Query 026707
Match_columns 234
No_of_seqs 236 out of 1532
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 20:08:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2E-41 6.9E-46 301.8 19.1 223 7-232 7-237 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.1E-32 3.7E-37 247.8 19.4 221 11-232 6-247 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 3.7E-31 1.3E-35 236.4 20.0 220 11-232 5-235 (456)
4 2acv_A Triterpene UDP-glucosyl 100.0 1.6E-30 5.6E-35 232.6 19.5 212 12-232 8-233 (463)
5 2vch_A Hydroquinone glucosyltr 100.0 4.9E-30 1.7E-34 230.4 20.1 217 11-232 4-228 (480)
6 2iya_A OLEI, oleandomycin glyc 99.8 2.6E-18 9E-23 151.1 12.7 134 5-147 4-141 (424)
7 4amg_A Snogd; transferase, pol 99.6 4.1E-15 1.4E-19 129.1 11.3 126 13-147 22-160 (400)
8 1iir_A Glycosyltransferase GTF 99.6 1.8E-15 6.3E-20 132.7 7.9 122 15-146 2-127 (415)
9 3ia7_A CALG4; glycosysltransfe 99.5 6.9E-14 2.4E-18 121.2 11.2 125 12-144 3-132 (402)
10 2iyf_A OLED, oleandomycin glyc 99.5 1.3E-13 4.3E-18 121.1 12.3 125 13-146 7-135 (430)
11 1rrv_A Glycosyltransferase GTF 99.4 6.7E-14 2.3E-18 122.7 6.4 121 15-146 2-128 (416)
12 3rsc_A CALG2; TDP, enediyne, s 99.4 2.4E-13 8E-18 118.8 9.3 126 12-145 19-149 (415)
13 2p6p_A Glycosyl transferase; X 99.3 8.9E-12 3.1E-16 107.7 10.8 124 15-146 2-138 (384)
14 2yjn_A ERYCIII, glycosyltransf 99.3 6.6E-12 2.3E-16 110.9 9.8 128 11-146 18-175 (441)
15 3oti_A CALG3; calicheamicin, T 99.2 4.3E-11 1.5E-15 104.0 11.8 121 13-145 20-160 (398)
16 3h4t_A Glycosyltransferase GTF 99.2 1.7E-11 5.8E-16 107.2 5.8 120 15-147 2-127 (404)
17 4fzr_A SSFS6; structural genom 99.2 8.4E-11 2.9E-15 102.1 9.0 128 11-146 13-154 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.1 1.8E-10 6.1E-15 99.6 9.2 122 14-146 2-145 (391)
19 3otg_A CALG1; calicheamicin, T 99.0 1.5E-09 5.2E-14 94.2 9.4 124 11-145 18-160 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.5 5.3E-07 1.8E-11 77.7 11.1 116 13-142 2-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 97.8 0.00013 4.3E-09 61.8 9.9 112 14-144 7-127 (364)
22 3fro_A GLGA glycogen synthase; 96.3 0.065 2.2E-06 45.7 13.0 129 13-144 2-153 (439)
23 3c48_A Predicted glycosyltrans 95.5 0.055 1.9E-06 46.5 8.6 124 10-145 17-154 (438)
24 2r60_A Glycosyl transferase, g 94.2 0.23 7.7E-06 43.6 9.3 121 13-144 7-151 (499)
25 2jjm_A Glycosyl transferase, g 93.4 0.76 2.6E-05 38.7 11.0 113 13-144 15-133 (394)
26 3okp_A GDP-mannose-dependent a 92.6 0.37 1.3E-05 40.3 7.7 110 11-144 2-117 (394)
27 2wqk_A 5'-nucleotidase SURE; S 87.0 7.6 0.00026 31.1 10.7 113 14-145 2-128 (251)
28 3s28_A Sucrose synthase 1; gly 85.2 1.9 6.6E-05 40.7 7.2 132 3-143 267-437 (816)
29 1v4v_A UDP-N-acetylglucosamine 84.2 3.7 0.00013 34.1 8.0 112 14-143 6-122 (376)
30 2x6q_A Trehalose-synthase TRET 83.7 2.1 7E-05 36.2 6.3 41 11-51 38-80 (416)
31 2iuy_A Avigt4, glycosyltransfe 83.5 1.4 4.6E-05 36.3 4.9 28 24-51 30-57 (342)
32 2yxb_A Coenzyme B12-dependent 81.5 1.6 5.5E-05 32.5 4.2 53 1-53 4-58 (161)
33 2iw1_A Lipopolysaccharide core 80.8 1.6 5.3E-05 36.2 4.3 37 15-51 2-41 (374)
34 2x0d_A WSAF; GT4 family, trans 80.6 1.3 4.6E-05 38.0 3.9 40 12-51 45-89 (413)
35 3hbm_A UDP-sugar hydrolase; PS 79.3 3.9 0.00013 33.4 6.1 86 22-144 13-101 (282)
36 2gek_A Phosphatidylinositol ma 77.5 3 0.0001 34.8 5.1 42 12-53 19-64 (406)
37 1y80_A Predicted cobalamin bin 76.4 3.9 0.00013 31.5 5.2 44 12-55 87-130 (210)
38 2phj_A 5'-nucleotidase SURE; S 74.7 20 0.00068 28.7 8.9 99 30-145 17-128 (251)
39 3dzc_A UDP-N-acetylglucosamine 74.4 7.9 0.00027 32.9 7.0 114 9-143 21-142 (396)
40 1ccw_A Protein (glutamate muta 72.9 6.1 0.00021 28.3 5.1 44 12-55 2-45 (137)
41 3vue_A GBSS-I, granule-bound s 71.1 5.4 0.00019 35.6 5.3 40 11-50 7-52 (536)
42 2i2x_B MTAC, methyltransferase 71.1 7 0.00024 31.3 5.5 45 11-55 121-165 (258)
43 1rzu_A Glycogen synthase 1; gl 70.2 4.6 0.00016 34.9 4.6 37 15-51 2-44 (485)
44 2qzs_A Glycogen synthase; glyc 68.5 5.4 0.00019 34.4 4.7 37 15-51 2-44 (485)
45 3ezx_A MMCP 1, monomethylamine 64.9 9.4 0.00032 29.7 5.0 46 11-56 90-135 (215)
46 3zqu_A Probable aromatic acid 64.4 9.1 0.00031 29.8 4.7 45 11-56 2-46 (209)
47 1psw_A ADP-heptose LPS heptosy 64.4 56 0.0019 26.5 10.7 101 15-141 2-106 (348)
48 2q5c_A NTRC family transcripti 61.4 10 0.00035 29.0 4.5 43 99-146 128-170 (196)
49 3qjg_A Epidermin biosynthesis 59.5 20 0.0007 26.9 5.8 42 14-56 6-47 (175)
50 4hwg_A UDP-N-acetylglucosamine 58.9 11 0.00038 32.0 4.7 106 20-143 15-124 (385)
51 3tov_A Glycosyl transferase fa 58.1 55 0.0019 27.0 8.9 105 12-141 7-115 (349)
52 1mvl_A PPC decarboxylase athal 57.8 21 0.00072 27.7 5.7 44 12-57 18-61 (209)
53 2r8r_A Sensor protein; KDPD, P 56.5 18 0.00062 28.5 5.2 41 11-51 4-44 (228)
54 1id1_A Putative potassium chan 56.1 8.8 0.0003 27.6 3.2 34 12-50 2-35 (153)
55 2lpm_A Two-component response 55.7 12 0.0004 26.3 3.7 40 101-142 41-85 (123)
56 2hy7_A Glucuronosyltransferase 55.4 11 0.00037 32.0 4.1 38 11-50 12-52 (406)
57 3lyu_A Putative hydrogenase; t 54.7 12 0.00043 26.7 3.8 39 13-54 18-56 (142)
58 2vqe_B 30S ribosomal protein S 54.3 82 0.0028 25.2 8.8 31 115-145 158-190 (256)
59 2yvu_A Probable adenylyl-sulfa 53.8 18 0.0006 26.7 4.7 50 1-50 1-50 (186)
60 2pju_A Propionate catabolism o 53.0 12 0.00042 29.3 3.7 41 99-144 140-180 (225)
61 3vot_A L-amino acid ligase, BL 49.9 61 0.0021 27.4 8.0 26 114-139 74-101 (425)
62 3p9x_A Phosphoribosylglycinami 48.2 23 0.00078 27.5 4.5 45 101-145 15-61 (211)
63 3gl9_A Response regulator; bet 46.5 37 0.0013 22.6 5.1 43 102-146 35-86 (122)
64 3zzm_A Bifunctional purine bio 46.3 67 0.0023 28.5 7.6 96 14-124 10-111 (523)
65 4ds3_A Phosphoribosylglycinami 45.8 29 0.00098 26.9 4.8 44 101-144 20-65 (209)
66 3to5_A CHEY homolog; alpha(5)b 45.7 22 0.00074 25.2 3.8 33 114-146 56-97 (134)
67 2ejb_A Probable aromatic acid 44.0 28 0.00097 26.4 4.4 43 14-57 2-44 (189)
68 1g63_A Epidermin modifying enz 43.8 35 0.0012 25.7 4.8 43 14-57 3-45 (181)
69 1lss_A TRK system potassium up 43.7 35 0.0012 23.3 4.7 33 13-50 4-36 (140)
70 4b4o_A Epimerase family protei 43.2 15 0.00053 29.3 3.0 26 23-50 8-33 (298)
71 3p0j_A Tyrosyl-tRNA synthetase 42.9 20 0.00068 33.1 3.9 44 9-52 378-426 (690)
72 3lrx_A Putative hydrogenase; a 42.8 20 0.00069 26.1 3.3 39 13-54 23-61 (158)
73 1sbz_A Probable aromatic acid 42.5 28 0.00096 26.7 4.2 42 15-57 2-44 (197)
74 3bul_A Methionine synthase; tr 41.7 33 0.0011 31.0 5.1 44 12-55 97-140 (579)
75 3ld9_A DTMP kinase, thymidylat 41.4 18 0.00062 28.2 3.0 48 1-48 9-57 (223)
76 3lqk_A Dipicolinate synthase s 41.1 40 0.0014 25.9 4.9 43 13-56 7-50 (201)
77 4g6h_A Rotenone-insensitive NA 40.9 17 0.00057 32.1 3.0 35 11-50 40-74 (502)
78 1meo_A Phosophoribosylglycinam 40.9 39 0.0013 26.1 4.8 45 101-145 13-59 (209)
79 1p3y_1 MRSD protein; flavoprot 39.4 25 0.00086 26.8 3.5 43 13-56 8-50 (194)
80 3kkj_A Amine oxidase, flavin-c 38.8 17 0.0006 27.3 2.6 18 31-48 15-32 (336)
81 3tqr_A Phosphoribosylglycinami 38.3 37 0.0013 26.3 4.4 44 101-144 18-62 (215)
82 1qzu_A Hypothetical protein MD 38.2 42 0.0014 25.8 4.6 46 11-57 17-63 (206)
83 3kcq_A Phosphoribosylglycinami 38.2 37 0.0013 26.3 4.4 44 101-144 21-66 (215)
84 3av3_A Phosphoribosylglycinami 36.8 43 0.0015 25.8 4.5 44 102-145 17-62 (212)
85 3mcu_A Dipicolinate synthase, 36.6 46 0.0016 25.7 4.6 40 13-53 5-45 (207)
86 3mc3_A DSRE/DSRF-like family p 36.2 61 0.0021 22.7 5.0 38 14-51 16-56 (134)
87 1kjn_A MTH0777; hypotethical p 35.8 23 0.00078 26.0 2.5 43 16-58 10-53 (157)
88 2ywr_A Phosphoribosylglycinami 35.5 53 0.0018 25.3 4.9 44 102-145 15-60 (216)
89 2gk4_A Conserved hypothetical 35.3 30 0.001 27.3 3.3 21 31-51 33-53 (232)
90 3sty_A Methylketone synthase 1 35.1 53 0.0018 24.6 4.9 44 5-49 4-47 (267)
91 3llv_A Exopolyphosphatase-rela 34.9 27 0.00091 24.4 2.8 33 13-50 6-38 (141)
92 3beo_A UDP-N-acetylglucosamine 33.8 40 0.0014 27.4 4.2 39 12-51 7-47 (375)
93 1jkx_A GART;, phosphoribosylgl 33.4 53 0.0018 25.3 4.5 44 101-144 13-58 (212)
94 3t6k_A Response regulator rece 32.7 61 0.0021 21.9 4.5 42 103-146 38-88 (136)
95 3auf_A Glycinamide ribonucleot 32.1 51 0.0017 25.8 4.3 31 115-145 51-81 (229)
96 1pq4_A Periplasmic binding pro 32.0 87 0.003 25.2 5.8 52 101-154 225-278 (291)
97 3ot5_A UDP-N-acetylglucosamine 32.0 32 0.0011 29.1 3.3 113 13-143 27-145 (403)
98 3fwz_A Inner membrane protein 30.6 37 0.0013 23.8 3.0 35 12-51 6-40 (140)
99 1p9o_A Phosphopantothenoylcyst 30.6 32 0.0011 28.4 3.0 23 30-52 68-90 (313)
100 3ruf_A WBGU; rossmann fold, UD 30.5 42 0.0014 27.3 3.7 44 2-50 15-58 (351)
101 3eag_A UDP-N-acetylmuramate:L- 30.3 58 0.002 26.6 4.6 33 13-49 4-36 (326)
102 2g1u_A Hypothetical protein TM 29.7 71 0.0024 22.6 4.5 33 13-50 19-51 (155)
103 1pno_A NAD(P) transhydrogenase 29.1 60 0.002 24.3 3.8 37 12-50 22-63 (180)
104 3qxc_A Dethiobiotin synthetase 29.0 95 0.0032 24.3 5.4 35 14-48 21-57 (242)
105 3f6p_A Transcriptional regulat 29.0 90 0.0031 20.4 4.7 44 102-147 35-84 (120)
106 3ug7_A Arsenical pump-driving 28.7 1E+02 0.0036 25.4 5.9 43 10-52 22-65 (349)
107 1d4o_A NADP(H) transhydrogenas 28.2 63 0.0022 24.3 3.8 36 13-50 22-62 (184)
108 1g5t_A COB(I)alamin adenosyltr 27.9 82 0.0028 24.0 4.7 97 12-124 27-129 (196)
109 3m6m_D Sensory/regulatory prot 27.3 63 0.0022 22.1 3.8 33 114-146 57-100 (143)
110 2fsv_C NAD(P) transhydrogenase 27.0 67 0.0023 24.6 3.8 36 13-50 46-86 (203)
111 3oy2_A Glycosyltransferase B73 26.9 64 0.0022 26.6 4.3 37 15-52 2-41 (413)
112 1djl_A Transhydrogenase DIII; 26.5 69 0.0023 24.6 3.8 36 13-50 45-85 (207)
113 1vgv_A UDP-N-acetylglucosamine 25.5 74 0.0025 25.9 4.4 35 15-50 2-37 (384)
114 2a33_A Hypothetical protein; s 25.3 1E+02 0.0036 23.7 4.9 36 11-46 11-50 (215)
115 1u7z_A Coenzyme A biosynthesis 25.2 56 0.0019 25.5 3.4 21 30-50 37-57 (226)
116 1xjc_A MOBB protein homolog; s 25.1 1.2E+02 0.0041 22.3 5.1 38 13-50 4-41 (169)
117 3ew7_A LMO0794 protein; Q8Y8U8 24.9 53 0.0018 24.4 3.2 20 31-50 14-33 (221)
118 1g8m_A Aicar transformylase-IM 24.8 88 0.003 28.2 4.8 38 28-73 16-53 (593)
119 4e5v_A Putative THUA-like prot 24.7 1.1E+02 0.0037 24.6 5.1 39 11-50 2-43 (281)
120 3slg_A PBGP3 protein; structur 24.7 65 0.0022 26.3 3.9 42 5-50 16-58 (372)
121 1xrs_B D-lysine 5,6-aminomutas 24.6 44 0.0015 26.9 2.6 46 11-56 118-172 (262)
122 2rjn_A Response regulator rece 24.5 1.2E+02 0.0041 20.8 4.9 44 102-147 40-90 (154)
123 3e8x_A Putative NAD-dependent 24.5 54 0.0018 24.9 3.2 34 13-50 21-54 (236)
124 3f67_A Putative dienelactone h 24.4 1.4E+02 0.0049 21.8 5.6 34 16-49 34-67 (241)
125 1tvm_A PTS system, galactitol- 24.4 81 0.0028 21.4 3.8 37 12-48 20-57 (113)
126 3pdi_B Nitrogenase MOFE cofact 24.1 96 0.0033 26.9 5.0 25 115-142 375-399 (458)
127 2bru_C NAD(P) transhydrogenase 24.0 66 0.0023 24.1 3.3 36 13-50 30-70 (186)
128 3gt7_A Sensor protein; structu 23.8 1.3E+02 0.0044 20.7 5.0 43 102-146 40-91 (154)
129 3h1g_A Chemotaxis protein CHEY 23.6 1.4E+02 0.0048 19.7 5.0 33 114-146 50-91 (129)
130 1uxo_A YDEN protein; hydrolase 23.6 1.1E+02 0.0039 21.6 4.8 39 12-50 3-42 (192)
131 3bos_A Putative DNA replicatio 23.6 1.7E+02 0.0059 21.6 6.0 44 11-54 50-93 (242)
132 3h2s_A Putative NADH-flavin re 23.4 55 0.0019 24.4 3.0 20 31-50 14-33 (224)
133 4ao6_A Esterase; hydrolase, th 23.1 1E+02 0.0034 23.8 4.6 38 13-50 55-94 (259)
134 3end_A Light-independent proto 22.9 1E+02 0.0034 24.6 4.7 37 15-51 43-79 (307)
135 3da8_A Probable 5'-phosphoribo 22.8 1E+02 0.0035 23.8 4.4 42 101-143 25-67 (215)
136 3cg0_A Response regulator rece 22.8 94 0.0032 20.7 3.9 44 102-147 43-93 (140)
137 3dm5_A SRP54, signal recogniti 22.7 1.1E+02 0.0036 26.6 4.9 39 15-53 102-140 (443)
138 3l3b_A ES1 family protein; ssg 22.6 1.7E+02 0.0058 22.8 5.8 50 1-51 9-65 (242)
139 2gt1_A Lipopolysaccharide hept 22.6 75 0.0026 25.5 3.8 43 15-57 2-46 (326)
140 3c3m_A Response regulator rece 22.5 1.2E+02 0.004 20.4 4.4 32 114-145 46-86 (138)
141 3a10_A Response regulator; pho 22.5 1.5E+02 0.0052 18.8 4.9 31 114-144 44-81 (116)
142 2rdm_A Response regulator rece 22.5 1.5E+02 0.0051 19.4 5.0 43 102-145 38-88 (132)
143 3d3k_A Enhancer of mRNA-decapp 22.1 62 0.0021 25.8 3.1 35 14-50 86-121 (259)
144 1hdo_A Biliverdin IX beta redu 22.0 62 0.0021 23.6 3.0 32 15-50 5-36 (206)
145 4as2_A Phosphorylcholine phosp 22.0 65 0.0022 26.6 3.3 25 27-51 145-169 (327)
146 2woo_A ATPase GET3; tail-ancho 21.9 1.6E+02 0.0053 24.0 5.7 39 14-52 19-58 (329)
147 3sbx_A Putative uncharacterize 21.8 1.5E+02 0.0051 22.4 5.1 38 7-45 7-48 (189)
148 1h3f_A Tyrosyl-tRNA synthetase 21.7 1.2E+02 0.0041 26.1 5.1 48 3-51 27-79 (432)
149 1y42_X Tyrosyl-tRNA synthetase 21.6 63 0.0021 27.6 3.2 33 18-51 71-106 (392)
150 1dbw_A Transcriptional regulat 21.6 1.7E+02 0.0059 19.0 5.8 43 102-146 36-85 (126)
151 4hb9_A Similarities with proba 21.4 59 0.002 26.7 3.0 17 31-47 14-30 (412)
152 2qr3_A Two-component system re 21.4 1.8E+02 0.0063 19.1 5.5 34 114-147 46-91 (140)
153 1yrb_A ATP(GTP)binding protein 21.4 1.3E+02 0.0045 23.0 5.0 41 11-52 12-52 (262)
154 2we8_A Xanthine dehydrogenase; 21.3 1.1E+02 0.0038 25.9 4.7 33 13-50 204-236 (386)
155 2ts1_A Tyrosyl-tRNA synthetase 21.3 87 0.003 27.0 4.0 46 3-50 21-71 (419)
156 1n3l_A Tyrosyl-tRNA synthetase 21.1 1.6E+02 0.0054 24.8 5.6 46 3-50 26-75 (372)
157 3oz2_A Digeranylgeranylglycero 21.1 52 0.0018 26.8 2.6 18 31-48 17-34 (397)
158 3jte_A Response regulator rece 21.1 1.3E+02 0.0045 20.1 4.5 33 114-146 48-87 (143)
159 3h5i_A Response regulator/sens 21.1 1.8E+02 0.0063 19.4 5.3 42 102-144 38-86 (140)
160 1jzt_A Hypothetical 27.5 kDa p 21.0 57 0.002 25.8 2.7 35 14-50 59-94 (246)
161 1zi8_A Carboxymethylenebutenol 21.0 1.8E+02 0.0061 21.2 5.5 33 16-49 31-63 (236)
162 3iqw_A Tail-anchored protein t 20.9 1.5E+02 0.0051 24.4 5.4 40 13-52 15-55 (334)
163 1p6q_A CHEY2; chemotaxis, sign 20.9 1.5E+02 0.0053 19.2 4.7 31 103-135 41-73 (129)
164 3bfv_A CAPA1, CAPB2, membrane 20.6 1.5E+02 0.005 23.4 5.1 41 12-52 80-122 (271)
165 3on5_A BH1974 protein; structu 20.4 1.2E+02 0.0042 25.5 4.7 33 13-51 199-232 (362)
166 2qxy_A Response regulator; reg 20.4 1.4E+02 0.0047 20.0 4.4 43 102-147 37-86 (142)
167 3d3j_A Enhancer of mRNA-decapp 20.4 69 0.0024 26.2 3.1 35 14-50 133-168 (306)
168 3cu5_A Two component transcrip 20.2 1.5E+02 0.0053 19.9 4.7 30 114-143 48-84 (141)
169 2x5n_A SPRPN10, 26S proteasome 20.1 1.7E+02 0.0058 21.8 5.1 34 16-49 110-143 (192)
170 2qjw_A Uncharacterized protein 20.1 1.5E+02 0.005 20.5 4.7 37 12-48 3-40 (176)
171 3eod_A Protein HNR; response r 20.0 1.9E+02 0.0065 18.8 5.1 44 101-146 39-89 (130)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2e-41 Score=301.75 Aligned_cols=223 Identities=18% Similarity=0.236 Sum_probs=169.3
Q ss_pred hhhcCCCceEEEEeCCCccChHHHHHHHHHHHhCC--CEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCCc
Q 026707 7 KAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKG--LKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQT 84 (234)
Q Consensus 7 ~~~~~~~~hv~~~p~p~~GH~~P~l~La~~La~~G--~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 84 (234)
+|.+.+++||+++|||+|||++||++|||+|+++| ++|||++|+.+..++.+......++|+|+.+|+++ |++.+..
