BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026700
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 107/195 (54%), Gaps = 11/195 (5%)
Query: 17 LYSDGSISRS---PNISFDVPFINDNSILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPI 73
L D +I+R P+ + + + +L KDL N + +RL+ P + +S KLP+
Sbjct: 26 LNPDRTITRPIQIPSTAASPDPTSSSPVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPL 85
Query: 74 VFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYRLGPEHRLPAALEDACCALKW 133
V YFHGGGF S H+ C +A + DYRL PEHRLPAA +DA AL+W
Sbjct: 86 VVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQW 145
Query: 134 LQGQAIMHANVMDTWLGE-VDFDRVFVLGYSSGGNLAHHLAVRFGPGSVELAPVRVRGYV 192
++ + D WL DF F++G S+GGN+A+H +R + EL P++++G V
Sbjct: 146 IK-------DSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLV 198
Query: 193 LMSPFFGGCERTRSE 207
L P FGG +RT SE
Sbjct: 199 LDEPGFGGSKRTGSE 213
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 45 DLIFNENIDLRLRLYKPTSIVNS--------------------STKLPIVFYFHGGGFCF 84
D I ++++ L +R+Y+ + ++ + P++ +FHGG F
Sbjct: 66 DHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVH 125
Query: 85 GSRTFPNNHNICVRLASILQAAVIEPDYRLGPEHRLPAALEDACCALKWLQGQAIMHANV 144
S + ++C R + + V+ +YR PEHR P A +D ALKW+ Q M +
Sbjct: 126 SSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRS-- 183
Query: 145 MDTWLGEVDFDRVFVLGYSSGGNLAHHLAVRFGPGSVELAPVRVRGYVLMSPFFGGCERT 204
G RVF+ G SSGGN+AHH+AVR V+V G +L++ FGG ERT
Sbjct: 184 -----GGDAQARVFLSGDSSGGNIAHHVAVRAADEG-----VKVCGNILLNAMFGGTERT 233
Query: 205 RSEEERPIDGIWTLEMYDRNLRVKLY 230
E ER +DG + + + DR+ K Y
Sbjct: 234 --ESERRLDGKYFVTLQDRDWYWKAY 257
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 31/201 (15%)
Query: 45 DLIFNENIDLRLRLYKPT--------SIVN-----SSTKLPIVFYFHGGGFCFGSRTFPN 91
D++ + I+L R+Y+P SI++ +P++ +FHGG F S
Sbjct: 74 DVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAI 133
Query: 92 NHNICVRLASILQAAVIEPDYRLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGE 151
+C RL + + V+ +YR PE+ P A +D AL W+ + +WL
Sbjct: 134 YDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSR---------SWLKS 184
Query: 152 VDFDRV--FVLGYSSGGNLAHHLAVRFGPGSVELAPVRVRGYVLMSPFFGGCERTRSEEE 209
+V F+ G SSGGN+AH++A+R G ++ V G +L++P FGG ERT E E
Sbjct: 185 KKDSKVHIFLAGDSSGGNIAHNVALRAGESGID-----VLGNILLNPMFGGNERT--ESE 237
Query: 210 RPIDGIWTLEMYDRNLRVKLY 230
+ +DG + + + DR+ K +
Sbjct: 238 KSLDGKYFVTVRDRDWYWKAF 258
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 71/121 (58%), Gaps = 15/121 (12%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYR 113
+R R+Y P + LP V Y+HGGGF FGS + +IC RL+ + + V+ DYR
Sbjct: 60 IRARVYFP----KKAAGLPAVLYYHGGGFVFGS--IETHDHICRRLSRLSDSVVVSVDYR 113
Query: 114 LGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHLA 173
L PE++ P A+EDA ALKW+ +A LG VD DR+ V G S+GGNLA ++
Sbjct: 114 LAPEYKFPTAVEDAYAALKWVADRA--------DELG-VDPDRIAVAGDSAGGNLAAVVS 164
Query: 174 V 174
+
Sbjct: 165 I 165
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 19/123 (15%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYR 113
+R R+Y+P +LP V Y+HGGGF GS + ++C RLA++ A V+ DYR
Sbjct: 63 IRARVYRP----RDGERLPAVVYYHGGGFVLGS--VETHDHVCRRLANLSGAVVVSVDYR 116
Query: 114 LGPEHRLPAALEDACCALKWLQGQAIMHANVMDTW--LGEVDFDRVFVLGYSSGGNLAHH 171
L PEH+ PAA+EDA A KW V D + LG VD ++ V G S+GGNLA
Sbjct: 117 LAPEHKFPAAVEDAYDAAKW----------VADNYDKLG-VDNGKIAVAGDSAGGNLAAV 165
Query: 172 LAV 174
A+
Sbjct: 166 TAI 168
