BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026712
(234 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438783|ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Vitis vinifera]
Length = 246
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/214 (71%), Positives = 167/214 (78%), Gaps = 9/214 (4%)
Query: 23 SVPHLQLPITV--------ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYT 74
S PH Q+P T+ S + R + R A A G + NSVP +NG YT
Sbjct: 29 SFPH-QMPCTLLFQPGRKPPVGSTVGSRSERISGIRRSPALAAAGTLMANSVPSKNGVYT 87
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VGDFMT+KEDLH VK TTTV+EALE LVE RITGFPVIDDDWKLVG+VSDYDLLALDSIS
Sbjct: 88 VGDFMTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSIS 147
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
GG DT +FP V+STWKTFNELQ+LLSKTNGKVVGDLMTPAP+VV E TNLEDAARLLL
Sbjct: 148 GGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLL 207
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
ETKYRRLPVVD GKLVG+ITRGNVVRAALQIKR
Sbjct: 208 ETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 241
>gi|449445894|ref|XP_004140707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
gi|449486597|ref|XP_004157343.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 239
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/241 (65%), Positives = 184/241 (76%), Gaps = 9/241 (3%)
Query: 1 MSSISIPSCLTLARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKA------ 54
MSSIS+ + LAR + + +S + + + LSK L F +S A
Sbjct: 1 MSSISLSNSHPLARPYPHHLPHSHRQQWCSRPLLSTNSLSK-LHRFGISDRFPARPPLPL 59
Query: 55 -FAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVID 113
A +G G+ +S P R GTYTVGDFMT+KE+L+ VK TTTVDEALE LVEKRITGFPV+D
Sbjct: 60 VLASSGAGVVDSFPLR-GTYTVGDFMTRKENLYVVKPTTTVDEALEVLVEKRITGFPVVD 118
Query: 114 DDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLM 173
DDW LVGVVSDYDLLALDSISGG Q+DT+LFP+V+S+WKTFNE+Q+LL KTNGKVVGDLM
Sbjct: 119 DDWNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLCKTNGKVVGDLM 178
Query: 174 TPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
T +PL V E +NLEDAARLLLETKYRRLPVVD GKLVG+ITRGNVVRAALQIKR ERS
Sbjct: 179 TSSPLAVRETSNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAALQIKRAAERS 238
Query: 234 T 234
T
Sbjct: 239 T 239
>gi|224056130|ref|XP_002298732.1| predicted protein [Populus trichocarpa]
gi|222845990|gb|EEE83537.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 148/201 (73%), Positives = 163/201 (81%), Gaps = 2/201 (0%)
Query: 35 TPSHLSKRLRFFTVSREV--KAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTT 92
TP RLR +V R + A + NSVP R+G YTVGDFMTKKE L+ VK T
Sbjct: 35 TPRSKCCRLRSSSVPRSPYRSSVAVALSTVANSVPARSGIYTVGDFMTKKEGLYVVKANT 94
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TVDEALE LVEKRITGFPVIDDDW+LVGVVSDYDLLALDSISGG QNDT+LFPNV+S+WK
Sbjct: 95 TVDEALEALVEKRITGFPVIDDDWRLVGVVSDYDLLALDSISGGCQNDTNLFPNVDSSWK 154
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
TFNELQ+LL K NGK+VGDLMTP PLVV+E TNLEDA RLLLETKYRRLPVVD GKLVG
Sbjct: 155 TFNELQKLLIKNNGKLVGDLMTPNPLVVYETTNLEDAVRLLLETKYRRLPVVDDDGKLVG 214
Query: 213 LITRGNVVRAALQIKRDGERS 233
+ITRG++VRAALQIK ERS
Sbjct: 215 IITRGDIVRAALQIKNATERS 235
>gi|296082380|emb|CBI21385.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/167 (84%), Positives = 151/167 (90%)
Query: 62 ITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGV 121
+ NSVP +NG YTVGDFMT+KEDLH VK TTTV+EALE LVE RITGFPVIDDDWKLVG+
Sbjct: 1 MANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGL 60
Query: 122 VSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVH 181
VSDYDLLALDSISGG DT +FP V+STWKTFNELQ+LLSKTNGKVVGDLMTPAP+VV
Sbjct: 61 VSDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVR 120
Query: 182 ENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
E TNLEDAARLLLETKYRRLPVVD GKLVG+ITRGNVVRAALQIKR
Sbjct: 121 ETTNLEDAARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 167
>gi|255587643|ref|XP_002534340.1| conserved hypothetical protein [Ricinus communis]
gi|223525462|gb|EEF28042.1| conserved hypothetical protein [Ricinus communis]
Length = 239
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/225 (67%), Positives = 177/225 (78%), Gaps = 7/225 (3%)
Query: 10 LTLARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTV---SREVKAFAHNGVGITNSV 66
LT R A+ + S H QLP +++ + +S+RL +V R + G + NS
Sbjct: 16 LTRLRSTASPTVVSFAH-QLPCLLSSAT-VSRRLFHLSVISWPRRSSTISATGTLMANS- 72
Query: 67 PPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
P++G YTVGDFMT+KEDL VK TTTVDEAL+ LVE RITGFPVIDDDWKLVG+VSDYD
Sbjct: 73 -PKSGVYTVGDFMTRKEDLCVVKPTTTVDEALQTLVEHRITGFPVIDDDWKLVGLVSDYD 131
Query: 127 LLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNL 186
LLALDSISGG + D S+FP V+STWKTFNE+Q+LLSKTNGK+VGDLMTPAP+VV E TNL
Sbjct: 132 LLALDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGKLVGDLMTPAPVVVRETTNL 191
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
EDAARLLLETKYRRLPVVD GKLVG+ITRGNVVRAAL+IKRD E
Sbjct: 192 EDAARLLLETKYRRLPVVDAEGKLVGIITRGNVVRAALEIKRDME 236
>gi|357482805|ref|XP_003611689.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
gi|355513024|gb|AES94647.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
Length = 224
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/187 (75%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Query: 46 FTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKR 105
F+ R FA N + NSVPP+NG YTVGDFMTKK++LH VK TTTVDEAL+ LVE R
Sbjct: 37 FSKLRGSPLFAANTL-TANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHR 95
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN 165
ITGFPVIDD+WKLVGVVSDYDLLALDSISG Q D SLFP+V+STWKTFNE+QRLLSKTN
Sbjct: 96 ITGFPVIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLLSKTN 155
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
GKV+G+LMT AP+VV E TNLEDAARLLLETK+RRLPVVD G+LVG+ITRGNVVRAALQ
Sbjct: 156 GKVIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQ 215
Query: 226 IKRDGER 232
+KRD ++
Sbjct: 216 MKRDSQK 222
>gi|217075546|gb|ACJ86133.1| unknown [Medicago truncatula]
gi|388495112|gb|AFK35622.1| unknown [Medicago truncatula]
Length = 224
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/187 (75%), Positives = 160/187 (85%), Gaps = 1/187 (0%)
Query: 46 FTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKR 105
F+ R FA N + NSVPP+NG YTVGDFMTKK++LH VK TTTVDEAL+ LVE R
Sbjct: 37 FSKLRGSPLFAANTL-TANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHR 95
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN 165
ITGFPVIDD+WKLVGVVSDYDLLALDSISG Q D SLFP+V+STWKTFNE+QRL SKTN
Sbjct: 96 ITGFPVIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLQSKTN 155
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
GKV+G+LMT AP+VV E TNLEDAARLLLETK+RRLPVVD G+LVG+ITRGNVVRAALQ
Sbjct: 156 GKVIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALQ 215
Query: 226 IKRDGER 232
+KRD ++
Sbjct: 216 MKRDSQK 222
>gi|15234564|ref|NP_195409.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75219197|sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;
AltName: Full=CBS domain-containing protein 2;
Short=AtCDCP2; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 2; Short=AtLEJ2; Flags:
Precursor
gi|4006881|emb|CAB16799.1| putative protein [Arabidopsis thaliana]
gi|7270640|emb|CAB80357.1| putative protein [Arabidopsis thaliana]
gi|21537376|gb|AAM61717.1| unknown [Arabidopsis thaliana]
gi|28392900|gb|AAO41886.1| unknown protein [Arabidopsis thaliana]
gi|28827758|gb|AAO50723.1| unknown protein [Arabidopsis thaliana]
gi|332661316|gb|AEE86716.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 236
Score = 285 bits (730), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 137/171 (80%), Positives = 153/171 (89%)
Query: 62 ITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGV 121
+TNS PR+G YTVG+FMTKKEDLH VK TTTVDEALE LVE RITGFPVID+DWKLVG+
Sbjct: 64 MTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGL 123
Query: 122 VSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVH 181
VSDYDLLALDSISG + + S+FP V+STWKTFN +Q+LLSKTNGK+VGDLMTPAPLVV
Sbjct: 124 VSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVE 183
Query: 182 ENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
E TNLEDAA++LLETKYRRLPVVD GKLVG+ITRGNVVRAALQIKR G+R
Sbjct: 184 EKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDR 234
>gi|297802578|ref|XP_002869173.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
gi|297315009|gb|EFH45432.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/240 (62%), Positives = 186/240 (77%), Gaps = 9/240 (3%)
Query: 1 MSSISIPSCLTLARLNANGVINSVPH-LQLPITVAT----PSHLSKRLRFFTVSREVKAF 55
M SIS+ L + RL ++ S+ H LPI+ ++ P +R F+ S V AF
Sbjct: 1 MGSISLSYSLPITRL---PLLTSLNHQCFLPISSSSFPLLPLSNRRRSSTFSPSIAVSAF 57
Query: 56 AHNGVGITN-SVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD 114
+ N SVP +NG YTVGDFMT +++LH VK +T+VD+ALE LVEK++TG PVIDD
Sbjct: 58 FAAPASVNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD 117
Query: 115 DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMT 174
+W LVGVVSDYDLLALDSISG +QNDT+LFP+V+STWKTFNELQ+L+SKT GKVVGDLMT
Sbjct: 118 NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMT 177
Query: 175 PAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
P+PLVV ++TNLEDAARLLLETK+RRLPVVD GKL+G++TRGNVVRAALQIKR+ E ST
Sbjct: 178 PSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRETENST 237
>gi|317106695|dbj|BAJ53196.1| JHL03K20.5 [Jatropha curcas]
Length = 236
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 165/205 (80%), Gaps = 3/205 (1%)
Query: 28 QLPITVAT-PSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLH 86
QLP +++ P L + R A A +G + +S P++G YTVGDFMT+KEDL
Sbjct: 31 QLPCLLSSRPGRRLLPLSAISHPRRSSAIAASGAFVASS--PKSGVYTVGDFMTRKEDLQ 88
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
VK TTTVDEAL+ LVE RITGFPVIDDDWKLVG+VSDYDLLALDSISGG + D S+FP
Sbjct: 89 VVKPTTTVDEALQTLVEHRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGRTDNSMFPE 148
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
V+STWKTFNE+Q+LLSKTNGK+VGDLMTPAP+VV E TNLEDAARLLLETKYRRLPVVD
Sbjct: 149 VDSTWKTFNEVQKLLSKTNGKLVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDS 208
Query: 207 YGKLVGLITRGNVVRAALQIKRDGE 231
GKLVG+ITRGNVVRAAL+IKR E
Sbjct: 209 EGKLVGIITRGNVVRAALEIKRSIE 233
>gi|225428867|ref|XP_002285148.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Vitis vinifera]
gi|297741249|emb|CBI32380.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/177 (77%), Positives = 157/177 (88%), Gaps = 1/177 (0%)
Query: 56 AHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD 115
AH + TNSVP RNGTY VGDFMTKKE LH VK TT VDEALE LVEK+ITGFPVID+D
Sbjct: 53 AHAAI-TTNSVPHRNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKITGFPVIDED 111
Query: 116 WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTP 175
WKLVG+VSDYDLLALDSISGG Q DT+LFP+V+S+WK FN++Q+LL+KT GKVVGD+MTP
Sbjct: 112 WKLVGLVSDYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGKVVGDVMTP 171
Query: 176 APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
AP+VVHE TNLEDAARLLLETKYRRLPVVDG GKLVG++TRG+VVRAAL+IK E+
Sbjct: 172 APVVVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRAALKIKGTREK 228
>gi|297802232|ref|XP_002869000.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
gi|297314836|gb|EFH45259.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/231 (64%), Positives = 173/231 (74%), Gaps = 6/231 (2%)
Query: 5 SIPSCLTLARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGVGIT- 63
S+P L+ RL A+ +S L P H R F + + A + G T
Sbjct: 7 SVP--LSFTRLRASSSPSSPYLLPPRFLSVQPCHKFNFSRSFPSKSRIPS-ASSAAGSTL 63
Query: 64 --NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGV 121
NS PR+G YTVG+FMTKK+DLH VK TTTVDEALE LVE RITGFPVID+DWKLVG+
Sbjct: 64 MKNSSSPRSGVYTVGEFMTKKDDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGL 123
Query: 122 VSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVH 181
VSDYDLLALDSISG + + S+FP V+STWKTFN +Q+LLSKTNGK+VGDLMTPAPLVV
Sbjct: 124 VSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVE 183
Query: 182 ENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
E TNLEDAA++LLETKYRRLPVVD GKLVG+ITRGNVVRAALQIKR G+R
Sbjct: 184 EKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDR 234
>gi|449443418|ref|XP_004139474.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/186 (75%), Positives = 156/186 (83%)
Query: 46 FTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKR 105
F R+ + A +G + NSVP G Y VGDFMT+KE+LH VK TT+VDEALE LVEKR
Sbjct: 47 FPELRKSTSIAASGTLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKR 106
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN 165
ITGFPVIDD+WKLVGVVSDYDLLALDSISGG + DTS+FP V+S+WKTFNE+QRLLSKTN
Sbjct: 107 ITGFPVIDDNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTN 166
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
GKVVGDLMT APLVV E T+LED ARLLL+TKYRRLPVVD GKLVG+ITRGNVVRAALQ
Sbjct: 167 GKVVGDLMTTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQ 226
Query: 226 IKRDGE 231
IK E
Sbjct: 227 IKHAEE 232
>gi|18418376|ref|NP_567952.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75268156|sp|Q9C5D0.1|CBSX2_ARATH RecName: Full=CBS domain-containing protein CBSX2, chloroplastic;
AltName: Full=CBS domain-containing protein 1;
Short=AtCDCP1; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 1; Short=AtLEJ1; Flags:
Precursor
gi|13430838|gb|AAK26041.1|AF360331_1 unknown protein [Arabidopsis thaliana]
gi|15810601|gb|AAL07188.1| unknown protein [Arabidopsis thaliana]
gi|332660926|gb|AEE86326.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/196 (71%), Positives = 166/196 (84%), Gaps = 2/196 (1%)
Query: 41 KRLRFFTVSREVKAF--AHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEAL 98
+R F+ S V AF A V NSVP +NG YTVGDFMT +++LH VK +T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 99 ERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQ 158
E LVEK++TG PVIDD+W LVGVVSDYDLLALDSISG +QNDT+LFP+V+STWKTFNELQ
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQ 162
Query: 159 RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGN 218
+L+SKT GKVVGDLMTP+PLVV ++TNLEDAARLLLETK+RRLPVVD GKL+G++TRGN
Sbjct: 163 KLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGN 222
Query: 219 VVRAALQIKRDGERST 234
VVRAALQIKR+ E ST
Sbjct: 223 VVRAALQIKRETENST 238
>gi|356499765|ref|XP_003518707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 225
Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/207 (70%), Positives = 163/207 (78%), Gaps = 6/207 (2%)
Query: 25 PHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKED 84
P P+ + S + KR RF S F NSVP NGTYTV DFMTKK+D
Sbjct: 24 PQCHSPLR--SSSAVPKRRRFSNSS----GFRLASSQTVNSVPRANGTYTVSDFMTKKQD 77
Query: 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLF 144
LH VKTTTTVDEALE LV RI+G PVID+DW LVGVVSDYDLLA+DSISGG Q+D +LF
Sbjct: 78 LHVVKTTTTVDEALEALVNNRISGLPVIDEDWNLVGVVSDYDLLAIDSISGGPQSDANLF 137
Query: 145 PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
P+V+STWKTFNELQ+LLSKTNG+VVGDLMTP PLVVHE+T+LE+AARLLLETKYRRLPVV
Sbjct: 138 PDVDSTWKTFNELQKLLSKTNGQVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVV 197
Query: 205 DGYGKLVGLITRGNVVRAALQIKRDGE 231
D GKLVGLITRGN+V+AAL KR GE
Sbjct: 198 DDDGKLVGLITRGNIVKAALLSKRAGE 224
>gi|449525190|ref|XP_004169601.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 156/186 (83%)
Query: 46 FTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKR 105
F R+ + A +G + NS+P G Y VGDFMT+KE+LH VK TT+VDEALE LVEKR
Sbjct: 47 FPELRKSTSIAASGTLMANSLPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKR 106
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN 165
ITGFPVIDD+WKLVGVVSDYDLLALDSISGG + DTS+FP V+S+WKTFNE+QRLLSKTN
Sbjct: 107 ITGFPVIDDNWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTN 166
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
GKVVGDLMT APLVV E T+LED ARLLL+TKYRRLPVVD GKLVG+ITRGNVVRAALQ
Sbjct: 167 GKVVGDLMTTAPLVVREITDLEDVARLLLQTKYRRLPVVDADGKLVGIITRGNVVRAALQ 226
Query: 226 IKRDGE 231
IK E
Sbjct: 227 IKHAEE 232
>gi|388507816|gb|AFK41974.1| unknown [Medicago truncatula]
Length = 221
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/234 (64%), Positives = 178/234 (76%), Gaps = 13/234 (5%)
Query: 1 MSSISIPSCLTLARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGV 60
MSSI + + L L+ + +I H LP +V L KR RF +R F+
Sbjct: 1 MSSIHLINTLPLS--TPHRIILPHCHSLLPSSV-----LPKRHRFAQSAR----FSVVSS 49
Query: 61 GITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVG 120
NSVP NGTYTV DFMTKK +LH VKTTT+VDEALE LV+ RI+G PVID++W LVG
Sbjct: 50 QTVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVG 109
Query: 121 VVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV 180
VVSDYDLLA+D+ISG + D SLFP+V+STWKTFNE+Q+LLSKTNGKVVGDLMTP+PLVV
Sbjct: 110 VVSDYDLLAIDTISGSS--DASLFPDVDSTWKTFNEIQKLLSKTNGKVVGDLMTPSPLVV 167
Query: 181 HENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
HE+T+LEDAARLLLETKYRRLPVVD GKLVGLITRGN+V+AAL KR GER T
