BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026703
(234 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q92609|TBCD5_HUMAN TBC1 domain family member 5 OS=Homo sapiens GN=TBC1D5 PE=1 SV=1
Length = 795
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 28/162 (17%)
Query: 11 RSTVWKLLLVYLPPDRGLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDKSTIYESEEWK 70
RS WKL L LP D+ W S + + R+ Y + K+ + NP ++ + D
Sbjct: 87 RSICWKLFLCVLPQDKSQWISRIEELRAWYSNIKEIHITNPRKVVGQQDLMI-------- 138
Query: 71 CESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMHFFSGDSSF 130
+PLS + S+WN+FFQD E+ I++DVKRT P+M FF ++
Sbjct: 139 ---------------NNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQENV- 182
Query: 131 ATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSD 172
++ L ++L +A+ N + Y QGM+E+LAP+ +V D
Sbjct: 183 ----RKILTDVLFCYARENEQLLYKQGMHELLAPIVFVLHCD 220
>sp|Q9URY3|YLOH_SCHPO TBC domain-containing protein C1952.17c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1952.17c PE=4
SV=4
Length = 619
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 73/128 (57%), Gaps = 20/128 (15%)
Query: 1 MQGIPDGAGIRSTVWKLLLVYLPPDRGLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDK 60
+QGIPD +R+ W L+L +LP DR W S L K R Y F +LL++P R+L
Sbjct: 30 IQGIPDEYSLRAKAWMLMLEFLPTDRSNWQSVLEKHRKTYTSFVQELLIDP---WRKL-- 84
Query: 61 STIYESEEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPD 120
T++E SG + +HPL+ S W ++F D++I+EQID+D++RT PD
Sbjct: 85 -TLHEE-------SG-------ENSDHPLNTSDDSKWKEYFDDNQILEQIDKDIRRTLPD 129
Query: 121 MHFFSGDS 128
+ FF G S
Sbjct: 130 LSFFQGKS 137
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 113 DVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSD 172
D KRT + +G++ ++EA + IL ++AKLNPGI YVQGMNEILAPLYYV +D
Sbjct: 229 DSKRT-INAEAIAGENKLGL-HREAAERILFIYAKLNPGIGYVQGMNEILAPLYYVLATD 286
Query: 173 P 173
P
Sbjct: 287 P 287
>sp|Q80XQ2|TBCD5_MOUSE TBC1 domain family member 5 OS=Mus musculus GN=Tbc1d5 PE=1 SV=2
Length = 815
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 11 RSTVWKLLLVYLPPDRGLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDKSTIYESEEWK 70
RS WKL L LP D+ W S++ + R+ Y K+ + NP + + D
Sbjct: 87 RSICWKLFLCVLPQDKSQWISKIKELRAWYSSIKEIHITNPRKAAGQQDLMI-------- 138
Query: 71 CESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMHFFSGDSSF 130
+PLS + S+WN+FFQD E+ I++DVKRT P+M FF ++
Sbjct: 139 ---------------NNPLSQDEGSLWNKFFQDKELRSMIEQDVKRTFPEMQFFQQENV- 182
Query: 131 ATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSD 172
++ L ++L +A+ N + Y QGM+E+LAP+ + D
Sbjct: 183 ----RKILTDVLFCYARENEQLLYKQGMHELLAPIIFTLHCD 220
>sp|Q9NVG8|TBC13_HUMAN TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3
Length = 400
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 17/128 (13%)
Query: 3 GIPDGAGIRSTVWKLLLVYLPPDRGLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDKST 62
GIP G+R WK+LL YLP +R W S LAK+R Y F ++++ P
Sbjct: 33 GIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRELYAQFLREMIIQPG---------- 82
Query: 63 IYESEEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMH 122
