Query 026706
Match_columns 234
No_of_seqs 216 out of 1491
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 11:35:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026706.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026706hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0700 Protein phosphatase 2C 100.0 1.1E-47 2.4E-52 340.6 18.1 230 2-233 17-282 (390)
2 KOG0698 Serine/threonine prote 100.0 3.1E-33 6.8E-38 250.0 21.3 178 40-233 32-215 (330)
3 KOG0697 Protein phosphatase 1B 100.0 2.7E-32 5.8E-37 231.7 14.4 164 49-233 23-194 (379)
4 PF00481 PP2C: Protein phospha 100.0 4.3E-32 9.3E-37 234.0 13.0 165 50-233 2-170 (254)
5 PLN03145 Protein phosphatase 2 100.0 1.8E-30 3.9E-35 234.4 18.7 163 51-233 69-235 (365)
6 PTZ00224 protein phosphatase 2 100.0 2.6E-28 5.6E-33 221.3 18.0 149 50-233 25-174 (381)
7 KOG0699 Serine/threonine prote 99.9 1E-25 2.3E-30 197.5 13.9 71 150-233 330-400 (542)
8 COG0631 PTC1 Serine/threonine 99.9 7.6E-25 1.7E-29 190.1 14.4 145 50-209 11-161 (262)
9 smart00332 PP2Cc Serine/threon 99.9 7.1E-22 1.5E-26 168.7 19.9 145 51-211 9-157 (255)
10 cd00143 PP2Cc Serine/threonine 99.9 2.3E-21 5E-26 164.9 18.1 146 51-211 4-154 (254)
11 PRK14559 putative protein seri 99.9 4.4E-21 9.6E-26 183.4 15.3 145 50-202 378-531 (645)
12 KOG1323 Serine/threonine phosp 99.7 2.9E-17 6.3E-22 143.3 14.1 121 76-210 139-298 (493)
13 PF13672 PP2C_2: Protein phosp 99.5 2E-13 4.4E-18 113.9 12.2 131 52-196 3-138 (212)
14 KOG1379 Serine/threonine prote 99.1 1.1E-09 2.3E-14 95.8 12.2 100 60-180 90-199 (330)
15 smart00331 PP2C_SIG Sigma fact 99.0 4.9E-09 1.1E-13 86.2 12.5 102 57-179 13-116 (193)
16 KOG0618 Serine/threonine phosp 98.7 4.6E-08 1E-12 95.8 8.8 130 80-233 550-688 (1081)
17 TIGR02865 spore_II_E stage II 97.4 0.0034 7.4E-08 62.5 13.5 114 56-197 562-678 (764)
18 PF07228 SpoIIE: Stage II spor 97.2 0.012 2.6E-07 47.8 12.6 88 80-180 3-92 (193)
19 COG2873 MET17 O-acetylhomoseri 32.1 37 0.00081 31.3 2.5 47 150-210 337-397 (426)
20 TIGR02276 beta_rpt_yvtn 40-res 27.4 93 0.002 17.9 3.0 19 161-179 3-21 (42)
21 PF05785 CNF1: Rho-activating 25.9 78 0.0017 27.9 3.3 24 148-172 130-153 (281)
22 PF01436 NHL: NHL repeat; Int 21.2 1.6E+02 0.0034 16.0 3.4 19 158-176 9-27 (28)
No 1
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=340.58 Aligned_cols=230 Identities=49% Similarity=0.798 Sum_probs=201.9
Q ss_pred chHHHHHhhhccCCCCCCCCCCCC-CCCCC-CCCCccCcccCCCCCcccceeeeeecCCCCCCcceeeccCCCCCCCC-C
Q 026706 2 VSATFMKIVSPCWKPSTEGENSNS-DGEDN-GRVDGLLWYKDSGHHVSGEFSMAVVQANNQLEDCSQLESGPLSSLES-G 78 (234)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~w~~~l~~~~~g~~s~a~~~~r~~~ED~~~v~~~~l~~~~~-~ 78 (234)
|++..+++.+.|++|..+...... +.+.. .+.++++|+++...+..|++++++.+.+..++|...+..+.+..... .