Sbjct: 168 HESTSLEDAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALLSKRSGERLT 221
>gi|224081731|ref|XP_002306482.1| predicted protein [Populus trichocarpa]
gi|222855931|gb|EEE93478.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 155/179 (86%), Gaps = 2/179 (1%)
Query: 54 AFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVID 113
A A +G + NS P++G YTVGDFMT+KEDLH VK TTTV+EALE LVE+RITGFPVID
Sbjct: 30 AAASSGTLMANS--PKSGVYTVGDFMTRKEDLHVVKPTTTVNEALETLVERRITGFPVID 87
Query: 114 DDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLM 173
DDWKLVG+VSDYDLLALDSISGG + +T++FP V+STWKTFNE+Q LL+KTNGKVVGDLM
Sbjct: 88 DDWKLVGLVSDYDLLALDSISGGGRTETNMFPEVDSTWKTFNEVQMLLNKTNGKVVGDLM 147
Query: 174 TPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
TPAP+VV E TNLED+ RLLLETKYRRLPVVD GKLVG+ITRGNVVRAAL IK ER
Sbjct: 148 TPAPVVVRETTNLEDSVRLLLETKYRRLPVVDADGKLVGIITRGNVVRAALHIKHAMER 206
>gi|255555395|ref|XP_002518734.1| conserved hypothetical protein [Ricinus communis]
gi|223542115|gb|EEF43659.1| conserved hypothetical protein [Ricinus communis]
Length = 220
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/198 (69%), Positives = 162/198 (81%), Gaps = 9/198 (4%)
Query: 36 PSHLSKR--LRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTT 93
PS S+R LR T + +NG+ PRNG YTVGDFMT+KEDL+ VKT TT
Sbjct: 29 PSCFSRRSALRSRTSAINFSTLTNNGL-------PRNGMYTVGDFMTRKEDLYVVKTMTT 81
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
VDEALE +VEK+I+GFPV+DD+WKLVGVVSDYDLLAL+SISG NQ+ T+LFP+ +S+WKT
Sbjct: 82 VDEALEAMVEKKISGFPVVDDNWKLVGVVSDYDLLALNSISGRNQSGTNLFPDTDSSWKT 141
Query: 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGL 213
FNE+Q+LL+K NGKVVGDLMTPAPLVV+E TNLEDAARLLL+TKY RLPVVDG GKLVG+
Sbjct: 142 FNEMQKLLTKNNGKVVGDLMTPAPLVVNETTNLEDAARLLLDTKYHRLPVVDGDGKLVGM 201
Query: 214 ITRGNVVRAALQIKRDGE 231
I R NVVRAALQIKR +
Sbjct: 202 IARENVVRAALQIKRASQ 219
>gi|147802944|emb|CAN64036.1| hypothetical protein VITISV_021555 [Vitis vinifera]
Length = 288
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/256 (59%), Positives = 167/256 (65%), Gaps = 51/256 (19%)
Query: 23 SVPHLQLPITV--------ATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYT 74
S PH Q+P T+ S + R + R A A G + NSVP +NG YT
Sbjct: 29 SFPH-QMPCTLLFQPGRKPPVGSTVGSRSERISGLRRSPALAAAGTLMANSVPSKNGVYT 87
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VGDFMT+KEDLH VK TTTV+EALE LVE RITGFPVIDDDWKLVG+VSDYDLLALDSIS
Sbjct: 88 VGDFMTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLALDSIS 147
Query: 135 ------------------------------------------GGNQNDTSLFPNVNSTWK 152
GG DT +FP V+STWK
Sbjct: 148 ELPQLKHVPEDISGKSLVLHGSLERQMKSLFLTAVDVLIFGSGGGLTDTIMFPEVDSTWK 207
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
TFNELQ+LLSKTNGKVVGDLMTPAP+VV E TNLEDAARLLLETKYRRLPVVD GKLVG
Sbjct: 208 TFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSDGKLVG 267
Query: 213 LITRGNVVRAALQIKR 228
+ITRGNVVRAALQIKR
Sbjct: 268 IITRGNVVRAALQIKR 283
>gi|442570759|pdb|4GQV|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 From
Arabidopsis Thaliana
Length = 166
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/164 (80%), Positives = 148/164 (90%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+G YTVG+FMTKKEDLH VK TTTVDEALE LVE RITGFPVID+DWKLVG+VSDYDLLA
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLA 61
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
LDSISG + + S+FP V+STWKTFN +Q+LLSKTNGK+VGDLMTPAPLVV E TNLEDA
Sbjct: 62 LDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDA 121
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
A++LLETKYRRLPVVD GKLVG+ITRGNVVRAALQIKR G+R+
Sbjct: 122 AKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRN 165
>gi|363808222|ref|NP_001242233.1| uncharacterized protein LOC100781400 [Glycine max]
gi|255647096|gb|ACU24016.1| unknown [Glycine max]
Length = 222
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 154/190 (81%), Gaps = 4/190 (2%)
Query: 41 KRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALER 100
KR RF S F NSVP NGTYTV DF TKK+DLH VKTTTTVDEALE
Sbjct: 37 KRRRFANSS----GFRLASSQTVNSVPRGNGTYTVADFATKKQDLHVVKTTTTVDEALEA 92
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
LV RI+G PVID+ W LVGVVSDYDLLA+DSISGG Q+D +LFPNV+STWKTFNELQ+L
Sbjct: 93 LVNYRISGLPVIDEVWNLVGVVSDYDLLAIDSISGGPQSDANLFPNVDSTWKTFNELQKL 152
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
LSKTNG+VVGDLMTP PLVVHE+T+LE+AARLLLETKYRRLPVVD GKLVGLITRGN+V
Sbjct: 153 LSKTNGQVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGLITRGNIV 212
Query: 221 RAALQIKRDG 230
+AAL KR G
Sbjct: 213 KAALLSKRAG 222
>gi|388522595|gb|AFK49359.1| unknown [Lotus japonicus]
Length = 222
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/165 (79%), Positives = 147/165 (89%)
Query: 64 NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
NSVPP+NG YTVGDFMTK+EDLH VK TTTVDEALE LVE R+TGFPVIDD W LV VVS
Sbjct: 52 NSVPPKNGVYTVGDFMTKREDLHVVKPTTTVDEALEMLVEHRVTGFPVIDDKWNLVCVVS 111
Query: 124 DYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHEN 183
DYDLLALDSISG + ++S+FP V+S+WKTFNE+Q LLSKTNGKV+G+LMT AP+VV EN
Sbjct: 112 DYDLLALDSISGNGRKESSMFPEVDSSWKTFNEVQNLLSKTNGKVIGELMTTAPMVVREN 171
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
TNLEDAARLLLETK+RRLPVVD G+LVG+ITRGNVV AALQIKR
Sbjct: 172 TNLEDAARLLLETKFRRLPVVDSEGRLVGIITRGNVVGAALQIKR 216
>gi|147839911|emb|CAN65905.1| hypothetical protein VITISV_004872 [Vitis vinifera]
Length = 298
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/194 (71%), Positives = 159/194 (81%), Gaps = 3/194 (1%)
Query: 42 RLRFFTVSREVKA---FAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEAL 98
RL F R +A + G N+ RNGTY VGDFMTKKE LH VK TT VDEAL
Sbjct: 103 RLPFLEAVRIEEARHVYPDGGDPDDNACHHRNGTYRVGDFMTKKEHLHVVKPTTPVDEAL 162
Query: 99 ERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQ 158
E LVEK+ITGFPVID+DWKLVG+VSDYDLLALDSISGG Q DT+LFP+V+S+WK FN++Q
Sbjct: 163 EALVEKKITGFPVIDEDWKLVGLVSDYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQ 222
Query: 159 RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGN 218
+LL+KT GKVVGD+MTPAP+VVHE TNLEDAARLLLETKYRRLPVVDG GKLVG++TRG+
Sbjct: 223 KLLAKTKGKVVGDVMTPAPVVVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVTRGS 282
Query: 219 VVRAALQIKRDGER 232
VVRAAL+IK E+
Sbjct: 283 VVRAALKIKGTREK 296
>gi|343172406|gb|AEL98907.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
gi|343172408|gb|AEL98908.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
Length = 227
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 165/220 (75%), Gaps = 8/220 (3%)
Query: 13 ARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGT 72
A L + +I +P + +++ S +LR F+ + NG +S P +NG
Sbjct: 14 ASLLSTSIIPKLPSVSRTFRLSS----SSKLRCFSAASAAVNSTFNG----HSSPSKNGV 65
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTVGDFMT +E+L VK TTTVDEALE LVEKRITGFPVIDDDWKLVG+VSDYDLLALD+
Sbjct: 66 YTVGDFMTTRENLAVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDT 125
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
ISG + S+FP V+S+WK FNELQ+LLSKTNGK+V D+MT APLVV E TNL+DAARL
Sbjct: 126 ISGTGLGEASMFPEVDSSWKVFNELQKLLSKTNGKLVADVMTQAPLVVRETTNLDDAARL 185
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
LLETKYRRLPVVD GKLVG+ITRGN +RAALQIKR E+
Sbjct: 186 LLETKYRRLPVVDADGKLVGIITRGNCIRAALQIKRASEK 225
>gi|356541776|ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Glycine max]
gi|255632210|gb|ACU16463.1| unknown [Glycine max]
Length = 228
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/169 (76%), Positives = 148/169 (87%)
Query: 64 NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
N V PR+G YTVGDFMTKKEDLH VK TT+VDEALE LVE RITGFPVIDD+WKLVGVVS
Sbjct: 58 NDVSPRSGLYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVS 117
Query: 124 DYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHEN 183
DYDLLALDSISG D ++FP V+STWKTFNE+Q+LLSKTNGK++G+LMT AP+VV E
Sbjct: 118 DYDLLALDSISGHGLKDNNMFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRET 177
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
TNLEDAARLLLETK+RRLPVVD G+LVG+ITRGNVVRAAL +K+ ++
Sbjct: 178 TNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHMKQANQK 226
>gi|34015153|gb|AAQ56349.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
Length = 190
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/165 (77%), Positives = 144/165 (87%)
Query: 67 PPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
P +G YTVGDFMTK+E+LH VK+TT+VDEALE LVE RITGFPVIDD+W LVGVVSDYD
Sbjct: 23 PQNSGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVVSDYD 82
Query: 127 LLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNL 186
LLALDSISG + +FP V+STWKTFNE+Q+LLSKTNGKV+GD+MT APLVV E TNL
Sbjct: 83 LLALDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRETTNL 142
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
EDAARLLLETKYRRLPVVD GKLVG+ITRGNVVRAAL+IK+ E
Sbjct: 143 EDAARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAALKIKKKFE 187
>gi|115475836|ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|50508236|dbj|BAD31758.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|215768507|dbj|BAH00736.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194170|gb|EEC76597.1| hypothetical protein OsI_14449 [Oryza sativa Indica Group]
gi|222640324|gb|EEE68456.1| hypothetical protein OsJ_26849 [Oryza sativa Japonica Group]
gi|258644543|dbj|BAI39797.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
gi|258644675|dbj|BAI39922.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
Length = 235
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 159/212 (75%), Gaps = 8/212 (3%)
Query: 23 SVPHLQLPI--TVATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRN-GTYTVGDFM 79
S P L P + A PS S R + H+ SV +N G YTVGDFM
Sbjct: 26 SEPRLAAPAAGSRAPPSRASVRPSAAAAPLAARGLPHHA-----SVAGQNSGIYTVGDFM 80
Query: 80 TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN 139
TK+E+LH VK+TT+VDEALE LVE RITGFPVIDD+W LVGVVSDYDLLALDSISG
Sbjct: 81 TKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVVSDYDLLALDSISGNGLA 140
Query: 140 DTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
+ +FP V+STWKTFNE+Q+LLSKTNGKV+GD+MT APLVV E TNLEDAARLLLETKYR
Sbjct: 141 EVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRETTNLEDAARLLLETKYR 200
Query: 200 RLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
RLPVVD GKLVG+ITRGNVVRAAL+IK+ E
Sbjct: 201 RLPVVDSSGKLVGIITRGNVVRAALKIKKKFE 232
>gi|356496921|ref|XP_003517313.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 228
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 149/169 (88%), Gaps = 1/169 (0%)
Query: 64 NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
N++ PR+G YTVGDFMTKKEDLH VK TT+VDEALE LVE RITGFPVIDD+WKLVGVVS
Sbjct: 59 NNISPRSGLYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVS 118
Query: 124 DYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHEN 183
DYDLLALDSISG D ++FP V+STWKTFNE+Q+LLSKTNGK++G+LMT AP+VV E
Sbjct: 119 DYDLLALDSISGHGLKD-NMFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRET 177
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
TNLEDAARLLLETK+RRLPVVD G+LVG+ITRGNVVRAAL +K+ ++
Sbjct: 178 TNLEDAARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHMKQANQK 226
>gi|224096724|ref|XP_002310713.1| predicted protein [Populus trichocarpa]
gi|222853616|gb|EEE91163.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 139/155 (89%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ 138
MT+KEDLH VK TTTVDEALE LVE RITGFPVIDDDWKLVG+VSDYDLLALDSISGG +
Sbjct: 1 MTRKEDLHVVKPTTTVDEALEALVEHRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGR 60
Query: 139 NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
+T++FP V STWKTFNE+QRLLSKTNGKVVGDLMTPAP+VV E TNLEDAARLLLETKY
Sbjct: 61 TETNMFPEVESTWKTFNEVQRLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKY 120
Query: 199 RRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
RRLPVVD GKLVG+ITRGNVVRAAL IK D ER
Sbjct: 121 RRLPVVDADGKLVGIITRGNVVRAALHIKHDIERK 155
>gi|224103629|ref|XP_002313129.1| predicted protein [Populus trichocarpa]
gi|222849537|gb|EEE87084.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 129/162 (79%), Positives = 142/162 (87%), Gaps = 1/162 (0%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+TVGDFMTK+EDLH K TTVDEALE LVEKRITGFPVIDD+WKLVGVVSDYDLL L S
Sbjct: 2 HTVGDFMTKREDLHVFKANTTVDEALEALVEKRITGFPVIDDNWKLVGVVSDYDLLVLGS 61
Query: 133 ISGGN-QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
ISG + QNDT+LFPNV+S+WKTFNELQ+LL K NGKVVGDLMTP PLVV+E TNLEDA R
Sbjct: 62 ISGSSCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKVVGDLMTPNPLVVYETTNLEDAVR 121
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
LLLETKYRRLPVVD GKLVG+ITRG++VRA+ QIK ERS
Sbjct: 122 LLLETKYRRLPVVDNDGKLVGIITRGDIVRASQQIKSSTERS 163
>gi|326488002|dbj|BAJ89840.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512290|dbj|BAJ96126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/171 (74%), Positives = 142/171 (83%)
Query: 63 TNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVV 122
T+ V G YTVGDFMTK+E LH VK +T+VDEALERLVE RITGFPV DD W LVGVV
Sbjct: 59 TSVVVEAGGAYTVGDFMTKREHLHVVKPSTSVDEALERLVEHRITGFPVTDDHWNLVGVV 118
Query: 123 SDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE 182
SDYDLLALDSISG Q + +FP V+STWKTF E+Q+LLSKTNGKVV D+MT APLVV E
Sbjct: 119 SDYDLLALDSISGNGQAEPDIFPEVDSTWKTFREIQKLLSKTNGKVVSDVMTSAPLVVRE 178
Query: 183 NTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
TNLEDAARLLL TKYRRLPVVDG GKLVG+ITRGNVVRAAL+ K++ E S
Sbjct: 179 TTNLEDAARLLLVTKYRRLPVVDGSGKLVGIITRGNVVRAALEFKKNVEGS 229
>gi|357145579|ref|XP_003573692.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 233
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/162 (76%), Positives = 139/162 (85%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
TYTVGDFMTK+E+LH VK TT+VDEALERLVE RITGFPVIDDDW LVGVVSDYDLLALD
Sbjct: 71 TYTVGDFMTKREELHVVKPTTSVDEALERLVEHRITGFPVIDDDWNLVGVVSDYDLLALD 130
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
SISG + +FP V+STWKTF E+Q+LLSKTNG+V+ D+MT +PLVV E TNLEDAAR
Sbjct: 131 SISGNGMAEGDIFPEVDSTWKTFREIQKLLSKTNGQVISDVMTSSPLVVRETTNLEDAAR 190
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
LLL TKYRRLPVVD GKLVG+ITRGNVVRAAL+ K+ E S
Sbjct: 191 LLLVTKYRRLPVVDSSGKLVGIITRGNVVRAALEFKKKVEGS 232
>gi|356624493|pdb|3SL7|A Chain A, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
gi|356624494|pdb|3SL7|B Chain B, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
Length = 180
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 121/159 (76%), Positives = 145/159 (91%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTVGDF T +++LH VK +T+VD+ALE LVEK++TG PVIDD+W LVGVVSDYDLLALDS
Sbjct: 4 YTVGDFXTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDS 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
ISG +QNDT+LFP+V+STWKTFNELQ+L+SKT GKVVGDL TP+PLVV ++TNLEDAARL
Sbjct: 64 ISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLXTPSPLVVRDSTNLEDAARL 123
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
LLETK+RRLPVVD GKL+G++TRGNVVRAALQIKR+ +
Sbjct: 124 LLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRNAD 162
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--AL-- 130
VGD T V+ +T +++A L+E + PV+D D KL+G+++ +++ AL
Sbjct: 100 VGDLXTPSP--LVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157
Query: 131 ----DSISGGNQNDTSLFPNVNS 149
DSISG +QNDT+LFP+V+S
Sbjct: 158 KRNADSISGRSQNDTNLFPDVDS 180
>gi|357150779|ref|XP_003575573.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 230
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/164 (74%), Positives = 141/164 (85%), Gaps = 2/164 (1%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
NG YTVGDFMTKK++LH VK +T+VDEALE LV+ RI+GFPVIDD+WKLVGVVSDYDLLA
Sbjct: 64 NGVYTVGDFMTKKDNLHVVKPSTSVDEALEMLVQHRISGFPVIDDNWKLVGVVSDYDLLA 123
Query: 130 LDSISGGNQND--TSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
LDS++G D TS+FP V+STWKTF E+QRLLSKTNGKV+ D+MTP PLVV E TNL+
Sbjct: 124 LDSMAGCGLADKNTSMFPEVDSTWKTFREIQRLLSKTNGKVISDVMTPTPLVVRETTNLD 183
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
AARLLLETKY RLPVV+ GKLVG+ITRGNVVRAAL+IK+ E
Sbjct: 184 AAARLLLETKYHRLPVVNSTGKLVGMITRGNVVRAALKIKKKAE 227
>gi|294462367|gb|ADE76732.1| unknown [Picea sitchensis]
Length = 252
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 117/167 (70%), Positives = 140/167 (83%)
Query: 62 ITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGV 121
+ VPP++ +TVGDFMT+KE+L VK TT VDEA+E LV RITG PV+D+DWKLVGV
Sbjct: 84 MATDVPPKHEVFTVGDFMTRKENLIVVKPTTMVDEAMESLVANRITGLPVVDNDWKLVGV 143
Query: 122 VSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVH 181
VSDYDLLALDSISG + +T FP V STWK FNELQ LL+KTNGK+V ++MTP+PLV+
Sbjct: 144 VSDYDLLALDSISGAGRTETGFFPQVGSTWKAFNELQNLLNKTNGKIVAEVMTPSPLVIR 203
Query: 182 ENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
E TNLEDAARLLLETKYRRLPVVD GKLVG++TRGNV++AAL++KR
Sbjct: 204 ETTNLEDAARLLLETKYRRLPVVDNSGKLVGILTRGNVIKAALKMKR 250
