Query 026691
Match_columns 235
No_of_seqs 94 out of 96
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 19:44:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026691.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026691hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k78a1 a.4.1.5 (A:19-81) Pax- 77.1 0.15 1.1E-05 35.1 -1.0 26 200-228 2-27 (63)
2 d1texa_ c.37.1.5 (A:) Stf0 sul 68.0 1.3 9.3E-05 31.6 2.3 55 136-191 210-264 (265)
3 d2acva1 c.87.1.10 (A:3-463) Tr 63.0 7.9 0.00057 30.3 6.3 52 142-205 410-461 (461)
4 d1hcia1 a.7.1.1 (A:272-396) al 47.4 1.6 0.00012 32.1 -0.3 82 134-218 11-92 (125)
5 d2vcha1 c.87.1.10 (A:6-476) Hy 41.6 10 0.00076 29.7 3.7 12 143-154 412-423 (471)
6 d2pq6a1 c.87.1.10 (A:8-480) (I 40.8 13 0.00094 29.0 4.1 51 143-203 420-470 (473)
7 d2gmfa_ a.26.1.2 (A:) Granuloc 35.6 6.9 0.0005 29.7 1.6 25 191-215 65-89 (121)
8 d1i5na_ a.24.10.3 (A:) Chemota 34.2 66 0.0048 22.1 11.5 96 136-231 7-123 (128)
9 d1mtyb_ a.25.1.2 (B:) Methane 31.4 64 0.0046 27.8 7.6 65 137-220 282-346 (384)
10 d3d19a1 a.29.13.1 (A:11-144) U 29.7 68 0.0049 23.6 6.6 52 116-176 29-85 (134)
11 d1qx2a_ a.39.1.1 (A:) Calbindi 29.3 35 0.0025 21.7 4.2 36 171-206 4-39 (76)
12 d2j0na1 a.250.1.1 (A:144-314) 29.0 39 0.0028 26.3 5.2 70 137-229 19-88 (171)
13 d2liga_ a.24.2.1 (A:) Aspartat 27.2 75 0.0054 23.9 6.5 45 165-209 64-119 (157)
14 d1bhga3 c.1.8.3 (A:329-632) be 27.1 57 0.0041 24.3 5.8 51 166-216 94-151 (304)
15 d2gfna2 a.121.1.1 (A:81-199) P 26.5 4.8 0.00035 30.2 -0.8 18 166-183 37-54 (119)
16 d1zboa1 b.122.1.10 (A:2-198) H 25.1 81 0.0059 22.1 6.1 66 159-232 119-186 (197)
17 d1yvia1 a.24.10.2 (A:2-143) Hi 24.8 78 0.0057 22.5 6.0 42 133-174 44-85 (142)
18 d1f44a1 a.60.9.1 (A:20-129) Cr 24.2 82 0.006 21.3 5.8 77 137-228 25-101 (110)
19 d1w3ia_ c.1.10.1 (A:) 2-keto-3 23.2 1.5E+02 0.011 22.7 8.0 41 192-233 240-283 (293)
20 d1tp6a_ d.17.4.12 (A:) Hypothe 23.0 9.2 0.00067 28.4 0.3 37 112-154 24-62 (126)
21 d1hl2a_ c.1.10.1 (A:) N-acetyl 21.7 1.6E+02 0.012 22.5 8.1 40 193-233 250-292 (295)
22 d1u00a1 a.8.4.1 (A:504-615) Ch 21.1 1.2E+02 0.0087 20.9 6.2 47 131-179 48-94 (112)
23 d1n7oa1 a.102.3.2 (A:170-540) 20.8 2.2E+02 0.016 23.6 11.8 87 143-229 6-105 (371)
24 d2bepa1 d.20.1.1 (A:1-154) Ubi 20.2 74 0.0054 23.0 5.1 65 119-183 77-154 (154)
No 1
>d1k78a1 a.4.1.5 (A:19-81) Pax-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.07 E-value=0.15 Score=35.12 Aligned_cols=26 Identities=27% Similarity=0.579 Sum_probs=21.9
Q ss_pred HHHHHhhHhhcCCCCCCChhHHHHHHHHH
Q 026691 200 IRSLASFYSKAGPSAPLPGEVKSEILNDL 228 (235)
Q Consensus 200 LNsLAGHYsSfGp~rPLPeklK~RLLqEL 228 (235)
+|.|+|-|.+ | +|||-++|+||.+-.