T Consensus 7 ~M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdgl-p~~~~~~ 85 (454)
T 3hbf_A 7 EMNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGL-PKGYVSS 85 (454)
T ss_dssp -----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCC-CTTCCCC
T ss_pred cccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCC-CCCcccc
Confidence 57677789999999999999999999999999999 99999999988777654211123579999999998 5554443
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHhhhC-CCCCccEEEeCCCCccHHHHHHHcCCCceEecccchHHHHHHHHhhc--CCC
Q 026707 85 EGVEAYLERFWQIGPRSLCELVENMNG-SGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVNK--GLL 161 (234)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~l~~-~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~--~~~ 161 (234)
.+....+..+.+.+.+.+++.++++.+ .+.+++|||+|+|++|+.++|+++|||++.||+++++++++++|+.. ...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 86 GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 343333444444445567777766532 23579999999999999999999999999999999999999988642 111
Q ss_pred C--CCCCCccc-cCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHhhcccCCCEEEEcChhHhhHHHHHhhhc
Q 026707 162 K--LPLLDSQL-LLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKELNGWVNI 232 (234)
Q Consensus 162 ~--~~~~~~~~-~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNTf~eLE~~~~~~l~~ 232 (234)
. ....+..+ .+||+|+++.+|||+++.. +..+.+++++.+ ..+...++++|++|||+|||++++++++.
T Consensus 166 ~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~-~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 166 GSKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHK-MGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp CHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHH-HHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred CCCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHH-HHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 1 00112345 4999999999999988764 334456777777 88889999999999999999999998874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.1e-32 Score=247.83 Aligned_cols=221 Identities=24% Similarity=0.455 Sum_probs=160.2
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCC---C-CCCceEEeccCCCCCCC--CCCc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSS---P-STSISLEAISDGYDEGG--SAQT 84 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~---~-~~~i~~~~l~~~~~~~~--~~~~ 84 (234)
+++.||+++|+|++||++||++||++|++|||+|||++++.+..++.+.... . .++|+|+.+++++++.+ ....
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 3467999999999999999999999999999999999999887665431000 0 14799999998773311 1112
Q ss_pred cCHHHHHHHHHHhCcHHHHHHHHhhhCC--CCCccEEEeCCCCccHHHHHHHcCCCceEecccchHHHHHHHHhh----c
Q 026707 85 EGVEAYLERFWQIGPRSLCELVENMNGS--GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVN----K 158 (234)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~----~ 158 (234)
.+...++..+...+.+.++++++++..+ +.++||||+|.++.|+..+|+++|||++.||+++++.++.++++. .
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3444455555445678889999887532 257999999999999999999999999999999998887765542 3
Q ss_pred CCCCCCCC--------Cccc-cCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHhhcccCCCEEEEcChhHhhHHHHHh
Q 026707 159 GLLKLPLL--------DSQL-LLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKELNGW 229 (234)
Q Consensus 159 ~~~~~~~~--------~~~~-~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNTf~eLE~~~~~~ 229 (234)
+..+.... +..+ .+||+++++.+++|.++...+..+.+.+++.+ ..+...+++++|+|||++||++++++
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIE-VADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHH-HHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHH-HHHhhccCCEEEEcChHHHhHHHHHH
Confidence 44432211 1223 47999999999999776543323345555555 66778889999999999999999988
Q ss_pred hhc
Q 026707 230 VNI 232 (234)
Q Consensus 230 l~~ 232 (234)
++.
T Consensus 245 ~~~ 247 (482)
T 2pq6_A 245 LSS 247 (482)
T ss_dssp HHT
T ss_pred HHH
Confidence 875
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.97 E-value=3.7e-31 Score=236.36 Aligned_cols=220 Identities=25% Similarity=0.306 Sum_probs=151.8
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCC--CEEEEEeCcccccccccCCCC-CCCCceEEeccCCCCCCCCCCccCH
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKG--LKVTLVTTYFISKSLHRDSSS-PSTSISLEAISDGYDEGGSAQTEGV 87 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G--~~VT~vt~~~~~~~~~~~~~~-~~~~i~~~~l~~~~~~~~~~~~~~~ 87 (234)
.++.||+++|+|++||++||++||++|++|| +.|||++|+.+..++.+...+ ...+|+++.+++++ +++.+...+.
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~gl-p~~~~~~~~~ 83 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGV-PEGYVFAGRP 83 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCC-CTTCCCCCCT
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCC-CCcccccCCh
Confidence 3467999999999999999999999999985 667999998665554331101 12579999999887 4433221122
Q ss_pred HHHHHHHHHhCcHHHHHHHHhhhCC-CCCccEEEeCCCCccHHHHHHHcCCCceEecccchHHHHHHHHhh----c-CCC
Q 026707 88 EAYLERFWQIGPRSLCELVENMNGS-GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVN----K-GLL 161 (234)
Q Consensus 88 ~~~~~~~~~~~~~~l~~ll~~l~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~----~-~~~ 161 (234)
...+..+.+.+.+.++++++++.++ +.++||||+|.++.|+.++|+++|||++.||+++++.++.+++.. . +..
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 2223333333345566666654321 257999999999999999999999999999999998887766542 1 321
Q ss_pred CC-CCCCccc-cCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHhhcccCCCEEEEcChhHhhHHHHHhhhc
Q 026707 162 KL-PLLDSQL-LLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKELNGWVNI 232 (234)
Q Consensus 162 ~~-~~~~~~~-~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNTf~eLE~~~~~~l~~ 232 (234)
+. ...+..+ .+||+++++.+|+|..+........+.+++.+ ..+..++++++++|||+|||+.++++++.
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vl~ns~~~le~~~~~~~~~ 235 (456)
T 2c1x_A 164 GIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHR-MGQVLPKATAVFINSFEELDDSLTNDLKS 235 (456)
T ss_dssp CCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHH-HHHHGGGSSCEEESSCGGGCHHHHHHHHH
T ss_pred ccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHH-HHHhhhhCCEEEECChHHHhHHHHHHHHh
Confidence 11 1112233 58999999999999755432222344555555 55667889999999999999999888764
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.97 E-value=1.6e-30 Score=232.56 Aligned_cols=212 Identities=18% Similarity=0.212 Sum_probs=155.1
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhC--CCEEEEEeCcccccc-----cccCCCCCCCCceEEeccCCCCCCCCCCc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKS-----LHRDSSSPSTSISLEAISDGYDEGGSAQT 84 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~--G~~VT~vt~~~~~~~-----~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 84 (234)
++.||+++|+|++||++||++||++|++| ||+|||++|+.+... +.+. .....+|+|+.+|++..++ .+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~-~~~~~~i~~~~lp~~~~~~-~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV-LASQPQIQLIDLPEVEPPP-QELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHH-HCSCTTEEEEECCCCCCCC-GGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhc-ccCCCCceEEECCCCCCCc-cccc
Confidence 45799999999999999999999999999 999999999876421 1110 0122579999998752132 1111
Q ss_pred cCHHH-HHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccchHHHHHHHHhhcCCCC-
Q 026707 85 EGVEA-YLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVNKGLLK- 162 (234)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~~~~~- 162 (234)
.+... +...+ ..+...++++++++ . ..++||||+|.++.|+.++|+++|||+++||+++++.+++++++......
T Consensus 86 ~~~~~~~~~~~-~~~~~~~~~ll~~~-~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (463)
T 2acv_A 86 KSPEFYILTFL-ESLIPHVKATIKTI-L-SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEE 162 (463)
T ss_dssp GSHHHHHHHHH-HHTHHHHHHHHHHH-C-CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTC
T ss_pred CCccHHHHHHH-HhhhHHHHHHHHhc-c-CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccC
Confidence 12211 22222 34567888888876 2 35799999999999999999999999999999999999888887542211
Q ss_pred -CCCCCc---cccCCCC-CCCCCCCCCCCccCCCCchHHHHHHHHHHhhcccCCCEEEEcChhHhhHHHHHhhhc
Q 026707 163 -LPLLDS---QLLLPGM-PPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKELNGWVNI 232 (234)
Q Consensus 163 -~~~~~~---~~~iPg~-p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNTf~eLE~~~~~~l~~ 232 (234)
..+.+. ...+||+ ++++.+|+|..+.+. ..+++.+.+ ..+..++++++++|||+|||+.+++++++
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~~-~~~~~~~~~~~l~nt~~ele~~~~~~l~~ 233 (463)
T 2acv_A 163 VFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYYK-LAERFRDTKGIIVNTFSDLEQSSIDALYD 233 (463)
T ss_dssp CCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHHH-HHHHHTTSSEEEESCCHHHHHHHHHHHHH
T ss_pred CCCCccccCceeECCCCCCCCChHHCchhhcCC---chHHHHHHH-HHHhcccCCEEEECCHHHHhHHHHHHHHh
Confidence 111122 4568999 899999998655433 124555566 67778899999999999999999988764
No 5
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.97 E-value=4.9e-30 Score=230.44 Aligned_cols=217 Identities=25% Similarity=0.289 Sum_probs=153.5
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhC-CCEEEEEeCccc--ccccccCCCCCCCCceEEeccCCCCCCCCCCccCH
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTYFI--SKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGV 87 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~-G~~VT~vt~~~~--~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~ 87 (234)
+++.||+++|+|++||++||++||++|++| ||+|||+++..+ ...+.+.......+|+|+.++++..++ .....+.
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~~~~~ 82 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTD-LSSSTRI 82 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTT-SCTTCCH
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCC-CCCchhH
Confidence 456799999999999999999999999998 999999999874 222221000012579999998642121 1111233
Q ss_pred HHHHHHHHHhCcHHHHHHHHhhhCCCCCc-cEEEeCCCCccHHHHHHHcCCCceEecccchHHHHHHHHhhc----CCCC
Q 026707 88 EAYLERFWQIGPRSLCELVENMNGSGVPV-DCIVYDSFLPWALDVAKKFGLVGAAFLTQSCVVDCIYYHVNK----GLLK 162 (234)
Q Consensus 88 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~~-d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a~~~~~~~~~~~----~~~~ 162 (234)
...+......+.+.++++++++.. ..++ ||||+|.++.|+.++|+++|||++.||+++++.+++++|++. +..+
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 222222233456778888887632 2467 999999999999999999999999999999998888877642 2111
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCccCCCCchHHHHHHHHHHhhcccCCCEEEEcChhHhhHHHHHhhhc
Q 026707 163 LPLLDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEKELNGWVNI 232 (234)
Q Consensus 163 ~~~~~~~~~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ilvNTf~eLE~~~~~~l~~ 232 (234)
..+.+..+.+||+++++.+++|..+.... ..+++.+.+ ..+..++++|+++|||+|||+.++.++++
T Consensus 162 ~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~--~~~~~~~~~-~~~~~~~~~g~~~nt~~ele~~~~~~l~~ 228 (480)
T 2vch_A 162 FRELTEPLMLPGCVPVAGKDFLDPAQDRK--DDAYKWLLH-NTKRYKEAEGILVNTFFELEPNAIKALQE 228 (480)
T ss_dssp GGGCSSCBCCTTCCCBCGGGSCGGGSCTT--SHHHHHHHH-HHHHGGGCSEEEESCCTTTSHHHHHHHHS
T ss_pred ccccCCcccCCCCCCCChHHCchhhhcCC--chHHHHHHH-HHHhcccCCEEEEcCHHHHhHHHHHHHHh
Confidence 11112245689999999999997664432 234555555 66778889999999999999999988764
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.77 E-value=2.6e-18 Score=151.06 Aligned_cols=134 Identities=21% Similarity=0.215 Sum_probs=92.2
Q ss_pred hHhhhcCCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCC-
Q 026707 5 EKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQ- 83 (234)
Q Consensus 5 ~~~~~~~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~- 83 (234)
|.+..++++.||+++|+|++||++|++.||++|+++||+|||++++...+.+.+ .+++++.+++++ +.+...
T Consensus 4 ~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~------~g~~~~~~~~~~-~~~~~~~ 76 (424)
T 2iya_A 4 EHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA------AGATPVVYDSIL-PKESNPE 76 (424)
T ss_dssp -------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------HTCEEEECCCCS-CCTTCTT
T ss_pred ccccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh------CCCEEEecCccc-cccccch
Confidence 445555667899999999999999999999999999999999999887665543 367888887655 222111
Q ss_pred ---ccCHHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccch
Q 026707 84 ---TEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSC 147 (234)
Q Consensus 84 ---~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a 147 (234)
..+....+..+.......++++.+.+ ++ .+|||||+|.++.|+..+|+++|||++.+++.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~-~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 77 ESWPEDQESAMGLFLDEAVRVLPQLEDAY-AD-DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHT-TT-SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHH-hc-cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 12333333333222222233333322 22 5789999999989999999999999999998764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.60 E-value=4.1e-15 Score=129.13 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=81.1
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCC------CCCCCCc--
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYD------EGGSAQT-- 84 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~------~~~~~~~-- 84 (234)
..||+|+|+|++||++|++.||++|+++||+|||+|++....... .++.++.+.++.. +......
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-------AGLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-------TTCEEEESSTTCCSHHHHSCCC------
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-------cCCeeEecCCchhHhhhccccccccccc
Confidence 458999999999999999999999999999999999986654332 2455555532211 1000000
Q ss_pred -----cCHHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccch
Q 026707 85 -----EGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSC 147 (234)
Q Consensus 85 -----~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~a 147 (234)
.....+...+.......+.++++.+.. .+||+||+|.+..|+..+|+++|||++.++....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~ 160 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA 160 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence 001111111221112223333332221 3689999999999999999999999999876654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.59 E-value=1.8e-15 Score=132.74 Aligned_cols=122 Identities=13% Similarity=0.186 Sum_probs=82.7
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCC-ccCHHHHHHH
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQ-TEGVEAYLER 93 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~-~~~~~~~~~~ 93 (234)
||+++|++++||++|++.||++|+++||+|||++++...+.+.. .+++++.++... .+.... .......+..
T Consensus 2 ~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~------~g~~~~~i~~~~-~~~~~~~~~~~~~~~~~ 74 (415)
T 1iir_A 2 RVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE------VGVPHVPVGPSA-RAPIQRAKPLTAEDVRR 74 (415)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCCEEECCC--------CCSCCCHHHHHH
T ss_pred eEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH------cCCeeeeCCCCH-HHHhhcccccchHHHHH
Confidence 89999999999999999999999999999999999886555543 468888887542 111111 1111111111
Q ss_pred HHHhCcHHHHHHHHhhhCCCCCccEEEeCC-CCcc--HHHHHHHcCCCceEecccc
Q 026707 94 FWQIGPRSLCELVENMNGSGVPVDCIVYDS-FLPW--ALDVAKKFGLVGAAFLTQS 146 (234)
Q Consensus 94 ~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~-~~~~--~~~vA~~lgiP~v~f~~~~ 146 (234)
+ +...+++.++++.....+|||||+|. +..| +..+|+++|||++.+++++
T Consensus 75 ~---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 75 F---TTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp H---HHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred H---HHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 1 11122333443321125799999998 6678 8999999999999998876
No 9
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.51 E-value=6.9e-14 Score=121.24 Aligned_cols=125 Identities=19% Similarity=0.271 Sum_probs=86.1
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCC-CCC--CCccCHH
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDE-GGS--AQTEGVE 88 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~--~~~~~~~ 88 (234)
.+.||+++++++.||++|++.|+++|+++||+|+|++++...+.+.. .+++++.++..++. .+. ....+..