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 21/130 (16%)
Query: 47 IFNENIDLRLRLY--KPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQ 104
I N D+R+R+Y KP S P++ Y+HGGGF S ++ +C R+A +
Sbjct: 61 IKGRNGDIRVRVYQQKPDS--------PVLVYYHGGGFVICS--IESHDALCRRIARLSN 110
Query: 105 AAVIEPDYRLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSS 164
+ V+ DYRL PEH+ PAA+ D A KW+ A +D ++FV G S+
Sbjct: 111 STVVSVDYRLAPEHKFPAAVYDCYDATKWVAENAEEL---------RIDPSKIFVGGDSA 161
Query: 165 GGNLAHHLAV 174
GGNLA +++
Sbjct: 162 GGNLAAAVSI 171
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 14/116 (12%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYR 113
L++R+Y+P + P + Y+HGGG+ G + +C LA +A V DYR
Sbjct: 60 LKVRMYRPEGV---EPPYPALVYYHGGGWVVGD--LETHDPVCRVLAKDGRAVVFSVDYR 114
Query: 114 LGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLA 169
L PEH+ PAA+EDA AL+W+ +A +D R+ V G S+GGNLA
Sbjct: 115 LAPEHKFPAAVEDAYDALQWIAERAADF---------HLDPARIAVGGDSAGGNLA 161
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYR 113
L++R Y+P + P + Y+HGGG+ G + +C LA +A V DYR
Sbjct: 60 LKVRXYRPEGV---EPPYPALVYYHGGGWVVGD--LETHDPVCRVLAKDGRAVVFSVDYR 114
Query: 114 LGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLA 169
L PEH+ PAA+EDA AL+W+ +A +D R+ V G S+GGNLA
Sbjct: 115 LAPEHKFPAAVEDAYDALQWIAERAADF---------HLDPARIAVGGDSAGGNLA 161
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYR 113
L++R+Y+P + P + Y+HGG + G + +C LA +A V DYR
Sbjct: 60 LKVRMYRPEGV---EPPYPALVYYHGGSWVVGD--LETHDPVCRVLAKDGRAVVFSVDYR 114
Query: 114 LGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLA 169
L PEH+ PAA+EDA AL+W+ +A +D R+ V G S+GGNLA
Sbjct: 115 LAPEHKFPAAVEDAYDALQWIAERAADF---------HLDPARIAVGGDSAGGNLA 161
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 56 LRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYRLG 115
+R+Y+ + T P+V Y H GGF G+ +H C+ LA + AV+ DYRL
Sbjct: 75 VRIYR-----AAPTPAPVVVYCHAGGFALGN--LDTDHRQCLELARRARCAVVSVDYRLA 127
Query: 116 PEHRLPAALEDACCALKWLQGQA 138
PEH PAAL DA L W+ G A
Sbjct: 128 PEHPYPAALHDAIEVLTWVVGNA 150
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 48 FNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAV 107
+ + ++++R P N++ +P++ + HGGGF G T ++ CV +A L AV
Sbjct: 59 LDGDPEVKIRFVTPD---NTAGPVPVLLWIHGGGFAIG--TAESSDPFCVEVARELGFAV 113
Query: 108 IEPDYRLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGN 167
+YRL PE P + D AL ++ A LG +D R+ V G S+GG
Sbjct: 114 ANVEYRLAPETTFPGPVNDCYAALLYIHAHA--------EELG-IDPSRIAVGGQSAGGG 164
Query: 168 LA 169
LA
Sbjct: 165 LA 166
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 48 FNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAV 107
+ + ++++R P N++ +P++ + HGGGF G T ++ CV +A L AV
Sbjct: 59 LDGDPEVKIRFVTPD---NTAGPVPVLLWIHGGGFAIG--TAESSDPFCVEVARELGFAV 113
Query: 108 IEPDYRLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGN 167
+YRL PE P + D AL ++ A LG +D R+ V G S+GG
Sbjct: 114 ANVEYRLAPETTFPGPVNDCYAALLYIHAHA--------EELG-IDPSRIAVGGQSAGGG 164
Query: 168 LA 169
LA
Sbjct: 165 LA 166
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 53 DLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDY 112
+++ R+Y P + ++ Y+HGGGF G + +C + + Q I DY
Sbjct: 76 NIKARVYYP----KTQGPYGVLVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDY 129
Query: 113 RLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHL 172
RL PE++ PAA+ D+ ALKW+ N + + G+ + V G S+GGNLA
Sbjct: 130 RLAPENKFPAAVVDSFDALKWVY-------NNSEKFNGKYG---IAVGGDSAGGNLAAVT 179
