BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026702
(235 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
Length = 234
Score = 263 bits (673), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 170/238 (71%), Gaps = 7/238 (2%)
Query: 1 MSSPYNSNWIFDCGLLD-DIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAF 59
M SP N+NWI C L+D D G P P +SN SA + S GN +A
Sbjct: 1 MVSPENANWI--CDLIDADYGSFTIQGPGFSWPVQQPIGVSSNS--SAGVDGSAGNSEAS 56
Query: 60 KETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAV 119
KE GS+KR R S SA+ SKACREK RRDRLND+FMEL +IL+PG PPK DK +L DAV
Sbjct: 57 KEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAV 116
Query: 120 QMVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS-QP 178
+MVTQLR EAQKLK SN L KI ELK EKNELRDEKQRLK EKE LE+Q+KA+++ QP
Sbjct: 117 RMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQP 176
Query: 179 AFLPHPPPVPAPF-SAPGQVVGGKLVPLVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 235
+F P PP +P F SA GQ G K+VP++ YPGV+MWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 177 SFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234
>sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115
PE=2 SV=1
Length = 226
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/239 (53%), Positives = 160/239 (66%), Gaps = 17/239 (7%)
Query: 1 MSSPYNSNWIFDCGLLDDIGVSGGDLPSLDPPEVLWSSSTSNPPLSAEFNDSFGNLDAFK 60
M SP N+NW+ D L++ G P+ P + S+T +S E + + D K
Sbjct: 1 MVSPENTNWLSDYPLIE--GAFSDQNPTF--PWQIDGSAT----VSVEVDGFLCDADVIK 52
Query: 61 ETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQ 120
E SRKR+++ SC+ S SKACREK RRDRLND+F EL+S+L+PGR PK DK ++ DA++
Sbjct: 53 EPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIR 112
Query: 121 MVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS---- 176
MV Q RDEAQKLK N L KI ELK EKNELRDEKQ+LK EKE +++Q+KA+ +
Sbjct: 113 MVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQP 172
Query: 177 QPAFLPHPPPVPAPFSAPGQVVGGKLVPLVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 235
QP FLP+P + + Q G KLVP YPG +MWQFMPPAAVDTSQDHVLRPPVA
Sbjct: 173 QPCFLPNPQTL-----SQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA 226
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 123/174 (70%), Gaps = 11/174 (6%)
Query: 64 SRKRVRSGSCS-ASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMV 122
SRKR R+GSCS G+KACRE++RR++LN+RFM+L+S+L+PGR PK DK +L DA++++
Sbjct: 119 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRIL 178
Query: 123 TQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS-QPAFL 181
QLRDEA KL+ +N+KLL +I LK EKNELR+EK LK +KE E+Q+K++++ F+
Sbjct: 179 NQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFI 238
Query: 182 PHPPPVPAPFSAPGQVVGGKLVPLVGYPGVSMWQFMPPAAVDTSQDHVLRPPVA 235
PH +PA F+ V P GY + MW +MP + DTS+D LRPP A
Sbjct: 239 PH---IPAAFNHNKMAV----YPSYGY--MPMWHYMPQSVRDTSRDQELRPPAA 283
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2
SV=1
Length = 320
Score = 160 bits (405), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 123/181 (67%), Gaps = 7/181 (3%)
Query: 57 DAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLA 116
+ F+E S KR R+GSCS G+KACREK+RR++LND+FM+L+S+L+PGR PK DK+ +L