T Consensus 17 ~~~~~~~~~~s~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~ 96 (390)
T KOG0700|consen 17 MKSTPMRLKRSCLRPIRRGESSSRSGSDSSGNSVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEE 96 (390)
T ss_pred hccccchhhhhccCCCccccccccccccCCCCCcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeecc
Confidence 567788999999999998765543 22222 36799999999999999999999999998888888887776655444 6
Q ss_pred CCceEEEEecCCCChHHHHHHHHHHHHHHHhhh------------cc--------------------c-cccHHHHHHHH
Q 026706 79 PQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFT------------SE--------------------S-CGISADVITRA 125 (234)
Q Consensus 79 ~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~------------~~--------------------~-~~~~~~~l~~a 125 (234)
.+..|+||||||||++|++|++++|+.++...+ .+ . ...+.++|.+|
T Consensus 97 ~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~A 176 (390)
T KOG0700|consen 97 NGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKA 176 (390)
T ss_pred CCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHH
Confidence 788999999999999999999999999998322 22 1 35678999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHH
Q 026706 126 FLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREE 205 (234)
Q Consensus 126 f~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~R 205 (234)
|.++|++|++.+.+++...|+.+.+||||+|++|++..|||||+|||||||+...+..+.+.++|||+||++++++|++|
T Consensus 177 f~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~R 256 (390)
T KOG0700|consen 177 FEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRR 256 (390)
T ss_pred HHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999985555589999999999999999999
Q ss_pred HHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706 206 LRALHPDDPQIVVLKHKVWRVKGIIQVT 233 (234)
Q Consensus 206 I~~~gg~~~~ivv~~~g~~RV~G~l~vS 233 (234)
|++.||+|++++++++ |||+|+|+||
T Consensus 257 ir~eHPdd~~~vv~~~--~RvkG~L~vs 282 (390)
T KOG0700|consen 257 IRSEHPDDPHIVVNKH--WRVKGILQVS 282 (390)
T ss_pred HHHhCCCCcceEeecc--ceeeEEEEee
Confidence 9999999999999998 7999999997
No 2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=249.95 Aligned_cols=178 Identities=35% Similarity=0.464 Sum_probs=144.1
Q ss_pred cCCCCCcccceeeeeecC-CCCCCcceeeccCCCCCCCCCC-CceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccc-
Q 026706 40 KDSGHHVSGEFSMAVVQA-NNQLEDCSQLESGPLSSLESGP-QGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCG- 116 (234)
Q Consensus 40 ~~l~~~~~g~~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~-~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~- 116 (234)
+......+-..+.+.+++ |..|||++.............. ...||||||||||+.+|+|+.++|+..+.+.......
T Consensus 32 ~~~~~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~ 111 (330)
T KOG0698|consen 32 KLSINESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDR 111 (330)
T ss_pred cccccccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccch
Confidence 333444455566667777 5679999988765422222233 6899999999999999999999999999987665554
Q ss_pred -cHHHHHHHHHH-HHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECC-eEEEEEcCCCcEEEEeecCCCCceEEEeCCC
Q 026706 117 -ISADVITRAFL-ETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSG-LLYIANAGDSRVVLGRMENDVKEVKAVQLSS 193 (234)
Q Consensus 117 -~~~~~l~~af~-~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~-~l~vANvGDSRavl~~~~~~~~~~~~~~LT~ 193 (234)
..+++++++|. .+|..|++. ..+...+||||+++++.++ +|||||+|||||||++++ .++++||.
T Consensus 112 ~~~~~a~~~~F~~~~D~~~~~~-------~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~-----~~a~~Ls~ 179 (330)
T KOG0698|consen 112 QDVKDALRRAFLTKTDSEFLEK-------REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG-----GVAVQLSV 179 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-------ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC-----CeeeeCCC
Confidence 48899999999 699999865 1113468999999999866 999999999999999874 28999999
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706 194 EHNASMEFVREELRALHPDDPQIVVLKHKVWRVKGIIQVT 233 (234)
Q Consensus 194 dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l~vS 233 (234)
||+|+.+.|++||+++| +.|....|+|||+|.|+||
T Consensus 180 DHkP~~~~E~~RI~~~G----G~v~~~~~~~Rv~G~Lavs 215 (330)
T KOG0698|consen 180 DHKPDREDERERIEAAG----GRVSNWGGVWRVNGVLAVS 215 (330)
T ss_pred CCCCCcHHHHHHHHHcC----CEEEEcCCcceEeceEEEe
Confidence 99999999999999999 5666677789999999997
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-32 Score=231.66 Aligned_cols=164 Identities=23% Similarity=0.363 Sum_probs=139.0
Q ss_pred ceeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhcccc-------ccHHH
Q 026706 49 EFSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESC-------GISAD 120 (234)
Q Consensus 49 ~~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~-------~~~~~ 120 (234)
.|+++++|+ |-.|||++...... .++-++.+||||||||.|+++|+++++||..+|...-.... .+.+.
T Consensus 23 ryg~SSMQGWR~eMEDah~A~~~l---~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~ 99 (379)
T KOG0697|consen 23 RYGVSSMQGWRVEMEDAHTAVAGL---PSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEK 99 (379)
T ss_pred eeeeccccchhhhhhhhhhhhhcC---CCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHh
Confidence 389999999 56799999776432 24456789999999999999999999999999987322211 25677
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCH
Q 026706 121 VITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME 200 (234)
Q Consensus 121 ~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~ 200 (234)
-|++.|+++|+.+...... ......+||||+.+++...++|++|+|||||||+|++ +++.-|.||+|.+|
T Consensus 100 GIrtGFL~iDE~mr~~~~~----~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng------~~~f~TqDHKP~~p 169 (379)
T KOG0697|consen 100 GIRTGFLSIDEIMRTLSDI----SKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG------EVVFSTQDHKPYLP 169 (379)
T ss_pred hHhhcceeHHHHHhhhhhh----hcccccCCceEEEEEecCceEEEEecCcchhheecCC------ceEEeccCCCCCCh
Confidence 8999999999988765543 2223459999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706 201 FVREELRALHPDDPQIVVLKHKVWRVKGIIQVT 233 (234)
Q Consensus 201 ~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l~vS 233 (234)
.|++||+.+| +.|+.+ ||||.|+||
T Consensus 170 ~EkeRIqnAG----GSVMIq----RvNGsLAVS 194 (379)
T KOG0697|consen 170 KEKERIQNAG----GSVMIQ----RVNGSLAVS 194 (379)
T ss_pred HHHHHHhcCC----CeEEEE----Eecceeeee
Confidence 9999999999 678889 999999998
No 4
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.98 E-value=4.3e-32 Score=233.95 Aligned_cols=165 Identities=31% Similarity=0.444 Sum_probs=130.7
Q ss_pred eeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccc-cHHHHHHHHHH
Q 026706 50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCG-ISADVITRAFL 127 (234)
Q Consensus 50 ~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~-~~~~~l~~af~ 127 (234)
++....++ |.+|||.+.+..+. .......+..+|||||||||+.+|+|++++|+..+.+....... ...++|.++|.