Query: 173 AV 174
A+
Sbjct: 180 AI 181
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 53 DLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDY 112
+++ R+Y P + ++ Y+HGGGF G + +C + + Q I DY
Sbjct: 76 NIKARVYYP----KTQGPYGVLVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDY 129
Query: 113 RLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHL 172
RL PE++ PAA+ D+ ALKW+ N + + G+ + V G S+GGNLA
Sbjct: 130 RLAPENKFPAAVVDSFDALKWVY-------NNSEKFNGKYG---IAVGGDSAGGNLAAVT 179
Query: 173 AV 174
A+
Sbjct: 180 AI 181
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 53 DLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDY 112
+++ R+Y P + ++ Y+HGGGF G + +C + + Q I DY
Sbjct: 76 NIKARVYYP----KTQGPYGVLVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDY 129
Query: 113 RLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHL 172
RL PE++ PAA+ D+ ALKW+ N + + G+ + V G S+GGNLA
Sbjct: 130 RLAPENKFPAAVVDSFDALKWVY-------NNSEKFNGKYG---IAVGGDSAGGNLAAVT 179
Query: 173 AV 174
A+
Sbjct: 180 AI 181
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 53 DLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDY 112
+++ R+Y P + ++ Y+HGGGF G + +C + + Q I DY
Sbjct: 76 NIKARVYYP----KTQGPYGVLVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDY 129
Query: 113 RLGPEHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHL 172
RL PE++ PAA+ D+ ALKW+ N + + G+ + V G S+GGNLA
Sbjct: 130 RLAPENKFPAAVVDSFDALKWVY-------NNSEKFNGKYG---IAVGGDSAGGNLAAVT 179
Query: 173 AV 174
A+
Sbjct: 180 AI 181
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 74 VFYFHGGGFCFGSRTFPNNHNICV-RLASILQAAVIEPDYRLGPEHRLPAALEDACCALK 132
+ Y HGGG+ GS N H V ++ QAA + DYRL PEH PAA+ED A +
Sbjct: 70 ILYLHGGGYVMGSI---NTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYR 126
Query: 133 WLQGQ 137
WL Q
Sbjct: 127 WLLDQ 131
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 74 VFYFHGGGFCFGSRTFPNNHNICV-RLASILQAAVIEPDYRLGPEHRLPAALEDACCALK 132
+ Y HGGG+ GS N H V ++ QAA + DYRL PEH PAA+ED A +
Sbjct: 83 ILYLHGGGYVMGSI---NTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYR 139
Query: 133 WLQGQ 137
WL Q
Sbjct: 140 WLLDQ 144
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 74 VFYFHGGGFCFGSRTFPNNHNI-CVRLASILQAAVIEPDYRLGPEHRLPAALEDACCALK 132
+ YFHGGG+ GS P+ H + +LA A + DYRL PE+ PAA++D A +
Sbjct: 83 ILYFHGGGYISGS---PSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 139
Query: 133 WLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHLAVRFGPGSVELAPVRVRGYV 192
L A DR+ + G S+GG L ++ + + G V
Sbjct: 140 ALLKTA-------------GSADRIIIAGDSAGGGLTTASMLKAKEDGLPMP----AGLV 182
Query: 193 LMSPF 197
++SPF
Sbjct: 183 MLSPF 187
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 21/125 (16%)
Query: 74 VFYFHGGGFCFGSRTFPNNHNI-CVRLASILQAAVIEPDYRLGPEHRLPAALEDACCALK 132
+ YFHGGG+ GS P+ H + +LA A + DYRL PE+ PAA++D A +
Sbjct: 97 ILYFHGGGYISGS---PSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 153
Query: 133 WLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHLAVRFGPGSVELAPVRVRGYV 192
L A DR+ + G S+GG L ++ + + G V
Sbjct: 154 ALLKTA-------------GSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPA----GLV 196
Query: 193 LMSPF 197
++SPF
Sbjct: 197 MLSPF 201
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 53 DLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRL-ASILQAAVIEPD 111
D+ RLY P T ++Y HGGGF G+ + H+ RL A VI D
Sbjct: 74 DVTTRLYSP-----QPTSQATLYYLHGGGFILGNL---DTHDRIXRLLARYTGCTVIGID 125