T Consensus 2 ~n~~gg~~~~-G--rPls~DLR~Riv~~~ 27 (63)
T d1k78a1 2 VNQLGGVFVN-G--RPLPDVVRQRIVELA 27 (63)
T ss_dssp BCTTSCBCCT-T--SCCCHHHHHHHHHHH
T ss_pred cCCCCccccC-C--CcCCHHHHHHHHHHH
Confidence 4678888888 5 999999999999654
No 2
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium smegmatis [TaxId: 1772]}
Probab=68.00 E-value=1.3 Score=31.65 Aligned_cols=55 Identities=18% Similarity=0.235 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHHhhhCCCCCCCch
Q 026691 136 KAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEE 191 (235)
Q Consensus 136 kdY~kdT~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~V~G~~ 191 (235)
.|.++|-.++++.|-+-|.+|+... .............++|..+||.+..-.|.+
T Consensus 210 EdL~~dP~~~~~~I~~fLgl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (265)
T d1texa_ 210 PYLWRNLTEVVGTVLEALGQDPRLA-PKPVLERQADQRSDEWVERYRRDAQRDGLP 264 (265)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCTTCC---------------CCSTTTC-C-CCSCCC
T ss_pred HHHHhCHHHHHHHHHHHhCcCcccc-cchhhhhhcccchHHHHHHHHHHHHHcCCC
Confidence 4566777889999999999965443 223333445556668999999887776653
No 3
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=62.96 E-value=7.9 Score=30.31 Aligned_cols=52 Identities=23% Similarity=0.351 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHHhhhCCCCCCCchhHHHHHHHHHHHHh
Q 026691 142 ARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLAS 205 (235)
Q Consensus 142 T~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~V~G~~SFttM~TALNsLAG 205 (235)
+.+|.+.|++.|+. ++..++.+.+.++.++ +-...|-.|++.+.+.|++|.|
T Consensus 410 ~~~l~~a~~~vl~~----d~~~r~~a~~l~~~~r--------~a~~~gg~s~~~~~~~~~~~~~ 461 (461)
T d2acva1 410 AEEIEKGLKDLMDK----DSIVHKKVQEMKEMSR--------NAVVDGGSSLISVGKLIDDITG 461 (461)
T ss_dssp HHHHHHHHHHHTCT----TCTHHHHHHHHHHHHH--------HHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC----CHHHHHHHHHHHHHHH--------HHhcCCCchHHHHHHHHHHhcC
Confidence 46778888888863 2234444555555433 1244588999999999999976
No 4
>d1hcia1 a.7.1.1 (A:272-396) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.41 E-value=1.6 Score=32.13 Aligned_cols=82 Identities=16% Similarity=0.268 Sum_probs=55.8
Q ss_pred CchHHHHHHHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHHhhhCCCCCCCchhHHHHHHHHHHHHhhHhhcCCC
Q 026691 134 LPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPS 213 (235)
Q Consensus 134 LPkdY~kdT~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~V~G~~SFttM~TALNsLAGHYsSfGp~ 213 (235)
|-.+|.+.|.++.+-++.+++. -.|. .+......+|+++.+|. +||+...-....-...+..-++.|-....+++-.