>gi|195619856|gb|ACG31758.1| IMP dehydrogenase [Zea mays]
gi|195637366|gb|ACG38151.1| IMP dehydrogenase [Zea mays]
gi|413922004|gb|AFW61936.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 119/161 (73%), Positives = 139/161 (86%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
G+Y VGD MTK+E+LH VK TT+VD+ALE LV+ RI+GFPVIDDDW LVGVVSDYDLLAL
Sbjct: 69 GSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLAL 128
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
D+ISG + +FP V+STWKTF+E+Q+LLSKTNGKV+ D+MTPAPLVV E TNLEDAA
Sbjct: 129 DTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAA 188
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
RLLL TKYRRLPVVD GKLVG+ITRGNVV+AAL+IK+ E
Sbjct: 189 RLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 229
>gi|171452350|dbj|BAG15866.1| hypothetical protein [Bruguiera gymnorhiza]
Length = 237
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 166/236 (70%), Gaps = 15/236 (6%)
Query: 9 CLTLARLNANGVINSVPHLQL-------PITVATPSHLSKRLRF---FTVSREVKAFAHN 58
CLT + N ++P + P+ A P+ +RLRF F R + A +
Sbjct: 5 CLTTSATNCYNPPMALPRQKHSLFCHHHPLVSARPTSKCRRLRFSHCFPPPRSSFSPAFS 64
Query: 59 GVGITNSVP-PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK 117
TN VP PR TY VG+FM KKEDL +KTTTTVDEAL LVE +TGFPVIDDDWK
Sbjct: 65 ----TNPVPAPREQTYKVGNFMIKKEDLLVLKTTTTVDEALVALVEDSVTGFPVIDDDWK 120
Query: 118 LVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAP 177
LVGVVSDYD+LA+DSISG +Q D ++FP+V+ +WKTFNEL+++L KT+GKVVGDLMTP P
Sbjct: 121 LVGVVSDYDILAIDSISGCSQIDRNVFPDVDLSWKTFNELRKILMKTHGKVVGDLMTPNP 180
Query: 178 LVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
LVVHE T++E ARLLL+TKY RLPVVD KLVG+I R +VV+AAL IKR ERS
Sbjct: 181 LVVHETTDIETVARLLLDTKYHRLPVVDSDDKLVGVIAREDVVKAALLIKRASERS 236
>gi|442570760|pdb|4GQW|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 (loop
Deletion) From Arabidopsis Thaliana
Length = 152
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/164 (76%), Positives = 138/164 (84%), Gaps = 14/164 (8%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+G YTVG+FMTKKEDLH VK TTTVDEALE LVE RITGFPVID+DWKLVG+VSDYDLLA
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLA 61
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
LDS +STWKTFN +Q+LLSKTNGK+VGDLMTPAPLVV E TNLEDA
Sbjct: 62 LDS--------------GDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDA 107
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
A++LLETKYRRLPVVD GKLVG+ITRGNVVRAALQIKR G+R+
Sbjct: 108 AKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSGDRN 151
>gi|226529195|ref|NP_001149160.1| LOC100282782 [Zea mays]
gi|195625176|gb|ACG34418.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/161 (73%), Positives = 138/161 (85%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
G+Y VGD MTK+E+LH VK TT+VD+ALE LV+ RI+GFPVIDDDW LVGVVSDYDLLAL
Sbjct: 69 GSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLAL 128
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
D+ISG + +FP V+ST KTF+E+Q+LLSKTNGKV+ D+MTPAPLVV E TNLEDAA
Sbjct: 129 DTISGAGPAEADIFPEVDSTSKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAA 188
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
RLLL TKYRRLPVVD GKLVG+ITRGNVV+AAL+IK+ E
Sbjct: 189 RLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 229
>gi|414587994|tpg|DAA38565.1| TPA: cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/164 (70%), Positives = 139/164 (84%), Gaps = 2/164 (1%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+ YTVGDFMT++++LH V+ TT VD+ALE LV+ RI+GFPV+DDDW LVGVVSDYDLLA
Sbjct: 61 HSNYTVGDFMTRRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLA 120
Query: 130 LDSISGGNQNDTS--LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
LDS+SG DTS +FP+V+STWKTF+ELQR+LSKTNGKV+GD+MT +PL V NTNL+
Sbjct: 121 LDSMSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLD 180
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
A RLLLETKYRRLPVVD GKLVG+ITRGNVV AAL+IK+ E
Sbjct: 181 AATRLLLETKYRRLPVVDSMGKLVGMITRGNVVSAALKIKKKTE 224
>gi|449438390|ref|XP_004136971.1| PREDICTED: CBS domain-containing protein CBSX2, chloroplastic-like
[Cucumis sativus]
Length = 215
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 162/221 (73%), Gaps = 10/221 (4%)
Query: 12 LARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNG 71
+A ++ V + P+ +LP T +LR V A A +G +++S+P RNG
Sbjct: 1 MASISTPYVPSVFPNSRLPTT---------QLRHAGYRSPVVALAFSGHRVSSSIPFRNG 51
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
+Y VGDFMTKK +L +K +T+V+EALE LVEK ++GFPV+DDDWKLVGVVSDYDLLALD
Sbjct: 52 SYAVGDFMTKKGNLQVLKPSTSVEEALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALD 111
Query: 132 SISG-GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
SISG G + ++FP+VN +W++F +Q+LLSK NG+VVGDLMTPAPLVV E N E+AA
Sbjct: 112 SISGVGGGDIINIFPDVNCSWESFKLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAA 171
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
RLLLETK+ RLPVVD GKLVG+ITR ++VR L++KR E
Sbjct: 172 RLLLETKFHRLPVVDCEGKLVGIITREDIVRVGLEMKRTQE 212
>gi|226506150|ref|NP_001147441.1| cystathionin beta synthase protein [Zea mays]
gi|195611422|gb|ACG27541.1| cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/161 (72%), Positives = 137/161 (85%), Gaps = 2/161 (1%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTVGDFMT +++LH V+ TT VD+ALE LV+ RI+GFPV+DDDW LVGVVSDYDLLALDS
Sbjct: 64 YTVGDFMTTRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDS 123
Query: 133 ISGGNQNDTS--LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+SG DTS +FP+V+STWKTF+ELQR+LSKTNGKV+GD+MT +PL V NTNL+ A
Sbjct: 124 MSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLDAAT 183
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
RLLLETKYRRLPVVD GKLVG+ITRGNVV AAL+IK+ E
Sbjct: 184 RLLLETKYRRLPVVDSMGKLVGMITRGNVVSAALKIKKKTE 224
>gi|238008544|gb|ACR35307.1| unknown [Zea mays]
gi|413922006|gb|AFW61938.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 156
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 133/153 (86%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ 138
MTK+E+LH VK TT+VD+ALE LV+ RI+GFPVIDDDW LVGVVSDYDLLALD+ISG
Sbjct: 1 MTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGP 60
Query: 139 NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
+ +FP V+STWKTF+E+Q+LLSKTNGKV+ D+MTPAPLVV E TNLEDAARLLL TKY
Sbjct: 61 AEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKY 120
Query: 199 RRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
RRLPVVD GKLVG+ITRGNVV+AAL+IK+ E
Sbjct: 121 RRLPVVDSSGKLVGIITRGNVVQAALEIKKKVE 153
>gi|115477978|ref|NP_001062584.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|46389988|dbj|BAD16230.1| CBS domain containing protein-like [Oryza sativa Japonica Group]
gi|113630817|dbj|BAF24498.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|215686955|dbj|BAG89764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692644|dbj|BAG88064.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201664|gb|EEC84091.1| hypothetical protein OsI_30399 [Oryza sativa Indica Group]
gi|222641067|gb|EEE69199.1| hypothetical protein OsJ_28393 [Oryza sativa Japonica Group]
Length = 227
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 116/166 (69%), Positives = 136/166 (81%), Gaps = 2/166 (1%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
NG YTVGDFMTK+ +LH V T+VDEALE LV+ +I+GFPV+DD KLVGVVSDYDLLA
Sbjct: 61 NGVYTVGDFMTKRPNLHVVTPATSVDEALETLVQHKISGFPVVDDTGKLVGVVSDYDLLA 120
Query: 130 LDSISGG--NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
LDSISG +TS+FP V+STWKTF E+QRLLSKTNGKV+ D+MT +PL V E+TNL+
Sbjct: 121 LDSISGSGLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYSPLAVRESTNLD 180
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
A RLLLETKYRRLPVVD GKLVG+ITRG VVRAAL+IK+ E +
Sbjct: 181 AATRLLLETKYRRLPVVDSTGKLVGMITRGTVVRAALKIKKTAEET 226
>gi|413922005|gb|AFW61937.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 260
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 139/190 (73%), Gaps = 28/190 (14%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDE----------------------------ALERL 101
G+Y VGD MTK+E+LH VK TT+VD+ ALE L
Sbjct: 68 TGSYRVGDVMTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLFFAALEML 127
Query: 102 VEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLL 161
V+ RI+GFPVIDDDW LVGVVSDYDLLALD+ISG + +FP V+STWKTF+E+Q+LL
Sbjct: 128 VKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLL 187
Query: 162 SKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
SKTNGKV+ D+MTPAPLVV E TNLEDAARLLL TKYRRLPVVD GKLVG+ITRGNVV+
Sbjct: 188 SKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQ 247
Query: 222 AALQIKRDGE 231
AAL+IK+ E
Sbjct: 248 AALEIKKKVE 257
>gi|168027670|ref|XP_001766352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682261|gb|EDQ68680.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 139/200 (69%), Gaps = 8/200 (4%)
Query: 33 VATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTT 92
V P H+ R F + R N P + TYTVGD+MT +L+ T
Sbjct: 53 VPVPVHVWSRGSSFPLPRSTMT--------ENPTPQKQETYTVGDYMTPVSELYCATVNT 104
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+DEALE LVEKRITG PVIDD LVGVVSDYDLLALDSISG Q +TSLFP TWK
Sbjct: 105 TIDEALEVLVEKRITGMPVIDDFGALVGVVSDYDLLALDSISGQRQPETSLFPEAGRTWK 164
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
F E+Q+LL KTNGK VGD+MTP+PLVV E TNLEDAAR+LL+TK+RRLPVV GKLVG
Sbjct: 165 AFKEIQKLLIKTNGKTVGDVMTPSPLVVSEQTNLEDAARVLLDTKFRRLPVVGDDGKLVG 224
Query: 213 LITRGNVVRAALQIKRDGER 232
L+TRGNVVRAAL +KR E
Sbjct: 225 LLTRGNVVRAALVMKRAAEE 244
>gi|302762132|ref|XP_002964488.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
gi|302820740|ref|XP_002992036.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300140158|gb|EFJ06885.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300168217|gb|EFJ34821.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
Length = 165
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/162 (70%), Positives = 132/162 (81%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTV DFMT ++DL V+ +TTVD+AL+ LV+ RITG PVID+D KLVGVVSDYDLLALDS
Sbjct: 1 YTVCDFMTPRKDLFCVRVSTTVDDALKLLVDNRITGLPVIDEDGKLVGVVSDYDLLALDS 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
ISG + SLFP STWK F E+Q LL+KT GK VGDLMTP+PLVV + N+EDAAR+
Sbjct: 61 ISGKRPSTNSLFPEAGSTWKAFKEIQHLLTKTQGKTVGDLMTPSPLVVRVDMNIEDAARI 120
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
LL+TKYRRLPVVD GKLVGLITRGNVVRAALQ+KR E +T
Sbjct: 121 LLDTKYRRLPVVDECGKLVGLITRGNVVRAALQVKRAAEENT 162
>gi|168039489|ref|XP_001772230.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676561|gb|EDQ63043.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/161 (70%), Positives = 130/161 (80%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTVGD+MT DL+ TT+DEALE LVEKRITG PVIDD LVGVVSDYDLLALDS
Sbjct: 1 YTVGDYMTPVSDLYCATVNTTIDEALEVLVEKRITGMPVIDDAGALVGVVSDYDLLALDS 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
ISG Q +TSLFP TWK F E+Q+LL KTNGK+VGD+MTP+PLVV E+TNLEDAAR+
Sbjct: 61 ISGQRQPETSLFPEAGRTWKAFREIQKLLVKTNGKMVGDVMTPSPLVVREHTNLEDAARV 120
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
LL+TK+RRLPVV GKLVGL+TRGNVVRAAL +KR E+
Sbjct: 121 LLDTKFRRLPVVGDDGKLVGLLTRGNVVRAALIMKRAAEKE 161
>gi|413922007|gb|AFW61939.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 184
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 133/181 (73%), Gaps = 28/181 (15%)
Query: 79 MTKKEDLHAVKTTTTVDE----------------------------ALERLVEKRITGFP 110
MTK+E+LH VK TT+VD+ ALE LV+ RI+GFP
Sbjct: 1 MTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLFFAALEMLVKHRISGFP 60
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
VIDDDW LVGVVSDYDLLALD+ISG + +FP V+STWKTF+E+Q+LLSKTNGKV+
Sbjct: 61 VIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIA 120
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
D+MTPAPLVV E TNLEDAARLLL TKYRRLPVVD GKLVG+ITRGNVV+AAL+IK+
Sbjct: 121 DVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAALEIKKKV 180
Query: 231 E 231
E
Sbjct: 181 E 181
>gi|313235700|emb|CBY11152.1| unnamed protein product [Oikopleura dioica]
Length = 158
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/131 (82%), Positives = 117/131 (89%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
L EKRITGFPVIDDDWKLVG+VSDYDLLALDSISG + D S+FP V+STWKTFNE+Q+L
Sbjct: 24 LYEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 83
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
LSKTNGK+VGDLMTPAP+VV E TNLEDAARLLLETKYRRLPVVD GKLVG+ITRGNVV
Sbjct: 84 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 143
Query: 221 RAALQIKRDGE 231
RAAL IK E
Sbjct: 144 RAALSIKHATE 154
>gi|168024159|ref|XP_001764604.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684182|gb|EDQ70586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/160 (68%), Positives = 128/160 (80%), Gaps = 1/160 (0%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTVGDFMT +L+ TT+DEALE LV++RITG PV+DD LVGVVSDYDLLALDS
Sbjct: 1 YTVGDFMTPMTELYCATENTTIDEALEVLVDRRITGMPVVDDTGALVGVVSDYDLLALDS 60
Query: 133 ISGGN-QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
ISG Q +TSLFP TWK F E+Q+LL KTNGK +GD+MTP+PLVV + TNLEDAA+
Sbjct: 61 ISGWQRQPETSLFPEAGRTWKAFKEIQKLLVKTNGKTIGDVMTPSPLVVRKQTNLEDAAK 120
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+LL+TK+RRLPVVD GKLVGL+TRGNVVRAAL +KR E
Sbjct: 121 VLLDTKFRRLPVVDQDGKLVGLLTRGNVVRAALYMKRTAE 160
>gi|2911050|emb|CAA17560.1| putative protein [Arabidopsis thaliana]
gi|7270361|emb|CAB80129.1| putative protein [Arabidopsis thaliana]
Length = 249
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 134/199 (67%), Gaps = 26/199 (13%)
Query: 41 KRLRFFTVSREVKAF--AHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEAL 98
+R F+ S V AF A V NSVP +NG YTVGDFMT +++LH VK +T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 99 ERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN---------- 148
E LVEK++TG PVIDD+W LVGVVSDYDLLALDSIS SL V
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISVKMIQTCSLMSTVPGKTIVCFICM 162
Query: 149 --------------STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
S +TFNELQ+L+SKT GKVVGDLMTP+PLVV ++TNLEDAARLLL
Sbjct: 163 NFLGMRFTYIMLEFSFGQTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLL 222
Query: 195 ETKYRRLPVVDGYGKLVGL 213
ETK+RRLPVVD GKLV +
Sbjct: 223 ETKFRRLPVVDADGKLVSI 241
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 162 SKTNGKVVGDLMTPAP--LVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+K G VGD MTP VV +T+++DA LL+E K LPV+D LVG+++
Sbjct: 72 AKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVS 127
>gi|293334723|ref|NP_001168672.1| uncharacterized protein LOC100382460 [Zea mays]
gi|223950107|gb|ACN29137.1| unknown [Zea mays]
gi|414587995|tpg|DAA38566.1| TPA: hypothetical protein ZEAMMB73_092445 [Zea mays]
Length = 196
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 114/164 (69%), Gaps = 33/164 (20%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+ YTVGDFMT++++LH V+ TT VD+ALE LV+ RI+GFPV+DDDW LVGVVSDYDLLA
Sbjct: 61 HSNYTVGDFMTRRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLA 120
Query: 130 LDSISGGNQNDTS--LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
LDS+SG DTS +FP+V+STWKTF+ELQR+LSKTNGKV+GD+MT +PL
Sbjct: 121 LDSMSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLA-------- 172
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
VG+ITRGNVV AAL+IK+ E
Sbjct: 173 -----------------------VGMITRGNVVSAALKIKKKTE 193
>gi|302762130|ref|XP_002964487.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
gi|300168216|gb|EFJ34820.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
Length = 168
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 114/170 (67%), Gaps = 9/170 (5%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
++ YT+ +F+ K+D V+ +TTVD+AL+ L++ RITG PVID D KLVGVVSDYDLL
Sbjct: 1 KHNYYTICNFIMPKKDPFCVQVSTTVDDALKLLMDNRITGLPVIDKDRKLVGVVSDYDLL 60
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
ALDSISG + SLFP STWK F E+Q L +KT GK VGDLMTP PLVV +
Sbjct: 61 ALDSISGKRPSTNSLFPEAGSTWKAFKEIQHLPTKTQGKTVGDLMTPLPLVVRAS----- 115
Query: 189 AARLLLETKYRRLPVVDGYGKL----VGLITRGNVVRAALQIKRDGERST 234
+L+T L ++D L VGLITRGNVVRAALQ+KR E +T
Sbjct: 116 CCGRVLKTGNEELDLLDCENSLVNFQVGLITRGNVVRAALQVKRAAEENT 165
>gi|384246295|gb|EIE19786.1| cystathionine beta-synthase [Coccomyxa subellipsoidea C-169]
Length = 155
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 115/150 (76%), Gaps = 2/150 (1%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ 138
MTK + + + + T+VDEALE +V+ R++G PV+D+ ++VGVVSDYDLL+LD++SG Q
Sbjct: 1 MTKGK-IFSARVNTSVDEALELMVKHRVSGLPVLDESNRVVGVVSDYDLLSLDAVSGKMQ 59
Query: 139 NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
+ FP ++ W +F+E+Q+L+ K G+VVGD+MT P+VV NT++ AAR+LL+T+
Sbjct: 60 -EAGFFPRADTNWDSFHEVQKLVLKNAGRVVGDVMTENPVVVRANTDMTSAARMLLDTRV 118
Query: 199 RRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
RRLPVVD G+LVG+ TRG+V++AAL ++R
Sbjct: 119 RRLPVVDDDGRLVGIFTRGDVIKAALDVRR 148