Query: 112 YRLGPEHRLPAALEDACCALKWLQGQA 138
Y L P+ R P A+E+ + A
Sbjct: 126 YSLSPQARYPQAIEETVAVCSYFSQHA 152
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 22/136 (16%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSR-TFPNNHNICVRLASILQAAVIEPDY 112
L L +++P KLP++ + +GG F +GS +P N + + + +Y
Sbjct: 106 LYLNVFRPAG-TKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINY 164
Query: 113 RLGP-----------EHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLG 161
R GP E A L D L+W+ D D+V + G
Sbjct: 165 RTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGG---------DPDKVMIFG 215
Query: 162 YSSGGNLAHHLAVRFG 177
S+G H + +G
Sbjct: 216 ESAGAMSVAHQLIAYG 231
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 37/182 (20%)
Query: 40 SILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRL 99
S+ YK+L L + ++ P + S LP++ + HGG F G+ + P +L
Sbjct: 69 SLSYKELPRQSEDCLYVNVFAPDT---PSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKL 123
Query: 100 ASILQAAVIEPDYRLGP-----------EHRLPAALEDACCALKWLQGQAIMHANVMDTW 148
A+ + V+ +YRLGP + L D ALKW++
Sbjct: 124 AAQGEVIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG----- 178
Query: 149 LGEVDFDRVFVLGYSSGG-NLAHHLAVRFGPGSVELAPVRVRGYVLMSPFFGGCERTRSE 207
D D V V G S+GG ++A LA+ G + A + G RT ++
Sbjct: 179 ----DPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIME-----------SGASRTMTK 223
Query: 208 EE 209
E+
Sbjct: 224 EQ 225
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 40 SILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRL 99
S+ Y +L L + ++ P + S LP++ + HGG F G+ + P +L
Sbjct: 69 SLSYTELPRQSEDCLYVNVFAPDT---PSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKL 123
Query: 100 ASILQAAVIEPDYRLGP-----------EHRLPAALEDACCALKWLQGQAIMHANVMDTW 148
A+ + V+ +YRLGP + L D ALKW++
Sbjct: 124 AAQGEVIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG----- 178
Query: 149 LGEVDFDRVFVLGYSSGG-NLAHHLAVRFGPG 179
D D V V G S+GG ++A LA+ G
Sbjct: 179 ----DPDNVTVFGESAGGMSIAALLAMPAAKG 206
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 37/182 (20%)
Query: 40 SILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRL 99
S+ Y +L L + ++ P + S LP++ + HGG F G+ + P +L
Sbjct: 69 SLSYTELPRQSEDCLYVNVFAPDT---PSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKL 123
Query: 100 ASILQAAVIEPDYRLGP-----------EHRLPAALEDACCALKWLQGQAIMHANVMDTW 148
A+ + V+ +YRLGP + L D ALKW++
Sbjct: 124 AAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGG----- 178
Query: 149 LGEVDFDRVFVLGYSSGG-NLAHHLAVRFGPGSVELAPVRVRGYVLMSPFFGGCERTRSE 207
D D V V G S+GG ++A LA+ G + A + G RT ++
Sbjct: 179 ----DPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIME-----------SGASRTMTK 223
Query: 208 EE 209
E+
Sbjct: 224 EQ 225
>pdb|1UKC|A Chain A, Crystal Structure Of Aspergillus Niger Esta
pdb|1UKC|B Chain B, Crystal Structure Of Aspergillus Niger Esta
Length = 522
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYR 113
L + ++KP S S +KLP+ + GGG+ S N + V AS + +YR
Sbjct: 86 LFINVFKP-STATSQSKLPVWLFIQGGGYAENSNA--NYNGTQVIQASDDVIVFVTFNYR 142
Query: 114 LGP-----------EHRLPAALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGY 162
+G L A L D AL+W++ ++ + G D D + + G
Sbjct: 143 VGALGFLASEKVRQNGDLNAGLLDQRKALRWVK-------QYIEQFGG--DPDHIVIHGV 193
Query: 163 SSG-GNLAHHLAVRFG 177
S+G G++A+HL+ G
Sbjct: 194 SAGAGSVAYHLSAYGG 209
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 22/141 (15%)