T Consensus 11 l~~eY~~~As~Ll~Wi~~~~~~-L~dr-~f~~t~~~iq~~l~~f~-~yr~~ekp~~~~Ek~~l~~l~~~lqt~~~~~n~~ 87 (125)
T d1hcia1 11 LMEEYERLASELLEWIRRTIPW-LENR-TPEKTMQAMQKKLEDFR-DYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRP 87 (125)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHH-TTCC-CCCSSSTTTTHHHHHHH-HHHHHTHHHHHHHHHHTTTHHHHTTTTTTTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCC-CCCCCHHHHHHHHHHHH-HHhcccCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4468999999999999999985 2222 23335567888999987 4655433334445556666777777778887655
Q ss_pred CCCCh
Q 026691 214 APLPG 218 (235)
Q Consensus 214 rPLPe 218 (235)
.++|+
T Consensus 88 ~~~P~ 92 (125)
T d1hcia1 88 AFMPS 92 (125)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 55665
No 5
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=41.61 E-value=10 Score=29.66 Aligned_cols=12 Identities=8% Similarity=0.396 Sum_probs=7.5
Q ss_pred HHHHHHHHHHhc
Q 026691 143 RELVKTLRESLK 154 (235)
Q Consensus 143 ~~VV~tLReaLe 154 (235)
.+|.+.|++.++
T Consensus 412 ~~l~~ai~~vl~ 423 (471)
T d2vcha1 412 EEVARVVKGLME 423 (471)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 356666666665
No 6
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=40.76 E-value=13 Score=29.02 Aligned_cols=51 Identities=27% Similarity=0.403 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHHhhhCCCCCCCchhHHHHHHHHHHH
Q 026691 143 RELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSL 203 (235)
Q Consensus 143 ~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~V~G~~SFttM~TALNsL 203 (235)
.++.+.|++.|+ ||+ ..+.++.+.+.++.++ .....|-.|++.+...|++|
T Consensus 420 ~~l~~ai~~vl~-d~~-~~~~r~~a~~l~~~~~--------~a~~~gg~s~~~~~~~i~~~ 470 (473)
T d2pq6a1 420 EELAKLINEVIA-GDK-GKKMKQKAMELKKKAE--------ENTRPGGCSYMNLNKVIKDV 470 (473)
T ss_dssp HHHHHHHHHHHT-SHH-HHHHHHHHHHHHHHHH--------HHTSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc-CCh-HHHHHHHHHHHHHHHH--------HHHhCCCCHHHHHHHHHHHH
Confidence 468888888887 232 1234454445554443 12334678999999888875
No 7
>d2gmfa_ a.26.1.2 (A:) Granulocyte-macrophage colony-stimulating factor (GM-CSF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.60 E-value=6.9 Score=29.68 Aligned_cols=25 Identities=28% Similarity=0.511 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHHHhhHhhcCCCCC
Q 026691 191 ESYVELEKAIRSLASFYSKAGPSAP 215 (235)
Q Consensus 191 ~SFttM~TALNsLAGHYsSfGp~rP 215 (235)
-|++.+..+|.-+|.||..+-|..|
T Consensus 65 Gslt~L~g~LtmmA~hYk~~CPpTp 89 (121)
T d2gmfa_ 65 GSLTKLKGPLTMMASHYKQHCPPTP 89 (121)
T ss_dssp GGGGGGHHHHHHHHHHHHHHSCCCC
T ss_pred ccHHHhccHHHHHHHHHHhcCCCCC
Confidence 4789999999999999999977655
No 8
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=34.15 E-value=66 Score=22.07 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHHHHHhc---CCCCCch---HHHHhHHHHH---------------HHHHHHHHhhhCCCCCCCchhHH
Q 026691 136 KAYLKSARELVKTLRESLK---EDPKDIA---NFRRNADSAK---------------ESIRDYLSNWRGQKTVAGEESYV 194 (235)
Q Consensus 136 kdY~kdT~~VV~tLReaLe---lDp~D~~---~~~~aa~~AK---------------e~InDyVSrYRr~~~V~G~~SFt 194 (235)
..|++.+.+.++.|...|. -+|.|.+ ...++.-+.| ..+-+++.+.|..+......-..
T Consensus 7 ~~F~~Ea~e~l~~l~~~l~~le~~~~~~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l~~lr~~~~~~~~~~~~ 86 (128)
T d1i5na_ 7 QTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLMENLLDEARRGEMQLNTDIIN 86 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTSCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhhHHhhcChHHHHHHHHHHHHHHHHHHhCCCCCCHHHHH
Confidence 4577888888888888763 2444443 2233333333 34567888898877676777788
Q ss_pred HHHHHHHHHHhhHhhcCCCCCCChhHHHHHHHHHHHH
Q 026691 195 ELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTA 231 (235)
Q Consensus 195 tM~TALNsLAGHYsSfGp~rPLPeklK~RLLqEL~~A 231 (235)
.+..+++.|...-...-...+.++..-+.|.+.|.+.