>gi|302820742|ref|XP_002992037.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
gi|300140159|gb|EFJ06886.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
Length = 154
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 103/149 (69%), Gaps = 11/149 (7%)
Query: 97 ALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNE 156
AL+ LV+ RITG PV D D KLVGVVSDY+LLALDSI G + SLFP STWK F E
Sbjct: 3 ALKLLVDNRITGLPVTDKDRKLVGVVSDYNLLALDSILGKRPSSNSLFPEAGSTWKAFKE 62
Query: 157 LQRLLSKTNGKVVGDLMTPAPLVVHE--NTNLEDA---------ARLLLETKYRRLPVVD 205
+Q LL+K GK VGDLMTP PLV+ ++E + R+LL+TKY+RLPVVD
Sbjct: 63 IQHLLTKIQGKTVGDLMTPLPLVLQTFLPYSIEISLKLLGFPLDPRILLDTKYQRLPVVD 122
Query: 206 GYGKLVGLITRGNVVRAALQIKRDGERST 234
G LVGLITRGNVVRAALQ+K E +T
Sbjct: 123 ESGNLVGLITRGNVVRAALQVKCAAEENT 151
>gi|159479170|ref|XP_001697671.1| hypothetical protein CHLREDRAFT_185012 [Chlamydomonas reinhardtii]
gi|158274281|gb|EDP00065.1| predicted protein [Chlamydomonas reinhardtii]
Length = 197
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 104/147 (70%), Gaps = 2/147 (1%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+ L++V TVD ALE LV RITG PV+D + ++VGVVSD+DLLALD++
Sbjct: 38 TVKDVMSSGT-LYSVSPEDTVDAALEILVNNRITGLPVLDTEGRVVGVVSDFDLLALDAV 96
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +D LFP+ +W+ F E++++L+KT GK + D+MTP P+ V TNL DA +L
Sbjct: 97 -GRVNDDNMLFPSAEQSWQAFKEVKKMLAKTAGKKIKDVMTPKPITVRPETNLNDATSIL 155
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVV 220
+ K RRLPVVD +GKLVGLI+RGN+V
Sbjct: 156 ISKKIRRLPVVDEHGKLVGLISRGNIV 182
>gi|302854300|ref|XP_002958659.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
gi|300255984|gb|EFJ40262.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
Length = 155
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
Query: 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLF 144
L + TVD ALE LV+ RITG PV+D + ++VGVVSD+DLLALD++ N+ D +LF
Sbjct: 6 LFSCYPEDTVDSALELLVQNRITGLPVVDAENRVVGVVSDFDLLALDAVGRVNE-DQNLF 64
Query: 145 PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
P+ + +W+ F E++++L+K+ GK + D+MT P+ V TNLEDA +L+ K RRLPVV
Sbjct: 65 PSADQSWQAFKEVKKMLAKSAGKKIKDVMTVQPITVRPETNLEDATNILIVKKIRRLPVV 124
Query: 205 DGYGKLVGLITRGNVVR 221
D GKLVGLI+RGN+V+
Sbjct: 125 DSDGKLVGLISRGNIVK 141
>gi|357475265|ref|XP_003607918.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508973|gb|AES90115.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 144
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 96/148 (64%), Gaps = 13/148 (8%)
Query: 1 MSSISIPSCLTLARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGV 60
MSSI + + L L+ + +I H LP +V L KR RF +R F+
Sbjct: 1 MSSIHLINTLPLS--TPHRIILPHCHSLLPSSV-----LPKRHRFAQSAR----FSVVSS 49
Query: 61 GITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVG 120
NSVP NGTYTV DFMTKK +LH VKTTT+VDEALE LV+ RI+G PVID++W LVG
Sbjct: 50 QTVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVG 109
Query: 121 VVSDYDLLALDSISGGNQNDTSLFPNVN 148
VVSDYDLLA+D+ISG +D SL P V+
Sbjct: 110 VVSDYDLLAIDTISGS--SDASLIPIVD 135
>gi|434395335|ref|YP_007130282.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
gi|428267176|gb|AFZ33122.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
Length = 153
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 95/149 (63%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + M++ D V+ T ++EA++ L EKRI+G PVIDDD KLVG++S+ DL+ ++
Sbjct: 4 TVAEVMSR--DPIVVRPETPLNEAIQILAEKRISGLPVIDDDGKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + + +R L K G+ VG++M+ P+ V + +L +AA+L+
Sbjct: 61 -GVTPPAYIMILDSVIYLQNPAKYERDLHKALGQTVGEVMSSDPVTVSPDKSLREAAKLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + RRLPV+D GK++G++TRG+VVRA
Sbjct: 120 HDREVRRLPVIDAEGKIIGILTRGDVVRA 148
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V ++M+ P+VV T L +A ++L E + LPV+D GKLVG+I+ +++
Sbjct: 3 KTVAEVMSRDPIVVRPETPLNEAIQILAEKRISGLPVIDDDGKLVGIISETDLM 56
>gi|428304476|ref|YP_007141301.1| hypothetical protein Cri9333_0874 [Crinalium epipsammum PCC 9333]
gi|428246011|gb|AFZ11791.1| CBS domain containing membrane protein [Crinalium epipsammum PCC
9333]
Length = 152
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M++ D+ V+ T +++A++ L E+RITG PV+DD KLVGV+S+ DL+ ++
Sbjct: 4 TVADVMSR--DVITVQPQTPLNQAIQILAERRITGLPVVDDADKLVGVISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + +R L K G+ VG++MT +V+ L++AA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPTTYERDLHKALGQTVGEVMTTEAIVIKPEKPLQEAAKLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
E RRLPVVD GK++G++TRG+++R
Sbjct: 120 HEKHIRRLPVVDDTGKVLGILTRGDIIR 147
>gi|357475267|ref|XP_003607919.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508974|gb|AES90116.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 77
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 58/70 (82%), Gaps = 2/70 (2%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ 138
MTKK +LH VKTTT+VDEALE LV+ RI+G PVID++W LVGVVSDYDLLA+D+ISG
Sbjct: 1 MTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGVVSDYDLLAIDTISG--S 58
Query: 139 NDTSLFPNVN 148
+D SL P V+
Sbjct: 59 SDASLIPIVD 68
>gi|298490018|ref|YP_003720195.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
gi|298231936|gb|ADI63072.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
Length = 152
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 92/149 (61%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+ L V+ T + EA++ L EKRI+G PVIDD K+VG++S+ DL+ ++
Sbjct: 4 TVADVMSSNPIL--VRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + +R L K G+ VG++M+ +P+ + + L++AA+++
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPGAYERDLHKALGQTVGEVMSKSPITITPDKPLKEAAKII 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E K RLPV+D G+++G++TRG+++RA
Sbjct: 120 QEYKVHRLPVLDSTGQVIGILTRGDIIRA 148
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P++V T L++A ++L E + LPV+D GK+VG+I+ +++
Sbjct: 3 KTVADVMSSNPILVRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLM 56
>gi|357475269|ref|XP_003607920.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508975|gb|AES90117.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 110
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 73/119 (61%), Gaps = 11/119 (9%)
Query: 1 MSSISIPSCLTLARLNANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFAHNGV 60
MSSI + + L L+ + +I H LP +V L KR RF +R F+
Sbjct: 1 MSSIHLINTLPLS--TPHRIILPHCHSLLPSSV-----LPKRHRFAQSAR----FSVVSS 49
Query: 61 GITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLV 119
NSVP NGTYTV DFMTKK +LH VKTTT+VDEALE LV+ RI+G PVID++W LV
Sbjct: 50 QTVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLV 108
>gi|434384451|ref|YP_007095062.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
gi|428015441|gb|AFY91535.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
Length = 152
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M + +L VK +T + +A++ LV++ I+G PVIDDD KLVGV+S+ DL+ +
Sbjct: 5 VADWMNR--ELITVKPSTPLADAVKLLVDRHISGLPVIDDDGKLVGVISEADLMWREQ-- 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G Q +F +K R L K G+ VG++MTP + + +T L +AAR+L
Sbjct: 61 GLEQPPYMIFLGGVIYFKNPLTYDRDLHKALGQTVGEVMTPHAISISADTTLPEAARILH 120
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ K RLPVVD + +G+IT ++VRA
Sbjct: 121 DKKIHRLPVVDENDRPIGIITESDIVRA 148
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K+V D M + V +T L DA +LL++ LPV+D GKLVG+I+ +++
Sbjct: 3 KIVADWMNRELITVKPSTPLADAVKLLVDRHISGLPVIDDDGKLVGVISEADLM 56
>gi|354565001|ref|ZP_08984177.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
gi|353550127|gb|EHC19566.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
Length = 154
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M++ D V+ T + EA++ L E+RI+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMSR--DPIVVRPETPLKEAIQILAERRISGLPVVDDAGKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + K +R L K G+ VG++M+ P+ V + L +AA+++
Sbjct: 61 -GVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKQPITVSPDKTLREAAKIM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV+D G+++G++TRG+V+RA
Sbjct: 120 NDRNVHRLPVLDSEGQVIGILTRGDVIRA 148
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P+VV T L++A ++L E + LPVVD GKLVG+I+ +++
Sbjct: 3 KTVADVMSRDPIVVRPETPLKEAIQILAERRISGLPVVDDAGKLVGIISETDLM 56
>gi|300868882|ref|ZP_07113488.1| signal transduction protein [Oscillatoria sp. PCC 6506]
gi|300333099|emb|CBN58680.1| signal transduction protein [Oscillatoria sp. PCC 6506]
Length = 175
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 95/170 (55%), Gaps = 5/170 (2%)
Query: 53 KAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVI 112
+AF ++ N +PP TV D MT+ L + + EA++ L E+RI+G PV+
Sbjct: 6 RAFIYDLPREINRIPPIMPK-TVADVMTRDPIL--ARPEMPLSEAIKILAERRISGLPVV 62
Query: 113 DDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDL 172
D++ KLVGV+S+ DL+ + G + + + +R L K G+ VG++
Sbjct: 63 DENEKLVGVISETDLMWQEV--GVTPPAYIMLLDSVIYLENPGRYERELHKALGQTVGEV 120
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
M+ P+ + +L +AARL+ E RLPV+D GK +G++TRG++VRA
Sbjct: 121 MSRDPITTTPDKSLPEAARLMHERSIHRLPVIDPTGKAIGILTRGDIVRA 170
>gi|428206039|ref|YP_007090392.1| putative signal transduction protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428007960|gb|AFY86523.1| putative signal transduction protein with CBS domains
[Chroococcidiopsis thermalis PCC 7203]
Length = 154
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ D V+ T++ +A++ L EKRI+G PV+DD KL+G +S+ DL+ ++
Sbjct: 4 TVADVMTR--DPIVVRPETSLHDAIKLLAEKRISGLPVVDDAGKLIGTISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + K + +R L K G+ VG++M+ + V + L DAA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIFLKNPAQYERDLHKALGQTVGEVMSQDLITVAPDKPLRDAAQLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ K RLPVVD GK++G++TRG++VR
Sbjct: 120 HDRKIPRLPVVDPSGKVIGILTRGDIVR 147
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MT P+VV T+L DA +LL E + LPVVD GKL+G I+ +++
Sbjct: 3 KTVADVMTRDPIVVRPETSLHDAIKLLAEKRISGLPVVDDAGKLIGTISETDLM 56
>gi|428202316|ref|YP_007080905.1| putative contains C-terminal CBS domains [Pleurocapsa sp. PCC 7327]
gi|427979748|gb|AFY77348.1| putative transcriptional regulator, contains C-terminal CBS domains
[Pleurocapsa sp. PCC 7327]
Length = 153
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 5/152 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT + AVK T ++EA++ L EK I+G PV+DD KLVGV+S+ DL+ +
Sbjct: 2 TKTVADVMTP--NPIAVKPQTPLNEAIKLLCEKHISGMPVVDDAGKLVGVISESDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + ++ + K G+ VG++MT P+ + + +L++AAR
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMTDKPISITPDRSLKEAAR 117
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVRA 222
++ E K RRL VVDG GK +G++T+G+++RA
Sbjct: 118 IMHEKKIRRLVVVDGEDGKAIGILTQGDIIRA 149
>gi|414077401|ref|YP_006996719.1| hypothetical protein ANA_C12164 [Anabaena sp. 90]
gi|413970817|gb|AFW94906.1| CBS domain-containing protein [Anabaena sp. 90]
Length = 152
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M++ L V T + EA++ L EK I+G PVIDD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMSRDPIL--VHPQTPLKEAIQILAEKHISGLPVIDDAGKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + +R L K G+ VG++M+ PL + + L +AA+L+
Sbjct: 61 -GITPPAYIMILDSVIYLQNPATYERDLHKALGQTVGEVMSKNPLTISPDKPLREAAKLI 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
E K RLPV+D GK++G++TRG+++R
Sbjct: 120 QEHKVHRLPVLDNAGKVIGILTRGDIIR 147
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P++VH T L++A ++L E LPV+D GKLVG+I+ +++
Sbjct: 3 KTVADVMSRDPILVHPQTPLKEAIQILAEKHISGLPVIDDAGKLVGIISETDLM 56
>gi|119511029|ref|ZP_01630149.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
gi|119464280|gb|EAW45197.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
Length = 165
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+ + TV D MT+ D ++T T + EA++ L EKRI+G PV+DD KLVG++S+ DL+
Sbjct: 12 KQMSKTVTDIMTR--DPIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETDLM 69
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
++ G +F + + R L K G+ VG++M+ P+ + +++
Sbjct: 70 WQET--GVTPPAYIMFLDSVIYLQNPATYDRELHKALGQTVGEVMSKNPVTIAPEKTVKE 127
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
AA+L+ + RLPV+D ++VG++TRG++VRA
Sbjct: 128 AAQLMHDRSVHRLPVIDSQSQVVGIVTRGDIVRA 161
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+SK K V D+MT P+V+ T L++A ++L E + +PVVD GKLVG+I+ +++
Sbjct: 10 ISKQMSKTVTDIMTRDPIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETDLM 69
>gi|443323171|ref|ZP_21052180.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
gi|442787081|gb|ELR96805.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
Length = 144
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 82/134 (61%), Gaps = 2/134 (1%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V+ T + EA++ L EKRI+G PV+DD+ LVGV+SD DL+ ++ G +F +
Sbjct: 8 VQPETPLSEAIKILAEKRISGLPVVDDEGALVGVISDTDLMWQET--GVEPPPYIMFLDS 65
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ ++ + K G+ VG++MT P+ + ++ +AAR++ + RRLPV+D
Sbjct: 66 VIYLENPKRYEKEIHKALGQTVGEVMTSKPITITPEQSMREAARVMHDKNIRRLPVIDTE 125
Query: 208 GKLVGLITRGNVVR 221
K+VG+ITRG+++R
Sbjct: 126 AKVVGIITRGDIIR 139
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
MTP PL V T L +A ++L E + LPVVD G LVG+I+
Sbjct: 1 MTPNPLTVQPETPLSEAIKILAEKRISGLPVVDDEGALVGVIS 43
>gi|434406932|ref|YP_007149817.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
gi|428261187|gb|AFZ27137.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
Length = 152
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT D V+ T + EA++ L EKRI+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMTC--DPIVVRRETPLKEAIQTLAEKRISGLPVVDDVEKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + +R L K G+ VG++M+ P+ + + L +AA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPATYERDLHKALGQTVGEVMSKNPITISPDKTLREAAKLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV+D G+++G++TRG+++R+
Sbjct: 120 HDRSIHRLPVLDSAGQVIGILTRGDIIRS 148
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MT P+VV T L++A + L E + LPVVD KLVG+I+ +++
Sbjct: 3 KTVADVMTCDPIVVRRETPLKEAIQTLAEKRISGLPVVDDVEKLVGIISETDLM 56
>gi|443326695|ref|ZP_21055340.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
gi|442793685|gb|ELS03127.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
Length = 152
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + VK T + EA+ L E + +G PV+DD KLVGV+S+ DL+ +S
Sbjct: 4 TVADIMTTNPIV--VKPNTPLQEAISILAENKFSGLPVVDDAGKLVGVISESDLMWQES- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + K + + K G+ VG++M+ P+ V ++ DAAR++
Sbjct: 61 -GIESPPYIMFLDSIIYLKNPARYNQEIHKALGQTVGEVMSDRPITVEAEQSVPDAARIM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ K RRLPVVD K++G++T+G+V++
Sbjct: 120 HDKKVRRLPVVDEEAKIIGIVTQGDVIK 147
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MT P+VV NT L++A +L E K+ LPVVD GKLVG+I+ +++
Sbjct: 3 KTVADIMTTNPIVVKPNTPLQEAISILAENKFSGLPVVDDAGKLVGVISESDLM 56
>gi|427731961|ref|YP_007078198.1| putative contains C-terminal CBS domains [Nostoc sp. PCC 7524]
gi|427367880|gb|AFY50601.1| putative transcriptional regulator, contains C-terminal CBS domains
[Nostoc sp. PCC 7524]
Length = 154
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 91/149 (61%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+ + + V+ T + EA++ L E+RI+G PV+DD KL+G++S+ DL+ ++
Sbjct: 4 TVADIMSPEPIV--VRPDTPLQEAIQILAERRISGLPVVDDVGKLLGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + K +R L K G++VG++M+ P+ + + ++ AA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIYLKNPAVYERDLHKALGQIVGEVMSKNPVTITPDKTVKQAAQLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV+D GK+VG++TRG+++RA
Sbjct: 120 HDRNVHRLPVLDSIGKVVGILTRGDIIRA 148
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+P P+VV +T L++A ++L E + LPVVD GKL+G+I+ +++
Sbjct: 3 KTVADIMSPEPIVVRPDTPLQEAIQILAERRISGLPVVDDVGKLLGIISETDLM 56
>gi|428212235|ref|YP_007085379.1| hypothetical protein Oscil6304_1781 [Oscillatoria acuminata PCC
6304]
gi|428000616|gb|AFY81459.1| CBS-domain-containing membrane protein [Oscillatoria acuminata PCC
6304]
Length = 154
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + MT+ D V + T++DEA++ + E+R +G PV+D KL+G++S DL+ +S
Sbjct: 4 TVAEIMTR--DPIVVTSQTSLDEAIQIMAERRFSGLPVVDAAGKLIGIISQGDLMWRES- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + + QR L K G+ VG++M+ P + +L +AA L+
Sbjct: 61 -GVTPPPYIMVLDSVIYLENPAKYQRDLHKALGQTVGEVMSTNPQTIRPEKSLREAAELM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPV+D GK +G++TRG++VRA
Sbjct: 120 HEKGVHRLPVIDSEGKPIGILTRGDIVRA 148
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 40/55 (72%)
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V ++MT P+VV T+L++A +++ E ++ LPVVD GKL+G+I++G+++
Sbjct: 2 AKTVAEIMTRDPIVVTSQTSLDEAIQIMAERRFSGLPVVDAAGKLIGIISQGDLM 56
>gi|427709353|ref|YP_007051730.1| putative signal transduction protein [Nostoc sp. PCC 7107]
gi|427361858|gb|AFY44580.1| putative signal transduction protein with CBS domains [Nostoc sp.