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~-~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~ 80 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNF-NSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEE-TCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCc-cccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceee
Confidence 45566666 78899999987532 11134567899999999999999999999999988886655544 68899999999
Q ss_pred H-HHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEE-eCCCCCCCCCHHHHHH
Q 026706 128 E-TEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAV-QLSSEHNASMEFVREE 205 (234)
Q Consensus 128 ~-~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~-~LT~dH~~~~~~Er~R 205 (234)
. +++.+...... . ....+||||++++|.+++|||||||||||||++.+ ... +||.||+|+++.|++|
T Consensus 81 ~~~~~~~~~~~~~----~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~------~~~~~Lt~dH~~~~~~E~~R 149 (254)
T PF00481_consen 81 AFTDESLYSDSEN----N-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG------GIIKQLTRDHKPSNPDERER 149 (254)
T ss_dssp HHHHHHHHHHHHH----H-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT------EEEEESS---STTSHHHHHH
T ss_pred ecccccccccccc----c-ccccccccccccccccceeEEEeeeeeeeeeeecc------ccccccccccccchhhccce
Confidence 9 88888763321 1 23468999999999999999999999999999998 666 9999999999999999
Q ss_pred HHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706 206 LRALHPDDPQIVVLKHKVWRVKGIIQVT 233 (234)
Q Consensus 206 I~~~gg~~~~ivv~~~g~~RV~G~l~vS 233 (234)
|+++|| .+.. .+||+|.|+||
T Consensus 150 I~~~gg----~v~~---~~rv~g~l~~s 170 (254)
T PF00481_consen 150 IRKAGG----RVSE---NGRVNGVLAVS 170 (254)
T ss_dssp HHHTT-----GEEE---TEEETTTBSSS
T ss_pred eecccc----cccc---chhhhhccccc
Confidence 999996 2332 45999999887
No 5
>PLN03145 Protein phosphatase 2c; Provisional
Probab=99.97 E-value=1.8e-30 Score=234.35 Aligned_cols=163 Identities=27% Similarity=0.363 Sum_probs=126.1
Q ss_pred eeeeecCCCCCCcceeeccCCCC---CC-CCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHH
Q 026706 51 SMAVVQANNQLEDCSQLESGPLS---SL-ESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAF 126 (234)
Q Consensus 51 s~a~~~~r~~~ED~~~v~~~~l~---~~-~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af 126 (234)
+.+..+.|+.|||++++..+... .. .......||||||||||+.+++|++++|++.|.+... ....+.++|+++|
T Consensus 69 ~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~-~~~~~~~al~~af 147 (365)
T PLN03145 69 AWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED-FPREIEKVVSSAF 147 (365)
T ss_pred EEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc-cchhHHHHHHHHH
Confidence 33444558999999887543110 00 1122458999999999999999999999999987432 2335678899999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHH
Q 026706 127 LETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREEL 206 (234)
Q Consensus 127 ~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI 206 (234)
..+++.|.+.... . ....+|||+++++|.++++|||||||||||+++.+ ++++||+||+|.++.|++||
T Consensus 148 ~~~d~~~~~~~~~----~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g------~~~~LT~DH~~~~~~E~~RI 216 (365)
T PLN03145 148 LQTDTAFAEACSL----D-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG------KAIEMSRDHKPMCSKERKRI 216 (365)
T ss_pred HHHhHHHHhhhcc----c-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC------eEEEecCCCCCCCHHHHHHH
Confidence 9999998764321 1 12348999999999999999999999999999998 89999999999999999999
Q ss_pred HHcCCCCCCeEEecCCeeeeceEEeec
Q 026706 207 RALHPDDPQIVVLKHKVWRVKGIIQVT 233 (234)
Q Consensus 207 ~~~gg~~~~ivv~~~g~~RV~G~l~vS 233 (234)
++.|+ .+. .| |++|.+.||
T Consensus 217 ~~~Gg----~v~--~g--~v~g~l~vT 235 (365)
T PLN03145 217 EASGG----YVY--DG--YLNGQLNVA 235 (365)
T ss_pred HHcCC----cee--cc--eECCccccc
Confidence 99985 332 23 777766654
No 6
>PTZ00224 protein phosphatase 2C; Provisional
Probab=99.96 E-value=2.6e-28 Score=221.25 Aligned_cols=149 Identities=26% Similarity=0.317 Sum_probs=118.7
Q ss_pred eeeeeecCCCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHH
Q 026706 50 FSMAVVQANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLET 129 (234)
Q Consensus 50 ~s~a~~~~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~ 129 (234)
.+.+..+.|+.|||++.+.... +..||||||||||.++|+|++++|+..+.+.. .....+.|+++|..+