T Consensus 87 ~l~~~~d~l~~~l~~~~~~~~~~~~~~~~l~~~L~~l 123 (128)
T d1i5na_ 87 LFLETKDIMQEQLDAYKNSEEPDAASFEYICNALRQL 123 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHH
Confidence 8888888777765443222333334444555665543
No 9
>d1mtyb_ a.25.1.2 (B:) Methane monooxygenase hydrolase beta subunit {Methylococcus capsulatus [TaxId: 414]}
Probab=31.36 E-value=64 Score=27.82 Aligned_cols=65 Identities=17% Similarity=0.355 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHHhhhCCCCCCCchhHHHHHHHHHHHHhhHhhcCCCCCC
Q 026691 137 AYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216 (235)
Q Consensus 137 dY~kdT~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~V~G~~SFttM~TALNsLAGHYsSfGp~rPL 216 (235)
+|.+.-+-+...++..|+.||.- .+.=|..|+.|+.+|+. .-..|+++|.+=|+.+ |..+-
T Consensus 282 D~~Rh~~~~~alvk~~l~~dpe~-------~~~Nr~llq~Wi~~W~~-----------~a~~Al~~~~pi~s~~-p~~~~ 342 (384)
T d1mtyb_ 282 YFQIAKQGVQDLYYNCLGDDPEF-------SDYNRTVMRNWTGKWLE-----------PTIAALRDFMGLFAKL-PAGTT 342 (384)
T ss_dssp HHHHHHHHHHHHHCCCCCTCTTT-------HHHHHHHHHHHHHHHHH-----------HHHHHHHHHGGGGGGS-CTTSC
T ss_pred HHHHHHHHHHHHHHHHHhcCccc-------chhHHHHHHHHHHHHHH-----------HHHHHHHHHhHHhhhc-CCCCC
Confidence 45444444455555677765432 12457899999999976 3568999999999996 65554
Q ss_pred ChhH
Q 026691 217 PGEV 220 (235)
Q Consensus 217 Pekl 220 (235)
+.+-
T Consensus 343 ~~~~ 346 (384)
T d1mtyb_ 343 DKEE 346 (384)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 4433
No 10
>d3d19a1 a.29.13.1 (A:11-144) Uncharacterized protein BCE_G9241_1042 {Bacillus cereus [TaxId: 1396]}
Probab=29.74 E-value=68 Score=23.58 Aligned_cols=52 Identities=8% Similarity=0.103 Sum_probs=30.6
Q ss_pred cchhcccCCCCcccCCCCCchHHHHHHHHHH----HHHHHHhcC-CCCCchHHHHhHHHHHHHHHH
Q 026691 116 GAIKSLFDPNEKTKSGKVLPKAYLKSARELV----KTLRESLKE-DPKDIANFRRNADSAKESIRD 176 (235)
Q Consensus 116 ~~~~~~fdp~~~tkSg~~LPkdY~kdT~~VV----~tLReaLel-Dp~D~~~~~~aa~~AKe~InD 176 (235)
.-|...|||.|+ ++.+.+.+-. +-+.++.++ ++.|.+..++.-+.+..++..
T Consensus 29 ~FI~~~l~p~E~---------~li~~A~~F~~~Fd~Ll~~a~~~~~~~~~~~l~~ln~~~~~~~~~ 85 (134)
T d3d19a1 29 FFLRLGFRCEDT---------QLIEEANQFYRLFEHIEQIAHSYTNETDPEQIKRFNAEVQQAATN 85 (134)
T ss_dssp HHHHHTSCTTCH---------HHHHHHHHHHHHHHHHHHHHTTCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCcccH---------HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence 456677787763 5777777765 334556665 345666665555554444433
No 11
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.31 E-value=35 Score=21.66 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhhCCCCCCCchhHHHHHHHHHHHHhh
Q 026691 171 KESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASF 206 (235)
Q Consensus 171 Ke~InDyVSrYRr~~~V~G~~SFttM~TALNsLAGH 206 (235)
++.+++.-..|.++..-+|.-|..++..+|++|+..