Query: 39 NSILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGS---RTFPNNH-N 94
+ + +D + + L L ++ P S LP++ + +GG F GS F NN+
Sbjct: 66 QATITQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLY 125
Query: 95 ICVRLASILQAAVIEPDYRLGP-------EHRLPA--ALEDACCALKWLQGQAIMHANVM 145
+A+ V+ +YR+GP + LP L D A+ W++
Sbjct: 126 DGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGG-- 183
Query: 146 DTWLGEVDFDRVFVLGYSSGG 166
D D + + G S+GG
Sbjct: 184 -------DPDNITLFGESAGG 197
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 21/99 (21%)
Query: 73 IVFYFHGGGFCFGSRT--FPNNHNICVRLASILQAAVIEPDYRLGPEHRLPAALEDACCA 130
++ Y HGGG FG P +I ++Q + YRL PE L +ED +
Sbjct: 31 VIVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLS-----YRLLPEVSLDCIIEDVYAS 85
Query: 131 LKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLA 169
+Q Q ++N +F G SSG L+
Sbjct: 86 FDAIQSQ---YSNC-----------PIFTFGRSSGAYLS 110
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 49 NENIDLRL-------RLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLAS 101
ENI L+L +Y P + + +LP++ + HGGG G+ + + + LA+
Sbjct: 82 KENIPLKLSEDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAASTYDG----LALAA 136
Query: 102 ILQAAVIEPDYRL--------GPEH-RLPAALEDACCALKWLQ 135
V+ YRL G EH R D AL+W+Q
Sbjct: 137 HENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQ 179
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 49 NENIDLRL-------RLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLAS 101
ENI L+L +Y P + + +LP++ + HGGG G+ + + + LA+
Sbjct: 85 KENIPLKLSEDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAASTYDG----LALAA 139
Query: 102 ILQAAVIEPDYRL--------GPEH-RLPAALEDACCALKWLQ 135
V+ YRL G EH R D AL+W+Q
Sbjct: 140 HENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQ 182
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 33.9 bits (76), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 49 NENIDLRL-------RLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLAS 101
ENI L+L +Y P + + +LP++ + HGGG G+ + + + LA+
Sbjct: 87 KENIPLKLSEDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAASTYDG----LALAA 141
Query: 102 ILQAAVIEPDYRL--------GPEH-RLPAALEDACCALKWLQ 135
V+ YRL G EH R D AL+W+Q
Sbjct: 142 HENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQ 184
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 21/103 (20%)
Query: 49 NENIDLRL-------RLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLAS 101
ENI L+L +Y P + + +LP++ + HGGG G+ + + + LA+
Sbjct: 87 KENIPLKLSEDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAASTYDG----LALAA 141
Query: 102 ILQAAVIEPDYRL--------GPEH-RLPAALEDACCALKWLQ 135
V+ YRL G EH R D AL+W+Q
Sbjct: 142 HENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQ 184
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 39 NSILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGS---RTFPNNH-N 94
+ + +D + + L L ++ P S LP++ + +GG F GS F NN+
Sbjct: 66 QATITQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLY 125
Query: 95 ICVRLASILQAAVIEPDYRLGP-------EHRLPA--ALEDACCALKWLQ 135
+A+ V+ +YR+GP + LP L D A+ W++
Sbjct: 126 DGEEIATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVK 175
>pdb|3D3N|A Chain A, Crystal Structure Of LipaseESTERASE (LP_2923) FROM
Lactobacillus Plantarum. Northeast Structural Genomics
Consortium Target Lpr108
pdb|3D3N|B Chain B, Crystal Structure Of LipaseESTERASE (LP_2923) FROM
Lactobacillus Plantarum. Northeast Structural Genomics
Consortium Target Lpr108
