Query 026697
Match_columns 235
No_of_seqs 163 out of 1151
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 11:27:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026697.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026697hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00052 prolyl 4-hydroxylase; 100.0 1.3E-56 2.9E-61 388.2 21.8 217 17-234 40-256 (310)
2 KOG1591 Prolyl 4-hydroxylase a 100.0 4.2E-49 9.2E-54 337.4 14.7 203 15-234 81-288 (289)
3 smart00702 P4Hc Prolyl 4-hydro 100.0 2.2E-37 4.8E-42 250.4 17.6 174 31-229 1-178 (178)
4 PRK05467 Fe(II)-dependent oxyg 100.0 2.8E-30 6.1E-35 214.6 13.9 164 33-230 2-178 (226)
5 PHA02813 hypothetical protein; 99.8 1.5E-19 3.3E-24 156.1 11.2 149 44-226 24-178 (354)
6 PHA02869 C4L/C10L-like gene fa 99.8 2.3E-19 5.1E-24 156.9 10.0 137 56-228 45-189 (418)
7 PF13640 2OG-FeII_Oxy_3: 2OG-F 99.7 2.4E-17 5.3E-22 120.7 6.4 91 111-229 1-100 (100)
8 COG3128 PiuC Uncharacterized i 99.7 1.7E-16 3.7E-21 125.6 10.9 164 32-230 3-181 (229)
9 KOG3710 EGL-Nine (EGLN) protei 99.2 4.3E-10 9.3E-15 92.1 12.5 167 32-231 54-240 (280)
10 PF13661 2OG-FeII_Oxy_4: 2OG-F 98.8 1.2E-08 2.6E-13 69.9 4.7 52 108-163 10-65 (70)
11 PF03336 Pox_C4_C10: Poxvirus 98.8 5E-08 1.1E-12 84.7 9.5 124 71-225 37-164 (339)
12 PF03171 2OG-FeII_Oxy: 2OG-Fe( 98.6 3.7E-08 8.1E-13 71.5 3.7 90 109-229 2-97 (98)
13 COG3751 EGL-9 Predicted prolin 98.5 4.1E-07 8.8E-12 76.7 8.7 102 109-232 136-242 (252)
14 TIGR02408 ectoine_ThpD ectoine 98.3 1.1E-05 2.3E-10 69.8 12.1 185 31-227 28-246 (277)
15 PHA02866 Hypothetical protein; 98.2 6.7E-06 1.5E-10 70.2 7.7 131 56-226 32-165 (333)
16 PF09859 Oxygenase-NA: Oxygena 98.0 1.5E-05 3.3E-10 62.5 6.7 103 109-230 62-172 (173)
17 PF05721 PhyH: Phytanoyl-CoA d 98.0 1.9E-05 4.1E-10 63.8 7.2 169 32-219 5-206 (211)
18 PF13759 2OG-FeII_Oxy_5: Putat 97.9 2.8E-05 6.1E-10 56.9 5.9 91 114-224 5-98 (101)
19 KOG3844 Predicted component of 97.9 0.00012 2.5E-09 65.0 10.4 167 29-232 33-219 (476)
20 TIGR01762 chlorin-enz chlorina 97.5 0.004 8.7E-08 54.2 13.7 182 31-228 14-247 (288)
21 TIGR02466 conserved hypothetic 97.4 0.0009 1.9E-08 55.2 8.4 93 112-224 99-194 (201)
22 PF13532 2OG-FeII_Oxy_2: 2OG-F 97.1 0.0045 9.7E-08 50.2 9.2 154 33-219 2-177 (194)
23 PRK15401 alpha-ketoglutarate-d 96.9 0.037 8E-07 46.0 12.7 160 29-219 16-196 (213)
24 PF12851 Tet_JBP: Oxygenase do 96.6 0.0079 1.7E-07 48.3 7.0 78 122-229 87-170 (171)
25 COG3826 Uncharacterized protei 96.3 0.06 1.3E-06 43.3 10.1 103 109-230 124-234 (236)
26 KOG3200 Uncharacterized conser 95.7 0.05 1.1E-06 43.4 7.1 97 26-129 7-108 (224)
27 PHA02923 hypothetical protein; 95.6 0.061 1.3E-06 46.4 7.7 98 87-226 43-142 (315)
28 COG3145 AlkB Alkylated DNA rep 91.6 4.9 0.00011 32.9 11.4 82 90-197 87-170 (194)
29 PF06822 DUF1235: Protein of u 91.3 1.4 3E-05 37.7 8.1 108 87-233 32-140 (266)
30 PLN03001 oxidoreductase, 2OG-F 90.7 2.2 4.8E-05 36.6 9.1 87 110-230 117-213 (262)
31 PLN02984 oxidoreductase, 2OG-F 88.6 4.2 9.1E-05 36.3 9.5 87 110-230 201-298 (341)
32 TIGR00568 alkb DNA alkylation 88.0 3.8 8.2E-05 32.8 8.0 87 87-197 73-159 (169)
33 PLN02216 protein SRG1 87.3 3.5 7.7E-05 37.0 8.3 88 110-230 211-308 (357)
34 PLN02904 oxidoreductase 86.9 5.5 0.00012 35.8 9.3 88 109-230 208-305 (357)
35 PF14033 DUF4246: Protein of u 86.8 3.4 7.3E-05 38.9 8.1 96 123-234 364-482 (501)
36 KOG3959 2-Oxoglutarate- and ir 86.8 0.97 2.1E-05 38.0 4.0 95 30-129 71-174 (306)
37 PLN02639 oxidoreductase, 2OG-F 86.4 6.3 0.00014 35.0 9.4 89 109-230 190-288 (337)
38 PLN02485 oxidoreductase 86.4 6.2 0.00014 34.8 9.3 48 182-230 236-287 (329)
39 PLN02750 oxidoreductase, 2OG-F 86.2 5 0.00011 35.7 8.7 90 109-230 193-292 (345)
40 PLN02947 oxidoreductase 86.0 5.9 0.00013 35.8 9.1 88 109-230 225-322 (374)
41 PLN00417 oxidoreductase, 2OG-F 84.4 6.1 0.00013 35.3 8.3 88 110-230 204-301 (348)
42 PLN02254 gibberellin 3-beta-di 83.2 9.7 0.00021 34.2 9.1 88 110-230 211-308 (358)
43 PLN02515 naringenin,2-oxogluta 82.6 9.5 0.00021 34.2 8.8 89 110-230 196-294 (358)
44 KOG0143 Iron/ascorbate family 81.4 10 0.00022 33.6 8.4 88 110-229 177-274 (322)
45 PLN02299 1-aminocyclopropane-1 81.4 15 0.00032 32.4 9.5 88 110-230 159-256 (321)
46 COG5285 Protein involved in bi 80.4 6.4 0.00014 34.2 6.5 92 121-226 132-226 (299)
47 PLN02758 oxidoreductase, 2OG-F 79.9 18 0.00039 32.5 9.6 87 110-229 212-309 (361)
48 PLN02365 2-oxoglutarate-depend 79.8 11 0.00024 32.9 8.0 47 182-229 198-248 (300)
49 PLN02276 gibberellin 20-oxidas 79.2 19 0.00042 32.3 9.6 88 109-230 206-303 (361)
50 PHA02985 hypothetical protein; 79.1 16 0.00034 31.3 8.3 106 87-232 39-144 (271)
51 PLN02403 aminocyclopropanecarb 78.8 19 0.00042 31.5 9.3 48 182-230 200-252 (303)
52 PLN02912 oxidoreductase, 2OG-F 78.2 15 0.00033 32.8 8.6 88 109-230 197-294 (348)
53 PLN02393 leucoanthocyanidin di 77.1 22 0.00047 32.0 9.3 48 182-230 260-311 (362)
54 KOG4176 Uncharacterized conser 77.0 53 0.0012 29.1 12.9 179 22-233 118-307 (323)
55 PLN02997 flavonol synthase 75.0 11 0.00024 33.3 6.8 87 110-230 184-280 (325)
56 PTZ00273 oxidase reductase; Pr 73.2 46 0.00099 29.2 10.2 47 182-230 225-275 (320)
57 PF02668 TauD: Taurine catabol 73.1 3.5 7.6E-05 34.3 3.0 38 182-227 219-258 (258)
58 KOG4459 Membrane-associated pr 72.5 0.66 1.4E-05 42.5 -1.6 72 139-231 364-435 (471)
59 PLN02156 gibberellin 2-beta-di 70.3 47 0.001 29.5 9.7 88 110-230 179-278 (335)
60 COG3491 PcbC Isopenicillin N s 70.1 33 0.00071 30.3 8.3 89 107-228 172-270 (322)
61 PF10014 2OG-Fe_Oxy_2: 2OG-Fe 70.0 3.3 7.1E-05 33.9 2.1 56 140-218 124-179 (195)
62 PLN03178 leucoanthocyanidin di 66.2 32 0.0007 30.8 7.8 88 110-231 212-309 (360)
63 cd00250 CAS_like Clavaminic ac 65.5 9.9 0.00022 32.1 4.3 41 182-230 218-261 (262)
64 PLN02704 flavonol synthase 64.5 31 0.00066 30.6 7.3 48 182-230 245-296 (335)
65 PLN03002 oxidoreductase, 2OG-F 62.1 60 0.0013 28.7 8.7 91 109-230 182-284 (332)
66 COG4340 Uncharacterized protei 57.6 8.2 0.00018 31.4 2.2 43 154-218 159-201 (226)
67 PF13621 Cupin_8: Cupin-like d 50.8 30 0.00066 28.4 4.7 41 182-231 207-248 (251)
68 KOG1971 Lysyl hydroxylase [Pos 42.3 21 0.00046 32.6 2.5 76 139-231 280-357 (415)
69 PF05118 Asp_Arg_Hydrox: Aspar 41.9 93 0.002 24.4 6.0 78 109-226 80-157 (163)
70 PRK09965 3-phenylpropionate di 41.9 41 0.00088 24.3 3.7 49 144-219 4-52 (106)
71 PRK09553 tauD taurine dioxygen 40.9 20 0.00044 30.7 2.2 34 123-162 95-128 (277)
72 cd03528 Rieske_RO_ferredoxin R 40.0 40 0.00086 23.6 3.3 27 184-219 25-51 (98)
73 TIGR02410 carnitine_TMLD trime 35.9 34 0.00075 30.6 2.9 43 182-233 311-353 (362)
74 PHA02577 2 DNA end protector p 35.9 23 0.0005 28.3 1.5 53 109-164 33-85 (181)
75 cd03530 Rieske_NirD_small_Baci 34.3 52 0.0011 23.1 3.2 24 187-219 29-52 (98)
76 cd03474 Rieske_T4moC Toluene-4 32.6 61 0.0013 23.2 3.3 27 184-219 26-52 (108)
77 TIGR02409 carnitine_bodg gamma 31.2 52 0.0011 29.4 3.3 43 183-233 313-357 (366)
78 PF07350 DUF1479: Protein of u 30.6 28 0.00061 32.0 1.4 39 182-229 317-356 (416)
79 cd04338 Rieske_RO_Alpha_Tic55 29.8 68 0.0015 24.3 3.3 56 140-220 15-70 (134)
80 COG2850 Uncharacterized conser 28.7 71 0.0015 28.9 3.6 47 98-146 108-155 (383)
81 cd03542 Rieske_RO_Alpha_HBDO R 26.8 77 0.0017 23.7 3.1 27 184-219 27-53 (123)
82 cd04337 Rieske_RO_Alpha_Cao Ca 26.1 86 0.0019 23.6 3.2 55 140-219 15-69 (129)
83 PF11191 DUF2782: Protein of u 26.1 1.1E+02 0.0024 22.2 3.7 44 182-227 61-105 (105)
84 cd00250 CAS_like Clavaminic ac 24.4 90 0.002 26.2 3.4 38 119-162 93-130 (262)
85 PRK09553 tauD taurine dioxygen 24.2 1.3E+02 0.0027 25.8 4.3 40 182-229 232-272 (277)
86 TIGR02409 carnitine_bodg gamma 24.1 66 0.0014 28.8 2.6 37 121-163 186-222 (366)
87 PF00355 Rieske: Rieske [2Fe-2 23.5 85 0.0018 21.8 2.7 29 183-220 26-54 (97)
88 cd03467 Rieske Rieske domain; 22.2 1.6E+02 0.0034 20.5 3.9 28 206-233 39-68 (98)
89 cd03535 Rieske_RO_Alpha_NDO Ri 21.6 78 0.0017 23.5 2.2 25 186-219 31-55 (123)
90 PLN00139 hypothetical protein; 21.1 1E+02 0.0023 27.2 3.2 40 118-163 109-148 (320)
91 cd08788 CARD_NOD2_2_CARD15 Cas 20.5 47 0.001 23.1 0.7 15 36-50 25-39 (81)
92 cd05568 PTS_IIB_bgl_like PTS_I 20.3 2.1E+02 0.0045 19.0 4.1 22 32-53 62-83 (85)
No 1
>PLN00052 prolyl 4-hydroxylase; Provisional
Probab=100.00 E-value=1.3e-56 Score=388.16 Aligned_cols=217 Identities=53% Similarity=0.947 Sum_probs=195.8
Q ss_pred CCCCceEEEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCCcceeeEEeCCCCCccccceeeeecccccCCCcHHHHHHHHH
Q 026697 17 EGRAEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKR 96 (235)
Q Consensus 17 ~~~~~~~~e~ls~~P~i~~~~~~Ls~~Ec~~li~~~~~~~~~s~~~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~l~~r 96 (235)
..-.+.|+|+||++|+|++|+||||++||++||+++++.+.++.++++.+|+...+++|+|.++|++..+++++++|++|
T Consensus 40 ~~~~~~kve~lS~~P~i~~~~nfLs~~Ecd~Li~la~~~l~~S~v~~~~~g~~~~s~~RTS~~~~l~~~~dpvv~~I~~R 119 (310)
T PLN00052 40 PPFNASRVKAVSWQPRIFVYKGFLSDAECDHLVKLAKKKIQRSMVADNKSGKSVMSEVRTSSGMFLDKRQDPVVSRIEER 119 (310)
T ss_pred CCcCCceEEEecCCCCEEEECCcCCHHHHHHHHHhcccccccceeecCCCCccccCCCEEecceeecCCCCHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999887766766778899999999987778999999999
Q ss_pred HhhccCCCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCcccc
Q 026697 97 IADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNEL 176 (235)
Q Consensus 97 i~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~ 176 (235)
|++++++|..+.|++||+||++||+|++|+|++.+......+++|++|+|+||||+++||+|+||.+.. ....+.++.+
T Consensus 120 ia~~t~lp~~~~E~lQVlrY~~Gq~Y~~H~D~~~~~~~~~~gg~R~aTvL~YLndv~~GGeT~FP~~~~-~~~~~~~~~~ 198 (310)
T PLN00052 120 IAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKINQALGGHRYATVLMYLSTVDKGGETVFPNAEG-WENQPKDDTF 198 (310)
T ss_pred HHHHhCCCcccCcceEEEecCCCCCCCCCCCccccccccccCCceeEEEEEEeccCCCCCceecCCccc-ccccccccch
Confidence 999999999999999999999999999999998653333457899999999999999999999998742 1223445678
Q ss_pred ccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeecccccc
Q 026697 177 SECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYK 234 (235)
Q Consensus 177 ~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~~~~ 234 (235)
++|.+.+++|+|++|+||+|+|+.++|..|+.++|+||||++|+||++|+|||..+|.
T Consensus 199 s~c~~~gl~VkPkkG~ALlF~nl~~dG~~D~~SlHagcPVi~G~Kw~atkWi~~~~~~ 256 (310)
T PLN00052 199 SECAHKGLAVKPVKGDAVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIHIRSYE 256 (310)
T ss_pred hhhhcCCeEeccCcceEEEEeccCCCCCCCcccccCCCeeecCeEEEEEEeeeccccc
Confidence 8999999999999999999999999999999999999999999999999999998874
No 2
>KOG1591 consensus Prolyl 4-hydroxylase alpha subunit [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-49 Score=337.37 Aligned_cols=203 Identities=56% Similarity=0.967 Sum_probs=183.4
Q ss_pred CCCCCCceEEEEEcCCCCEEEEcCCCCHHHHHHHHHHhCCCcceeeEE-eCCCCCccccceeeeecccccCCCcHHHHHH
Q 026697 15 GDEGRAEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVV-DSDTGKSKDSRVRTSSGTFLARGRDKIIRDI 93 (235)
Q Consensus 15 ~~~~~~~~~~e~ls~~P~i~~~~~~Ls~~Ec~~li~~~~~~~~~s~~~-~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~l 93 (235)
.-+..+|.|+|+||++|++++++||+|++||++|+.++++.+.++++. +..+|......+|+|..+|+....+++++.|
T Consensus 81 ~~~~~ap~k~E~lsw~P~~~~yhd~ls~~e~d~l~~lak~~l~~stv~~~~~~~~~~~~~~R~S~~t~l~~~~~~~~~~i 160 (289)
T KOG1591|consen 81 PFLRLAPVKLEELSWDPRVVLYHDFLSDEECDHLISLAKPKLERSTVVADKGTGHSTTSAVRTSSGTFLPDGASPVVSRI 160 (289)
T ss_pred cceeecchhhhhcccCCceEeehhcCCHHHHHHHHHhhhhhhhceeeeccCCcccccceeeEecceeEecCCCCHHHHHH
Confidence 457889999999999999999999999999999999999999999884 4444655566789999999998778999999
Q ss_pred HHHHhhccCCCCCCCCCcEEEecCCCceeccccccccc--c--ccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCC
Q 026697 94 EKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMD--E--FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISA 169 (235)
Q Consensus 94 ~~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~--~--~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~ 169 (235)
.+||.++++++.+..|.+||++|+.||+|.+|+|.+.+ + .....+++|++|+++||+|+.+||+|+||.++.
T Consensus 161 ~~ri~~~T~l~~e~~E~lqVlnYg~Gg~Y~~H~D~~~~~~~~~~~~~~~g~RiaT~l~yls~v~~GG~TvFP~~~~---- 236 (289)
T KOG1591|consen 161 EQRIADLTGLPVENGESLQVLNYGLGGHYEPHYDYFLPEEDETFNGLNGGNRIATVLMYLSDVEQGGETVFPNLGM---- 236 (289)
T ss_pred HHHHHhccCCCcccCccceEEEecCCccccccccccccccchhhhhcccCCcceeEEEEecccCCCCcccCCCCCC----
Confidence 99999999999999999999999999999999999852 1 223467999999999999999999999998631
Q ss_pred CCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeecccccc
Q 026697 170 VPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEYK 234 (235)
Q Consensus 170 ~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~~~~ 234 (235)
.++|+|++|+||+|+|+.++|..|+++.|++|||..|+||+.++|||...+.
T Consensus 237 -------------~~~V~PkkGdal~wfnl~~~~~~d~~S~H~~CPv~~G~kw~~~~wi~~~~~~ 288 (289)
T KOG1591|consen 237 -------------KPAVKPKKGDALFWFNLHPDGEGDPRSLHGGCPVLVGSKWIATKWIHEKNQE 288 (289)
T ss_pred -------------cccccCCCCCeeEEEEccCCCCCCccccccCCCeeeccceeeeeeeeecccc
Confidence 2499999999999999999999999999999999999999999999998764
No 3
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.
Probab=100.00 E-value=2.2e-37 Score=250.45 Aligned_cols=174 Identities=44% Similarity=0.739 Sum_probs=149.1
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhCCCcceeeEEeCCCCCccccceeeeecccccCCC-cHHHHHHHHHHhhccCCC---CC
Q 026697 31 PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGR-DKIIRDIEKRIADFTFFP---LE 106 (235)
Q Consensus 31 P~i~~~~~~Ls~~Ec~~li~~~~~~~~~s~~~~~~~g~~~~~~~R~s~~~~l~~~~-~~~~~~l~~ri~~~~~~~---~~ 106 (235)
|.|++++||||++||+.||+++++.+.++.+..+..+....+++|++..+|++... +++++.|++|+..+++.+ ..
T Consensus 1 P~i~~~~~~ls~~ec~~li~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~l~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 80 (178)
T smart00702 1 PGVVVFHDFLSPAECQKLLEEAEPLGWRGEVTRGDTNPNHDSKYRQSNGTWLELLKGDLVIERIRQRLADFLGLLRGLPL 80 (178)
T ss_pred CcEEEECCCCCHHHHHHHHHHhhhhcccceeecCCCCccccCCCEeecceecCCCCCCHHHHHHHHHHHHHHCCCchhhc
Confidence 78999999999999999999999887777776544332256789999999998754 789999999999999887 67
Q ss_pred CCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeE
Q 026697 107 NGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSI 186 (235)
Q Consensus 107 ~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V 186 (235)
..+++++.+|.+|++|.+|+|..... ..++|.+|+++||||+++||+|.|+.... ....+|
T Consensus 81 ~~~~~~~~~Y~~g~~~~~H~D~~~~~----~~~~r~~T~~~yLn~~~~GG~~~f~~~~~---------------~~~~~v 141 (178)
T smart00702 81 SAEDAQVARYGPGGHYGPHVDNFEDD----ENGDRIATFLLYLNDVEEGGELVFPGLGL---------------MVCATV 141 (178)
T ss_pred cCcceEEEEECCCCcccCcCCCCCCC----CCCCeEEEEEEEeccCCcCceEEecCCCC---------------ccceEE
Confidence 88999999999999999999987542 12689999999999999999999998531 135699
Q ss_pred ecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeec
Q 026697 187 KPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 229 (235)
Q Consensus 187 ~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~ 229 (235)
+|++|++|+|++. ++.++|++|||.+|+||+++.|+|
T Consensus 142 ~P~~G~~v~f~~~------~~~~~H~v~pv~~G~r~~~~~W~~ 178 (178)
T smart00702 142 KPKKGDLLFFPSG------RGRSLHGVCPVTRGSRWAITGWIR 178 (178)
T ss_pred eCCCCcEEEEeCC------CCCccccCCcceeCCEEEEEEEEC
Confidence 9999999999873 237999999999999999999996
No 4
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional
Probab=99.97 E-value=2.8e-30 Score=214.60 Aligned_cols=164 Identities=24% Similarity=0.320 Sum_probs=124.4
Q ss_pred EEEEcCCCCHHHHHHHHHHhCCC-cceeeEEeCCCCCccccceeeeecccccCCCcHHHHHHHHHHhhcc---------C
Q 026697 33 AFVYHNFLSKEECEYLINLATPH-MRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFT---------F 102 (235)
Q Consensus 33 i~~~~~~Ls~~Ec~~li~~~~~~-~~~s~~~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~l~~ri~~~~---------~ 102 (235)
|++|+|+||++||+++++..++. +..+.. +.....+++|++.++.. ++++++.|+++|.+.. .