PCC 7107]
Length = 164
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 4/154 (2%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+ + TV D M++ D V+ T + EA++ L EKRI+G PV+DD KLVG++S+ DL+
Sbjct: 11 KQMSKTVADVMSR--DPIVVRAETPLKEAIKILAEKRISGLPVVDDVGKLVGIISETDLM 68
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
++ G +F + K R L K G+ VG++M+ + + N L++
Sbjct: 69 WQET--GVTPPAYIMFLDSVIYLKNPATYDRDLHKALGQTVGEVMSKNAVTISPNKTLKE 126
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
AA+++ RLPV+D G++VG++TRG+V+RA
Sbjct: 127 AAQMMHNRNVHRLPVLDTEGQVVGILTRGDVIRA 160
>gi|427716841|ref|YP_007064835.1| putative signal transduction protein [Calothrix sp. PCC 7507]
gi|427349277|gb|AFY32001.1| putative signal transduction protein with CBS domains [Calothrix
sp. PCC 7507]
Length = 154
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M++ + V+T T + EA++ L E+RI+G PV+DD +LVG++S+ DL+ +
Sbjct: 4 TVDDVMSRNPIV--VRTETPLKEAIQILAERRISGLPVVDDAGQLVGIISETDLMWQQT- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + + +R L K G+ VG++M+ P+ + + +AA+++
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPGDYERDLHKALGQTVGEVMSKNPITISPEKTVREAAKIM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV+D G+++G++TRG++VRA
Sbjct: 120 HDRHVHRLPVLDSAGQVIGILTRGDIVRA 148
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P+VV T L++A ++L E + LPVVD G+LVG+I+ +++
Sbjct: 3 KTVDDVMSRNPIVVRTETPLKEAIQILAERRISGLPVVDDAGQLVGIISETDLM 56
>gi|186685839|ref|YP_001869035.1| signal transduction protein [Nostoc punctiforme PCC 73102]
gi|186468291|gb|ACC84092.1| putative signal transduction protein with CBS domains [Nostoc
punctiforme PCC 73102]
Length = 154
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 89/149 (59%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M++ D V+ T + EA++ L E+ I+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVADVMSR--DPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + K +R L K G+ VG++M+ P+ + + L++AA ++
Sbjct: 61 -GVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKNPIAISPDKTLKEAATIM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV+DG +++G++TRG+++RA
Sbjct: 120 HDRSVHRLPVLDGTDQVIGILTRGDIIRA 148
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P+VV T L++A ++L E LPVVD GKLVG+I+ +++
Sbjct: 3 KTVADVMSRDPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLM 56
>gi|428779471|ref|YP_007171257.1| contains C-terminal CBS domains [Dactylococcopsis salina PCC 8305]
gi|428693750|gb|AFZ49900.1| putative transcriptional regulator, contains C-terminal CBS domains
[Dactylococcopsis salina PCC 8305]
Length = 153
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + V+ T + EA++ LVEK+I+G PV+D+ KLVGV+S+ DL+ ++
Sbjct: 4 TVADIMTANPAV--VQPETPLKEAIKLLVEKKISGLPVVDEAEKLVGVLSEADLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + + + L K G+ VG++M+ + + + L++AA+L+
Sbjct: 61 -GVETPPYFMFLDSVIYLQNPAQYDKELHKALGQTVGEVMSDRAVSITGDRPLKEAAQLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ + RRLPVVD GK+VG+ITRG++VR
Sbjct: 120 HKREVRRLPVVDEAGKVVGIITRGDIVR 147
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MT P VV T L++A +LL+E K LPVVD KLVG+++ +++
Sbjct: 3 KTVADIMTANPAVVQPETPLKEAIKLLVEKKISGLPVVDEAEKLVGVLSEADLM 56
>gi|440682247|ref|YP_007157042.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
gi|428679366|gb|AFZ58132.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
Length = 152
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + V T + EA++ L EKRI+G PVI++ KLVG++S+ DL+ ++
Sbjct: 4 TVADVMTINPIV--VSLETPLKEAIQILAEKRISGLPVINNAGKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + R L K G+ VG++M+ PL + + +L++AA+++
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPATYDRDLHKALGQTVGEVMSKNPLTITPDKSLKEAAKII 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
E K RLPV+D G+++G++TRG+++R
Sbjct: 120 QEHKVHRLPVLDNAGQVIGILTRGDIIR 147
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MT P+VV T L++A ++L E + LPV++ GKLVG+I+ +++
Sbjct: 3 KTVADVMTINPIVVSLETPLKEAIQILAEKRISGLPVINNAGKLVGIISETDLM 56
>gi|428312214|ref|YP_007123191.1| contains C-terminal CBS domains [Microcoleus sp. PCC 7113]
gi|428253826|gb|AFZ19785.1| putative transcriptional regulator, contains C-terminal CBS domains
[Microcoleus sp. PCC 7113]
Length = 155
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M++ D VK T + EA++ L E+RI+G PV+DD LVGV+S+ DLL ++
Sbjct: 4 TVADVMSR--DPIMVKPQTPIKEAIKILAEQRISGLPVVDDAGSLVGVISETDLLWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + ++ L K G+ VG++M+ P+ V + L AA+L+
Sbjct: 61 -GVEPPIYIMFLDSVIFLENPARHEQELHKALGQTVGEVMSTNPVTVESDQPLRKAAKLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RRL VV+ GK++G++T G++VRA
Sbjct: 120 QEKSIRRLAVVNDQGKVIGILTPGDIVRA 148
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P++V T +++A ++L E + LPVVD G LVG+I+ +++
Sbjct: 2 AKTVADVMSRDPIMVKPQTPIKEAIKILAEQRISGLPVVDDAGSLVGVISETDLL 56
>gi|75908110|ref|YP_322406.1| signal transduction protein [Anabaena variabilis ATCC 29413]
gi|75701835|gb|ABA21511.1| Predicted signal transduction protein containing CBS domains
[Anabaena variabilis ATCC 29413]
Length = 152
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+ + VK T + EA++ L E+RI+G PV+D+D KL+G++S+ DL+ ++
Sbjct: 4 TVADVMSHNPVV--VKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + +R L K G+ VG++M+ P+ V +++ AA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSVKQAAQLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV+D G+++G++TRG+++RA
Sbjct: 120 HDRNVHRLPVLDDAGQVIGILTRGDIIRA 148
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P+VV T L++A ++L E + LPVVD GKL+G+I+ +++
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56
>gi|17231305|ref|NP_487853.1| hypothetical protein alr3813 [Nostoc sp. PCC 7120]
gi|17132947|dbj|BAB75512.1| alr3813 [Nostoc sp. PCC 7120]
Length = 152
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+ + VK T + EA++ L E+RI+G PV+D+D KL+G++S+ DL+ ++
Sbjct: 4 TVADVMSHNPVV--VKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + +R L K G+ VG++M+ P+ V +++ AA+L+
Sbjct: 61 -GVTPPAYIMFLDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSVKQAAQLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV+D G+++G++TRG+++RA
Sbjct: 120 HDRNVHRLPVLDDAGQVIGILTRGDIIRA 148
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+M+ P+VV T L++A ++L E + LPVVD GKL+G+I+ +++
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56
>gi|428778151|ref|YP_007169938.1| signal transduction protein [Halothece sp. PCC 7418]
gi|428692430|gb|AFZ45724.1| putative signal transduction protein with CBS domains [Halothece
sp. PCC 7418]
Length = 152
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + V+ T + EA++ LVEK+I+G PV++ D KLVGV+S+ DL+ ++
Sbjct: 4 TVADVMTANPAV--VQPDTPLKEAIKVLVEKKISGLPVVNKDGKLVGVLSEADLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G N +F + + ++ L K G+ V ++MT + + + L++AA L+
Sbjct: 61 -GVNPPPYFMFLDSVIYLENPARYEKELHKALGQTVEEVMTDRAISITGDRPLKEAAHLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ + RRLPV+D GK+VG+ITRG++VR
Sbjct: 120 HKREVRRLPVLDDEGKVVGIITRGDIVR 147
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MT P VV +T L++A ++L+E K LPVV+ GKLVG+++ +++
Sbjct: 3 KTVADVMTANPAVVQPDTPLKEAIKVLVEKKISGLPVVNKDGKLVGVLSEADLM 56
>gi|308809011|ref|XP_003081815.1| unnamed protein product [Ostreococcus tauri]
gi|116060282|emb|CAL55618.1| unnamed protein product [Ostreococcus tauri]
Length = 285
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL--DSISGGNQNDTSLF 144
+V +V EA++ LVE RI+ PV+D+ ++GVVS+YDL+A + + D +F
Sbjct: 80 SVGPNASVFEAMKLLVENRISAVPVVDEKGVVLGVVSEYDLMARVGKKETTRSVKDDGMF 139
Query: 145 P----------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P NV W F+ LQ + K +G V M P +T L +A L+L
Sbjct: 140 PRVGRCDEFNGNVKQMWNQFHNLQERMYKASGTKVLTAMHETPATCTPDTPLVEATELML 199
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ RLPVVD G L+G+++RG+++R Q
Sbjct: 200 DKNLARLPVVDERGALLGILSRGDIMRRTFQ 230
>gi|282896431|ref|ZP_06304452.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
gi|281198719|gb|EFA73599.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
Length = 152
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV MT + V T + +A++ L EK+I+G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + +R L K G+ VG++M+ P+ + + +L+ AA+++
Sbjct: 61 -GITPPAYIMFLDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKAAAKII 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ K RRLPVVD ++G++TRG+++RA
Sbjct: 120 QDHKVRRLPVVDDSATVIGILTRGDIIRA 148
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V +MT P++V+ T L+ A ++L E + LPVVD GKLVG+I+ +++
Sbjct: 3 KTVAQVMTHNPIMVNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLM 56
>gi|443309785|ref|ZP_21039472.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
gi|442780178|gb|ELR90384.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
Length = 154
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 84/135 (62%), Gaps = 2/135 (1%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
VK T ++EA++ + E+RI+G PV+ DD +LVG++S+ DL+ ++ G +F +
Sbjct: 16 VKPQTPLNEAIKIMAERRISGLPVVGDDDRLVGIISETDLMWQET--GVTPPAYIMFLDS 73
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ +R L K G+ VG++M+ P+ + + L++AA+LL + RRLPVVD
Sbjct: 74 VIFLQNPATYERDLHKALGQTVGEVMSTDPITISADKPLKNAAQLLHDRDIRRLPVVDAN 133
Query: 208 GKLVGLITRGNVVRA 222
+VG++TRG+++RA
Sbjct: 134 NLVVGILTRGDIIRA 148
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V + MT P+VV T L +A +++ E + LPVV +LVG+I+ +++
Sbjct: 3 KTVAEAMTSLPVVVKPQTPLNEAIKIMAERRISGLPVVGDDDRLVGIISETDLM 56
>gi|56752279|ref|YP_172980.1| hypothetical protein syc2270_d [Synechococcus elongatus PCC 6301]
gi|81300633|ref|YP_400841.1| hypothetical protein Synpcc7942_1824 [Synechococcus elongatus PCC
7942]
gi|24251259|gb|AAN46179.1| unknown protein [Synechococcus elongatus PCC 7942]
gi|56687238|dbj|BAD80460.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169514|gb|ABB57854.1| CBS [Synechococcus elongatus PCC 7942]
Length = 154
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 7/156 (4%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV DFMT+ D +VK T + EA+ L +K I+G PV+D+ +LVGV+S+ DL+ +
Sbjct: 2 TATVADFMTR--DPISVKPQTPLTEAIRILADKHISGLPVVDEAGQLVGVLSETDLMWRE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFN--ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
S G ++S N ++ L K G+ V ++MT PL + + L +A
Sbjct: 60 S---GVPTPPPYIQVLDSFIYLENPARYEQELHKALGETVAEVMTAQPLTIAADRPLPEA 116
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
ARL + K RL V+ G ++VG+ITRG+++RA Q
Sbjct: 117 ARLFNDRKVHRLFVLSGDHQVVGVITRGDIIRAMAQ 152
>gi|427733825|ref|YP_007053369.1| putative contains C-terminal CBS domains [Rivularia sp. PCC 7116]
gi|427368866|gb|AFY52822.1| putative transcriptional regulator, contains C-terminal CBS domains
[Rivularia sp. PCC 7116]
Length = 154
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
VKT T + EA++ L EKRI+G PV+DD L+G++S+ DL+ + F
Sbjct: 16 VKTDTPLREAIKILAEKRISGLPVVDDAGHLIGIISETDLMW----QQAGVTPPAYFMIF 71
Query: 148 NSTWKTFN--ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+S N E +R L K G+ VG++M+ P+ + + L +AA+++ + K RLPVVD
Sbjct: 72 DSVIYLKNPIEYERELHKALGQTVGEVMSQKPITISPDKPLREAAKIMRDRKIHRLPVVD 131
Query: 206 GYGKLVGLITRGNVVRAALQIK 227
++VG+++ G+++R Q++
Sbjct: 132 DSEQIVGILSLGDIIRDMAQVE 153
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V ++MT P+ V +T L +A ++L E + LPVVD G L+G+I+ +++
Sbjct: 3 KNVSEVMTSNPITVKTDTPLREAIKILAEKRISGLPVVDDAGHLIGIISETDLM 56
>gi|428223589|ref|YP_007107686.1| putative signal transduction protein [Geitlerinema sp. PCC 7407]
gi|427983490|gb|AFY64634.1| putative signal transduction protein with CBS domains [Geitlerinema
sp. PCC 7407]
Length = 153
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ D V+ + +A++ L +KRI+G PV+D KLVGV+S+ DL+ +S
Sbjct: 4 TVADVMTR--DPITVQPDAPLKDAIQILADKRISGLPVVDQSGKLVGVISETDLMWRES- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + R L K G+ VG++M+ P+ + + L +AAR+L
Sbjct: 61 -GVTPPAYIMLLDSVIYLENPARYDRDLHKALGQSVGEVMSRDPVTISPDKTLGEAARIL 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPV+D ++VG++TRG+VVRA
Sbjct: 120 HERSVHRLPVIDDQHRIVGILTRGDVVRA 148
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+ V D+MT P+ V + L+DA ++L + + LPVVD GKLVG+I+ +++
Sbjct: 2 ARTVADVMTRDPITVQPDAPLKDAIQILADKRISGLPVVDQSGKLVGVISETDLM 56
>gi|218248686|ref|YP_002374057.1| hypothetical protein PCC8801_3960 [Cyanothece sp. PCC 8801]
gi|257061751|ref|YP_003139639.1| hypothetical protein Cyan8802_4005 [Cyanothece sp. PCC 8802]
gi|218169164|gb|ACK67901.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
gi|256591917|gb|ACV02804.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
Length = 153
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + V T + EA+ L EKRI+G PV+DD KLVGV+S+ DL+ + +
Sbjct: 5 VADVMTP--NAITVTRQTPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLMWQE--T 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + + + ++ + K G+ VG++M+ P+ + + +L +AA+++
Sbjct: 61 GVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMSNHPISIKSSQSLREAAQIMH 120
Query: 195 ETKYRRLPVVDGYGK-LVGLITRGNVVRA 222
E K RRLPVVD GK ++G++T+G+++R+
Sbjct: 121 EKKIRRLPVVDETGKQVIGILTQGDIIRS 149
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K+V D+MTP + V T L +A R+L E + LPVVD GKLVG+I+ +++
Sbjct: 3 KIVADVMTPNAITVTRQTPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLM 56
>gi|282899529|ref|ZP_06307493.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
gi|281195408|gb|EFA70341.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
Length = 152
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV MT + V T + +A++ L EK+++G PV+DD KLVG++S+ DL+ ++
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + +R L K G+ VG++M+ P+ + + +L+ AA+++
Sbjct: 61 -GITPPAYIMFLDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKTAAKII 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ K RRLPVVD G ++G++TRG+++R
Sbjct: 120 QDHKVRRLPVVDDAGTVIGILTRGDIIR 147
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V +MT P++V+ T L+ A ++L E + LPVVD GKLVG+I+ +++
Sbjct: 3 KTVAQVMTHNPIMVNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLM 56
>gi|166364594|ref|YP_001656867.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
gi|166086967|dbj|BAG01675.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
Length = 155
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ +
Sbjct: 2 TKTVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 60 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 117
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G+ITRG+++R
Sbjct: 118 LMYDRHVRRLPVIEEETHKVIGIITRGDIIR 148
>gi|113475881|ref|YP_721942.1| signal transduction protein [Trichodesmium erythraeum IMS101]
gi|110166929|gb|ABG51469.1| putative signal transduction protein with CBS domains
[Trichodesmium erythraeum IMS101]
Length = 153
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
VK T + EA++ L EK I+G PV+DD+ KLVG+VS+ DL+ +S G + +
Sbjct: 17 VKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQES--GVTPPPYIMLLDS 74
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ ++ + K G+ V ++MT PL L A+L+ E RLPVVD
Sbjct: 75 IIFLENPGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHRLPVVDEN 134
Query: 208 GKLVGLITRGNVVRA 222
GK++G++TRG+++RA
Sbjct: 135 GKVIGILTRGDIIRA 149
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K+V ++M+ P+ V T L++A ++L E LPVVD GKLVG+++ +++
Sbjct: 4 KIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLM 57
>gi|425444260|ref|ZP_18824315.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|425454352|ref|ZP_18834098.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
gi|389730388|emb|CCI05322.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|389804998|emb|CCI15532.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
Length = 155
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ +
Sbjct: 2 TKTVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 60 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 117
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G+ITRG+++R
Sbjct: 118 LMYDRHVRRLPVIEEETHKVIGIITRGDIIR 148
>gi|425466366|ref|ZP_18845667.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
gi|389831135|emb|CCI26307.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
Length = 170
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ +
Sbjct: 17 TKTVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE 74
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 75 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 132
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G+ITRG+++R
Sbjct: 133 LMYDRHVRRLPVIEEETHKVIGIITRGDIIR 163
>gi|425440870|ref|ZP_18821165.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
gi|389718595|emb|CCH97477.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
Length = 170
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ +
Sbjct: 17 TKTVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE 74
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 75 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 132
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G+ITRG+++R
Sbjct: 133 LMYDRHVRRLPVIEEETHKVIGIITRGDIIR 163
>gi|422302415|ref|ZP_16389778.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
gi|159028228|emb|CAO88038.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389788411|emb|CCI16008.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
Length = 155
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ +
Sbjct: 2 TKTVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 60 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 117
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G++TRG+++R
Sbjct: 118 LMYDRHVRRLPVIEEETHKVIGIVTRGDIIR 148
>gi|425434032|ref|ZP_18814504.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|425451953|ref|ZP_18831772.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|425458721|ref|ZP_18838209.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