+++ +SR ++T ++HPL+ S WN +F+D+E++ QID+DV+R PD+
Sbjct: 83 -------IAKANMGVSREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDIS 135
Query: 123 FFSGDSSF 130
FF + +
Sbjct: 136 FFQRATDY 143
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 136 EALKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSDPDEEFSGFSFAFGARSFGGL 192
E ++ IL ++AKLNPGI YVQGMNEI+ PLYY F +DP+ E+ + A F L
Sbjct: 209 EVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNL 265
>sp|Q54VM3|TBC5A_DICDI TBC1 domain family member 5 homolog A OS=Dictyostelium discoideum
GN=tbc1d5A PE=1 SV=1
Length = 1173
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 11/170 (6%)
Query: 3 GIPDGAGIRSTVWKLLLVYLPPDRGLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDKST 62
G+P +RS W++ L L D W R +Y+ FK + ++NP ++ D
Sbjct: 372 GLPKDTTVRSIFWRIALGTLSKDPTTWVERTNSSRKKYETFKKNYIINPRN-SKDQDADL 430
Query: 63 IYESEEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMH 122
+ + R ++ + PLS + S+WNQFF + +I D+ RT+P +
Sbjct: 431 QQ-----QQQQQQQQQRKPVSLIDDPLSQSEDSLWNQFFDNENAQREISHDISRTYPGLG 485
Query: 123 FFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSD 172
FF Q+ + IL +F+K P I+Y+QGMNEILAP+ Y +D
Sbjct: 486 FFE-----RLDIQDIMIRILFIFSKQYPKIKYLQGMNEILAPILYSVYND 530
>sp|Q8R3D1|TBC13_MOUSE TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1
Length = 400
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 17/128 (13%)
Query: 3 GIPDGAGIRSTVWKLLLVYLPPDRGLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDKST 62
GIP G+R WK+LL YLP +R W S LAK+R Y F ++++ P
Sbjct: 33 GIPCEGGLRCLCWKILLNYLPLERASWTSILAKQRGLYSQFLREMIIQPG---------- 82
Query: 63 IYESEEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMH 122
+++ + R ++T ++HPL+ S WN +F+D+E++ QID+DV+R PD+
Sbjct: 83 -------IAKANMGVFREDVTFEDHPLNPNPDSRWNTYFKDNEVLLQIDKDVRRLCPDIS 135
Query: 123 FFSGDSSF 130
FF + +
Sbjct: 136 FFQRATEY 143
>sp|Q54TA5|TBC5B_DICDI TBC1 domain family member 5 homolog B OS=Dictyostelium discoideum
GN=tbc1d5B PE=3 SV=1
Length = 1016
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 38/174 (21%)
Query: 8 AGIRSTVWKLLLVYLPPDR-GLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDKSTIYES 66
+ +R WKL L L +R W ++ ++R +Y+ K++ +P
Sbjct: 283 SPLRGIAWKLFLGGLDINRVDKWERDITQQRKRYEKLKEEHCFDPR-------------- 328
Query: 67 EEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMHFFSG 126
S T+D PLS S WN+FF++ + + I D++RTHPD FFS
Sbjct: 329 ------------NSNSTYD--PLSQNDDSPWNKFFKNLDTQKIIKIDLERTHPDNDFFSN 374
Query: 127 DSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSDPDEEFSGF 180
+E + IL V++K N I Y QGM+E+LAP+ Y++ ++E+S +
Sbjct: 375 PVI-----REMMATILFVYSKTNGIISYRQGMHELLAPIIYLY----NQEYSSY 419
>sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1
Length = 767
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 110 IDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPL 165
+D+DV RT + FF G+ + N E+++ IL+ +A NP + Y QGM++++AP+
Sbjct: 488 VDKDVVRTDRNNQFFRGEDN---PNVESMRRILLNYAVYNPAVGYSQGMSDLVAPI 540
>sp|Q6FWI1|GYP7_CANGA GTPase-activating protein GYP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GYP7 PE=3 SV=1
Length = 745