T Consensus 2 i~~I~~vLs~eec~~~~~~le~~~~~dg~~----taG~~~~~vKnN~ql~~---d~~~a~~l~~~i~~~L~~~~l~~sa~ 74 (226)
T PRK05467 2 LLHIPDVLSPEEVAQIRELLDAAEWVDGRV----TAGAQAAQVKNNQQLPE---DSPLARELGNLILDALTRNPLFFSAA 74 (226)
T ss_pred eeeecccCCHHHHHHHHHHHHhcCCccCCc----CcCccchhcccccccCC---CCHHHHHHHHHHHHHHhcCchhhhhc
Confidence 68899999999999999998764 322221 22234567888877643 3567777777766543 2
Q ss_pred CCCCCCCCcEEEecCCCceecccccccccccc-ccCCCceEEEEEEEecCCC--CCccccCCCCCCCCCCCCCccccccc
Q 026697 103 FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFN-TKNGGQRMATVLMYLSDVE--EGGETVFPNAQGNISAVPWWNELSEC 179 (235)
Q Consensus 103 ~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~-~~~~~~R~~T~liYLNd~~--~GGeT~Fp~~~~~~~~~~~~~~~~~c 179 (235)
+|.. ..+++|.||.+|++|++|+|+...... .....+|.+|+++||||+. +||||+|+...
T Consensus 75 lp~~-i~~~~f~rY~~G~~y~~H~D~~~~~~~~~~~~~rs~lS~~lyLnd~~~yeGGEl~~~~~~--------------- 138 (226)
T PRK05467 75 LPRK-IHPPLFNRYEGGMSYGFHVDNAVRSLPGTGGRVRTDLSATLFLSDPDDYDGGELVIEDTY--------------- 138 (226)
T ss_pred cccc-cccceEEEECCCCccCccccCCcccCCCCCcceeEEEEEEEEeCCCCCCcCCceEEecCC---------------
Confidence 3333 357899999999999999999764211 1122357899999999874 89999998642
Q ss_pred cCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 180 GKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 180 ~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
....|+|++|++|+|++ .++|+|+||++|.||+++.|++.
T Consensus 139 --g~~~Vkp~aG~~vlfps---------~~lH~v~pVt~G~R~~~~~Wi~S 178 (226)
T PRK05467 139 --GEHRVKLPAGDLVLYPS---------TSLHRVTPVTRGVRVASFFWIQS 178 (226)
T ss_pred --CcEEEecCCCeEEEECC---------CCceeeeeccCccEEEEEecHHH
Confidence 35789999999999986 79999999999999999999874
No 5
>PHA02813 hypothetical protein; Provisional
Probab=99.81 E-value=1.5e-19 Score=156.11 Aligned_cols=149 Identities=17% Similarity=0.225 Sum_probs=109.3
Q ss_pred HHHHHHHHhCCCcceeeEEeCCCC-CccccceeeeecccccCCCcHHHHHHHHHHhhcc-CCC----CCCCCCcEEEecC
Q 026697 44 ECEYLINLATPHMRKSTVVDSDTG-KSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFT-FFP----LENGEGLQVLHYE 117 (235)
Q Consensus 44 Ec~~li~~~~~~~~~s~~~~~~~g-~~~~~~~R~s~~~~l~~~~~~~~~~l~~ri~~~~-~~~----~~~~e~~~v~rY~ 117 (235)
+.-.+|+..+-.+.+|.+.+..+| +...++.|++.++.++.. +.+.++|+..|.+-+ +.+ .+.+|+++++||.
T Consensus 24 ~l~~~i~~~d~~~~~s~i~~~~~~ge~l~~~iRnNkrviid~~-~~L~erIr~~Lp~~l~~~~lv~~V~vnerirfyrY~ 102 (354)
T PHA02813 24 IIMDMIKYKDIIWEESKVFDHEKGGEVINTNERQCKQYIIRGL-DDIFKVIRKKLLLSFEFPQKISDIILDNTITLIKYE 102 (354)
T ss_pred HHHHHHhccccCccccceeccccCceEEccccccceEEEEcCH-HHHHHHHHHhhHHHhcCCccceeEEEcceEEEEEEC
Confidence 333444433334677888775554 456788999999999853 344445544444322 222 4678999999999
Q ss_pred CCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEe
Q 026697 118 AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW 197 (235)
Q Consensus 118 ~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~ 197 (235)
+|++|.+|.|+.... . ...+.+|+|+|||++++||+|.|...+ ...|. .|++|+|.
T Consensus 103 kGq~F~~H~Dg~~~r---~-k~~s~~tLLLYLN~~~~GGeT~f~~~~------------------~tsI~--~g~dlLFd 158 (354)
T PHA02813 103 KGDFFNNHRDFIHFK---S-KNCYCYHLVLYLNNTSKGGNTNIHIKD------------------NTIFS--TKNDVLFD 158 (354)
T ss_pred CCcccCcccCCceee---c-CCceEEEEEEEEeccCCCCceEEEcCC------------------CceEe--ecceEEEe
Confidence 999999999986531 1 123999999999999999999998742 22466 99999995
Q ss_pred ecCCCCCCCCCCcccCCCCCcCeEeEEEe
Q 026697 198 SMKPDASLDPSSLHGGCPVIKGNKWSSTK 226 (235)
Q Consensus 198 n~~~~g~~d~~~~H~g~pV~~G~K~i~~~ 226 (235)
+...|+|.+|.+|.|||+..
T Consensus 159 ---------h~l~Heg~~V~sG~KyVa~~ 178 (354)
T PHA02813 159 ---------KTLNHSSDIITDGEKNIALI 178 (354)
T ss_pred ---------cccccCCcEeccCeEEEEEE
Confidence 59999999999999998754
No 6
>PHA02869 C4L/C10L-like gene family protein; Provisional
Probab=99.80 E-value=2.3e-19 Score=156.93 Aligned_cols=137 Identities=20% Similarity=0.244 Sum_probs=108.5
Q ss_pred cceeeEEeCCCC-CccccceeeeecccccCCCcHHHHHHHHHHhhcc-----CC--CCCCCCCcEEEecCCCceeccccc
Q 026697 56 MRKSTVVDSDTG-KSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFT-----FF--PLENGEGLQVLHYEAGQKYEPHFD 127 (235)
Q Consensus 56 ~~~s~~~~~~~g-~~~~~~~R~s~~~~l~~~~~~~~~~l~~ri~~~~-----~~--~~~~~e~~~v~rY~~G~~f~~H~D 127 (235)
+.+|.+.+..+| +-.....|.|.++.+. +.+.+.|++||+.+. +. ..+.+++++++||.+|++|++|.|
T Consensus 45 ~~~s~i~~~~~g~e~~~~~~~ksKqii~e---~~La~~L~erlr~lLp~~lk~~v~~V~lnerirfyrY~kGq~F~~H~D 121 (418)
T PHA02869 45 CEDSKIFFPEKRTELLSIKDRKSKQIVFE---NSLNDDLLKKLHALIYDELSTVVDSVTVENTVTLIMYEKGDYFARHRD 121 (418)
T ss_pred cccceeeccccCceeEeeccccceeEEec---hHHHHHHHHHHHHhhhHHhhCccceEEEcceEEEEEECCCCccccccc
Confidence 467788876666 3345567889888775 356666777766542 32 456789999999999999999999
Q ss_pred cccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCC
Q 026697 128 YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDP 207 (235)
Q Consensus 128 ~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~ 207 (235)
+... ..+....+|+|+|||++++||+|.|+.. ....|.|+.| |+|. .
T Consensus 122 g~~~----rs~e~s~~tLLLYLNd~~~GGET~f~~~------------------~~~sI~pksg--LLFd---------h 168 (418)
T PHA02869 122 FSTV----FSKNIICVHLLLYLEQPETGGETVIYID------------------NNTSVKLKTD--HLFD---------K 168 (418)
T ss_pred Ccee----cCCCEEEEEEEEEEeccCCCCceEEEeC------------------CCceEecCCC--eEec---------c
Confidence 8653 2356689999999999999999999872 2577999999 8894 5
Q ss_pred CCcccCCCCCcCeEeEEEeee
Q 026697 208 SSLHGGCPVIKGNKWSSTKWI 228 (235)
Q Consensus 208 ~~~H~g~pV~~G~K~i~~~W~ 228 (235)
...|+|.+|.+|.|||++.=+
T Consensus 169 ~l~Heg~~V~sG~KyVartDV 189 (418)
T PHA02869 169 TIEHESITVESGRKCVALFDV 189 (418)
T ss_pred ccccCCcEeecCeEEEEEEEE
Confidence 999999999999999998643
No 7
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=99.70 E-value=2.4e-17 Score=120.74 Aligned_cols=91 Identities=36% Similarity=0.602 Sum_probs=69.8
Q ss_pred cEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCC---CCccccCCCCCCCCCCCCCccccccccCcCeeEe
Q 026697 111 LQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE---EGGETVFPNAQGNISAVPWWNELSECGKTGLSIK 187 (235)
Q Consensus 111 ~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~---~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~ 187 (235)
+++.+|.+|++++||+|... ...+.+|+++|||++. +||+|+|.... ... .....+.
T Consensus 1 ~~~~~y~~G~~~~~H~D~~~-------~~~~~~t~llyL~~~~~~~~GG~l~~~~~~-~~~------------~~~~~~~ 60 (100)
T PF13640_consen 1 MQLNRYPPGGFFGPHTDNSY-------DPHRRVTLLLYLNDPEWEFEGGELEFYPSK-DSD------------DVSREVE 60 (100)
T ss_dssp -EEEEEETTEEEEEEESSSC-------CCSEEEEEEEESS-CS-HCEE--EEETTTS--TS------------STCEEEG
T ss_pred CEEEEECcCCEEeeeECCCC-------CCcceEEEEEEECCCCcccCCCEEEEeccc-cCC------------CcceEEE
Confidence 47999999999999999743 3569999999999877 99999998642 000 0123333
Q ss_pred -----cccccEEEEeecCCCCCCCCCCcccCCCC-CcCeEeEEEeeec
Q 026697 188 -----PKMGDALLFWSMKPDASLDPSSLHGGCPV-IKGNKWSSTKWIR 229 (235)
Q Consensus 188 -----P~~G~alvF~n~~~~g~~d~~~~H~g~pV-~~G~K~i~~~W~~ 229 (235)
|+.|++|+|++ ..++|++.|| ..|.|++++.|++
T Consensus 61 ~~~~~p~~g~~v~F~~--------~~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 61 DFDIVPKPGRLVIFPS--------DNSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp GGSEE-BTTEEEEEES--------CTCEEEEEEE-EESEEEEEEEEEE
T ss_pred eccccCCCCEEEEEeC--------CCCeecCcccCCCCCEEEEEEEEC
Confidence 99999999985 4899999999 8999999999985
No 8
>COG3128 PiuC Uncharacterized iron-regulated protein [Function unknown]
Probab=99.70 E-value=1.7e-16 Score=125.55 Aligned_cols=164 Identities=23% Similarity=0.332 Sum_probs=114.0
Q ss_pred CEEEEcCCCCHHHHHHHHHHhCCCcceeeEEeCC-CCCccccceeeeecccccCCCcHHHHHHHHHHhh-------ccC-
Q 026697 32 RAFVYHNFLSKEECEYLINLATPHMRKSTVVDSD-TGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIAD-------FTF- 102 (235)
Q Consensus 32 ~i~~~~~~Ls~~Ec~~li~~~~~~~~~s~~~~~~-~g~~~~~~~R~s~~~~l~~~~~~~~~~l~~ri~~-------~~~- 102 (235)
..+.|+.+||+++|.++.+..+.. ..+++. +.+.....+|++.++-.+ .++.+.+..-|.+ +++
T Consensus 3 m~lhIp~VLs~a~va~iRa~l~~A----~w~dGrat~g~q~a~vk~n~qlp~~---s~l~~~vg~~il~al~~~plff~a 75 (229)
T COG3128 3 MMLHIPEVLSEAQVARIRAALEQA----EWVDGRATQGPQGAQVKNNLQLPQD---SALARELGNEILQALTAHPLFFAA 75 (229)
T ss_pred eEEechhhCCHHHHHHHHHHHhhc----cccccccccCcchhhhhccccCCcc---cHHHHHHHHHHHHHHHhchhHHHh
Confidence 456799999999999999887642 112211 111233456666554333 2333333322222 122
Q ss_pred -CCCCCCCCcEEEecCCCceeccccccccccccccCCC---ceEEEEEEEecCCC--CCccccCCCCCCCCCCCCCcccc
Q 026697 103 -FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGG---QRMATVLMYLSDVE--EGGETVFPNAQGNISAVPWWNEL 176 (235)
Q Consensus 103 -~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~---~R~~T~liYLNd~~--~GGeT~Fp~~~~~~~~~~~~~~~ 176 (235)
+|. ..++.+|.+|..|++|.+|.|+.....+ +..+ +..+++.+||+|++ +|||++..+.-
T Consensus 76 ALp~-t~~~P~Fn~Y~eg~~f~fHvDgavr~~h-p~~~~~lrtdls~tlfl~DPedYdGGeLVv~dtY------------ 141 (229)
T COG3128 76 ALPR-TCLPPLFNRYQEGDFFGFHVDGAVRSIH-PGSGFRLRTDLSCTLFLSDPEDYDGGELVVNDTY------------ 141 (229)
T ss_pred hccc-ccCCchhhhccCCCcccccccCcccccC-CCCCceeEeeeeeeeecCCccccCCceEEEeccc------------
Confidence 332 4678999999999999999999765321 1222 34567889999986 89999997642
Q ss_pred ccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 177 SECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 177 ~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
....|+-.+|++|+|++ .++|++.||+.|+|+....|++.
T Consensus 142 -----g~h~VklPAGdLVlypS---------tSlH~VtPVTRg~R~asffW~qs 181 (229)
T COG3128 142 -----GNHRVKLPAGDLVLYPS---------TSLHEVTPVTRGERFASFFWIQS 181 (229)
T ss_pred -----cceEEeccCCCEEEccc---------ccceeccccccCceEEEeeehHH
Confidence 46888888999999986 89999999999999999999874
No 9
>KOG3710 consensus EGL-Nine (EGLN) protein [Signal transduction mechanisms]
Probab=99.19 E-value=4.3e-10 Score=92.06 Aligned_cols=167 Identities=25% Similarity=0.375 Sum_probs=109.4
Q ss_pred CEEEEcCCCCHHHHHHHHHHhCC-----CcceeeEEeCCCCCccccceeeeecccccCCCcH------HHHHHHHHHhhc
Q 026697 32 RAFVYHNFLSKEECEYLINLATP-----HMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDK------IIRDIEKRIADF 100 (235)
Q Consensus 32 ~i~~~~~~Ls~~Ec~~li~~~~~-----~~~~s~~~~~~~g~~~~~~~R~s~~~~l~~~~~~------~~~~l~~ri~~~ 100 (235)
.+.+++|||-.+-=..+.+..+. .+.+..++... ....+++|.....|+...+.. +...+..-+...
T Consensus 54 g~~vvd~flg~~~g~~v~~ev~~l~~~G~f~dgql~~~~--~~~~k~iRgd~i~wi~G~e~gc~~i~~L~s~~d~~i~h~ 131 (280)
T KOG3710|consen 54 GICVVDNFLGSETGKFILKEVEALYETGAFRDGQLVSPD--AFHSKDIRGDKITWVGGNEPGCETIMLLPSPIDSVILHC 131 (280)
T ss_pred ceEEEechhhHHHHHHHHHHHHHHHhccCccCceeccCc--CCcchhhccCCceEecCCCCCccceeeecccchhhhhhh
Confidence 56789999998876666665543 23443333322 223457888888998754311 111111111111
Q ss_pred ---cCCCCCCCCCcEEEecCC-CceeccccccccccccccCCCceEEEEEEEecC---CC-CCcccc-CCCCCCCCCCCC
Q 026697 101 ---TFFPLENGEGLQVLHYEA-GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSD---VE-EGGETV-FPNAQGNISAVP 171 (235)
Q Consensus 101 ---~~~~~~~~e~~~v~rY~~-G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd---~~-~GGeT~-Fp~~~~~~~~~~ 171 (235)
.+-.......-.|+.|.. |-.|-.|.|.. .+-.|-+|++.|||. +. .||.+. ||...+
T Consensus 132 ~~r~~~~~~gRtkAMVAcYPGNGtgYVrHVDNP-------~gDGRcITcIYYlNqNWD~kv~Gg~Lri~pe~~~------ 198 (280)
T KOG3710|consen 132 NGRLGSYIIGRTKAMVACYPGNGTGYVRHVDNP-------HGDGRCITCIYYLNQNWDVKVHGGILRIFPEGST------ 198 (280)
T ss_pred ccccccccccceeEEEEEecCCCceeeEeccCC-------CCCceEEEEEEEcccCcceeeccceeEeccCCCC------
Confidence 111111235677999985 66899999964 355699999999994 43 455554 676533
Q ss_pred CccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeeccc
Q 026697 172 WWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 231 (235)
Q Consensus 172 ~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~ 231 (235)
.-..|.|+-+++||||+ |.+..|++.|+.. +||.|+.|+-..
T Consensus 199 ----------~~adieP~fdrLlffwS-------drrnPhev~Pa~~-tryaitvwyfda 240 (280)
T KOG3710|consen 199 ----------TFADIEPKFDRLLFFWS-------DRRNPHEVQPAYA-TRYAITVWYFDA 240 (280)
T ss_pred ----------cccccCcCCCeEEEEEe-------cCCCccccccccc-cceEEEEEEecc
Confidence 35679999999999998 6788999999997 699999998643
No 10
>PF13661 2OG-FeII_Oxy_4: 2OG-Fe(II) oxygenase superfamily
Probab=98.76 E-value=1.2e-08 Score=69.94 Aligned_cols=52 Identities=27% Similarity=0.464 Sum_probs=43.2
Q ss_pred CCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEec----CCCCCccccCCCC
Q 026697 108 GEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLS----DVEEGGETVFPNA 163 (235)
Q Consensus 108 ~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLN----d~~~GGeT~Fp~~ 163 (235)
.+.+++.+|..|++|++|+|..... .+.+|.+|++|||| +..+||++.|...
T Consensus 10 ~~~~~~~~~~~g~~~~~H~D~~~~~----~~~~r~~t~llYLn~~w~~d~~Gg~~~f~~~ 65 (70)
T PF13661_consen 10 RPNFRFYRYRRGDFFGWHVDADPSS----SGKRRFLTLLLYLNEDWDEDFGGGELFFDDD 65 (70)
T ss_pred CcceeEEEcCCCCEeeeeEcCCccc----cccceeEEEEEEecccccCccCCcEEEEeCC
Confidence 5679999999999999999987532 25789999999999 4457888888764
No 11
>PF03336 Pox_C4_C10: Poxvirus C4/C10 protein; InterPro: IPR005004 This is a family of proteins expressed by members of the Poxviridae.
Probab=98.75 E-value=5e-08 Score=84.73 Aligned_cols=124 Identities=22% Similarity=0.291 Sum_probs=88.9
Q ss_pred ccceeeeecccccC-CCcHHHHHHHHHHhhccC---CCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEE
Q 026697 71 DSRVRTSSGTFLAR-GRDKIIRDIEKRIADFTF---FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVL 146 (235)
Q Consensus 71 ~~~~R~s~~~~l~~-~~~~~~~~l~~ri~~~~~---~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~l 146 (235)
+...|.|.++.+.. ..+++.++|...|..-+- ......+.+.+.+|.+|++|..|.|.... ........+++
T Consensus 37 d~~~r~sk~iv~~~~~~~dI~~~ik~~l~~~lk~~v~~V~V~n~iTfikY~kGd~f~~~~d~~~~----~~~n~~~y~Lv 112 (339)
T PF03336_consen 37 DHEFRKSKQIVIEDSLNDDIFSKIKNLLYDELKNVVEDVIVDNTITFIKYEKGDFFDNHRDFIKR----DSKNCLEYHLV 112 (339)
T ss_pred cccccccceEEEeccchHHHHHHHHHHHHHHhhcceeEEEEcceEEEEEEccCcchhhhccccee----ccCCceEEEEE
Confidence 34478888876663 235677777766654321 11234678999999999999999995432 23456889999
Q ss_pred EEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEE
Q 026697 147 MYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSST 225 (235)
Q Consensus 147 iYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~ 225 (235)
+|||.+.+||+|.+.--+. ..-.|. .++-++| |....|+..+|.+|.|+||.
T Consensus 113 LyL~~~~~GGktkiyi~~~----------------~~tvI~--~~~DvLF---------dKsl~h~s~~V~~G~K~VAl 164 (339)
T PF03336_consen 113 LYLNNPENGGKTKIYIDPN----------------DNTVIS--TSEDVLF---------DKSLNHESIIVEEGRKIVAL 164 (339)
T ss_pred EEEeccCCCceEEEEECCC----------------Cceeee--ccccEEE---------eccccccceEeccCeEEEEE
Confidence 9999999999999763211 121243 3677888 46999999999999999864
No 12
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=98.60 E-value=3.7e-08 Score=71.53 Aligned_cols=90 Identities=22% Similarity=0.350 Sum_probs=56.7
Q ss_pred CCcEEEecC---CCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCee
Q 026697 109 EGLQVLHYE---AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLS 185 (235)
Q Consensus 109 e~~~v~rY~---~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~ 185 (235)
+.+++.+|. .+..+.+|+|.. .+.+|++++ .++|++.|.... ..+.