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA------AGAEVVLYKSEFDTFHVPEVVKQEDAE 76 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH------TTCEEEECCCGGGTSSSSSSSCCTTHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH------cCCEEEecccccccccccccccccchH
Confidence 35699999999999999999999999999999999999877666643 46788887643211 010 0112222
Q ss_pred HHHHH-HHHhCcHHHHHHHHhhhCCCCCccEEEeC-CCCccHHHHHHHcCCCceEecc
Q 026707 89 AYLER-FWQIGPRSLCELVENMNGSGVPVDCIVYD-SFLPWALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 89 ~~~~~-~~~~~~~~l~~ll~~l~~~~~~~d~vI~D-~~~~~~~~vA~~lgiP~v~f~~ 144 (234)
..+.. +.......+.++.+.+. + .+||+||+| .+..|+..+|+++|||++.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~-~-~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~ 132 (402)
T 3ia7_A 77 TQLHLVYVRENVAILRAAEEALG-D-NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTG 132 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-T-CCCSEEEEESTTHHHHHHHHHHHTCCEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-c-cCCCEEEECchHHHHHHHHHHhhCCCEEEEec
Confidence 22222 22222223344444332 2 578999999 7778899999999999999864
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.50 E-value=1.3e-13 Score=121.13 Aligned_cols=125 Identities=19% Similarity=0.224 Sum_probs=86.5
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCC----ccCHH
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQ----TEGVE 88 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~----~~~~~ 88 (234)
+.||+++++++.||++|++.|+++|+++||+||++++....+.+.. .+++++.++... +.+... ..+..
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~------~g~~~~~~~~~~-~~~~~~~~~~~~~~~ 79 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA------TGPRPVLYHSTL-PGPDADPEAWGSTLL 79 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT------TSCEEEECCCCS-CCTTSCGGGGCSSHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh------CCCEEEEcCCcC-ccccccccccchhhH
Confidence 4699999999999999999999999999999999999876555543 467888887543 212111 12332
Q ss_pred HHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccc
Q 026707 89 AYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (234)
Q Consensus 89 ~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (234)
..+..+...+...+.++.+.+ ++ .+||+||+|.+..|+..+|+++|||++.+++..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~l-~~-~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~ 135 (430)
T 2iyf_A 80 DNVEPFLNDAIQALPQLADAY-AD-DIPDLVLHDITSYPARVLARRWGVPAVSLSPNL 135 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT-SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hc-cCCCEEEECCccHHHHHHHHHcCCCEEEEeccc
Confidence 222222221122233333333 22 578999999987889999999999999998655
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.45 E-value=6.7e-14 Score=122.71 Aligned_cols=121 Identities=12% Similarity=0.025 Sum_probs=81.0
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCC--CccCHH-HHH
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSA--QTEGVE-AYL 91 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~--~~~~~~-~~~ 91 (234)
||+++++++.||++|++.||++|+++||+|||++++...+.+.. .+++++.++... .+... ...... .+.
T Consensus 2 rIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~------~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 74 (416)
T 1rrv_A 2 RVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE------VGVPHVPVGLPQ-HMMLQEGMPPPPPEEEQ 74 (416)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------HTCCEEECSCCG-GGCCCTTSCCCCHHHHH
T ss_pred eEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH------cCCeeeecCCCH-HHHHhhccccchhHHHH
Confidence 89999999999999999999999999999999999876554543 367888876432 11110 001111 111
Q ss_pred HHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCC-Ccc--HHHHHHHcCCCceEecccc
Q 026707 92 ERFWQIGPRSLCELVENMNGSGVPVDCIVYDSF-LPW--ALDVAKKFGLVGAAFLTQS 146 (234)
Q Consensus 92 ~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~-~~~--~~~vA~~lgiP~v~f~~~~ 146 (234)
..+. ..+.++++.+.....+|||||+|.+ ..| +..+|+++|||++.+++++
T Consensus 75 ~~~~----~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 75 RLAA----MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp HHHH----HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred HHHH----HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 1111 1223333333211147899999974 456 7899999999999987765
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.44 E-value=2.4e-13 Score=118.77 Aligned_cols=126 Identities=14% Similarity=0.180 Sum_probs=85.7
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCC---CccCHH
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSA---QTEGVE 88 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~---~~~~~~ 88 (234)
++.||+++++++.||++|++.|+++|.++||+|+|++++...+.+.. .+++++.++..++..... ...+..
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA------AGATVVPYQSEIIDADAAEVFGSDDLG 92 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCEEEECCCSTTTCCHHHHHHSSSSC
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh------cCCEEEeccccccccccchhhccccHH
Confidence 45799999999999999999999999999999999998877766654 468888887544211000 000110
Q ss_pred HHHHH-HHHhCcHHHHHHHHhhhCCCCCccEEEeC-CCCccHHHHHHHcCCCceEeccc
Q 026707 89 AYLER-FWQIGPRSLCELVENMNGSGVPVDCIVYD-SFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 89 ~~~~~-~~~~~~~~l~~ll~~l~~~~~~~d~vI~D-~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
..+.. +.......++++.+.+. + .+||+||+| .+..|+..+|+++|||++.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~l~-~-~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~ 149 (415)
T 3rsc_A 93 VRPHLMYLRENVSVLRATAEALD-G-DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAA 149 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-S-SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-c-cCCCEEEECchhhhHHHHHHHHhCCCEEEEEec
Confidence 11111 22211223334443332 2 578999999 77788899999999999998743
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.31 E-value=8.9e-12 Score=107.70 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=80.2
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCC-----------CCCCCC
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYD-----------EGGSAQ 83 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-----------~~~~~~ 83 (234)
||++++.++.||++|++.|+++|+++||+|+++++....+.+.. .+++++.++.... ++....
T Consensus 2 rIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (384)
T 2p6p_A 2 RILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG------VGLPAVATTDLPIRHFITTDREGRPEAIPS 75 (384)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCCEEESCSSCHHHHHHBCTTSCBCCCCC
T ss_pred EEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh------CCCEEEEeCCcchHHHHhhhcccCccccCc
Confidence 79999999999999999999999999999999998865544432 3567777653210 000000
Q ss_pred ccCHHHHH-HH-HHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccc
Q 026707 84 TEGVEAYL-ER-FWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (234)
Q Consensus 84 ~~~~~~~~-~~-~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (234)
.......+ .. +.......++++.+.+.+ .+||+||+|.+..|+..+|+++|||++.++..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 76 DPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 00111111 11 111111223333332221 368999999988888999999999999987543
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.30 E-value=6.6e-12 Score=110.86 Aligned_cols=128 Identities=13% Similarity=0.097 Sum_probs=85.6
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCC----------
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGG---------- 80 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~---------- 80 (234)
....||+++++++.||++|++.|+++|.++||+|+|++++...+.+.. .+++++.++...+..+
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~------~G~~~~~i~~~~~~~~~~~~~~~~~~ 91 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA------AGLTAVPVGTDVDLVDFMTHAGHDII 91 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT------TTCCEEECSCCCCHHHHHHHTTHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh------CCCceeecCCccchHHHhhhhhcccc
Confidence 345699999999999999999999999999999999999876554543 4688888764321000
Q ss_pred -----CCC----cc--CHH---HHHHHHHHh----C-cH-HHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCce
Q 026707 81 -----SAQ----TE--GVE---AYLERFWQI----G-PR-SLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGA 140 (234)
Q Consensus 81 -----~~~----~~--~~~---~~~~~~~~~----~-~~-~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v 140 (234)
... .. ... .....+... . .. .++++++.+.+ .+||+||+|.+..|+..+|+++|||++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 92 DYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCCCEE
Confidence 000 00 111 111112111 1 12 45555543321 368999999988888999999999999
Q ss_pred Eecccc
Q 026707 141 AFLTQS 146 (234)
Q Consensus 141 ~f~~~~ 146 (234)
.+....
T Consensus 170 ~~~~~~ 175 (441)
T 2yjn_A 170 RLLWGP 175 (441)
T ss_dssp EECSSC
T ss_pred EEecCC
Confidence 986554
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.25 E-value=4.3e-11 Score=104.01 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=81.8
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCC--------------
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDE-------------- 78 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-------------- 78 (234)
..||+++..++.||++|++.|+++|.++||+|+++++ ...+.+.. .+++++.++.....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA------AGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT------TTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh------CCCeeEecCCccCHHHHhhhcccCCccc
Confidence 3599999999999999999999999999999999998 55444433 46788877632100
Q ss_pred ------CCCCCccCHHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEeccc
Q 026707 79 ------GGSAQTEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 79 ------~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
............+......+...+.+++++ .+||+||+|....++..+|+.+|||++.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD-----YRPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 000011111122222222223344444443 36899999987778889999999999987654
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.18 E-value=1.7e-11 Score=107.20 Aligned_cols=120 Identities=15% Similarity=0.205 Sum_probs=78.4
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCC-CC--CCccCHHHHH
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEG-GS--AQTEGVEAYL 91 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~--~~~~~~~~~~ 91 (234)
||+++++++.||++|++.|+++|.++||+|+|+++....+.+.. .++++..++...... +. .........
T Consensus 2 rIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~------~g~~~~~l~~~~~~~~~~~~~~~~~~~~~- 74 (404)
T 3h4t_A 2 GVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE------VGVPMVPVGRAVRAGAREPGELPPGAAEV- 74 (404)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH------TTCCEEECSSCSSGGGSCTTCCCTTCGGG-
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH------cCCceeecCCCHHHHhccccCCHHHHHHH-
Confidence 78999999999999999999999999999999999876655543 367787775322100 00 000011111
Q ss_pred HHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccH---HHHHHHcCCCceEecccch
Q 026707 92 ERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWA---LDVAKKFGLVGAAFLTQSC 147 (234)
Q Consensus 92 ~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~---~~vA~~lgiP~v~f~~~~a 147 (234)
+.......++++.+.. .++|+||+|....++ ..+|+++|||++..+.++.
T Consensus 75 --~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 75 --VTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp --HHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred --HHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 1111112233333222 258999999765544 7899999999998776654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.16 E-value=8.4e-11 Score=102.10 Aligned_cols=128 Identities=13% Similarity=0.127 Sum_probs=80.3
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCC--------CCCCC
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYD--------EGGSA 82 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~--------~~~~~ 82 (234)
..+.||++++.++.||++|++.|+++|.++||+|++++++...+.+.. .++.++.++.... ..+..
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~------~G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG------AGLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH------TTCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh------CCCeeEecCCccchHhhhhhhccCcc
Confidence 345699999999999999999999999999999999998766555543 3566666642110 00000
Q ss_pred --CccCHH----HHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccc
Q 026707 83 --QTEGVE----AYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (234)
Q Consensus 83 --~~~~~~----~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (234)
...... .....+.......++++.+.+.+ .+||+||+|....++..+|+.+|||++.+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCC
Confidence 000111 11111111111222233222211 368999999877888899999999999876543
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.12 E-value=1.8e-10 Score=99.63 Aligned_cols=122 Identities=13% Similarity=0.093 Sum_probs=76.9
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEec-cCCCC---------C-CCCC
Q 026707 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAI-SDGYD---------E-GGSA 82 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l-~~~~~---------~-~~~~ 82 (234)
.||+++..++.||++|++.|+++|.++||+|+++++....+.+.. .+++++.+ ..... + ....
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG------AGLTTAGIRGNDRTGDTGGTTQLRFPNPA 75 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH------BTCEEEEC--------------CCSCCGG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh------CCCceeeecCCccchhhhhhhcccccccc
Confidence 489999999999999999999999999999999998765554433 35666665 21110 0 0000
Q ss_pred -C-c--cCHHHHHHHHHHhC-------cHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccc
Q 026707 83 -Q-T--EGVEAYLERFWQIG-------PRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (234)
Q Consensus 83 -~-~--~~~~~~~~~~~~~~-------~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (234)
. . ......+......+ ...+.+++++ .+||+||+|.+..++..+|+.+|||++.+....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 76 FGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-----WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp GGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred cccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-----cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 0 0 01111111111111 1223333333 368999999877777889999999999985443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.98 E-value=1.5e-09 Score=94.22 Aligned_cols=124 Identities=21% Similarity=0.139 Sum_probs=80.2
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCC------------CCC
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDG------------YDE 78 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~------------~~~ 78 (234)
..+.||+++..++.||++|++.|+++|.++||+|+++++....+.+.. .++++..++.. ...
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK------LGFEPVATGMPVFDGFLAALRIRFDT 91 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH------TTCEEEECCCCHHHHHHHHHHHHHSC
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh------cCCceeecCcccccchhhhhhhhhcc
Confidence 345799999999999999999999999999999999999765443432 36777777531 000
Q ss_pred CCCCC------ccCHHHHHHHH-HHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEeccc
Q 026707 79 GGSAQ------TEGVEAYLERF-WQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 79 ~~~~~------~~~~~~~~~~~-~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
.+... .......+... .......+.+++++ .+||+||+|.+..++..+|+++|||.+.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~ 160 (412)
T 3otg_A 92 DSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-----LRPDLVVQEISNYGAGLAALKAGIPTICHGVG 160 (412)
T ss_dssp SCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred cCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-----cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence 00000 01111111111 11111233444443 36899999987777788999999999987554
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.54 E-value=5.3e-07 Score=77.69 Aligned_cols=116 Identities=18% Similarity=0.151 Sum_probs=67.3
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccc-ccccCCCCCCCCceEEeccC-CCCCCCCCCccCHHHH
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK-SLHRDSSSPSTSISLEAISD-GYDEGGSAQTEGVEAY 90 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~-~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~ 90 (234)
+.+|++..-..-||++|.+.||++|.++||+|+|+++....+ ++.. ..++.++.++- ++. +......+...
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~-----~~g~~~~~i~~~~~~--~~~~~~~~~~~ 74 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVP-----KAGLPLHLIQVSGLR--GKGLKSLVKAP 74 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTG-----GGTCCEEECC----------------CH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhh-----hcCCcEEEEECCCcC--CCCHHHHHHHH
Confidence 357887665555999999999999999999999999864322 2211 13567777752 221 10011111111
Q ss_pred HHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCccH--HHHHHHcCCCceEe
Q 026707 91 LERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPWA--LDVAKKFGLVGAAF 142 (234)
Q Consensus 91 ~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~--~~vA~~lgiP~v~f 142 (234)
+..+.. ......++++ .+||+||++...... ...|+.+|||.+..
T Consensus 75 ~~~~~~--~~~~~~~l~~-----~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 75 LELLKS--LFQALRVIRQ-----LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHH--HHHHHHHHHH-----HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHH--HHHHHHHHHh-----cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 111111 1123345554 368999999765433 45678899999975
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=97.78 E-value=0.00013 Score=61.78 Aligned_cols=112 Identities=20% Similarity=0.171 Sum_probs=69.0
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccc--ccccCCCCCCCCceEEeccC-CCCCCCCCCccCHHHH
Q 026707 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK--SLHRDSSSPSTSISLEAISD-GYDEGGSAQTEGVEAY 90 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~--~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~ 90 (234)
.+|+++.....||..++..|++.|+++||+|++++...... .+.. .++++..++. ++ .. ......
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~------~g~~~~~~~~~~~-~~-----~~~~~~ 74 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK------HGIEIDFIRISGL-RG-----KGIKAL 74 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG------GTCEEEECCCCCC-TT-----CCHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc------cCCceEEecCCcc-Cc-----CccHHH
Confidence 68999887666999999999999999999999999865321 1211 3567766642 11 11 011111
Q ss_pred ----HHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCc--cHHHHHHHcCCCceEecc
Q 026707 91 ----LERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 91 ----~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~--~~~~vA~~lgiP~v~f~~ 144 (234)
...+. ....+.+++++ .+||+|+++.... ++..+++.+|+|.+....
T Consensus 75 ~~~~~~~~~--~~~~l~~~l~~-----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 75 IAAPLRIFN--AWRQARAIMKA-----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp HTCHHHHHH--HHHHHHHHHHH-----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHH--HHHHHHHHHHh-----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 11111 01223344443 3689999986442 345677888999986543
No 22
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.33 E-value=0.065 Score=45.75 Aligned_cols=129 Identities=14% Similarity=0.127 Sum_probs=66.7
Q ss_pred CceEEEEeC---C-C-ccChHHHHHHHHHHHhCCCEEEEEeCcccccccc---------c-----CCCCCCCCceEEecc
Q 026707 13 RVHCLVLSY---P-A-QGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLH---------R-----DSSSPSTSISLEAIS 73 (234)
Q Consensus 13 ~~hv~~~p~---p-~-~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~---------~-----~~~~~~~~i~~~~l~ 73 (234)
+.+|+++.. | . -|--.-+..|++.|+++||+|+++++......-. . .......++++..++
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 81 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG 81 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEec
Confidence 457887762 2 2 3555668999999999999999999653321100 0 000011356666654
Q ss_pred CCC-CCCCCCCccCHH-HHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHHcCCCceEecc
Q 026707 74 DGY-DEGGSAQTEGVE-AYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 74 ~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~f~~ 144 (234)
... ...+ ...... .+...+.. ....+..+++.+.....+||+|.+...... +..+++..|+|.+...-
T Consensus 82 ~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h 153 (439)
T 3fro_A 82 GGLLDSED--VYGPGWDGLIRKAVT-FGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIH 153 (439)
T ss_dssp SGGGGCSS--TTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEES
T ss_pred chhccccc--cccCCcchhhhhhHH-HHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEec
Confidence 311 0000 001011 11111111 122344455544222257899987654432 34566778999887543
No 23
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=95.45 E-value=0.055 Score=46.51 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=65.5
Q ss_pred cCCCceEEEEeC---C--------CccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCC
Q 026707 10 SCKRVHCLVLSY---P--------AQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDE 78 (234)
Q Consensus 10 ~~~~~hv~~~p~---p--------~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~ 78 (234)
.+++.+|+++.. | ..|+-..+..|++.|+++||+|++++.......... .....+++++.++... .
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~v~v~~~~~~~-~ 93 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEI--VRVAENLRVINIAAGP-Y 93 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE--EEEETTEEEEEECCSC-S
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc--ccccCCeEEEEecCCC-c
Confidence 345568998874 3 248889999999999999999999987643211000 0011467777665321 1
Q ss_pred CCCCCccCHHHHHHHHHHhCcHHHHHH-HHhhhCCCCCccEEEeCCCCc-c-HHHHHHHcCCCceEeccc
Q 026707 79 GGSAQTEGVEAYLERFWQIGPRSLCEL-VENMNGSGVPVDCIVYDSFLP-W-ALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l-l~~l~~~~~~~d~vI~D~~~~-~-~~~vA~~lgiP~v~f~~~ 145 (234)
.... .......+..+.. .+... ++. . .+||+|++..+.. + +..+++.+|+|.+...-.
