens]
Length = 102
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y A+++V +R + D K + + A + K+ + D+++ +R V+G++S+ L
Sbjct: 2 YYTDAQKVVAHMRLATSLD-KGAPDMEKIALNTKKEMIDFVAFYRRFTNVSGKQSFSTLY 60
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEK 233
AI LA Y+ GP P+P + + + + EK
Sbjct: 61 TAINVLAGHYTSYGPKFPVPEKRRKRLYQEYAEIEK 96
>gi|359460982|ref|ZP_09249545.1| putative photosystem II reaction center Psb27 protein
[Acaryochloris sp. CCMEE 5410]
Length = 120
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 157 PKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216
P D N N +A I +Y+S +R + +AG S++ + A+ LA Y+ + P+ PL
Sbjct: 37 PDDDPNKAENQAAAGALISEYVSRYRRKPKLAGSASFMTMATALNGLAGHYN-SYPNRPL 95
Query: 217 PGEVKSEILNDLDTAE 232
P +K + + A+
Sbjct: 96 PQRLKDRLEQEFKQAK 111
>gi|434392457|ref|YP_007127404.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 7428]
gi|428264298|gb|AFZ30244.1| photosystem II protein Psb27 [Gloeocapsa sp. PCC 7428]
Length = 134
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + +V TLR +L + P D A++ I ++ + ++ +VAG S+ +
Sbjct: 35 YRQDTLAVVNTLRNAL-DLPDDAPEKAEAQTEARQKINEFAARYQRDGSVAGLSSFTTMR 93
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ SLA YS + P+ P+P ++K + + E L
Sbjct: 94 TALNSLAGHYS-SYPNRPVPKKLKQRLEQEFKQVEMAL 130
>gi|113475412|ref|YP_721473.1| photosystem II 11 kD protein [Trichodesmium erythraeum IMS101]
gi|110166460|gb|ABG51000.1| photosystem II 11 kD protein [Trichodesmium erythraeum IMS101]
Length = 131
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 114 VVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKES 173
+V AI + N T SG Y + L+ +L+ ++ E P++ A+++
Sbjct: 13 LVCAIGLMGCSNPSTLSGN-----YSEDTLSLINSLKTAI-ELPENTEAKSEAQAIARQA 66
Query: 174 IRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232
I DY S +R +V+ S+ + A+ SLA YS + P+ P+P ++K + + E
Sbjct: 67 INDYASRYRRDNSVSSLPSFTTMRTALDSLAGHYS-SYPNRPVPDKLKKRLAQEFKQVE 124
>gi|383863465|ref|XP_003707201.1| PREDICTED: charged multivesicular body protein 7-like [Megachile
rotundata]
Length = 438
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 109 EKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESL--KEDPKDIANFRRN 166
EK ++ I++L + T + + AY K+ +++K L ES + D +D+ +
Sbjct: 289 EKRSQILENIQNLISTIQNTHTNTAVLSAY-KTGSDVLKKLNESCLSESDVRDVMDDLSE 347
Query: 167 ADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAP 215
A ++ I LS +T+ G++SY +LEK + L PSAP
Sbjct: 348 ALDEQKEIESILS-----ETMKGDDSYTDLEKELAELIELDENVLPSAP 391
>gi|386761149|ref|YP_006234784.1| ATP-dependent protease La [Helicobacter cinaedi PAGU611]
gi|385146165|dbj|BAM11673.1| ATP-dependent protease La [Helicobacter cinaedi PAGU611]
Length = 802
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 106 GQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKT--LRESLKEDPKDIANF 163
+D+ EE ++G I + + + K K + ++ K L+E LK+ K++
Sbjct: 182 AKDDVEERILGLIDYIIEETQAQKLQKEIKNKVHNKMEQVNKEYFLKEQLKQIQKELGT- 240
Query: 164 RRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVK 221
++ E I YL K GE +Y E+ K I+ L+ + +G + L V+
Sbjct: 241 ---DNTRDEEIEQYLQKLNALKPFMGENAYKEVHKQIKRLSRMHQDSGDANILQNYVE 295
>gi|313144610|ref|ZP_07806803.1| ATP-dependent protease LA [Helicobacter cinaedi CCUG 18818]
gi|313129641|gb|EFR47258.1| ATP-dependent protease LA [Helicobacter cinaedi CCUG 18818]
Length = 802
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 106 GQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKT--LRESLKEDPKDIANF 163
+D+ EE ++G I + + + K K + ++ K L+E LK+ K++
Sbjct: 182 AKDDVEERILGLIDYIIEETQAQKLQKEIKNKVHNKMEQVNKEYFLKEQLKQIQKELGT- 240
Query: 164 RRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVK 221
++ E I YL K GE +Y E+ K I+ L+ + +G + L V+