T Consensus 2 ~~~~~~~Y~~~~~~~~~~~H~D~~----------~~~~Til~~----~~~~gL~~~~~~-----------------~~~~ 50 (98)
T PF03171_consen 2 SQLRLNRYPPPENGVGIGPHTDDE----------DGLLTILFQ----DEVGGLQVRDDG-----------------EWVD 50 (98)
T ss_dssp -EEEEEEE-SCCGCEEEEEEEES------------SSEEEEEE----TSTS-EEEEETT-----------------EEEE
T ss_pred CEEEEEECCCcccCCceeCCCcCC----------CCeEEEEec----ccchheeccccc-----------------cccC
Confidence 458999999 889999999963 478999999 667889998642 3577
Q ss_pred EecccccEEEEe-ecCC--CCCCCCCCcccCCCCCcCeEeEEEeeec
Q 026697 186 IKPKMGDALLFW-SMKP--DASLDPSSLHGGCPVIKGNKWSSTKWIR 229 (235)
Q Consensus 186 V~P~~G~alvF~-n~~~--~g~~d~~~~H~g~pV~~G~K~i~~~W~~ 229 (235)
|+|..+.+++.. +... .+.......|+++++..|+|++++.|++
T Consensus 51 v~~~~~~~~v~~G~~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~ 97 (98)
T PF03171_consen 51 VPPPPGGFIVNFGDALEILTNGRYPATLHRVVPPTEGERYSLTFFLR 97 (98)
T ss_dssp ----TTCEEEEEBHHHHHHTTTSS----EEEE--STS-EEEEEEEEE
T ss_pred ccCccceeeeeceeeeecccCCccCCceeeeEcCCCCCEEEEEEEEC
Confidence 788777666654 2100 1234678999999999999999999986
No 13
>COG3751 EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=98.54 E-value=4.1e-07 Score=76.72 Aligned_cols=102 Identities=28% Similarity=0.312 Sum_probs=77.1
Q ss_pred CCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecC---CCCCccc-cCCCCCCCCCCCCCccccccccCcCe
Q 026697 109 EGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSD---VEEGGET-VFPNAQGNISAVPWWNELSECGKTGL 184 (235)
Q Consensus 109 e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd---~~~GGeT-~Fp~~~~~~~~~~~~~~~~~c~~~~~ 184 (235)
-..|+..|.+|.+|..|-|...+ ...|.+|.++|+|. ++-||++ .|+....+... ...-.
T Consensus 136 ve~~~~~y~~G~~l~~H~D~~~~------~~~R~~~yv~y~~r~wkpe~GGeL~l~~s~~~~~~~----------~~~~~ 199 (252)
T COG3751 136 VEGQITVYNPGCFLLKHDDNGRD------KDIRLATYVYYLTREWKPEYGGELRLFHSLQKNNTA----------ADSFK 199 (252)
T ss_pred eeeeeeEecCCceeEeecccCCC------ccceEEEEEeccCCCCCcCCCCceeecccccccccc----------ccccc
Confidence 36899999999999999998752 45799999999997 4689999 67765421000 01356
Q ss_pred eEecccccEEEEeecCCCCCCCCCCcccCCCCC-cCeEeEEEeeecccc
Q 026697 185 SIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI-KGNKWSSTKWIRVNE 232 (235)
Q Consensus 185 ~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~-~G~K~i~~~W~~~~~ 232 (235)
+|.|+-+++++|.+-. ..+.|.+.+|. .+.|..+++|++.+.
T Consensus 200 ti~P~fn~lv~F~s~~------~Hs~h~V~~~~~~~~RlsV~GW~r~~~ 242 (252)
T COG3751 200 TIAPVFNSLVFFKSRP------SHSVHSVEEPYAAADRLSVTGWFRRPG 242 (252)
T ss_pred ccCCCCceEEEEEecC------CccceeccccccccceEEEeeEEecCC
Confidence 8999999999997611 14788887754 458999999998753
No 14
>TIGR02408 ectoine_ThpD ectoine hydroxylase. Both ectoine and hydroxyectoine are compatible solvents that serve as protectants against osmotic and thermal stresses. A number of genomes synthesize ectoine. This enzyme allows conversion of ectoine to hydroxyectoine, which may be more effective for some purposes, and is found in a subset of ectoine-producing organisms.
Probab=98.31 E-value=1.1e-05 Score=69.79 Aligned_cols=185 Identities=14% Similarity=0.141 Sum_probs=93.4
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhCCCcceeeEEeCCCC--CccccceeeeecccccCCCcHHHH------HHHHHHhhccC
Q 026697 31 PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTG--KSKDSRVRTSSGTFLARGRDKIIR------DIEKRIADFTF 102 (235)
Q Consensus 31 P~i~~~~~~Ls~~Ec~~li~~~~~~~~~s~~~~~~~g--~~~~~~~R~s~~~~l~~~~~~~~~------~l~~ri~~~~~ 102 (235)
...++++++||++||++|.+.++..+..........+ .......|.....+ ..++.+. .|...++++.|
T Consensus 28 dGyvvl~~vls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---~~~~~~~~l~~~p~l~~~~~~LlG 104 (277)
T TIGR02408 28 DGFLLLENLFSDDEVAALLAEVERMTRDPAIVRDEEAITEPGSNAVRSIFEVH---VLSPILARLVRDPRVANAARQILG 104 (277)
T ss_pred CCEEECcccCCHHHHHHHHHHHHHHHhcccccCCCcceecCCCCceEEEeccc---ccCHHHHHHHcChHHHHHHHHHcC
Confidence 3457899999999999999988654322111000000 00011222211111 1233222 34444555555
Q ss_pred CCCCCCCCcEEEecC-CCceeccccccccccccccCCCceEEEEEEEecCCC-CCccccC-CCCCCCC----CCCC--Cc
Q 026697 103 FPLENGEGLQVLHYE-AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNI----SAVP--WW 173 (235)
Q Consensus 103 ~~~~~~e~~~v~rY~-~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~-~GGeT~F-p~~~~~~----~~~~--~~ 173 (235)
-+.......-+.+.. .|+.+.||.|...-.........+.+|+.++|.|+. +.|.+.| |...... ...+ .+
T Consensus 105 ~~~~l~~~~l~~kp~~~g~~~~WHQD~~~w~~~~~~p~~~~vt~wiaLdD~t~eNG~l~vIPGSH~~~~~~~~~~~~~~~ 184 (277)
T TIGR02408 105 SDVYVHQSRINMKPGFKGTGFYWHSDFETWHAEDGMPSMRAVSCSIALTDNNETNGPLMLVPGSHRTFISCVGETPRDNY 184 (277)
T ss_pred CCeEEEeeeeeecCCCCCCCccCCcCCccccccCCCCCcCeEEEEEEcccCCCCCCCEEEecCCCCCcccCCccccchhh
Confidence 332111111123333 245788999974311000112336899999999987 4476776 5443210 0000 00
Q ss_pred c--------ccccc-------c-CcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC-eEeEEEee
Q 026697 174 N--------ELSEC-------G-KTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKW 227 (235)
Q Consensus 174 ~--------~~~~c-------~-~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G-~K~i~~~W 227 (235)
+ +..+. + ..-+.+.-++|++|+|. ..++|++.+..+. .|.++..=
T Consensus 185 ~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~~~aGDvl~f~---------~~~~H~S~~N~s~~~R~~l~l~ 246 (277)
T TIGR02408 185 KQSLKKQEYGVPDPVSLTKLADQGGISTFTGKAGSAVWFD---------CNTMHGSGSNITPWPRSNVFMV 246 (277)
T ss_pred hhhhhhhhcCCCCHHHHHHHHHhCCceeeccCCceEEEEc---------cccccCCCCCCCCCcceeEEEE
Confidence 0 00000 0 11235667999999996 4999999999876 45555433
No 15
>PHA02866 Hypothetical protein; Provisional
Probab=98.18 E-value=6.7e-06 Score=70.17 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=86.6
Q ss_pred cceeeEEeCCCC-CccccceeeeecccccCCCcHHHHHHHHHHhhccC--CCCCCCCCcEEEecCCCceecccccccccc
Q 026697 56 MRKSTVVDSDTG-KSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTF--FPLENGEGLQVLHYEAGQKYEPHFDYFMDE 132 (235)
Q Consensus 56 ~~~s~~~~~~~g-~~~~~~~R~s~~~~l~~~~~~~~~~l~~ri~~~~~--~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~ 132 (235)
+.+|.+.+...| +-.....|.+.++ +++..++. |+.++.. ...-..+.+.+.+|..|.+|.-|.|....
T Consensus 32 w~~s~i~~~~~~i~~~~~~~~k~k~~------~~v~~~v~-~~~~~~~~~~dv~v~~~~t~vk~~kg~~fdn~~~~~~~- 103 (333)
T PHA02866 32 WEDSDILRHRQFIPCEILVLEKSERT------KQVFGAVK-RVLASSLTDYDVYVCEHLTIVKCFKGVGFDNRFSILTE- 103 (333)
T ss_pred cchhhhhhhccCCceeeeehhhhhhh------HHHHHHHH-HHHhccCCCccEEEeeeEEEEEEecccccccceeEEEe-
Confidence 667777654444 2223344555443 56666665 4444321 11223567899999999999999997543
Q ss_pred ccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCccc
Q 026697 133 FNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHG 212 (235)
Q Consensus 133 ~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~ 212 (235)
.....+-.++++||+.+.+||+|.++-.+. ..+++ -+=++| |.+..|+
T Consensus 104 ---~~~~~~~Y~LvLyL~~p~~GGkt~iyv~~~----------------t~i~~----~~DvLF---------DKsl~h~ 151 (333)
T PHA02866 104 ---DRHRGREYTLVLHLSSPKNGGKTDVCVGDK----------------TVIST----ADDFLL---------EKRSEQL 151 (333)
T ss_pred ---ccCCceEEEEEEEEeccccCCceEEEeCCC----------------ceEee----ccceee---------ecccccc
Confidence 233457899999999999999999985321 11221 233566 4689999
Q ss_pred CCCCCcCeEeEEEe
Q 026697 213 GCPVIKGNKWSSTK 226 (235)
Q Consensus 213 g~pV~~G~K~i~~~ 226 (235)
..-|.+|+|.++..
T Consensus 152 S~~V~~G~K~Vali 165 (333)
T PHA02866 152 SNVVQEGEKIVVAV 165 (333)
T ss_pred ceeeecCcEEEEEE
Confidence 99999999987643
No 16
>PF09859 Oxygenase-NA: Oxygenase, catalysing oxidative methylation of damaged DNA; InterPro: IPR018655 This family of various hypothetical prokaryotic proteins, has no known function.
Probab=98.04 E-value=1.5e-05 Score=62.52 Aligned_cols=103 Identities=21% Similarity=0.281 Sum_probs=74.2
Q ss_pred CCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCC---CCCccccCCCCCCCCCCCCCccccccccCcCee
Q 026697 109 EGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV---EEGGETVFPNAQGNISAVPWWNELSECGKTGLS 185 (235)
Q Consensus 109 e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~---~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~ 185 (235)
....+++|.+|++-..|.|..-+. -=-+-+.+-||++ ++|||.+.-.-.++.. .....
T Consensus 62 ptplllrY~~gdyn~LHqdlyGe~-------vFPlQvv~lLs~Pg~DftGGEFVltEQrPR~Q------------SR~~V 122 (173)
T PF09859_consen 62 PTPLLLRYGPGDYNCLHQDLYGEH-------VFPLQVVILLSEPGEDFTGGEFVLTEQRPRMQ------------SRAMV 122 (173)
T ss_pred CchhhheeCCCCccccccCCCCCc-------ccCeEEEEEcCCCCCcccCceEEEEEecCCcc------------Ccccc
Confidence 346789999999999999964221 0124677789985 5899988754333221 13567
Q ss_pred EecccccEEEEe-ecCCC----CCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 186 IKPKMGDALLFW-SMKPD----ASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 186 V~P~~G~alvF~-n~~~~----g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+++++|+|+||. +.+|. |..-..+.|++.+|.+|+++.+-.=||.
T Consensus 123 ~~L~qGda~if~t~~RPv~G~rG~yRv~~RHgVS~vrsG~R~tLgliFHD 172 (173)
T PF09859_consen 123 LPLRQGDALIFATNHRPVRGARGYYRVNMRHGVSRVRSGERHTLGLIFHD 172 (173)
T ss_pred CCcCCCCEEEEecCCCCcCCCccceecccccccccccccceEEEEEEeec
Confidence 899999999997 44553 2223468999999999999998877663
No 17
>PF05721 PhyH: Phytanoyl-CoA dioxygenase (PhyH); InterPro: IPR008775 This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins as well as a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [].; PDB: 3GJA_A 3EMR_A 3OBZ_A 2OPW_A 3NNL_B 3NNF_A 3NNM_B 3NNJ_A 2FCV_B 2FCU_A ....
Probab=98.01 E-value=1.9e-05 Score=63.85 Aligned_cols=169 Identities=20% Similarity=0.123 Sum_probs=84.0
Q ss_pred CEEEEcCCCCHHHHHHHHHHhCCC----c---ceeeEEeCCCCCccccceeeeecccccCCC---cHHH-H-HHHHHHhh
Q 026697 32 RAFVYHNFLSKEECEYLINLATPH----M---RKSTVVDSDTGKSKDSRVRTSSGTFLARGR---DKII-R-DIEKRIAD 99 (235)
Q Consensus 32 ~i~~~~~~Ls~~Ec~~li~~~~~~----~---~~s~~~~~~~g~~~~~~~R~s~~~~l~~~~---~~~~-~-~l~~ri~~ 99 (235)
..++++++|+++||+.|.+..+.. . ............ . ....++.... ..+. . .+...+++
T Consensus 5 Gyvvi~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (211)
T PF05721_consen 5 GYVVIRNVLSPEEVERLREELDRLDDRALEPDQDVSDFFDESFF---G----DYTEQLAKSPNFYDLFLHPPRILDLVRA 77 (211)
T ss_dssp SEEEETTSS-HHHHHHHHHHHHHHHHHHTTTTTSCEEEESTSCC---C----TCCCCGCCCHHHHHHHHTHHHHHHHHHH
T ss_pred cEEEECCcCCHHHHHHHHHHHHHHHhhhhccccccccccccccc---c----ccccccccchhhHHHHhhHHHHHHHHHH
Confidence 357899999999999999987642 1 111111110000 0 0001111100 0111 2 45555666
Q ss_pred ccCCCCC----CCCCcE-EEecC-CCcee-ccccccccccccccCCCceEEEEEEEecCCC-CCccccC-CCCCCCCCC-
Q 026697 100 FTFFPLE----NGEGLQ-VLHYE-AGQKY-EPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNISA- 169 (235)
Q Consensus 100 ~~~~~~~----~~e~~~-v~rY~-~G~~f-~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~-~GGeT~F-p~~~~~~~~- 169 (235)
+.+.... ....++ +.+-. +|... .||.|...... ....+.+|+.++|.|+. +.|.+.+ |........
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~wH~D~~~~~~---~~~~~~~~~wi~L~d~~~~~G~~~v~pGSH~~~~~~ 154 (211)
T PF05721_consen 78 LLGSDVFVQNWLQSMYQDIVKPPGPGAAVQPWHQDAPYWHT---DPPENQLTVWIALDDITPENGPLEVVPGSHKWGVEP 154 (211)
T ss_dssp HHTSSEEEE--EEEEEEEEEE-TTTTC-EEEEBEHHHCSTE---ESSSCEEEEEEESS-BBTTCTCEEEETTGCCSCCEE
T ss_pred hhCCcchhhhhhHHHHHhhhhccccCCCCCCCCCCCccccc---CCccceEEEEEeeccCCcccCceEeecCCcCCCccc
Confidence 6654321 111121 23322 36655 99999764320 11578999999999985 5566665 443221000
Q ss_pred ----CCCccccc-------cccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 170 ----VPWWNELS-------ECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 170 ----~~~~~~~~-------~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
........ ......+.+..++|++|+|. ..++|++.|..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gdvl~~~---------~~~~H~s~~N~s~ 206 (211)
T PF05721_consen 155 HEERFPEEDFPEEDDEESDEDEDEWVPVPMKAGDVLFFH---------SRLIHGSGPNTSD 206 (211)
T ss_dssp ECCCCCCCCCCCCHHHHHHHHCSGCEEE-BSTTEEEEEE---------TTSEEEEE-B-SS
T ss_pred ccccccccccccccccccccccCceEEeecCCCeEEEEc---------CCccccCCCCCCc
Confidence 00000000 01134678899999999996 5999999997654
No 18
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=97.92 E-value=2.8e-05 Score=56.88 Aligned_cols=91 Identities=23% Similarity=0.271 Sum_probs=47.4
Q ss_pred EecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCc--cccccccCcCeeEecccc
Q 026697 114 LHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWW--NELSECGKTGLSIKPKMG 191 (235)
Q Consensus 114 ~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~--~~~~~c~~~~~~V~P~~G 191 (235)
..|.+|++-.+|.= ....++.++||+.+++.|.+.|.+..........+ ............++|+.|
T Consensus 5 ni~~~g~~~~~H~H-----------~~s~~SgVyYv~~p~~~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~G 73 (101)
T PF13759_consen 5 NIYRKGGYNEPHNH-----------PNSWLSGVYYVQVPEGSGPLRFHDPRGSFSFGAPFDNYDQNDLNSPYYIVEPEEG 73 (101)
T ss_dssp EEE-TT--EEEE-------------TT-SEEEEEECE--TTS-SEEEE-TTCCCGTTS----TTTTCCC-SEEEE---TT
T ss_pred EEeCCCCccCceEC-----------CCcCEEEEEEEECCCCCCceeeeCCCccceecccccccccCcccCceEEeCCCCC
Confidence 45678887777632 23589999999988888889997653321111101 111111135788999999
Q ss_pred cEEEEeecCCCCCCCCCCcccCCCCCcC-eEeEE
Q 026697 192 DALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSS 224 (235)
Q Consensus 192 ~alvF~n~~~~g~~d~~~~H~g~pV~~G-~K~i~ 224 (235)
++|||++ .+.|++.|.... +|+++
T Consensus 74 ~lvlFPs---------~l~H~v~p~~~~~~Risi 98 (101)
T PF13759_consen 74 DLVLFPS---------WLWHGVPPNNSDEERISI 98 (101)
T ss_dssp EEEEEET---------TSEEEE----SSS-EEEE
T ss_pred EEEEeCC---------CCEEeccCcCCCCCEEEE
Confidence 9999996 999999999875 67665
No 19
>KOG3844 consensus Predicted component of NuA3 histone acetyltransferase complex [Chromatin structure and dynamics]
Probab=97.90 E-value=0.00012 Score=65.02 Aligned_cols=167 Identities=18% Similarity=0.240 Sum_probs=102.6
Q ss_pred CCCCE-EEEcCCCCHHHHHHHHHHhCCC--cceeeEEeCCCCCccccceeeeec---ccccCCCcH--------HHHHHH
Q 026697 29 WEPRA-FVYHNFLSKEECEYLINLATPH--MRKSTVVDSDTGKSKDSRVRTSSG---TFLARGRDK--------IIRDIE 94 (235)
Q Consensus 29 ~~P~i-~~~~~~Ls~~Ec~~li~~~~~~--~~~s~~~~~~~g~~~~~~~R~s~~---~~l~~~~~~--------~~~~l~ 94 (235)
..|+- +++++|+++...+.+.+..... +.+- ...-+|..++ +-++.-+-+ +.....
T Consensus 33 ngPf~h~~i~~~vnd~~l~~vrkei~~~~~f~~k----------~tDlyr~~QtgdL~nl~~le~p~lf~~r~~Lyke~r 102 (476)
T KOG3844|consen 33 NGPFNHFIIRDFVNDSLLRVVRKEIHGSIHFTEK----------ETDLYRVLQTGDLANLEGLEFPALFSFRDSLYKEAR 102 (476)
T ss_pred cCCCcceeeeccCCHHHHHHHHHHHhhccchhhh----------cchhhheeccccccccccccchhHHHHHHHHHHHHH
Confidence 44543 6799999988888887655432 2110 1111221111 111110111 222233
Q ss_pred HHHhhccCCCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCC----CCcccc-CCCCCCCCCC
Q 026697 95 KRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE----EGGETV-FPNAQGNISA 169 (235)
Q Consensus 95 ~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~----~GGeT~-Fp~~~~~~~~ 169 (235)
..+..++|--...--++....|..|.+--.|-|-. +.|.+++++||-|.. -||++. ||........
T Consensus 103 ~~~q~vtg~~s~sk~Dms~s~Y~kgd~LL~HDD~i---------etRriaFilYL~~~Dwds~~GG~L~Lf~~d~~~~P~ 173 (476)
T KOG3844|consen 103 GEIQDVTGGLSTSKIDMSGSYYRKGDHLLCHDDVI---------ETRRIAFILYLVDPDWDSEYGGELRLFPDDCPSQPK 173 (476)
T ss_pred HHHHhccCccccceeeeceeeeeccceeccccccc---------cceEEEEEEEecCcccccccCceeEecccccccCcc
Confidence 34445554322223467889999999999997743 469999999999865 388777 4543221110
Q ss_pred CCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCe-EeEEEeeecccc
Q 026697 170 VPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN-KWSSTKWIRVNE 232 (235)
Q Consensus 170 ~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~-K~i~~~W~~~~~ 232 (235)
.--.++.|.-.+.++|.. -+-+.|.+..|.+.+ |..|++|||.+.
T Consensus 174 -----------s~~asl~P~~Nql~fFeV-------sp~SFH~V~Ev~sde~RlSIsGWfH~p~ 219 (476)
T KOG3844|consen 174 -----------SVAASLEPQWNQLVFFEV-------SPISFHDVEEVLSDEPRLSISGWFHFPQ 219 (476)
T ss_pred -----------chhhccCcccceEEEEEe-------cccchhhHHHHhccCcceeEeeeecCCc
Confidence 013458899999999964 378999999999865 499999999864
No 20
>TIGR01762 chlorin-enz chlorinating enzymes. This model represents a a group of highly homologous enzymes related to dioxygenases which chlorinate amino acid methyl groups. BarB1 and BarB2 are proposed to trichlorinate one of the methyl groups of a leucine residue in the biosynthesis of barbamide in the cyanobacterium Lyngbya majuscula. SyrB2 is proposed to chlorinate the methyl group of threonine in the biosynthesis of syringomycin in Pseudomonas syringae. CmaB is proposed to chlorinate the beta-methyl group of alloisoleucine in the process of ring closure in the biosynthesis of coronamic acid, a component of coronatine also in Pseudomonas syringae.
Probab=97.47 E-value=0.004 Score=54.18 Aligned_cols=182 Identities=14% Similarity=0.140 Sum_probs=94.5
Q ss_pred CCEEEEcCCCCHHHHHHHHHHhCCCcc-eeeEEeCCCCCccccceeeeecccccCCCcHHH------HHHHHHHhhccCC
Q 026697 31 PRAFVYHNFLSKEECEYLINLATPHMR-KSTVVDSDTGKSKDSRVRTSSGTFLARGRDKII------RDIEKRIADFTFF 103 (235)
Q Consensus 31 P~i~~~~~~Ls~~Ec~~li~~~~~~~~-~s~~~~~~~g~~~~~~~R~s~~~~l~~~~~~~~------~~l~~ri~~~~~~ 103 (235)
...++++++||++|+++|.+.++..+. ++.......+ ...|.+. +... .++.+ ..|...++++.|-
T Consensus 14 ~Gyv~~~~~~s~eei~~L~~~~~~~l~~~~~~~~~~~~----~~~~~~~--~~~~-~~~~~~~l~~~~~l~~~~~~llG~ 86 (288)
T TIGR01762 14 NGFIGPFTLYSPEEMKETWKRIRLRLLDRSAAPYQDLG----GTNIANY--DRHL-DDDFLASHICRPEICHRVESILGP 86 (288)
T ss_pred CCEEeCcCCCCHHHHHHHHHHHHHHhhccccccccCCC----CceeEee--eecc-cCHHHHHHhcCHHHHHHHHHHhCC
Confidence 345689999999999999998754321 1110000000 1112111 1111 12222 2344455556553
Q ss_pred CCCCCCCcEEEecCCCceeccccccccccccc--------cCCCceEEEEEEEecCCC-CCccccC-CCCCCCCC---CC
Q 026697 104 PLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT--------KNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNIS---AV 170 (235)
Q Consensus 104 ~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~--------~~~~~R~~T~liYLNd~~-~GGeT~F-p~~~~~~~---~~ 170 (235)
+.......-+.+...++.+.||.|...-.... .....+.+|+.+-|.|+. +-|.+.| |....... ..
