Query         026706
Match_columns 234
No_of_seqs    216 out of 1491
Neff          7.6 
Searched_HMMs 29240
Date          Mon Mar 25 20:07:42 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026706hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2pnq_A [pyruvate dehydrogenase 100.0 2.9E-32 9.8E-37  252.6  12.3  175   50-233    41-279 (467)
  2 2i0o_A Ser/Thr phosphatase; be 100.0 8.9E-31   3E-35  229.9  15.2  159   56-233    32-200 (304)
  3 3qn1_B Protein phosphatase 2C  100.0 6.1E-31 2.1E-35  234.4  14.0  176   47-233    13-223 (337)
  4 2j4o_A Mitogen-activated prote 100.0 1.3E-31 4.4E-36  244.0   9.5  187   33-233    12-240 (401)
  5 2irm_A Mitogen-activated prote 100.0 6.9E-31 2.3E-35  235.8  13.2  168   36-211     3-213 (358)
  6 3kdj_B Protein phosphatase 2C  100.0 5.2E-30 1.8E-34  226.2  15.8  167   47-233     8-194 (316)
  7 2isn_A NYSGXRC-8828Z, phosphat 100.0 4.2E-30 1.4E-34  231.3  15.4  158   50-233    15-234 (364)
  8 2iq1_A Protein phosphatase 2C  100.0 2.4E-29 8.2E-34  217.6  19.2  165   50-233    10-176 (274)
  9 2p8e_A PPM1B beta isoform vari 100.0 3.5E-30 1.2E-34  226.5  12.7  163   50-233    26-201 (307)
 10 2i44_A Serine-threonine phosph 100.0 3.8E-29 1.3E-33  221.0  17.5  169   51-233    25-217 (324)
 11 1a6q_A Phosphatase 2C; catalyt 100.0 1.6E-29 5.3E-34  229.0  14.4  163   50-233    24-194 (382)
 12 3d8k_A PP2C, protein phosphata 100.0 1.4E-29 4.6E-34  229.0  12.0  132   78-233    45-227 (377)
 13 4da1_A Protein phosphatase 1K, 100.0 1.1E-28 3.6E-33  223.9  17.9  181   33-233   107-290 (389)
 14 1txo_A Putative bacterial enzy  99.9 7.4E-24 2.5E-28  178.5  13.6  128   50-199     7-137 (237)
 15 2pk0_A Serine/threonine protei  99.9 7.4E-23 2.5E-27  173.7  14.5  133   50-200     8-146 (250)
 16 2j82_A TPPHA, protein serine-t  99.9 1.7E-22 5.9E-27  170.3  13.3  132   50-200     3-142 (240)
 17 2jfr_A Ser-Thr phosphatase MSP  99.8 1.1E-20 3.8E-25  158.7  10.7  120   50-199     8-134 (234)
 18 3rnr_A Stage II sporulation E   99.8 4.5E-20 1.5E-24  153.6  11.6  107   79-200     8-116 (211)
 19 3t91_A Stage II sporulation pr  98.8 1.4E-08 4.7E-13   85.2   7.3  113   58-197    20-134 (242)
 20 3pu9_A Protein serine/threonin  98.7 4.9E-07 1.7E-11   76.0  15.1  113   58-197    23-137 (242)
 21 3f79_A Probable two-component   98.2   9E-06 3.1E-10   68.4   9.8  119   56-197    46-170 (255)
 22 3zt9_A Serine phosphatase; hyd  97.7 0.00032 1.1E-08   56.6  11.2  104   57-194    15-120 (193)
 23 3ke6_A Protein RV1364C/MT1410;  95.2    0.21 7.1E-06   44.5  11.9  107   60-195    51-160 (399)
 24 3eq2_A Probable two-component   89.1     3.3 0.00011   36.0  10.8   96   80-195   202-307 (394)
 25 3out_A Glutamate racemase; str  26.1      29 0.00099   28.9   2.0   24   83-106     9-33  (268)
 26 1hq0_A CNF1, cytotoxic necroti  22.7      66  0.0023   27.3   3.5   24  148-172   143-166 (295)

No 1  
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.97  E-value=2.9e-32  Score=252.60  Aligned_cols=175  Identities=26%  Similarity=0.328  Sum_probs=134.6

Q ss_pred             eeeeeecCCCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhh------cc----------
Q 026706           50 FSMAVVQANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFT------SE----------  113 (234)
Q Consensus        50 ~s~a~~~~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~------~~----------  113 (234)
                      |.....+.|.+|||++.+....      .++..||||||||||+.+|+|++++|+.+|.+.+      ..          
T Consensus        41 ~~s~~g~~R~~nED~~~v~~~~------~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~  114 (467)
T 2pnq_A           41 FDSNRLPANAPIEDRRSATTCL------QTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRA  114 (467)
T ss_dssp             EEEEEECCSSSCCEEEEEEEES------SSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----
T ss_pred             EEeeccCCCCCCCCceeeeecc------CCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccc
Confidence            4455556699999999875321      1256899999999999999999999999886431      00          


Q ss_pred             ------------------------------------------ccccHHHHHHHHHHHHHHHHHHHHHhh------ccCCC
Q 026706          114 ------------------------------------------SCGISADVITRAFLETEEEFLSLVRNQ------WLNKP  145 (234)
Q Consensus       114 ------------------------------------------~~~~~~~~l~~af~~~d~~~~~~~~~~------~~~~~  145 (234)
                                                                ....+.++|++||..+|+.|.......      +...+
T Consensus       115 ~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~  194 (467)
T 2pnq_A          115 LLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVL  194 (467)
T ss_dssp             CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHH
T ss_pred             ccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Confidence                                                      001577899999999999998765321      00011


Q ss_pred             CCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEecCCeee
Q 026706          146 QIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWR  225 (234)
Q Consensus       146 ~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~R  225 (234)
                      ....+||||++++|.+++|||||||||||||++.+ .++.+.+++||.||+|.++.|++||.++||..+...+..++  |
T Consensus       195 ~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~-~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~--R  271 (467)
T 2pnq_A          195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQE-EDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQD--R  271 (467)
T ss_dssp             HHHHSEECEEEEEEETTEEEEEEESSCEEEEEEEC-TTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSS--S
T ss_pred             cCCCCcceEEEEEEECCEEEEEECCCceEEEEEec-CCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecC--c
Confidence            23458999999999999999999999999999974 45567899999999999999999999999854322223455  9


Q ss_pred             eceEEeec
Q 026706          226 VKGIIQVT  233 (234)
Q Consensus       226 V~G~l~vS  233 (234)
                      |+|.|+||
T Consensus       272 v~G~l~vt  279 (467)
T 2pnq_A          272 LLGLLMPF  279 (467)
T ss_dssp             BTTTBSSS
T ss_pred             cccccccc
Confidence            99988886


No 2  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.97  E-value=8.9e-31  Score=229.88  Aligned_cols=159  Identities=25%  Similarity=0.313  Sum_probs=126.0

Q ss_pred             cCCCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH
Q 026706           56 QANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLS  135 (234)
Q Consensus        56 ~~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~  135 (234)
                      +.|..|||++.+....      .++..||+|||||||+.+|+++++++++.|.+........+.++|+++|..+++.+.+
T Consensus        32 G~R~~nED~~~~~~~~------~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~  105 (304)
T 2i0o_A           32 GWRISQEDAHNCILNF------DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQ  105 (304)
T ss_dssp             ESSSCCCEEEEEEEEE------ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred             CCCCCccCEEEEEecc------CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHHHHHh
Confidence            3478899999875311      1367899999999999999999999999998754433456789999999999998865


Q ss_pred             HHHh----hcc------CCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHH
Q 026706          136 LVRN----QWL------NKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREE  205 (234)
Q Consensus       136 ~~~~----~~~------~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~R  205 (234)
                      ....    ...      .......+|||++++++.++++|+|||||||+|+++.+      ++++||.||+|.++.|++|
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g------~~~~LT~DH~~~~~~e~~r  179 (304)
T 2i0o_A          106 EKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG------KALEMSFDHKPEDTVEYQR  179 (304)
T ss_dssp             HHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETT------EEEECCCCCCTTSHHHHHH
T ss_pred             hhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECC------EEEEcCCCcCCcCHHHHHH
Confidence            4211    000      01114569999999999999999999999999999998      9999999999999999999