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 21/93 (22%)
Query: 109 QIDRDVKRTHPDMHFFSGDSS------------------FATSNQEALKNILIVFAKLNP 150
+I++DVKR ++ + ++S N + L +IL + NP
Sbjct: 456 RIEKDVKRNDRNIDIYKYNTSDNLPFPEDTAPTTDDDDSIKNPNLKKLADILTTYNIFNP 515
Query: 151 GIRYVQGMNEILAPLYYVFKSDPDEEFSGFSFA 183
+ YVQGM ++L+PLYY+ + DEE + + F
Sbjct: 516 NLGYVQGMTDLLSPLYYIIR---DEETTFWCFT 545
>sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp7 PE=3 SV=1
Length = 743
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 13/85 (15%)
Query: 101 FQDSEIMEQ---IDRDVKRTHPDMHFFSGD--------SSFATSNQ--EALKNILIVFAK 147
F D +EQ I++DV RT +F + S+F +N E +K+IL+ + +
Sbjct: 463 FNDRWFIEQRNRIEKDVHRTDRQHEYFQIEDLPHPDPQSTFTGTNMNMEMMKDILLTYNE 522
Query: 148 LNPGIRYVQGMNEILAPLYYVFKSD 172
+ + YVQGM+++LAP+Y F +
Sbjct: 523 YDTELGYVQGMSDLLAPIYVTFNDN 547
>sp|P09379|GYP7_YARLI GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GYP7 PE=3 SV=2
Length = 730
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 22/95 (23%)
Query: 98 NQFFQDSEIMEQIDRDVKRTHPDMHFFS------------------GDSSFATSNQE--A 137
+ F++D + +I++DV RT ++ FF+ G SS SN
Sbjct: 441 DDFWRDQ--LSRIEKDVHRTDRNITFFAECDAKKDGDDDNYDKDEFGFSSQINSNIHLIQ 498
Query: 138 LKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSD 172
L+++LI + + N + YVQGM+++L+PLY V + D
Sbjct: 499 LRDMLITYNQHNKNLGYVQGMSDLLSPLYVVLQDD 533
>sp|Q09830|YAD4_SCHPO TBC domain-containing protein C4G8.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC4G8.04 PE=1 SV=1
Length = 772
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 103 DSEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEIL 162
+S + QID D+ RT FF G L+ IL+ +++ NP I Y QGMN I
Sbjct: 540 ESASVAQIDMDINRTMAKNVFFGGKGP----GIPKLRRILVAYSRHNPHIGYCQGMNVIG 595
Query: 163 APLYYVFKSDPD 174
A L ++ S+ D
Sbjct: 596 AFLLLLYASEED 607
>sp|Q80U12|SGSM2_MOUSE Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2
SV=2
Length = 1005
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 107 MEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLY 166
+ +ID+DV+R + +F+ TSN E L++I+ + + + YVQGM ++LAPL
Sbjct: 793 LHRIDKDVQRCDRNYWYFT------TSNLERLRDIMCSYVWEHLDMGYVQGMCDLLAPLL 846
Query: 167 YVFKSD 172
+ +D
Sbjct: 847 VILDND 852
>sp|A6QP29|TBD2A_BOVIN TBC1 domain family member 2A OS=Bos taurus GN=TBC1D2 PE=2 SV=1
Length = 925
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 109 QIDRDVKRTHPD-MHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
QI+ D+ RT P+ HF SSF + L+ +L+ F+ NP I Y QG+N + A
Sbjct: 666 QIELDLNRTFPNNKHFTCPTSSFP----DKLRRVLLAFSWQNPTIGYCQGLNRLAAIALL 721
Query: 168 VFKSDPDEEFSGF 180
V DEE S F
Sbjct: 722 VL----DEEESAF 730
>sp|Q08484|GYP1_YEAST GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP1 PE=1 SV=1
Length = 637
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 75 GFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMHFFSGDSSFATSN 134
GFL R E+ SL K + +Q +D QI+ D+ RT+P + + S
Sbjct: 306 GFLQRK---RKEYRDSL-KHTFSDQHSRDIPTWHQIEIDIPRTNPHIPLYQFKSV----- 356
Query: 135 QEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
Q +L+ IL ++A +P YVQG+N+++ P + F
Sbjct: 357 QNSLQRILYLWAIRHPASGYVQGINDLVTPFFETF 391