gi|389678231|emb|CCH92908.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|389766445|emb|CCI07898.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|389825055|emb|CCI25515.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
Length = 155
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ +
Sbjct: 2 TKTVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 60 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 117
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G++TRG+++R
Sbjct: 118 LMYDRHVRRLPVIEEETHKVIGIVTRGDIIR 148
>gi|425468697|ref|ZP_18847691.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
gi|389884638|emb|CCI35074.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
Length = 170
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 89/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T T+ D MT + V T++ EA++ L EKR +G PV+DD +L+GV+S+ DL+ +
Sbjct: 17 TKTIADIMTP--NPITVTANTSLSEAVKILAEKRFSGLPVVDDKMRLIGVISETDLMWQE 74
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 75 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 132
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G+ITRG+++R
Sbjct: 133 LMYDRHVRRLPVIEEETHKVIGIITRGDIIR 163
>gi|428770480|ref|YP_007162270.1| signal transduction protein [Cyanobacterium aponinum PCC 10605]
gi|428684759|gb|AFZ54226.1| putative signal transduction protein with CBS domains
[Cyanobacterium aponinum PCC 10605]
Length = 152
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVG+ MT + VK T + EA+ LVE +I+G PVI + +LVG++S+ DL+ ++
Sbjct: 4 TVGEVMTP--NPITVKPETPLKEAIALLVEHKISGMPVIKEGGELVGILSESDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + N + + K G+ V D+M+ P+ + +++AA+LL
Sbjct: 61 -GVEPPPYIMILDSIIYLQNPNRYDKEIHKALGQTVADVMSDKPITISSTKTIKEAAQLL 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + RRLPVVD K++G++T+G+++RA
Sbjct: 120 HQKQIRRLPVVDSDKKIIGILTQGDIIRA 148
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K VG++MTP P+ V T L++A LL+E K +PV+ G+LVG+++ +++
Sbjct: 3 KTVGEVMTPNPITVKPETPLKEAIALLVEHKISGMPVIKEGGELVGILSESDLM 56
>gi|307153353|ref|YP_003888737.1| hypothetical protein Cyan7822_3520 [Cyanothece sp. PCC 7822]
gi|306983581|gb|ADN15462.1| CBS domain containing protein [Cyanothece sp. PCC 7822]
Length = 153
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 89/152 (58%), Gaps = 5/152 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TVGD MT + + V T + EA++ + EK+I+G PV+++ LVGV+S+ DL+ +
Sbjct: 2 TKTVGDVMT--HNPYTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + ++ + K G+ VG++M+ P+ + L +AA+
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMSDKPISIKAYQPLREAAQ 117
Query: 192 LLLETKYRRLPVVDG-YGKLVGLITRGNVVRA 222
L+ + K RRLPV+D K++G+ITRG+++RA
Sbjct: 118 LMHDKKIRRLPVIDETEAKVIGIITRGDIIRA 149
>gi|434399856|ref|YP_007133860.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
gi|428270953|gb|AFZ36894.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
Length = 153
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 88/150 (58%), Gaps = 4/150 (2%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT + + T + EA++ L E +I+G PV+D+ KLVGV+S+ DL+ +
Sbjct: 2 TKTVADVMTSSPIV--ITPQTALKEAIKILAEHKISGLPVVDEAGKLVGVLSETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ G + + + + ++ + K G+ V ++M+ P+ + + ++++AA
Sbjct: 60 T--GVDPPPYIMLLDSVIYLQNPARYEKEIHKALGQTVAEVMSDRPITIKPHQSVKEAAH 117
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L+ E + RRLPV+D + +VG+IT+G+++R
Sbjct: 118 LMHEKRIRRLPVIDEHNHIVGIITQGDIIR 147
>gi|16331252|ref|NP_441980.1| photosystem I assembly protein [Synechocystis sp. PCC 6803]
gi|383322995|ref|YP_005383848.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326164|ref|YP_005387017.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492048|ref|YP_005409724.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437316|ref|YP_005652040.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|451815408|ref|YP_007451860.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|1001427|dbj|BAA10050.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|339274348|dbj|BAK50835.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|359272314|dbj|BAL29833.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275484|dbj|BAL33002.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278654|dbj|BAL36171.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961369|dbj|BAM54609.1| photosystem I assembly protein [Bacillus subtilis BEST7613]
gi|451781377|gb|AGF52346.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
Length = 155
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
+ TVG+ MT VK T + +A+ L E RI+G PV+DD KLVGV+SD DL+ +
Sbjct: 2 SRTVGEVMTPNP--ITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVISDTDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
SG + + + + +R L K G+ VG++M P+ + L +AA
Sbjct: 60 --SGVDTPPYVMLLDSIIYLQNPARHERELHKALGQTVGEVMNDVPISILPTQTLREAAH 117
Query: 192 LLLETKYRRLPVVDGYGK-LVGLITRGNVVRA 222
L+ E K RRLPV++ + L+G++T+G+++RA
Sbjct: 118 LMNEKKIRRLPVLNVESRQLIGILTQGDIIRA 149
>gi|390437672|ref|ZP_10226201.1| IMP dehydrogenase [Microcystis sp. T1-4]
gi|389838870|emb|CCI30323.1| IMP dehydrogenase [Microcystis sp. T1-4]
Length = 155
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 88/151 (58%), Gaps = 5/151 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV MT V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ +
Sbjct: 2 TKTVAHIMTPNPI--TVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + ++LL K G+ VG++MT P+ + + L++AA
Sbjct: 60 --TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAAS 117
Query: 192 LLLETKYRRLPVVDGY-GKLVGLITRGNVVR 221
L+ + RRLPV++ K++G+ITRG+++R
Sbjct: 118 LMYDRHVRRLPVIEEETHKVIGIITRGDIIR 148
>gi|354566510|ref|ZP_08985682.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
gi|353545526|gb|EHC14977.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
Length = 155
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 22/160 (13%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V D MT D VK T +V+ L L E I+G PV+D+ K+VGVVS+ DLL +
Sbjct: 5 TRQVKDLMTT--DPVTVKPTDSVETVLRCLEENHISGLPVVDETGKVVGVVSEADLLFRE 62
Query: 132 ---------SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE 182
S GG + + + L K+ G +V D+MTP P+ +
Sbjct: 63 RPVRLPLYLSFLGGI-----------IYLEPLDHFVQQLKKSLGILVQDVMTPDPITIAP 111
Query: 183 NTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + AA L+LE + RLPVVD G LVG+ITR +++RA
Sbjct: 112 DAPISQAADLMLEKRVNRLPVVDETGALVGIITRDDLLRA 151
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 164 TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
T + V DLMT P+ V ++E R L E LPVVD GK+VG+++ +++
Sbjct: 3 TETRQVKDLMTTDPVTVKPTDSVETVLRCLEENHISGLPVVDETGKVVGVVSEADLL 59
>gi|186470615|ref|YP_001861933.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184196924|gb|ACC74887.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 231
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV EA +RLV+ RI+G PV+D LVG+VS+ DL L + G + S + V S
Sbjct: 19 TVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDL--LHRVETGTETRRSRWLEVFS--- 73
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
T +L K +G+ V D+MT + L V + D A L+ + +R+PV+ G GKL+G
Sbjct: 74 TTRDLASTFVKEHGRSVADVMTASVLTVDWQMPVADIADLMERRRIKRVPVMRG-GKLIG 132
Query: 213 LITRGNVVRA 222
++TRGN++RA
Sbjct: 133 IVTRGNLIRA 142
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MTP+ + + +++AA+ L++ + +PVVD G LVG+++ G+++
Sbjct: 5 DVMTPSVICAQPDMTVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDLL 54
>gi|261402855|ref|YP_003247079.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261369848|gb|ACX72597.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 158
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 84/142 (59%), Gaps = 9/142 (6%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN- 146
VK + E ++ EKRI+G PV++DD +LVG++S+ D++ +++ +++ + P+
Sbjct: 17 VKDNDDLTEVIKLFREKRISGAPVLNDDGELVGIISESDIIK--TLTTHDEDLNLILPSP 74
Query: 147 ---VNSTWKT---FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
+ KT E + L K V D+MT +V + + DAA+L++E K +R
Sbjct: 75 LDLIELPLKTAIKIEEFKEDLKKALKTKVKDVMTKDVVVAKPDMTINDAAKLMVEHKIKR 134
Query: 201 LPVVDGYGKLVGLITRGNVVRA 222
LPVVD GKL+G+ITRG+++ A
Sbjct: 135 LPVVDEDGKLIGIITRGDIIEA 156
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
V D MTK D+ K T+++A + +VE +I PV+D+D KL+G+++ D++
Sbjct: 103 VKDVMTK--DVVVAKPDMTINDAAKLMVEHKIKRLPVVDEDGKLIGIITRGDII 154
>gi|15678671|ref|NP_275786.1| hypothetical protein MTH644 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621725|gb|AAB85149.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 157
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN-- 139
+ D+ VK T+++ +A L E RI+G PV+D+D KLVG++S+ D++ L + + N
Sbjct: 9 QSDVITVKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMRLIEVHSPSLNLI 68
Query: 140 ---DTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
L ++E+ R + K V ++MTP + V + ++ DAA L+
Sbjct: 69 MPSPLDLLELPLRMKHEYDEIARGIRKAAVMRVEEIMTPKVVTVPPHASVSDAAELMERH 128
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+RLPV+D G+L G+ITRG+++ A
Sbjct: 129 DIKRLPVIDENGRLAGIITRGDIIGA 154
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
V D M + V +++ DAAR+L E + PVVD GKLVG+I+ G+++R
Sbjct: 4 VKDAMQSDVITVKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMR 56
>gi|22299345|ref|NP_682592.1| hypothetical protein tll1802 [Thermosynechococcus elongatus BP-1]
gi|22295528|dbj|BAC09354.1| CBS domain protein [Thermosynechococcus elongatus BP-1]
Length = 156
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 18/158 (11%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V D+MT + + EA+ + EK++ G PV+DD KLVG+VS+ DL+
Sbjct: 2 TALVRDYMTPNP--FTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIV-- 57
Query: 132 SISGGNQNDTSLFPNVNSTW-------KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
+ L P + T+ ++ + L KT G+ V D+MTP P ++ +
Sbjct: 58 -------REAPLEPPLYITFLGSIIYFESPESFHQHLKKTLGQQVQDVMTPNPHTINVDA 110
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +AARL++ RLPV++ G+LVG+I+R +++RA
Sbjct: 111 PISEAARLMVNHHISRLPVLNDQGELVGIISRHDLLRA 148
>gi|428773730|ref|YP_007165518.1| hypothetical protein Cyast_1914 [Cyanobacterium stanieri PCC 7202]
gi|428688009|gb|AFZ47869.1| CBS domain containing membrane protein [Cyanobacterium stanieri PCC
7202]
Length = 153
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT V T + EA+ L EK+++G PV+D + KLVGV+S+ DL+ ++
Sbjct: 4 TVADIMTPSP--ITVNPDTPLKEAITILAEKKLSGLPVVDKNNKLVGVISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + N ++ + K G+ VG++MT + + + +++ AA++L
Sbjct: 61 -GVEPPPYIMILDSVIYLQNPNRYEKEIHKALGQTVGEVMTNKAITIKSDDSVKRAAQIL 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E K RLPVVDG G +VG++T+G++++A
Sbjct: 120 HEKKIGRLPVVDGNGNVVGIVTQGDIIQA 148
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
K V D+MTP+P+ V+ +T L++A +L E K LPVVD KLVG+I+
Sbjct: 3 KTVADIMTPSPITVNPDTPLKEAITILAEKKLSGLPVVDKNNKLVGVISE 52
>gi|428315835|ref|YP_007113717.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
gi|428239515|gb|AFZ05301.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
Length = 166
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+++ L + ++EA++ L ++RI+G PV+D++ LVGV+S+ DL+ +S
Sbjct: 17 TVADVMSREPIL--ARPEMPLNEAIKILADRRISGLPVVDENDLLVGVISETDLMWRES- 73
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + + +R L K G+ VG+ M+ P+ + + ++ +AA+L+
Sbjct: 74 -GVTPPAYIMVLDSVIYLENPSRYERELHKALGQTVGEAMSTDPVTIGPDKSVPEAAKLM 132
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPVVD GK++G++TRG+++R+
Sbjct: 133 HDRSIHRLPVVDSAGKVIGILTRGDIIRS 161
>gi|334118778|ref|ZP_08492866.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
gi|333459008|gb|EGK87623.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
Length = 166
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+++ L + ++EA++ L +RI+G PV+D++ LVGV+S+ DL+ ++
Sbjct: 17 TVADVMSREPIL--ARPEMPLNEAIKILANRRISGLPVVDENDLLVGVISETDLMWRET- 73
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + + +R L K G+ VG+ M+ P+ + + ++++AA+L+
Sbjct: 74 -GVTPPAYIMVLDSVIYLENPSRYERDLHKALGQTVGEAMSKEPITIGPDKSVQEAAKLM 132
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPVVD GK++G++TRG+++R+
Sbjct: 133 HDRSIHRLPVVDSAGKVIGILTRGDIIRS 161
>gi|254410111|ref|ZP_05023891.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183147|gb|EDX78131.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 156
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + M++ D V T + EA++ L E+RI+G V++D KLVG++S+ DLL +
Sbjct: 4 TVAEVMSR--DPITVSPQTPIREAMKILAERRISGLLVVNDVGKLVGIISETDLLWQQT- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + + L K G+ VG++MT AP+VV + L AA+L+
Sbjct: 61 -GVEPPVYIVFLDSVIYLENPARYEEELHKALGQTVGEVMTHAPVVVKPDQPLRKAAKLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+ RRL V D GK++G++T G++VRA +
Sbjct: 120 QDKSLRRLAVTDNQGKVIGVLTAGDIVRAMI 150
>gi|304570678|ref|YP_001805580.2| hypothetical protein cce_4166 [Cyanothece sp. ATCC 51142]
gi|354552638|ref|ZP_08971946.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
gi|353555960|gb|EHC25348.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
Length = 153
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV MT ++ V T + EA++ L EK+I+G PV+DD KLVG++S+ DL+ +
Sbjct: 2 TKTVAQVMT--QNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + ++ + K G+ VG++M+ P+ + +L++AA
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAH 117
Query: 192 LLLETKYRRLPVVDGYG-KLVGLITRGNVVRAALQ 225
L+ E K RRLPV+D K++G++T+G+++R Q
Sbjct: 118 LMHEKKIRRLPVIDENNTKVIGILTQGDIIRTMAQ 152
>gi|218441822|ref|YP_002380151.1| hypothetical protein PCC7424_4929 [Cyanothece sp. PCC 7424]
gi|218174550|gb|ACK73283.1| CBS domain containing protein [Cyanothece sp. PCC 7424]
Length = 153
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TV D MT + + V T + EA++ + EK I+G PV++D LVGV+S+ DL+ +
Sbjct: 2 TKTVKDVMTP--NPYTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLMWQE 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+G + + + + + K G+ VG++M+ P+ V + L +AA+
Sbjct: 60 --TGVETPPYIMILDSVIYLQNPARYDKEIHKALGQTVGEVMSDKPITVKPDQPLREAAQ 117
Query: 192 LLLETKYRRLPVVD-GYGKLVGLITRGNVVRA 222
L+ + K RRLPV++ GK++G+IT G+++RA
Sbjct: 118 LMHDKKIRRLPVIESAQGKVIGIITSGDIIRA 149
>gi|443663854|ref|ZP_21133242.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
gi|443331736|gb|ELS46380.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
Length = 147
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ + +G + +
Sbjct: 8 VTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE--TGVEAPPYIMLLDS 65
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ + ++LL K G+ VG++MT P+ + + L++AA L+ + RRLPV++
Sbjct: 66 VIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEE 125
Query: 208 -GKLVGLITRGNVVR 221
K++G++TRG+++R
Sbjct: 126 THKVIGIVTRGDIIR 140
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
MTP P+ V NT+L +A ++L E ++ LPVVD +L+G+I+ +++
Sbjct: 1 MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 48
>gi|427414934|ref|ZP_18905121.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425755587|gb|EKU96452.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 173
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
Y V D MT VK V+ L+ L E I+G PV+DDD K+VGV+S+ DLL
Sbjct: 5 YLVKDLMTLNP--VTVKPFDLVETVLQHLEENHISGLPVVDDDGKVVGVISEADLLF--- 59
Query: 133 ISGGNQNDTSLFPNVNSTWKTF-----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
+ L +N F + ++ L KT G +V D+MT P+ + + +
Sbjct: 60 ----RERPIKLPLYLNFLGNFFYLEPPGKFKQQLRKTLGVLVQDVMTANPITIAPDMPIA 115
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
AA ++E + RLPV+D G+LVG+ITR ++++A
Sbjct: 116 TAANFMIEKRVNRLPVIDNQGQLVGIITREDLLKA 150
>gi|440752011|ref|ZP_20931214.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
gi|440176504|gb|ELP55777.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
Length = 147
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T++ EA++ L EKR +G PV+DD+ +L+GV+S+ DL+ + +G + +
Sbjct: 8 VTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE--TGVEAPPYIMLLDS 65
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ + ++LL K G+ VG++MT P+ + + L++AA L+ + RRLPV++
Sbjct: 66 VIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEE 125
Query: 208 -GKLVGLITRGNVVR 221
K++G++TRG+++R
Sbjct: 126 THKVIGIVTRGDIIR 140
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
MTP P+ V NT+L +A ++L E ++ LPVVD +L+G+I+ +++
Sbjct: 1 MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLM 48
>gi|171700533|gb|ACB53514.1| unknown [Cyanothece sp. ATCC 51142]
Length = 145
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%), Gaps = 3/139 (2%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T + EA++ L EK+I+G PV+DD KLVG++S+ DL+ + +G + +
Sbjct: 8 VTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE--TGVEPPPYIMILDS 65
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ ++ + K G+ VG++M+ P+ + +L++AA L+ E K RRLPV+D
Sbjct: 66 VIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLPVIDEN 125
Query: 208 G-KLVGLITRGNVVRAALQ 225
K++G++T+G+++R Q
Sbjct: 126 NTKVIGILTQGDIIRTMAQ 144
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
MT P+ V T L +A ++L E K LPVVD GKLVG+I+ +++
Sbjct: 1 MTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLM 48
>gi|411118891|ref|ZP_11391271.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
gi|410710754|gb|EKQ68261.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
Length = 156
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 5/149 (3%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ D + T +DE ++ L KRI+G PV+++D KLVG++S+ DL+ +
Sbjct: 4 TVADVMTR--DPITARPDTPLDEVIKTLAAKRISGLPVVNEDGKLVGIISETDLMWRE-- 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARL 192
SG + + + + +R L K G V D+MT +V + + +L DAA+L
Sbjct: 60 SGVTPPPYIMLLDSVIYLENPAKYERELHKALGSTVKDVMTDRHVVTIAPDKSLRDAAQL 119
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ E RLPV+D +++G++TRG+++R
Sbjct: 120 MHERGVHRLPVLDKEERVIGILTRGDIIR 148
>gi|298529782|ref|ZP_07017185.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511218|gb|EFI35121.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 157