Q ss_pred             HHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706          206 LRALHPDDPQIVVLKHKVWRVKGIIQVT  233 (234)
Q Consensus       206 I~~~gg~~~~ivv~~~g~~RV~G~l~vS  233 (234)
                      |.+.||.     +...|  ||+|.+++|
T Consensus       180 I~~~gg~-----v~~~~--rv~g~l~lt  200 (304)
T 2i0o_A          180 IEKAGGR-----VTLDG--RVNGGLNLS  200 (304)
T ss_dssp             HHHTTCC-----BCTTS--CBTTSCSCS
T ss_pred             HHhCCCE-----EEeCC--eEcCceecc
Confidence            9999862     22334  788776665


No 3  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.97  E-value=6.1e-31  Score=234.36  Aligned_cols=176  Identities=26%  Similarity=0.360  Sum_probs=136.0

Q ss_pred             ccceeeeeecC-CCCCCcceeeccCCC--------------CCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhh
Q 026706           47 SGEFSMAVVQA-NNQLEDCSQLESGPL--------------SSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFT  111 (234)
Q Consensus        47 ~g~~s~a~~~~-r~~~ED~~~v~~~~l--------------~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~  111 (234)
                      ++.|+.+++++ |..|||++.+.....              +......+..||+|||||||+.++++++++++..|.+.+
T Consensus        13 ~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~   92 (337)
T 3qn1_B           13 IPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEI   92 (337)
T ss_dssp             SCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred             cCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHH
Confidence            55678888888 567999999864311              001112257899999999999999999999999998754


Q ss_pred             ccc-------------cccHHHHHHHHHHHHHHHHHHHHHhhc-------cCCCCCCCCCceEEEEEEECCeEEEEEcCC
Q 026706          112 SES-------------CGISADVITRAFLETEEEFLSLVRNQW-------LNKPQIASAGSCCLVGIICSGLLYIANAGD  171 (234)
Q Consensus       112 ~~~-------------~~~~~~~l~~af~~~d~~~~~~~~~~~-------~~~~~~~~~GsTa~v~li~~~~l~vANvGD  171 (234)
                      ...             ...++++|+++|..+|+.+.....+..       ........+|||++++++.++++|+|||||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGD  172 (337)
T 3qn1_B           93 ERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGD  172 (337)
T ss_dssp             HHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESS
T ss_pred             HhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccC
Confidence            422             235678999999999999875431100       112234569999999999999999999999


Q ss_pred             CcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706          172 SRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWRVKGIIQVT  233 (234)
Q Consensus       172 SRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l~vS  233 (234)
                      ||+|+++.+      .+++||.||+|.++.|++||.+.|+    .+.. ...+|++|.+++|
T Consensus       173 SR~~l~r~g------~~~~lT~DH~~~~~~e~~ri~~~gg----~v~~-~~~~r~~g~l~~s  223 (337)
T 3qn1_B          173 SRAVLFRGK------EAMPLSVDHKPDREDEYARIENAGG----KVIQ-WQGARVFGVLAMS  223 (337)
T ss_dssp             CEEEEEETT------EEEESCCCCCTTSHHHHHHHHHTTC----CEEE-SSSEEETTTBSCS
T ss_pred             cEEEEEeCC------EeeeecCCCCCCCHHHHHHHHHcCC----eEEe-cCCceecCccccc
Confidence            999999998      9999999999999999999999995    3333 3336999988776


No 4  
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.97  E-value=1.3e-31  Score=243.99  Aligned_cols=187  Identities=21%  Similarity=0.201  Sum_probs=137.1

Q ss_pred             CCccCcccCCCCCcccceeeeeecC-CC--------CCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHH
Q 026706           33 VDGLLWYKDSGHHVSGEFSMAVVQA-NN--------QLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHL  103 (234)
Q Consensus        33 ~~~~~w~~~l~~~~~g~~s~a~~~~-r~--------~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l  103 (234)
                      +..-.|..+++.+..-.++.+..++ |.        +|||++++..       ..++..||||||||||+.+|+|++++|
T Consensus        12 ~~~~~~~~~~~~~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~-------~~~~~~lf~V~DGhGG~~aa~~as~~l   84 (401)
T 2j4o_A           12 EQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFR-------SENNCFLYGVFNGYDGNRVTNFVAQRL   84 (401)
T ss_dssp             ----CCTTTSCBCTTEEEEEECCEEECSSSSCEECCCCCEEEEEEE-------ETTTEEEEEEEEEESSSHHHHHHHHHH
T ss_pred             ccCCCccccccccccCceeEEecccccccccccCCCCCCceEEEec-------CCCCeEEEEEEcCCCCHHHHHHHHHHH
Confidence            3456899999977655555555555 33        5999998753       123678999999999999999999999


Q ss_pred             HHHHHhh-hcc--ccccHHHHHHHHHHHHHHHHHHHHHhhccC-------CC-----------------------CCCCC
Q 026706          104 FDNIKKF-TSE--SCGISADVITRAFLETEEEFLSLVRNQWLN-------KP-----------------------QIASA  150 (234)
Q Consensus       104 ~~~l~~~-~~~--~~~~~~~~l~~af~~~d~~~~~~~~~~~~~-------~~-----------------------~~~~~  150 (234)
                      +..|.+. +..  ....+.++|+++|..+++.|++........       .+                       ....+
T Consensus        85 ~~~l~~~~~~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (401)
T 2j4o_A           85 SAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISG  164 (401)
T ss_dssp             HHTTSSSSCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCC
Confidence            9988642 111  123578899999999999987754211100       00                       12358


Q ss_pred             CceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEecCCeeeeceEE
Q 026706          151 GSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWRVKGII  230 (234)
Q Consensus       151 GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l  230 (234)
                      |||+++++|.+++|||||||||||||++.+ .++ +++++||.||+|.++.|++||.++|+.     +......|++|.|
T Consensus       165 GtTa~~~li~~~~l~vanvGDSRa~l~r~~-~~g-~~~~~LT~DH~~~~~~E~~Ri~~~Gg~-----v~~~~~~r~~g~l  237 (401)
T 2j4o_A          165 GAMAVVAVLLNNKLYVANVGTNRALLCKST-VDG-LQVTQLNVDHTTENEDELFRLSQLGLD-----AGKIKQVGIICGQ  237 (401)
T ss_dssp             EEEEEEEEEETTEEEEEEESSCEEEEEEEC-SSS-EEEEECSCCCSTTSHHHHHHHHTTTCC-----HHHHHHHCCBTTB
T ss_pred             ccCEEEEEEECCEEEEEEccCceEEEEEcC-CCC-ceEEECCCCCCCCCHHHHHHHHHcCCC-----eeeccCccccCCc
Confidence            999999999999999999999999999986 333 589999999999999999999999962     1110112777766


Q ss_pred             eec
Q 026706          231 QVT  233 (234)
Q Consensus       231 ~vS  233 (234)
                      +||
T Consensus       238 ~vt  240 (401)
T 2j4o_A          238 EST  240 (401)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            655


No 5  
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.97  E-value=6.9e-31  Score=235.79  Aligned_cols=168  Identities=18%  Similarity=0.220  Sum_probs=127.3

Q ss_pred             cCcccCCCCCc-cccee-----eeeecCCC---CCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHH
Q 026706           36 LLWYKDSGHHV-SGEFS-----MAVVQANN---QLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDN  106 (234)
Q Consensus        36 ~~w~~~l~~~~-~g~~s-----~a~~~~r~---~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~  106 (234)
                      ..|..+++.+. .|...     ++..+.|+   +|||++++...       .++..||||||||||+.+|+|+++++++.
T Consensus         3 ~~~~~~~~~~~~~~~g~~~~~~~~~~G~r~~~~~nED~~~~~~~-------~~~~~lf~V~DGhGG~~aa~~as~~l~~~   75 (358)
T 2irm_A            3 KSWTDDLKVCNQTGVGEAINQIYKDDGRRCEGYESRDKKCLCIS-------DNNTSLYAILSGHNGVTVAENALQEMAAE   75 (358)
T ss_dssp             -CCGGGSCBCTTEEEEEECCEEECSSSCEEECSSCCEEEEEEEC-------SSSEEEEEEEEEESCSHHHHHHHHHHHHH
T ss_pred             CCcccccccCCCCCCcccccceeecCCCCCCCCCCCceEEEEEC-------CCCEEEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46888888885 22211     22233344   59999987532       24678999999999999999999999999