>sp|Q6PBU5|GRT1A_DANRE Growth hormone-regulated TBC protein 1-A OS=Danio rerio GN=grtp1a
PE=2 SV=1
Length = 356
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 103 DSEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEIL 162
+ ++ E I D+ RT PD +F S Q+AL N+L+ + N + Y QGMN I
Sbjct: 123 EPKLEESIRTDLHRTFPDNIYFR--KSAEPCLQQALYNVLVAYGHHNKAVGYCQGMNFIA 180
Query: 163 APLYYVFKSDPDEEFS 178
L V K DEE S
Sbjct: 181 GYLILVSK---DEETS 193
>sp|Q9BYX2|TBD2A_HUMAN TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3
Length = 928
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 109 QIDRDVKRTHPD-MHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
QI+ D+ RT P+ HF SSF + L+ +L+ F+ NP I Y QG+N + A
Sbjct: 669 QIELDLNRTFPNNKHFTCPTSSFP----DKLRRVLLAFSWQNPTIGYCQGLNRLAAIALL 724
Query: 168 VFKSDPDEEFSGF 180
V +EE S F
Sbjct: 725 VL----EEEESAF 733
>sp|Q9NU19|TB22B_HUMAN TBC1 domain family member 22B OS=Homo sapiens GN=TBC1D22B PE=1 SV=3
Length = 505
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 109 QIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYV 168
QI D+ RT+P + F QE + IL ++A +P YVQG+N+++ P + V
Sbjct: 267 QIHIDIPRTNPLIPLFQQPLV-----QEIFERILFIWAIRHPASGYVQGINDLVTPFFVV 321
Query: 169 FKSDPDEE 176
F S+ EE
Sbjct: 322 FLSEYVEE 329
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 110 IDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
I+RDV RT F+ G + L +IL+ + + + YVQGM+++L+P+ YV
Sbjct: 375 IERDVSRTDRTNKFYEGPENPGLG---LLNDILLTYCMYHFDLGYVQGMSDLLSPILYVI 431
Query: 170 KSDPDE--EFSGF 180
+++ D F GF
Sbjct: 432 QNEVDAFWCFCGF 444
>sp|Q95LL3|TB22B_MACFA TBC1 domain family member 22B OS=Macaca fascicularis GN=TBC1D22B
PE=2 SV=1
Length = 505
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 109 QIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYV 168
QI D+ RT+P + F QE + IL ++A +P YVQG+N+++ P + V
Sbjct: 267 QIHIDIPRTNPLIPLFQQPLV-----QEIFERILFIWAIRHPASGYVQGINDLVTPFFVV 321
Query: 169 FKSDPDEE 176
F S+ EE
Sbjct: 322 FLSEYVEE 329
>sp|O95759|TBCD8_HUMAN TBC1 domain family member 8 OS=Homo sapiens GN=TBC1D8 PE=1 SV=3
Length = 1140
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 90 SLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLN 149
SLGK + + E+I+RD+ R+ P+ F ++ A AL+ +L +A N
Sbjct: 539 SLGKCCL---------VTEEIERDLHRSLPEHPAFQNETGIA-----ALRRVLTAYAHRN 584
Query: 150 PGIRYVQGMNEILAPLYYVFKSD 172
P I Y Q MN + + L K +
Sbjct: 585 PKIGYCQSMNILTSVLLLYTKEE 607
>sp|Q9UPU7|TBD2B_HUMAN TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2
Length = 963
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILA-PLY 166
+QI+ D+ RT P+ +S +S + L+N+L+ F+ NP I Y QG+N ++A L
Sbjct: 708 KQIELDLLRTLPNNKHYSCPTSEGI---QKLRNVLLAFSWRNPDIGYCQGLNRLVAVALL 764
Query: 167 YVFKSD 172
Y+ + D
Sbjct: 765 YLEQED 770
>sp|A3KGB4|TBC8B_MOUSE TBC1 domain family member 8B OS=Mus musculus GN=Tbc1d8b PE=2 SV=1
Length = 1114
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
E+I+RD++R+ P+ F D+ + AL+ +L +A NP I Y Q MN + + L
Sbjct: 529 EEIERDLRRSLPEHPAFQSDTGIS-----ALRRVLTAYAYRNPKIGYCQAMNILTSVLLL 583
Query: 168 VFKSD 172
K +
Sbjct: 584 YAKEE 588