Sbjct: 241 ---DNTRDEEIEQYLQKLNALKPFMGENAYKEVHKQIKRLSRMHQDSGDANILQNYVE 295
>gi|418531745|ref|ZP_13097656.1| lambda family phage tail tape measure protein [Comamonas
testosteroni ATCC 11996]
gi|371451247|gb|EHN64288.1| lambda family phage tail tape measure protein [Comamonas
testosteroni ATCC 11996]
Length = 873
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 127 KTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRN----------ADSAKESIRD 176
K K+ A+++ ++ +E+L DP + A +RN A +A D
Sbjct: 320 KMKASASEASAHVERLTGTLERHQEALSRDPGN-ARLQRNVSKTRDLLFQAQNAAVDASD 378
Query: 177 YLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
L NW QK V + VEL + + YS P P G+ KS+ D + AEKFL
Sbjct: 379 ALKNWANQKDV--QVPKVELPEPPKPKGP-YSPVTPPKPDGGKGKSQAEKDQEAAEKFL 434
>gi|396078252|dbj|BAM31628.1| ATP-dependent protease [Helicobacter cinaedi ATCC BAA-847]
Length = 802
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 106 GQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKT--LRESLKEDPKDIANF 163
+D+ EE ++G I + + + K K + ++ K L+E LK+ K++
Sbjct: 182 AKDDVEERILGLIDYIIEETQAQKLQKEIKNKVHNKMEQVNKEYFLKEQLKQIQKELGT- 240
Query: 164 RRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAG 211
++ E I YL K GE +Y E+ K I+ L+ + +G
Sbjct: 241 ---DNTRDEEIEQYLQKLNALKHFMGENAYKEVHKQIKRLSRMHQDSG 285
>gi|427708983|ref|YP_007051360.1| photosystem II protein Psb27 [Nostoc sp. PCC 7107]
gi|427361488|gb|AFY44210.1| photosystem II protein Psb27 [Nostoc sp. PCC 7107]
Length = 131
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 138 YLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELE 197
Y + +V TLR++L+ AD A++ I D+ + ++ ++G S+ +
Sbjct: 32 YRQDTLTVVSTLRKALEVSESSPDRVELQAD-ARQKINDFSARYQRAGAISGLSSFTTMR 90
Query: 198 KAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
A+ SLA YS + P+ P+P ++K+ + + E L
Sbjct: 91 TALNSLAGHYS-SYPNRPVPQKLKTRLEQEFQQVESAL 127
>gi|22300006|ref|NP_683253.1| photosystem II 11 kD protein [Thermosynechococcus elongatus BP-1]
gi|22296191|dbj|BAC10015.1| photosystem II 11 kD protein [Thermosynechococcus elongatus BP-1]
Length = 134
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 145 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 204
L+ +LRE++ P++ N + A++ + D+ + +R ++ S++ ++ A+ SLA
Sbjct: 40 LISSLREAIAL-PENDPNKKAAQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLA 98
Query: 205 SFYSKAGPSAPLPGEVKSEILNDLDTAE 232
YS + P+ PLP ++K+ + + E
Sbjct: 99 GHYS-SYPNRPLPEKLKARLEQEFKQVE 125
>gi|348501984|ref|XP_003438549.1| PREDICTED: hypothetical protein LOC100712247 [Oreochromis
niloticus]
Length = 2910
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 97 PVQAEDMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELV-KTLR--ESL 153
PV D+S +++K + + D N++ SG V K Y REL+ + +R E++
Sbjct: 326 PVLGADLSLTKEQKTK--------VRDANQREGSGPVFNKGYHAQLRELLGENMRAVEAM 377
Query: 154 KEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPS 213
+ D +D RRN D +++I + + + +AGE V +K I + P
Sbjct: 378 EADQEDFNGRRRNRDMDQDTINSLMESVI--REIAGEGELVTTKKVISRVCRLVPSLDPR 435
Query: 214 A 214
+
Sbjct: 436 S 436
>gi|359786471|ref|ZP_09289606.1| membrane-bound serine protease [Halomonas sp. GFAJ-1]
gi|359296321|gb|EHK60574.1| membrane-bound serine protease [Halomonas sp. GFAJ-1]
Length = 453
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 55 LHSRTHVVL----PPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAEDMSNGQDEK 110
L+S T VV+ AAS+ +++ S A +A T P+ + +++G+++
Sbjct: 92 LNSETPVVMYVSPSGARAASAGTYLLYGSHVAAMAPATHLGSATPVQMVGSGVASGEEDT 151
Query: 111 EEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSA 170
+EG D E + G + + L+ A ++ L E RNAD A
Sbjct: 152 DEG---------DAKESEREGSAMDRKVLEDAVSFIRGLAE----------RHGRNADWA 192