Q ss_pred             HHh-hhc--cccccHHHHHHHHHHHHHHHHHHHHHhhcc-------CC------------------------CCCCCCCc
Q 026706          107 IKK-FTS--ESCGISADVITRAFLETEEEFLSLVRNQWL-------NK------------------------PQIASAGS  152 (234)
Q Consensus       107 l~~-~~~--~~~~~~~~~l~~af~~~d~~~~~~~~~~~~-------~~------------------------~~~~~~Gs  152 (234)
                      |.+ .+.  .....+.++|+++|..+|+.+++...+...       ..                        .....+||
T Consensus        76 l~~~~l~~~~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~Gt  155 (358)
T 2irm_A           76 LLLGQLNVCNTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGS  155 (358)
T ss_dssp             SSSSTTTTCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEE
T ss_pred             HHHhhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCC
Confidence            876 222  122356889999999999999864321000       00                        01235999


Q ss_pred             eEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHHHcCC
Q 026706          153 CCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELRALHP  211 (234)
Q Consensus       153 Ta~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~gg  211 (234)
                      |+++++|.+++|||||||||||||++.. .++.+++++||.||+|.++.|++||.++|+
T Consensus       156 Tav~~li~~~~l~vAnvGDSRa~l~r~~-~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg  213 (358)
T 2irm_A          156 SAVLALIHRSHLYLGNIGNCRALLCKTD-EHDTLTVTQLSVDHNLLNAEEAARLFRLGL  213 (358)
T ss_dssp             EEEEEEEESSEEEEEEESSCEEEEEECC-TTCSCEEEECSCCCBTTSHHHHHHHHTTTC
T ss_pred             cEEEEEEECCEEEEEEcccCeEEEEEec-CCCceeeEeCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999999999999999999999983 334468999999999999999999999996


No 6  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.97  E-value=5.2e-30  Score=226.22  Aligned_cols=167  Identities=23%  Similarity=0.391  Sum_probs=130.1

Q ss_pred             ccceeeeeecC-CCCCCcceeeccCCCCC---------CCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhcccc-
Q 026706           47 SGEFSMAVVQA-NNQLEDCSQLESGPLSS---------LESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESC-  115 (234)
Q Consensus        47 ~g~~s~a~~~~-r~~~ED~~~v~~~~l~~---------~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~-  115 (234)
                      +-.|+.++.++ |..|||++.+.......         .....+..||+|||||||+.+++++++++++.|.+...... 
T Consensus         8 ~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~   87 (316)
T 3kdj_B            8 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKP   87 (316)
T ss_dssp             --CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            34577888887 66799999986432100         11123678999999999999999999999999987543321 


Q ss_pred             ---------ccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCce
Q 026706          116 ---------GISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEV  186 (234)
Q Consensus       116 ---------~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~  186 (234)
                               ..+.++|+++|..+++.+...         ....+|||++++++.++++|+|||||||+|++|.+      
T Consensus        88 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~---------~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g------  152 (316)
T 3kdj_B           88 MLSDGDTWLEKWKKALFNSFLRVDSEIESV---------APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK------  152 (316)
T ss_dssp             CGGGTHHHHHHHHHHHHHHHHHHHHHGGGT---------SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETT------
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHhcc---------cCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECC------
Confidence                     135677888888888777321         12468999999999999999999999999999998      


Q ss_pred             EEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706          187 KAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWRVKGIIQVT  233 (234)
Q Consensus       187 ~~~~LT~dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l~vS  233 (234)
                      ++++||.||+|.++.|++||.+.++    .+. ....+||.|.|+||
T Consensus       153 ~~~~lT~DH~~~~~~e~~ri~~~~g----~v~-~~~~~r~~g~l~~s  194 (316)
T 3kdj_B          153 TALPLSVDHKPDREDEAARIEAAGG----KVI-QWNGARVFGVLAMS  194 (316)
T ss_dssp             EEEESCCCCCTTSHHHHHHHHHTTC----CEE-ESSSEEETTTBSCS
T ss_pred             EecccCCCCCCCCHHHHHHHHHcCC----eEE-ecCCceEcceeccc
Confidence            9999999999999999999999985    233 33336999988876


No 7  
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.97  E-value=4.2e-30  Score=231.34  Aligned_cols=158  Identities=21%  Similarity=0.273  Sum_probs=125.1

Q ss_pred             eeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHH
Q 026706           50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLE  128 (234)
Q Consensus        50 ~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~  128 (234)
                      ++.+..++ |..|||++.+....    ...++..||+|||||||+.||+|++++|+.+|.+..    ....+.|+++|..
T Consensus        15 ~~~~s~~G~R~~nED~~~v~~~~----~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~----~~~~~~l~~a~~~   86 (364)
T 2isn_A           15 TVAATMLGRRPTDEDAILVSAPA----TSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS----EFTFAEVKKACLS   86 (364)
T ss_dssp             EEEEEECTTSSSCCEEEEEECC--------CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCS----SCCHHHHHHHHHH
T ss_pred             EEEEEcCCCCCcCCCeeEEeccC----CCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhh----cccHHHHHHHHHH
Confidence            44455555 77899999886321    234578999999999999999999999999987632    2346789999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCCceEEEEEEEC-----------------------------------------------
Q 026706          129 TEEEFLSLVRNQWLNKPQIASAGSCCLVGIICS-----------------------------------------------  161 (234)
Q Consensus       129 ~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~-----------------------------------------------  161 (234)
                      +|+.+++....       ...+|||++++++.+                                               
T Consensus        87 ~d~~i~~~~~~-------~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~  159 (364)
T 2isn_A           87 LDAEIIRKLGP-------KHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPR  159 (364)
T ss_dssp             HHHHHHHHHCS-------SSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCC
T ss_pred             HHHHHHHhccc-------CCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccccccc
Confidence            99999865432       135899999998852                                               


Q ss_pred             -------------CeEEEEEcCCCcEEEE-eecCCCCceEEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEecCCeeeec
Q 026706          162 -------------GLLYIANAGDSRVVLG-RMENDVKEVKAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWRVK  227 (234)
Q Consensus       162 -------------~~l~vANvGDSRavl~-~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~  227 (234)
                                   .++|||||||||||++ +++      ++++||+||+|.++.|++||.++||     .+...+.+||+
T Consensus       160 ~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g------~~~~LT~DH~~~~~~e~~rI~~~gG-----~v~~~~~~rv~  228 (364)
T 2isn_A          160 VPDVQQKTIPAGSFLVTAINIGDSRATLIHSDG------GLTRLSKDHKPNHPTEASRIEKAGG-----SVETFDVPRVD  228 (364)
T ss_dssp             CCCCEEEEECTTCEEEEEEEESSCEEEEECTTS------CEEECCCCCCTTSHHHHHHHHHTTC-----CEEESSSEEET
T ss_pred             cccccccccccCccEEEEEECccCEEEEEeeCC------EEEEcCcCCCCCCHHHHHHHHHcCC-----eEecCCCcccC
Confidence                         3899999999999999 556      8999999999999999999999985     33444678999


Q ss_pred             eEEeec
Q 026706          228 GIIQVT  233 (234)
Q Consensus       228 G~l~vS  233 (234)
                      |.|+||
T Consensus       229 g~l~lt  234 (364)
T 2isn_A          229 GVLALS  234 (364)
T ss_dssp             TTBSCS
T ss_pred             CceeeE
Confidence            987765


No 8  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.97  E-value=2.4e-29  Score=217.64  Aligned_cols=165  Identities=24%  Similarity=0.333  Sum_probs=130.3