>sp|Q0IIM8|TBC8B_HUMAN TBC1 domain family member 8B OS=Homo sapiens GN=TBC1D8B PE=1 SV=2
Length = 1120
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
E+I+RD++R+ P+ F D+ + AL+ +L +A NP I Y Q MN + + L
Sbjct: 530 EEIERDLRRSLPEHPAFQSDTGIS-----ALRRVLTAYAYRNPKIGYCQAMNILTSVLLL 584
Query: 168 VFKSD 172
K +
Sbjct: 585 YAKEE 589
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 110 IDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
I+RDV RT F+ G + S L +IL+ + + + YVQGM+++L+P+ +V
Sbjct: 375 IERDVSRTDRTNKFYEGPENPGLS---LLHDILLTYCMYHFDLGYVQGMSDLLSPILFVV 431
Query: 170 KSDPDE--EFSGF 180
+++ D F GF
Sbjct: 432 QNEVDAFWCFCGF 444
>sp|Q9Z1A9|TBCD8_MOUSE TBC1 domain family member 8 OS=Mus musculus GN=Tbc1d8 PE=2 SV=2
Length = 1134
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 106 IMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPL 165
+ E+I+RD+ R+ P+ F ++ A AL+ +L +A NP I Y Q MN + + L
Sbjct: 545 VTEEIERDLHRSLPEHPAFQNETGIA-----ALRRVLTAYAHRNPKIGYCQSMNILTSVL 599
Query: 166 YYVFKSD 172
K +
Sbjct: 600 LLYAKEE 606
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2
Length = 691
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 110 IDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
I++DV RT F+ G + L +IL+ + + + YVQGM+++L+PL YV
Sbjct: 411 IEKDVNRTDRTNKFYEGQDNPGLI---LLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVM 467
Query: 170 KSDPD 174
+++ D
Sbjct: 468 ENEVD 472
>sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1
Length = 671
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 110 IDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
I++DV RT F+ G + L +IL+ + + + YVQGM+++L+PL YV
Sbjct: 394 IEKDVNRTDRTNKFYEGQDNPGLI---LLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVM 450
Query: 170 KSDPD 174
+++ D
Sbjct: 451 ENEVD 455
>sp|B1AVH7|TBD2A_MOUSE TBC1 domain family member 2A OS=Mus musculus GN=Tbc1d2 PE=2 SV=1
Length = 922
Score = 39.7 bits (91), Expect = 0.017, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 109 QIDRDVKRTHP-DMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
QI+ D+ RT P + HF SSF + L+ +L+ F+ NP I Y QG+N + A
Sbjct: 663 QIELDLNRTFPTNKHFTCPTSSFP----DKLRRVLLAFSWQNPTIGYCQGLNRLAAIALL 718
Query: 168 VFKSDPDEE 176
V + DEE
Sbjct: 719 VLE---DEE 724
>sp|B5DFA1|TBD2A_RAT TBC1 domain family member 2A OS=Rattus norvegicus GN=Tbc1d2 PE=2
SV=1
Length = 924
Score = 39.7 bits (91), Expect = 0.019, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 109 QIDRDVKRTHP-DMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
QI+ D+ RT P + HF SSF + L+ +L+ F+ NP I Y QG+N + A
Sbjct: 665 QIELDLNRTFPTNKHFTCPTSSFP----DKLRRVLLAFSWQNPTIGYCQGLNRLAAIALL 720
Query: 168 VFKSDPDEE 176
V + DEE
Sbjct: 721 VLE---DEE 726
>sp|Q28CB1|TBD2B_XENTR TBC1 domain family member 2B OS=Xenopus tropicalis GN=tbc1d2b PE=2
SV=1
Length = 943
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 10/110 (9%)
Query: 93 KSSIWNQFFQDSEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGI 152
+S + N + + +QI+ D+ RT P+ ++ +S + L+N+L+ ++ NP I
Sbjct: 673 QSLLQNALEKQNPASKQIELDLMRTLPNNKHYTSPTSEGI---QKLRNVLLAYSWRNPDI 729