T Consensus 94 ~~~~-~~~~~~~~~~~~~----~~~~~~~~~---~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 94 EGLS-KEELPTQLAAFTG----GMLSFTRRE---K-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp SSCC-GGGGGGGHHHHHH----HHHHHHHHH---T-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred cccc-hhHHHHHHHHHHH----HHHHHHHhc---c-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 1111 1111111111111 11111 222 1 2489998875332 2 235677789998875443
No 24
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=94.20 E-value=0.23 Score=43.61 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=65.7
Q ss_pred CceEEEEeC---C------------CccChHHHHHHHHHHHhCCCEEEEEeCcccccc-------cccCCCCCCCCceEE
Q 026707 13 RVHCLVLSY---P------------AQGHINPLLQFAKRLEHKGLKVTLVTTYFISKS-------LHRDSSSPSTSISLE 70 (234)
Q Consensus 13 ~~hv~~~p~---p------------~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~-------~~~~~~~~~~~i~~~ 70 (234)
+.+|+++.. | ..|.-.-+..|++.|+++||+|++++....... ... -....+++++
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~--~~~~~gv~v~ 84 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDY--YQETNKVRIV 84 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEE--CTTCSSEEEE
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHh--ccCCCCeEEE
Confidence 468998763 2 247778899999999999999999987543211 110 0002467777
Q ss_pred eccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCC-cc-HHHHHHHcCCCceEecc
Q 026707 71 AISDGYDEGGSAQTEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFL-PW-ALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 71 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~-~~-~~~vA~~lgiP~v~f~~ 144 (234)
.++..- .... ...........+ ...+..++++. ..++|+|.+.... .+ +..+++.+|+|.+...-
T Consensus 85 ~~~~~~-~~~~-~~~~~~~~~~~~----~~~l~~~l~~~---~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H 151 (499)
T 2r60_A 85 RIPFGG-DKFL-PKEELWPYLHEY----VNKIINFYREE---GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGH 151 (499)
T ss_dssp EECCSC-SSCC-CGGGCGGGHHHH----HHHHHHHHHHH---TCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECS
T ss_pred EecCCC-cCCc-CHHHHHHHHHHH----HHHHHHHHHhc---CCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEcc
Confidence 776321 1000 000110111111 11233444432 1368999876532 22 23567778999886543
No 25
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=93.42 E-value=0.76 Score=38.69 Aligned_cols=113 Identities=14% Similarity=0.159 Sum_probs=61.5
Q ss_pred CceEEEEeCCCc-cChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCCccCHHHHH
Q 026707 13 RVHCLVLSYPAQ-GHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGVEAYL 91 (234)
Q Consensus 13 ~~hv~~~p~p~~-GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~ 91 (234)
++.+....+|.. |.-.-...|++.|+++||+|++++...... .. ....++.+..++..-.+ .... ... ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~----~~~~~i~~~~~~~~~~~-~~~~-~~~--~~ 85 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN----KVYPNIYFHEVTVNQYS-VFQY-PPY--DL 85 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------CCCTTEEEECCCCC-----CCS-CCH--HH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc----ccCCceEEEeccccccc-cccc-ccc--cH
Confidence 466777777765 677888999999999999999998854321 11 11245666655321000 0000 000 01
Q ss_pred HHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCc--cHHHHHHHc---CCCceEecc
Q 026707 92 ERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKF---GLVGAAFLT 144 (234)
Q Consensus 92 ~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~--~~~~vA~~l---giP~v~f~~ 144 (234)
.. ...+.+++++ .+||+|++..... +...+++++ ++|.+...-
T Consensus 86 ~~-----~~~l~~~l~~-----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h 133 (394)
T 2jjm_A 86 AL-----ASKMAEVAQR-----ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLH 133 (394)
T ss_dssp HH-----HHHHHHHHHH-----HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECC
T ss_pred HH-----HHHHHHHHHH-----cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 00 1224444544 3589998875443 234455554 599877543
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=92.57 E-value=0.37 Score=40.31 Aligned_cols=110 Identities=12% Similarity=0.105 Sum_probs=64.4
Q ss_pred CCCceEEEEeC--C--CccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCCccC
Q 026707 11 CKRVHCLVLSY--P--AQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEG 86 (234)
Q Consensus 11 ~~~~hv~~~p~--p--~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 86 (234)
+++.+|+++.. + ..|.-.-+..|++.| +||+|++++........... ....++.+..++... . .. .
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~--~~---~ 71 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY--DKTLDYEVIRWPRSV-M--LP---T 71 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH--HTTCSSEEEEESSSS-C--CS---C
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh--ccccceEEEEccccc-c--cc---c
Confidence 34568887753 3 358888899999999 79999999987554311100 012356776665321 0 00 1
Q ss_pred HHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCC--ccHHHHHHHcCCCceEecc
Q 026707 87 VEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFL--PWALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~--~~~~~vA~~lgiP~v~f~~ 144 (234)
. .. ...+.+++++ .++|+|++.... .+....++++|+|.+++..
T Consensus 72 ~-~~--------~~~l~~~~~~-----~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~ 117 (394)
T 3okp_A 72 P-TT--------AHAMAEIIRE-----REIDNVWFGAAAPLALMAGTAKQAGASKVIAST 117 (394)
T ss_dssp H-HH--------HHHHHHHHHH-----TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEEC
T ss_pred h-hh--------HHHHHHHHHh-----cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEe
Confidence 1 00 1234444544 368999876544 3456778999999555443
No 27
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=86.97 E-value=7.6 Score=31.15 Aligned_cols=113 Identities=12% Similarity=0.111 Sum_probs=58.4
Q ss_pred ceEEEEeCCCccChHH-HHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCCccCHHHHHH
Q 026707 14 VHCLVLSYPAQGHINP-LLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGVEAYLE 92 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P-~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~ 92 (234)
+|||+.- --|--.| +..|++.|.+.| +|+++.+..+++-...+. .-...+++....... .......+.+-
T Consensus 2 p~ILlTN--DDGi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si-T~~~pl~~~~~~~~~---~~~v~GTPaDC-- 72 (251)
T 2wqk_A 2 PTFLLVN--DDGYFSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-TFTEPLKMRKIDTDF---YTVIDGTPADC-- 72 (251)
T ss_dssp CEEEEEC--SSCTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-CCSSCEEEEEEETTE---EEETTCCHHHH--
T ss_pred CEEEEEc--CCCCCcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc-CCCCCceeEEeeccc---eeecCCChHHH--
Confidence 4666655 3344445 667888888888 699888876665432210 011234554443210 00000112111
Q ss_pred HHHHhCcHHHHHHHHhhhCCCCCccEEEe----------CCCCccH---HHHHHHcCCCceEeccc
Q 026707 93 RFWQIGPRSLCELVENMNGSGVPVDCIVY----------DSFLPWA---LDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 93 ~~~~~~~~~l~~ll~~l~~~~~~~d~vI~----------D~~~~~~---~~vA~~lgiP~v~f~~~ 145 (234)
+.=.+..+... .+||+||+ |.+.+.+ +--|.-+|||.+.|+-.
T Consensus 73 ---------V~lal~~~l~~-~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 73 ---------VHLGYRVILEE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ---------HHHHHHTTTTT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ---------HhhhhhhhcCC-CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 11112222222 46899998 5555443 34555689999999853
No 28
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=85.24 E-value=1.9 Score=40.72 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=67.8
Q ss_pred chhHhhhcC-CCceEEEEeCCCc-------------cChHHHH--------HHHHHHHhCCCEEE----EEeCcccccc-
Q 026707 3 NIEKKAASC-KRVHCLVLSYPAQ-------------GHINPLL--------QFAKRLEHKGLKVT----LVTTYFISKS- 55 (234)
Q Consensus 3 ~~~~~~~~~-~~~hv~~~p~p~~-------------GH~~P~l--------~La~~La~~G~~VT----~vt~~~~~~~- 55 (234)
++|+-.... ...+|+++..-|. |...=.+ +||++|+++||+|| ++|-......
T Consensus 267 ~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g 346 (816)
T 3s28_A 267 TLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG 346 (816)
T ss_dssp HHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTT
T ss_pred cHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCC
Confidence 345433222 3468888876553 4455555 57888888999987 7765432210
Q ss_pred ------cccCCCCCCCCceEEeccCCCCCCC----CCCccCHHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCC
Q 026707 56 ------LHRDSSSPSTSISLEAISDGYDEGG----SAQTEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFL 125 (234)
Q Consensus 56 ------~~~~~~~~~~~i~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~ 125 (234)
... .....+++++.+|-+- ..+ .-....+..++..+. ...++.+++.. +.+||+|.+....
T Consensus 347 ~~y~~~~e~--i~~~~gv~I~RvP~~~-~~g~l~~~l~k~~L~~~L~~F~---~~~l~~il~~~---~~~PDVIHsH~~~ 417 (816)
T 3s28_A 347 TTCGERLER--VYDSEYCDILRVPFRT-EKGIVRKWISRFEVWPYLETYT---EDAAVELSKEL---NGKPDLIIGNYSD 417 (816)
T ss_dssp SSTTSSEEE--CTTCSSEEEEEECEEE-TTEEECSCCCTTTCGGGHHHHH---HHHHHHHHHHC---SSCCSEEEEEHHH
T ss_pred CccCCccee--ecCcCCeEEEEecCCC-ccccccccccHHHHHHHHHHHH---HHHHHHHHHhc---CCCCeEEEeCCch
Confidence 000 0112467777776321 100 011112222222222 12334444432 2468999876432
Q ss_pred -cc-HHHHHHHcCCCceEec
Q 026707 126 -PW-ALDVAKKFGLVGAAFL 143 (234)
Q Consensus 126 -~~-~~~vA~~lgiP~v~f~ 143 (234)
.+ +..+|+.+|||.+...
T Consensus 418 sglva~llar~~gvP~V~T~ 437 (816)
T 3s28_A 418 GNLVASLLAHKLGVTQCTIA 437 (816)
T ss_dssp HHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEE
Confidence 22 4578888999988653
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=84.18 E-value=3.7 Score=34.10 Aligned_cols=112 Identities=13% Similarity=0.050 Sum_probs=55.4
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHHhC-CCEEEEEeCcccccccccCCCCCCCCceE-EeccCCCCCCCCCCccCHHHHH
Q 026707 14 VHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTYFISKSLHRDSSSPSTSISL-EAISDGYDEGGSAQTEGVEAYL 91 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P~l~La~~La~~-G~~VT~vt~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~~~ 91 (234)
.+|+++.-. .+.......|++.|.++ ||+|.++++.......... ... .++.+ ..++ + . + .........
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~--~-~-~--~~~~~~~~~ 76 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQA-LSL-FGIQEDRNLD--V-M-Q--ERQALPDLA 76 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHH-HHT-TTCCCSEECC--C-C-S--SCCCHHHHH
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHH-HHH-cCCCcccccc--c-C-C--CCccHHHHH
Confidence 578877632 23344567789999988 7998877664322111100 000 12222 1221 1 0 1 011121111
Q ss_pred HHHHHhCcHHHHHHHHhhhCCCCCccEEEe--CCCCccH-HHHHHHcCCCceEec
Q 026707 92 ERFWQIGPRSLCELVENMNGSGVPVDCIVY--DSFLPWA-LDVAKKFGLVGAAFL 143 (234)
Q Consensus 92 ~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 143 (234)
... ...+.+++++ .+||+|++ +....|. ..+|+.+|||.+.+.
T Consensus 77 ---~~~-~~~l~~~l~~-----~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 122 (376)
T 1v4v_A 77 ---ARI-LPQAARALKE-----MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE 122 (376)
T ss_dssp ---HHH-HHHHHHHHHH-----TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred ---HHH-HHHHHHHHHH-----cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence 110 1234455543 36899988 3333454 567888999987654
No 30
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=83.74 E-value=2.1 Score=36.24 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=32.1
Q ss_pred CCCceEEEEeC-CC-ccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 11 CKRVHCLVLSY-PA-QGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 11 ~~~~hv~~~p~-p~-~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
.++.+|+++.. +. .|+-..+..|++.|+++||+|++++...
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~ 80 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEG 80 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 35568875543 33 4888999999999999999999988754
No 31
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=83.54 E-value=1.4 Score=36.27 Aligned_cols=28 Identities=18% Similarity=0.024 Sum_probs=24.6
Q ss_pred ccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 24 QGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 24 ~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
.|.-.-...|++.|.++||+|++++...
T Consensus 30 gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4677889999999999999999998764
No 32
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=81.50 E-value=1.6 Score=32.51 Aligned_cols=53 Identities=17% Similarity=0.223 Sum_probs=36.7
Q ss_pred CcchhHhhhc--CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccc
Q 026707 1 MENIEKKAAS--CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFIS 53 (234)
Q Consensus 1 ~~~~~~~~~~--~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~ 53 (234)
|+.|...+.. .++++|++...++-+|-....-++..|..+|++|.++-.....
T Consensus 4 l~~l~~~~~~~~~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~ 58 (161)
T 2yxb_A 4 LQSTRERVLGTPRRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTP 58 (161)
T ss_dssp ------------CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCH
T ss_pred HHHHHHHHHhhcCCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 3445554422 3578999999999999999999999999999999987654333
No 33
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=80.79 E-value=1.6 Score=36.16 Aligned_cols=37 Identities=16% Similarity=0.286 Sum_probs=29.3
Q ss_pred eEEEEe---CCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 15 HCLVLS---YPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 15 hv~~~p---~p~~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
+|+++. .|.-|.-.-+..|++.|+++||+|++++...
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 41 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW 41 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence 455552 2455778889999999999999999999763
No 34
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=80.61 E-value=1.3 Score=38.05 Aligned_cols=40 Identities=23% Similarity=0.262 Sum_probs=29.1
Q ss_pred CCceEEEEeCC-Cc----cChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 12 KRVHCLVLSYP-AQ----GHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 12 ~~~hv~~~p~p-~~----GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
++.+|+++... .. |=.+-+.+|++.|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 45678765532 22 323458899999999999999999863
No 35
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=79.27 E-value=3.9 Score=33.38 Aligned_cols=86 Identities=16% Similarity=0.180 Sum_probs=51.1
Q ss_pred CCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCCccCHHHHHHHHHHhCcHH
Q 026707 22 PAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGVEAYLERFWQIGPRS 101 (234)
Q Consensus 22 p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (234)
-|.||+.=.+.||++|. +|+|++.......+.. -++.+..++. ++. +.
T Consensus 13 IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~------~g~~v~~l~~----------~d~------------~~ 60 (282)
T 3hbm_A 13 IGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE------IPYPVYELSS----------ESI------------YE 60 (282)
T ss_dssp TBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG------CCSCEEECSS----------SCH------------HH
T ss_pred ccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH------CCCeEEEcCc----------cCH------------HH
Confidence 46799999999999998 7999986543322221 1333333321 111 12
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCc---cHHHHHHHcCCCceEecc
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLP---WALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~---~~~~vA~~lgiP~v~f~~ 144 (234)
+.+++++. ++|+||.|.... |-..+.+..|++.+++--
T Consensus 61 ~~~~l~~~-----~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD 101 (282)
T 3hbm_A 61 LINLIKEE-----KFELLIIDHYGISVDDEKLIKLETGVKILSFDD 101 (282)
T ss_dssp HHHHHHHH-----TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECS
T ss_pred HHHHHHhC-----CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEec
Confidence 23334332 579999998764 334444446888877644
No 36
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=77.48 E-value=3 Score=34.85 Aligned_cols=42 Identities=17% Similarity=0.180 Sum_probs=31.5
Q ss_pred CCceEEEEeC---CC-ccChHHHHHHHHHHHhCCCEEEEEeCcccc
Q 026707 12 KRVHCLVLSY---PA-QGHINPLLQFAKRLEHKGLKVTLVTTYFIS 53 (234)
Q Consensus 12 ~~~hv~~~p~---p~-~GH~~P~l~La~~La~~G~~VT~vt~~~~~ 53 (234)
++.+|+++.. +. .|+-.-+..|++.|+++||+|++++.....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 4567887652 22 466688999999999999999999986543
No 37
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=76.44 E-value=3.9 Score=31.54 Aligned_cols=44 Identities=14% Similarity=-0.074 Sum_probs=37.9
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKS 55 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~ 55 (234)
++.+|++.+.++-.|-....-++..|..+|++|.++-.....+.
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~ 130 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGK 130 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 46789999999999999999999999999999998876544443
No 38
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=74.75 E-value=20 Score=28.72 Aligned_cols=99 Identities=10% Similarity=0.060 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccCCCCCCCCCCccCHHHHHHHHHHhCcHHHHHHHHhh
Q 026707 30 LLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISDGYDEGGSAQTEGVEAYLERFWQIGPRSLCELVENM 109 (234)
Q Consensus 30 ~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l 109 (234)
+..|++.|.+.| +|+++.+...++-...+. ....-+++..+..+. . +.....+.+- +.=.+..+
T Consensus 17 i~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-t~~~pl~~~~~~~~~-~--~~v~GTPaDC-----------V~lal~~l 80 (251)
T 2phj_A 17 INALREALKSLG-RVVVVAPDRNLSGVGHSL-TFTEPLKMRKIDTDF-Y--TVIDGTPADC-----------VHLGYRVI 80 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-CCSSCEEEEEEETTE-E--EETTCCHHHH-----------HHHHHHTT
T ss_pred HHHHHHHHHhcC-CEEEEecCCCccCCccce-ecCCCeEEEEecCCC-e--EEECCCHHHH-----------HHHHHHHh
Confidence 678899999888 999999987765443210 011235555543221 0 1111112111 11112222
Q ss_pred hCCCCCccEEEe----------CCCCccH---HHHHHHcCCCceEeccc
Q 026707 110 NGSGVPVDCIVY----------DSFLPWA---LDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 110 ~~~~~~~d~vI~----------D~~~~~~---~~vA~~lgiP~v~f~~~ 145 (234)
.. ..+||+||+ |.+.+.+ +--|..+|||.+.|+-.
T Consensus 81 ~~-~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 81 LE-EKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp TT-TCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cC-CCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 21 136899997 4444433 34455689999999763
No 39
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=74.35 E-value=7.9 Score=32.90 Aligned_cols=114 Identities=9% Similarity=-0.020 Sum_probs=58.1
Q ss_pred hcCCCceEEEEeCCCccChHHHHHHHHHHHhC-CCEEEEEeCccccc---ccccCCCCCCCCceE-EeccCCCCCCCCCC
Q 026707 9 ASCKRVHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTYFISK---SLHRDSSSPSTSISL-EAISDGYDEGGSAQ 83 (234)
Q Consensus 9 ~~~~~~hv~~~p~p~~GH~~P~l~La~~La~~-G~~VT~vt~~~~~~---~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~ 83 (234)
++.++.+|+++. .......=+..|.++|.++ |+++.++.|....+ ..... -+|+. ..+. + . + .