Q ss_pred             eeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHH
Q 026706           50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLE  128 (234)
Q Consensus        50 ~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~  128 (234)
                      ++.++.++ |..|||++.+...       .++..+|+|||||||+.+|+++++.+.+.|.+.... ...+.++|+++|..
T Consensus        10 ~g~~s~~G~R~~nED~~~~~~~-------~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~-~~~~~~~l~~a~~~   81 (274)
T 2iq1_A           10 VGCASQIGKRKENEDRFDFAQL-------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-EKNLETLLTLAFLE   81 (274)
T ss_dssp             CEEEEECCSSSSCCEEEEEEEC-------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-CCCHHHHHHHHHHH
T ss_pred             EEEEecccCCCCccceEEEeeC-------CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc-cccHHHHHHHHHHH
Confidence            44444444 7889999988531       236789999999999999999999999999876543 45688999999999


Q ss_pred             HHHHHHHHHHhhccCCCCCCCCCceEEEEEEEC-CeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHHHHHHHH
Q 026706          129 TEEEFLSLVRNQWLNKPQIASAGSCCLVGIICS-GLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEFVREELR  207 (234)
Q Consensus       129 ~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~-~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~Er~RI~  207 (234)
                      +++.+.+.....  .......+|||++++++.+ .++|+|||||||+|+++++      ++++||.||+|.++.|++||+
T Consensus        82 ~~~~i~~~~~~~--~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g------~~~~lT~DH~~~~~~E~~Ri~  153 (274)
T 2iq1_A           82 IDKAFSSHARLS--ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG------KPMKLTIDHTPERKDEKERIK  153 (274)
T ss_dssp             HHHHHHHHHHC-----CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT------EEEECCCCCCTTSHHHHHHHH
T ss_pred             HHHHHHHHhhhc--cccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCC------EeeECCCCCCCcCHHHHHHHH
Confidence            999998765421  0123356899999999985 5999999999999999988      999999999999999999999


Q ss_pred             HcCCCCCCeEEecCCeeeeceEEeec
Q 026706          208 ALHPDDPQIVVLKHKVWRVKGIIQVT  233 (234)
Q Consensus       208 ~~gg~~~~ivv~~~g~~RV~G~l~vS  233 (234)
                      +++|   .+.....+.+||+|.+++|
T Consensus       154 ~~gG---~v~~~~~~~~~~~~~~~lt  176 (274)
T 2iq1_A          154 KCGG---FVAWNSLGQPHVNGRLAMT  176 (274)
T ss_dssp             HTTC---CEEECTTSCEEETTTBSCS
T ss_pred             HcCC---EEEcCCCCceeECCeEeec
Confidence            9885   2222233556787766654


No 9  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.96  E-value=3.5e-30  Score=226.46  Aligned_cols=163  Identities=23%  Similarity=0.365  Sum_probs=124.3

Q ss_pred             eeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhh--hccc----------cc
Q 026706           50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKF--TSES----------CG  116 (234)
Q Consensus        50 ~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~--~~~~----------~~  116 (234)
                      |+.++.++ |..|||++.+....   ....++..||+|||||||+.+|+++++++++.|.+.  +...          ..
T Consensus        26 ~~~~s~~G~R~~nED~~~~~~~~---~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~  102 (307)
T 2p8e_A           26 YGLSSMQGWRVEMEDAHTAVVGI---PHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVE  102 (307)
T ss_dssp             EEEEEEEETSSSCCEEEEEEEEE---TTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------CHH
T ss_pred             EEEEecCCCCCcccceEEEEecC---CCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccccHH
Confidence            33344444 78899999875321   001135689999999999999999999999999762  1111          12


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCC
Q 026706          117 ISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHN  196 (234)
Q Consensus       117 ~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~  196 (234)
                      .+.++|+++|..+++.+.+....    .+....+|||++++++.++++|+|||||||+|+++.+      ++++||+||+
T Consensus       103 ~~~~~l~~a~~~~~~~i~~~~~~----~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g------~~~~lT~DH~  172 (307)
T 2p8e_A          103 NVKNGIRTGFLKIDEYMRNFSDL----RNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG------QVCFSTQDHK  172 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSTTT----C---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT------EEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhh----ccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC------ccccCCCCCC
Confidence            45788999999999988754221    2233568999999999999999999999999999998      9999999999


Q ss_pred             CCCHHHHHHHHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706          197 ASMEFVREELRALHPDDPQIVVLKHKVWRVKGIIQVT  233 (234)
Q Consensus       197 ~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l~vS  233 (234)
                      |.++.|++||.+.|+    .+..    +||+|.|.+|
T Consensus       173 ~~~~~E~~rI~~~gg----~v~~----~rv~g~l~lt  201 (307)
T 2p8e_A          173 PCNPREKERIQNAGG----SVMI----QRVNGSLAVS  201 (307)
T ss_dssp             TTSHHHHHHHHHTTC----CEET----TEETTTBSCS
T ss_pred             CCCHHHHHHHHHcCC----EEEe----CcccCeEecc
Confidence            999999999999985    2332    2888877665


No 10 
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.96  E-value=3.8e-29  Score=220.95  Aligned_cols=169  Identities=16%  Similarity=0.224  Sum_probs=124.5

Q ss_pred             eeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhh--hcc--------------
Q 026706           51 SMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKF--TSE--------------  113 (234)
Q Consensus        51 s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~--~~~--------------  113 (234)
                      +.+..++ |+.|||++.+....   ....++..||+|||||||+.+|+++++++++.|.+.  +..              
T Consensus        25 ~~~s~~G~R~~nED~~~~~~~~---~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~~~~  101 (324)
T 2i44_A           25 AIFTDIGGRKHQEDRFTLCPQL---VPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEV  101 (324)
T ss_dssp             EEEEECTTSSSCCEEEEEESCC---STTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCHHHH
T ss_pred             EEEECCCCCCccCCeEEEEecC---CCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCcccc
Confidence            3344444 77899999887432   123456789999999999999999999999999773  110              


Q ss_pred             ---ccccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEe
Q 026706          114 ---SCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQ  190 (234)
Q Consensus       114 ---~~~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~  190 (234)
                         ....+.++|+++|..+|+.+.+...+.   ..  ...|+|++++++.++++|+|||||||+||++.+ ..+ +++++
T Consensus       102 ~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~---~~--~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~-~~g-~~~~~  174 (324)
T 2i44_A          102 DEKLPQLLDQAVDDMYKNADNELVKMCEQL---NK--DYASSTSVTAVLAKGFVAVGHLGDSRIAMGVET-PNG-LNCEF  174 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TC--SSCEECEEEEEEETTEEEEEEESSCEEEEEEEE-TTE-EEEEE
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHhhc---CC--CCCCCCeEEEEEECCeEEEEEccCceEEEEecc-CCC-ceEEE
Confidence               022457889999999999998776532   11  224555555569999999999999999999973 111 27999


Q ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCeEE----ecCCeeeeceEEeec
Q 026706          191 LSSEHNASMEFVREELRALHPDDPQIVV----LKHKVWRVKGIIQVT  233 (234)
Q Consensus       191 LT~dH~~~~~~Er~RI~~~gg~~~~ivv----~~~g~~RV~G~l~vS  233 (234)
                      ||.||+|.++.|++||.++||    .+.    ...+.+|+.|.|++|
T Consensus       175 LT~DH~~~~~~E~~Ri~~~Gg----~v~~~~~~~~~~~~~~g~l~~s  217 (324)
T 2i44_A          175 LTVDHKPDMPHEKLRIMRNGG----SVEYLHNHNNKPFIRGGDFSFR  217 (324)
T ss_dssp             SCCCCCTTSHHHHHHHHHTTC----EEECCTTCTTSCEEECTTHHHH
T ss_pred             CCCCCCCcCHHHHHHHHHcCC----EEEecccccCCCccccCcccch
Confidence            999999999999999999995    332    122345677776654


No 11 
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.96  E-value=1.6e-29  Score=228.96  Aligned_cols=163  Identities=26%  Similarity=0.400  Sum_probs=128.3