T Consensus 87 ~v~l~~~~~~~K~pg~~~~~wHQD~~y~~~~~~~~~~~p~~~~~~~~vt~wiaLdd~t~eNG~L~viPGSH~~~~~~~~~ 166 (288)
T TIGR01762 87 NVLCWRTEFFPKYPGDEGTDWHQADTFANASGKPQLVWPENEEFGGTITVWTAFTDATIENGCMQFIPGTHNSMNYDETR 166 (288)
T ss_pred cEEeeeceeeeeCCCCCCCCCCccCcccccCCcccccccccCCCCCeEEEEEEcccCCcccCCEEEECCCCCCCCCCccc
Confidence 32222222345555555689999964321100 012247899999999986 4566665 43322100 00
Q ss_pred ---------------CC--------cccc------ccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC--
Q 026697 171 ---------------PW--------WNEL------SECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-- 219 (235)
Q Consensus 171 ---------------~~--------~~~~------~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G-- 219 (235)
.. +..+ ..+....+.+.-++|++++|. ..++|++.|.++.
T Consensus 167 ~~~~~p~~~~~~~~g~~~~~~~~~~~~~l~~d~~~~~~~~~~v~~~lkaGd~~~f~---------~~t~HgS~~N~S~~~ 237 (288)
T TIGR01762 167 RMTFEPDANNSVVKGGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFW---------STLMHASYPNSGESQ 237 (288)
T ss_pred ccccCccccccccccccccccccccchhhcccccCCccccceeeeeeCCceEEEEC---------CCceecCCCCCCCCc
Confidence 00 0000 001113456777999999995 5999999999885
Q ss_pred eEeEEE-eee
Q 026697 220 NKWSST-KWI 228 (235)
Q Consensus 220 ~K~i~~-~W~ 228 (235)
.|..++ .|+
T Consensus 238 ~R~~~~~ry~ 247 (288)
T TIGR01762 238 MRMGFASRYV 247 (288)
T ss_pred eEEEEEEEEc
Confidence 355543 344
No 21
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=97.41 E-value=0.0009 Score=55.15 Aligned_cols=93 Identities=18% Similarity=0.133 Sum_probs=60.5
Q ss_pred EEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCC--CCCccccccccCcCeeEecc
Q 026697 112 QVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISA--VPWWNELSECGKTGLSIKPK 189 (235)
Q Consensus 112 ~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~--~~~~~~~~~c~~~~~~V~P~ 189 (235)
=+.++.+|++-..|.= ....++-.+||+.+..+|.+.|.+....... .+.-..........+.|+|+
T Consensus 99 W~ni~~~Gg~h~~H~H-----------p~~~lSgvyYl~~p~~~g~~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~v~P~ 167 (201)
T TIGR02466 99 WVNILPQGGTHSPHLH-----------PGSVISGTYYVQTPENCGAIKFEDPRLDDMMAAPMRIPNAKRAVQRFVYVPPQ 167 (201)
T ss_pred eEEEcCCCCccCceEC-----------CCceEEEEEEEeCCCCCCceeEecCcchhhhccccccCccccccCccEEECCC
Confidence 3466788887666532 1358999999998888888888653221100 00000000011235679999
Q ss_pred cccEEEEeecCCCCCCCCCCcccCCCCCc-CeEeEE
Q 026697 190 MGDALLFWSMKPDASLDPSSLHGGCPVIK-GNKWSS 224 (235)
Q Consensus 190 ~G~alvF~n~~~~g~~d~~~~H~g~pV~~-G~K~i~ 224 (235)
.|++|+|++ .+.|++.|... ++|+++
T Consensus 168 ~G~lvlFPS---------~L~H~v~p~~~~~~RISi 194 (201)
T TIGR02466 168 EGRVLLFES---------WLRHEVPPNESEEERISV 194 (201)
T ss_pred CCeEEEECC---------CCceecCCCCCCCCEEEE
Confidence 999999997 89999999986 467665
No 22
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A ....
Probab=97.09 E-value=0.0045 Score=50.17 Aligned_cols=154 Identities=22% Similarity=0.203 Sum_probs=74.1
Q ss_pred EEEEcCCCCHHHHHHHHHHhCCC--cceeeEEeCCCCCccc---------------cceeeeec-ccccC---CCcHHHH
Q 026697 33 AFVYHNFLSKEECEYLINLATPH--MRKSTVVDSDTGKSKD---------------SRVRTSSG-TFLAR---GRDKIIR 91 (235)
Q Consensus 33 i~~~~~~Ls~~Ec~~li~~~~~~--~~~s~~~~~~~g~~~~---------------~~~R~s~~-~~l~~---~~~~~~~ 91 (235)
+++++||||++|.++|++..... +....... +.... ..++.+.. .+-.. .-.+.+.
T Consensus 2 ~~~~~~fls~~e~~~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~y~y~~~~~~~~~~~~~~p~~l~ 78 (194)
T PF13532_consen 2 LYYIPNFLSEEEAAELLNELRESAPFRQPTYPM---GKVYSLPRKLCGGLSWVGDGPSYRYSGKRPVRSKPWPPFPEWLS 78 (194)
T ss_dssp EEEETTSS-HHHHHHHHHHHHHHS--B-GCCCC---CCECCECCE-SSEEEEEECT--CCCTCC-EECCCEBSCCHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHhhCCCcCCeEcC---CCEEccceecceeeEEECCCCCeEcCCccccCCCCCCCccHHHH
Confidence 57899999999999999988621 11111000 00000 00111100 00000 0123445
Q ss_pred HHHHHHhhccC-CCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCC
Q 026697 92 DIEKRIADFTF-FPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAV 170 (235)
Q Consensus 92 ~l~~ri~~~~~-~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~ 170 (235)
.+.+++..... .+........+..|..|+.-.+|.|.... ..+..++|+.+ |+..+|-......
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~liN~Y~~g~~i~~H~D~~~~-----~~~~~I~slSL-------G~~~~~~f~~~~~--- 143 (194)
T PF13532_consen 79 RLLERLVEATGIPPGWRPNQCLINYYRDGSGIGPHSDDEEY-----GFGPPIASLSL-------GSSRVFRFRNKSD--- 143 (194)
T ss_dssp HHHHHHHHHHT-SHSS--SEEEEEEESSTT-EEEE---TTC------CCSEEEEEEE-------ES-EEEEEEECGG---
T ss_pred HHHHHHHHHhccccCCCCCEEEEEecCCCCCcCCCCCcccc-----cCCCcEEEEEE-------ccCceEEEeeccC---
Confidence 55555554333 22222345778899999999999997521 23556777665 3333443221100
Q ss_pred CCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 171 PWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 171 ~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
.+..+.|.-..|+++++.. ...... |++.++..+
T Consensus 144 ---------~~~~~~~~L~~gsl~vm~g-----~~r~~~-H~I~~~~~~ 177 (194)
T PF13532_consen 144 ---------DDEPIEVPLPPGSLLVMSG-----EARYDW-HGIPPVKKD 177 (194)
T ss_dssp ---------TS-EEEEEE-TTEEEEEET-----THHHHE-EEE-S-SCE
T ss_pred ---------CCccEEEEcCCCCEEEeCh-----HHhhhe-eEcccccCC
Confidence 0135788889999999962 222344 999998874
No 23
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional
Probab=96.85 E-value=0.037 Score=45.98 Aligned_cols=160 Identities=19% Similarity=0.164 Sum_probs=90.7
Q ss_pred CCCCEEEEcCCCCHHHHHHHHHHhCCC-----cceeeEEeCC--------CCC--c--cccceeeeeccccc-C---CCc
Q 026697 29 WEPRAFVYHNFLSKEECEYLINLATPH-----MRKSTVVDSD--------TGK--S--KDSRVRTSSGTFLA-R---GRD 87 (235)
Q Consensus 29 ~~P~i~~~~~~Ls~~Ec~~li~~~~~~-----~~~s~~~~~~--------~g~--~--~~~~~R~s~~~~l~-~---~~~ 87 (235)
..|.++++++|. .++.++|++..... ++...+-++. -|. . ....+|-+...-.. . .-+
T Consensus 16 ~~~g~~~~~~~~-~~~~~~l~~~~~~~~~~~p~~~~~~~gg~~msv~mt~~G~~~W~~d~~~YrYs~~~~~~~~pwp~~P 94 (213)
T PRK15401 16 LAPGAVLLRGFA-LAAAEALLAAIEAVAAQAPFRHMVTPGGYTMSVAMTNCGALGWVTDRRGYRYSPIDPLTGKPWPAMP 94 (213)
T ss_pred cCCCcEEeCCCC-HHHHHHHHHHHHHHHhcCCccceecCCCCcceeEEeccccceEecCCCCcccCCcCCCCCCCCCCch
Confidence 677889999995 88888888766541 2221111000 010 0 00123333211000 0 012
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCC
Q 026697 88 KIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI 167 (235)
Q Consensus 88 ~~~~~l~~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~ 167 (235)
+.+..|.++++...+.+....+...|..|.+|+.-.+|.|.... ....-++++.+ |.+-.|..-..+.
T Consensus 95 ~~l~~L~~~~~~~~~~~~~~p~a~LvN~Y~~G~~mg~H~D~~E~-----~~~~pI~SvSL-------G~~~~F~~~~~~~ 162 (213)
T PRK15401 95 ASFLALAQRAAAAAGFPGFQPDACLINRYAPGAKLSLHQDKDER-----DFRAPIVSVSL-------GLPAVFQFGGLKR 162 (213)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEEeccCcCccccccCCCcc-----cCCCCEEEEeC-------CCCeEEEecccCC
Confidence 36788888888777764444567889999999999999996321 11223444442 4444554321110
Q ss_pred CCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 168 SAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 168 ~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
.....+|.-.-|++||+. |. ....+|++-++..|
T Consensus 163 ------------~~~~~~l~L~~Gdllvm~-----G~-sr~~~HgVp~~~~~ 196 (213)
T PRK15401 163 ------------SDPLQRILLEHGDVVVWG-----GP-SRLRYHGILPLKAG 196 (213)
T ss_pred ------------CCceEEEEeCCCCEEEEC-----ch-HhheeccCCcCCCC
Confidence 012568899999999994 22 24567999888765
No 24
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=96.63 E-value=0.0079 Score=48.32 Aligned_cols=78 Identities=26% Similarity=0.310 Sum_probs=57.5
Q ss_pred eccccccccccccccCCCceEEEEEEEecCC-CCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecC
Q 026697 122 YEPHFDYFMDEFNTKNGGQRMATVLMYLSDV-EEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMK 200 (235)
Q Consensus 122 f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~-~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~ 200 (235)
-..|.|... .+.-+++++-|.-. +.||..++|..+.+ -.+++|.|..|++|+|-.
T Consensus 87 t~~HrD~~~--------~~~~~~~~~t~~~gd~~~g~l~lp~~~~~--------------~~g~~~~~~~GtVl~~~~-- 142 (171)
T PF12851_consen 87 THSHRDTHN--------MPNGYDVLCTLGRGDYDGGRLELPGLDPN--------------ILGVAFAYQPGTVLIFCA-- 142 (171)
T ss_pred ccceecCCC--------CCCCeEEEEecCCccccCceEeccccccc--------------cCCEEEecCCCcEEEEcc--
Confidence 345777532 22346666666543 78999999983221 148999999999999964
Q ss_pred CCCCCCCCCcccCCCCCc-----CeEeEEEeeec
Q 026697 201 PDASLDPSSLHGGCPVIK-----GNKWSSTKWIR 229 (235)
Q Consensus 201 ~~g~~d~~~~H~g~pV~~-----G~K~i~~~W~~ 229 (235)
....|+..||.. |+|+.+.-+.|
T Consensus 143 ------~~~~Hgvtpv~~~~~~~~~R~slvfy~h 170 (171)
T PF12851_consen 143 ------KRELHGVTPVESPNRNHGTRISLVFYQH 170 (171)
T ss_pred ------cceeeecCcccCCCCCCCeEEEEEEEeE
Confidence 468999999997 99999987765
No 25
>COG3826 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.33 E-value=0.06 Score=43.32 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=70.1
Q ss_pred CCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCC---CCccccCCCCCCCCCCCCCccccccccCcCee
Q 026697 109 EGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE---EGGETVFPNAQGNISAVPWWNELSECGKTGLS 185 (235)
Q Consensus 109 e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~---~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~ 185 (235)
....+++|.+|++--.|.|-.-+. -=-+-+.|-|+++. .|||.+.-.-.++.. ...-.
T Consensus 124 pTpLlLqYgpgD~NcLHQDLYGel-------vFPLQvailLsePg~DfTGGEF~lvEQRPR~Q------------Sr~~v 184 (236)
T COG3826 124 PTPLLLQYGPGDYNCLHQDLYGEL-------VFPLQVAILLSEPGTDFTGGEFVLVEQRPRMQ------------SRPTV 184 (236)
T ss_pred CCceeEEecCCccchhhhhhhhce-------eeeeeEEEeccCCCCcccCceEEEEecccccc------------cCCce
Confidence 456789999999999999964211 11245667788864 899776643322211 13456
Q ss_pred EecccccEEEEeec-CCC----CCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 186 IKPKMGDALLFWSM-KPD----ASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 186 V~P~~G~alvF~n~-~~~----g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
|+-.+|.+++|-.. +|- |..-..+.|.+.-+.+|+++.+-.=||.
T Consensus 185 vpLrqG~g~vFavr~RPv~gtrG~~r~~lRHGvS~lRSG~R~t~GiIFHD 234 (236)
T COG3826 185 VPLRQGDGVVFAVRDRPVQGTRGWYRVPLRHGVSRLRSGERHTVGIIFHD 234 (236)
T ss_pred eeccCCceEEEEeecCcccCccCccccchhcchhhhhcccceeeEEEeec
Confidence 77789999999632 222 3333467899999999999998877764
No 26
>KOG3200 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.74 E-value=0.05 Score=43.44 Aligned_cols=97 Identities=16% Similarity=0.221 Sum_probs=59.4
Q ss_pred EEcCCCCEEEEcCCCCHHHHHHHHHHhCCCcce-eeEEeC----CCCCccccceeeeecccccCCCcHHHHHHHHHHhhc
Q 026697 26 VISWEPRAFVYHNFLSKEECEYLINLATPHMRK-STVVDS----DTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADF 100 (235)
Q Consensus 26 ~ls~~P~i~~~~~~Ls~~Ec~~li~~~~~~~~~-s~~~~~----~~g~~~~~~~R~s~~~~l~~~~~~~~~~l~~ri~~~ 100 (235)
++...|..++|+||+++||-..+.+..+....+ -.+..+ .-|+.+ -....+.+.-++-++.+...|..+
T Consensus 7 ~V~~~pt~~YIPnfIt~EEe~~~lshIe~ap~pkW~~L~NRRLqNyGGvv------h~~glipeelP~wLq~~v~kinnl 80 (224)
T KOG3200|consen 7 IVKSAPTMIYIPNFITEEEENLYLSHIENAPQPKWRVLANRRLQNYGGVV------HKTGLIPEELPPWLQYYVDKINNL 80 (224)
T ss_pred EecccceEEEcCCccChHHHHHHHHHHhcCCCchhHHHHhhhhhhcCCcc------ccCCcCccccCHHHHHHHHHhhcc
Confidence 455678889999999999999999988653211 000000 001100 011233333355666777777654
Q ss_pred cCCCCCCCCCcEEEecCCCceeccccccc
Q 026697 101 TFFPLENGEGLQVLHYEAGQKYEPHFDYF 129 (235)
Q Consensus 101 ~~~~~~~~e~~~v~rY~~G~~f~~H~D~~ 129 (235)
.-++. ......+..|.+||.--||.|+-
T Consensus 81 glF~s-~~NHVLVNeY~pgqGImPHtDGP 108 (224)
T KOG3200|consen 81 GLFKS-PANHVLVNEYLPGQGIMPHTDGP 108 (224)
T ss_pred cccCC-CcceeEeecccCCCCcCcCCCCC
Confidence 33333 34467788999999999999984
No 27
>PHA02923 hypothetical protein; Provisional
Probab=95.62 E-value=0.061 Score=46.43 Aligned_cols=98 Identities=14% Similarity=0.166 Sum_probs=66.6
Q ss_pred cHHHHHHHHHHhhccCCC--CCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCC
Q 026697 87 DKIIRDIEKRIADFTFFP--LENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQ 164 (235)
Q Consensus 87 ~~~~~~l~~ri~~~~~~~--~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~ 164 (235)
+.+...|+..|-.-+... ......+.+..|++|.+ .|. .....-..+++||+.+..||+|.|+..+
T Consensus 43 ~di~~~ir~liy~elk~v~~V~V~n~iT~ikYekgd~--~~l----------~~~~~~y~LvLyL~~p~~GGt~i~~~~~ 110 (315)
T PHA02923 43 IDISECIREILYKQFKNVRNIEVSSTISFIKYNPFND--TTL----------TDDNMGYYLVIYLNRPKSGKTLIYPTPE 110 (315)
T ss_pred hHHHHHHHHHHHHhccCcceEEEeceEEEEEEcCCCc--cee----------ecCceEEEEEEEEeccCCCCeEEEecCC
Confidence 557777766665432211 12345688999999995 111 1123788899999999999999998743
Q ss_pred CCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEe
Q 026697 165 GNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTK 226 (235)
Q Consensus 165 ~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~ 226 (235)
+ . +.- -+=++| |....|+..-|.+|+|.||-.
T Consensus 111 t-----------------~--i~~--~~DvLF---------dKsl~h~s~~V~~G~K~VAl~ 142 (315)
T PHA02923 111 T-----------------V--ITS--SEDIMF---------SKSLNFRFENVKRGYKLVMCS 142 (315)
T ss_pred C-----------------e--Eee--ccceee---------ecccccceeeeecCcEEEEEE
Confidence 1 1 221 123566 468999999999999998765
No 28
>COG3145 AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair]
Probab=91.60 E-value=4.9 Score=32.90 Aligned_cols=82 Identities=21% Similarity=0.298 Sum_probs=52.2
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEecCCCceeccccccccccccccCCCce--EEEEEEEecCCCCCccccCCCCCCCC
Q 026697 90 IRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQR--MATVLMYLSDVEEGGETVFPNAQGNI 167 (235)
Q Consensus 90 ~~~l~~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R--~~T~liYLNd~~~GGeT~Fp~~~~~~ 167 (235)
+-.+...+....+.+....|..-+..|.+|..-.+|.|.... ..+ ++++. | |....|-....+.
T Consensus 87 l~~~~~~~~~~~g~~~~~~ea~Lvn~Y~pGd~ig~HqD~~e~-------~~~~~v~slS--L-----g~~~~F~~~~~~r 152 (194)
T COG3145 87 LLALFHDLFGAAGYPFEGPEAVLVNRYRPGASIGWHQDKDEE-------DDRPPVASLS--L-----GAPCIFRLRGRRR 152 (194)
T ss_pred cHHHHHHHHHHhcCCCCChhheeEEeccCCCccccccccccc-------cCCCceEEEe--c-----CCCeEEEeccccC
Confidence 334455555567777777788999999999999999996432 222 33333 2 3333443221110
Q ss_pred CCCCCccccccccCcCeeEecccccEEEEe
Q 026697 168 SAVPWWNELSECGKTGLSIKPKMGDALLFW 197 (235)
Q Consensus 168 ~~~~~~~~~~~c~~~~~~V~P~~G~alvF~ 197 (235)
.+...++.-..|++|++-
T Consensus 153 ------------~~~~~~~~L~~Gdvvvm~ 170 (194)
T COG3145 153 ------------RGPGLRLRLEHGDVVVMG 170 (194)
T ss_pred ------------CCCceeEEecCCCEEEec
Confidence 024688899999999994
No 29
>PF06822 DUF1235: Protein of unknown function (DUF1235); InterPro: IPR009641 This family contains a number of poxviral proteins, which include Vaccinia virus, A37, the function of which is unknown.
Probab=91.27 E-value=1.4 Score=37.69 Aligned_cols=108 Identities=21% Similarity=0.284 Sum_probs=78.8
Q ss_pred cHHHHHHHHHHhhccCCCCCCCCCcEEEecCCCceecc-ccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCC
Q 026697 87 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEP-HFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQG 165 (235)
Q Consensus 87 ~~~~~~l~~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~-H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~ 165 (235)
..++..|.+++.+- .-.++.+++..|+.|+-++. +.+ ..+..++++=|..+..||...+.....
T Consensus 32 ~~i~~EI~kh~~e~----V~~~~~i~i~~f~~~~~~~~~~~~-----------~~~~sr~lvCi~sakkGG~iii~~~~~ 96 (266)
T PF06822_consen 32 KIILSEIEKHINEP----VYVNNLISIQVFDKGQCYKSRIQD-----------NSSLSRILVCIQSAKKGGCIIIRNTIS 96 (266)
T ss_pred HHHHHHHHHhcCCe----EEecCcEEEEEEeCCCceeccccC-----------CCcceeEEEEeeccccCCeEEEeeccc
Confidence 35666777666443 22356899999999997743 222 236778888999999999888766432
Q ss_pred CCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeeccccc
Q 026697 166 NISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEY 233 (235)
Q Consensus 166 ~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~~~ 233 (235)
+ ..-.++|..|.||+-. |.....+.+|.+|.-.++..=+..+..
T Consensus 97 ~---------------~kkii~~~~~~aVlLs---------pl~~y~Vs~V~~G~~i~i~l~idIPSm 140 (266)
T PF06822_consen 97 N---------------DKKIITPNQNMAVLLS---------PLADYDVSNVTKGSMIIIVLDIDIPSM 140 (266)
T ss_pred C---------------CceEEecCCCeEEEec---------chhheEEEEecCCcEEEEEEEeccCcc
Confidence 2 3678999999999985 577788899999988887776665543
No 30
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=90.67 E-value=2.2 Score=36.58 Aligned_cols=87 Identities=17% Similarity=0.199 Sum_probs=54.2
Q ss_pred CcEEEecCCC------ceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G------~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+- -...+|+|. -.+|+|+. +++ || +..... ...