T Consensus 4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~ 39 (76)
T d1qx2a_ 4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPS 39 (76)
T ss_dssp HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCc
Confidence 456677777775554346999999999999998643
No 12
>d2j0na1 a.250.1.1 (A:144-314) Invasin IpaD {Shigella flexneri [TaxId: 623]}
Probab=29.02 E-value=39 Score=26.30 Aligned_cols=70 Identities=10% Similarity=0.189 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHHhhhCCCCCCCchhHHHHHHHHHHHHhhHhhcCCCCCC
Q 026691 137 AYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216 (235)
Q Consensus 137 dY~kdT~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~V~G~~SFttM~TALNsLAGHYsSfGp~rPL 216 (235)
+|+++..+++.+|-..|..--+|....-=-....+..+.+++.+|-+.+- |-++.+.
T Consensus 19 ~y~Q~~~~~lskls~~i~~~GkDGn~Ikfd~~~~~~~l~~~~~ky~~~~l-----------------------~~~~~~~ 75 (171)
T d2j0na1 19 QMYQDFSAVLSSLAGWISPGGNDGNSVKLQVNSLKKALEELKEKYKDKPL-----------------------YPANNTV 75 (171)
T ss_dssp HHHHHHHHHHHHHGGGEEECCSSSSEEEEEHHHHHHHHHHHHHHHTTCCS-----------------------BCSSSCB
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCeeeecHHHHHHHHHHHHHHccCCcc-----------------------CCCCCcc
Confidence 58888888888888888742233321211234677778888888843211 1125567
Q ss_pred ChhHHHHHHHHHH
Q 026691 217 PGEVKSEILNDLD 229 (235)
Q Consensus 217 PeklK~RLLqEL~ 229 (235)
+++..++-++||.
T Consensus 76 s~ee~~~W~k~L~ 88 (171)
T d2j0na1 76 SQEQANKWLTELG 88 (171)
T ss_dssp CHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhC
Confidence 7877777777764
No 13
>d2liga_ a.24.2.1 (A:) Aspartate receptor, ligand-binding domain {Salmonella typhimurium [TaxId: 90371]}
Probab=27.17 E-value=75 Score=23.90 Aligned_cols=45 Identities=18% Similarity=0.333 Sum_probs=30.6
Q ss_pred HhHHHHHHHHHH---HHHhhhCCCCCCCc--------hhHHHHHHHHHHHHhhHhh
Q 026691 165 RNADSAKESIRD---YLSNWRGQKTVAGE--------ESYVELEKAIRSLASFYSK 209 (235)
Q Consensus 165 ~aa~~AKe~InD---yVSrYRr~~~V~G~--------~SFttM~TALNsLAGHYsS 209 (235)
+....||+.+.. +-..|..-+...|. .||..++.||.+|+.|-.+
T Consensus 64 ~Ll~~A~~~L~~A~~~f~~f~~~~~~~~~~~~~~~l~~sY~~~~~aL~el~~~L~~ 119 (157)
T d2liga_ 64 DLLQNAKTTLAQAAAHYANFKNMTPLPAMAEASANVDEKYQRYQAALAELIQFLDN 119 (157)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 345556555543 55666655555443 7899999999999997754
No 14
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.12 E-value=57 Score=24.31 Aligned_cols=51 Identities=8% Similarity=0.119 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCC-------chhHHHHHHHHHHHHhhHhhcCCCCCC
Q 026691 166 NADSAKESIRDYLSNWRGQKTVAG-------EESYVELEKAIRSLASFYSKAGPSAPL 216 (235)
Q Consensus 166 aa~~AKe~InDyVSrYRr~~~V~G-------~~SFttM~TALNsLAGHYsSfGp~rPL 216 (235)
..+..++.+++.|.++|+.|++-. ..........++.+...-.+.-|+||+
T Consensus 94 ~~~~~~~~~~~~i~~~rnhPsI~~w~~~NE~~~~~~~~~~~~~~~~~~ik~~Dptrpv 151 (304)
T d1bhga3 94 SLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLDPSRPV 151 (304)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEEEEEEEESCCTTSHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHhccCCCCCcccchhhhhhHHHHHHHHhhCCCCce