Q ss_pred             eeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhh--hcc-----ccccHHHH
Q 026706           50 FSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKF--TSE-----SCGISADV  121 (234)
Q Consensus        50 ~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~--~~~-----~~~~~~~~  121 (234)
                      |+.++.++ |..|||++.+....   ....++..||+|||||||+.+|+++++++++.|.+.  +..     ....+.++
T Consensus        24 ~g~~s~~G~R~~nEDa~~~~~~~---~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~~~  100 (382)
T 1a6q_A           24 YGLSSMQGWRVEMEDAHTAVIGL---PSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNG  100 (382)
T ss_dssp             EEEEEEEETSSSCCEEEEEEEEE---TTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHH
T ss_pred             EEEEecCCCCCCCCceeEEecCC---CCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHHHH
Confidence            44455555 78899999875321   001124689999999999999999999999999752  111     12345788


Q ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCHH
Q 026706          122 ITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASMEF  201 (234)
Q Consensus       122 l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~~  201 (234)
                      |+++|..+++.+.+....    .+....+|||+++++|.++++|+|||||||+|+++.+      ++++||.||+|.++.
T Consensus       101 l~~af~~~n~~i~~~~~~----~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g------~~~~LT~DHs~~~~~  170 (382)
T 1a6q_A          101 IRTGFLEIDEHMRVMSEK----KHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR------KVHFFTQDHKPSNPL  170 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHH----TTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT------EEEEECCCCCTTSHH
T ss_pred             HHHHHHHHHHHHHhhhhh----ccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECC------ceEEeCCCCCCCCHH
Confidence            999999999999876543    2334568999999999999999999999999999998      999999999999999


Q ss_pred             HHHHHHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706          202 VREELRALHPDDPQIVVLKHKVWRVKGIIQVT  233 (234)
Q Consensus       202 Er~RI~~~gg~~~~ivv~~~g~~RV~G~l~vS  233 (234)
                      |++||.++|+    .+..    +||+|.|+||
T Consensus       171 E~~RI~~~gg----~v~~----~Rv~g~l~lt  194 (382)
T 1a6q_A          171 EKERIQNAGG----SVMI----QRVNGSLAVS  194 (382)
T ss_dssp             HHHHHHHTTC----CEET----TEETTTBSCS
T ss_pred             HHHHHHhcCc----EEec----ccccCceeee
Confidence            9999999985    3332    2888877665


No 12 
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.96  E-value=1.4e-29  Score=229.01  Aligned_cols=132  Identities=21%  Similarity=0.353  Sum_probs=114.1

Q ss_pred             CCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEE
Q 026706           78 GPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVG  157 (234)
Q Consensus        78 ~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~  157 (234)
                      .++..||||||||||+.+|+|++++++..|.+..    ....++|+++|.++|+.+.+...          .+|||++++
T Consensus        45 ~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~----~~~~~al~~af~~~d~~l~~~~~----------~~GtTa~~~  110 (377)
T 3d8k_A           45 RPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR----DVNEEEITRQFERMDGDLRAANL----------PGGSSALII  110 (377)
T ss_dssp             CTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS----SSSHHHHHHHHHHHHHHHHHHTC----------CCCBCEEEE
T ss_pred             CCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc----ccHHHHHHHHHHHHHHHHHhccc----------CCCCceEEE
Confidence            4578899999999999999999999999997632    34578999999999999986521          479999988


Q ss_pred             EEE---------------------------------------------------CCeEEEEEcCCCcEEEEeecCCCCce
Q 026706          158 IIC---------------------------------------------------SGLLYIANAGDSRVVLGRMENDVKEV  186 (234)
Q Consensus       158 li~---------------------------------------------------~~~l~vANvGDSRavl~~~~~~~~~~  186 (234)
                      ++.                                                   +++|||||||||||||++.+      
T Consensus       111 ~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~~~l~vanvGDSRa~l~r~g------  184 (377)
T 3d8k_A          111 FVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGIYTIHVASLGNSRCVLKSGR------  184 (377)
T ss_dssp             EEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCEEEEEEEEESSCEEEEEETT------
T ss_pred             EEeccccccccccccccccccccccccccccccccccccceeeecccccccccCCCeEEEEEcccceEEEEECC------
Confidence            874                                                   14899999999999999988      


Q ss_pred             EEEeCCCCCCCCCHHHHHHHHHcCCCCCCeEEecCCeeeeceEEeec
Q 026706          187 KAVQLSSEHNASMEFVREELRALHPDDPQIVVLKHKVWRVKGIIQVT  233 (234)
Q Consensus       187 ~~~~LT~dH~~~~~~Er~RI~~~gg~~~~ivv~~~g~~RV~G~l~vS  233 (234)
                      ++++||.||+|.++.|++||.++|+    .+....|.|||+|.|+||
T Consensus       185 ~~~~LT~DH~~~~~~E~~RI~~~gg----~v~~~~g~~rv~G~l~vt  227 (377)
T 3d8k_A          185 TAIHLSTPHTASSHKERHRVQAAGG----VFTTVNGELLLGGVVPMT  227 (377)
T ss_dssp             EEEESSCCCSSSSHHHHHHHHTTTC----CEEECSSSEEETTTBSCS
T ss_pred             EEEECCcCCCCCCHHHHHHHHHcCC----EEEecCCcEEEcCceecc
Confidence            9999999999999999999999985    344457889999999887


No 13 
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.96  E-value=1.1e-28  Score=223.89  Aligned_cols=181  Identities=24%  Similarity=0.294  Sum_probs=135.3

Q ss_pred             CCccCcccCCCCCcccceeeeeecC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhh
Q 026706           33 VDGLLWYKDSGHHVSGEFSMAVVQA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFT  111 (234)
Q Consensus        33 ~~~~~w~~~l~~~~~g~~s~a~~~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~  111 (234)
                      .--+.|..+++....-.++.++.++ |..|||++.+...       .++..+|+|||||||+.+++++++.+...|.+..
T Consensus       107 n~~~~~g~p~p~~~~~~~g~~s~~G~R~~NED~~~~~~~-------~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~  179 (389)
T 4da1_A          107 NLYFQAGKPIPKISLENVGCASQIGKRKENEDRFDFAQL-------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLL  179 (389)
T ss_dssp             ------------CCGGGCEEEEECTTSSSCCEEEEEEEC-------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeEcCcCCcccceeEEEecCCCCCCCCcceeeeeec-------CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence            4445566677777666677777766 7789999988532       2367899999999999999999999999998866


Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECC-eEEEEEcCCCcEEEEeecCCCCceEEEe
Q 026706          112 SESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSG-LLYIANAGDSRVVLGRMENDVKEVKAVQ  190 (234)
Q Consensus       112 ~~~~~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~-~l~vANvGDSRavl~~~~~~~~~~~~~~  190 (234)
                      .. ...+.++|+++|..+++.+.+.....  .......+|||++++++.++ ++|+|||||||+|++|.+      ++++
T Consensus       180 ~~-~~~~~~~l~~a~~~~n~~i~~~~~~~--~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g------~~~~  250 (389)
T 4da1_A          180 PK-EKNLETLLTLAFLEIDKAFSSHARLS--ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG------KPMK  250 (389)
T ss_dssp             TT-CCCHHHHHHHHHHHHHHHHHHHHHHS--SCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT------EEEE
T ss_pred             cc-ccCHHHHHHHHHHHHHHHHHHHhhhc--cccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECC------EeEE
Confidence            54 45688999999999999998765432  11123458999999999876 999999999999999998      9999


Q ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCeEE-ecCCeeeeceEEeec
Q 026706          191 LSSEHNASMEFVREELRALHPDDPQIVV-LKHKVWRVKGIIQVT  233 (234)
Q Consensus       191 LT~dH~~~~~~Er~RI~~~gg~~~~ivv-~~~g~~RV~G~l~vS  233 (234)
                      ||.||+|.++.|++||.+.||    .+. ...+.+|+.|.+++|
T Consensus       251 LT~DHs~~~~~E~~Ri~~~gG----~v~~~~~~~~~~~g~l~lt  290 (389)
T 4da1_A          251 LTIDHTPERKDEKERIKKCGG----FVAWNSLGQPHVNGRLAMT  290 (389)
T ss_dssp             CCCCCCTTSHHHHHHHHHHTC----CEECC---CCEETTTBSCS
T ss_pred             eCCCCCCCCHHHHHHHHHcCC----eEecccCCCccCCCeEeeE
Confidence            999999999999999999985    232 223345777766665