Length = 284
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 16/106 (15%)
Query: 66 NSSTKLPIVFYFHGGGFCF--GSRTFPNNHNICVRL-ASILQAAVIEPDYRLGPEHRLPA 122
++ PI GGGF + G P I R A+ V+ +G + P
Sbjct: 29 ETAVDYPIXIICPGGGFTYHSGREEAP----IATRXXAAGXHTVVLNYQLIVGDQSVYPW 84
Query: 123 ALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNL 168
AL+ + W+ QA H VD R+ + G+S+GG++
Sbjct: 85 ALQQLGATIDWITTQASAH---------HVDCQRIILAGFSAGGHV 121
>pdb|3BXP|A Chain A, Crystal Structure Of A Putative Carboxylesterase (lp_2923)
From Lactobacillus Plantarum Wcfs1 At 1.70 A Resolution
pdb|3BXP|B Chain B, Crystal Structure Of A Putative Carboxylesterase (lp_2923)
From Lactobacillus Plantarum Wcfs1 At 1.70 A Resolution
Length = 277
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 16/106 (15%)
Query: 66 NSSTKLPIVFYFHGGGFCF--GSRTFPNNHNICVRL-ASILQAAVIEPDYRLGPEHRLPA 122
++ PI GGGF + G P I R A+ V+ +G + P
Sbjct: 30 ETAVDYPIXIICPGGGFTYHSGREEAP----IATRXXAAGXHTVVLNYQLIVGDQSVYPW 85
Query: 123 ALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNL 168
AL+ + W+ QA H VD R+ + G+S+GG++
Sbjct: 86 ALQQLGATIDWITTQASAH---------HVDCQRIILAGFSAGGHV 122
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 16/101 (15%)
Query: 47 IFNENID-LRLRLYKPTS--IVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASIL 103
+ ++N D L L +Y PT I + ++K P++ Y HGG + G+ N LAS
Sbjct: 108 VQDQNEDCLYLNIYVPTEDDIHDQNSKKPVMVYIHGGSYMEGT----GNMIDGSILASYG 163
Query: 104 QAAVIEPDYRLG---------PEHRLPAALEDACCALKWLQ 135
VI +YRLG + L D AL+W++
Sbjct: 164 NVIVITINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIE 204
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 20/90 (22%)
Query: 66 NSSTKLPIVFYFHGGGFCFGSRTFP-NNHNICVRLASILQAAVIEPDYRLG--------P 116
N++ LPI+ + +GGGF GS T N +I + +++ A+ YR+G P
Sbjct: 136 NTTNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASF---QYRVGAFGFLHLAP 192
Query: 117 E------HRLPA--ALEDACCALKWLQGQA 138
E P L D A++WL+ A
Sbjct: 193 EMPSEFAEEAPGNVGLWDQALAIRWLKDNA 222
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 46 LIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQA 105
L F+E+ L L +Y P + +LP++ + HGGG G + + + L++
Sbjct: 88 LKFSEDC-LYLNIYTPADLTKRG-RLPVMVWIHGGGLMVGGASTYDG----LALSAHENV 141
Query: 106 AVIEPDYRL--------GPEH-RLPAALEDACCALKWLQ 135
V+ YRL G EH R D AL+W+Q
Sbjct: 142 VVVTIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQ 180
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 25 RSPNISFDVPFINDNSILYKDLIFNENIDLRLRLYKPTS--IVNSSTKLPIVFYFHGGGF 82
R P + V F N+ ++ + L L +Y PT I +S P++ Y HGG +
Sbjct: 96 RLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSY 155
Query: 83 CFGSRTFPNNHNICVRLASILQAAVIEPDYRLG 115
G+ N ++ V LAS VI +YRLG
Sbjct: 156 MEGTG---NLYDGSV-LASYGNVIVITVNYRLG 184
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 25 RSPNISFDVPFINDNSILYKDLIFNENIDLRLRLYKPTS--IVNSSTKLPIVFYFHGGGF 82
R P + V F N+ ++ + L L +Y PT I +S P++ Y HGG +
Sbjct: 83 RLPEVMLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVYIHGGSY 142
Query: 83 CFGSRTFPNNHNICVRLASILQAAVIEPDYRLG 115
G+ N ++ V LAS VI +YRLG
Sbjct: 143 MEGTG---NLYDGSV-LASYGNVIVITVNYRLG 171
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFP 90
L L ++ P + K P++F+ HGG F FGS + P
Sbjct: 85 LYLNIWSPAA---DGKKRPVLFWIHGGAFLFGSGSSP 118
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 54 LRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFP 90
L L ++ P + K P++F+ HGG F FGS + P