Query: 153 RYVQGMNEILA-PLYYVFKSDPDEEFSGFSFAFGARSFGGLRTYYTVSTL 201
Y QG+N + A L Y+ D+E + + +F R YYT + L
Sbjct: 730 GYCQGINRLAAIALLYL-----DQEDAFWCLVTIVEAFMP-RDYYTKTLL 773
>sp|Q6GLZ0|GRTP1_XENLA Growth hormone-regulated TBC protein 1 OS=Xenopus laevis GN=grtp1
PE=2 SV=1
Length = 342
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 102 QDSEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEI 161
++ ++++ ++ D+ RT PD F +S+ S Q+ L N+L+ + + N + Y QGMN I
Sbjct: 108 KNPKLLDLVNTDLNRTFPDNVQFRKNSN--PSLQKHLYNVLVAYGQHNTTVGYCQGMNFI 165
Query: 162 LAPLYYVFKSDPDEE 176
L V K DEE
Sbjct: 166 AGYLILVTK---DEE 177
>sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1
SV=2
Length = 1148
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 107 MEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLY 166
+ +I++DV+R + +F+ +N E L+NI+ + + I YVQGM ++LAPL
Sbjct: 936 LHRIEKDVQRCDRNYWYFT------PANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLL 989
Query: 167 YVFKSDPDEEFSGFS 181
+ D+E FS
Sbjct: 990 VIL----DDEALAFS 1000
>sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2
SV=2
Length = 1093
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 107 MEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLY 166
+ +I++DV+R +F+ +N E L+NI+ + + I YVQGM ++LAPL
Sbjct: 881 LHRIEKDVQRCDRSYWYFTA------ANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLL 934
Query: 167 YVFKSDPDEEFSGFS 181
+ D+E FS
Sbjct: 935 VIL----DDEALAFS 945
>sp|D2H0G5|TBD2A_AILME TBC1 domain family member 2A OS=Ailuropoda melanoleuca GN=TBC1D2
PE=3 SV=1
Length = 923
Score = 38.9 bits (89), Expect = 0.032, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 109 QIDRDVKRTHPD-MHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
QI+ D+ RT P+ HF S+F + L+ +L+ F+ NP I Y QG+N + A
Sbjct: 675 QIELDLNRTFPNNKHFTCPTSTFP----DKLRRVLLAFSWQNPTIGYCQGLNRLAAIALL 730
Query: 168 VFKSDPDEEFSGF 180
V +EE S F
Sbjct: 731 VL----EEEESAF 739
>sp|B0R0W9|TBC8B_DANRE TBC1 domain family member 8B OS=Danio rerio GN=tbc1d8b PE=4 SV=1
Length = 1108
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
++I+RD+ R+ P+ F D+ + AL+ +L +A NP I Y Q MN + + L
Sbjct: 512 DEIERDLHRSLPEHPAFQSDTGIS-----ALRRVLTAYAHRNPKIGYCQAMNILTSVLLL 566
Query: 168 VFKSD 172
K +
Sbjct: 567 YAKEE 571
>sp|Q3U0J8|TBD2B_MOUSE TBC1 domain family member 2B OS=Mus musculus GN=Tbc1d2b PE=1 SV=2
Length = 965
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILA-PLY 166
+QI+ D+ RT P+ +S +S + L+++L+ F+ NP I Y QG+N ++A L
Sbjct: 710 KQIELDLLRTLPNNKHYSSPTSEGI---QKLRSVLLAFSWRNPDIGYCQGLNRLVAVALL 766
Query: 167 YVFKSD 172
Y+ + D
Sbjct: 767 YLDQED 772
>sp|P48365|GYP7_YEAST GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP7 PE=1 SV=1
Length = 746
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 138 LKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSD 172
L+NILI + N + YVQGM ++L+P+Y + K +
Sbjct: 513 LQNILITYNVYNTNLGYVQGMTDLLSPIYVIMKEE 547
>sp|Q6GL87|GRTP1_XENTR Growth hormone-regulated TBC protein 1 OS=Xenopus tropicalis
GN=grtp1 PE=2 SV=1
Length = 342
Score = 38.5 bits (88), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 102 QDSEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEI 161