No 14 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.91  E-value=7.4e-24  Score=178.53  Aligned_cols=128  Identities=16%  Similarity=0.220  Sum_probs=105.8

Q ss_pred             eeeeeecC--CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccc-cccHHHHHHHHH
Q 026706           50 FSMAVVQA--NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSES-CGISADVITRAF  126 (234)
Q Consensus        50 ~s~a~~~~--r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~-~~~~~~~l~~af  126 (234)
                      |+.++.++  |..|||++++            +..+|+|||||||+.+++++++.+.+.|.+..... ...+.+.|+++|
T Consensus         7 ~~~~s~~G~~r~~nED~~~~------------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~   74 (237)
T 1txo_A            7 YAARSDRGLVRANNEDSVYA------------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAV   74 (237)
T ss_dssp             EEEEEECCSSCSSCCEEEEE------------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHH
T ss_pred             EEEecCCCCCCCcCCCcccc------------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHH
Confidence            33444444  7889999976            24699999999999999999999999998865422 346789999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCC
Q 026706          127 LETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASM  199 (234)
Q Consensus       127 ~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~  199 (234)
                      ..+++.+.+....    .+....+|||++++++.++++|++|+||||+|+++.+      ++++||.||+|.+
T Consensus        75 ~~~~~~i~~~~~~----~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g------~~~~lt~dh~~~~  137 (237)
T 1txo_A           75 RAGNSAIAAQVEM----EPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDG------ELTQITKDDTFVQ  137 (237)
T ss_dssp             HHHHHHHHHHHHH----CGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETT------EEEECSCCCBHHH
T ss_pred             HHHHHHHHHHHhh----CCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCC------EeEEeCCCCCHHH
Confidence            9999999876653    2223458999999999999999999999999999987      8999999999753


No 15 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.89  E-value=7.4e-23  Score=173.71  Aligned_cols=133  Identities=16%  Similarity=0.185  Sum_probs=107.1

Q ss_pred             eeeeeecC--CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHH-hhhccc---cccHHHHHH
Q 026706           50 FSMAVVQA--NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIK-KFTSES---CGISADVIT  123 (234)
Q Consensus        50 ~s~a~~~~--r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~-~~~~~~---~~~~~~~l~  123 (234)
                      ++.++.++  |+.|||++.+....       ++..+|+|||||||+.+++++++.+.+.|. ++....   ...+.+.|+
T Consensus         8 ~~~~s~~G~~r~~neD~~~~~~~~-------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~   80 (250)
T 2pk0_A            8 ISLLTDIGQRRSNNQDFINQFENK-------AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWML   80 (250)
T ss_dssp             EEEEEECCTTCSCCCEEEEEEECT-------TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHH
T ss_pred             EEEecCCCCCCCcCCCceEeccCC-------CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHH
Confidence            34444444  67899999876432       357899999999999999999999999988 443322   234677899


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCH
Q 026706          124 RAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME  200 (234)
Q Consensus       124 ~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~  200 (234)
                      ++|..+++.+.+.....    + ...+|||++++++.++++|++|+||||+|+++.+      ++++||.||+|.++
T Consensus        81 ~~~~~~~~~l~~~~~~~----~-~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g------~~~~lt~dh~~~~~  146 (250)
T 2pk0_A           81 VSIETENRKIYELGQSD----D-YKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQG------EYHLLTSDHSLVNE  146 (250)
T ss_dssp             HHHHHHHHHHHHHHHHT----T-CTTCEECEEEEEEETTEEEEEEESSCEEEEEETT------EEEECCCCCBHHHH
T ss_pred             HHHHHHHHHHHHHHhhC----C-CCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCC------cEEEeCCCCCHHHH
Confidence            99999999998775532    2 3458999999999999999999999999999987      89999999998654


No 16 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.88  E-value=1.7e-22  Score=170.29  Aligned_cols=132  Identities=19%  Similarity=0.248  Sum_probs=100.5

Q ss_pred             eeeeeecC--CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccc----cccHHHHHH
Q 026706           50 FSMAVVQA--NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSES----CGISADVIT  123 (234)
Q Consensus        50 ~s~a~~~~--r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~----~~~~~~~l~  123 (234)
                      |+.++.++  |+.|||++ +...+       ... +|+|||||||..+++++++.+.+.|.+.....    ...+.+.|+
T Consensus         3 ~~~~s~~G~~r~~neD~~-~~~~~-------~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~   73 (240)
T 2j82_A            3 VAGLTDCGLIRKSNQDAF-YIDEK-------HQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLR   73 (240)
T ss_dssp             EEEEEECCSSCSSCCEEE-EECTT-------TCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred             EEEeCCCCCCCCcCCCcc-EecCC-------CCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHH
Confidence            33444444  67899999 65322       234 99999999999888888888887776644322    346788899


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCH
Q 026706          124 RAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME  200 (234)
Q Consensus       124 ~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~  200 (234)
                      ++|..+++.+.+....    .+....+|||++++++.  ++++|++|+||||+|+++.+      ++++||.||+|.++
T Consensus        74 ~~~~~~~~~l~~~~~~----~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~------~~~~lt~dh~~~~~  142 (240)
T 2j82_A           74 QAFLAANHAIVEQQRQ----NSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKD------QLQQITSDHTWIAQ  142 (240)
T ss_dssp             HHHHHHHHHHHHHHTT----SCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETT------EEEECSCCCBHHHH
T ss_pred             HHHHHHHHHHHHHhhc----ccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCC------EEEEECCCCcHHHH
Confidence            9999999999876542    23344579999999999  99999999999999999987      89999999998544


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.83  E-value=1.1e-20  Score=158.71  Aligned_cols=120  Identities=18%  Similarity=0.176  Sum_probs=96.5

Q ss_pred             eeeeee-cC-CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCCh--HHHHHHHHHHHHHHHhhhccccccHHHHHHHH
Q 026706           50 FSMAVV-QA-NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGP--EAARFVNDHLFDNIKKFTSESCGISADVITRA  125 (234)
Q Consensus        50 ~s~a~~-~~-r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~--~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~a  125 (234)
                      ++..+. +. |+.|||++++            +..+|+|||||||+  .+|+++.+.+...+.+.    . . .+.++++
T Consensus         8 ~~~~s~~G~~r~~neD~~~~------------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~-~-~~~l~~~   69 (234)
T 2jfr_A            8 AATATDQGPVRENNQDACLA------------DGILYAVADGFGARGHHASATALKTLSAGFAAA----P-D-RDGLLEA   69 (234)
T ss_dssp             EEEEEECCSSCSSCCEEEEE------------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----C-S-HHHHHHH
T ss_pred             EEEecCCCCCCCcCCCccee------------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----C-c-HHHHHHH
Confidence            333444 44 6889999965            24699999999966  88899888888877653    1 2 7889999


Q ss_pred             HHHHHHHHHHHHHhhccCCCCCCCCCceEEEEEEECCe---EEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCC
Q 026706          126 FLETEEEFLSLVRNQWLNKPQIASAGSCCLVGIICSGL---LYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASM  199 (234)
Q Consensus       126 f~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~---l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~  199 (234)
                      |..+++.+.+....    .+.  .+|||++++++.+++   +|++|+||||+|+++.+      ++++||.||+|.+
T Consensus        70 ~~~~~~~l~~~~~~----~~~--~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g------~~~~lt~dh~~~~  134 (234)
T 2jfr_A           70 VQQANLRVFELLGD----EPT--VSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDG------HMEQLTDDHSVAG  134 (234)
T ss_dssp             HHHHHHHHHHHHTT----SSS--CCEECEEEEECCCGGGTSCEEEEESSCCEEEEETT------EEEECSCCCBHHH
T ss_pred             HHHHHHHHHHhhcc----CCC--CCCccEEEEEEECCCccEEEEEEEccCceEEEECC------EEEEeCCCCCHHH
Confidence            99999999876432    121  289999999999998   99999999999999987      8999999999854