T Consensus 25 g~~s~~G~R~~nED~~~v~~~~--------~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~---~~~~~~~l~~a~~~~ 93 (381)
T PTZ00224 25 ASACVNGYRESMEDAHLLYLTD--------DWGFFGVFDGHVNDECSQYLARAWPQALEKEP---EPMTDERMEELCLEI 93 (381)
T ss_pred EEEeCCCCCCCCCCeeEeccCC--------CceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc---ccccHHHHHHHHHHH
Confidence 3444445588899998875332 45799999999999999999999998876522 122356689999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCceEEEEEEE-CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHHH
Q 026706 130 EEEFLSLVRNQWLNKPQIASAGSCCLVGIIC-SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRA 208 (234)
Q Consensus 130 d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~-~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~ 208 (234)
|+.|++.. ..+|||+++++|. ++++|||||||||||+++.+ ++++||+||+|.++.|++||.+
T Consensus 94 d~~i~~~~----------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g------~~~~LT~DH~~~~~~E~~RI~~ 157 (381)
T PTZ00224 94 DEEWMDSG----------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG------KLVFATEDHKPNNPGERQRIEA 157 (381)
T ss_pred HHHHHhcc----------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECC------EEEEcccCCCCCCHHHHhHHHH
Confidence 99987431 1369999998886 57999999999999999988 9999999999999999999999
Q ss_pred cCCCCCCeEEecCCeeeeceEEeec
Q 026706 209 LHPDDPQIVVLKHKVWRVKGIIQVT 233 (234)
Q Consensus 209 ~gg~~~~ivv~~~g~~RV~G~l~vS 233 (234)
.++ .+.. + ||+|.+.||
T Consensus 158 ~gg----~v~~--~--Rv~G~l~vT 174 (381)
T PTZ00224 158 CGG----RVVS--N--RVDGDLAVS 174 (381)
T ss_pred ccC----Eecc--c--cccCceeee
Confidence 985 3322 2 888887776
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=1e-25 Score=197.49 Aligned_cols=71 Identities=34% Similarity=0.463 Sum_probs=65.9
Q ss_pred CCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEecCCeeeeceE
Q 026706 150 AGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWRVKGI 229 (234)
Q Consensus 150 ~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~ 229 (234)
+||||+|+||.+++|||||.|||||||+|.+ +++-||.||+|.++.|..||.++|| -|.-+| ||+|-
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~G------kAvdmS~DHKPEDevE~~RI~~AGG-----~vtlDG--RVNGG 396 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNG------KAVDMSVDHKPEDEVETNRIHAAGG-----QVTLDG--RVNGG 396 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCC------ceeecccCCCcccHHHHHHHHhcCC-----eEeecc--eecCc
Confidence 9999999999999999999999999999999 9999999999999999999999997 334456 99999
Q ss_pred Eeec
Q 026706 230 IQVT 233 (234)
Q Consensus 230 l~vS 233 (234)
|..|
T Consensus 397 LNLS 400 (542)
T KOG0699|consen 397 LNLS 400 (542)
T ss_pred cchh
Confidence 8766
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.92 E-value=7.6e-25 Score=190.11 Aligned_cols=145 Identities=19% Similarity=0.253 Sum_probs=118.3
Q ss_pred eeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccc---c--HHHHHH
Q 026706 50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCG---I--SADVIT 123 (234)
Q Consensus 50 ~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~---~--~~~~l~ 123 (234)
+..+..+. |..|||++.+.... .... ..||+|||||||+++++++++.+.+.|.+....... . ..+.+.
T Consensus 11 ~~~s~~g~~R~~NeD~~~~~~~~----~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~ 85 (262)
T COG0631 11 AGLSDVGTVRKHNEDAFLIKPNE----NGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLK 85 (262)
T ss_pred eeeccCCCccCCCCcceeecccc----CCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 33444455 67899999987532 2222 579999999999999999999999999986554321 1 578999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHH
Q 026706 124 RAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVR 203 (234)
Q Consensus 124 ~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er 203 (234)
+++..+++.+..... .......+|||++++++.++++|+|||||||+||++++ .++|||.||++.++.|+
T Consensus 86 ~~~~~~n~~i~~~~~----~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~------~~~~lT~DH~~~~~~~~ 155 (262)
T COG0631 86 EAILKANEAIAEEGQ----LNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG------ELKQLTEDHSLVNRLEQ 155 (262)
T ss_pred HHHHHHHHHHHHhhh----cccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC------ceEEeccCCcHHHHHHH
Confidence 999999999987644 23445679999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHc
Q 026706 204 EELRAL 209 (234)
Q Consensus 204 ~RI~~~ 209 (234)
+|+...