T Consensus 21 ~~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~-----~~i~~~~~l~--~-~-~--~ 88 (396)
T 3dzc_A 21 QSNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLEL-----FSITPDFDLN--I-M-E--P 88 (396)
T ss_dssp ---CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHH-----TTCCCSEECC--C-C-C--T
T ss_pred HhCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHh-----cCCCCceeee--c-C-C--C
Confidence 334556777665 4456677778888899886 78887665543221 11110 01110 0111 1 0 0 0
Q ss_pred ccCHHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEe--CCCCccH-HHHHHHcCCCceEec
Q 026707 84 TEGVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVY--DSFLPWA-LDVAKKFGLVGAAFL 143 (234)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 143 (234)
........ .. ....+++++++. +||+|+. |....|+ ...|+++|||.+.+.
T Consensus 89 ~~~~~~~~---~~-~~~~l~~~l~~~-----kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 89 GQTLNGVT---SK-ILLGMQQVLSSE-----QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp TCCHHHHH---HH-HHHHHHHHHHHH-----CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred CCCHHHHH---HH-HHHHHHHHHHhc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 11222211 11 123456666653 6898876 3334354 578888999988763
No 40
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=72.87 E-value=6.1 Score=28.35 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=36.5
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKS 55 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~ 55 (234)
.+++|++...++-+|-....-++..|..+|++|..+-.....+.
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 35789999989999999999999999999999998766544433
No 41
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=71.11 E-value=5.4 Score=35.57 Aligned_cols=40 Identities=13% Similarity=0.288 Sum_probs=28.9
Q ss_pred CCCceEEEEeC---CC--ccCh-HHHHHHHHHHHhCCCEEEEEeCc
Q 026707 11 CKRVHCLVLSY---PA--QGHI-NPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 11 ~~~~hv~~~p~---p~--~GH~-~P~l~La~~La~~G~~VT~vt~~ 50 (234)
.++.||+++.. |. .|=+ .-+-.|+++|+++||+|+++++.
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 45679999852 32 1222 45678999999999999999864
No 42
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=71.11 E-value=7 Score=31.33 Aligned_cols=45 Identities=9% Similarity=-0.082 Sum_probs=38.2
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKS 55 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~ 55 (234)
.++++|++.+.++-.|-....-++..|..+|++|.++-.....+.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~ 165 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEE 165 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 456799999999999999999999999999999998876544333
No 43
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=70.22 E-value=4.6 Score=34.87 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=27.7
Q ss_pred eEEEEeC---C---CccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 15 HCLVLSY---P---AQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 15 hv~~~p~---p---~~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
+|+++.. | .-|=-.-+..|++.|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred eEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 5666643 2 23445678899999999999999998753
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=68.47 E-value=5.4 Score=34.37 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=27.2
Q ss_pred eEEEEeC---C--Cc-cChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 15 HCLVLSY---P--AQ-GHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 15 hv~~~p~---p--~~-GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
+|+++.. | .. |=-.-+..|++.|+++||+|+++++..
T Consensus 2 kIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp EEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred eEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 5666643 2 12 434667899999999999999999753
No 45
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=64.94 E-value=9.4 Score=29.71 Aligned_cols=46 Identities=7% Similarity=0.003 Sum_probs=38.0
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSL 56 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~ 56 (234)
.++.+|++.+.++-.|-....-++..|..+|++|..+-..-..+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 3467999999999999999999999999999999998765444443
No 46
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=64.41 E-value=9.1 Score=29.79 Aligned_cols=45 Identities=11% Similarity=0.007 Sum_probs=36.3
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSL 56 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~ 56 (234)
+++.||++--..+.|-+. ...|.+.|.++|++|.++.|+.....+
T Consensus 2 ~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 2 SGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 345688877777777766 889999999999999999998766554
No 47
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=64.38 E-value=56 Score=26.47 Aligned_cols=101 Identities=11% Similarity=-0.000 Sum_probs=61.9
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhC--CCEEEEEeCcccccccccCCCCCCCCc-eEEeccCCCCCCCCCCccCHHHHH
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLHRDSSSPSTSI-SLEAISDGYDEGGSAQTEGVEAYL 91 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~--G~~VT~vt~~~~~~~~~~~~~~~~~~i-~~~~l~~~~~~~~~~~~~~~~~~~ 91 (234)
+|+++-.-+.|-+.-...+.+.|.++ |.+|++++.+...+.+.. .+.+ ++..++. ..+ ...
T Consensus 2 kILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~-----~p~i~~v~~~~~---~~~---~~~----- 65 (348)
T 1psw_A 2 KILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR-----MPEVNEAIPMPL---GHG---ALE----- 65 (348)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT-----CTTEEEEEEC-------------C-----
T ss_pred eEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----CCccCEEEEecC---Ccc---ccc-----
Confidence 68888877779998888899999876 999999999866654432 2445 3443321 000 000
Q ss_pred HHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCCCc-cHHHHHHHcCCCceE
Q 026707 92 ERFWQIGPRSLCELVENMNGSGVPVDCIVYDSFLP-WALDVAKKFGLVGAA 141 (234)
Q Consensus 92 ~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~~~-~~~~vA~~lgiP~v~ 141 (234)
...+.++.+.+.+ .++|++| |.--. ....++...|+|..+
T Consensus 66 -------~~~~~~l~~~l~~--~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 66 -------IGERRKLGHSLRE--KRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------HHHHHHHHHHTTT--TTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred -------hHHHHHHHHHHHh--cCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 1122344445532 4799888 54333 345677778999743
No 48
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=61.38 E-value=10 Score=29.04 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=33.7
Q ss_pred cHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecccc
Q 026707 99 PRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (234)
Q Consensus 99 ~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~~ 146 (234)
.+..++.++++.+ .++++||.|.. +...|+++|+|.+.+.++.
T Consensus 128 ~~e~~~~i~~l~~--~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 128 EDEITTLISKVKT--ENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGGHHHHHHHHHH--TTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHHH--CCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 3567777777754 46899999864 6899999999999887744
No 49
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=59.49 E-value=20 Score=26.90 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=32.5
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 026707 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSL 56 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~ 56 (234)
.||++.-..+.|=+ =..+|.++|.++|++|.++.|+...+.+
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 47776665555544 4889999999999999999998776554
No 50
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=58.86 E-value=11 Score=31.95 Aligned_cols=106 Identities=12% Similarity=0.028 Sum_probs=55.4
Q ss_pred eCCCccChHHHHHHHHHHHhCCCEEEEEeCccccc-ccccCCCCCCCCceEEeccC-CCCCCCCCCccCHHHHHHHHHHh
Q 026707 20 SYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK-SLHRDSSSPSTSISLEAISD-GYDEGGSAQTEGVEAYLERFWQI 97 (234)
Q Consensus 20 p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~-~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 97 (234)
-+.++--+.=|..+.++|.++ ++..++.|....+ .+... -..++.+. -|| .+...+ .+....+..
T Consensus 15 v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~---~~~~~~i~-~~~~~l~~~~----~~~~~~~~~---- 81 (385)
T 4hwg_A 15 IVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQV---FFDDMGIR-KPDYFLEVAA----DNTAKSIGL---- 81 (385)
T ss_dssp EECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHH---HHC-CCCC-CCSEECCCCC----CCSHHHHHH----
T ss_pred EEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHH---HHhhCCCC-CCceecCCCC----CCHHHHHHH----
Confidence 345667777788888888777 8877776653322 22110 00011110 111 111111 112222211
Q ss_pred CcHHHHHHHHhhhCCCCCccEEEe--CCCCccHHHHHHHcCCCceEec
Q 026707 98 GPRSLCELVENMNGSGVPVDCIVY--DSFLPWALDVAKKFGLVGAAFL 143 (234)
Q Consensus 98 ~~~~l~~ll~~l~~~~~~~d~vI~--D~~~~~~~~vA~~lgiP~v~f~ 143 (234)
+...+++++++. +||+||. |....|+...|.++|||.+.+.
T Consensus 82 ~~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 82 VIEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 123466666653 5787765 5555677788899999977664
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=58.13 E-value=55 Score=27.05 Aligned_cols=105 Identities=14% Similarity=0.070 Sum_probs=65.7
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhC--CCEEEEEeCcccccccccCCCCCCCCce-EEeccCCCCCCCCCCccCHH
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLHRDSSSPSTSIS-LEAISDGYDEGGSAQTEGVE 88 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~--G~~VT~vt~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~ 88 (234)
...+|+++-.-+.|.+.-...+.+.|.++ +.+|++++.+.+.+.+.. .+.|+ ++.++.. + ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~-----~p~vd~vi~~~~~----~------~~ 71 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY-----NPNIDELIVVDKK----G------RH 71 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS-----CTTCSEEEEECCS----S------HH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----CCCccEEEEeCcc----c------cc
Confidence 34689999999999999999999999886 899999999887765542 24554 4444311 1 00
Q ss_pred HHHHHHHHhCcHHHHHHHHhhhCCCCCc-cEEEeCCCCccHHHHHHHcCCCceE
Q 026707 89 AYLERFWQIGPRSLCELVENMNGSGVPV-DCIVYDSFLPWALDVAKKFGLVGAA 141 (234)
Q Consensus 89 ~~~~~~~~~~~~~l~~ll~~l~~~~~~~-d~vI~D~~~~~~~~vA~~lgiP~v~ 141 (234)
. .+. .+.++++.+.+ .++ |++|.=.-......++.-.|+|..+
T Consensus 72 ~---~~~-----~~~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 72 N---SIS-----GLNEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp H---HHH-----HHHHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred c---cHH-----HHHHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 011 12233333322 368 9877422223345677788998543
No 52
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=57.76 E-value=21 Score=27.68 Aligned_cols=44 Identities=14% Similarity=0.089 Sum_probs=35.3
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLH 57 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~ 57 (234)
++.||++.-..+.+-+. ...|.++|.++| +|.++.|+...+.+.
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 35688888877777766 899999999999 999999987765553
No 53
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=56.46 E-value=18 Score=28.51 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=35.8
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
+.+..|++.--||.|=..-++.+|..|+++|++|.++....
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45677888888999999999999999999999998877754
No 54
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=56.14 E-value=8.8 Score=27.56 Aligned_cols=34 Identities=18% Similarity=0.413 Sum_probs=26.4
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
++.||+++- .|++- ..+++.|.++|++|+++...
T Consensus 2 ~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 456888874 35554 78899999999999999874
No 55
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=55.67 E-value=12 Score=26.30 Aligned_cols=40 Identities=15% Similarity=-0.033 Sum_probs=25.9
Q ss_pred HHHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHH---cCCCceEe
Q 026707 101 SLCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKK---FGLVGAAF 142 (234)
Q Consensus 101 ~l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~---lgiP~v~f 142 (234)
.-++.++.+.+ .+||+||.|..++- +.+++++ .++|.+.+
T Consensus 41 ~g~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 41 RMQEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CHHHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CHHHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 34555554432 47999999998863 4555554 47886654
No 56
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=55.38 E-value=11 Score=32.04 Aligned_cols=38 Identities=18% Similarity=0.261 Sum_probs=25.2
Q ss_pred CCCceEEEEe---CCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 11 CKRVHCLVLS---YPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 11 ~~~~hv~~~p---~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
.++.+|+++. || .+.-.-...+++.|+++| +|++++..
T Consensus 12 ~~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 12 IRRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp -CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 3456888776 55 222223456788899999 99999543
No 57
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=54.70 E-value=12 Score=26.73 Aligned_cols=39 Identities=21% Similarity=0.123 Sum_probs=30.0
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK 54 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~ 54 (234)
..+++++. +-.=+.|++.+++.|+++|.+|+++ ...+.+
T Consensus 18 ~~~~llIa--GG~GiaPl~sm~~~l~~~~~~v~l~-g~R~~~ 56 (142)
T 3lyu_A 18 FGKILAIG--AYTGIVEVYPIAKAWQEIGNDVTTL-HVTFEP 56 (142)
T ss_dssp CSEEEEEE--ETTHHHHHHHHHHHHHHTTCEEEEE-EEEEGG
T ss_pred CCeEEEEE--CcCcHHHHHHHHHHHHhcCCcEEEE-EeCCHH
Confidence 35677776 4445899999999999999999998 554433
No 58
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=54.25 E-value=82 Score=25.20 Aligned_cols=31 Identities=26% Similarity=0.143 Sum_probs=23.4
Q ss_pred CccEE-EeCCCCc-cHHHHHHHcCCCceEeccc
Q 026707 115 PVDCI-VYDSFLP-WALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 115 ~~d~v-I~D~~~~-~~~~vA~~lgiP~v~f~~~ 145 (234)
-||+| |.|.--- -+..-|.++|||.|.+.-+
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 46755 6887653 5778899999999998644
No 59
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=53.83 E-value=18 Score=26.72 Aligned_cols=50 Identities=16% Similarity=0.265 Sum_probs=35.0
Q ss_pred CcchhHhhhcCCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 1 MENIEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 1 ~~~~~~~~~~~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
|..|+.+-...+..-|++.-.+|.|=-.-...|++.|..+|..|.++...
T Consensus 1 ~~~~~~~~~~~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d 50 (186)
T 2yvu_A 1 MQALTTYKCIEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGD 50 (186)
T ss_dssp -------CCCSCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CcccccccccCCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHH
Confidence 67788866445556788888999999999999999999999998877544
No 60
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=52.97 E-value=12 Score=29.34 Aligned_cols=41 Identities=12% Similarity=0.245 Sum_probs=32.3
Q ss_pred cHHHHHHHHhhhCCCCCccEEEeCCCCccHHHHHHHcCCCceEecc
Q 026707 99 PRSLCELVENMNGSGVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 99 ~~~l~~ll~~l~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (234)
.+..++.++++.+ .++++||.|.. +...|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~--~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA--NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH--CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 3466777777754 46899999864 68999999999998874
No 61
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=49.86 E-value=61 Score=27.38 Aligned_cols=26 Identities=27% Similarity=0.561 Sum_probs=18.4
Q ss_pred CCccEEEe--CCCCccHHHHHHHcCCCc
Q 026707 114 VPVDCIVY--DSFLPWALDVAKKFGLVG 139 (234)
Q Consensus 114 ~~~d~vI~--D~~~~~~~~vA~~lgiP~ 139 (234)
.++|.|+. |.....+..+|++||+|.
T Consensus 74 ~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 74 FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 46888874 444445678899999983
No 62
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=48.16 E-value=23 Score=27.54 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=31.6
Q ss_pred HHHHHHHhhhCCC--CCccEEEeCCCCccHHHHHHHcCCCceEeccc
Q 026707 101 SLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 101 ~l~~ll~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
.|+++++...... ..+.+||+|---..+...|+++|||.+.+.+.
T Consensus 15 nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~ 61 (211)
T 3p9x_A 15 NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALDPK 61 (211)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChh
Confidence 4666666553221 24789999965445678999999999987654
No 63
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=46.52 E-value=37 Score=22.62 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=27.8
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHHc-------CCCceEecccc
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKF-------GLVGAAFLTQS 146 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 146 (234)
.++.++.+.. .+||+||.|..++- +.++.+++ ++|.+.+....
T Consensus 35 ~~~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 35 GQIALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 3455554432 46899999998753 55666654 47877766544
No 64
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=46.34 E-value=67 Score=28.47 Aligned_cols=96 Identities=13% Similarity=0.201 Sum_probs=52.6
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEeccC--CCCCCCCCC-ccCH-HH
Q 026707 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAISD--GYDEGGSAQ-TEGV-EA 89 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~~--~~~~~~~~~-~~~~-~~ 89 (234)
.+-+++.. ++-.-+..+++.|.+.|++| +.|....+.+.. .+|.+..+.+ ++ |+-+.. ...+ +.
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~lGfeI--~ATgGTak~L~e------~GI~v~~V~~vTgf-PEil~GRVKTLHP~ 77 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSAAGVEI--ISTGSTAKTIAD------TGIPVTPVEQLTGF-PEVLDGRVKTLHPR 77 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHHTTCEE--EECHHHHHHHHT------TTCCCEEHHHHHSC-CCCTTTTSSSCSHH
T ss_pred ccEEEEEE---eccccHHHHHHHHHHCCCEE--EEcchHHHHHHH------cCCceeeccccCCC-chhhCCccccCCch
Confidence 34555555 35556889999999999874 577777776754 3566666542 44 332221 1111 22
Q ss_pred HHH-HHHH-hCcHHHHHHHHhhhCCCCCccEEEeCCC
Q 026707 90 YLE-RFWQ-IGPRSLCELVENMNGSGVPVDCIVYDSF 124 (234)
Q Consensus 90 ~~~-~~~~-~~~~~l~~ll~~l~~~~~~~d~vI~D~~ 124 (234)
... .+.+ ...+..++ +++.. -.++|+||++.+
T Consensus 78 ihgGiLa~r~~~~h~~~-l~~~~--i~~iDlVvvNLY 111 (523)
T 3zzm_A 78 VHAGLLADLRKSEHAAA-LEQLG--IEAFELVVVNLY 111 (523)
T ss_dssp HHHHHHCCTTSHHHHHH-HHHHT--CCCCSEEEEECC
T ss_pred hhhhhccCCCCHHHHHH-HHHCC--CCceeEEEEeCC
Confidence 222 2221 12233333 33321 257999999874
No 65
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=45.83 E-value=29 Score=26.89 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=30.4
Q ss_pred HHHHHHHhhhCCC--CCccEEEeCCCCccHHHHHHHcCCCceEecc
Q 026707 101 SLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 101 ~l~~ll~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (234)
.++++++.+.... ..+.+||+|---.-+...|+++|||.+.+..
T Consensus 20 nl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 20 NMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 4566666654321 2467899985444467899999999998754
No 66
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=45.70 E-value=22 Score=25.23 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=24.2
Q ss_pred CCccEEEeCCCCcc--HHHHHHHc-------CCCceEecccc
Q 026707 114 VPVDCIVYDSFLPW--ALDVAKKF-------GLVGAAFLTQS 146 (234)
Q Consensus 114 ~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 146 (234)
.+||+||.|..++- +.++++++ ++|.+.+...+
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 46899999999874 56777765 47877765544
No 67
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=44.00 E-value=28 Score=26.43 Aligned_cols=43 Identities=21% Similarity=0.128 Sum_probs=33.8
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 026707 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLH 57 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~ 57 (234)
.||++.-..+.|-+ =...|.++|.++|++|.++.|+...+.+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 46777777777755 47889999999999999999987665553
No 68
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=43.79 E-value=35 Score=25.75 Aligned_cols=43 Identities=9% Similarity=0.055 Sum_probs=31.8
Q ss_pred ceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccccc
Q 026707 14 VHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSLH 57 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~~ 57 (234)
.||++.-..+.|=+ =...|.++|.++|++|.++.|+...+.+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 35665555555444 67899999999999999999987665543
No 69
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.69 E-value=35 Score=23.30 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=23.9
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..+|+++ |.|.+- ..+++.|.++|++|+++...
T Consensus 4 ~m~i~Ii---G~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA---GIGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE---CCSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3577777 346653 46789999999999988654
No 70
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=43.19 E-value=15 Score=29.27 Aligned_cols=26 Identities=31% Similarity=0.475 Sum_probs=19.8
Q ss_pred CccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 23 AQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 23 ~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
+.|.+= .+|+++|.++||+|+.++-.