Query: 171 KESIRD 176
+E++RD
Sbjct: 193 EEAVRD 198
>gi|84997029|ref|XP_953236.1| Tpr-related protein family member [Theileria annulata strain
Ankara]
gi|65304232|emb|CAI76611.1| Tpr-related protein family member, putative [Theileria annulata]
Length = 978
Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 102 DMSNGQDEKEEGVVGAIKSLFDPNEKTKSGKVLPKAYLKSARELVKTLRESLKEDPKDIA 161
D S+G +K EG+VGAIK+ D N TK+G+V+ + E+V+ E+L +
Sbjct: 428 DNSSGLAQKAEGLVGAIKTTGDTN-GTKAGEVITQ-----FNEVVQQRYETLANKTE--- 478
Query: 162 NFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVK 221
+++ +A E++++ + + KT+ E + K + + A + PG+V
Sbjct: 479 -YKQKLAAADENVQNVETAYNNLKTLY--EKILNFTKLEKKAGELENAANQLSNNPGKVN 535
Query: 222 SEILN 226
I N
Sbjct: 536 EVITN 540
>gi|427724512|ref|YP_007071789.1| photosystem II protein Psb27 [Leptolyngbya sp. PCC 7376]
gi|427356232|gb|AFY38955.1| photosystem II protein Psb27 [Leptolyngbya sp. PCC 7376]
Length = 137
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 155 EDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSA 214
E P D N A++ + +Y+S +R V+G S+ ++ A+ +LA +YS G +
Sbjct: 54 ELPADAENRGEVQAEARQQMNEYMSRYRRDSKVSGLRSFTTMQTALNALAGYYSSYG-NR 112
Query: 215 PLPGEVKSEI 224
P+ ++K+ +
Sbjct: 113 PISKKLKTRL 122
>gi|322511284|gb|ADX06594.1| hypothetical protein 162286290 [Organic Lake phycodnavirus]
Length = 159
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 135 PKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYV 194
K + K E K + L++D K+ N+RRN +S WR Q+ E +
Sbjct: 26 AKKWAKKREEEAKKWAKKLRKDIKNCDNYRRNVNS-----------WRRQR-----EDWR 69
Query: 195 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAEKFL 235
+ A+RS + Y K V SE +DL+T EK++
Sbjct: 70 RKKNAVRSGSKIYFK-------NNHVYSEFKDDLNTLEKYI 103
>gi|294634298|ref|ZP_06712839.1| protein SufI [Edwardsiella tarda ATCC 23685]
gi|451967347|ref|ZP_21920591.1| SufI protein [Edwardsiella tarda NBRC 105688]
gi|291092291|gb|EFE24852.1| protein SufI [Edwardsiella tarda ATCC 23685]
gi|451313902|dbj|GAC65953.1| SufI protein [Edwardsiella tarda NBRC 105688]
Length = 473
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 28/133 (21%)
Query: 57 SRTHVVLPPVEAASSRRHVISCSSTALVAILTFNCGLAPLPVQAE--------------D 102
SR V L + A++SRR+++ S ++ + GL P P+QAE D
Sbjct: 226 SRGWVRLRLLNASNSRRYLLQLSDGRPFFVIASDQGLLPAPLQAETLPLAPGERREVLID 285
Query: 103 MSNGQD-----EKEEGVVGAIKSLFDPNEKTKSGKVL---PKAYLKSARELVKTLRESLK 154
MS G++ + G++ ++ LF+P+ S +VL P L + TL L
Sbjct: 286 MSKGEEVAITAGEAAGIMDRLRGLFEPSSMLVSTRVLTLRPTGLLPL---MTDTLPTRLG 342
Query: 155 EDP---KDIANFR 164
+P D+ N R
Sbjct: 343 AEPLPEGDVVNNR 355
>gi|220906511|ref|YP_002481822.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7425]
gi|219863122|gb|ACL43461.1| photosystem II protein Psb27 [Cyanothece sp. PCC 7425]
Length = 136
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 145 LVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLA 204
L+ +LR ++ + AD A+ I D+++ +R ++ SY + A+ SLA
Sbjct: 40 LIDSLRTAITLPDDNSGKTAAQAD-ARAKINDFIALYRRDDSLTSLASYTTMRTALNSLA 98
Query: 205 SFYSKAGPSAPLPGEVKSEI 224
+ Y+ + P+ PLP ++K+ +
Sbjct: 99 AHYTSS-PNRPLPQKLKNRL 117
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,443,476,889
Number of Sequences: 23463169
Number of extensions: 130762740
Number of successful extensions: 445166
Number of sequences better than 100.0: 230
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 445000
Number of HSP's gapped (non-prelim): 243
length of query: 235
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 97
effective length of database: 9,121,278,045
effective search space: 884763970365
effective search space used: 884763970365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)