T Consensus 117 ~lrl~~YP~~~~~~~~~g~~~HtD~------------g~lTlL~q-d~v--~G-LqV~~~-----------------g~W 163 (262)
T PLN03001 117 NITVSYYPPCPQPELTLGLQSHSDF------------GAITLLIQ-DDV--EG-LQLLKD-----------------AEW 163 (262)
T ss_pred hheeecCCCCCCcccccCCcCCcCC------------CeeEEEEe-CCC--Cc-eEEeeC-----------------CeE
Confidence 4788889762 124567774 36788754 343 45 443221 248
Q ss_pred eeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+.|+|..|..||-- ....+| .-..++|++.-....+||++.-+++-
T Consensus 164 i~V~p~p~a~vVNiGD~l~~~tng-~~~S~~HRVv~~~~~~R~Sia~F~~p 213 (262)
T PLN03001 164 LMVPPISDAILIIIADQTEIITNG-NYKSAQHRAIANANKARLSVATFHDP 213 (262)
T ss_pred EECCCCCCcEEEEccHHHHHHhCC-ccccccceEEcCCCCCEEEEEEEEcC
Confidence 89999999887751 011122 23578999986555679998877663
No 31
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=88.63 E-value=4.2 Score=36.28 Aligned_cols=87 Identities=18% Similarity=0.183 Sum_probs=53.7
Q ss_pred CcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+-. ...+|+|. -.+|+|+- ++ .|| +.-... ...
T Consensus 201 ~lRl~~YPp~~~~~~~~g~~aHTD~------------g~lTlL~Q-d~--v~G-LQV~~~-----------------g~W 247 (341)
T PLN02984 201 VIRVYRYPQCSNEAEAPGMEVHTDS------------SVISILNQ-DE--VGG-LEVMKD-----------------GEW 247 (341)
T ss_pred eEEEEeCCCCCCcccccCccCccCC------------CceEEEEe-CC--CCC-eeEeeC-----------------Cce
Confidence 58999997632 23467775 35777754 33 355 443221 258
Q ss_pred eeEecccccEEEEe----ecCCCCCCCCCCcccCC-CCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFW----SMKPDASLDPSSLHGGC-PVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~-pV~~G~K~i~~~W~~~ 230 (235)
+.|+|..|.+||-- ....+| .-..+.|++. +-....||.+.-+++-
T Consensus 248 v~V~p~pgalVVNiGD~Le~wTNg-~~kSt~HRVv~~~~~~~R~Sia~F~~P 298 (341)
T PLN02984 248 FNVKPIANTLVVNLGDMMQVISDD-EYKSVLHRVGKRNKKKERYSICYFVFP 298 (341)
T ss_pred EECCCCCCeEEEECChhhhhhcCC-eeeCCCCccccCCCCCCeEEEEEEecC
Confidence 99999999988862 111122 2357899994 4434578988777654
No 32
>TIGR00568 alkb DNA alkylation damage repair protein AlkB. Proteins in this family have an as of yet undetermined function in the repair of alkylation damage to DNA. Alignment and family designation based on phylogenomic analysis of Jonathan A. Eisen (PhD Thesis, Stanford University, 1999).
Probab=88.02 E-value=3.8 Score=32.79 Aligned_cols=87 Identities=18% Similarity=0.172 Sum_probs=55.6
Q ss_pred cHHHHHHHHHHhhccCCCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCC
Q 026697 87 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGN 166 (235)
Q Consensus 87 ~~~~~~l~~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~ 166 (235)
++.+..|.++++...+.+....+..-|..|.+|+.-++|.|.... ....-++++. | |....|..-...
T Consensus 73 P~~L~~L~~~v~~~~g~~~~~~n~~LvN~Y~~Gd~mg~H~D~~e~-----~~~~pI~SvS--L-----G~~r~F~~~~~~ 140 (169)
T TIGR00568 73 PQDLGDLCERVATAAGFPDFQPDACLVNRYAPGATLSLHQDRDEP-----DLRAPLLSVS--L-----GLPAIFLIGGLK 140 (169)
T ss_pred CHHHHHHHHHHHHHhCCCCCCCCEEEEEeecCCCccccccccccc-----cCCCCEEEEe--C-----CCCEEEEecCCc
Confidence 367888999999888765545567888999999999999994211 1112233333 2 444445432110
Q ss_pred CCCCCCccccccccCcCeeEecccccEEEEe
Q 026697 167 ISAVPWWNELSECGKTGLSIKPKMGDALLFW 197 (235)
Q Consensus 167 ~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~ 197 (235)
. ++....+.-..|++||+.
T Consensus 141 ~------------~~~~~~l~L~sGsllvM~ 159 (169)
T TIGR00568 141 R------------NDPPKRLRLHSGDVVIMG 159 (169)
T ss_pred C------------CCceEEEEeCCCCEEEEC
Confidence 0 013577889999999994
No 33
>PLN02216 protein SRG1
Probab=87.33 E-value=3.5 Score=36.95 Aligned_cols=88 Identities=16% Similarity=0.168 Sum_probs=53.8
Q ss_pred CcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+-. ...+|+|. -.+|+|+--++ .|| +..... ...
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~------------g~lTlL~q~~~--v~G-LQV~~~-----------------g~W 258 (357)
T PLN02216 211 SIRMNYYPPCPQPDQVIGLTPHSDA------------VGLTILLQVNE--VEG-LQIKKD-----------------GKW 258 (357)
T ss_pred eeEEeecCCCCCcccccCccCcccC------------ceEEEEEecCC--CCc-eeEEEC-----------------CEE
Confidence 58888997621 24567664 35777754444 345 443211 258
Q ss_pred eeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+.|+|.+|.+||--- ...+| .-..++|++......+||++.-+++-
T Consensus 259 i~V~p~pgalvVNiGD~L~~~TNG-~~kS~~HRVv~~~~~~R~Si~~F~~P 308 (357)
T PLN02216 259 VSVKPLPNALVVNVGDILEIITNG-TYRSIEHRGVVNSEKERLSVATFHNT 308 (357)
T ss_pred EECCCCCCeEEEEcchhhHhhcCC-eeeccCceeecCCCCCEEEEEEEecC
Confidence 999999999887520 11122 23578999865555689998777653
No 34
>PLN02904 oxidoreductase
Probab=86.93 E-value=5.5 Score=35.76 Aligned_cols=88 Identities=16% Similarity=0.157 Sum_probs=54.6
Q ss_pred CCcEEEecCCC------ceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCc
Q 026697 109 EGLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 182 (235)
Q Consensus 109 e~~~v~rY~~G------~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 182 (235)
..+++.+|.+- -.-.+|+|. -.+|+|+ .|+ || +...... ..
T Consensus 208 ~~lrl~~YPp~p~~~~~~g~~~HtD~------------g~lTlL~--qd~--~G-LQV~~~~----------------g~ 254 (357)
T PLN02904 208 QVMAVNCYPACPEPEIALGMPPHSDF------------GSLTILL--QSS--QG-LQIMDCN----------------KN 254 (357)
T ss_pred cEEEeeecCCCCCcccccCCcCccCC------------CceEEEe--cCC--Ce-eeEEeCC----------------CC
Confidence 35888899862 123467775 3678885 453 44 5442211 24
Q ss_pred CeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 183 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 183 ~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
.+.|+|..|.+||--- ...+| .-..++|++......+||.+.-++.-
T Consensus 255 Wi~V~p~pgalVVNiGD~Le~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~p 305 (357)
T PLN02904 255 WVCVPYIEGALIVQLGDQVEVMSNG-IYKSVVHRVTVNKDYKRLSFASLHSL 305 (357)
T ss_pred EEECCCCCCeEEEEccHHHHHHhCC-eeeccCCcccCCCCCCEEEEEEeecC
Confidence 8999999999888520 01112 23578999965555689998877654
No 35
>PF14033 DUF4246: Protein of unknown function (DUF4246)
Probab=86.81 E-value=3.4 Score=38.89 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=58.3
Q ss_pred ccccccccccccccCCCceEEEEEEEecCCC-CCccccCCCCCC-CC--------CCCCCc----cccc---cccCcCee
Q 026697 123 EPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVFPNAQG-NI--------SAVPWW----NELS---ECGKTGLS 185 (235)
Q Consensus 123 ~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~-~GGeT~Fp~~~~-~~--------~~~~~~----~~~~---~c~~~~~~ 185 (235)
.||.++.. +.+-.+|.|.|+.... ....+.|..... .. ..+..| .++. .|-..-=+
T Consensus 364 ~WHvEG~l-------NE~IvATalYyyd~eNIT~s~L~FR~~~~d~~~~~~~~~~q~~~~~~~~~~g~~~~~~~~q~~Gs 436 (501)
T PF14033_consen 364 SWHVEGQL-------NEHIVATALYYYDSENITESRLSFRQQTDDPDLDQELSYEQDDHEWLERVFGIEDGGPAVQELGS 436 (501)
T ss_pred CccccCCc-------ccceeEEEEEEEecCccCCCceEeeeeccCccccccccccccchhHHHHhcCCCCCccceEEcCc
Confidence 68988865 3567889999987532 344666754331 11 001011 0111 12222335
Q ss_pred EecccccEEEEeecCCCCCCCCCCcccCCCC------CcCeEeEEEeeecccccc
Q 026697 186 IKPKMGDALLFWSMKPDASLDPSSLHGGCPV------IKGNKWSSTKWIRVNEYK 234 (235)
Q Consensus 186 V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV------~~G~K~i~~~W~~~~~~~ 234 (235)
|.-+.|++|+|+| ...|++.|- +.|.+-+++-|+=.+.++
T Consensus 437 v~~~~gr~i~fPN---------~~qhrv~~f~L~D~tkpGhrkil~lfLvDP~~~ 482 (501)
T PF14033_consen 437 VETKEGRLIAFPN---------TLQHRVSPFELADPTKPGHRKILALFLVDPHIR 482 (501)
T ss_pred EEccCCcEEeccc---------hhhhccCCccccCCCCCCcEEEEEEEecCCCCc
Confidence 7788999999998 667777754 469888888887655543
No 36
>KOG3959 consensus 2-Oxoglutarate- and iron-dependent dioxygenase-related proteins [General function prediction only]
Probab=86.78 E-value=0.97 Score=37.98 Aligned_cols=95 Identities=23% Similarity=0.322 Sum_probs=53.9
Q ss_pred CCCEEEEcCCCCHHHHHHHHHHhCCCcce-eeEEeC--CCCCccc---cceeeeecccccCCCcHHHHHHHHHHhhccCC
Q 026697 30 EPRAFVYHNFLSKEECEYLINLATPHMRK-STVVDS--DTGKSKD---SRVRTSSGTFLARGRDKIIRDIEKRIADFTFF 103 (235)
Q Consensus 30 ~P~i~~~~~~Ls~~Ec~~li~~~~~~~~~-s~~~~~--~~g~~~~---~~~R~s~~~~l~~~~~~~~~~l~~ri~~~~~~ 103 (235)
-|.+.+++||||.+|=+.|++..+..... |.-... .-|.+++ .+.|+.. +.. .+...+.+.+|+..+.++
T Consensus 71 ~pG~~lie~Fls~~Eea~l~~~~D~~pW~~SQSGRRKQdyGPKvNFkk~Klkt~~--F~G--~P~~~~~v~rrm~~yp~l 146 (306)
T KOG3959|consen 71 IPGLTLIENFLSESEEAKLLNMIDTVPWAQSQSGRRKQDYGPKVNFKKKKLKTDT--FVG--MPEYADMVLRRMSEYPVL 146 (306)
T ss_pred cCCeeehhhhhccchHhHHHHHhccCchhhhcccccccccCCccchhhhhhccCc--ccC--CchHHHHHHHHhhccchh
Confidence 58899999999999999999998754221 110000 0122221 2233332 221 255677788888776533
Q ss_pred CCCC-CCCcEEEecCC--Cceeccccccc
Q 026697 104 PLEN-GEGLQVLHYEA--GQKYEPHFDYF 129 (235)
Q Consensus 104 ~~~~-~e~~~v~rY~~--G~~f~~H~D~~ 129 (235)
.-.. .| .-=+.|.+ |.--.||.|..
T Consensus 147 ~gfqp~E-qCnLeYep~kgsaIdpH~DD~ 174 (306)
T KOG3959|consen 147 KGFQPFE-QCNLEYEPVKGSAIDPHQDDM 174 (306)
T ss_pred hccCcHH-HcCcccccccCCccCccccch
Confidence 2110 11 11234764 78889999964
No 37
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=86.40 E-value=6.3 Score=34.98 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=53.6
Q ss_pred CCcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCc
Q 026697 109 EGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 182 (235)
Q Consensus 109 e~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 182 (235)
..+++.+|.+-. ...+|+|. -.+|+|+- |...|| +.-... ..
T Consensus 190 ~~lrl~~YP~~~~~~~~~g~~~HTD~------------g~lTlL~q--d~~v~G-LQV~~~-----------------g~ 237 (337)
T PLN02639 190 QHMAVNYYPPCPEPELTYGLPAHTDP------------NALTILLQ--DQQVAG-LQVLKD-----------------GK 237 (337)
T ss_pred cEEEEEcCCCCCCcccccCCCCCcCC------------CceEEEEe--cCCcCc-eEeecC-----------------Ce
Confidence 357888888631 24567774 25777643 433345 333211 15
Q ss_pred CeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 183 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 183 ~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
.+.|+|.+|.+||--- ...+| .-..++|++-.....+||++.-+++-
T Consensus 238 Wi~V~p~pg~lVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p 288 (337)
T PLN02639 238 WVAVNPHPGAFVINIGDQLQALSNG-RYKSVWHRAVVNTDKERMSVASFLCP 288 (337)
T ss_pred EEeccCCCCeEEEechhHHHHHhCC-eeeccCcccccCCCCCEEEEEEEecC
Confidence 8999999999888520 01122 23478999964445689998877663
No 38
>PLN02485 oxidoreductase
Probab=86.39 E-value=6.2 Score=34.85 Aligned_cols=48 Identities=10% Similarity=-0.022 Sum_probs=32.6
Q ss_pred cCeeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 182 TGLSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
..+.|+|.+|.+||-- ....+| .-..++|++.+....+||++.-+++-
T Consensus 236 ~Wi~V~p~pg~~vVNiGD~L~~~TnG-~~~St~HRVv~~~~~~R~Si~~F~~p 287 (329)
T PLN02485 236 EWIWAIPIPGTFVCNIGDMLKIWSNG-VYQSTLHRVINNSPKYRVCVAFFYET 287 (329)
T ss_pred cEEECCCCCCcEEEEhHHHHHHHHCC-EeeCCCceecCCCCCCeEEEEEEecC
Confidence 4789999999988751 011122 23578999986655579998877664
No 39
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=86.22 E-value=5 Score=35.75 Aligned_cols=90 Identities=18% Similarity=0.106 Sum_probs=54.3
Q ss_pred CCcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCc
Q 026697 109 EGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 182 (235)
Q Consensus 109 e~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 182 (235)
..+++.+|.+-. ...+|+|. -.+|+|+- | ..|| +...... +..
T Consensus 193 ~~lR~~~YPp~~~~~~~~g~~~HtD~------------g~lTlL~q--d-~v~G-LQV~~~~---------------~g~ 241 (345)
T PLN02750 193 SFARFNHYPPCPAPHLALGVGRHKDG------------GALTVLAQ--D-DVGG-LQISRRS---------------DGE 241 (345)
T ss_pred eEEEEEecCCCCCcccccCcCCCCCC------------CeEEEEec--C-CCCc-eEEeecC---------------CCe
Confidence 468899998621 24567775 35777633 3 2345 4442110 124
Q ss_pred CeeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 183 GLSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 183 ~~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
.+.|+|.+|.+||=- ....+| .-..++|++......+||++.-+++-
T Consensus 242 Wi~V~p~pg~~vVNiGD~L~~~Tng-~~~St~HRVv~~~~~~R~Si~~F~~P 292 (345)
T PLN02750 242 WIPVKPIPDAFIINIGNCMQVWTND-LYWSAEHRVVVNSQKERFSIPFFFFP 292 (345)
T ss_pred EEEccCCCCeEEEEhHHHHHHHhCC-eeecccceeccCCCCCEEEEEEeecC
Confidence 899999999988741 011122 23578999975555679998777654
No 40
>PLN02947 oxidoreductase
Probab=86.02 E-value=5.9 Score=35.79 Aligned_cols=88 Identities=19% Similarity=0.178 Sum_probs=54.0
Q ss_pred CCcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCc
Q 026697 109 EGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 182 (235)
Q Consensus 109 e~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 182 (235)
..+++.+|.+-. ...+|+|. ..+|+|+- ++ .|| +..... ..
T Consensus 225 ~~lrln~YPp~p~~~~~~G~~~HTD~------------g~lTlL~Q-d~--v~G-LQV~~~-----------------g~ 271 (374)
T PLN02947 225 QMMVVNCYPACPEPELTLGMPPHSDY------------GFLTLLLQ-DE--VEG-LQIMHA-----------------GR 271 (374)
T ss_pred eeeeeecCCCCCCcccccCCCCccCC------------CceEEEEe-cC--CCC-eeEeEC-----------------CE
Confidence 357777888631 24467774 36788865 33 345 443221 25
Q ss_pred CeeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 183 GLSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 183 ~~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
.+.|+|.+|.+||-- ....+| .-..++|++......+||.+.-++.-
T Consensus 272 Wi~V~p~pga~VVNvGD~Lq~~SNG-~~kS~~HRVv~~~~~~R~Sia~F~~P 322 (374)
T PLN02947 272 WVTVEPIPGSFVVNVGDHLEIFSNG-RYKSVLHRVRVNSTKPRISVASLHSL 322 (374)
T ss_pred EEeCCCCCCeEEEEeCceeeeeeCC-EEeccccccccCCCCCEEEEEEEecC
Confidence 889999999877742 011122 23578999965555689998877654
No 41
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=84.45 E-value=6.1 Score=35.31 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=54.5
Q ss_pred CcEEEecCCC------ceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G------~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+- -...+|+|. -.+|+| +.|...|| +..... ...
T Consensus 204 ~lRl~~YPp~~~~~~~~g~~~HTD~------------g~lTlL--~qd~~v~G-LQV~~~-----------------g~W 251 (348)
T PLN00417 204 DTRFNMYPPCPRPDKVIGVKPHADG------------SAFTLL--LPDKDVEG-LQFLKD-----------------GKW 251 (348)
T ss_pred eeeeeecCCCCCcccccCCcCccCC------------CceEEE--EecCCCCc-eeEeEC-----------------CeE
Confidence 4889999752 124567775 357766 33433355 444221 148
Q ss_pred eeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+.|+|..|.+||--- ...+| .-..++|++.+...++||++.-+++-
T Consensus 252 i~V~p~pg~lVVNiGD~Le~~Tng-~~kSt~HRVv~~~~~~R~Si~fF~~P 301 (348)
T PLN00417 252 YKAPIVPDTILINVGDQMEIMSNG-IYKSPVHRVVTNREKERISVATFCIP 301 (348)
T ss_pred EECCCCCCcEEEEcChHHHHHhCC-eecccceEEecCCCCCEEEEEEEecC
Confidence 899999999887520 01112 23578999976656789998877664
No 42
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=83.23 E-value=9.7 Score=34.20 Aligned_cols=88 Identities=19% Similarity=0.207 Sum_probs=54.2
Q ss_pred CcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+-. ...+|+|. -.+|+|+. +++ || +.....+ +..
T Consensus 211 ~lRl~~YPp~p~~~~~~G~~~HtD~------------g~lTiL~Q-d~v--~G-LQV~~~~----------------~~W 258 (358)
T PLN02254 211 ALQLNSYPVCPDPDRAMGLAPHTDS------------SLLTILYQ-SNT--SG-LQVFREG----------------VGW 258 (358)
T ss_pred eEEEecCCCCCCcccccCcCCccCC------------CcEEEEec-CCC--CC-ceEECCC----------------CEE
Confidence 57888898621 24567775 36788864 333 45 4432211 147
Q ss_pred eeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+.|+|.+|.+||--- ...+| .-..++|++......+||++.-+++-
T Consensus 259 i~V~p~pgalVVNiGD~lq~~SNg-~~kS~~HRVv~~~~~~R~Sia~F~~P 308 (358)
T PLN02254 259 VTVPPVPGSLVVNVGDLLHILSNG-RFPSVLHRAVVNKTRHRISVAYFYGP 308 (358)
T ss_pred EEcccCCCCEEEEhHHHHHHHhCC-eeccccceeecCCCCCEEEEEEEecC
Confidence 999999999988520 11122 23578999965444578988777653
No 43
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=82.57 E-value=9.5 Score=34.23 Aligned_cols=89 Identities=17% Similarity=0.149 Sum_probs=53.9
Q ss_pred CcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+-. ...+|+|. -.+|+|+- ++ .|| +...... ++..
T Consensus 196 ~lrl~~YP~~~~~~~~~G~~~HTD~------------g~lTlL~Q-d~--v~G-LQV~~~~---------------~~~W 244 (358)
T PLN02515 196 KVVVNYYPKCPQPDLTLGLKRHTDP------------GTITLLLQ-DQ--VGG-LQATRDG---------------GKTW 244 (358)
T ss_pred eEEEeecCCCCChhhccCCCCCCCC------------CeEEEEec-CC--CCc-eEEEECC---------------CCeE
Confidence 47788888621 24567775 36777744 33 344 5542211 0147
Q ss_pred eeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+.|+|..|.+||=- ....+| .-..++|++.....++||++.-+++-
T Consensus 245 i~Vpp~pgalVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~P 294 (358)
T PLN02515 245 ITVQPVEGAFVVNLGDHGHYLSNG-RFKNADHQAVVNSNCSRLSIATFQNP 294 (358)
T ss_pred EECCCCCCeEEEEccHHHHHHhCC-eeeeecceEECCCCCCEEEEEEEecC
Confidence 89999999888742 011222 23578999865556689998877654
No 44
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=81.40 E-value=10 Score=33.61 Aligned_cols=88 Identities=17% Similarity=0.165 Sum_probs=56.1
Q ss_pred CcEEEecCCC------ceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G------~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
-+++.+|.+- -...+|+|. ..+|+|+.=| .-||-=++... ...