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.82  E-value=4.5e-20  Score=153.60  Aligned_cols=107  Identities=21%  Similarity=0.222  Sum_probs=88.5

Q ss_pred             CCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCceEEEEE
Q 026706           79 PQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGSCCLVGI  158 (234)
Q Consensus        79 ~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~GsTa~v~l  158 (234)
                      ++..+|+|+|||||+.+++++++.+.+.|.+.......     +.+++..+++.+.+....    .+....+|||+++++
T Consensus         8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~-----~~~~~~~an~~l~~~~~~----~~~~~~~GtT~~~~~   78 (211)
T 3rnr_A            8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS-----PLDAVLAAQAAVHRWASQ----GGILGRTGATMAVAA   78 (211)
T ss_dssp             TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC-----HHHHHHHHHHHHHHHHHH----TTCTTSCCEEEEEEE
T ss_pred             CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHhh----ccCCCCcchhheeee
Confidence            47889999999999999999998888888775543332     257788888888776543    344556999999999


Q ss_pred             EE--CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCCCCH
Q 026706          159 IC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNASME  200 (234)
Q Consensus       159 i~--~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~~~~  200 (234)
                      +.  ++++|++|+||||+|+++++      ++++||.||++.++
T Consensus        79 i~~~~~~~~~anvGDSr~yl~r~g------~~~~lt~dh~~~~~  116 (211)
T 3rnr_A           79 VNLRDGTLEWASVGDCRVYLFKGG------RLSRLSLDHNVSSE  116 (211)
T ss_dssp             EETTTTEEEEEEESSCEEEEEETT------EEEECCCCCBHHHH
T ss_pred             eeeCCCEEEEEEEccCeEEEEeCC------EEEEECCCcHHHHH
Confidence            99  99999999999999999998      99999999997543


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=98.76  E-value=1.4e-08  Score=85.21  Aligned_cols=113  Identities=12%  Similarity=0.057  Sum_probs=67.5

Q ss_pred             CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHH
Q 026706           58 NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLV  137 (234)
Q Consensus        58 r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~~  137 (234)
                      +....|.+.+...+       .+..+|+|+||.|+...|.+++..+...|....... ..+    .+++..+++.+....
T Consensus        20 ~~v~GD~y~~~~~~-------~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~-~~~----~~~l~~~n~~l~~~~   87 (242)
T 3t91_A           20 GLVSGDSYSMMELG-------ARKYAAAISDGMGNGARAHFESNETIKLLEKILESG-IDE----KIAIKTINSILSLRT   87 (242)
T ss_dssp             CSCCSCEEEEEEET-------TTEEEEEEECC-----CCSEEECHHHHHHHHHHHHT-CCH----HHHHHHHHHHHTTC-
T ss_pred             cccCCcEEEEEEeC-------CCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhC-CCH----HHHHHHHHHHHHhcC
Confidence            56789998774322       245679999999855554444444444443322211 123    334445555553211


Q ss_pred             HhhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCC
Q 026706          138 RNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNA  197 (234)
Q Consensus       138 ~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~  197 (234)
                               ...+++|++++++.  +++++++|+|||++|+.+.+      .+++|+.++.|
T Consensus        88 ---------~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g------~~~~l~~~~~~  134 (242)
T 3t91_A           88 ---------TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGD------QVMKVQASNLP  134 (242)
T ss_dssp             ------------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETT------EEEECCCC---
T ss_pred             ---------CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECC------EEEEecCCCce
Confidence                     12468999999986  78999999999999999987      88888877655


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=98.69  E-value=4.9e-07  Score=76.04  Aligned_cols=113  Identities=14%  Similarity=0.136  Sum_probs=80.7

Q ss_pred             CCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHH
Q 026706           58 NNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLV  137 (234)
Q Consensus        58 r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~~  137 (234)
                      +....|.+.+...+       .+..+++|.||.|+...|..++..+...+........ .    ..+++..+|+.+....
T Consensus        23 ~~vgGD~y~~~~~~-------~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~-~----~~~~l~~~n~~l~~~~   90 (242)
T 3pu9_A           23 TRESGDTVELVERP-------GGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV-R----DGAAARAAHDFLYAMR   90 (242)
T ss_dssp             CSSCSEEEEEEECT-------TSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC-C----HHHHHHHHHHHHHHHT
T ss_pred             cccCCceEEEEEeC-------CCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC-C----HHHHHHHHHHHHHhcc
Confidence            45677988775322       2456699999999888888887776666655433221 2    2345566676664321


Q ss_pred             HhhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCCCC
Q 026706          138 RNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEHNA  197 (234)
Q Consensus       138 ~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH~~  197 (234)
                      .         ....+|++++++.  .++++++|+||+++|+.+.+      .+++|+.+|.|
T Consensus        91 ~---------~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g------~~~~l~~~~~~  137 (242)
T 3pu9_A           91 D---------GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNG------EFEQISESGGR  137 (242)
T ss_dssp             T---------TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETT------EEEEECCCCCC
T ss_pred             C---------CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECC------EEEEeCCCCcc
Confidence            1         1367999988885  67999999999999999987      89999998876


No 21 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.16  E-value=9e-06  Score=68.41  Aligned_cols=119  Identities=13%  Similarity=-0.006  Sum_probs=69.3

Q ss_pred             cCCCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhcc---ccccHHHHHHHHHHHHHHH
Q 026706           56 QANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSE---SCGISADVITRAFLETEEE  132 (234)
Q Consensus        56 ~~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~---~~~~~~~~l~~af~~~d~~  132 (234)
                      .++..--|.+-+...       .++..+++|.||.|+...|.+++..+...+......   ..........+.+..+|+.
T Consensus        46 p~~~vgGD~yd~~~~-------~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~  118 (255)
T 3f79_A           46 PSLYLSGDFVDYFRV-------DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRG  118 (255)
T ss_dssp             CSSSSCSEEEEEEEE-------TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHHHHHHHH
T ss_pred             EhhhcCceEEeEEEe-------CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHH
Confidence            345566777643321       125678999999995555555555444444332111   0011122244555666766


Q ss_pred             HHHHHHhhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCC-CcEEEEeecCCCCceEEEeCCCCCCC
Q 026706          133 FLSLVRNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGD-SRVVLGRMENDVKEVKAVQLSSEHNA  197 (234)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGD-SRavl~~~~~~~~~~~~~~LT~dH~~  197 (234)
                      +.+.          ...+++|++++++.  .++++++|+|+ ++.++.+.+      .+.+++.+|.|
T Consensus       119 l~~~----------~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g------~~~~l~~~~~~  170 (255)
T 3f79_A          119 LINT----------KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG------QAGYLEGRGLP  170 (255)
T ss_dssp             HBTT----------BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--------CEEECCC----
T ss_pred             HHhc----------CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCC------eEEEeCCCCce
Confidence            6431          12479999999994  67999999999 568888876      78888888765


No 22 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=97.73  E-value=0.00032  Score=56.63  Aligned_cols=104  Identities=13%  Similarity=0.112  Sum_probs=69.4

Q ss_pred             CCCCCCcceeeccCCCCCCCCCCCceEEEEecCCCChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHH
Q 026706           57 ANNQLEDCSQLESGPLSSLESGPQGTFVGIYDGHGGPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSL  136 (234)
Q Consensus        57 ~r~~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHGG~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~  136 (234)
                      +.....|.+.+....        +..+++|.||.|....|..++..+...|.+.   ....+.+.    +..+|+.+.. 
T Consensus        15 ~~~v~GD~y~~~~~~--------~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~---~~~~p~~i----l~~ln~~l~~-   78 (193)
T 3zt9_A           15 GEIACGDACLVKRVE--------GVIFLAVGDGIGHGPEAARAAEIAIASMESS---MNTGLVNI----FQLCHRELRG-   78 (193)
T ss_dssp             TCSSCSEEEEEEEET--------TEEEEEEEEESSSHHHHHHHHHHHHHHHHHH---TTSCHHHH----HHHHHHHHTT-
T ss_pred             CCCCCCCeEEEEEeC--------CEEEEEEEeCCCCCHHHHHHHHHHHHHHHHc---ccCCHHHH----HHHHHHHHhc-
Confidence            355678888775322        6788999999996665666666666666552   11233333    3445554421 