T Consensus 156 ~~~~~~ 161 (262)
T COG0631 156 RGIITP 161 (262)
T ss_pred hcCCCH
Confidence 885443
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.89 E-value=7.1e-22 Score=168.68 Aligned_cols=145 Identities=34% Similarity=0.522 Sum_probs=120.4
Q ss_pred eeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccc---cHHHHHHHHH
Q 026706 51 SMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCG---ISADVITRAF 126 (234)
Q Consensus 51 s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~---~~~~~l~~af 126 (234)
+.+..++ |.+|||++.+.... ..+..+|+|+|||||+.+|+++++.+.+.+.+....... .+.+.|++++
T Consensus 9 ~~~~~~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (255)
T smart00332 9 GLSSMQGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAF 82 (255)
T ss_pred EEecCCCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHH
Confidence 3445555 67899999886431 136789999999999999999999999998875443322 4778899999
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHH
Q 026706 127 LETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREEL 206 (234)
Q Consensus 127 ~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI 206 (234)
..+++.+........ ....+|||++++++.++++|++|+||||+|+++.+ +.++||.||++.++.|..||
T Consensus 83 ~~~~~~~~~~~~~~~----~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~------~~~~lt~dh~~~~~~~~~~i 152 (255)
T smart00332 83 LKTDEEILEELESLE----EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG------KAVQLTEDHKPSNEDERARI 152 (255)
T ss_pred HHHHHHHHHhhhhcc----CCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC------ceeEcCCCCCCcCHHHHHHH
Confidence 999999987655422 33568999999999999999999999999999987 78999999999999999999
Q ss_pred HHcCC
Q 026706 207 RALHP 211 (234)
Q Consensus 207 ~~~gg 211 (234)
...++
T Consensus 153 ~~~~~ 157 (255)
T smart00332 153 EAAGG 157 (255)
T ss_pred HHcCC
Confidence 99875
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.88 E-value=2.3e-21 Score=164.89 Aligned_cols=146 Identities=29% Similarity=0.466 Sum_probs=120.7
Q ss_pred eeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccc----cccHHHHHHHH
Q 026706 51 SMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSES----CGISADVITRA 125 (234)
Q Consensus 51 s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~----~~~~~~~l~~a 125 (234)
+.+..++ |..|||++.+..... ..+..+|+|+|||||...++++++.+.+.+.+..... ...+...|+++
T Consensus 4 ~~~~~~g~r~~neD~~~~~~~~~-----~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 78 (254)
T cd00143 4 GVSDKGGDRKTNEDAVVIKPNLN-----NEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKA 78 (254)
T ss_pred eeecCCCCCCCCcceEEEeccCC-----CCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 3445555 677999998864320 0256899999999999999999999999998866544 34567889999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHH
Q 026706 126 FLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREE 205 (234)
Q Consensus 126 f~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~R 205 (234)
|..+++.+....... .....+|||++++++.+++++++|+||||+|+++.+ +.+++|.||++.++.|+.|
T Consensus 79 ~~~~~~~l~~~~~~~----~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~------~~~~lt~dh~~~~~~~~~~ 148 (254)
T cd00143 79 FLRADEEILEEAQDE----PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG------EAVQLTKDHKPVNEEERER 148 (254)
T ss_pred HHHHHHHHHHhhhhc----cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC------ceeEcCCCCCCcChHHHHH
Confidence 999999987664431 334568999999999999999999999999999998 8999999999999999999
Q ss_pred HHHcCC
Q 026706 206 LRALHP 211 (234)
Q Consensus 206 I~~~gg 211 (234)
|...++
T Consensus 149 i~~~~~ 154 (254)
T cd00143 149 IEKAGG 154 (254)
T ss_pred HHHcCC
Confidence 999886
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.86 E-value=4.4e-21 Score=183.38 Aligned_cols=145 Identities=14% Similarity=0.162 Sum_probs=98.6
Q ss_pred eeeeeecC-CCCCCcceeeccCCC----CCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccc---cccHHHH
Q 026706 50 FSMAVVQA-NNQLEDCSQLESGPL----SSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSES---CGISADV 121 (234)
Q Consensus 50 ~s~a~~~~-r~~~ED~~~v~~~~l----~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~---~~~~~~~ 121 (234)
++.+.+|. |+.|||++.+..... +.........+|+|||||||+.+++.+++...+.|.++.... ....++.
T Consensus 378 a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~ 457 (645)
T PRK14559 378 AGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEET 457 (645)
T ss_pred EEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHH
Confidence 44555565 788999987643210 000001235689999999988765555544444444322211 1134678
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEe-ecCCCCceEEEeCCCCCCCCCH
Q 026706 122 ITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGR-MENDVKEVKAVQLSSEHNASME 200 (234)
Q Consensus 122 l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~-~~~~~~~~~~~~LT~dH~~~~~ 200 (234)
|+++|..+++.+.+...+.. ......+|||+++++|.++++|++||||||+|+++ ++ +++|||+||++..+
T Consensus 458 L~~ai~~AN~~I~~~~~~~~--~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g------~l~QLT~DHs~~~~ 529 (645)
T PRK14559 458 IREAIYLANEAIYDLNQQNA--RSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG------GLEQLTVDHEVGQR 529 (645)
T ss_pred HHHHHHHHHHHHHHHhhhcc--cccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC------eEEEeCCCCCHHHH
Confidence 99999999999986544321 11334699999999999999999999999999885 45 89999999998755
Q ss_pred HH
Q 026706 201 FV 202 (234)
Q Consensus 201 ~E 202 (234)
..
T Consensus 530 lv 531 (645)
T PRK14559 530 EI 531 (645)
T ss_pred HH
Confidence 43
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.74 E-value=2.9e-17 Score=143.33 Aligned_cols=121 Identities=31% Similarity=0.467 Sum_probs=99.7
Q ss_pred CCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccc---------------------------------------cc
Q 026706 76 ESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSES---------------------------------------CG 116 (234)
Q Consensus 76 ~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~---------------------------------------~~ 116 (234)
....++++|.+||||.|+.+|-.++..|.+++...+.+. +.