Sbjct: 145 EEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILD 204
Query: 117 DAVQMVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS 176
DA+++V QLR EA +L+ +N+KLL +I LK +KNELR+EK LK EKE +E+Q+K++
Sbjct: 205 DAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVV 264
Query: 177 -QPAFLPHPPPVPAPFSAPGQVVGGKLVPLVGY-PGVSMWQFMPPAAVDTSQDHVLRPPV 234
P F+P PA F + V P Y P + MW +PPA DTS+D PPV
Sbjct: 265 PSPGFMPSQH--PAAFHSHKMAVA---YPYGYYPPNMPMWSPLPPADRDTSRDLKNLPPV 319
Query: 235 A 235
A
Sbjct: 320 A 320
>sp|Q9LT23|BH121_ARATH Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121
PE=2 SV=1
Length = 337
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 25/172 (14%)
Query: 79 KACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEK 138
KA REK+RR++LN+ F+EL ++LDP RP K DK +L D VQ++ +L E KLK
Sbjct: 63 KAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTA 121
Query: 139 LLGKINELKCEKNELRDEKQRLKNEKENL----ERQVKALSSQPAFLPH----------- 183
L + EL EKN+LR+EK LK++ ENL +++++++S A + H
Sbjct: 122 LTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFP 181
Query: 184 --------PPPVPAPFSAPGQVVGGKLVP-LVGYPGVSMWQFMPPAAVDTSQ 226
P +P S P G P ++ P + +MPP V Q
Sbjct: 182 YPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQ 233
>sp|Q8W2F2|BH011_ARATH Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2
SV=2
Length = 286
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 6/129 (4%)
Query: 69 RSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDE 128
+ CS KA REK+RRD+L ++F+EL + LDP RP K DK +L D +QM+ + ++
Sbjct: 42 KEAVCS---QKAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQ 97
Query: 129 AQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKA-LSSQPAFLPHPPPV 187
+LK E L + EL EK+ELR+EK LK++ E L Q + + + ++PH
Sbjct: 98 VDRLKAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWVPH-YSY 156
Query: 188 PAPFSAPGQ 196
PF A Q
Sbjct: 157 HIPFVAITQ 165
>sp|Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2
SV=1
Length = 240
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 66 KRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQL 125
+R R G +KA RE+++R+ LN+ F+ELA L+ + K +L +A + + +
Sbjct: 19 ERCRKGKVPKRINKAVRERLKREHLNELFIELADTLELNQQ-NSGKASILCEATRFLKDV 77
Query: 126 RDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSSQPAFLPHPP 185
+ + L+ + LL + + + EKNEL++E L+ E L+ +++A ++Q P
Sbjct: 78 FGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEARANQSK--PDLN 135
Query: 186 PVPAP--------FSAPGQVVGGKLVPLVGYPGV--SMWQFMPPAAV 222
PAP P +V +P+ PG S PPA V
Sbjct: 136 TSPAPEYHHHHYQQQHPERVSQFPGLPIFQGPGFQQSATTLHPPATV 182
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGK 142
E+MRR++LN RF L +++ KMDKT LL DAV + +L+ +A+ +++ + +
Sbjct: 348 ERMRREKLNHRFYALRAVVP--NVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIEIQ 405
Query: 143 INELK 147
NELK
Sbjct: 406 FNELK 410
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGK 142
E+ RR++LN RF L +++ P KMDK LL DA+ +++L+ + QK + E+L +
Sbjct: 421 ERQRREKLNQRFYSLRAVV-P-NVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQ 478
Query: 143 INELKCE----KNELRDEK 157
I+ + E K+ ++D K
Sbjct: 479 IDVMNKEAGNAKSSVKDRK 497
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGK 142