T Consensus 177 ~~r~n~Yp~cp~pe~~lGl~~HtD~------------~~lTiLlqd~--~V~GLQv~~~d-----------------g~W 225 (322)
T KOG0143|consen 177 VMRLNYYPPCPEPELTLGLGAHTDK------------SFLTILLQDD--DVGGLQVFTKD-----------------GKW 225 (322)
T ss_pred EEEEeecCCCcCccccccccCccCc------------CceEEEEccC--CcCceEEEecC-----------------CeE
Confidence 6888889863 145678885 3477774444 44665555411 258
Q ss_pred eeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeec
Q 026697 184 LSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 229 (235)
Q Consensus 184 ~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~ 229 (235)
+.|+|.+|..||== ....|| .-...+|++......+|+++-.++.
T Consensus 226 i~V~P~p~a~vVNiGD~l~~lSNG-~ykSv~HRV~~n~~~~R~Sia~F~~ 274 (322)
T KOG0143|consen 226 IDVPPIPGAFVVNIGDMLQILSNG-RYKSVLHRVVVNGEKERISVAFFVF 274 (322)
T ss_pred EECCCCCCCEEEEcccHHhHhhCC-cccceEEEEEeCCCCceEEEEEEec
Confidence 99999997766631 001122 2457899999888778888766554
No 45
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=81.40 E-value=15 Score=32.45 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=54.8
Q ss_pred CcEEEecCCC------ceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G------~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+- ....+|+|. -.+|+| +.|...|| +..... ...
T Consensus 159 ~lRl~~YPp~~~~~~~~G~~~HTD~------------g~lTlL--~qd~~v~G-LQV~~~-----------------g~W 206 (321)
T PLN02299 159 GTKVSNYPPCPKPDLVKGLRAHTDA------------GGIILL--FQDDKVSG-LQLLKD-----------------GEW 206 (321)
T ss_pred eeeeEecCCCCCcccccCccCccCC------------CeEEEE--EecCCCCC-cCcccC-----------------CeE
Confidence 4789999862 124578885 357777 44333345 443211 147
Q ss_pred eeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+.|+|..|.+||--- ...+| .-..+.|++.....++||++.-+++.
T Consensus 207 i~V~p~pg~lvVNiGD~l~~~Tng-~~kS~~HRVv~~~~~~R~Si~~F~~p 256 (321)
T PLN02299 207 VDVPPMRHSIVVNLGDQLEVITNG-KYKSVMHRVVAQTDGNRMSIASFYNP 256 (321)
T ss_pred EECCCCCCeEEEEeCHHHHHHhCC-ceecccceeecCCCCCEEEEEEEecC
Confidence 889999999887520 11122 23578999975556789999887764
No 46
>COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=80.36 E-value=6.4 Score=34.24 Aligned_cols=92 Identities=20% Similarity=0.246 Sum_probs=54.6
Q ss_pred eeccccccccccccccCCCceEEEEEEEecCCC-CCccccC-CCCCCCCCCCCCccccc-cccCcCeeEecccccEEEEe
Q 026697 121 KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVE-EGGETVF-PNAQGNISAVPWWNELS-ECGKTGLSIKPKMGDALLFW 197 (235)
Q Consensus 121 ~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~-~GGeT~F-p~~~~~~~~~~~~~~~~-~c~~~~~~V~P~~G~alvF~ 197 (235)
.-.||.|.... ..+..-...+.+=|-|.. +-|.|.+ |....- +..+.|.+.+ .-....+.|.-.+|+||+|.
T Consensus 132 ~t~~HqD~~~~----~~~~~~lV~~wiAl~d~~~dnGat~vvPgSH~~-~~~~~r~d~~~y~~~~~~pv~lekGDallF~ 206 (299)
T COG5285 132 ATRWHQDYPLV----SPGYPALVNAWIALCDFTEDNGATLVVPGSHKW-DVIPERPDHETYLERNAVPVELEKGDALLFN 206 (299)
T ss_pred ccccccccccc----cCCccceEEEEEeccccccccCceEEEeccccc-ccCCCCCCccchhhhcceeeeecCCCEEEEc
Confidence 45789995432 233445667777788765 5577766 544321 1002221110 00023667888899999994
Q ss_pred ecCCCCCCCCCCcccCCCCCcCeEeEEEe
Q 026697 198 SMKPDASLDPSSLHGGCPVIKGNKWSSTK 226 (235)
Q Consensus 198 n~~~~g~~d~~~~H~g~pV~~G~K~i~~~ 226 (235)
+.++|+....+.+-+-.+..
T Consensus 207 ---------~~L~HaA~aNrT~~~R~A~~ 226 (299)
T COG5285 207 ---------GSLWHAAGANRTSADRVALT 226 (299)
T ss_pred ---------chhhhhhhcCCCCcccceEE
Confidence 69999999998884444433
No 47
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=79.88 E-value=18 Score=32.50 Aligned_cols=87 Identities=15% Similarity=0.111 Sum_probs=53.0
Q ss_pred CcEEEecCCC----c--eeccccccccccccccCCCceEEEEEEEecCC-CCCccccCCCCCCCCCCCCCccccccccCc
Q 026697 110 GLQVLHYEAG----Q--KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDV-EEGGETVFPNAQGNISAVPWWNELSECGKT 182 (235)
Q Consensus 110 ~~~v~rY~~G----~--~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~-~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 182 (235)
.+++.+|.+- . .-.+|+|. -.+|+|+ .|. ..|| +..... ..
T Consensus 212 ~lR~~~YP~~~~~~~~~g~~~HtD~------------g~lTlL~--qd~~~v~G-LQV~~~-----------------g~ 259 (361)
T PLN02758 212 AVRMNYYPPCSRPDLVLGLSPHSDG------------SALTVLQ--QGKGSCVG-LQILKD-----------------NT 259 (361)
T ss_pred eeeeecCCCCCCcccccCccCccCC------------ceeEEEE--eCCCCCCC-eeeeeC-----------------CE
Confidence 5778888752 1 23467775 3677774 342 3455 444221 14
Q ss_pred CeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeec
Q 026697 183 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 229 (235)
Q Consensus 183 ~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~ 229 (235)
.+.|+|..|.+||--- ...+| .-..+.|++......+||.+.-+++
T Consensus 260 Wi~V~p~pgalVVNiGD~L~~~SNG-~~kS~~HRVv~~~~~~R~Sia~F~~ 309 (361)
T PLN02758 260 WVPVHPVPNALVINIGDTLEVLTNG-KYKSVEHRAVTNKEKDRLSIVTFYA 309 (361)
T ss_pred EEeCCCCCCeEEEEccchhhhhcCC-eeecccceeecCCCCCEEEEEEEec
Confidence 7899999999887521 11122 2357899997554557898877765
No 48
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=79.77 E-value=11 Score=32.89 Aligned_cols=47 Identities=11% Similarity=-0.038 Sum_probs=32.1
Q ss_pred cCeeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeec
Q 026697 182 TGLSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 229 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~ 229 (235)
..+.|+|.+|.+||-- ....+| .-..++|++......+||++.-++.
T Consensus 198 ~Wi~V~p~pga~vVNiGD~l~~~TNG-~~~St~HRVv~~~~~~R~Si~~F~~ 248 (300)
T PLN02365 198 EFVPVDPLPGTLLVNLGDVATAWSNG-RLCNVKHRVQCKEATMRISIASFLL 248 (300)
T ss_pred eEEecCCCCCeEEEEhhHHHHHHhCC-ceecccceeEcCCCCCEEEEEEEec
Confidence 4789999999988852 011122 2357899997655557999887764
No 49
>PLN02276 gibberellin 20-oxidase
Probab=79.22 E-value=19 Score=32.26 Aligned_cols=88 Identities=19% Similarity=0.167 Sum_probs=54.5
Q ss_pred CCcEEEecCCCc------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCc
Q 026697 109 EGLQVLHYEAGQ------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 182 (235)
Q Consensus 109 e~~~v~rY~~G~------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 182 (235)
..+++.+|.+-. .-.+|+|. -.+|+|+- | ..|| +.-... ..
T Consensus 206 ~~lrl~~YP~~~~~~~~~g~~~HTD~------------g~lTlL~Q--d-~v~G-LQV~~~-----------------g~ 252 (361)
T PLN02276 206 SIMRCNYYPPCQEPELTLGTGPHCDP------------TSLTILHQ--D-QVGG-LQVFVD-----------------NK 252 (361)
T ss_pred ceeeeEeCCCCCCcccccCCccccCC------------ceeEEEEe--c-CCCc-eEEEEC-----------------CE
Confidence 458888897631 23467774 36777753 3 2345 443221 25
Q ss_pred CeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 183 GLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 183 ~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
.+.|+|..|.+||--- ...+| .-..++|++......+||++.-+++-
T Consensus 253 Wi~V~p~pgalVVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~P 303 (361)
T PLN02276 253 WRSVRPRPGALVVNIGDTFMALSNG-RYKSCLHRAVVNSERERRSLAFFLCP 303 (361)
T ss_pred EEEcCCCCCeEEEEcHHHHHHHhCC-ccccccceeecCCCCCEEEEEEEecC
Confidence 8999999999988621 11122 23578999865445689998877763
No 50
>PHA02985 hypothetical protein; Provisional
Probab=79.05 E-value=16 Score=31.28 Aligned_cols=106 Identities=16% Similarity=0.199 Sum_probs=75.1
Q ss_pred cHHHHHHHHHHhhccCCCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCC
Q 026697 87 DKIIRDIEKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGN 166 (235)
Q Consensus 87 ~~~~~~l~~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~ 166 (235)
..+++.+++++.+-.. ..+.+++..|+.|+.|.. . ...+...+++=+..+..||..+-.+...
T Consensus 39 ~~I~~EI~~~i~E~V~----~~n~i~i~~f~~~~~~~~-~-----------~~~~~SkilICiqsAkkGG~iIi~~~~~- 101 (271)
T PHA02985 39 KIILDEIEQYIDETVL----VKNLISIEVFNKKKKYYQ-N-----------IPSRLSKIIICIQSAKKGGCIIIINNIT- 101 (271)
T ss_pred hHHHHHHHHhcCCeEE----ecceeEEEEEcCCcceEe-e-----------CCCCceeEEEEEeecccCCEEEEecccc-
Confidence 4567777777754322 356789998888865422 1 2236778888899999999888744221
Q ss_pred CCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeecccc
Q 026697 167 ISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNE 232 (235)
Q Consensus 167 ~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~~ 232 (235)
...-.++|..|.||+-. |.+-..+.+|.+|.-.++..=+..+.
T Consensus 102 --------------~~K~ii~~~~n~aVlLS---------PLs~Y~Vs~V~kGsli~i~l~idIPS 144 (271)
T PHA02985 102 --------------NNKKIITLNINHIIILS---------PLSKYTVSKVSKGSLIIIVLDIDIPS 144 (271)
T ss_pred --------------cCceEEecCCCeEEEec---------chhhceEEEecCCcEEEEEEEecCCc
Confidence 14577999999999985 57778889999998777776655554
No 51
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=78.77 E-value=19 Score=31.47 Aligned_cols=48 Identities=15% Similarity=0.131 Sum_probs=31.3
Q ss_pred cCeeEecccc-cEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 182 TGLSIKPKMG-DALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 182 ~~~~V~P~~G-~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
..+.|+|.+| ..||-- ....+| .-..++|++.....++||++.-+++.
T Consensus 200 ~Wi~V~p~p~~~lvVNvGD~L~~~Tng-~~~S~~HRVv~~~~~~R~Si~~F~~p 252 (303)
T PLN02403 200 KWVPIPPSKNNTIFVNTGDQLEVLSNG-RYKSTLHRVMADKNGSRLSIATFYNP 252 (303)
T ss_pred eEEECCCCCCCEEEEEehHHHHHHhCC-eeecccceeecCCCCCEEEEEEEEcC
Confidence 4788999996 454431 001122 23578999986667789999877764
No 52
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=78.24 E-value=15 Score=32.77 Aligned_cols=88 Identities=16% Similarity=0.137 Sum_probs=54.1
Q ss_pred CCcEEEecCCC------ceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCc
Q 026697 109 EGLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKT 182 (235)
Q Consensus 109 e~~~v~rY~~G------~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~ 182 (235)
..+++.+|.+- -.-.+|+|. -.+|+|+- | ..|| +..... ..
T Consensus 197 ~~lrl~~YPp~~~~~~~~G~~~HtD~------------g~lTlL~Q--d-~v~G-LQV~~~-----------------g~ 243 (348)
T PLN02912 197 QHMAINYYPPCPQPELTYGLPGHKDA------------NLITVLLQ--D-EVSG-LQVFKD-----------------GK 243 (348)
T ss_pred ceeeeeecCCCCChhhcCCcCCCcCC------------CceEEEEE--C-CCCc-eEEEEC-----------------Cc
Confidence 35888999862 124467775 35777744 4 2345 443221 25
Q ss_pred CeeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 183 GLSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 183 ~~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
.+.|+|..|.+||-- ....+| .-..++|++.....++||++.-+++-
T Consensus 244 Wi~V~p~pgalvVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Sia~F~~p 294 (348)
T PLN02912 244 WIAVNPIPNTFIVNLGDQMQVISND-KYKSVLHRAVVNTDKERISIPTFYCP 294 (348)
T ss_pred EEECCCcCCeEEEEcCHHHHHHhCC-EEEcccccccCCCCCCEEEEEEEecC
Confidence 899999999988751 011122 23578999965445689998877764
No 53
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=77.11 E-value=22 Score=31.97 Aligned_cols=48 Identities=13% Similarity=0.028 Sum_probs=31.8
Q ss_pred cCeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 182 TGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
..+.|+|.+|.+||--- ...+| .-..++|++......+||++.-+++-
T Consensus 260 ~W~~V~p~pgalVVNiGD~l~~~Tng-~~kSt~HRVv~~~~~~R~SiafF~~P 311 (362)
T PLN02393 260 AWITVKPVPDAFIVNIGDQIQVLSNA-IYKSVEHRVIVNSAKERVSLAFFYNP 311 (362)
T ss_pred EEEECCCCCCeEEEEcchhhHhhcCC-eeeccceecccCCCCCEEEEEEEecC
Confidence 47899999999887520 11112 22578999964444579998877664
No 54
>KOG4176 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.99 E-value=53 Score=29.14 Aligned_cols=179 Identities=17% Similarity=0.160 Sum_probs=94.5
Q ss_pred eEEEEEcCCCC-EEEEcCCCCHHHHHHHHHHhCCCcceeeEEeCCCCCc----cccceeeee-ccc--ccCCCcHHHHHH
Q 026697 22 QWVEVISWEPR-AFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKS----KDSRVRTSS-GTF--LARGRDKIIRDI 93 (235)
Q Consensus 22 ~~~e~ls~~P~-i~~~~~~Ls~~Ec~~li~~~~~~~~~s~~~~~~~g~~----~~~~~R~s~-~~~--l~~~~~~~~~~l 93 (235)
.++...-..|. +.++.+++++.+-+-++........-. ...++.... ..-.++++. .-+ ++. -+.+.+.+
T Consensus 118 ~~l~~~~~~~~e~~~~~d~V~el~e~~l~~~~~~e~~~~-~~~gk~R~~iq~G~~f~y~~~~~d~~~~~~p-iPs~~~~i 195 (323)
T KOG4176|consen 118 LKLRDEVFIPGELSLIVDFVTELEEKGLIGALVDETFTY-QESGKHREVIQLGYPFDYRTNNVDESKPVDP-IPSLFKSI 195 (323)
T ss_pred heeeccccChhhceehhhhhhhhHHhhhhccccccccee-eccccceeeeecCceeccCCCcccccCccCC-CchHHHHH
Confidence 33433334444 778888888887777776654321111 000110000 011111110 000 111 14567777
Q ss_pred HHHHhhccCCCCCCCCCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCC--CccccCCCCCCCCCCCC
Q 026697 94 EKRIADFTFFPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEE--GGETVFPNAQGNISAVP 171 (235)
Q Consensus 94 ~~ri~~~~~~~~~~~e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~--GGeT~Fp~~~~~~~~~~ 171 (235)
.+|+-..-.+|. ..+.+-+..|++|+.-.+|.|... ..+.+. .+.+|+++-. |=....-....
T Consensus 196 i~rlv~~~~ip~-~pd~~~iN~Ye~G~~i~ph~~~~~-------F~~Pi~-slS~lSe~~m~Fg~~~~~~~~~~------ 260 (323)
T KOG4176|consen 196 IDRLVSWRVIPE-RPDQCTINFYEPGDGIPPHIDHSA-------FLDPIS-SLSFLSECTMEFGHGLLSDNIGN------ 260 (323)
T ss_pred HHHhhhhccCCC-CCCeeEEEeeCCCCCCCCCCChHH-------hcCceE-EEEeecceeEEecccccccCccc------
Confidence 777777666666 456788999999999999996532 233333 4445776521 11111111100
Q ss_pred CccccccccCc-CeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeeccccc
Q 026697 172 WWNELSECGKT-GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEY 233 (235)
Q Consensus 172 ~~~~~~~c~~~-~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~~~ 233 (235)
-. -+++.-+.|++++-.+. .-....|+++|+. +|.|..++.+..+.
T Consensus 261 ---------~~g~~s~p~~~g~~lvi~~~-----~ad~~~~~~~~~~--~kRisitfrki~~~ 307 (323)
T KOG4176|consen 261 ---------FRGSLSLPLRYGSVLVIRGR-----SADVAPHCIRPSR--NKRISITFRKIRPD 307 (323)
T ss_pred ---------cccccccccccCeEEEeCCC-----cccccccccCCCC--CceEEEEEEEeccC
Confidence 01 36777788998888642 1236678888843 46666667665543
No 55
>PLN02997 flavonol synthase
Probab=74.99 E-value=11 Score=33.33 Aligned_cols=87 Identities=13% Similarity=0.035 Sum_probs=53.6
Q ss_pred CcEEEecCCC------ceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAG------QKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G------~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+- -...+|+|. -.+|+|+. ++ .|| +..... ...
T Consensus 184 ~lRl~~YP~~~~~~~~~g~~~HTD~------------g~lTlL~Q-d~--v~G-LQV~~~-----------------g~W 230 (325)
T PLN02997 184 VLRVNFYPPTQDTELVIGAAAHSDM------------GAIALLIP-NE--VPG-LQAFKD-----------------EQW 230 (325)
T ss_pred eeeeecCCCCCCcccccCccCccCC------------CceEEEec-CC--CCC-EEEeEC-----------------CcE
Confidence 4888999863 124577775 36777743 33 355 443221 248
Q ss_pred eeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 184 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 184 ~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
+.|+|.+|.+||--- ...+| .-..++|++......+||.+.-+++-
T Consensus 231 i~V~p~pgalvVNiGD~Le~~TNG-~~kSt~HRVv~~~~~~R~Si~fF~~P 280 (325)
T PLN02997 231 LDLNYINSAVVVIIGDQLMRMTNG-RFKNVLHRAKTDKERLRISWPVFVAP 280 (325)
T ss_pred EECCCCCCeEEEEechHHHHHhCC-ccccccceeeCCCCCCEEEEEEEecC
Confidence 899999998887521 11122 23578999975545579988777654
No 56
>PTZ00273 oxidase reductase; Provisional
Probab=73.25 E-value=46 Score=29.19 Aligned_cols=47 Identities=13% Similarity=0.082 Sum_probs=31.4
Q ss_pred cCeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 182 TGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
..+.|+|..|.+||--- ...+| .-..++|++... ..+||++.-+++-
T Consensus 225 ~Wi~V~p~pg~lvVNvGD~l~~~TnG-~~kSt~HRVv~~-~~~R~Si~~F~~p 275 (320)
T PTZ00273 225 EWMDVPPLEGSFVVNIGDMMEMWSNG-RYRSTPHRVVNT-GVERYSMPFFCEP 275 (320)
T ss_pred CEEeCCCCCCeEEEEHHHHHHHHHCC-eeeCCCccccCC-CCCeEEEEEEEcC
Confidence 47899999999887520 11122 235789999743 4579988777654
No 57
>PF02668 TauD: Taurine catabolism dioxygenase TauD, TfdA family; InterPro: IPR003819 This family consists of TauD/TfdA taurine catabolism dioxygenases. The Escherichia coli tauD gene is required for the utilization of taurine (2-aminoethanesulphonic acid) as a sulphur source and is expressed only under conditions of sulphate starvation. TauD is an alpha-ketoglutarate-dependent dioxygenase catalyzing the oxygenolytic release of sulphite from taurine []. The 2,4-dichlorophenoxyacetic acid/alpha-ketoglutarate dioxygenase from Burkholderia sp. (strain RASC) also belongs to this family []. TfdA from Ralstonia eutropha (Alcaligenes eutrophus) is a 2,4-D monooxygenase [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3SWT_B 3R1J_A 1GVG_A 1DRT_A 1DS1_A 1DS0_A 1DRY_A 3V15_A 3PVJ_D 3V17_A ....
Probab=73.06 E-value=3.5 Score=34.32 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=29.2
Q ss_pred cCeeEecccccEEEEeecCCCCCCCCCCcccCCCC--CcCeEeEEEee
Q 026697 182 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPV--IKGNKWSSTKW 227 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV--~~G~K~i~~~W 227 (235)
..+.+.-++|++|||.| .+++|+-.+. ..|.|+..+.|
T Consensus 219 ~~~~~~~~~GDlli~dN--------~~~lHgR~~~~~~~~~R~L~R~~ 258 (258)
T PF02668_consen 219 YTYRHRWQPGDLLIWDN--------HRVLHGRTAFDDPDGDRHLLRVW 258 (258)
T ss_dssp GEEEEE--TTEEEEEET--------TTEEEEE--E-STTSSEEEEEEE
T ss_pred hcccccCCCceEEEEcC--------CeeEecCCCCCCCCCCEEEEEeC
Confidence 45667788999999998 6999999988 67899999988
No 58
>KOG4459 consensus Membrane-associated proteoglycan Leprecan [Function unknown]
Probab=72.45 E-value=0.66 Score=42.49 Aligned_cols=72 Identities=28% Similarity=0.352 Sum_probs=54.1
Q ss_pred CceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCc
Q 026697 139 GQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 218 (235)
Q Consensus 139 ~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~ 218 (235)
+-+.....+|+||+++||+..|...+..+ ....++|+.|+.+-|.+- -...|...+|++
T Consensus 364 ~~~~~~a~~~~~dd~~~~el~~t~~d~~t--------------~~a~~k~~~~re~~~~~g-------~e~~~~~~~~~k 422 (471)
T KOG4459|consen 364 TELDYFALLYLNDDFEGGELLFTEPDAKT--------------YTAISKPECGRECAFSSG-------AENPHGVKAVTK 422 (471)
T ss_pred HHHHhhccHhhcCccccccceecCCcccc--------------hhhccccccccchhhhcc-------ccCccchhhhhh
Confidence 45778899999999999999996543211 356789999999999752 245688999999
Q ss_pred CeEeEEEeeeccc
Q 026697 219 GNKWSSTKWIRVN 231 (235)
Q Consensus 219 G~K~i~~~W~~~~ 231 (235)
|.+--+--|....