Confidence 345677777778888887777510 111111223344555555566666664
No 15
>d2gfna2 a.121.1.1 (A:81-199) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=26.51 E-value=4.8 Score=30.16 Aligned_cols=18 Identities=33% Similarity=0.879 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHhhhC
Q 026691 166 NADSAKESIRDYLSNWRG 183 (235)
Q Consensus 166 aa~~AKe~InDyVSrYRr 183 (235)
+.+.||.+|-.|++||||
T Consensus 37 ~ee~ar~eia~flarwr~ 54 (119)
T d2gfna2 37 AEETARGEIAAFLARWRG 54 (119)
T ss_dssp ---CCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 356789999999999996
No 16
>d1zboa1 b.122.1.10 (A:2-198) Hypothetical protein BPP1347 {Bordetella parapertussis [TaxId: 519]}
Probab=25.13 E-value=81 Score=22.14 Aligned_cols=66 Identities=15% Similarity=0.090 Sum_probs=37.2
Q ss_pred CchHHHHhHHHHHHHHHHHHHhhhCCCC--CCCchhHHHHHHHHHHHHhhHhhcCCCCCCChhHHHHHHHHHHHHH
Q 026691 159 DIANFRRNADSAKESIRDYLSNWRGQKT--VAGEESYVELEKAIRSLASFYSKAGPSAPLPGEVKSEILNDLDTAE 232 (235)
Q Consensus 159 D~~~~~~aa~~AKe~InDyVSrYRr~~~--V~G~~SFttM~TALNsLAGHYsSfGp~rPLPeklK~RLLqEL~~AE 232 (235)
+.++.....+..++.++.|.......+. ......+.+.. .|+.+-.+ .-|+|.+.|.+||+ .+..|
T Consensus 119 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~la~---~l~l~~~~kQ~lLE-~~~~~ 186 (197)
T d1zboa1 119 VPPELARSASALGRLIARLQREGVPPHIMPMAAPFRLDDCG----WVADRWAE---MLSLPPADKARLLL-LPPLD 186 (197)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHTTCCTTTCSBCSCCCTTCHH----HHHHHHHH---HSCCCHHHHHHHHH-SCHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhhhccCCHH----HHHHHHHH---hCCCCHHHHHHHHC-CCHHH
Confidence 3445556666777777777665443322 12222333332 34444444 36899999999994 45544
No 17
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=24.75 E-value=78 Score=22.50 Aligned_cols=42 Identities=10% Similarity=0.139 Sum_probs=34.1
Q ss_pred CCchHHHHHHHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHH
Q 026691 133 VLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESI 174 (235)
Q Consensus 133 ~LPkdY~kdT~~VV~tLReaLelDp~D~~~~~~aa~~AKe~I 174 (235)
.+-..|.+++.+.+..|+++++..++|.+..++.+-..|-+.
T Consensus 44 eli~~Fl~~~~~~l~~l~~al~~~~~D~~~~~~~aH~LKGss 85 (142)
T d1yvia1 44 EVVTLFCDDADRIINEIATLLEQPVVNFDKVDAYVHQLKGSS 85 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhHH
Confidence 366789999999999999999976678778777777766544
No 18
>d1f44a1 a.60.9.1 (A:20-129) Cre recombinase {Bacteriophage P1 [TaxId: 10678]}
Probab=24.18 E-value=82 Score=21.32 Aligned_cols=77 Identities=14% Similarity=0.208 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHHhhhCCCCCCCchhHHHHHHHHHHHHhhHhhcCCCCCC
Q 026691 137 AYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLSNWRGQKTVAGEESYVELEKAIRSLASFYSKAGPSAPL 216 (235)
Q Consensus 137 dY~kdT~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~V~G~~SFttM~TALNsLAGHYsSfGp~rPL 216 (235)
.|..|-..-.+-+.+. ..+|-+ .-.+.|.+|+..-+.. --|.+|+..-|-+|..||.-.|-..|.