Q ss_pred             HHhhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCC
Q 026706          137 VRNQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSE  194 (234)
Q Consensus       137 ~~~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~d  194 (234)
                                  ..|+|++++.+.  .+++.++|+|+++.++.+.+      ..+++...
T Consensus        79 ------------~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~------~~~~l~~~  120 (193)
T 3zt9_A           79 ------------TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAK------GIITPLAT  120 (193)
T ss_dssp             ------------SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETT------EEECCCCB
T ss_pred             ------------cCceEEEEEEEECCCCEEEEEecCCceEEEEcCC------cEEEecCC
Confidence                        247888888887  66999999999999999986      55555433


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=95.23  E-value=0.21  Score=44.52  Aligned_cols=107  Identities=19%  Similarity=0.105  Sum_probs=63.7

Q ss_pred             CCCcceeeccCCCCCCCCCCCceEEEEecCCC-ChHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHH
Q 026706           60 QLEDCSQLESGPLSSLESGPQGTFVGIYDGHG-GPEAARFVNDHLFDNIKKFTSESCGISADVITRAFLETEEEFLSLVR  138 (234)
Q Consensus        60 ~~ED~~~v~~~~l~~~~~~~~~~~~gV~DGHG-G~~aa~~~~~~l~~~l~~~~~~~~~~~~~~l~~af~~~d~~~~~~~~  138 (234)
                      .--|.|-+...+        +..+++|.|+.| |-.+| +++..+...|...... ...+.++    +..+|+ +..   
T Consensus        51 vgGD~y~~~~~~--------~~~~~~v~Dv~GhGv~AA-~~~~~~~~~l~~~~~~-~~~p~~i----l~~ln~-~~~---  112 (399)
T 3ke6_A           51 AGGDWFDALALG--------DRLVLVVGDVVGHGVEAA-AVMSQLRTALRMQISA-GYTVVEA----LEAVDR-FHK---  112 (399)
T ss_dssp             CCSEEEEEEECS--------SEEEEEEEECSSCSHHHH-HHHHHHHHHHHHHHHT-TCCHHHH----HHHHHH-HGG---
T ss_pred             CCCceEEEEEEC--------CEEEEEEEEecCCCHHHH-HHHHHHHHHHHHHHhc-CCCHHHH----HHHHHH-HHH---
Confidence            346777665333        478899999888 55554 3334444444443221 2233333    334444 221   


Q ss_pred             hhccCCCCCCCCCceEEEEEEE--CCeEEEEEcCCCcEEEEeecCCCCceEEEeCCCCC
Q 026706          139 NQWLNKPQIASAGSCCLVGIIC--SGLLYIANAGDSRVVLGRMENDVKEVKAVQLSSEH  195 (234)
Q Consensus       139 ~~~~~~~~~~~~GsTa~v~li~--~~~l~vANvGDSRavl~~~~~~~~~~~~~~LT~dH  195 (234)
                      .    .  ....++|++++++.  .+++.++|.|....++.+.+     .....+..++
T Consensus       113 ~----~--~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~-----g~~~~l~~~~  160 (399)
T 3ke6_A          113 Q----V--PGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTAD-----ASARYVEPTG  160 (399)
T ss_dssp             G----S--TTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTT-----SCEEECCCCS
T ss_pred             h----c--CCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCC-----CCEEEeecCC
Confidence            1    1  12368898888885  67999999999999999843     1455565544


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=89.07  E-value=3.3  Score=36.01  Aligned_cols=96  Identities=15%  Similarity=0.030  Sum_probs=51.4

Q ss_pred             CceEEEEecCCC-ChHHHH---HHHHHHHHHHHhhhc---cccccHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCc
Q 026706           80 QGTFVGIYDGHG-GPEAAR---FVNDHLFDNIKKFTS---ESCGISADVITRAFLETEEEFLSLVRNQWLNKPQIASAGS  152 (234)
Q Consensus        80 ~~~~~gV~DGHG-G~~aa~---~~~~~l~~~l~~~~~---~~~~~~~~~l~~af~~~d~~~~~~~~~~~~~~~~~~~~Gs  152 (234)
                      +..++.|.|+.| |-.+|-   .+...+...+.....   .....+.+    .+..+|+.+.+.       .   .....
T Consensus       202 ~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~l~~ln~~l~~~-------~---~~~~~  267 (394)
T 3eq2_A          202 RRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSE----VLAHINRGLINT-------K---LGKHV  267 (394)
T ss_dssp             TEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHHH----HHHHHHHHHHHT-------T---CCCCE
T ss_pred             CcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHHH----HHHHHHHHHhcc-------C---cCcEE
Confidence            457789999666 444442   222222222222110   01113333    344566666431       1   12568


Q ss_pred             eEEEEEEE--CCeEEEEEcCCCc-EEEEeecCCCCceEEEeCCCCC
Q 026706          153 CCLVGIIC--SGLLYIANAGDSR-VVLGRMENDVKEVKAVQLSSEH  195 (234)
Q Consensus       153 Ta~v~li~--~~~l~vANvGDSR-avl~~~~~~~~~~~~~~LT~dH  195 (234)
                      |++++++.  .+++.++|.|-.- .++.+.+      .+..|....
T Consensus       268 t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g------~~~~l~~~~  307 (394)
T 3eq2_A          268 TMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG------QAGYLEGRG  307 (394)
T ss_dssp             EEEEEEEETTTTEEEEEECSSSCCCEEEETT------EEEECCCC-
T ss_pred             EEEEEEEECCCCEEEEEcCCCCCCcEEecCC------ceEecCCCC
Confidence            88888886  6799999999754 5666655      566665443


No 25 
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=26.14  E-value=29  Score=28.90  Aligned_cols=24  Identities=25%  Similarity=0.475  Sum_probs=20.5

Q ss_pred             EEEEec-CCCChHHHHHHHHHHHHH
Q 026706           83 FVGIYD-GHGGPEAARFVNDHLFDN  106 (234)
Q Consensus        83 ~~gV~D-GHGG~~aa~~~~~~l~~~  106 (234)
                      -+|||| |.||-.+++.+.+.++..
T Consensus         9 pIgvfDSGvGGLtv~~~i~~~lp~~   33 (268)
T 3out_A            9 PIGVFDSGIGGLTIVKNLMSILPNE   33 (268)
T ss_dssp             CEEEEESSSTTHHHHHHHHHHCTTC
T ss_pred             cEEEEECCCChHHHHHHHHHHCCCC
Confidence            479999 999999999988887643


No 26 
>1hq0_A CNF1, cytotoxic necrotizing factor 1; beta sandwich, RHO deamidase, RHO transglutaminase, toxin; 1.83A {Escherichia coli} SCOP: d.194.1.1 PDB: 1hzg_A
Probab=22.74  E-value=66  Score=27.27  Aligned_cols=24  Identities=21%  Similarity=0.434  Sum_probs=19.4

Q ss_pred             CCCCceEEEEEEECCeEEEEEcCCC
Q 026706          148 ASAGSCCLVGIICSGLLYIANAGDS  172 (234)
Q Consensus       148 ~~~GsTa~v~li~~~~l~vANvGDS  172 (234)
                      ..+|||.+++ ++++.+|.-|+|-+
T Consensus       143 ~LSGCT~v~A-~K~~~ly~~HtGk~  166 (295)
T 1hq0_A          143 NLSGCTTIVA-RKEGYIYKVHTGTT  166 (295)
T ss_dssp             CBSSCEEEEE-EETTEEEEEEEEES
T ss_pred             cccCcEEEEE-EcCCeEEEEEcCCC
Confidence            4588887764 78999999999965


Done!