T Consensus 8 atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 8 GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 445442 57899999999999998754
No 71
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=42.85 E-value=20 Score=33.15 Aligned_cols=44 Identities=16% Similarity=0.148 Sum_probs=32.6
Q ss_pred hcCCCceEEEEeCCCc---cChHHHHH-HHHHHHh-CCCEEEEEeCccc
Q 026707 9 ASCKRVHCLVLSYPAQ---GHINPLLQ-FAKRLEH-KGLKVTLVTTYFI 52 (234)
Q Consensus 9 ~~~~~~hv~~~p~p~~---GH~~P~l~-La~~La~-~G~~VT~vt~~~~ 52 (234)
.+....||+..|..+. ||..|++. |.+-+.. -||+|+|+.++..
T Consensus 378 ~~~~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 378 APAKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp CCSSCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred CCCCcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 3445678999997666 99999998 6654433 3999999988743
No 72
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=42.83 E-value=20 Score=26.08 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=29.4
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK 54 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~ 54 (234)
..+++++. .|.| +.|++.+++.|.++|.+|+++ ...+.+
T Consensus 23 ~~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~~ 61 (158)
T 3lrx_A 23 FGKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFEP 61 (158)
T ss_dssp CSEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBGG
T ss_pred CCeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCHH
Confidence 34677766 2334 999999999999989899999 654443
No 73
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=42.47 E-value=28 Score=26.70 Aligned_cols=42 Identities=14% Similarity=0.144 Sum_probs=31.7
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhC-CCEEEEEeCcccccccc
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTYFISKSLH 57 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~-G~~VT~vt~~~~~~~~~ 57 (234)
+|++--..+.|-+. ...|.++|.++ |++|.++.|+...+.+.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 56655555555554 89999999998 99999999987665543
No 74
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=41.69 E-value=33 Score=30.95 Aligned_cols=44 Identities=5% Similarity=-0.055 Sum_probs=38.0
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccccc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKS 55 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~ 55 (234)
++.+|++.+.++-.|-+...-++..|..+|++|..+-.....+.
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~ 140 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEK 140 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 46799999999999999999999999999999998876544443
No 75
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=41.41 E-value=18 Score=28.25 Aligned_cols=48 Identities=15% Similarity=0.173 Sum_probs=33.0
Q ss_pred CcchhHhhhcCCCceEEEEeCCCccChHHHHHHHHHHHh-CCCEEEEEe
Q 026707 1 MENIEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEH-KGLKVTLVT 48 (234)
Q Consensus 1 ~~~~~~~~~~~~~~hv~~~p~p~~GH~~P~l~La~~La~-~G~~VT~vt 48 (234)
|-++|.++...+..-|++--.+|.|=-.-.-.|++.|.. +|++|.+++
T Consensus 9 ~~~~~~~~~~~~~~~i~~~G~~g~GKst~~~~l~~~l~~~~g~~v~~~t 57 (223)
T 3ld9_A 9 MGTLEAQTQGPGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLT 57 (223)
T ss_dssp ----------CCCEEEEEECSTTSSHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred cccccccccCCCCeEEEEECCCCCCHHHHHHHHHHHHhhccCceeeEee
Confidence 678999997777778888899999999999999999999 999877644
No 76
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=41.09 E-value=40 Score=25.89 Aligned_cols=43 Identities=21% Similarity=0.040 Sum_probs=32.1
Q ss_pred CceEEEEeCCCccChH-HHHHHHHHHHhCCCEEEEEeCccccccc
Q 026707 13 RVHCLVLSYPAQGHIN-PLLQFAKRLEHKGLKVTLVTTYFISKSL 56 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~-P~l~La~~La~~G~~VT~vt~~~~~~~~ 56 (234)
..||++--..+ +... =...|.++|.++|++|.++.|+...+.+
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 45776555444 5555 6899999999999999999998665444
No 77
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=40.94 E-value=17 Score=32.07 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=26.8
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..++|||++--..-| +.+|++|.++|++||++...
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 457899988643333 57889999999999999765
No 78
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=40.88 E-value=39 Score=26.08 Aligned_cols=45 Identities=16% Similarity=0.253 Sum_probs=31.4
Q ss_pred HHHHHHHhhhCC--CCCccEEEeCCCCccHHHHHHHcCCCceEeccc
Q 026707 101 SLCELVENMNGS--GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 101 ~l~~ll~~l~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
.|+.+++.+... +..+.+||++.--..+...|+++|||.+.+.+.
T Consensus 13 ~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 59 (209)
T 1meo_A 13 NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHK 59 (209)
T ss_dssp THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECcc
Confidence 456666654332 124678999976566778899999999987553
No 79
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=39.43 E-value=25 Score=26.85 Aligned_cols=43 Identities=7% Similarity=-0.001 Sum_probs=32.3
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccccc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISKSL 56 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~~~ 56 (234)
+.||++.-..+.|=+. ...|.+.|.++|++|.++.|+...+.+
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 3477766655555554 789999999999999999998665544
No 80
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=38.81 E-value=17 Score=27.30 Aligned_cols=18 Identities=33% Similarity=0.396 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 026707 31 LQFAKRLEHKGLKVTLVT 48 (234)
Q Consensus 31 l~La~~La~~G~~VT~vt 48 (234)
+-+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678899999999999984
No 81
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=38.28 E-value=37 Score=26.34 Aligned_cols=44 Identities=7% Similarity=0.180 Sum_probs=29.6
Q ss_pred HHHHHHHhhhCC-CCCccEEEeCCCCccHHHHHHHcCCCceEecc
Q 026707 101 SLCELVENMNGS-GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 101 ~l~~ll~~l~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (234)
.++++++..... ...+.+||+|---..+...|+++|||.+.+..
T Consensus 18 nl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~ 62 (215)
T 3tqr_A 18 NLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIPH 62 (215)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 455555554321 12477899986544567899999999998754
No 82
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=38.24 E-value=42 Score=25.85 Aligned_cols=46 Identities=24% Similarity=0.188 Sum_probs=32.9
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHh-CCCEEEEEeCcccccccc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEH-KGLKVTLVTTYFISKSLH 57 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~-~G~~VT~vt~~~~~~~~~ 57 (234)
.++.||++.-..+.+ ..=...|.++|.+ +|++|.++.|+...+.+.
T Consensus 17 l~~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp CSSEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred cCCCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 345677776666655 4446899999998 899999999987765553
No 83
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=38.20 E-value=37 Score=26.34 Aligned_cols=44 Identities=16% Similarity=0.306 Sum_probs=29.8
Q ss_pred HHHHHHHhhhCCC--CCccEEEeCCCCccHHHHHHHcCCCceEecc
Q 026707 101 SLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 101 ~l~~ll~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (234)
.++++++.+.+.. ..+.+||+|---.-+...|+++|||.+.+-.
T Consensus 21 nl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 21 NLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 4566666654321 2467899985434467899999999998754
No 84
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=36.79 E-value=43 Score=25.82 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=28.8
Q ss_pred HHHHHHhhhCC--CCCccEEEeCCCCccHHHHHHHcCCCceEeccc
Q 026707 102 LCELVENMNGS--GVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 102 l~~ll~~l~~~--~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
++.+++.+.+. +..+.+||++---..+...|+++|||.+.+.+.
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~ 62 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPK 62 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcc
Confidence 44555554432 124667898854445678899999999976553
No 85
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=36.60 E-value=46 Score=25.69 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=28.1
Q ss_pred CceEEEEeCCCccChHH-HHHHHHHHHhCCCEEEEEeCcccc
Q 026707 13 RVHCLVLSYPAQGHINP-LLQFAKRLEHKGLKVTLVTTYFIS 53 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P-~l~La~~La~~G~~VT~vt~~~~~ 53 (234)
..+|++--..+ +...- ...|.++|.++|++|.++.|+...
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 35676555444 44544 789999999999999999987655
No 86
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=36.22 E-value=61 Score=22.73 Aligned_cols=38 Identities=8% Similarity=-0.019 Sum_probs=26.6
Q ss_pred ceEEEEeC-C--CccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 14 VHCLVLSY-P--AQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 14 ~hv~~~p~-p--~~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
.+++++-. + .......-+.+|...++.|++|+++-+..
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 45554433 3 34566788889999999999999876653
No 87
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=35.78 E-value=23 Score=26.04 Aligned_cols=43 Identities=21% Similarity=0.313 Sum_probs=31.4
Q ss_pred EEEEeCCCccChHH-HHHHHHHHHhCCCEEEEEeCccccccccc
Q 026707 16 CLVLSYPAQGHINP-LLQFAKRLEHKGLKVTLVTTYFISKSLHR 58 (234)
Q Consensus 16 v~~~p~p~~GH~~P-~l~La~~La~~G~~VT~vt~~~~~~~~~~ 58 (234)
++++-.|-.-=..| .+-|+.+|-.+||+||+..++...+.++.
T Consensus 10 LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLlev 53 (157)
T 1kjn_A 10 LMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQV 53 (157)
T ss_dssp EEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred eEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheec
Confidence 33555555533444 78899999999999999999887766543
No 88
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=35.51 E-value=53 Score=25.34 Aligned_cols=44 Identities=14% Similarity=0.311 Sum_probs=29.5
Q ss_pred HHHHHHhhhCCCC--CccEEEeCCCCccHHHHHHHcCCCceEeccc
Q 026707 102 LCELVENMNGSGV--PVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 102 l~~ll~~l~~~~~--~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
++.+++.+.+.+. .+.+||++.--..+...|+++|||.+.+.+.
T Consensus 15 ~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 15 LQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp HHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGG
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcc
Confidence 4555555543322 4578898864445678899999999986554
No 89
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=35.27 E-value=30 Score=27.32 Aligned_cols=21 Identities=29% Similarity=0.267 Sum_probs=18.2
Q ss_pred HHHHHHHHhCCCEEEEEeCcc
Q 026707 31 LQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 31 l~La~~La~~G~~VT~vt~~~ 51 (234)
..+|++|+.+|++||++..+.
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHCCCEEEEEeCCc
Confidence 568999999999999998764
No 90
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=35.08 E-value=53 Score=24.64 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=27.3
Q ss_pred hHhhhcCCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 026707 5 EKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (234)
Q Consensus 5 ~~~~~~~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~ 49 (234)
+.......++.|++++-.+ |...-...+++.|+++|++|..+--
T Consensus 4 ~~~~~~~~~~~vvllHG~~-~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 4 EKSMSPFVKKHFVLVHAAF-HGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp ------CCCCEEEEECCTT-CCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCCCCCCCCeEEEECCCC-CCcchHHHHHHHHHhcCCeEEEecc
Confidence 4444344566777777544 4555567899999999999876644
No 91
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=34.89 E-value=27 Score=24.36 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=25.1
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
+.||+++-+ |.+ -..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 457887754 543 467899999999999988764
No 92
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=33.78 E-value=40 Score=27.41 Aligned_cols=39 Identities=8% Similarity=0.139 Sum_probs=29.0
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhC-C-CEEEEEeCcc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHK-G-LKVTLVTTYF 51 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~-G-~~VT~vt~~~ 51 (234)
++.+|+++. ...++......+++.|.++ | ++|.++++..
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 47 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQ 47 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCS
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCC
Confidence 346888876 3457778888999999887 5 8887777653
No 93
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=33.41 E-value=53 Score=25.31 Aligned_cols=44 Identities=11% Similarity=0.260 Sum_probs=30.6
Q ss_pred HHHHHHHhhhCCC--CCccEEEeCCCCccHHHHHHHcCCCceEecc
Q 026707 101 SLCELVENMNGSG--VPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (234)
Q Consensus 101 ~l~~ll~~l~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~ 144 (234)
.++.+++.+.+.. ..+.+||++.--..+...|+++|||.+.+..
T Consensus 13 nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~ 58 (212)
T 1jkx_A 13 NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIA 58 (212)
T ss_dssp HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCc
Confidence 4566666654321 2367899986545578899999999998654
No 94
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.72 E-value=61 Score=21.94 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=25.8
Q ss_pred HHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHHc-------CCCceEecccc
Q 026707 103 CELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKF-------GLVGAAFLTQS 146 (234)
Q Consensus 103 ~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 146 (234)
++.++.+.. .+||+||.|..++. +.++.+++ ++|.+.+....
T Consensus 38 ~~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 38 EEALQQIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 344444332 46899999998753 45555443 57877765544
No 95
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=32.07 E-value=51 Score=25.79 Aligned_cols=31 Identities=16% Similarity=0.231 Sum_probs=23.4
Q ss_pred CccEEEeCCCCccHHHHHHHcCCCceEeccc
Q 026707 115 PVDCIVYDSFLPWALDVAKKFGLVGAAFLTQ 145 (234)
Q Consensus 115 ~~d~vI~D~~~~~~~~vA~~lgiP~v~f~~~ 145 (234)
.+.+||++---..+...|+++|||.+.+.+.
T Consensus 51 ~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~ 81 (229)
T 3auf_A 51 RVAVVISDRADAYGLERARRAGVDALHMDPA 81 (229)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCEEEECCGG
T ss_pred eEEEEEcCCCchHHHHHHHHcCCCEEEECcc
Confidence 3678898854444678999999999986553
No 96
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=32.04 E-value=87 Score=25.23 Aligned_cols=52 Identities=8% Similarity=0.012 Sum_probs=35.8
Q ss_pred HHHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHHcCCCceEecccchHHHHHHH
Q 026707 101 SLCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKFGLVGAAFLTQSCVVDCIYY 154 (234)
Q Consensus 101 ~l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~lgiP~v~f~~~~a~~~~~~~ 154 (234)
.++++++.+.+ .++.||+++....- +..+|++.|++.+.+.+.+...+.++.
T Consensus 225 ~l~~l~~~ik~--~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m~ 278 (291)
T 1pq4_A 225 ELKQLIDTAKE--NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNLK 278 (291)
T ss_dssp HHHHHHHHHHT--TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHHH
T ss_pred HHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHHH
Confidence 34555555433 46889999987753 568999999999888777664444443
No 97
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=32.01 E-value=32 Score=29.14 Aligned_cols=113 Identities=9% Similarity=0.004 Sum_probs=55.6
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhC--CCEEEEEeCcccccccccCCCCCCCCceE-EeccCCCCCCCCCCccCHHH
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLHRDSSSPSTSISL-EAISDGYDEGGSAQTEGVEA 89 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~--G~~VT~vt~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~ 89 (234)
+.+|+++. .....+.=+..|.++|.++ |+++.++.|....+ +.... -..-+|+. ..+. + . + ...+...
T Consensus 27 ~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~-m~~~~-~~~~~i~~~~~l~--v-~-~--~~~~~~~ 97 (403)
T 3ot5_A 27 KIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHRE-MLDQV-LEIFDIKPDIDLD--I-M-K--KGQTLAE 97 (403)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC------CHHH-HHHTTCCCSEECC--C-C-C---CCCHHH
T ss_pred cceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHH-HHHHH-HHhcCCCCCcccc--c-C-C--CCCCHHH
Confidence 45777666 3445666678888899887 68877666543211 11000 00001110 0111 1 0 0 0112222
Q ss_pred HHHHHHHhCcHHHHHHHHhhhCCCCCccEEEe--CCCCccH-HHHHHHcCCCceEec
Q 026707 90 YLERFWQIGPRSLCELVENMNGSGVPVDCIVY--DSFLPWA-LDVAKKFGLVGAAFL 143 (234)
Q Consensus 90 ~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~--D~~~~~~-~~vA~~lgiP~v~f~ 143 (234)
. ... ....+.+++++. +||+|+. |....|+ ...|+++|||.+.+.
T Consensus 98 ~---~~~-~~~~l~~~l~~~-----kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 98 I---TSR-VMNGINEVIAAE-----NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp H---HHH-HHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred H---HHH-HHHHHHHHHHHc-----CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 1 111 123456666653 6798875 3334453 678889999987654
No 98
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=30.63 E-value=37 Score=23.78 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=26.1
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
.+.||+++-+.-.| ..+++.|.++|++|+++....
T Consensus 6 ~~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 35688888653333 478899999999999998754
No 99
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=30.57 E-value=32 Score=28.42 Aligned_cols=23 Identities=13% Similarity=-0.074 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCEEEEEeCccc
Q 026707 30 LLQFAKRLEHKGLKVTLVTTYFI 52 (234)
Q Consensus 30 ~l~La~~La~~G~~VT~vt~~~~ 52 (234)
-..+|+.++.+|++||+++.+..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHCCCEEEEEecCCC
Confidence 35788999999999999998644
No 100
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=30.52 E-value=42 Score=27.26 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=28.6
Q ss_pred cchhHhhhcCCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 2 ENIEKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 2 ~~~~~~~~~~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
+++..++. .+..+|+++- +.|.+ -.+|+++|+++|++|+.+.-.
T Consensus 15 ~~~~~~~~-~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 15 EEITQQLI-FSPKTWLITG--VAGFI--GSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HHHHHHHH-HSCCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred hhHHhhCC-CCCCeEEEEC--CCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 34444442 2345666654 45554 357899999999999988753
No 101
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=30.32 E-value=58 Score=26.62 Aligned_cols=33 Identities=12% Similarity=0.091 Sum_probs=26.0
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~ 49 (234)
..||.++-..+.| |-.+|+.|+++|++|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 3577777776666 55799999999999998754
No 102
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.71 E-value=71 Score=22.59 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=24.2
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..+|+++- .|.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 45788874 35443 45788999999999988764
No 103
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=29.12 E-value=60 Score=24.29 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=30.1
Q ss_pred CCceEEEEeCCCccC-----hHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 12 KRVHCLVLSYPAQGH-----INPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
...+|+++| |.|= -.++.+|++.|.++|.+|.|...+
T Consensus 22 ~A~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 22 NASKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp TCSEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 456788888 5543 368999999999999999998765
No 104
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=29.00 E-value=95 Score=24.34 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=26.8
Q ss_pred ceEEEE-eC-CCccChHHHHHHHHHHHhCCCEEEEEe
Q 026707 14 VHCLVL-SY-PAQGHINPLLQFAKRLEHKGLKVTLVT 48 (234)
Q Consensus 14 ~hv~~~-p~-p~~GH~~P~l~La~~La~~G~~VT~vt 48 (234)
.+.+++ .. .+.|=..-.+.|++.|.++|.+|.++=
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 344444 43 455888889999999999999999874
No 105
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.98 E-value=90 Score=20.43 Aligned_cols=44 Identities=20% Similarity=0.308 Sum_probs=26.8
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHH----cCCCceEecccch
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKK----FGLVGAAFLTQSC 147 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~----lgiP~v~f~~~~a 147 (234)
.++.++.+.. .+||+||.|..++. +.++.++ .++|.+.+.....
T Consensus 35 ~~~al~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 35 GNEAVEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp HHHHHHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred HHHHHHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 3444544432 46899999998753 3455444 3688777655443
No 106
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=28.72 E-value=1e+02 Score=25.40 Aligned_cols=43 Identities=21% Similarity=0.162 Sum_probs=34.5
Q ss_pred cCCCceEEEEeC-CCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 026707 10 SCKRVHCLVLSY-PAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (234)
Q Consensus 10 ~~~~~hv~~~p~-p~~GH~~P~l~La~~La~~G~~VT~vt~~~~ 52 (234)
......|+++.. +|.|=..-...||..|+++|.+|-++.++..