T Consensus 25 aY~~dl~~f~~w~~~~-~~~~l~---------~~~~~v~~yl~~l~~~-----g~s~sTi~R~lsair~f~r~~g~~~p~ 89 (110)
T d1f44a1 25 MLLSVCRSWAAWCKLN-NRKWFP---------AEPEDVRDYLLYLQAR-----GLAVKTIQQHLGQLNMLHRRSGLPRPS 89 (110)
T ss_dssp HHHHHHHHHHHHHHHT-TCCTTT---------TCHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHHHHHHTTCCCGG
T ss_pred HHHHHHHHHHHHHhhh-cccccc---------hhhhHHHHHHHHHHhc-----CCCccHHHHHHHHHHHHHHHcCCCCCc
Confidence 4666666555554322 222322 1234688898876543 246789999999999999988755554
Q ss_pred ChhHHHHHHHHH
Q 026691 217 PGEVKSEILNDL 228 (235)
Q Consensus 217 PeklK~RLLqEL 228 (235)
..+.-..+++-+
T Consensus 90 ~~~~V~~~l~~i 101 (110)
T d1f44a1 90 DSNAVSLVMRRI 101 (110)
T ss_dssp GSHHHHHHHHHH
T ss_pred CCHHHHHHHHHc
Confidence 333333444443
No 19
>d1w3ia_ c.1.10.1 (A:) 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.24 E-value=1.5e+02 Score=22.71 Aligned_cols=41 Identities=12% Similarity=0.228 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHhhHhhcCCCC---CCChhHHHHHHHHHHHHHh
Q 026691 192 SYVELEKAIRSLASFYSKAGPSA---PLPGEVKSEILNDLDTAEK 233 (235)
Q Consensus 192 SFttM~TALNsLAGHYsSfGp~r---PLPeklK~RLLqEL~~AEk 233 (235)
.+...+.+...+.|+ ..-.++. ||+++.+++|.+.+++.+.
T Consensus 240 ~~~~~~~~~~~l~G~-~~g~~R~Pl~~l~~e~~~~l~~~l~~i~~ 283 (293)
T d1w3ia_ 240 SLSSNYVLTKYFQGY-DLGYPRPPIFPLDDEEERQLIKKVEGIRA 283 (293)
T ss_dssp HHHHHHHHHHHHHSS-CCBCCCTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhcCC-CCCCcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 455677777778884 4422444 5678999998888887654
No 20
>d1tp6a_ d.17.4.12 (A:) Hypothetical protein PA1314 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.01 E-value=9.2 Score=28.41 Aligned_cols=37 Identities=24% Similarity=0.259 Sum_probs=26.6
Q ss_pred cccccchhcccCCCCc--ccCCCCCchHHHHHHHHHHHHHHHHhc
Q 026691 112 EGVVGAIKSLFDPNEK--TKSGKVLPKAYLKSARELVKTLRESLK 154 (235)
Q Consensus 112 ~g~~~~~~~~fdp~~~--tkSg~~LPkdY~kdT~~VV~tLReaLe 154 (235)
++.+.++++.|||+.+ |++|..|+.+ +|++.++..-.
T Consensus 24 ~~~l~~L~a~f~p~FsMV~~~G~~l~~~------~~~~~f~~~~G 62 (126)
T d1tp6a_ 24 ADALDALMARFAEDFSMVTPHGVVLDKT------ALGELFRSKGG 62 (126)
T ss_dssp TTHHHHHHTTEEEEEEEECTTSCEEEHH------HHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCcEEECCCCeEcCHH------HHHHHHHHhcC
Confidence 3679999999999987 6788777654 35555555443
No 21
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=21.70 E-value=1.6e+02 Score=22.49 Aligned_cols=40 Identities=13% Similarity=0.175 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhHhhc---CCCCCCChhHHHHHHHHHHHHHh
Q 026691 193 YVELEKAIRSLASFYSKA---GPSAPLPGEVKSEILNDLDTAEK 233 (235)
Q Consensus 193 FttM~TALNsLAGHYsSf---Gp~rPLPeklK~RLLqEL~~AEk 233 (235)
+..+..+++.+ |.+.+. -|-.||+++.+++|.+-+++..+
T Consensus 250 ~~~~K~~l~~~-G~~~~~~~R~P~~~l~~~~~~~l~~~l~~l~~ 292 (295)
T d1hl2a_ 250 FRGLKTVLHYM-DVVSVPLCRKPFGPVDEKYLPELKALAQQLMQ 292 (295)
T ss_dssp HHHHHHHHHHT-TSCSSCCCCTTSCCCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 45566666554 555542 24445789999888877776654
No 22
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66) {Escherichia coli [TaxId: 562]}