E+ RR++LN RF L +++ P KMDK LL DA+ + +L+ + Q+ + E++ K
Sbjct: 420 ERQRREKLNQRFYSLRAVV-P-NVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKK 477
Query: 143 INELKCEKNELRDEKQRLKNEK 164
++ + E N + R K K
Sbjct: 478 LDGMSKEGNNGKGCGSRAKERK 499
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 76 SGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVS 135
+G+ A EK RR++LN+RFM L SI+ K+DK +L D ++ + L+ Q+L+
Sbjct: 403 TGNHALSEKKRREKLNERFMTLRSIIPS--ISKIDKVSILDDTIEYLQDLQKRVQELESC 460
Query: 136 NE 137
E
Sbjct: 461 RE 462
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGK 142
E+ RR++LN RF L +++ KMDK LL DA+ + +L+ + K + ++ +
Sbjct: 457 ERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQ 514
Query: 143 INELKCE 149
+ E+K E
Sbjct: 515 LEEVKLE 521
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKL---KVSNEKL 139
E+ RR++LN RF L S++ KMDK LL DA+ + +L+++ + + +V +K
Sbjct: 400 ERQRREKLNQRFYALRSVVP--NISKMDKASLLGDAISYIKELQEKVKIMEDERVGTDKS 457
Query: 140 LGKINELKCEKNELRDEKQRLKNEKENLERQVKALSSQPA 179
L + N + E++ D + +E + R + L S PA
Sbjct: 458 LSESNTITVEESPEVDIQAM---NEEVVVRVISPLDSHPA 494
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 67 RVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLR 126
R SG + E+ RR++LN+ F L S+L PG K DK +L+ A + ++ L+
Sbjct: 278 RYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPG--TKKDKASVLSIAREQLSSLQ 335
Query: 127 DEAQKLKVSNEKLLGKINELKCEKNELRDEKQ 158
E KL N ++ K+ + +N+LR E++
Sbjct: 336 GEISKLLERNREVEAKLAGEREIENDLRPEER 367
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 76 SGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVS 135
+G+ A EK RR++LN+RFM L I+ K+DK +L D ++ + +L Q+L+
Sbjct: 439 TGNHAVLEKKRREKLNERFMTLRKIIPS--INKIDKVSILDDTIEYLQELERRVQELESC 496
Query: 136 NE 137
E
Sbjct: 497 RE 498
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLK 133
E+ RR +LNDR L S++ R K+D+ +L DA+ V +L++EA++L+
Sbjct: 319 ERRRRKKLNDRLYALRSLV--PRITKLDRASILGDAINYVKELQNEAKELQ 367
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKL 139
E+ RR++LN RF L S++ KMDK LL DAV + +L + + ++ E+L
Sbjct: 438 ERQRREKLNQRFYALRSVVP--NISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
PE=4 SV=1
Length = 912
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 61 ETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQ 120
ETG+ KR RS S ++ ++ + RR R++DRF L S++ G KMD +L +A+
Sbjct: 30 ETGNTKRSRSTSTLSTDPQSVAARDRRHRISDRFKILQSMVPGG--AKMDTVSMLDEAIS 87
Query: 121 MVTQLR 126
V L+
Sbjct: 88 YVKFLK 93
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 38.9 bits (89), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKL 139
EK RR++LN RF L +I+ + +MDK LL+DAV + L+ + L+ +K+
Sbjct: 254 EKQRREKLNHRFYALRAIVP--KVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKM 308
>sp|Q9FXA3|BH095_ARATH Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2
SV=2
Length = 308
Score = 38.5 bits (88), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSN-EKL 139
E+ RR ++ D F +L ++L P PPK DK+ ++ +AV + L QKL++ EKL
Sbjct: 78 ERERRKKMRDMFSKLHALL-PQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKL 134
>sp|Q8CPC5|SBCC_STAES Nuclease SbcCD subunit C OS=Staphylococcus epidermidis (strain ATCC
12228) GN=sbcC PE=3 SV=1
Length = 1009