T Consensus 22 ~~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 22 KKDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp SSCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred ccCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 334455665554 6669999999999999999999999999863
No 107
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=28.23 E-value=63 Score=24.25 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=29.2
Q ss_pred CceEEEEeCCCccC-----hHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGH-----INPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..+|+++| |.|= -.++.+|++.|.++|.+|.|...+
T Consensus 22 A~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 45788888 5442 368999999999999999998765
No 108
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=27.95 E-value=82 Score=24.02 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=59.8
Q ss_pred CCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccc------ccccccCCCCCCCCceEEeccCCCCCCCCCCcc
Q 026707 12 KRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFI------SKSLHRDSSSPSTSISLEAISDGYDEGGSAQTE 85 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~------~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 85 (234)
.+..|+++.-+|.|=..-.+.+|.+.+.+|.+|-|+..-.. ...+.. . .++++....++. . ...
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-----L-~v~~~~~g~gf~---~-~~~ 96 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-----H-GVEFQVMATGFT---W-ETQ 96 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-----G-TCEEEECCTTCC---C-CGG
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-----C-CcEEEEcccccc---c-CCC
Confidence 45679999999999999999999999999999999854321 111211 1 366766654441 1 111
Q ss_pred CHHHHHHHHHHhCcHHHHHHHHhhhCCCCCccEEEeCCC
Q 026707 86 GVEAYLERFWQIGPRSLCELVENMNGSGVPVDCIVYDSF 124 (234)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~d~vI~D~~ 124 (234)
+...-. ......++...+.+.. ..+|+||.|-+
T Consensus 97 ~~~~~~----~~a~~~l~~a~~~l~~--~~yDlvILDEi 129 (196)
T 1g5t_A 97 NREADT----AACMAVWQHGKRMLAD--PLLDMVVLDEL 129 (196)
T ss_dssp GHHHHH----HHHHHHHHHHHHHTTC--TTCSEEEEETH
T ss_pred CcHHHH----HHHHHHHHHHHHHHhc--CCCCEEEEeCC
Confidence 111111 1113345555554432 47999999975
No 109
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=27.33 E-value=63 Score=22.15 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=22.2
Q ss_pred CCccEEEeCCCCcc--HHHHHHHc---------CCCceEecccc
Q 026707 114 VPVDCIVYDSFLPW--ALDVAKKF---------GLVGAAFLTQS 146 (234)
Q Consensus 114 ~~~d~vI~D~~~~~--~~~vA~~l---------giP~v~f~~~~ 146 (234)
.+||+||.|..++. +.++.+++ .+|.+++....
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 46899999987753 45666554 26777765543
No 110
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=26.98 E-value=67 Score=24.58 Aligned_cols=36 Identities=17% Similarity=0.320 Sum_probs=29.1
Q ss_pred CceEEEEeCCCccC-----hHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGH-----INPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..+|+++| +.|= -.++.+|++.|.++|.+|.|...+
T Consensus 46 A~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 46 ASKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp CSEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 45788888 5542 368899999999999999998765
No 111
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=26.86 E-value=64 Score=26.65 Aligned_cols=37 Identities=8% Similarity=0.110 Sum_probs=26.6
Q ss_pred eEEEE-eC-CCc-cChHHHHHHHHHHHhCCCEEEEEeCccc
Q 026707 15 HCLVL-SY-PAQ-GHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (234)
Q Consensus 15 hv~~~-p~-p~~-GH~~P~l~La~~La~~G~~VT~vt~~~~ 52 (234)
+|+++ ++ |.. |--.-...|++.|+++ |+|++++....
T Consensus 2 kI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 2 KLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp EEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 45554 32 333 5567788999999999 99999886543
No 112
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=26.47 E-value=69 Score=24.59 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=29.2
Q ss_pred CceEEEEeCCCccC-----hHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGH-----INPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..+|+++| +.|= -.++.+|++.|.++|.+|.|...+
T Consensus 45 A~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 45 ANSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp CSEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 45788888 5543 368899999999999999998765
No 113
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=25.55 E-value=74 Score=25.88 Aligned_cols=35 Identities=9% Similarity=0.086 Sum_probs=25.6
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCC-EEEEEeCc
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGL-KVTLVTTY 50 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~-~VT~vt~~ 50 (234)
+|+++.. ..++...+..|+++|.++|+ ++.++.+.
T Consensus 2 kIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~ 37 (384)
T 1vgv_A 2 KVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTA 37 (384)
T ss_dssp EEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcC
Confidence 5666642 34677888999999999994 88766543
No 114
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=25.27 E-value=1e+02 Score=23.73 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=23.3
Q ss_pred CCCceEEEEeCCCccC----hHHHHHHHHHHHhCCCEEEE
Q 026707 11 CKRVHCLVLSYPAQGH----INPLLQFAKRLEHKGLKVTL 46 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH----~~P~l~La~~La~~G~~VT~ 46 (234)
++...|.+|.-...+- ..-..+|++.|+++|+.|..
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVs 50 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVY 50 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEE
Confidence 3445688885444432 34456788888999977643
No 115
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=25.19 E-value=56 Score=25.54 Aligned_cols=21 Identities=29% Similarity=0.298 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCCEEEEEeCc
Q 026707 30 LLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 30 ~l~La~~La~~G~~VT~vt~~ 50 (234)
-..+|++|+++|++|+++..+
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 357889999999999998654
No 116
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=25.13 E-value=1.2e+02 Score=22.34 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=31.3
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..-+.+.-+++.|=..=+..|++.|..+|.+|.++...
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 34566777788899999999999999999999887754
No 117
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.94 E-value=53 Score=24.37 Aligned_cols=20 Identities=15% Similarity=0.282 Sum_probs=17.1
Q ss_pred HHHHHHHHhCCCEEEEEeCc
Q 026707 31 LQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 31 l~La~~La~~G~~VT~vt~~ 50 (234)
..++++|+++|++|+.++-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 14 SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHhCCCEEEEEEcC
Confidence 57899999999999988754
No 118
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=24.83 E-value=88 Score=28.18 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCcccccccccCCCCCCCCceEEecc
Q 026707 28 NPLLQFAKRLEHKGLKVTLVTTYFISKSLHRDSSSPSTSISLEAIS 73 (234)
Q Consensus 28 ~P~l~La~~La~~G~~VT~vt~~~~~~~~~~~~~~~~~~i~~~~l~ 73 (234)
.=++.+|+.|.+.|++ ++.|....+.+.. .+|.+..+.
T Consensus 16 ~~iv~lAk~L~~lGf~--I~ATgGTAk~L~e------~GI~v~~V~ 53 (593)
T 1g8m_A 16 AGLVEFARSLNALGLG--LIASGGTATALRD------AGLPVRDVS 53 (593)
T ss_dssp TTHHHHHHHHHHTTCE--EEECHHHHHHHHH------TTCCCEEHH
T ss_pred HhHHHHHHHHHHCCCE--EEEchHHHHHHHH------CCCeEEEee
Confidence 3478899999999987 5678777776654 356666554
No 119
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=24.73 E-value=1.1e+02 Score=24.64 Aligned_cols=39 Identities=21% Similarity=0.339 Sum_probs=28.4
Q ss_pred CCCceEEEEeCCCccChHHH--HHHHHHHHhCC-CEEEEEeCc
Q 026707 11 CKRVHCLVLSYPAQGHINPL--LQFAKRLEHKG-LKVTLVTTY 50 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~--l~La~~La~~G-~~VT~vt~~ 50 (234)
.++.+||++. ...+|-.+- ..|++.|.+.| ++|++..+.
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4577999994 333897553 56777777888 999998764
No 120
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=24.68 E-value=65 Score=26.35 Aligned_cols=42 Identities=21% Similarity=0.276 Sum_probs=25.2
Q ss_pred hHhhhcCCCceEEEEeCCCccChHHHHHHHHHHHhC-CCEEEEEeCc
Q 026707 5 EKKAASCKRVHCLVLSYPAQGHINPLLQFAKRLEHK-GLKVTLVTTY 50 (234)
Q Consensus 5 ~~~~~~~~~~hv~~~p~p~~GH~~P~l~La~~La~~-G~~VT~vt~~ 50 (234)
++.+.+....+|+++- +.|.+= .+|+++|+++ |++|+.+.-.
T Consensus 16 ~~~~~~m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 16 TQGPGSMKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -------CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred hcCCcccCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 4445445556777665 445443 5788999988 9999988754
No 121
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=24.55 E-value=44 Score=26.87 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=37.7
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHH--------HHhC-CCEEEEEeCccccccc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKR--------LEHK-GLKVTLVTTYFISKSL 56 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~--------La~~-G~~VT~vt~~~~~~~~ 56 (234)
.++.+|++...++-.|-....-++.. |..+ |++|..+-..-..+.+
T Consensus 118 ~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 118 GRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp CSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 35778999999999999999888877 8898 9999988776554443
No 122
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.48 E-value=1.2e+02 Score=20.77 Aligned_cols=44 Identities=11% Similarity=0.136 Sum_probs=26.5
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCc--cHHHHHHHc-----CCCceEecccch
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKF-----GLVGAAFLTQSC 147 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~--~~~~vA~~l-----giP~v~f~~~~a 147 (234)
..+.++.+.. .+||+||.|..++ -+.++.+++ ++|.+++.....
T Consensus 40 ~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 40 PLDALEALKG--TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHHHHTT--SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4455554432 4689999998764 234444443 578777655443
No 123
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=24.45 E-value=54 Score=24.88 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=23.3
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
..+|++.- +.|.+ -..++++|+++|++|+.+.-.
T Consensus 21 ~~~ilVtG--atG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVG--ANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEC--CCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 34555543 33433 357889999999999988754
No 124
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=24.43 E-value=1.4e+02 Score=21.81 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=25.2
Q ss_pred EEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 026707 16 CLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (234)
Q Consensus 16 v~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~ 49 (234)
++++-....|+-.-+..+++.|+++|+.|..+..
T Consensus 34 ~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 34 IVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 4444444557778899999999999998776654
No 125
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=24.43 E-value=81 Score=21.44 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=28.9
Q ss_pred CCceEEEEeCCCccChHH-HHHHHHHHHhCCCEEEEEe
Q 026707 12 KRVHCLVLSYPAQGHINP-LLQFAKRLEHKGLKVTLVT 48 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~~P-~l~La~~La~~G~~VT~vt 48 (234)
++.+|++++..|.|+-.- ...+-+.+.+.|+.+.+-+
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 456899999999999774 6777777888998865544
No 126
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=24.07 E-value=96 Score=26.88 Aligned_cols=25 Identities=20% Similarity=0.243 Sum_probs=19.8
Q ss_pred CccEEEeCCCCccHHHHHHHcCCCceEe
Q 026707 115 PVDCIVYDSFLPWALDVAKKFGLVGAAF 142 (234)
Q Consensus 115 ~~d~vI~D~~~~~~~~vA~~lgiP~v~f 142 (234)
+||++|... +...+|+++|||.+.+
T Consensus 375 ~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 375 QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 578998875 4678999999998854
No 127
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=24.01 E-value=66 Score=24.15 Aligned_cols=36 Identities=14% Similarity=0.309 Sum_probs=29.4
Q ss_pred CceEEEEeCCCccC-----hHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGH-----INPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH-----~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
...|+++| |.|= -.++.+|++.|.++|.+|.|...+
T Consensus 30 A~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 30 SHSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp CSEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 45788888 5542 368999999999999999998776
No 128
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.80 E-value=1.3e+02 Score=20.71 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=26.0
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHHc-------CCCceEecccc
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKF-------GLVGAAFLTQS 146 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 146 (234)
.++.++.+.. .+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 40 ~~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 40 GREAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 3455554432 46899999987642 44444432 57877766544
No 129
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=23.60 E-value=1.4e+02 Score=19.66 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=21.9
Q ss_pred CCccEEEeCCCCcc--HHHHHHHc-------CCCceEecccc
Q 026707 114 VPVDCIVYDSFLPW--ALDVAKKF-------GLVGAAFLTQS 146 (234)
Q Consensus 114 ~~~d~vI~D~~~~~--~~~vA~~l-------giP~v~f~~~~ 146 (234)
.++|+||.|..++- +.++.+++ ++|.+.+....
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 36899999987753 45555543 46777765544
No 130
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=23.60 E-value=1.1e+02 Score=21.63 Aligned_cols=39 Identities=10% Similarity=0.093 Sum_probs=23.1
Q ss_pred CCceEEEEeCCCccCh-HHHHHHHHHHHhCCCEEEEEeCc
Q 026707 12 KRVHCLVLSYPAQGHI-NPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~-~P~l~La~~La~~G~~VT~vt~~ 50 (234)
.++.|++++-.+.+.- .-...+++.|+++|++|..+.-.
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 3456888875544332 12223446788899988766543
No 131
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=23.58 E-value=1.7e+02 Score=21.60 Aligned_cols=44 Identities=5% Similarity=-0.090 Sum_probs=36.7
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccccc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFISK 54 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~~ 54 (234)
.....+++.-.||.|=..-...+++.+..+|..+.+++......
T Consensus 50 ~~~~~~ll~G~~G~GKT~la~~l~~~~~~~~~~~~~~~~~~~~~ 93 (242)
T 3bos_A 50 DGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIHAS 93 (242)
T ss_dssp CSCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEGGGGGG
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEHHHHHH
Confidence 35678889999999999999999999999999999888765443
No 132
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=23.35 E-value=55 Score=24.42 Aligned_cols=20 Identities=15% Similarity=0.144 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCEEEEEeCc
Q 026707 31 LQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 31 l~La~~La~~G~~VT~vt~~ 50 (234)
..++++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEec
Confidence 67899999999999988754
No 133
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=23.06 E-value=1e+02 Score=23.77 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=23.6
Q ss_pred CceEEEEeCCCccCh--HHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGHI--NPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~--~P~l~La~~La~~G~~VT~vt~~ 50 (234)
+.-+|++.-.+.||- .-+..+++.|+++|+.|-.+...
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 344667766666764 34788999999999988766544
No 134
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=22.93 E-value=1e+02 Score=24.60 Aligned_cols=37 Identities=11% Similarity=0.001 Sum_probs=30.0
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
.|++..-+|.|=..-...||..|+++|.+|-++=...
T Consensus 43 vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 43 VFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3445555667888999999999999999999887664
No 135
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=22.82 E-value=1e+02 Score=23.77 Aligned_cols=42 Identities=17% Similarity=0.056 Sum_probs=28.0
Q ss_pred HHHHHHHhhhCC-CCCccEEEeCCCCccHHHHHHHcCCCceEec
Q 026707 101 SLCELVENMNGS-GVPVDCIVYDSFLPWALDVAKKFGLVGAAFL 143 (234)
Q Consensus 101 ~l~~ll~~l~~~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~f~ 143 (234)
.++++++..... ...+.+||++-- .-+...|+++|||.+.+.
T Consensus 25 nl~all~~~~~~~~~eI~~Vis~~~-a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 25 LLRSLLDAAVGDYPARVVAVGVDRE-CRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp HHHHHHHHSSTTCSEEEEEEEESSC-CHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHhccCCCeEEEEEeCCc-hHHHHHHHHcCCCEEEeC
Confidence 455555554221 114678999874 335688999999999884
No 136
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=22.82 E-value=94 Score=20.74 Aligned_cols=44 Identities=16% Similarity=0.007 Sum_probs=26.4
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCc---cHHHHHHH----cCCCceEecccch
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLP---WALDVAKK----FGLVGAAFLTQSC 147 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~---~~~~vA~~----lgiP~v~f~~~~a 147 (234)
..+.++.+.. .+||+||.|..++ .+.++.++ -++|.+++.....
T Consensus 43 ~~~a~~~~~~--~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 43 GEEAVRCAPD--LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HHHHHHHHHH--HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHHHh--CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 3444444332 3589999998663 24444444 3788888765543
No 137
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=22.67 E-value=1.1e+02 Score=26.63 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=33.2
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCcccc
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFIS 53 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~~ 53 (234)
-|+++-.+|.|=..-...||..|+++|.+|.++..+...
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 455777788899999999999999999999999877543
No 138
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=22.64 E-value=1.7e+02 Score=22.82 Aligned_cols=50 Identities=10% Similarity=0.144 Sum_probs=24.3
Q ss_pred CcchhHhh--hcCCCceEEEEeC-----CCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 1 MENIEKKA--ASCKRVHCLVLSY-----PAQGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 1 ~~~~~~~~--~~~~~~hv~~~p~-----p~~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
|-+||.+- ......+|+++-. ++. -..=+......|.+.|++|+++++..
T Consensus 9 ~~~~~~~~~~~~~M~kkV~ill~~~~~~dG~-e~~E~~~p~~vL~~aG~~V~~~S~~~ 65 (242)
T 3l3b_A 9 MGTLEAQTQGPGSMALNSAVILAGCGHMDGS-EIREAVLVMLELDRHNVNFKCFAPNK 65 (242)
T ss_dssp ---------------CEEEEECCCSSTTTSC-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred chhhhhhhcccccccCEEEEEEecCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 55677643 2222357776654 443 22334444567777899999999864
No 139
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=22.59 E-value=75 Score=25.55 Aligned_cols=43 Identities=14% Similarity=0.165 Sum_probs=36.8
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhC--CCEEEEEeCcccccccc
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHK--GLKVTLVTTYFISKSLH 57 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~--G~~VT~vt~~~~~~~~~ 57 (234)
+|+++-.-+.|-+.-...+.+.|.++ +.+||+++.+.+.+.+.
T Consensus 2 ~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 2 RVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred eEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 68889888889999999999999886 89999999987765543
No 140
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=22.49 E-value=1.2e+02 Score=20.37 Aligned_cols=32 Identities=9% Similarity=0.214 Sum_probs=21.0
Q ss_pred CCccEEEeCCCCc--cHHHHHHHc-------CCCceEeccc
Q 026707 114 VPVDCIVYDSFLP--WALDVAKKF-------GLVGAAFLTQ 145 (234)
Q Consensus 114 ~~~d~vI~D~~~~--~~~~vA~~l-------giP~v~f~~~ 145 (234)
.+||+||.|..++ .+.++.+++ ++|.+.+...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 3689999998775 244555443 4677776544
No 141
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=22.48 E-value=1.5e+02 Score=18.81 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=19.9
Q ss_pred CCccEEEeCCCCc--cHHHHHHHc-----CCCceEecc
Q 026707 114 VPVDCIVYDSFLP--WALDVAKKF-----GLVGAAFLT 144 (234)
Q Consensus 114 ~~~d~vI~D~~~~--~~~~vA~~l-----giP~v~f~~ 144 (234)
.+||+||.|..++ .+.++.+++ ++|.+.+..