Sbjct: 85 LYLNIWSPAA---DGKKRPVLFWIHGGAFLFGSGSSP 118
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 21/118 (17%)
Query: 66 NSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYRLGPEHRLP---- 121
N LP++ + HGGGF FGS + H ++ VI +YRL L
Sbjct: 110 NRFAGLPVLVFIHGGGFAFGSGD-SDLHGPEYLVSK--DVIVITFNYRLNVYGFLSLNST 166
Query: 122 -----AALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGNLAHHLAV 174
A L D LKW+Q A D V ++G S+G H L++
Sbjct: 167 SVPGNAGLRDMVTLLKWVQRNAHFFGGRPDD---------VTLMGQSAGAAATHILSL 215
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 34/198 (17%)
Query: 40 SILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCF-GSRTFPNNHNICVR 98
S +++ ++ N+ L + + +P +S LP++ + GGGF GS FP + +
Sbjct: 84 SKIFQVVLPNDEDCLTINVIRPPG-TRASAGLPVMLWIFGGGFELGGSSLFPGDQMVAKS 142
Query: 99 LASILQAAVIEPDYRL-------GP----EHRLPAALEDACCALKWLQGQAIMHANVMDT 147
+ + +YR+ GP E A L D A++W V D
Sbjct: 143 VLMGKPVIHVSMNYRVASWGFLAGPDIQNEGSGNAGLHDQRLAMQW----------VADN 192
Query: 148 WLG-EVDFDRVFVLGYSSGGNLAH-HLAVRFGPGSVELAPVRVRGYVLMSPFFGGCERTR 205
G D +V + G S+G HL G + P+ R ++ S GC
Sbjct: 193 IAGFGGDPSKVTIYGESAGSMSTFVHLVWNDGDNTYNGKPL-FRAAIMQS----GCMV-- 245
Query: 206 SEEERPIDGIWTLEMYDR 223
P+DG + E+Y++
Sbjct: 246 --PSDPVDGTYGTEIYNQ 261
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 30/145 (20%)
Query: 39 NSILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPN------- 91
+ L +D + L L ++ P S LP++ + +GG F G+ N
Sbjct: 66 QATLTQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLY 125
Query: 92 -NHNICVRLASILQAAVIEPDYRLGP-------EHRLPA--ALEDACCALKWLQGQAIMH 141
I R I V+ +YR+GP + LP L D A+ W++
Sbjct: 126 DGEEIATRGNVI----VVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRN---- 177
Query: 142 ANVMDTWLGEVDFDRVFVLGYSSGG 166
++ + G D D++ + G S+GG
Sbjct: 178 ---IEAFGG--DPDQITLFGESAGG 197
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 30/145 (20%)
Query: 39 NSILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPN------- 91
+ L +D + L L ++ P S LP++ + +GG F G+ N
Sbjct: 66 QATLTQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLY 125
Query: 92 -NHNICVRLASILQAAVIEPDYRLGP-------EHRLPA--ALEDACCALKWLQGQAIMH 141
I R I V+ +YR+GP + LP L D A+ W++
Sbjct: 126 DGEEIATRGNVI----VVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRN---- 177
Query: 142 ANVMDTWLGEVDFDRVFVLGYSSGG 166
++ + G D D + + G S+GG
Sbjct: 178 ---IEAFGG--DPDNITLFGESAGG 197
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt
Length = 611
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 145 MDTWLGEVDFDRVFVLGYSSGG-NLAHHLAVRFGPGSVELAPVRVRGYVLMSPFFGGCER 203
MD LG+ +R +V+GYSS HH A + + +P + YVL GG +
Sbjct: 425 MDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLKDANDSSPHK---YVLYGALVGGPDA 481
Query: 204 TRSEEERPIDGIWTLEMYDRN 224
+ +R D I+ D N
Sbjct: 482 SDQHVDRTNDYIYNEVAIDYN 502
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 39 NSILYKDLIFNENIDLRLRLYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICV- 97
+ L +D + L L ++ P S LP++ + +GG F G+ N + +
Sbjct: 66 QATLTQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLY 125
Query: 98 ---RLASILQAAVIEPDYRLGP-------EHRLPA--ALEDACCALKWLQGQAIMHANVM 145
+A+ V+ +YR+GP + LP L D A+ W++ +
Sbjct: 126 DGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRN-------I 178
Query: 146 DTWLGEVDFDRVFVLGYSSGG 166
+ + G D D + + G S+GG
Sbjct: 179 EAFGG--DPDNITLFGESAGG 197
>pdb|3L2E|A Chain A, Glycocyamine Kinase, Alpha-Beta Heterodimer From Marine
Worm Namalycastis Sp.