++ ++++ + D+ RT PD F +++ S Q+ L N+L+ + + N + Y QGMN I
Sbjct: 108 KNPKLLDLVITDLNRTFPDNVLFQKNAN--PSLQKDLYNVLVAYGQHNKTVGYCQGMNFI 165
Query: 162 LAPLYYVFKSDPDEE 176
L V K DEE
Sbjct: 166 AGYLILVTK---DEE 177
>sp|Q3UYK3|TBCD9_MOUSE TBC1 domain family member 9 OS=Mus musculus GN=Tbc1d9 PE=2 SV=2
Length = 1264
Score = 38.1 bits (87), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
E+I+RD+ R+ P+ F + A AL+ +L +A NP I Y Q MN + + L
Sbjct: 558 EEIERDLHRSLPEHPAFQNEMGIA-----ALRRVLTAYAFRNPNIGYCQAMNIVTSVLLL 612
Query: 168 VFKSD 172
K +
Sbjct: 613 YAKEE 617
>sp|Q6ZT07|TBCD9_HUMAN TBC1 domain family member 9 OS=Homo sapiens GN=TBC1D9 PE=2 SV=2
Length = 1266
Score = 38.1 bits (87), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYY 167
E+I+RD+ R+ P+ F + A AL+ +L +A NP I Y Q MN + + L
Sbjct: 558 EEIERDLHRSLPEHPAFQNEMGIA-----ALRRVLTAYAFRNPNIGYCQAMNIVTSVLLL 612
Query: 168 VFKSD 172
K +
Sbjct: 613 YAKEE 617
>sp|Q66K14|TBC9B_HUMAN TBC1 domain family member 9B OS=Homo sapiens GN=TBC1D9B PE=1 SV=3
Length = 1250
Score = 37.4 bits (85), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 108 EQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPL 165
E+I+RD+ R+ P+ F + A AL+ +L +A NP I Y Q MN + + L
Sbjct: 551 EEIERDLHRSMPEHPAFQNELGIA-----ALRRVLTAYAFRNPTIGYCQAMNIVTSVL 603
>sp|Q5SVR0|TBC9B_MOUSE TBC1 domain family member 9B OS=Mus musculus GN=Tbc1d9b PE=2 SV=1
Length = 1263
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 90 SLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLN 149
SLGK S+ E+I+RD+ R+ P+ F + A AL+ +L +A N
Sbjct: 543 SLGKYSL---------ATEEIERDLHRSMPEHPAFQNELGIA-----ALRRVLTAYAFRN 588
Query: 150 PGIRYVQGMNEILAPL 165
P I Y Q MN + + L
Sbjct: 589 PTIGYCQAMNIVTSVL 604
>sp|Q5TC63|GRTP1_HUMAN Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1
PE=1 SV=4
Length = 336
Score = 37.4 bits (85), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 77 LSRSEITHDEHPLSLGKSSIWNQFFQ---DSEIMEQIDRDVKRTHPDMHFFSGDSSFATS 133
LS ++ D++P ++Q Q + + + I D+ RT PD F +
Sbjct: 81 LSGAQAQMDQNP------GYYHQLLQGERNPRLEDAIRTDLNRTFPDNVKFRKTTD--PC 132
Query: 134 NQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVFKSDPDEE 176
Q L N+L+ + N G+ Y QGMN I Y + ++ +EE
Sbjct: 133 LQRTLYNVLLAYGHHNQGVGYCQGMNFIAG--YLILITNNEEE 173
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 107 MEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLY 166
+ +ID+DV+R + +F+ N E L++++ + + + YVQGM ++LAPL
Sbjct: 794 LHRIDKDVQRCDRNYWYFT------PPNLERLRDVMCSYVWEHLDVGYVQGMCDLLAPLL 847
Query: 167 YVFKSD 172
+D
Sbjct: 848 VTLDND 853
>sp|P53258|GYP2_YEAST GTPase-activating protein GYP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDR1 PE=1 SV=1
Length = 950
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 104 SEIMEQIDRDVKRTHPDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILA 163
S+ +++I++D+KR+ P+ + + + L+N+L ++ NP + Y Q MN ++A
Sbjct: 283 SQAIDEIEKDLKRSLPEYSAYQTEEGI-----QRLRNVLTAYSWKNPDVGYCQAMNIVVA 337
Query: 164 PLYYVFKSD 172
+ +F S+
Sbjct: 338 G-FLIFMSE 345