Probab=21.06 E-value=1.2e+02 Score=20.87 Aligned_cols=47 Identities=13% Similarity=0.237 Sum_probs=30.4
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhcCCCCCchHHHHhHHHHHHHHHHHHH
Q 026691 131 GKVLPKAYLKSARELVKTLRESLKEDPKDIANFRRNADSAKESIRDYLS 179 (235)
Q Consensus 131 g~~LPkdY~kdT~~VV~tLReaLelDp~D~~~~~~aa~~AKe~InDyVS 179 (235)
|..|+.+-.+.-...++.|+.+|+- .|........+...+....|.+
T Consensus 48 ~~~L~~~e~~~i~~~i~~l~~~l~~--~d~~~I~~~~~~L~~~~~~~a~ 94 (112)
T d1u00a1 48 AALLSAAERQVIDDAAAHLSEVAQG--DDVDAIEQAIKNVDKQTQDFAA 94 (112)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHTTS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 3467888888888888888888874 3555545545555444444543
No 23
>d1n7oa1 a.102.3.2 (A:170-540) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=20.78 E-value=2.2e+02 Score=23.63 Aligned_cols=87 Identities=7% Similarity=0.060 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhc---CCCCCchHHHHhHHHHHHHHHHHHHhhhCCCC----------CCCchhHHHHHHHHHHHHhhHhh
Q 026691 143 RELVKTLRESLK---EDPKDIANFRRNADSAKESIRDYLSNWRGQKT----------VAGEESYVELEKAIRSLASFYSK 209 (235)
Q Consensus 143 ~~VV~tLReaLe---lDp~D~~~~~~aa~~AKe~InDyVSrYRr~~~----------V~G~~SFttM~TALNsLAGHYsS 209 (235)
.++.++-++.+. .....++...+..+..-+..+.++...+.++. -.....++++.+-|..||--|..
T Consensus 6 ~~lr~~w~~~~~G~~~~~~~d~~~~~~~~~l~~~a~~~~~~~~~~~~~~~lw~dl~~~~~~~~~~~~~~rL~~mA~ay~~ 85 (371)
T d1n7oa1 6 TDRLDDWNGIIAGNQYYDSKNDQMAKLNQELEGKVADSLSSISSQADRIYLWEKFSNYKTSANLTATYRKLEEMAKQVTN 85 (371)
T ss_dssp HHHHHHHHHHHTCGGGCCTTCHHHHHHHHHHHHHHHHHHHHSCCSSSCSSSCGGGCCTTSTHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCcccCCcCCHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHcC
Confidence 556666666554 11223344455555555556666666665443 23345789999999999999998
Q ss_pred cCCCCCCChhHHHHHHHHHH
Q 026691 210 AGPSAPLPGEVKSEILNDLD 229 (235)
Q Consensus 210 fGp~rPLPeklK~RLLqEL~ 229 (235)
=|-..=--+++++.|++=|+
T Consensus 86 pgs~lY~d~~l~~~I~~al~ 105 (371)
T d1n7oa1 86 PSSRYYQDETVVRTVRDSME 105 (371)
T ss_dssp TTSTTTTCHHHHHHHHHHHH
T ss_pred CCCccccCHHHHHHHHHHHH
Confidence 55455567788888877654
No 24
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.19 E-value=74 Score=23.01 Aligned_cols=65 Identities=18% Similarity=0.343 Sum_probs=34.2
Q ss_pred hcccCCCCcccCCCCCchHH----H--HHHHHHHHHHHHHhcC-CCCCchHHH------HhHHHHHHHHHHHHHhhhC
Q 026691 119 KSLFDPNEKTKSGKVLPKAY----L--KSARELVKTLRESLKE-DPKDIANFR------RNADSAKESIRDYLSNWRG 183 (235)
Q Consensus 119 ~~~fdp~~~tkSg~~LPkdY----~--kdT~~VV~tLReaLel-Dp~D~~~~~------~aa~~AKe~InDyVSrYRr 183 (235)
.-+|=||--+.+|..+.+-. - -.-..|+..|+.-+.. ++.|..+.. +--+.-++.+++|+.+|.|
T Consensus 77 t~i~Hpni~~~~g~ic~~~~~~~W~p~~~i~~il~~i~~ll~~p~~~~p~n~eaa~l~~~~~~~f~~~a~~~t~k~A~ 154 (154)
T d2bepa1 77 TKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 154 (154)
T ss_dssp SCCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCCeeCCCCccccccccccCCCcCCHHHHHHHHHHHHcCCCCCCchHHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 34566666665665433211 1 1245677777777764 234433221 1223445778888888854
Done!