Score = 38.1 bits (87), Expect = 0.053, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 16/70 (22%)
Query: 124 QLRDEAQKLKVSNEKLLGKINELKCEK----------------NELRDEKQRLKNEKENL 167
++RDE K++ E+L + NEL CEK N+L+DE+Q + EN
Sbjct: 553 KIRDEIIKIETRIEELNHRENELNCEKQEKKDISKLQKQLNHLNQLKDEQQSINKLVENF 612
Query: 168 ERQVKALSSQ 177
E+Q K + ++
Sbjct: 613 EKQEKEIVNK 622
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 38.1 bits (87), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKV-SNEKLLG 141
E+ RR++LN RF L +++ KMDK LLADA+ +T D +K++V EK +
Sbjct: 325 ERQRREKLNQRFYALRAVVP--NISKMDKASLLADAITYIT---DMQKKIRVYETEKQIM 379
Query: 142 KINE 145
K E
Sbjct: 380 KRRE 383
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLK 133
E+ RR +LN+R + L+++L PG K DK +L DA++ + QL++ +KL+
Sbjct: 137 ERKRRQKLNERLIALSALL-PG-LKKTDKATVLEDAIKHLKQLQERVKKLE 185
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 37.7 bits (86), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 78 SKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNE 137
S E+ RR++LN++F+ L S++ P KMDK +L D + V LR +L+ ++
Sbjct: 363 SHVVAERRRREKLNEKFITLRSMV-PF-VTKMDKVSILGDTIAYVNHLRKRVHELENTHH 420
Query: 138 K 138
+
Sbjct: 421 E 421
>sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2
Length = 2245
Score = 37.4 bits (85), Expect = 0.087, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 120 QMVTQLRDEAQKLKV-------SNEK---LLGKINELKCEKNELRDEKQRLKNEKENLER 169
Q+ +L D KL++ SNEK L GK+ E + EK +L+ E +R+K K+++E
Sbjct: 1239 QLELELTDHKSKLQIQLQLTEQSNEKIKKLKGKLEEYQDEKKQLQQELERIKQSKQSVED 1298
Query: 170 QVKALSSQ 177
+ +L +Q
Sbjct: 1299 EKNSLITQ 1306
>sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3
Length = 1976
Score = 37.4 bits (85), Expect = 0.10, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 117 DAVQMVTQLRDEAQKLKVSNEKLL---GKINELKCEKNELRDEKQRLKNEKENLERQVKA 173
DA + +QL+D + L+ + L +I +L+ EKN L+++++ + ++NLE+QV A
Sbjct: 1309 DAASLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLA 1368
Query: 174 LSSQPA 179
L SQ A
Sbjct: 1369 LQSQLA 1374
>sp|Q9JLT0|MYH10_RAT Myosin-10 OS=Rattus norvegicus GN=Myh10 PE=1 SV=1
Length = 1976
Score = 37.0 bits (84), Expect = 0.12, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 86 RRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLL---GK 142
+ ++L + ++++L+ M DA + +QL+D + L+ + L +
Sbjct: 1281 KANKLQNELDNVSTLLEEAEKKGMK---FAKDAAGLESQLQDTQELLQEETRQKLNLSSR 1337
Query: 143 INELKCEKNELRDEKQRLKNEKENLERQVKALSSQPA 179
I +L+ EKN L+++++ + ++NLE+QV AL SQ A
Sbjct: 1338 IRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLA 1374
>sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2
Length = 1976
Score = 36.6 bits (83), Expect = 0.15, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 117 DAVQMVTQLRDEAQKLKVSNEKLL---GKINELKCEKNELRDEKQRLKNEKENLERQVKA 173
DA + +QL+D + L+ + L +I +L+ EKN L+++++ + ++NLE+QV A
Sbjct: 1309 DAAGLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLA 1368
Query: 174 LSSQPA 179
L SQ A
Sbjct: 1369 LQSQLA 1374
>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
SV=1
Length = 262
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 55 NLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTV- 113