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 3689999998765 344444443 467666644
No 142
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=22.47 E-value=1.5e+02 Score=19.36 Aligned_cols=43 Identities=14% Similarity=0.085 Sum_probs=24.7
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCcc---HHHHHHHc-----CCCceEeccc
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLPW---ALDVAKKF-----GLVGAAFLTQ 145 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~~---~~~vA~~l-----giP~v~f~~~ 145 (234)
.++.++.+... .+||+||.|..++- +.++.+++ ++|.+++...
T Consensus 38 ~~~a~~~l~~~-~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 38 GAKAIEMLKSG-AAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHHHTT-CCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHHHcC-CCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 34444444321 26899999987642 34444443 5777776543
No 143
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=22.10 E-value=62 Score=25.80 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=26.0
Q ss_pred ceEEEEeCCCccChH-HHHHHHHHHHhCCCEEEEEeCc
Q 026707 14 VHCLVLSYPAQGHIN-PLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~VT~vt~~ 50 (234)
.+|+++.-|+- == =-+..||.|+.+|++|+++...
T Consensus 86 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEec
Confidence 48999885443 21 1378899999999999998654
No 144
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=22.00 E-value=62 Score=23.60 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=22.2
Q ss_pred eEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 15 HCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 15 hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
+|+++- +.|-+ -..++++|+++|++|+.++-.
T Consensus 5 ~ilVtG--atG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 5 KIAIFG--ATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp EEEEES--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEc--CCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 455543 43433 467889999999999988654
No 145
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=21.97 E-value=65 Score=26.61 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 27 INPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 27 ~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
+-+|.+|.+.|.++|++|.++|...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4679999999999999999988753
No 146
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=21.89 E-value=1.6e+02 Score=24.03 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=31.8
Q ss_pred ceEEEE-eCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 026707 14 VHCLVL-SYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (234)
Q Consensus 14 ~hv~~~-p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~ 52 (234)
..|+++ .-+|.|=..-...||..|+++|.+|-++.++..
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 445544 446779999999999999999999999988754
No 147
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=21.82 E-value=1.5e+02 Score=22.39 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=21.8
Q ss_pred hhhcCCCceEEEEeCCCccCh----HHHHHHHHHHHhCCCEEE
Q 026707 7 KAASCKRVHCLVLSYPAQGHI----NPLLQFAKRLEHKGLKVT 45 (234)
Q Consensus 7 ~~~~~~~~hv~~~p~p~~GH~----~P~l~La~~La~~G~~VT 45 (234)
++....+..|.+|.... +.- .-..+|++.|+++|+.|.
T Consensus 7 ~~~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv 48 (189)
T 3sbx_A 7 KSDEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLV 48 (189)
T ss_dssp ------CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEE
Confidence 34444556788887554 433 445677788888998643
No 148
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=21.72 E-value=1.2e+02 Score=26.15 Aligned_cols=48 Identities=19% Similarity=0.206 Sum_probs=30.5
Q ss_pred chhHhhhcCCCceEE--EEeCCC--c-cChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 3 NIEKKAASCKRVHCL--VLSYPA--Q-GHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 3 ~~~~~~~~~~~~hv~--~~p~p~--~-GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
.|+.++...++.+|. +=|... . ||+.|+. ..+.|.+.||++.++....
T Consensus 27 ~L~~~L~~~~~~~vy~G~dPTg~sLHlGh~v~l~-~l~~lQ~~G~~~i~lIgD~ 79 (432)
T 1h3f_A 27 ELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLR-KMRQFQELGHKVVLIIGDF 79 (432)
T ss_dssp HHHHHHHTCSCCEEEEEECTTCCSCBHHHHHHHH-HHHHHHHTTCEEEEEECCC
T ss_pred HHHHHHhcCCCcEEEEcccCCCCCCchhhHHHHH-HHHHHHHCCCCEEEEEccc
Confidence 455666333444544 556632 2 9999754 4566778899999887763
No 149
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=21.62 E-value=63 Score=27.57 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=24.2
Q ss_pred EEeCCC---ccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 18 VLSYPA---QGHINPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 18 ~~p~p~---~GH~~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
+=|..- -||+.|++.+. .|.+.||++.++....
T Consensus 71 ~dPTg~sLHlGhlv~l~~l~-~lQ~~G~~~~~lIgD~ 106 (392)
T 1y42_X 71 IDPTAPSLHVGHLLPLMPLF-WMYLEGYKAFTLIGGS 106 (392)
T ss_dssp ECCCSSSCBGGGHHHHHHHH-HHHHHTCEEEEEECTT
T ss_pred ecCCCCCccHHHHHHHHHHH-HHHHcCCcEEEEEcCc
Confidence 555533 29999877765 7778899998887653
No 150
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=21.60 E-value=1.7e+02 Score=18.95 Aligned_cols=43 Identities=9% Similarity=0.146 Sum_probs=26.0
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCc--cHHHHHHHc-----CCCceEecccc
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLP--WALDVAKKF-----GLVGAAFLTQS 146 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~--~~~~vA~~l-----giP~v~f~~~~ 146 (234)
.++.++.+.. .+||+||.|..++ -+.++.+++ ++|.+.+....
T Consensus 36 ~~~~~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 36 AEAFLAFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp HHHHHHHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred HHHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3444544432 4689999998765 244555443 57877765544
No 151
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=21.41 E-value=59 Score=26.74 Aligned_cols=17 Identities=35% Similarity=0.513 Sum_probs=15.4
Q ss_pred HHHHHHHHhCCCEEEEE
Q 026707 31 LQFAKRLEHKGLKVTLV 47 (234)
Q Consensus 31 l~La~~La~~G~~VT~v 47 (234)
+-+|..|+++|++|+++
T Consensus 14 l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 14 TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCCCEEEE
Confidence 67888999999999998
No 152
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=21.40 E-value=1.8e+02 Score=19.14 Aligned_cols=34 Identities=12% Similarity=0.006 Sum_probs=21.5
Q ss_pred CCccEEEeCCCCc-------cHHHHHHHc-----CCCceEecccch
Q 026707 114 VPVDCIVYDSFLP-------WALDVAKKF-----GLVGAAFLTQSC 147 (234)
Q Consensus 114 ~~~d~vI~D~~~~-------~~~~vA~~l-----giP~v~f~~~~a 147 (234)
.++|+||.|.-++ .+.++.+++ ++|.+++.....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 3689999998654 234444332 588887755443
No 153
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=21.40 E-value=1.3e+02 Score=22.97 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=34.7
Q ss_pred CCCceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 026707 11 CKRVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (234)
Q Consensus 11 ~~~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~ 52 (234)
.+...+++...++.|=..-...|+..|+ +|.+|.++.....
T Consensus 12 ~~~~i~~~~GkgGvGKTTl~~~La~~l~-~g~~v~vvd~D~~ 52 (262)
T 1yrb_A 12 MASMIVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVNLDTG 52 (262)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEECCSS
T ss_pred cceEEEEEeCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 3445677888899999999999999999 9999999987653
No 154
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=21.29 E-value=1.1e+02 Score=25.91 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=21.7
Q ss_pred CceEEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 13 RVHCLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
++++++| |-||+- ..|++.++..|++||++-+.
T Consensus 204 ~~rL~If---GAGhva--~ala~~a~~lg~~V~v~D~R 236 (386)
T 2we8_A 204 RPRMLVF---GAIDFA--AAVAQQGAFLGYRVTVCDAR 236 (386)
T ss_dssp CCEEEEE---CCSTHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE---CCCHHH--HHHHHHHHhCCCEEEEECCc
Confidence 4455554 678884 34555556679999998553
No 155
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=21.27 E-value=87 Score=26.95 Aligned_cols=46 Identities=17% Similarity=0.265 Sum_probs=29.6
Q ss_pred chhHhhhcCCCceEE--EEeCCC---ccChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 3 NIEKKAASCKRVHCL--VLSYPA---QGHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 3 ~~~~~~~~~~~~hv~--~~p~p~---~GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
.|+.++. .++..+. +=|..- -||+.|++.+ +.|.+.||++.++...
T Consensus 21 ~L~~~L~-~~~~~iy~G~dPTg~sLHlGh~v~l~~l-~~lQ~~G~~~i~lIgd 71 (419)
T 2ts1_A 21 GLRKLLN-EERVTLYCGFDPTADSLHIGHLATILTM-RRFQQAGHRPIALVGG 71 (419)
T ss_dssp HHHHHHH-HSCCEEEEEECCSSSSCBGGGHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred HHHHHHc-CCCCEEEEeeCCCCCCccHHHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 3555553 2333333 556533 2999987766 5888899999888765
No 156
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A*
Probab=21.13 E-value=1.6e+02 Score=24.76 Aligned_cols=46 Identities=13% Similarity=0.200 Sum_probs=30.7
Q ss_pred chhHhhhcCCCceEE--EEeCCCc--cChHHHHHHHHHHHhCCCEEEEEeCc
Q 026707 3 NIEKKAASCKRVHCL--VLSYPAQ--GHINPLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 3 ~~~~~~~~~~~~hv~--~~p~p~~--GH~~P~l~La~~La~~G~~VT~vt~~ 50 (234)
.|+..+.. ++.+|. +=|.... ||+.|++.+...+ +.||++.++...
T Consensus 26 ~L~~~L~~-~~~~vy~G~~PTG~lHlG~~~~~l~~~~~~-q~g~~~i~~I~D 75 (372)
T 1n3l_A 26 KLKEILKE-RELKIYWGTATTGKPHVAYFVPMSKIADFL-KAGCEVTILFAD 75 (372)
T ss_dssp HHHHHHTT-SCCEEEEEECCSSCCBGGGHHHHHHHHHHH-HTTCEEEEEECH
T ss_pred HHHHHHhc-CCCEEEeCcCCCCcccHHHHHHHHHHHHHH-HCCCCEEEEEcC
Confidence 45666643 444443 5565433 9999999966655 589999888776
No 157
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=21.13 E-value=52 Score=26.84 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCEEEEEe
Q 026707 31 LQFAKRLEHKGLKVTLVT 48 (234)
Q Consensus 31 l~La~~La~~G~~VT~vt 48 (234)
+-+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 567899999999999983
No 158
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=21.11 E-value=1.3e+02 Score=20.13 Aligned_cols=33 Identities=12% Similarity=0.304 Sum_probs=21.4
Q ss_pred CCccEEEeCCCCc--cHHHHHHHc-----CCCceEecccc
Q 026707 114 VPVDCIVYDSFLP--WALDVAKKF-----GLVGAAFLTQS 146 (234)
Q Consensus 114 ~~~d~vI~D~~~~--~~~~vA~~l-----giP~v~f~~~~ 146 (234)
.+||+||.|..++ -+.++.+++ ++|.+++....
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4789999998764 244444443 57777765543
No 159
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=21.06 E-value=1.8e+02 Score=19.35 Aligned_cols=42 Identities=24% Similarity=0.081 Sum_probs=24.1
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCc---cHHHHHHH----cCCCceEecc
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLP---WALDVAKK----FGLVGAAFLT 144 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~---~~~~vA~~----lgiP~v~f~~ 144 (234)
..+.++.+.. ..+||+||.|..++ -+.++.++ -++|.+++..
T Consensus 38 ~~~a~~~l~~-~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~ 86 (140)
T 3h5i_A 38 GEAAVEKVSG-GWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTA 86 (140)
T ss_dssp HHHHHHHHHT-TCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEES
T ss_pred hHHHHHHHhc-CCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEEC
Confidence 3444444432 14689999998763 23444443 3677776543
No 160
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=21.05 E-value=57 Score=25.78 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=25.9
Q ss_pred ceEEEEeCCCccChH-HHHHHHHHHHhCCCEEEEEeCc
Q 026707 14 VHCLVLSYPAQGHIN-PLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~VT~vt~~ 50 (234)
.+|+++.-|+- == =-+..||.|+++|++|+++...
T Consensus 59 ~~v~VlcG~GN--NGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGPGN--NGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 58999885543 21 1378899999999999997653
No 161
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=20.99 E-value=1.8e+02 Score=21.16 Aligned_cols=33 Identities=9% Similarity=0.011 Sum_probs=24.2
Q ss_pred EEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 026707 16 CLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (234)
Q Consensus 16 v~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~ 49 (234)
|+++. ...|.-.-+..+++.|+++|+.|..+.-
T Consensus 31 vv~~h-G~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 31 IVIAQ-DIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEC-CTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred EEEEc-CCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 44444 4556677889999999999998766544
No 162
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=20.92 E-value=1.5e+02 Score=24.37 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=32.5
Q ss_pred CceEEEEe-CCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 026707 13 RVHCLVLS-YPAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (234)
Q Consensus 13 ~~hv~~~p-~p~~GH~~P~l~La~~La~~G~~VT~vt~~~~ 52 (234)
..+|+++. -+|.|=..-...||..|+++|.+|-++.++..
T Consensus 15 ~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 15 SLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 34555554 46779999999999999999999999999843
No 163
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=20.86 E-value=1.5e+02 Score=19.24 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=19.4
Q ss_pred HHHHHhhhCCCCCccEEEeCCCCc--cHHHHHHHc
Q 026707 103 CELVENMNGSGVPVDCIVYDSFLP--WALDVAKKF 135 (234)
Q Consensus 103 ~~ll~~l~~~~~~~d~vI~D~~~~--~~~~vA~~l 135 (234)
++.++.+.. .+||+||.|..++ .+.++.+++
T Consensus 41 ~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l 73 (129)
T 1p6q_A 41 EQGMKIMAQ--NPHHLVISDFNMPKMDGLGLLQAV 73 (129)
T ss_dssp HHHHHHHHT--SCCSEEEECSSSCSSCHHHHHHHH
T ss_pred HHHHHHHHc--CCCCEEEEeCCCCCCCHHHHHHHH
Confidence 444444432 4689999998775 355666654
No 164
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.62 E-value=1.5e+02 Score=23.44 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=32.7
Q ss_pred CCceEEEEeC--CCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 026707 12 KRVHCLVLSY--PAQGHINPLLQFAKRLEHKGLKVTLVTTYFI 52 (234)
Q Consensus 12 ~~~hv~~~p~--p~~GH~~P~l~La~~La~~G~~VT~vt~~~~ 52 (234)
++.+++++.. ++.|=..-...||..|++.|.+|-++-....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3456665543 6779899999999999999999999877644
No 165
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=20.41 E-value=1.2e+02 Score=25.47 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=21.5
Q ss_pred CceEEEEeCCCccCh-HHHHHHHHHHHhCCCEEEEEeCcc
Q 026707 13 RVHCLVLSYPAQGHI-NPLLQFAKRLEHKGLKVTLVTTYF 51 (234)
Q Consensus 13 ~~hv~~~p~p~~GH~-~P~l~La~~La~~G~~VT~vt~~~ 51 (234)
++++++| |.||+ .++.++++ ..|++||++-+..
T Consensus 199 ~~~L~I~---GaGhva~aLa~la~---~lgf~V~v~D~R~ 232 (362)
T 3on5_A 199 KERLIIF---GAGPDVPPLVTFAS---NVGFYTVVTDWRP 232 (362)
T ss_dssp CEEEEEE---CCSTTHHHHHHHHH---HHTEEEEEEESCG
T ss_pred CCEEEEE---CCCHHHHHHHHHHH---HCCCeEEEECCCc
Confidence 4455554 78898 34444444 4599999987653
No 166
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.40 E-value=1.4e+02 Score=20.00 Aligned_cols=43 Identities=12% Similarity=0.071 Sum_probs=25.6
Q ss_pred HHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHHc-----CCCceEecccch
Q 026707 102 LCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKF-----GLVGAAFLTQSC 147 (234)
Q Consensus 102 l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~a 147 (234)
..+.++.+.. .+||+||.|. ++. +.++.+++ ++|.+++.....
T Consensus 37 ~~~a~~~l~~--~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (142)
T 2qxy_A 37 EQEAFTFLRR--EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVD 86 (142)
T ss_dssp HHHHHHHHTT--SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCC
T ss_pred HHHHHHHHhc--cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCC
Confidence 3445554432 4689999999 653 33444433 588887765443
No 167
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=20.36 E-value=69 Score=26.25 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=26.2
Q ss_pred ceEEEEeCCCccChH-HHHHHHHHHHhCCCEEEEEeCc
Q 026707 14 VHCLVLSYPAQGHIN-PLLQFAKRLEHKGLKVTLVTTY 50 (234)
Q Consensus 14 ~hv~~~p~p~~GH~~-P~l~La~~La~~G~~VT~vt~~ 50 (234)
.+|+++.-||- == =-+..||.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GN--NGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHV--KGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSH--HHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCC--CHHHHHHHHHHHHHCCCcEEEEEec
Confidence 58999885543 21 1378899999999999998654
No 168
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=20.25 E-value=1.5e+02 Score=19.90 Aligned_cols=30 Identities=10% Similarity=0.172 Sum_probs=19.2
Q ss_pred CCccEEEeCCCCc--cHHHHHHHc-----CCCceEec
Q 026707 114 VPVDCIVYDSFLP--WALDVAKKF-----GLVGAAFL 143 (234)
Q Consensus 114 ~~~d~vI~D~~~~--~~~~vA~~l-----giP~v~f~ 143 (234)
.+||+||.|.-++ -+.++.+++ ++|.+.+.
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls 84 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMS 84 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEe
Confidence 4689999998765 244555443 46666553
No 169
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=20.07 E-value=1.7e+02 Score=21.82 Aligned_cols=34 Identities=15% Similarity=0.366 Sum_probs=22.0
Q ss_pred EEEEeCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 026707 16 CLVLSYPAQGHINPLLQFAKRLEHKGLKVTLVTT 49 (234)
Q Consensus 16 v~~~p~p~~GH~~P~l~La~~La~~G~~VT~vt~ 49 (234)
|+++.-+...+-.....+++.+.+.|++|.++..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 3444444444566677788888888888776554
No 170
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=20.06 E-value=1.5e+02 Score=20.53 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=23.9
Q ss_pred CCceEEEEeCCCccCh-HHHHHHHHHHHhCCCEEEEEe
Q 026707 12 KRVHCLVLSYPAQGHI-NPLLQFAKRLEHKGLKVTLVT 48 (234)
Q Consensus 12 ~~~hv~~~p~p~~GH~-~P~l~La~~La~~G~~VT~vt 48 (234)
+++-|+++.-.+.+.. .-+..+++.|+++|+.|..+.
T Consensus 3 ~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 3 SRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp SSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 4556777765443322 245689999999998765443
No 171
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=20.02 E-value=1.9e+02 Score=18.85 Aligned_cols=44 Identities=14% Similarity=0.195 Sum_probs=24.6
Q ss_pred HHHHHHHhhhCCCCCccEEEeCCCCcc--HHHHHHHc-----CCCceEecccc
Q 026707 101 SLCELVENMNGSGVPVDCIVYDSFLPW--ALDVAKKF-----GLVGAAFLTQS 146 (234)
Q Consensus 101 ~l~~ll~~l~~~~~~~d~vI~D~~~~~--~~~vA~~l-----giP~v~f~~~~ 146 (234)
..++.++.+.. .+||+||.|..++- +.++.+++ ++|.+++....
T Consensus 39 ~~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 39 DGVDALELLGG--FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp CHHHHHHHHTT--CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred CHHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 34455555432 46899999987642 23444332 47877765544
Done!