T Consensus 423 g~e~~~~lw~~~~ 435 (471)
T KOG4459|consen 423 GLECAVALWPTLA 435 (471)
T ss_pred hhHHhhhcCcccC
Confidence 8777666776554
No 59
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=70.33 E-value=47 Score=29.52 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=54.4
Q ss_pred CcEEEecCCCc--------eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccC
Q 026697 110 GLQVLHYEAGQ--------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGK 181 (235)
Q Consensus 110 ~~~v~rY~~G~--------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~ 181 (235)
.+++.+|.+-. .-.+|+|. -.+|+|+- ++ .|| +.-... +.
T Consensus 179 ~lRl~~YP~~~~~~~~~~~g~~~HTD~------------g~lTlL~Q-d~--v~G-LQV~~~----------------~g 226 (335)
T PLN02156 179 CLRMNHYPEKEETPEKVEIGFGEHTDP------------QLISLLRS-ND--TAG-LQICVK----------------DG 226 (335)
T ss_pred eEeEEeCCCCCCCccccccCCCCccCC------------CceEEEEe-CC--CCc-eEEEeC----------------CC
Confidence 58899997632 12457774 36777744 33 345 443211 12
Q ss_pred cCeeEecccccEEEEe----ecCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 182 TGLSIKPKMGDALLFW----SMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~----n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
..+.|+|..|.+||-- ....+| .-..+.|++......+||++.-+++-
T Consensus 227 ~Wi~Vpp~pga~VVNiGD~l~~wTNg-~~kSt~HRVv~~~~~~R~SiafF~~P 278 (335)
T PLN02156 227 TWVDVPPDHSSFFVLVGDTLQVMTNG-RFKSVKHRVVTNTKRSRISMIYFAGP 278 (335)
T ss_pred CEEEccCCCCcEEEEhHHHHHHHhCC-eeeccceeeecCCCCCEEEEEEeecC
Confidence 5899999999988852 111222 23588999986656679998877653
No 60
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=70.12 E-value=33 Score=30.26 Aligned_cols=89 Identities=21% Similarity=0.255 Sum_probs=56.8
Q ss_pred CCCCcEEEecCC------CceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCcccccccc
Q 026697 107 NGEGLQVLHYEA------GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECG 180 (235)
Q Consensus 107 ~~e~~~v~rY~~------G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~ 180 (235)
.++.++++||.. ++.-+.|.|+. .+|+| +.| ..||=-+.+..
T Consensus 172 ~~~~~RLlrYP~~~~~~~~~~~GaHtD~G------------~lTLl--~Qd-~~~GLqv~~~~----------------- 219 (322)
T COG3491 172 PNSVLRLLRYPSRPAREGADGVGAHTDYG------------LLTLL--FQD-DVGGLEVRPPN----------------- 219 (322)
T ss_pred chheEEEEecCCCcccccccccccccCCC------------eEEEE--Eec-ccCCeEEecCC-----------------
Confidence 356899999994 33446788853 34544 333 45664455542
Q ss_pred CcCeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeee
Q 026697 181 KTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWI 228 (235)
Q Consensus 181 ~~~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~ 228 (235)
...+.|.|..|..||..- ...+ ..-..+.|+++-...=+||++--++
T Consensus 220 g~Wl~v~P~pgtlvVNiGdmLe~~Tn-g~lrST~HRV~~~~~~~R~SipfF~ 270 (322)
T COG3491 220 GGWLDVPPIPGTLVVNIGDMLERWTN-GRLRSTVHRVRNPPGVDRYSIPFFL 270 (322)
T ss_pred CCeeECCCCCCeEEEeHHHHHHHHhC-CeeccccceeecCCCccceeeeeec
Confidence 258999999999999741 1112 2346889999877533788875443
No 61
>PF10014 2OG-Fe_Oxy_2: 2OG-Fe dioxygenase; InterPro: IPR018724 Members of this family of hypothetical bacterial proteins have no known function. Some are described as putative biofilm formation or putative agglutination proteins. ; PDB: 3PL0_B.
Probab=70.03 E-value=3.3 Score=33.88 Aligned_cols=56 Identities=21% Similarity=0.182 Sum_probs=32.3
Q ss_pred ceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCc
Q 026697 140 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 218 (235)
Q Consensus 140 ~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~ 218 (235)
.-..+.++--+++ +||+|.....+.. .......-..|..+++. |..++|.+.||..
T Consensus 124 d~v~~~li~r~Ni-~GG~s~i~~~~~~--------------~~~~~~l~~p~d~l~~~--------D~~~~H~vtpI~~ 179 (195)
T PF10014_consen 124 DFVFIHLINRHNI-EGGESQIYDNDKE--------------ILFFFTLLEPGDTLLVD--------DRRVWHYVTPIRP 179 (195)
T ss_dssp SEEEEEEEEEESE-EE--EEEEETTSS--------------EEEEE---STTEEEEEE--------TTTEEEEE--EEE
T ss_pred CEEEEEEEcCCCc-cCceEEEEeCCCC--------------cceEEEecCCCCEEEEe--------CCcceECCCceec
Confidence 3566666666666 7888887543211 01223344679988884 6799999999985
No 62
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=66.19 E-value=32 Score=30.82 Aligned_cols=88 Identities=14% Similarity=0.050 Sum_probs=53.7
Q ss_pred CcEEEecCCC----c--eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcC
Q 026697 110 GLQVLHYEAG----Q--KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTG 183 (235)
Q Consensus 110 ~~~v~rY~~G----~--~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~ 183 (235)
.+++.+|.+- . .-.+|+|. -.+|+|+. | ..|| +..... ...
T Consensus 212 ~lrl~~YP~~~~~~~~~g~~~HTD~------------g~lTlL~q--d-~v~G-LQV~~~-----------------g~W 258 (360)
T PLN03178 212 QMKINYYPRCPQPDLALGVEAHTDV------------SALTFILH--N-MVPG-LQVLYE-----------------GKW 258 (360)
T ss_pred hhheeccCCCCCCccccCcCCccCC------------CceEEEee--C-CCCc-eeEeEC-----------------CEE
Confidence 4788889752 1 24577775 35777743 3 2344 554321 258
Q ss_pred eeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeeccc
Q 026697 184 LSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVN 231 (235)
Q Consensus 184 ~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~ 231 (235)
+.|+|.+|.+||--- ...+| .-..++|++......+||++.-+++-+
T Consensus 259 i~V~p~pg~lvVNiGD~L~~~TNG-~~kSt~HRVv~~~~~~R~Si~~F~~P~ 309 (360)
T PLN03178 259 VTAKCVPDSIVVHIGDTLEILSNG-RYKSILHRGLVNKEKVRISWAVFCEPP 309 (360)
T ss_pred EEcCCCCCeEEEEccHHHHHHhCC-ccccccceeecCCCCCeEEEEEEecCC
Confidence 999999999877410 01122 235789998544455799998877654
No 63
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=65.52 E-value=9.9 Score=32.13 Aligned_cols=41 Identities=27% Similarity=0.514 Sum_probs=33.5
Q ss_pred cCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCc---CeEeEEEeeecc
Q 026697 182 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK---GNKWSSTKWIRV 230 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~---G~K~i~~~W~~~ 230 (235)
..+.++-++|++|+|.| .+++|+-.+-.. +.||..+.|+..
T Consensus 218 ~~~~~~l~~Gdivi~DN--------~r~lHgR~~f~~~~~~~R~L~r~~i~~ 261 (262)
T cd00250 218 NQLTVKLEPGDLLIFDN--------RRVLHGRTAFSPRYGGDRWLKGCYVDR 261 (262)
T ss_pred hEEEEEcCCCCEEEEec--------hhhhcCCCCCCCCCCCceEEEEEEecC
Confidence 45678889999999988 689999887654 579999999863
No 64
>PLN02704 flavonol synthase
Probab=64.46 E-value=31 Score=30.60 Aligned_cols=48 Identities=10% Similarity=0.030 Sum_probs=32.5
Q ss_pred cCeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 182 TGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
..+.|+|.+|.+||--- ...+| .-..++|++......+||++.-+++-
T Consensus 245 ~Wi~V~p~pg~lvVNvGD~L~~~TNg-~~kSt~HRVv~~~~~~R~Si~~F~~p 296 (335)
T PLN02704 245 HWFDVKYIPNALVIHIGDQIEILSNG-KYKSVLHRTTVNKEKTRMSWPVFLEP 296 (335)
T ss_pred EEEeCCCCCCeEEEEechHHHHHhCC-eeecccceeecCCCCCeEEEEEEecC
Confidence 48899999998877520 11112 23578999975545679998877664
No 65
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=62.10 E-value=60 Score=28.72 Aligned_cols=91 Identities=16% Similarity=0.198 Sum_probs=52.8
Q ss_pred CCcEEEecCCCc-------eeccccccccccccccCCCceEEEEEEEecCCCCCccccC-CCCCCCCCCCCCcccccccc
Q 026697 109 EGLQVLHYEAGQ-------KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVF-PNAQGNISAVPWWNELSECG 180 (235)
Q Consensus 109 e~~~v~rY~~G~-------~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~F-p~~~~~~~~~~~~~~~~~c~ 180 (235)
..+++.+|.+-. ...+|+|. -.+|+|+ .| ..|| +.- ..... ++
T Consensus 182 ~~lrl~~YP~~~~~~~~~~g~~~HTD~------------g~lTlL~--qd-~v~G-LQV~~~~~~-------------~~ 232 (332)
T PLN03002 182 ATMRLLRYQGISDPSKGIYACGAHSDF------------GMMTLLA--TD-GVMG-LQICKDKNA-------------MP 232 (332)
T ss_pred hheeeeeCCCCCCcccCccccccccCC------------CeEEEEe--eC-CCCc-eEEecCCCC-------------CC
Confidence 357899998631 23567774 3678884 33 2355 443 22100 01
Q ss_pred CcCeeEecccccEEEEee----cCCCCCCCCCCcccCCCCCcCeEeEEEeeecc
Q 026697 181 KTGLSIKPKMGDALLFWS----MKPDASLDPSSLHGGCPVIKGNKWSSTKWIRV 230 (235)
Q Consensus 181 ~~~~~V~P~~G~alvF~n----~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~ 230 (235)
...+.|+|..|.+||--- ...+| .-..++|++... ..+||++.-+++-
T Consensus 233 g~Wi~Vpp~pg~~VVNiGD~L~~wTng-~~kSt~HRVv~~-~~~R~Sia~F~~p 284 (332)
T PLN03002 233 QKWEYVPPIKGAFIVNLGDMLERWSNG-FFKSTLHRVLGN-GQERYSIPFFVEP 284 (332)
T ss_pred CcEEECCCCCCeEEEEHHHHHHHHhCC-eeECcCCeecCC-CCCeeEEEEEecC
Confidence 247889999999888520 11112 234789999643 4578988776653
No 66
>COG4340 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.61 E-value=8.2 Score=31.40 Aligned_cols=43 Identities=30% Similarity=0.495 Sum_probs=27.5
Q ss_pred CCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCc
Q 026697 154 EGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIK 218 (235)
Q Consensus 154 ~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~ 218 (235)
.||||..+..+- ++.+..---..|.+++-. |++.+|.+||+..
T Consensus 159 ~gGet~lY~~~~--------------~~p~f~kvl~pGe~~~l~--------Dh~~~H~~tpi~p 201 (226)
T COG4340 159 DGGETDLYAPDG--------------ASPGFFKVLAPGEAVFLD--------DHRVLHGVTPIVP 201 (226)
T ss_pred cCceEEEEccCC--------------CCcceEEeccCCcEEEec--------cchhcccccceec
Confidence 799999876421 011222233457766552 6899999999875
No 67
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A ....
Probab=50.85 E-value=30 Score=28.37 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=29.9
Q ss_pred cCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC-eEeEEEeeeccc
Q 026697 182 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWIRVN 231 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G-~K~i~~~W~~~~ 231 (235)
..+.+.-++|++|+.+. ..+|.+.-...+ .-..+|.|++..
T Consensus 207 ~~~~~~l~pGD~LfiP~---------gWwH~V~~~~~~~~sisvn~w~~~~ 248 (251)
T PF13621_consen 207 PPYEVVLEPGDVLFIPP---------GWWHQVENLSDDDLSISVNYWFRTP 248 (251)
T ss_dssp -EEEEEEETT-EEEE-T---------T-EEEEEESTTSSCEEEEEEEEESS
T ss_pred ceeEEEECCCeEEEECC---------CCeEEEEEcCCCCeEEEEEEEeccc
Confidence 46788888999999984 889999887333 478999999764
No 68
>KOG1971 consensus Lysyl hydroxylase [Posttranslational modification, protein turnover, chaperones]
Probab=42.33 E-value=21 Score=32.56 Aligned_cols=76 Identities=22% Similarity=0.376 Sum_probs=49.0
Q ss_pred CceEEEEEEEecCCCCCccccCCCCCCCCCCC--CCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCC
Q 026697 139 GQRMATVLMYLSDVEEGGETVFPNAQGNISAV--PWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPV 216 (235)
Q Consensus 139 ~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~--~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV 216 (235)
..|..|+.+||.+..+||+..|-......... .-|..+.+| =..|.+++.++ .+.|...+-
T Consensus 280 ~~~e~~l~v~l~nq~~gG~L~~~~~~~~~h~~~~~~~EiFdn~--------h~p~qa~LHrg---------~~~~~a~~~ 342 (415)
T KOG1971|consen 280 DAREVGLFVCLSNQFEGGELLFTGKYCTKHLRTDDLWEIFDNS--------HDPGQAYLHRG---------YHKHGARAT 342 (415)
T ss_pred chhhcceeEEecccccCCeeEeeccccccccCCCchhhhccCc--------CCCccceecCc---------chhcccccc
Confidence 46899999999999999999998754322111 112222222 23467777765 566666776
Q ss_pred CcCeEeEEEeeeccc
Q 026697 217 IKGNKWSSTKWIRVN 231 (235)
Q Consensus 217 ~~G~K~i~~~W~~~~ 231 (235)
..|..+.-..|+...
T Consensus 343 ~~~~~~~nv~~~~~~ 357 (415)
T KOG1971|consen 343 IVGQPCPNVYWFPIS 357 (415)
T ss_pred CCCCCCCceeeehhH
Confidence 677766666776543
No 69
>PF05118 Asp_Arg_Hydrox: Aspartyl/Asparaginyl beta-hydroxylase; InterPro: IPR007803 The alpha-ketoglutarate-dependent dioxygenase aspartyl (asparaginyl) beta-hydroxylase (1.14.11.16 from EC) specifically hydroxylates one aspartic or asparagine residue in certain epidermal growth factor-like domains of a number of proteins. Its action may be due to histidine-675, which, when mutated to an alanine residue, causes the loss of enzymatic activity in the protein []. An invertebrate alpha-ketoglutarate-dependent aspartyl/asparaginyl beta-hydroxylase, which posttranslationally hydroxylates specific aspartyl or asparaginyl residues within epidermal growth factor-like modules [], activity was found to be similar to that of the purified mammalian aspartyl/asparaginyl beta-hydroxylase with respect to cofactor requirements, stereochemistry and substrate sequence specificity []. This enzyme requires Fe2+ as a cofactor. Some vitamin K-dependent coagulation factors, as well as synthetic peptides based on the structure of the first epidermal growth factor domain of human coagulation factor IX or X, can act as acceptors.; GO: 0018193 peptidyl-amino acid modification, 0030176 integral to endoplasmic reticulum membrane; PDB: 3RCQ_A 1E5S_A 1E5R_B.
Probab=41.93 E-value=93 Score=24.41 Aligned_cols=78 Identities=14% Similarity=0.018 Sum_probs=45.2
Q ss_pred CCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEec
Q 026697 109 EGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKP 188 (235)
Q Consensus 109 e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P 188 (235)
....+.+-.+|....+|+|.... .+++.+=|..+.+|. .|.. .+..+.=
T Consensus 80 ~~~~~s~l~pg~~I~pH~d~~~~----------~lR~Hl~L~~p~~~~--~~~v-------------------~~~~~~w 128 (163)
T PF05118_consen 80 GRVRFSRLPPGTHIKPHRDPTNL----------RLRLHLPLIVPNPGC--YIRV-------------------GGETRHW 128 (163)
T ss_dssp EEEEEEEEECTEEEEEE-SS-TT----------EEEEEEEEC--STTE--EEEE-------------------TTEEEB-
T ss_pred hhEEEEEECCCCEECCeeCCCCc----------ceEEEEEEEcCCCCe--EEEE-------------------CCeEEEe
Confidence 45788888999999999996431 266666665441221 2221 1445666
Q ss_pred ccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEe
Q 026697 189 KMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTK 226 (235)
Q Consensus 189 ~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~ 226 (235)
+.|.+++|. ....|++---....|.++..
T Consensus 129 ~~G~~~~fD---------~s~~H~~~N~~~~~Rv~L~v 157 (163)
T PF05118_consen 129 REGECWVFD---------DSFEHEVWNNGDEDRVVLIV 157 (163)
T ss_dssp -CTEEEEE----------TTS-EEEEESSSS-EEEEEE
T ss_pred ccCcEEEEe---------CCEEEEEEeCCCCCEEEEEE
Confidence 789999994 57888876655667776653
No 70
>PRK09965 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional
Probab=41.86 E-value=41 Score=24.25 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=31.4
Q ss_pred EEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 144 TVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 144 T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
+.+.-++|..+|+...|... ..+.|.-..|..-.|.| ...|.++|+..|
T Consensus 4 ~~v~~~~~l~~g~~~~~~~~------------------~~i~v~~~~g~~~A~~~---------~CpH~g~~L~~G 52 (106)
T PRK09965 4 IYACPVADLPEGEALRVDTS------------------PVIALFNVGGEFYAIDD---------RCSHGNASLSEG 52 (106)
T ss_pred EEeeeHHHcCCCCeEEEeCC------------------CeEEEEEECCEEEEEeC---------cCCCCCCCCCce
Confidence 34556777777776666531 13445455777777765 788888888544
No 71
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=40.91 E-value=20 Score=30.71 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=22.7
Q ss_pred ccccccccccccccCCCceEEEEEEEecCCCCCccccCCC
Q 026697 123 EPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 162 (235)
Q Consensus 123 ~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~ 162 (235)
.||.|..... ..-.+++|.-+.-+.+||+|.|-+
T Consensus 95 ~wHtD~sy~~------~pp~~~~L~~~~~p~~GG~T~fad 128 (277)
T PRK09553 95 NWHTDVTFIE------TPPLGAILAAKQLPSTGGDTLWAS 128 (277)
T ss_pred CCeecccCee------CCCceeEEEEEecCCCCCccHhhh
Confidence 5999987542 112356665566667999999943
No 72
>cd03528 Rieske_RO_ferredoxin Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO). The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms. These enzymes enable microorganisms to tolerate and even exclusively utilize aromatic compounds for growth. ROs consist of two or three components: reductase, oxygenase, and ferredoxin (in some cases) components. The ferredoxin component contains either a plant-type or Rieske-type [2Fe-2S] cluster. The Rieske ferredoxin component in this family carries an electron from the RO reductase component to the terminal RO oxygenase component. BPDO degrades biphenyls and polychlorinated biphenyls. BPDO ferredoxin (BphF) has structural features consistent with a minimal and perhaps archetypical Rieske protein in that the in
Probab=40.01 E-value=40 Score=23.59 Aligned_cols=27 Identities=15% Similarity=0.203 Sum_probs=18.1
Q ss_pred eeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 184 LSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 184 ~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
+.|.-..|.+..|.| ...|.|+|+..|
T Consensus 25 ~~v~r~~~~~~a~~~---------~CpH~g~~L~~g 51 (98)
T cd03528 25 IAVYRVDGEFYATDD---------LCTHGDASLSEG 51 (98)
T ss_pred EEEEEECCEEEEECC---------cCCCCCCCCCCC
Confidence 444444566666754 788999888765
No 73
>TIGR02410 carnitine_TMLD trimethyllysine dioxygenase. Members of this family with known function act as trimethyllysine dioxygenase, an enzyme in the pathway for carnitine biosynthesis from lysine. This enzyme is homologous to gamma-butyrobetaine,2-oxoglutarate dioxygenase, which catalyzes the last step in carnitine biosynthesis. Members of this family appear to be eukaryotic only.
Probab=35.95 E-value=34 Score=30.61 Aligned_cols=43 Identities=16% Similarity=0.313 Sum_probs=34.5
Q ss_pred cCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeeccccc
Q 026697 182 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIRVNEY 233 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~~~~~ 233 (235)
..+.++=++|++|+|.| .+++|+-.+- .|.||..-.++.-..|
T Consensus 311 ~~~~~~l~pGd~vi~DN--------~rvLHgRtaf-~g~R~L~G~Y~d~D~~ 353 (362)
T TIGR02410 311 NEIEFKLRPGTVLIFDN--------WRVLHSRTSF-TGYRRMCGCYLTRDDF 353 (362)
T ss_pred cEEEEEcCCccEEEEee--------EEEeecCCCc-CCceEEEEEEEccHHH
Confidence 46677888999999998 6999999887 4889888877765543
No 74
>PHA02577 2 DNA end protector protein; Provisional
Probab=35.87 E-value=23 Score=28.28 Aligned_cols=53 Identities=15% Similarity=0.187 Sum_probs=36.9
Q ss_pred CCcEEEecCCCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCCC
Q 026697 109 EGLQVLHYEAGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQ 164 (235)
Q Consensus 109 e~~~v~rY~~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~~ 164 (235)
-..|++++.+|--|..-+|.-..+.. .--=.+-+++|||.....|-|.|..++
T Consensus 33 r~h~v~kp~~Grly~F~YdAk~KdtL---pywDrfPLI~flg~~~~~g~~l~~GLN 85 (181)
T PHA02577 33 RGHQVVKPQPGRLYTFEYDAKHKDTL---PYWDRFPLIIFLGSGQSKAHTLMYGLN 85 (181)
T ss_pred cccccccCcCceEEEEEecccccCcc---cccccCcEEEEEecCCCCCcceEeeee
Confidence 35789999999988877776432110 111245689999998877889998763
No 75
>cd03530 Rieske_NirD_small_Bacillus Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain. The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium.