>sp|Q95KI1|TB22A_MACFA TBC1 domain family member 22A (Fragment) OS=Macaca fascicularis
GN=TBC1D22A PE=2 SV=2
Length = 497
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 63/171 (36%), Gaps = 63/171 (36%)
Query: 3 GIPDGAGIRSTVWKLLLVYLPPDRGLWPSELAKKRSQY----KHFKDDLLVNPSEITRRL 58
GIP +R WKLL YLP + P+ L +K+ +Y +H+ D
Sbjct: 202 GIP--KPVRPMTWKLLSGYLPANVDRRPATLQRKQKEYFAFIEHYYD------------- 246
Query: 59 DKSTIYESEEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTH 118
SR++ H QD+ QI D+ R
Sbjct: 247 -------------------SRNDEVH-----------------QDT--YRQIHIDIPRMS 268
Query: 119 PDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
P+ + E + IL ++A +P YVQG+N+++ P + VF
Sbjct: 269 PEALILQPKVT------EIFERILFIWAIRHPASGYVQGINDLVTPFFVVF 313
>sp|Q6BU76|GYP7_DEBHA GTPase-activating protein GYP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GYP7 PE=3 SV=2
Length = 757
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 114 VKRTHPDMHFFSGDSSFATSNQE-----ALKNILIVFAKLNPGIRYVQGMNEILAPLYYV 168
+ + P+ + D F SN ++ IL+ + + N + YVQGM ++L+PLY
Sbjct: 491 TRESSPETPDEADDDEFDVSNITNPHLFKMREILLTYNEHNVNLGYVQGMTDLLSPLYVT 550
Query: 169 FKSDPDEEFSGFSFA 183
F+ DE + ++F
Sbjct: 551 FQ---DESLTFWAFV 562
>sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2
Length = 517
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 63/171 (36%), Gaps = 63/171 (36%)
Query: 3 GIPDGAGIRSTVWKLLLVYLPPDRGLWPSELAKKRSQY----KHFKDDLLVNPSEITRRL 58
GIP +R WKLL YLP + P+ L +K+ +Y +H+ D
Sbjct: 222 GIP--KPVRPMTWKLLSGYLPANVDRRPATLQRKQKEYFAFIEHYYD------------- 266
Query: 59 DKSTIYESEEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTH 118
SR++ H QD+ QI D+ R
Sbjct: 267 -------------------SRNDEVH-----------------QDT--YRQIHIDIPRMS 288
Query: 119 PDMHFFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
P+ + E + IL ++A +P YVQG+N+++ P + VF
Sbjct: 289 PEALILQPKVT------EIFERILFIWAIRHPASGYVQGINDLVTPFFVVF 333
>sp|Q8R5A6|TB22A_MOUSE TBC1 domain family member 22A OS=Mus musculus GN=Tbc1d22a PE=2 SV=3
Length = 516
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 55/167 (32%)
Query: 3 GIPDGAGIRSTVWKLLLVYLPPDRGLWPSELAKKRSQYKHFKDDLLVNPSEITRRLDKST 62
GIP +R WKLL YLP + P+ L +K+ +Y F +
Sbjct: 221 GIP--KPVRPMTWKLLSGYLPANVDRRPATLQRKQKEYFAFIEHY--------------- 263
Query: 63 IYESEEWKCESSGFLSRSEITHDEHPLSLGKSSIWNQFFQDSEIMEQIDRDVKRTHPDMH 122
+ SR++ H QD+ QI D+ R P+
Sbjct: 264 -------------YSSRNDEVH-----------------QDT--YRQIHIDIPRMSPEAL 291
Query: 123 FFSGDSSFATSNQEALKNILIVFAKLNPGIRYVQGMNEILAPLYYVF 169
+ E + IL ++A +P YVQG+N+++ P + VF
Sbjct: 292 ILQPKVT------EIFERILFIWAIRHPASGYVQGINDLVTPFFVVF 332
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,368,498
Number of Sequences: 539616
Number of extensions: 3565338
Number of successful extensions: 7736
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 7668
Number of HSP's gapped (non-prelim): 99
length of query: 234
length of database: 191,569,459
effective HSP length: 114
effective length of query: 120
effective length of database: 130,053,235
effective search space: 15606388200
effective search space used: 15606388200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)