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 79 MTKKEDLHA-----VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
MT EDL V T + EA+ L+EK I G PV+D + LVG++ DL+A+
Sbjct: 1 MTTAEDLMTSDPIRVHPETDISEAIHLLLEKNINGVPVVDQEDNLVGIICQSDLVAMQK- 59
Query: 134 SGGNQNDTSLFPNVNSTWK--TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
S+F ++S + ++ R + K V D MTP P+ V ++T LE+ A
Sbjct: 60 ---KIPLPSMFTVLDSILPLGSTAKMDREIKKIAATRVEDAMTPEPVAVKKDTPLEELAE 116
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++++ KY LPV +G GKLVG++ + +V++
Sbjct: 117 IMVDKKYHTLPVTEG-GKLVGVVGKSDVLK 145
>gi|220922314|ref|YP_002497616.1| hypothetical protein Mnod_2338 [Methylobacterium nodulans ORS 2060]
gi|219946921|gb|ACL57313.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 247
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MTK ++ +V+ +V+ A+ ++EKRI+G PV+D D +VG+VS+ DLLA +
Sbjct: 5 DIMTK--EVTSVRADLSVELAIALMLEKRISGLPVLDPDCAVVGIVSEGDLLARPELGTA 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
P + L ++ G+ VGD+MT + T L++ L+
Sbjct: 63 RPK-----PGWVQYLISPGRLAEAYARERGRRVGDVMTREVVTASPETPLDEIVDLMTRR 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA---ALQIKRDG 230
+ +R+P+V+G G+LVGL+TR +++R+ ALQ R+
Sbjct: 118 RIKRVPIVEG-GRLVGLVTRADLLRSLRRALQEAREA 153
>gi|116749632|ref|YP_846319.1| hypothetical protein Sfum_2202 [Syntrophobacter fumaroxidans MPOB]
gi|116698696|gb|ABK17884.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 152
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 17/156 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ D+ +V T + +A + L++K I G PVIDD LVG++ DL+A
Sbjct: 4 VADIMTR--DVISVSPQTEIVQAAKLLLDKHINGLPVIDDRGNLVGILCQSDLIA----- 56
Query: 135 GGNQNDTSLFPNVNSTWKTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
Q P+V + +F + ++ + K + VG+ MT P+ V +T +E+
Sbjct: 57 ---QQKRFPLPSVFNLLDSFIPLTSPSRFEKEVQKISAVTVGEAMTREPVTVSPDTTIEE 113
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
ARL++ LPVVDG KL+G+I + +V+R L
Sbjct: 114 VARLMVNKNLHTLPVVDG-NKLIGIIGKEDVLRTLL 148
>gi|186475859|ref|YP_001857329.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184192318|gb|ACC70283.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 230
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
TTV EA L EK I+G PV+DD +LVG+V++ DLL I G + ST
Sbjct: 18 TTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIGTGVNKRAWWLDFLAST- 76
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
EL K + V DLMT + V E+T + D A LL + +R+PVV GK+
Sbjct: 77 ---RELASEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRIKRVPVVKD-GKVT 132
Query: 212 GLITRGNVVRAALQI 226
GL++R N++RA I
Sbjct: 133 GLVSRANLIRALASI 147
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+MT + + H +T +++AAR L E +PVVD G+LVG++T G+++ A
Sbjct: 5 DVMTTSVVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRA 57
>gi|302867905|ref|YP_003836542.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315505690|ref|YP_004084577.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|302570764|gb|ADL46966.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315412309|gb|ADU10426.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 232
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T+ V D MT+ D+ V T E ++ LV +RI+G PV+D +++GV+S+ DLL
Sbjct: 3 TWQVTDVMTR--DVATVTEETPYREVVDVLVRQRISGVPVVDSFRRVLGVISEADLLHKV 60
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
SG T + K V DLMT + HE +L AR
Sbjct: 61 ERSGHPDERRVFEGRRRRTAR---------EKAGALVARDLMTAPAVTTHERASLAATAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L+ +RLPV+D G+L G++TRG+++R L+
Sbjct: 112 LMDHEAVKRLPVLDDLGRLAGIVTRGDLLRVHLR 145
>gi|443316995|ref|ZP_21046419.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
gi|442783400|gb|ELR93316.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
Length = 163
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ D V + + EA++ + ++RI+G PVI + LVG++S+ DL+
Sbjct: 4 TVADVMTR--DPITVGSNALLQEAIQIMADQRISGLPVISAEGSLVGILSETDLMW--QA 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE-NTNLEDAARL 192
+G + + K + L K G+ V ++M+ P+V + +L AA+L
Sbjct: 60 TGAPLPAYVMLLDSVIYLKNPTRFNQELHKALGQTVAEVMSDHPVVTTQPEASLRAAAQL 119
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ + + RRLPV+D G LVG++TRG++VR
Sbjct: 120 MHDKQVRRLPVLDDSGSLVGILTRGDIVR 148
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+ V D+MT P+ V N L++A +++ + + LPV+ G LVG+++ +++ A
Sbjct: 3 RTVADVMTRDPITVGSNALLQEAIQIMADQRISGLPVISAEGSLVGILSETDLMWQA 59
>gi|302867253|ref|YP_003835890.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|302570112|gb|ADL46314.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
Length = 234
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 89/162 (54%), Gaps = 15/162 (9%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T+ V D MT+ D+ +V+ T E ++ L E+ +T PV+D+ +++GVVS+ DL+
Sbjct: 3 TWQVQDVMTR--DVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKV 60
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G Q + + P+ + +K + DLMT P+ + + + +AAR
Sbjct: 61 EFLGQPQ-ERRILPD--------RHRREARAKAGATLAADLMTAPPVTITPDATIVEAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ----IKRD 229
L+ +RLPVV+ G+LVG++TRG++++ L+ I+RD
Sbjct: 112 LMDARGVKRLPVVNDLGRLVGIVTRGDLLKVHLRPDAGIRRD 153
>gi|268324813|emb|CBH38401.1| conserved hypothetical protein containing CBS domain pair
[uncultured archaeon]
Length = 160
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS-ISGGNQNDTS 142
D+ A K + V + E RI+G PVIDD K++GV+S+ D++ L + + + + +
Sbjct: 16 DVIAFKPSDKVHQVAETFRSNRISGAPVIDDQRKVIGVISEADIMKLTATVPFPDIDPLN 75
Query: 143 LFPNVNSTW------KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
FP + T K +E++ L + V D+MT P+ + + ++ DAARL+ +
Sbjct: 76 PFPVFSLTAYRKKVEKIPDEIETLFEGS----VKDVMTKDPVTISPDDSILDAARLMHKG 131
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ R+PVVD GKLVGLI R +++ +Q
Sbjct: 132 DFNRIPVVDDEGKLVGLIARADIIGLFVQ 160
>gi|359784555|ref|ZP_09287725.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
gi|359298179|gb|EHK62397.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
Length = 229
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT K + +V V E + L+E RI+ PV+DD+ +++G+VS+ DL+ + G
Sbjct: 5 DIMTPK--VISVGPDAEVREIAQLLLEHRISAVPVVDDERRVLGIVSEGDLMR--RVKGD 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ S + ++ + K E K++G+ ++MTP PL V ENT L ARLL +
Sbjct: 61 ERQGRSWWLSLFTGGKDPGEY----VKSHGRKAQEVMTPDPLCVEENTPLHTIARLLEKH 116
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PVV GKLVG+++R N+++
Sbjct: 117 HIKRVPVVR-EGKLVGIVSRANLLQG 141
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
D+MTP + V + + + A+LLLE + +PVVD +++G+++ G+++R +R G
Sbjct: 5 DIMTPKVISVGPDAEVREIAQLLLEHRISAVPVVDDERRVLGIVSEGDLMRRVKGDERQG 64
>gi|327400007|ref|YP_004340846.1| CBS domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327315515|gb|AEA46131.1| CBS domain containing protein [Archaeoglobus veneficus SNP6]
Length = 260
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 35/151 (23%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VGD+MTK ++ + TVDEA+E + + GFPV+DD K++G +S DLL D
Sbjct: 5 VGDYMTK--NVITLSPDNTVDEAIELIQKTGHDGFPVVDDSGKVIGYISSRDLLKKD--- 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
PN +GD+M+ V E +L DAAR++
Sbjct: 60 ----------PNTK--------------------IGDIMSKQLYVAREYMDLRDAARVMF 89
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
T + +LPVVD G+L+G+I+ +V+R+ ++
Sbjct: 90 RTGHSKLPVVDDDGRLLGIISNADVIRSQIE 120
>gi|359457519|ref|ZP_09246082.1| CBS domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 163
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT D + T ++++ ++ + + RI+G PV+D +VG++S+ DLL +S
Sbjct: 8 VKDFMTP--DPITISPTDSIEKVIKLIEDHRISGMPVVDASNHVVGIISEGDLLVRESPM 65
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
T L + +++ + + + K G +V D+MT P+ + L AA L+L
Sbjct: 66 QPPLYMTLLGSVIY--FESPKQFHQHMQKALGMLVQDVMTSQPITTKPDIPLTSAANLML 123
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K RLPVVD L+G+ITR ++VRA
Sbjct: 124 SKKINRLPVVDNDQYLIGIITRHDLVRA 151
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
VV D MTP P+ + ++E +L+ + + +PVVD +VG+I+ G+++
Sbjct: 7 VVKDFMTPDPITISPTDSIEKVIKLIEDHRISGMPVVDASNHVVGIISEGDLL 59
>gi|217076999|ref|YP_002334715.1| hypothetical protein THA_915 [Thermosipho africanus TCF52B]
gi|419759571|ref|ZP_14285865.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
gi|217036852|gb|ACJ75374.1| CBS domain containing membrane protein [Thermosipho africanus
TCF52B]
gi|407515391|gb|EKF50149.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
Length = 147
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--ALDS 132
V DF + D+ AV +V L+ L +++TG PVID+D+K+VG +S+ D++ AL S
Sbjct: 3 VKDFYIR--DITAVLEDESVSRVLKILSRQQVTGVPVIDEDYKVVGFISENDIIRAALPS 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
Q S P+ N+ R L K + + V ++MT + + E+T L AA L
Sbjct: 61 YFSLLQT-ASFIPD-------LNQFVRNLKKISNRAVSEIMTKPAITIKESTPLLHAADL 112
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
++ + LPVVD KL+G+ITR ++ A
Sbjct: 113 MIRHSLKILPVVDEDDKLLGVITRMKILEA 142
>gi|315506341|ref|YP_004085228.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|315412960|gb|ADU11077.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 234
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T+ V D MT+ D+ +V+ T E ++ L E+ +T PV+D+ +++GVVS+ DL+
Sbjct: 3 TWQVQDVMTR--DVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKV 60
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G + + P+ + +K + DLMT P+ + + + +AAR
Sbjct: 61 EFLG-QPRERRILPD--------RHRREARAKAGATLAADLMTAPPVTITPDATIVEAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ----IKRD 229
L+ +RLPVV+ G+LVG++TRG++++ L+ I+RD
Sbjct: 112 LMDARGVKRLPVVNDLGRLVGIVTRGDLLKVHLRPDAGIRRD 153
>gi|158333240|ref|YP_001514412.1| hypothetical protein AM1_0009 [Acaryochloris marina MBIC11017]
gi|158339481|ref|YP_001520658.1| hypothetical protein AM1_6410 [Acaryochloris marina MBIC11017]
gi|158303481|gb|ABW25098.1| CBS domain protein [Acaryochloris marina MBIC11017]
gi|158309722|gb|ABW31339.1| CBS domain protein [Acaryochloris marina MBIC11017]
Length = 163
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT D + T +++ ++ + + RI+G PV+D +VG++S+ DLL +S
Sbjct: 8 VKDFMTP--DPITISPTDSIERVIKLIEDHRISGMPVVDASNHVVGIISEGDLLVRESPM 65
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
T L + +++ + + + K G +V D+MT P+ + L AA L+L
Sbjct: 66 QPPLYMTLLGSVIY--FESPKQFHQHMQKALGMLVQDVMTSQPITTKPDIPLTSAANLML 123
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K RLPVVD L+G+ITR ++VRA
Sbjct: 124 SKKINRLPVVDNDQYLIGIITRHDLVRA 151
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
VV D MTP P+ + ++E +L+ + + +PVVD +VG+I+ G+++
Sbjct: 7 VVKDFMTPDPITISPTDSIERVIKLIEDHRISGMPVVDASNHVVGIISEGDLL 59
>gi|147678859|ref|YP_001213074.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274956|dbj|BAF60705.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
Length = 159
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 22/156 (14%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA---- 129
TV D MTK D++ +K T V + L K+ITG PV+D+ +LVG+++ D+L
Sbjct: 2 TVKDLMTK--DVYTIKDTDKVIDLLRLFERKKITGAPVVDNCNRLVGIITVGDILGRIYK 59
Query: 130 ----LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTN 185
D + DT N E+ +L GK+V +LMT + V E+T
Sbjct: 60 PVPLFDIMYYVAVLDTDAIVN--------GEIYDVL----GKLVSELMTRKVITVSEDTE 107
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
D A+++ ++++LPVVD KL+G+I+RG +VR
Sbjct: 108 FADVAKIMSRHRFKKLPVVDSSNKLIGVISRGEIVR 143
>gi|218779499|ref|YP_002430817.1| hypothetical protein Dalk_1651 [Desulfatibacillum alkenivorans
AK-01]
gi|218760883|gb|ACL03349.1| CBS domain containing membrane protein [Desulfatibacillum
alkenivorans AK-01]
Length = 149
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT ++ ++K T + EA ++L+E RI G PV+D+D K+VG++ DL+ +
Sbjct: 4 VSDIMTT--EVISLKPDTDISEAAKQLLENRINGAPVVDEDGKVVGILCQSDLI----VQ 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
S F ++S ++ ++ + K V MT P+VV +T LED A L
Sbjct: 58 QKRFPVPSFFTLLDSVIPLVSQKHFEKEMEKMAAFKVSQAMTEKPVVVSPDTPLEDVAAL 117
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+++ K LPVVD GKLVG++ + +++R +
Sbjct: 118 MVDKKLHTLPVVDS-GKLVGVVGKEDILRTLM 148
>gi|416393971|ref|ZP_11686062.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
gi|357263398|gb|EHJ12414.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
Length = 153
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV MT +D V T + EA++ + EKRI+G PV+D+ KL+GV+S+ DL+ ++
Sbjct: 4 TVAQVMT--QDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLMWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + + + + K G+ VG++M+ P+ + +L++AA ++
Sbjct: 61 -GVEPPPYIMILDSVIYLQNPARHDKEIHKALGQTVGEVMSDKPISIKATQSLKEAAHIM 119
Query: 194 LETKYRRLPVVDGYG-KLVGLITRGNVVRAALQ 225
E K RRLPV+D ++G++T+G+++R Q
Sbjct: 120 HEKKIRRLPVLDENNTTVIGILTQGDIIRTMAQ 152
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V +MT P+ V T L +A +++ E + LPVVD GKL+G+I+ +++
Sbjct: 2 AKTVAQVMTQDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLM 56
>gi|52632000|gb|AAU85400.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 166
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS-I 133
V + MT D+ A K + ++ RI+G PVIDD K++G++S+ D++ L + +
Sbjct: 9 VKELMT--TDVIAFKPGEKIPHVVKAFRTNRISGAPVIDDQRKVIGIISEADIMKLTATV 66
Query: 134 SGGNQNDTSLFP--NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ + + FP +++S K ++ + V D+MT + + + ++ DAAR
Sbjct: 67 PFPDIDPLNPFPVFSLSSYMKKVKKIPDEIETLFEGYVKDVMTKKTVTISPDNSISDAAR 126
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVV 220
L+ + ++R+PVVD GKLVG+I RG+V+
Sbjct: 127 LMHKNDFKRIPVVDDEGKLVGVIARGDVI 155
>gi|427722542|ref|YP_007069819.1| putative signal transduction protein [Leptolyngbya sp. PCC 7376]
gi|427354262|gb|AFY36985.1| putative signal transduction protein with CBS domains [Leptolyngbya
sp. PCC 7376]
Length = 155
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 15/161 (9%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL---- 127
T TV + MT D VK T + EA++ LV+++++G PV+D + KLVG++S+ DL
Sbjct: 3 TKTVAEIMTA--DPVVVKKDTPLAEAIQLLVDRKVSGLPVVDQEMKLVGIISEGDLTWQE 60
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGD-LMTPAPLVVHENTNL 186
+D+ D+ ++ + + K E+ + L +T G+V+ D ++T AP N +
Sbjct: 61 TGVDTPPYIMLLDSVIY--LQNPAKHDKEIHKALGQTVGEVMSDKVVTIAP-----NKMV 113
Query: 187 EDAARLLLETKYRRLPVV-DGYGKLVGLITRGNVVRAALQI 226
+AA L+ E K RLPV+ K++G+IT+G+++RA Q+
Sbjct: 114 REAAHLMHEKKVGRLPVLASDSNKVLGIITQGDIIRAMAQV 154
>gi|150020570|ref|YP_001305924.1| signal transduction protein [Thermosipho melanesiensis BI429]
gi|149793091|gb|ABR30539.1| putative signal transduction protein with CBS domains [Thermosipho
melanesiensis BI429]
Length = 147
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 12/148 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--ALDS 132
V DF + D+ AV +V L+ L + ITG PV+++D+K+VG +S+ D++ AL S
Sbjct: 3 VKDFYIR--DITAVLEDESVSRVLKILSRQEITGVPVVNEDYKVVGFISENDIIRAALPS 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
Q S P+ N+ R L K + K V ++MT +V+ E+T L AA L
Sbjct: 61 YFSLLQT-ASFIPD-------LNQFVRSLKKISNKSVSEIMTKPAIVIKEDTPLLHAADL 112
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVV 220
++ + LPVVD +LVG+ITR ++
Sbjct: 113 MIRHSLKILPVVDDGERLVGVITRMRIL 140
>gi|71394085|gb|AAZ32124.1| CBS domain protein [uncultured euryarchaeote Alv-FOS5]
Length = 156
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 25/162 (15%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MTK D+ V + + ++ + +++I+G PV+++ KL+GVV+D D++
Sbjct: 4 VKDVMTK--DVVYVHDNEGIAKVIDIMKKRKISGLPVVNNSGKLIGVVTDGDII------ 55
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKT--------------NGKVVGDLMTPAPLVV 180
D FP + F+ ++RL+ +GKV D+MT P V
Sbjct: 56 --RSLDIPDFPTSAVSPPPFDFIERLIKVKMEEWDVERALEMWKSGKV-SDVMTKDPASV 112
Query: 181 HENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
H N ++E AA ++LE RLPVVD GKLVG++TR ++++A
Sbjct: 113 HMNDDVEKAADIMLEKNVHRLPVVDDDGKLVGIVTRLDLLKA 154
>gi|258405823|ref|YP_003198565.1| hypothetical protein Dret_1703 [Desulfohalobium retbaense DSM 5692]
gi|257798050|gb|ACV68987.1| CBS domain containing membrane protein [Desulfohalobium retbaense
DSM 5692]
Length = 148
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 17/157 (10%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT ++ V+ T + EA ++L+E I G PV+DD+ +LVG++ DL+
Sbjct: 3 TVADIMTT--NVITVQKDTPIGEAAKKLLENHINGVPVVDDEGRLVGILCQSDLI----- 55
Query: 134 SGGNQNDTSLFPNVNSTWKTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
Q P V + F ++++ + K V MTP P+ V +T+L
Sbjct: 56 ---TQQKNFPLPTVFTILDGFIPLSSMGQMEKQVQKIAATTVEQAMTPDPITVTADTDLN 112
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
AA L+++ + LPVVDG LVG++ + +V++ L
Sbjct: 113 QAASLMVDKNFHTLPVVDGE-TLVGVLGKEDVLKTLL 148
>gi|374984110|ref|YP_004959605.1| putative CBS domain-containing protein [Streptomyces
bingchenggensis BCW-1]
gi|297154762|gb|ADI04474.1| putative CBS domain protein [Streptomyces bingchenggensis BCW-1]
Length = 223
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + AV + E + + + R++ PV++ + ++VGVVS+ DLL +
Sbjct: 6 HQVSDVMTRT--VVAVGRDASFKEMVRTMGQWRVSAMPVLEGEGRVVGVVSEADLLPKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+S F +L+RL L+K +LM+ + VH L +AA
Sbjct: 64 FR-------------DSDPDRFEQLRRLPDLAKAGAVAAEELMSAPAVTVHAEATLAEAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
R++ + +RLPVVD GKL G+++RG++++ L+ D E
Sbjct: 111 RIMAVRQVKRLPVVDSEGKLQGIVSRGDLLKVFLRPDEDIE 151
>gi|163754304|ref|ZP_02161426.1| CBS domain protein, putative [Kordia algicida OT-1]
gi|161325245|gb|EDP96572.1| CBS domain protein, putative [Kordia algicida OT-1]
Length = 156
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 100/185 (54%), Gaps = 36/185 (19%)
Query: 43 LRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLV 102
++ F +R+V+A + N + + V D+MT+ +L K TV+E +++L+
Sbjct: 3 IKSFQGARKVQANSTN----------KAEAFKVSDYMTR--NLITFKPEQTVEEVIQKLI 50
Query: 103 EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLS 162
+ +I+G PV++D +L+G++S+ D + Q S + N+ N+++ ++
Sbjct: 51 QHKISGGPVVNDQNELIGIISEGDCI--------KQISDSRYYNMPF---EHNKIEAHMA 99