Probab=34.32 E-value=52 Score=23.09 Aligned_cols=24 Identities=17% Similarity=0.338 Sum_probs=16.3
Q ss_pred ecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 187 KPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 187 ~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
+...|....|.| ...|+++|+..|
T Consensus 29 r~~~g~~~A~~~---------~CpH~g~~L~~g 52 (98)
T cd03530 29 RTADDEVFALEN---------RCPHKGGPLSEG 52 (98)
T ss_pred EeCCCCEEEEcC---------cCCCCCCCccCC
Confidence 334466666654 788888888765
No 76
>cd03474 Rieske_T4moC Toluene-4-monooxygenase effector protein complex (T4mo), Rieske ferredoxin subunit; The Rieske domain is a [2Fe-2S] cluster binding domain involved in electron transfer. T4mo is a four-protein complex that catalyzes the NADH- and O2-dependent hydroxylation of toluene to form p-cresol. T4mo consists of an NADH oxidoreductase (T4moF), a diiron hydroxylase (T4moH), a catalytic effector protein (T4moD), and a Rieske ferredoxin (T4moC). T4moC contains a Rieske domain and functions as an obligate electron carrier between T4moF and T4moH. Rieske ferredoxins are found as subunits of membrane oxidase complexes, cis-dihydrodiol-forming aromatic dioxygenases, bacterial assimilatory nitrite reductases, and arsenite oxidase. Rieske ferredoxins are also found as soluble electron carriers in bacterial dioxygenase and monooxygenase complexes.
Probab=32.62 E-value=61 Score=23.23 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=18.2
Q ss_pred eeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 184 LSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 184 ~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
+-++...|.+-.|.| ...|+++|+..|
T Consensus 26 ~~~~~~~g~~~A~~n---------~CpH~g~~L~~g 52 (108)
T cd03474 26 LLVAPEGGEFRAFQG---------ICPHQEIPLAEG 52 (108)
T ss_pred EEEEccCCeEEEEcC---------cCCCCCCCcccC
Confidence 345556666666654 778888888765
No 77
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=31.21 E-value=52 Score=29.45 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=33.6
Q ss_pred CeeEecccccEEEEeecCCCCCCCCCCcccCCCCC--cCeEeEEEeeeccccc
Q 026697 183 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVI--KGNKWSSTKWIRVNEY 233 (235)
Q Consensus 183 ~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~--~G~K~i~~~W~~~~~~ 233 (235)
.+..+=++|++|+|.| .+++|+-.+-. .|.|+..-.++....|
T Consensus 313 ~~~~~l~pGd~vi~DN--------~rvlH~R~af~~~~~~R~L~g~Y~d~d~~ 357 (366)
T TIGR02409 313 KFTFKLEPGDLVLFDN--------TRLLHARDAFSNPEGKRHLQGCYADWDGL 357 (366)
T ss_pred EEEEEcCCCcEEEEec--------eEEeecCCCcCCCCCceEEEEEEEccHHH
Confidence 4567788999999988 68999998774 5788888777765543
No 78
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.; PDB: 2CSG_A 2DBI_A 2DBN_A.
Probab=30.57 E-value=28 Score=31.96 Aligned_cols=39 Identities=28% Similarity=0.291 Sum_probs=18.9
Q ss_pred cCeeEec-ccccEEEEeecCCCCCCCCCCcccCCCCCcCeEeEEEeeec
Q 026697 182 TGLSIKP-KMGDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWIR 229 (235)
Q Consensus 182 ~~~~V~P-~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~~ 229 (235)
.-+.|+. ++|+.|+|. .++.|++.++..|..+.-+.+|-
T Consensus 317 ~mv~iP~v~PGD~V~WH---------cD~iH~Vd~~h~g~~~ssV~Yip 356 (416)
T PF07350_consen 317 TMVSIPDVEPGDYVFWH---------CDLIHAVDPEHNGKGDSSVMYIP 356 (416)
T ss_dssp T-EE---B-TT-EEEEE---------TT--EEE--BSS-SS---EEE--
T ss_pred ccccCCCCCCCCeEEEe---------CCccccccccCCCCCCCCeeEec
Confidence 3666764 789999996 49999999999998877766553
No 79
>cd04338 Rieske_RO_Alpha_Tic55 Tic55 is a 55kDa LLS1-related non-heme iron oxygenase associated with protein transport through the plant inner chloroplast membrane. This domain represents the N-terminal Rieske domain of the Tic55 oxygenase alpha subunit. Tic55 is closely related to the oxygenase alpha subunits of a small subfamily of enzymes found in plants as well as oxygenic cyanobacterial photosynthesizers including LLS1 (lethal leaf spot 1, also known as PaO), Ptc52, and ACD1 (accelerated cell death 1). ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis.
Probab=29.78 E-value=68 Score=24.30 Aligned_cols=56 Identities=13% Similarity=0.049 Sum_probs=36.8
Q ss_pred ceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 140 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 140 ~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
.+.+..+..+.+..+|+...|.... ..-+-++-..|.+-.|.| ...|+|.|+..|
T Consensus 15 ~~~W~~v~~~~el~~~~~~~~~v~g----------------~~ivl~r~~~G~v~A~~n---------~CpHrga~L~~G 69 (134)
T cd04338 15 REEWYPLYLLKDVPTDAPLGLSVYD----------------EPFVLFRDQNGQLRCLED---------RCPHRLAKLSEG 69 (134)
T ss_pred ccCcEEEEEHHHCCCCCCEEEEECC----------------ceEEEEEcCCCCEEEEcC---------cCCCCcCcccCC
Confidence 4567788888888888765554321 012223345677777765 888999888877
Q ss_pred e
Q 026697 220 N 220 (235)
Q Consensus 220 ~ 220 (235)
.
T Consensus 70 ~ 70 (134)
T cd04338 70 Q 70 (134)
T ss_pred e
Confidence 3
No 80
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=28.67 E-value=71 Score=28.86 Aligned_cols=47 Identities=26% Similarity=0.407 Sum_probs=29.6
Q ss_pred hhccCCCCCCCCCcEEEecC-CCceeccccccccccccccCCCceEEEEE
Q 026697 98 ADFTFFPLENGEGLQVLHYE-AGQKYEPHFDYFMDEFNTKNGGQRMATVL 146 (235)
Q Consensus 98 ~~~~~~~~~~~e~~~v~rY~-~G~~f~~H~D~~~~~~~~~~~~~R~~T~l 146 (235)
+++-.+|.-....+.|. |. +||.+++|+|.... +.....|+|.+-+-
T Consensus 108 ~~FrflP~wr~ddiMIS-~a~~GGgvg~H~D~YDV-fliQg~G~RRW~v~ 155 (383)
T COG2850 108 EPFRFLPDWRIDDIMIS-FAAPGGGVGPHFDQYDV-FLIQGQGRRRWRVG 155 (383)
T ss_pred HHhccCccccccceEEE-EecCCCccCccccchhe-eEEeecccceeecC
Confidence 35556777667778777 66 69999999996421 11223455655543
No 81
>cd03542 Rieske_RO_Alpha_HBDO Rieske non-heme iron oxygenase (RO) family, 2-Halobenzoate 1,2-dioxygenase (HBDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. HBDO catalyzes the double hydroxylation of 2-halobenzoates with concomitant release of halogenide and carbon dioxide, yielding catechol.
Probab=26.79 E-value=77 Score=23.68 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=19.7
Q ss_pred eeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 184 LSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 184 ~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
+-++...|.+-.|.| ...|+|.++..|
T Consensus 27 ~l~r~~~g~v~A~~n---------~C~Hrg~~L~~g 53 (123)
T cd03542 27 VITRDKDGELNAFIN---------ACSHRGAMLCRR 53 (123)
T ss_pred EEEECCCCCEEEEcc---------cCcCCCCccccc
Confidence 445556788888876 788999988755
No 82
>cd04337 Rieske_RO_Alpha_Cao Cao (chlorophyll a oxygenase) is a rieske non-heme iron-sulfur protein located within the plastid-envelope inner and thylakoid membranes, that catalyzes the conversion of chlorophyllide a to chlorophyllide b. CAO is found not only in plants but also in chlorophytes and prochlorophytes. This domain represents the N-terminal rieske domain of the oxygenase alpha subunit. ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. Cao is closely related to several other plant RO's including Tic 55, a 55 kDa protein associated with protein transport through the inner
Probab=26.14 E-value=86 Score=23.59 Aligned_cols=55 Identities=13% Similarity=0.155 Sum_probs=36.9
Q ss_pred ceEEEEEEEecCCCCCccccCCCCCCCCCCCCCccccccccCcCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 140 QRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 140 ~R~~T~liYLNd~~~GGeT~Fp~~~~~~~~~~~~~~~~~c~~~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
.+.+..+..+++..+|.-+.|..... .-+-++...|++-.|.| ...|.|.|+..|
T Consensus 15 ~~~W~~v~~~~el~~g~~~~~~v~g~----------------~l~l~r~~~g~v~A~~n---------~CpH~g~~L~~G 69 (129)
T cd04337 15 RNFWYPVEFSKDLKMDTMVPFELFGQ----------------PWVLFRDEDGTPGCIRD---------ECAHRACPLSLG 69 (129)
T ss_pred hCccEEEEEHHHCCCCCeEEEEECCc----------------EEEEEECCCCcEEEEeC---------cCCCCcCCcccC
Confidence 45677777788887777666654211 13344556777777765 888999988876
No 83
>PF11191 DUF2782: Protein of unknown function (DUF2782); InterPro: IPR021357 This is a bacterial family of proteins whose function is unknown.
Probab=26.08 E-value=1.1e+02 Score=22.18 Aligned_cols=44 Identities=18% Similarity=0.406 Sum_probs=24.8
Q ss_pred cCeeEecccccEEEEeecCCCCCCCCCCccc-CCCCCcCeEeEEEee
Q 026697 182 TGLSIKPKMGDALLFWSMKPDASLDPSSLHG-GCPVIKGNKWSSTKW 227 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~-g~pV~~G~K~i~~~W 227 (235)
..++|.|+.|. =|+-++++|+.....-.. ..+-..-..|++-.|
T Consensus 61 ~~IkV~P~~G~--~Yyl~d~dg~g~~~~~~~~~~~~~~~p~W~i~~w 105 (105)
T PF11191_consen 61 YMIKVQPKAGP--PYYLVDPDGDGNFSRSDANSDSDVSPPQWVIFSW 105 (105)
T ss_pred eeEEEEeCCCC--CEEEECCCCCCcccccccccCCCCCCcEEEEeeC
Confidence 46899999993 355666776433222122 112222357887776
No 84
>cd00250 CAS_like Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase carrying out three reactions in the biosynthesis of clavulanic acid, an inhibitor of class A serine beta-lactamases. In general, Fe(II)-2OG oxygenases catalyze a hydroxylation reaction, which leads to the incorporation of an oxygen atom from dioxygen into a hydroxyl group and conversion of 2OG to succinate and CO2
Probab=24.37 E-value=90 Score=26.20 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=26.0
Q ss_pred CceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCC
Q 026697 119 GQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPN 162 (235)
Q Consensus 119 G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~ 162 (235)
.....+|+|....+ ..--+++|.-|....+||+|.|-+
T Consensus 93 ~~~l~~HtD~~y~~------~pp~~~~L~cl~~~~~GG~T~~vd 130 (262)
T cd00250 93 NTLLPLHTDLAYHE------YRPGLQILHCLRNTATGGATLLVD 130 (262)
T ss_pred cCCcCccccCCCCC------CCCceEEEEEeccCCCCCcceeee
Confidence 34556899986532 123456666677778899999976
No 85
>PRK09553 tauD taurine dioxygenase; Reviewed
Probab=24.22 E-value=1.3e+02 Score=25.79 Aligned_cols=40 Identities=8% Similarity=-0.093 Sum_probs=29.4
Q ss_pred cCeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcC-eEeEEEeeec
Q 026697 182 TGLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG-NKWSSTKWIR 229 (235)
Q Consensus 182 ~~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G-~K~i~~~W~~ 229 (235)
..++.+=++|++|+|.| .+++|++..-..+ .|..-+..+.
T Consensus 232 ~~~~~~w~~GD~viwDN--------r~~~H~a~~~~~~~~R~~~R~~v~ 272 (277)
T PRK09553 232 FQVRWRWQPNDVAIWDN--------RVTQHYANADYLPQRRIMHRATIL 272 (277)
T ss_pred eEEEEecCCCCEEEEcC--------cceeEecccCCCCCceEEEEEeec
Confidence 46778889999999988 5899998755433 5666555554
No 86
>TIGR02409 carnitine_bodg gamma-butyrobetaine hydroxylase. Members of this protein family are gamma-butyrobetaine hydroxylase, both bacterial and eukarytotic. This enzyme catalyzes the last step in the conversion of lysine to carnitine. Carnitine can serve as a compatible solvent in bacteria and also participates in fatty acid metabolism.
Probab=24.13 E-value=66 Score=28.79 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=24.5
Q ss_pred eeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCC
Q 026697 121 KYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNA 163 (235)
Q Consensus 121 ~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~ 163 (235)
...+|+|....+ ..-.+++|.-+.-..+||+|.|-+.
T Consensus 186 ~l~~HtD~~y~~------~pP~~~~L~c~~~~~~GG~T~~~d~ 222 (366)
T TIGR02409 186 GLPFHTDNPYRD------HPPGLQLLHCLESTVEGGDSLFVDG 222 (366)
T ss_pred cccccccCCccC------CCCceeeeeecccCCCCcceeeeeH
Confidence 355899976432 1123566666666779999999763
No 87
>PF00355 Rieske: Rieske [2Fe-2S] domain; InterPro: IPR017941 There are multiple types of iron-sulphur clusters which are grouped into three main categories based on their atomic content: [2Fe-2S], [3Fe-4S], [4Fe-4S] (see PDOC00176 from PROSITEDOC), and other hybrid or mixed metal types. Two general types of [2Fe-2S] clusters are known and they differ in their coordinating residues. The ferredoxin-type [2Fe-2S] clusters are coordinated to the protein by four cysteine residues (see PDOC00175 from PROSITEDOC). The Rieske-type [2Fe-2S] cluster is coordinated to its protein by two cysteine residues and two histidine residues [, ]. The structure of several Rieske domains has been solved []. It contains three layers of antiparallel beta sheets forming two beta sandwiches. Both beta sandwiches share the central sheet 2. The metal-binding site is at the top of the beta sandwich formed by the sheets 2 and 3. The Fe1 iron of the Rieske cluster is coordinated by two cysteines while the other iron Fe2 is coordinated by two histidines. Two inorganic sulphide ions bridge the two iron ions forming a flat, rhombic cluster. Rieske-type iron-sulphur clusters are common to electron transfer chains of mitochondria and chloroplast and to non-haem iron oxygenase systems: The Rieske protein of the Ubiquinol-cytochrome c reductase (1.10.2.2 from EC) (also known as the bc1 complex or complex III), a complex of the electron transport chains of mitochondria and of some aerobic prokaryotes; it catalyses the oxidoreduction of ubiquinol and cytochrome c. The Rieske protein of chloroplastic plastoquinone-plastocyanin reductase (1.10.99.1 from EC) (also known as the b6f complex). It is functionally similar to the bc1 complex and catalyses the oxidoreduction of plastoquinol and cytochrome f. Bacterial naphthalene 1,2-dioxygenase subunit alpha, a component of the naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyses the incorporation of both atoms of molecular oxygen into naphthalene to form cis-naphthalene dihydrodiol. Bacterial 3-phenylpropionate dioxygenase ferredoxin subunit. Bacterial toluene monoxygenase. Bacterial biphenyl dioxygenase. ; GO: 0016491 oxidoreductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process; PDB: 2XRX_A 2XR8_O 2XSH_G 2XSO_I 2YFI_C 2YFL_A 2YFJ_K 1G8J_D 1G8K_D 1NYK_B ....
Probab=23.51 E-value=85 Score=21.77 Aligned_cols=29 Identities=24% Similarity=0.511 Sum_probs=21.3
Q ss_pred CeeEecccccEEEEeecCCCCCCCCCCcccCCCCCcCe
Q 026697 183 GLSIKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKGN 220 (235)
Q Consensus 183 ~~~V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G~ 220 (235)
.+.+....|....|.| ...|.++|+..|.
T Consensus 26 ~v~~~~~~g~~~A~~~---------~CpH~g~~l~~~~ 54 (97)
T PF00355_consen 26 LVLVRRSDGEIYAFSN---------RCPHQGCPLSEGP 54 (97)
T ss_dssp EEEEEETTTEEEEEES---------B-TTTSBBGGCSS
T ss_pred EEEEEeCCCCEEEEEc---------cCCccceeEccee
Confidence 4555667777777765 8899999998884
No 88
>cd03467 Rieske Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.
Probab=22.17 E-value=1.6e+02 Score=20.45 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=17.9
Q ss_pred CCCCcccCCCCCcCe--EeEEEeeeccccc
Q 026697 206 DPSSLHGGCPVIKGN--KWSSTKWIRVNEY 233 (235)
Q Consensus 206 d~~~~H~g~pV~~G~--K~i~~~W~~~~~~ 233 (235)
+....|.++|+..|. .-.++=.+|...|
T Consensus 39 ~~~CpH~g~~l~~~~~~~~~i~Cp~H~~~f 68 (98)
T cd03467 39 SNRCTHQGCPLSEGEGEDGCIVCPCHGSRF 68 (98)
T ss_pred cCcCCCCCccCCcCccCCCEEEeCCCCCEE
Confidence 457889999998763 4455555555444
No 89
>cd03535 Rieske_RO_Alpha_NDO Rieske non-heme iron oxygenase (RO) family, Nathphalene 1,2-dioxygenase (NDO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. NDO is a three-component RO system consisting of a reductase, a ferredoxin, and a hetero-hexameric alpha-beta subunit oxygenase component. NDO catalyzes the oxidation of naphthalene to cis-(1R,2S)-dihydroxy-1,2-dihydronaphthalene (naphthalene cis-dihydrodiol) with the consumption of O2 and NAD(P)H. NDO has a relaxed substrate specificity and can oxidize almost 1
Probab=21.56 E-value=78 Score=23.51 Aligned_cols=25 Identities=20% Similarity=0.353 Sum_probs=17.2
Q ss_pred EecccccEEEEeecCCCCCCCCCCcccCCCCCcC
Q 026697 186 IKPKMGDALLFWSMKPDASLDPSSLHGGCPVIKG 219 (235)
Q Consensus 186 V~P~~G~alvF~n~~~~g~~d~~~~H~g~pV~~G 219 (235)
++-..|..-.|.| ...|+|.|+..|
T Consensus 31 ~r~~~g~~~A~~n---------~CpHrg~~L~~g 55 (123)
T cd03535 31 CRDEDGEIRAMFN---------SCRHRGMQVCRA 55 (123)
T ss_pred EECCCCCEEEEcc---------cCccCCCEeecc
Confidence 3445677777765 778888888765
No 90
>PLN00139 hypothetical protein; Provisional
Probab=21.13 E-value=1e+02 Score=27.17 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=24.1
Q ss_pred CCceeccccccccccccccCCCceEEEEEEEecCCCCCccccCCCC
Q 026697 118 AGQKYEPHFDYFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNA 163 (235)
Q Consensus 118 ~G~~f~~H~D~~~~~~~~~~~~~R~~T~liYLNd~~~GGeT~Fp~~ 163 (235)
+.+...+|.|..... ..-..++|.-+.-+.+||+|.|-+.
T Consensus 109 ~~~~i~~H~E~sy~~------~pP~~~~f~C~~~p~~GGeT~~aD~ 148 (320)
T PLN00139 109 LSEFIYYHHEMVLIK------ESPKKVILFCEIPPPEGGQTPFVPS 148 (320)
T ss_pred ccccccccccccCcc------CCCceEEEEecccCCCCCCCeeecH
Confidence 334557999986532 1123344444555668999999653
No 91
>cd08788 CARD_NOD2_2_CARD15 Caspase activation and recruitment domain of NOD2, repeat 2. Caspase activation and recruitment domain (CARD) similar to that found in human NOD2 (CARD15), repeat 2. NOD2 is a member of the Nod-like receptor (NLR) family, which plays a central role in the innate immune response. NLRs typically contain an N-terminal effector domain, a central nucleotide-binding domain and a C-terminal ligand-binding region of several leucine-rich repeats (LRRs). In NOD2, as well as NOD1, the N-terminal effector domain is a CARD. NOD2 contains two N-terminal CARD repeats. Mutations in NOD2 have been associated with Crohns disease and Blau syndrome. Nod2-CARDs have been shown to interact with the CARD domain of the downstream effector RICK (RIP2, CARDIAK), a serine/threonine kinase. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are pr
Probab=20.50 E-value=47 Score=23.15 Aligned_cols=15 Identities=20% Similarity=0.430 Sum_probs=12.7
Q ss_pred EcCCCCHHHHHHHHH
Q 026697 36 YHNFLSKEECEYLIN 50 (235)
Q Consensus 36 ~~~~Ls~~Ec~~li~ 50 (235)
-++++|.+||+.|..
T Consensus 25 ~~G~is~~Ecd~Ir~ 39 (81)
T cd08788 25 TRGFFSSYDCDEIRL 39 (81)
T ss_pred HcCCccHhhcchhhc
Confidence 368999999999865
No 92
>cd05568 PTS_IIB_bgl_like PTS_IIB_bgl_like: the PTS (phosphotransferase system) IIB domain of a family of sensory systems composed of a membrane-bound sugar-sensor (similar to BglF) and a transcription antiterminator (similar to BglG) which regulate expression of genes involved in sugar utilization. The domain architecture of the IIB-containing protein includes a region N-terminal to the IIB domain which is homologous to the BglG transcription antiterminator with an RNA-binding domain followed by two homologous domains, PRD1 and PRD2 (PTS Regulation Domains). C-terminal to the IIB domain is a domain similar to the PTS IIA domain. In this system, the BglG-like region and the IIB and IIA-like domains are all expressed together as a single multidomain protein. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include this sensory system with similarity to the bacterial
Probab=20.26 E-value=2.1e+02 Score=19.00 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=19.4
Q ss_pred CEEEEcCCCCHHHHHHHHHHhC
Q 026697 32 RAFVYHNFLSKEECEYLINLAT 53 (235)
Q Consensus 32 ~i~~~~~~Ls~~Ec~~li~~~~ 53 (235)
.++.+..|++++|.+.|.+...
T Consensus 62 pvi~i~~~l~~~d~~~i~~~i~ 83 (85)
T cd05568 62 PVIVVSPILTEEDIKKIRKFIK 83 (85)
T ss_pred CEEEECCCCCHHHHHHHHHHHh
Confidence 5789999999999999988764
Done!