pdb|3L2E|C Chain C, Glycocyamine Kinase, Alpha-Beta Heterodimer From Marine
Worm Namalycastis Sp
Length = 374
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 122 AALEDACCALKWLQGQAIMHANVMD--TWLGEVDFDRVFVLGYSSGGNLAHHLAVRFGPG 179
A L + CA W G+ I H N + W+ E D RV + GG+L + RF G
Sbjct: 195 ALLTTSGCARDWPDGRGIWHNNEKNFLVWINEEDHIRVISM--QKGGDLKAVFS-RFARG 251
Query: 180 SVEL 183
+E+
Sbjct: 252 LLEV 255
>pdb|3L2D|A Chain A, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp.
pdb|3L2D|B Chain B, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp.
pdb|3L2D|C Chain C, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp.
pdb|3L2D|D Chain D, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp.
pdb|3L2E|B Chain B, Glycocyamine Kinase, Alpha-Beta Heterodimer From Marine
Worm Namalycastis Sp.
pdb|3L2E|D Chain D, Glycocyamine Kinase, Alpha-Beta Heterodimer From Marine
Worm Namalycastis Sp.
pdb|3L2F|A Chain A, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|B Chain B, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|C Chain C, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|D Chain D, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|E Chain E, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|F Chain F, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|G Chain G, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|H Chain H, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|I Chain I, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|J Chain J, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|K Chain K, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|L Chain L, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|M Chain M, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|N Chain N, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|O Chain O, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|P Chain P, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|Q Chain Q, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2F|R Chain R, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 1.
pdb|3L2G|A Chain A, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|B Chain B, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|C Chain C, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|D Chain D, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|E Chain E, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|F Chain F, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|G Chain G, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|H Chain H, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|I Chain I, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|J Chain J, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|K Chain K, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|L Chain L, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|M Chain M, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|N Chain N, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|O Chain O, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|P Chain P, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|Q Chain Q, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2.
pdb|3L2G|R Chain R, Glycocyamine Kinase, Beta-Beta Homodimer From Marine Worm
Namalycastis Sp., With Transition State Analog
Mg(Ii)-Adp-No3-Glycocyamine. Part 2
Length = 390
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 122 AALEDACCALKWLQGQAIMHANVMD--TWLGEVDFDRVFVLGYSSGGNLAHHLAVRFGPG 179
A L + CA W G+ I H N + W+ E D RV + GG+L + RF G
Sbjct: 211 ALLTTSGCARDWPDGRGIWHNNEKNFLVWINEEDHIRVISM--QKGGDLKAVFS-RFARG 267
Query: 180 SVEL 183
+E+
Sbjct: 268 LLEV 271
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 65/177 (36%), Gaps = 42/177 (23%)
Query: 58 LYKPTSIVNSSTKLPIVFYFHGGGFCFGSRTFPNNHNICVRLASILQAAVIEPDYRLGPE 117
L P + + S K P++ + HGG + G+ N LA+ V+ +YRLG
Sbjct: 125 LNPPDTDIRDSGKKPVMLFLHGGSYMEGT----GNMFDGSVLAAYGNVIVVTLNYRLGVL 180
Query: 118 HRLPA---------ALEDACCALKWLQGQAIMHANVMDTWLGEVDFDRVFVLGYSSGGN- 167
L L D AL+WL + I H D +R+ + G +G +
Sbjct: 181 GFLSTGDQAAKGNYGLLDQIQALRWL-SENIAHFG--------GDPERITIFGSGAGASC 231
Query: 168 -----LAHHLAVRFGPG-----------SVELAPVRVRGYVLMSPFFGGCERTRSEE 208
L+HH F SV P++ Y + GC+R S E
Sbjct: 232 VNLLILSHHSEGLFQKAIAQSGTAISSWSVNYQPLK---YTRLLAAKVGCDREDSTE 285
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.142 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,624,947
Number of Sequences: 62578
Number of extensions: 320036
Number of successful extensions: 675
Number of sequences better than 100.0: 51
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 617
Number of HSP's gapped (non-prelim): 51
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)