T Consensus 139 a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~ 218 (493)
T KOG1323|consen 139 APRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEH 218 (493)
T ss_pred CCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHH
Confidence 345688999999999999999999999999988633310 01
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCC
Q 026706 117 ISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHN 196 (234)
Q Consensus 117 ~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~ 196 (234)
.+.-+|..||+.+|+++-+... .|. ...|||+++++.--++|||||.|||||+|.|++ ..++||.+.+
T Consensus 219 LViGAlEsAFqemDeqiarer~-~~~-----~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd------eirplS~efT 286 (493)
T KOG1323|consen 219 LVIGALESAFQEMDEQIARERQ-VWR-----LPGGCTALVVIVLLGKLYVANAGDSRAILVRND------EIRPLSKEFT 286 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-hhc-----CCCCceEEEeeeeccceEEccCCCceEEEEecC------CeeecccccC
Confidence 2446789999999999876533 232 247999999999999999999999999999999 9999999998
Q ss_pred CCCHHHHHHHHHcC
Q 026706 197 ASMEFVREELRALH 210 (234)
Q Consensus 197 ~~~~~Er~RI~~~g 210 (234)
|. .||+||+.+.
T Consensus 287 Pe--tERqRlQ~La 298 (493)
T KOG1323|consen 287 PE--TERQRLQELA 298 (493)
T ss_pred cH--HHHHHHHHHh
Confidence 85 7999999874
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.51 E-value=2e-13 Score=113.94 Aligned_cols=131 Identities=19% Similarity=0.263 Sum_probs=72.2
Q ss_pred eeeecCCCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHH-HHHHHHHHH
Q 026706 52 MAVVQANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADV-ITRAFLETE 130 (234)
Q Consensus 52 ~a~~~~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~-l~~af~~~d 130 (234)
.+..+.+.+|||++.+.... +..+++|+||+||...++..+..+...+.+.+.......... ..+.+..+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~--------~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~ 74 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDD--------DGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIK 74 (212)
T ss_dssp ----TTSSS--EEEEEE-TC--------CTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCC--------CCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 34456688999999876544 667889999999766666655555555554433333221111 223333333
Q ss_pred HHHHHHH---HhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEE-eecCCCCceEEEeCCCCCC
Q 026706 131 EEFLSLV---RNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLG-RMENDVKEVKAVQLSSEHN 196 (234)
Q Consensus 131 ~~~~~~~---~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~-~~~~~~~~~~~~~LT~dH~ 196 (234)
..+.... .............+||++++++.+++++++|+||||+++. +.+ ...+++.+|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g------~~~~l~~~~~ 138 (212)
T PF13672_consen 75 KEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG------EIQQLTDDHS 138 (212)
T ss_dssp HHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT------EEEE-S---B
T ss_pred HHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC------EEEEcCCCcc
Confidence 3333211 0000001233457999999999999999999999999654 555 8899999997
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.11 E-value=1.1e-09 Score=95.78 Aligned_cols=100 Identities=23% Similarity=0.309 Sum_probs=72.1
Q ss_pred CCCcceeeccCCCCCCCCCCCceEEEEecCCCCh-----HHHHHHHHHHHHHHHhhhc---cccccHHHHHHHHHHHHHH
Q 026706 60 QLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGP-----EAARFVNDHLFDNIKKFTS---ESCGISADVITRAFLETEE 131 (234)
Q Consensus 60 ~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~-----~aa~~~~~~l~~~l~~~~~---~~~~~~~~~l~~af~~~d~ 131 (234)
.=||++++..++ ...+.||+||.||+ ..+.|. ..|.+...+..+ .....+...|.+||.++-+
T Consensus 90 ~GEDa~Fvss~~--------~~~v~GVADGVGGWa~~GiDpg~fS-~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~ 160 (330)
T KOG1379|consen 90 GGEDAWFVSSNP--------HAIVMGVADGVGGWAEYGIDPGAFS-RELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS 160 (330)
T ss_pred CCCcceeeccCc--------ccceEEEccccchHhhcCcCHHHHH-HHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh
Confidence 468999997655 78899999999965 456664 344444444332 2334677888888866432
Q ss_pred HHHHHHHhhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCCCcEEEEeec
Q 026706 132 EFLSLVRNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRME 180 (234)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~~~~ 180 (234)
...+...+|||+++++. +++||+||+|||...+.|++
T Consensus 161 ------------~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G 199 (330)
T KOG1379|consen 161 ------------QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG 199 (330)
T ss_pred ------------cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC
Confidence 22233478888888887 89999999999999999998
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.03 E-value=4.9e-09 Score=86.16 Aligned_cols=102 Identities=19% Similarity=0.126 Sum_probs=73.7
Q ss_pred CCCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHH
Q 026706 57 ANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSL 136 (234)
Q Consensus 57 ~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~ 136 (234)
+...-.|.+.+...+ ++..+|+|+||||+...|.+++..+...+.+..... . .+.+.+..+++.+...