N++ E RVR+ A+ ++ E++RR R++DR +L ++ P MDK
Sbjct: 171 NMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELV-----PNMDKQTN 225
Query: 114 ---LLADAVQMVTQLRDEAQKL 132
+L +AV+ V L+ + Q+L
Sbjct: 226 TADMLEEAVEYVKVLQRQIQEL 247
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 73 CSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKL 132
C A+ EK RR R+N++ L S++ K DK +L +A++ + QL+ + Q L
Sbjct: 196 CRAAEVHNLSEKRRRSRINEKMKALQSLIPNSN--KTDKASMLDEAIEYLKQLQLQVQML 253
Query: 133 KVSN 136
+ N
Sbjct: 254 TMRN 257
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLK 133
E+ RR R+ D+ L S++ KMDK ++ DAV V +L+ +A+KLK
Sbjct: 136 ERRRRGRMKDKLYALRSLV--PNITKMDKASIVGDAVLYVQELQSQAKKLK 184
>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
SV=1
Length = 259
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 55 NLDAFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTV- 113
N+D E RVR+ A+ ++ E++RR R++DR L ++ P MDK
Sbjct: 168 NMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELV-----PNMDKQTN 222
Query: 114 ---LLADAVQMVTQLRDEAQKL 132
+L +AV+ V L+ + Q+L
Sbjct: 223 TADMLEEAVEYVKALQSQIQEL 244
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNE 137
E+ RR++L+++F+ L+++L PG K DK +L DA+ + QL+++ + LK E
Sbjct: 124 ERKRREKLSEKFIALSALL-PG-LKKADKVTILDDAISRMKQLQEQLRTLKEEKE 176
>sp|P39083|RGA1_YEAST Rho-type GTPase-activating protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RGA1 PE=1 SV=1
Length = 1007
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
Query: 107 PKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKEN 166
P +DK ++ A+ + QL+ ++L+ E+L+ +I E+K K LR + +EK
Sbjct: 599 PSLDKEIVTAE--HYLKQLKINLKELESQREELMKEITEMKSMKEALRRHIESYNSEKNK 656
Query: 167 LERQVKALSSQPAF-----LPHPPPVPAPFSAPGQVVGGKLVPLVGYPGVSMWQFMPPAA 221
L LS+ P L PPV +A V + P W+F A
Sbjct: 657 LYLDSNELSNNPPMINEISLGESPPVKHVATA-SSVARSSVKP-------KFWKFFSSAK 708
Query: 222 VDTSQ 226
T Q
Sbjct: 709 PQTEQ 713
>sp|Q8VDD5|MYH9_MOUSE Myosin-9 OS=Mus musculus GN=Myh9 PE=1 SV=4
Length = 1960
Score = 35.8 bits (81), Expect = 0.26, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 88 DRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLG---KIN 144
D++ +EL S+ + L D + +QL+D + L+ N + L K+
Sbjct: 1273 DKVTKLQVELDSVTGLLSQSDSKSSKLTKDFSALESQLQDTQELLQEENRQKLSLSTKLK 1332
Query: 145 ELKCEKNELRDEKQRLKNEKENLERQVKALSSQ 177
+++ EKN R++ + + K NLE+Q+ L +Q
Sbjct: 1333 QMEDEKNSFREQLEEEEEAKRNLEKQIATLHAQ 1365
Score = 31.6 bits (70), Expect = 5.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 111 KTVLLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQ 170
K L +A Q+++ QK + E+L ++ + K K L KQ L+NE+ L +
Sbjct: 1173 KKTLEDEAKTHEAQIQEMRQKHSQAVEELADQLEQTKRVKATLEKAKQTLENERGELANE 1232
Query: 171 VKAL 174
VKAL
Sbjct: 1233 VKAL 1236
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 35.8 bits (81), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 66 KRVRSGSCSASGSK--ACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVT 123
KR +S + S S ++ E+ RR++L RF+ L++++ PG KMDK +L DA++ +
Sbjct: 112 KRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALI-PGLK-KMDKASVLGDAIKHIK 169
Query: 124 QLRD 127
L++
Sbjct: 170 YLQE 173
>sp|O34549|YLBO_BACSU Uncharacterized protein YlbO OS=Bacillus subtilis (strain 168)