T Consensus 13 ~~~~~GD~~~~~~~~-------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~-~----~~~~~l~~~n~~l~~~ 80 (193)
T smart00331 13 ATQVGGDFYDVVKLP-------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG-I----SLSQILERLNRAIYEN 80 (193)
T ss_pred hHhcCccEEEEEEeC-------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC-C----CHHHHHHHHHHHHHhc
Confidence 345566777665332 246899999999988888888888888887754432 1 2445556666666543
Q ss_pred HHhhccCCCCCCCCCceEEEEEE--ECCeEEEEEcCCCcEEEEee
Q 026706 137 VRNQWLNKPQIASAGSCCLVGII--CSGLLYIANAGDSRVVLGRM 179 (234)
Q Consensus 137 ~~~~~~~~~~~~~~GsTa~v~li--~~~~l~vANvGDSRavl~~~ 179 (234)
.....|+|++++++ .+++++++|+||+|+++.+.
T Consensus 81 ---------~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~ 116 (193)
T smart00331 81 ---------GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRA 116 (193)
T ss_pred ---------CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEEC
Confidence 12347999999998 68899999999999999983
No 16
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.71 E-value=4.6e-08 Score=95.81 Aligned_cols=130 Identities=15% Similarity=0.201 Sum_probs=101.8
Q ss_pred CceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEE
Q 026706 80 QGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGII 159 (234)
Q Consensus 80 ~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li 159 (234)
....||.|||-+-.....+++..+..++.++.+.... ..+.|+.+|...+.++-+.-. .-|..++.+.|
T Consensus 550 ~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~-et~~mr~~fl~~~rklg~~g~----------~lg~~~~~~~i 618 (1081)
T KOG0618|consen 550 PQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGN-ETEQMRNTFLRLNRKLGEEGQ----------VLGGSVVLCQI 618 (1081)
T ss_pred CcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHhhhhhhhhc----------cccchhhheee
Confidence 3578999999999999999999999999997765544 344599999999988844322 23555555555
Q ss_pred EC--------CeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCC-CCCCHHHHHHHHHcCCCCCCeEEecCCeeeeceEE
Q 026706 160 CS--------GLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEH-NASMEFVREELRALHPDDPQIVVLKHKVWRVKGII 230 (234)
Q Consensus 160 ~~--------~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH-~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l 230 (234)
.. .++.+||+|+|.+|+++.+ +..++|+-. ...+++|.+||+..+| ++..+| +|+|+.
T Consensus 619 ~~d~~~~asS~~l~~Anvg~c~avls~ng------~~~p~t~~~~~~v~~eE~~RI~~~~g-----~i~ed~--k~ngvt 685 (1081)
T KOG0618|consen 619 VEDSLSPASSKTLFAANVGTCMAVLSRNG------KPLPTTRSPMLEVDREEYKRIVDSKG-----FITEDN--KLNGVT 685 (1081)
T ss_pred cccccCcccchhhhHhhhccchhhhhhcC------CcCcccccccccCCHHHHHHHHHhcC-----eecCCC--eeecee
Confidence 43 3789999999999999998 777777765 4459999999999986 566677 888887
Q ss_pred eec
Q 026706 231 QVT 233 (234)
Q Consensus 231 ~vS 233 (234)
..|
T Consensus 686 ~~t 688 (1081)
T KOG0618|consen 686 SST 688 (1081)
T ss_pred eee
Confidence 654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=97.37 E-value=0.0034 Score=62.47 Aligned_cols=114 Identities=18% Similarity=0.102 Sum_probs=74.5
Q ss_pred cCCCCCCcceeeccCCCCCCCCCCCceEEEEecCCC-ChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH
Q 026706 56 QANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHG-GPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFL 134 (234)
Q Consensus 56 ~~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHG-G~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~ 134 (234)
.++....|.+.+...+ +....++|.||.| |..|+ ..+......+.+..... ..+ ..++..+|..+.
T Consensus 562 ~g~~vsGD~y~~~~l~-------~g~~~~~laDGmGhG~~Aa-~~S~~~~~ll~~~~~~g-~~~----~~ai~~lN~~L~ 628 (764)
T TIGR02865 562 DGELVSGDSYSFGKLS-------AGKYAVAISDGMGSGPEAA-QESSACVRLLEKFLESG-FDR----EVAIKTVNSILS 628 (764)
T ss_pred CCCcccCceEEEEEEC-------CCEEEEEEEcccCCCHHHH-HHHHHHHHHHHHHHHcC-CCH----HHHHHHHHHHHH
Confidence 3466789998775422 2456789999999 55555 44555555554433211 122 445566666553
Q ss_pred HHHHhhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCC
Q 026706 135 SLVRNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNA 197 (234)
Q Consensus 135 ~~~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~ 197 (234)
.. ....+.+|+.+++|. .+++.++|+|+++.++.+++ .+++++..+-|
T Consensus 629 ~~---------~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~------~v~~i~s~~lP 678 (764)
T TIGR02865 629 LR---------STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA------KVEVIRSSNLP 678 (764)
T ss_pred hC---------CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC------EEEEecCCCce
Confidence 21 012368999888884 78999999999999998876 77777766554
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=97.17 E-value=0.012 Score=47.76 Aligned_cols=88 Identities=19% Similarity=0.153 Sum_probs=55.7
Q ss_pred CceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEE
Q 026706 80 QGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGII 159 (234)
Q Consensus 80 ~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li 159 (234)
+..++.|.|+.|---.|.+.+-.+...+....... .. ..+.+..+++.+...... ....+|++++.+
T Consensus 3 ~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-~~----p~~~l~~ln~~l~~~~~~--------~~~~~t~~~~~~ 69 (193)
T PF07228_consen 3 GRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-LD----PEELLEALNRRLYRDLKG--------DNRYATACYAII 69 (193)
T ss_dssp TEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-TS----HHHHHHHHHHHHHHHTTT--------TSTTEEEEEEEE
T ss_pred CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-CC----HHHHHHHHHHHHHHHhhh--------ccccceEEEEEe
Confidence 56788999999933334444555555555543222 22 333444556555433221 125778888886
Q ss_pred E--CCeEEEEEcCCCcEEEEeec
Q 026706 160 C--SGLLYIANAGDSRVVLGRME 180 (234)
Q Consensus 160 ~--~~~l~vANvGDSRavl~~~~ 180 (234)
. .++++++|+|++++++++.+
T Consensus 70 d~~~~~l~~~~aG~~~~l~~~~~ 92 (193)
T PF07228_consen 70 DPETGTLTYANAGHPPPLLLRPG 92 (193)
T ss_dssp ETTTTEEEEEEESSSEEEEEETT
T ss_pred cccceEEEEeCCCCCCEEEEecc
Confidence 5 67899999999999999984
No 19
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=32.07 E-value=37 Score=31.33 Aligned_cols=47 Identities=23% Similarity=0.236 Sum_probs=31.3
Q ss_pred CCceEEEEEE-ECC-------------eEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHHHcC
Q 026706 150 AGSCCLVGII-CSG-------------LLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALH 210 (234)
Q Consensus 150 ~GsTa~v~li-~~~-------------~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~g 210 (234)
.|..+++.+= .++ ....||+||+|-+++..- |+-|.--+++|+ .++|
T Consensus 337 ~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPA-----------sTTH~ql~~ee~---~~aG 397 (426)
T COG2873 337 KGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPA-----------STTHRQLSEEEQ---AAAG 397 (426)
T ss_pred CCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCc-----------ccchhcCCHHHH---HhcC
Confidence 5666776663 333 246899999998877654 666766666665 4555
No 20
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=27.38 E-value=93 Score=17.86 Aligned_cols=19 Identities=26% Similarity=0.426 Sum_probs=14.8
Q ss_pred CCeEEEEEcCCCcEEEEee
Q 026706 161 SGLLYIANAGDSRVVLGRM 179 (234)
Q Consensus 161 ~~~l~vANvGDSRavl~~~ 179 (234)
+++||++|-++..+.++..
T Consensus 3 ~~~lyv~~~~~~~v~~id~ 21 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDT 21 (42)
T ss_pred CCEEEEEeCCCCEEEEEEC
Confidence 5679999998887777653
No 21
>PF05785 CNF1: Rho-activating domain of cytotoxic necrotizing factor; InterPro: IPR008430 This entry represents several bacterial cytotoxic necrotizing factor proteins as well as related dermonecrotic toxin (DNT) from Bordetella species. Cytotoxic necrotizing factor 1 (CNF1) is a toxin whose structure from Escherichia coli revealed a 4-layer alpha/beta/beta/alpha structure containing mixed beta-sheets []. CNF1 is expressed in strains of E. coli causing uropathogenic and neonatal meningitis. CNF1 alters host cell actin cytoskeleton and promotes bacterial invasion of the blood-brain barrier endothelial cells []. CNF1 belongs to a unique group of large cytotoxins that cause constitutive activation of Rho guanosine triphosphatases (GTPases), which are key regulators of the actin cytoskeleton []. Bordetella dermonecrotic toxin (DNT) stimulates the assembly of actin stress fibres and focal adhesions by deamidating or polyaminating Gln63 of the small GTPase Rho. DNT is an A-B toxin composed of an N-terminal receptor-binding (B) domain and a C-terminal enzymatically active (A) domain [].; PDB: 1HZG_A 1HQ0_A.
Probab=25.90 E-value=78 Score=27.91 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=18.2
Q ss_pred CCCCceEEEEEEECCeEEEEEcCCC
Q 026706 148 ASAGSCCLVGIICSGLLYIANAGDS 172 (234)
Q Consensus 148 ~~~GsTa~v~li~~~~l~vANvGDS 172 (234)
..+|||.+++ ++++.+|.-|+|-+
T Consensus 130 ~LSGCT~i~A-~K~~~~y~~HtGk~ 153 (281)
T PF05785_consen 130 ALSGCTMIYA-RKDNYFYAYHTGKS 153 (281)
T ss_dssp -BSS-EEEEE-EETTEEEEEEEEES
T ss_pred ccCCCEEEEE-EcCCeEEEEEcCCC
Confidence 4588888764 78999999999965
No 22
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=21.21 E-value=1.6e+02 Score=15.98 Aligned_cols=19 Identities=32% Similarity=0.700 Sum_probs=15.1
Q ss_pred EEECCeEEEEEcCCCcEEE
Q 026706 158 IICSGLLYIANAGDSRVVL 176 (234)
Q Consensus 158 li~~~~l~vANvGDSRavl 176 (234)
+-.++.+||+-.+..|+..
T Consensus 9 v~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EETTSEEEEEECCCTEEEE
T ss_pred EeCCCCEEEEECCCCEEEE
Confidence 3478899999998888754
Done!