GN=ylbO PE=4 SV=1
Length = 193
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 115 LADAVQMVTQLRD--EAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVK 172
+ D +Q + Q ++ AQ+ ++ EKL +I L+ E +LR E Q L+N+ E E K
Sbjct: 106 IQDVIQFLEQFKETPSAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMTEEDYK 165
Query: 173 AL 174
AL
Sbjct: 166 AL 167
>sp|P35579|MYH9_HUMAN Myosin-9 OS=Homo sapiens GN=MYH9 PE=1 SV=4
Length = 1960
Score = 35.4 bits (80), Expect = 0.33, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 114 LLADAVQMVTQLRDEAQKLKVSNEKLLG---KINELKCEKNELRDEKQRLKNEKENLERQ 170
L D + +QL+D + L+ N + L K+ +++ EKN R++ + + K NLE+Q
Sbjct: 1299 LTKDFSALESQLQDTQELLQEENRQKLSLSTKLKQVEDEKNSFREQLEEEEEAKHNLEKQ 1358
Query: 171 VKALSSQPA 179
+ L +Q A
Sbjct: 1359 IATLHAQVA 1367
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 35.4 bits (80), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 57 DAFKETGSRKRVRSGSCSASGSK--ACREKMRRDRLNDRFMELASILDPGRPPKMDKTVL 114
D F G+ KR + S + S ++ E+ RR++L RF+ L++++ PG KMDK +
Sbjct: 130 DEFNRKGT-KRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALV-PGLK-KMDKASV 186
Query: 115 LADAVQMVTQLRDEAQKLK 133
L DA++ + L++ +L+
Sbjct: 187 LGDALKHIKYLQERVGELE 205
>sp|Q5ZQU2|NPAS2_CHICK Neuronal PAS domain-containing protein 2 OS=Gallus gallus GN=NPAS2
PE=2 SV=1
Length = 815
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 77 GSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEAQKLKVS 135
S+ EK RRD+ N EL+S+L PG KMDKT +L + + + + + + ++S
Sbjct: 12 ASRNKSEKKRRDQFNVLIKELSSML-PGNTRKMDKTTVLEKVIGFLQKHNEVSAQTEIS 69
>sp|P51834|SMC_BACSU Chromosome partition protein Smc OS=Bacillus subtilis (strain 168)
GN=smc PE=1 SV=3
Length = 1186
Score = 35.4 bits (80), Expect = 0.38, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 114 LLADAVQMVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQV 171
L A+ Q+ Q++++ Q L + NE + KI +LK + EL + + ++NE + L+ Q+
Sbjct: 349 LQAEVKQLRAQVKEKQQALSLHNENVEEKIEQLKSDYFELLNSQASIRNELQLLDDQM 406
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 71 GSCSASGSK-ACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRDEA 129
G+ S+ SK E+ RR +LN R L S++ P KMDK ++ DA+ + L+ E
Sbjct: 47 GAASSPASKNIVSERNRRQKLNQRLFALRSVV-PN-ITKMDKASIIKDAISYIEGLQYEE 104
Query: 130 QKLK 133
+KL+
Sbjct: 105 KKLE 108
>sp|O75030|MITF_HUMAN Microphthalmia-associated transcription factor OS=Homo sapiens
GN=MITF PE=1 SV=2
Length = 526
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKM--DKTVLLADAVQMVTQLRDEAQ---------- 130
E+ RR +NDR EL +++ P M +K +L +V + +L+ E Q
Sbjct: 320 ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKELENRQK 379
Query: 131 KLKVSNEKLLGKINELKCE 149
KL+ +N LL +I EL+ +
Sbjct: 380 KLEHANRHLLLRIQELEMQ 398
>sp|P12753|RAD50_YEAST DNA repair protein RAD50 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD50 PE=1 SV=1
Length = 1312
Score = 35.0 bits (79), Expect = 0.42, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 117 DAVQMVTQLRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSS 176
D +Q V +LRD+ +K+ S +L I++L+ EK+E E R+ N + E V + S
Sbjct: 828 DGIQTVDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKEKELTVSEIES 887
>sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3
Length = 1972
Score = 35.0 bits (79), Expect = 0.43, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 58 AFKETGSRKRVRSGSCSASGSKACREKMRRDRLNDRFMELASILDP---------GRPPK 108
A +E +K+ SK + R LND+ +L + ++ G+ K
Sbjct: 1246 AKQEVEHKKKKLEAQVQELQSKCSDGERARAELNDKVHKLQNEVESVTGMLNEAEGKAIK 1305
Query: 109 MDKTVLLADAVQMVTQLRDEAQKLKVSNEKLLG---KINELKCEKNELRDEKQRLKNEKE 165
+ K D + +QL+D + L+ + L K+ +L+ E+N L+D+ K+
Sbjct: 1306 LAK-----DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQ 1360
Query: 166 NLERQVKALSSQ 177
NLER + L+ Q
Sbjct: 1361 NLERHISTLNIQ 1372
>sp|Q08874|MITF_MOUSE Microphthalmia-associated transcription factor OS=Mus musculus
GN=Mitf PE=1 SV=3
Length = 526
Score = 34.7 bits (78), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 83 EKMRRDRLNDRFMELASILDPGRPPKM--DKTVLLADAVQMVTQLRDEAQ---------- 130
E+ RR +NDR EL +++ P M +K +L +V + +L+ E Q
Sbjct: 320 ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDLENRQK 379
Query: 131 KLKVSNEKLLGKINELKCE 149
KL+ +N LL ++ EL+ +
Sbjct: 380 KLEHANRHLLLRVQELEMQ 398
>sp|Q863A3|MYOC_MACFA Myocilin OS=Macaca fascicularis GN=MYOC PE=3 SV=1
Length = 491
Score = 34.3 bits (77), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 125 LRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSSQPAFL 181
LR E +L+ +L + L +K+ L +EK+RL+ E ENL R++++ S + A L
Sbjct: 111 LRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARRLESSSQEVARL 167
>sp|Q99972|MYOC_HUMAN Myocilin OS=Homo sapiens GN=MYOC PE=1 SV=2
Length = 504
Score = 34.3 bits (77), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 125 LRDEAQKLKVSNEKLLGKINELKCEKNELRDEKQRLKNEKENLERQVKALSSQPAFL 181
LR E +L+ +L + L +K+ L +EK+RL+ E ENL R++++ S + A L
Sbjct: 124 LRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQENENLARRLESSSQEVARL 180
>sp|O08638|MYH11_MOUSE Myosin-11 OS=Mus musculus GN=Myh11 PE=1 SV=1
Length = 1972
Score = 34.3 bits (77), Expect = 0.72, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 114 LLADAVQMVTQLRDEAQKLKVSNEKLLG---KINELKCEKNELRDEKQRLKNEKENLERQ 170
L D + +QL+D + L+ + L K+ +L+ E+N L+D+ K+NLER
Sbjct: 1306 LAKDVASLGSQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQDQLDEEMEAKQNLERH 1365
Query: 171 VKALSSQ 177
V L+ Q
Sbjct: 1366 VSTLNIQ 1372
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 68 VRSGSCSASGSKACREKMRRDRLNDRFMELASILDPGRPPKMDKTVLLADAVQMVTQLRD 127
R G S + E+ RR NDRF +L +++ P K+D+ ++ +A+ + +L
Sbjct: 237 TRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIP--NPTKIDRASIVGEAIDYIKELLR 294
Query: 128 EAQKLKVSNEK 138
++ K+ EK
Sbjct: 295 TIEEFKMLVEK 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,734,066
Number of Sequences: 539616
Number of extensions: 4246026
Number of successful extensions: 23111
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 490
Number of HSP's that attempted gapping in prelim test: 21574
Number of HSP's gapped (non-prelim): 1916
length of query: 235
length of database: 191,569,459
effective HSP length: 114
effective length of query: 121
effective length of database: 130,053,235
effective search space: 15736441435
effective search space used: 15736441435
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)