Query: 163 KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K + GDL N+ DAA +ETK RR P+V+ GKLVG I++ ++++A
Sbjct: 100 KNVETIDGDL------------NIFDAANKFIETKRRRFPIVEN-GKLVGQISQKDILKA 146
Query: 223 ALQIK 227
A+++K
Sbjct: 147 AMKLK 151
>gi|220925988|ref|YP_002501290.1| hypothetical protein Mnod_6174 [Methylobacterium nodulans ORS 2060]
gi|219950595|gb|ACL60987.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 246
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT E++ V+ ++ A+ ++EKRI+G PV+D D ++G+V++ DLLA +
Sbjct: 5 DIMT--EEVTGVRADLPLELAVALMLEKRISGLPVLDPDGAVIGIVTEGDLLARPELGTA 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
PN + L ++ G+ VGD+MT + +T L++ L+
Sbjct: 63 RPK-----PNWVQYLISPGRLAEAYARERGRQVGDVMTKEVVTASPDTPLDEIVDLMARR 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA---ALQIKRDG 230
+ +R+PVVD G+++G++TR +++RA AL+ R+
Sbjct: 118 RIKRVPVVD-KGRMIGIVTRADLLRALRRALEQAREA 153
>gi|295136416|ref|YP_003587092.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
gi|294984431|gb|ADF54896.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
Length = 155
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 26/153 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT L K V E +E L++ +I+G PV++D ++LVG++SD D +
Sbjct: 23 VEDYMT--SSLITFKRDQYVAEVMEALLKNKISGAPVVNDRYELVGIISDADCM------ 74
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
K +E + + + M+ V+H+N ++ D A+L
Sbjct: 75 -----------------KQISESRYFNMPIGDMKIENYMSTDVAVIHKNLSIFDCAQLFY 117
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
YRR PVV+ GKL+G+I+R +++ AAL+++
Sbjct: 118 NNSYRRFPVVEN-GKLIGMISRKDILCAALKLR 149
>gi|366163366|ref|ZP_09463121.1| putative signal transduction protein with CBS domains [Acetivibrio
cellulolyticus CD2]
Length = 149
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 21/151 (13%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD---------SIS 134
D+ A+K TTV+E L EK I+G PV+DD K++G+VS+ DLL D I
Sbjct: 10 DVIAIKKDTTVEEIAHLLSEKNISGVPVLDDSSKVIGMVSEKDLLYKDIEPHFPPVVEIL 69
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
GG +F + K +NE R L T + ++MT + + +T +E A L++
Sbjct: 70 GG-----LIFLK---SVKQYNEELRKLVATRAE---EIMTKKVVTIGPDTEVERIAELMI 118
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
E R+PVVD KLVG+I+R +V++ Q
Sbjct: 119 EKDINRIPVVDN-QKLVGIISRADVIKYISQ 148
>gi|329938560|ref|ZP_08287985.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
gi|329302533|gb|EGG46424.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
Length = 243
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 12/129 (9%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN----VNSTWKTFNE 156
L E R+ G PV+D+D +VGVVS+ DL +Q +T L W T
Sbjct: 30 LAEHRVGGLPVVDEDGHVVGVVSETDLTI-------HQAETRLVHEPPRGRRFAWLT-PR 81
Query: 157 LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
+R +K + + G+LMT + VH + +AAR ++ + RLPV+D G+LVG+++R
Sbjct: 82 ARRRTAKAHARTAGELMTTPAITVHAQDTVVEAARTMVRHQVHRLPVLDEEGRLVGIVSR 141
Query: 217 GNVVRAALQ 225
++VR L+
Sbjct: 142 HDLVRTFLR 150
>gi|389690008|ref|ZP_10179025.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589526|gb|EIM29814.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 230
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 16/152 (10%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D MT + V+ ++ E + L + I+G PV+ D+ +L+G+VS+ DL+ +
Sbjct: 3 TAADVMTTA--VITVRPEMSIHEIAKLLCDHHISGVPVVGDNGQLLGIVSEGDLIGHAGL 60
Query: 134 SGGNQNDTSLFPNVNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+G + S W+TF L + +K++G+ D+MT + V E T++ D
Sbjct: 61 AGEQRR---------SWWQTFLSGPKVLAQHYAKSHGRTASDVMTKEVVTVLETTSVADT 111
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
AR L + + +RLPV+ G+L+G++TR N+++
Sbjct: 112 ARALEQHRIKRLPVLRN-GRLIGIVTRSNLLQ 142
>gi|376001640|ref|ZP_09779503.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062573|ref|ZP_17051363.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
gi|375330027|emb|CCE15256.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406715908|gb|EKD11060.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
Length = 164
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 9/157 (5%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P TV D MT + + +A+ L + RI G PV+D+ KLVG +S+ D+
Sbjct: 5 PDTMAKTVADVMTPNP--LVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDI 62
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFN--ELQRLLSKTNGKVVGDLMTPAPLV-VHENT 184
+ S + ++S N ++ L K G+ VGD+M+ P++ + +
Sbjct: 63 IWQQS----GVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDC 118
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+L +AARL+ + + RLPV+DG KL+G++T G+++R
Sbjct: 119 SLSEAARLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 155
>gi|395777171|ref|ZP_10457686.1| hypothetical protein Saci8_45729 [Streptomyces acidiscabies 84-104]
Length = 222
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 15/157 (9%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG MT E +HAV T E L RI+G PV+D D K++GVVS+ DLLA +
Sbjct: 6 VGSVMTA-EVVHAVPDTP-FKEVARLLSRHRISGLPVVDGDDKVLGVVSETDLLARQA-- 61
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P + + +R +K + G LM+ P+ VH + + +AAR +
Sbjct: 62 ---------APVASGPARLTRAARRRTAKATARTAGQLMSGPPVTVHADDTIAEAARTMA 112
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
E + RLPV+D +LVG++TRG+++R L + DGE
Sbjct: 113 ERRVERLPVLDVEDRLVGIVTRGDLLRVFL--RPDGE 147
>gi|456392178|gb|EMF57521.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 230
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 70 NGT-YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
NGT +TV D MT + AV E + L ++R++ PV+D + ++VGVVS+ DLL
Sbjct: 2 NGTPHTVSDVMTYP--VAAVGREAGFKEIVRLLQDRRVSALPVLDGEGRVVGVVSEADLL 59
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNL 186
+ +S + +L+RL L+K G DLMT L +
Sbjct: 60 PKEEFR-------------DSDPDRYTQLRRLSDLAKAGGSTAADLMTSPALTTRPDATS 106
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AAR++ + +RLPVV+ G L G+++R ++++ L+
Sbjct: 107 AQAARIMAHARVKRLPVVNEQGMLEGIVSRADLLKVFLR 145
>gi|209527145|ref|ZP_03275658.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
gi|209492394|gb|EDZ92736.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
Length = 157
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + + +A+ L + RI G PV+D+ KLVG +S+ D++ S
Sbjct: 4 TVADVMTPNP--LVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQS- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFN--ELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAA 190
+ ++S N ++ L K G+ VGD+M+ P++ + + +L +AA
Sbjct: 61 ---GVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAA 117
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
RL+ + + RLPV+DG KL+G++T G+++R
Sbjct: 118 RLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 148
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MTP PLV+ + L DA LL + + LPV+D GKLVG I+ +++
Sbjct: 2 AKTVADVMTPNPLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
>gi|330816985|ref|YP_004360690.1| signal-transduction protein [Burkholderia gladioli BSR3]
gi|327369378|gb|AEA60734.1| signal-transduction protein [Burkholderia gladioli BSR3]
Length = 230
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT E +HA + ++ EA L + I+ PV+D D KLVG+VS+ DLL I G
Sbjct: 5 DVMTP-EVIHA-RPEMSIREAAALLAKHSISALPVLDSDGKLVGIVSEGDLLRRYEIGTG 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+++ + + S EL K + + V D+MT + V+E+T L D A +L
Sbjct: 63 DRHRSWWLQLLTSN----RELASEYVKEHERSVKDVMTAEVVTVYEDTPLADIAEVLERH 118
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +R+PV+ G++ G+++R N+VRA
Sbjct: 119 RIKRVPVMKN-GRMTGIVSRANLVRA 143
>gi|225174422|ref|ZP_03728421.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225170207|gb|EEG79002.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 148
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T+++ LVE RI+G PV+D + ++VG+V++ DL+ D + T F
Sbjct: 13 SVSQEATINDVAAILVEHRISGVPVVDKEQRVVGMVTEGDLIHQD-----KKLHTPAFLE 67
Query: 147 VNSTWKTFNELQRL---LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
+ QR+ L K V ++MT V E+T +ED A +++E + R+PV
Sbjct: 68 ILGGVIYLENPQRVAKDLEKMTATKVVEIMTRKVFTVKEDTPIEDIATMMVERQVNRVPV 127
Query: 204 VDGYGKLVGLITRGNVVRAAL 224
VD GKL G+++R ++V+A +
Sbjct: 128 VDAAGKLTGIVSRQDLVKAMV 148
>gi|347730925|ref|ZP_08864035.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347520431|gb|EGY27566.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 150
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T + EA +++++ G PV+D LVGV+ DL+A N +LF +
Sbjct: 15 VTPETGIAEAARIMIQRKFNGLPVVDAKGALVGVICQSDLIAQHK----KLNLPTLFTVL 70
Query: 148 NS--TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+ ++ ++L + K + VG MTP P+ V T +++ A L++++KY LPVVD
Sbjct: 71 DGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEVASLMVDSKYHTLPVVD 130
Query: 206 GYGKLVGLITRGNVVR 221
G G LVG+I + +V+R
Sbjct: 131 G-GTLVGVIGKEDVLR 145
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MT AP+ V T + +AAR++++ K+ LPVVD G LVG+I + +++
Sbjct: 6 DIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDAKGALVGVICQSDLI 55
>gi|332711630|ref|ZP_08431561.1| putative signal-transduction protein [Moorea producens 3L]
gi|332349608|gb|EGJ29217.1| putative signal-transduction protein [Moorea producens 3L]
Length = 155
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + MT+ D V+ T + E ++ + E+ I+G PV+++ KLVGV+S+ DLL ++
Sbjct: 4 TVAEVMTR--DPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLLWQET- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +F + + + L K G+ G++MT P+ + + L AA+L+
Sbjct: 61 -GVEPPVYIMFLDSVIYLENPARYDQELHKALGQTAGEVMTGHPMSIKPDQPLRKAAKLM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E LPV D +++G+++ G++VRA
Sbjct: 120 QEKSIHHLPVTDEAEQVIGILSSGDIVRA 148
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V ++MT P+VV T +++ +++ E LPVV+ GKLVG+I+ +++
Sbjct: 2 AKTVAEVMTRDPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLL 56
>gi|409991489|ref|ZP_11274746.1| signal transduction protein [Arthrospira platensis str. Paraca]
gi|291567536|dbj|BAI89808.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|409937646|gb|EKN79053.1| signal transduction protein [Arthrospira platensis str. Paraca]
Length = 157
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + + +A+ L + RI G PV+D+ KLVG +S+ D++ S
Sbjct: 4 TVADVMTPNP--LVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQS- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFN--ELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAA 190
+ ++S N ++ L K G+ VGD+M+ P++ + + +L +AA
Sbjct: 61 ---GVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAA 117
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
RL+ + + RLPV+DG KL+G++T G+++R
Sbjct: 118 RLMNQKQVHRLPVLDGSKKLIGILTCGDIIR 148
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K V D+MTP PLV+ + L DA LL + + LPV+D GKLVG I+ +++
Sbjct: 2 AKTVADVMTPNPLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56
>gi|222100404|ref|YP_002534972.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221572794|gb|ACM23606.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 215
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 86/159 (54%), Gaps = 23/159 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+ + + T+ +EAL+ + + +I V+ DD ++VG+V++ DLL
Sbjct: 3 VKDFMTR--NPITIAPETSFNEALKLMKQNKIKRLIVMKDD-RIVGIVTEKDLLYASPSK 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N W EL LLSK V ++MT + V+ENT +EDAAR++
Sbjct: 60 ATTLN----------VW----ELHYLLSKLK---VEEIMTKDVVTVNENTPIEDAARIME 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI---KRDG 230
E LPVVD GKLVG+IT+ ++ + ++I KR+G
Sbjct: 103 ERDISGLPVVDDAGKLVGIITQTDIFKVFVEIFGTKREG 141
>gi|290955610|ref|YP_003486792.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
gi|260645136|emb|CBG68222.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
Length = 244
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG MT D+ + T E L RI+G PVIDDD K++GV+S+ DL+ +
Sbjct: 6 VGSVMTT--DVVRAEYDTPFKEVARLLAGHRISGLPVIDDDEKVIGVISETDLM----VR 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLS-KTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
D P + R + K + G LMT P+ VH + + +AAR +
Sbjct: 60 QARTPDPYGQPRHRFPFAVLTRAARRQAVKAEARTAGRLMTEPPVTVHADDTIVEAARTM 119
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ RLPVVD +LVG++ R ++++ L+
Sbjct: 120 ARHRVERLPVVDEEERLVGIVCRRDLLQVFLR 151
>gi|282857772|ref|ZP_06266981.1| CBS domain protein [Pyramidobacter piscolens W5455]
gi|282584442|gb|EFB89801.1| CBS domain protein [Pyramidobacter piscolens W5455]
Length = 155
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
RN T M K DL AV TV++A+ L ++G PV+DD W+LVG +S+ D+L
Sbjct: 2 RNEMVTAEQLM--KRDLTAVMAEDTVEDAMHVLRSHSLSGVPVVDDQWRLVGFLSESDIL 59
Query: 129 --ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNL 186
L S D+ L+ K F S+ VV D M V TN+
Sbjct: 60 RSVLPSYLEILAQDSFLYGEHELLVKKF-------SQVRAGVVRDYMQACCQSVQPETNI 112
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+ A L+L K +RLPVV+G L+G+I R ++
Sbjct: 113 MNVADLMLRLKVKRLPVVEGR-LLMGIIDRSDLC 145
>gi|297617946|ref|YP_003703105.1| hypothetical protein Slip_1785 [Syntrophothermus lipocalidus DSM
12680]
gi|297145783|gb|ADI02540.1| CBS domain containing membrane protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 149
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MTK ++ V+ +V+E + L + RI+G PV+DD KLVGVV++ DL+ I
Sbjct: 5 DIMTK--EVITVRPEQSVEEVAKILADNRISGVPVVDDAGKLVGVVTESDLM----IKAR 58
Query: 137 NQN---DTSLFPNVN--STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ +LF ++ + + FNE L + V D+MT V E+T L D AR
Sbjct: 59 DLELPFYITLFDSIIFLQSPRRFNE---ELKRFTASKVKDIMTTQVAAVDEDTPLFDIAR 115
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L+ R+PVV GK+VG++TR +VVRA
Sbjct: 116 LMTAKSINRVPVVRD-GKVVGIVTRNDVVRA 145
>gi|218678132|ref|ZP_03526029.1| signal-transduction protein [Rhizobium etli CIAT 894]
Length = 201
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN---QNDTSLFPNVNS 149
+V A + + +++++G PV+DDD +L+GV+S+ DL+ +S G + D L P
Sbjct: 19 SVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIRRTELSSGAFVLKADMELGP---- 74
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209
+E K VGD+MTP PL + E+ L A L+ E +R+PV+ GK
Sbjct: 75 -----DERANAFVKRCAWRVGDVMTPDPLTIDEDAALSHVAELMQERGIKRIPVLRD-GK 128
Query: 210 LVGLITRGNVVRAALQIKRD 229
LVG+++R ++++ K D
Sbjct: 129 LVGIVSRADLLQVIYSAKPD 148
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 36/54 (66%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT + + + ++ AA+L+ + + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTTVVTLSPDNSVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|443243845|ref|YP_007377070.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
gi|442801244|gb|AGC77049.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
Length = 153
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 26/160 (16%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V DFMT+K L + E ++ L+++RITG PV+D + +LVG++SD DL+ +
Sbjct: 20 FQVKDFMTRK--LITFSPDQGITEVMDILLKQRITGGPVVDANNQLVGIISDTDLMHVIG 77
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
S + N+ ++V D M+ P + E ++ DAA
Sbjct: 78 --------ESRYHNM---------------PVGNRLVSDYMSLQPATIDEEADIFDAAAR 114
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
L+T +RR PV GKL+G I+R +V+ AA ++K D R
Sbjct: 115 FLKTGHRRFPVT-SEGKLIGQISRMDVIIAATKLKGDQWR 153
>gi|405983346|ref|ZP_11041652.1| hypothetical protein HMPREF9451_00742 [Slackia piriformis YIT
12062]
gi|404388952|gb|EJZ84033.1| hypothetical protein HMPREF9451_00742 [Slackia piriformis YIT
12062]
Length = 165
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 10/158 (6%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TVG M + D ++ T+ + + L+++ ++ PV+DDD +VG +SD D++
Sbjct: 3 TVTVGSIMER--DAYSCSAQATLKDVTKSLIDRGVSSLPVVDDDNHVVGFISDGDIMR-- 58
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNEL---QRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ S+F T +++ Q++LS V+ +L T L V EN ++
Sbjct: 59 --AIAEHKTRSIFSGGAPTMLYYDDETIEQKVLSLRERNVM-ELATRKVLCVTENQSVGR 115
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
A L + K+++LPV+D +G+LVG+I R +++R A ++
Sbjct: 116 VADTLAKKKFKKLPVIDEHGRLVGVIRRSSIMRYAFEL 153
>gi|256811333|ref|YP_003128702.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256794533|gb|ACV25202.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 154
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 95 DEALERLV----EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN---- 146
D+ LE ++ E +I+G PV++ D KLVG++S+ D++ +I +++ + P+
Sbjct: 16 DDDLEDVIKIFRENKISGAPVLNKDGKLVGIISESDIIK--TIVTHDEDLNLILPSPLDL 73
Query: 147 VNSTWKT---FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
+ KT E L K V D+MT +V + + DAA+L++E +RLPV
Sbjct: 74 IELPLKTALKIEEFMEDLKKALKTKVKDMMTKKVIVAKPDMTVNDAAKLMVEHNIKRLPV 133
Query: 204 VDGYGKLVGLITRGNVVRAAL 224
VD G L+G++TRG+++ A +
Sbjct: 134 VDDEGNLIGIVTRGDLIEALI 154
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++ D+M P+VV+E+ +LED ++ E K PV++ GKLVG+I+ ++++
Sbjct: 2 LIKDVMK-KPIVVYEDDDLEDVIKIFRENKISGAPVLNKDGKLVGIISESDIIK 54
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
V D MTKK + K TV++A + +VE I PV+DD+ L+G+V+ DL+
Sbjct: 99 VKDMMTKK--VIVAKPDMTVNDAAKLMVEHNIKRLPVVDDEGNLIGIVTRGDLI 150
>gi|338731014|ref|YP_004660406.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
gi|335365365|gb|AEH51310.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
Length = 148
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D M + DL AV T++ L+ + + ++G PV+ +D +++G + + D++ ++
Sbjct: 3 VSDVMVR--DLTAVTPDETIENVLKIMSSQLLSGVPVVSEDMRVIGFIGEDDIVK--AVV 58
Query: 135 GGN---QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G S P++N +K N ++ K V M LVV+EN NL A
Sbjct: 59 PGYFSLLQSASFLPDINQLFKNLNLIK-------DKPVSQFMRSPALVVNENANLMHVAD 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L+++ R + VVD +G+LVG++ R N+++A +
Sbjct: 112 LMIKNNVRVIAVVDDFGRLVGVVNRMNILQAVAE 145
>gi|448433394|ref|ZP_21585915.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
gi|445686407|gb|ELZ38731.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
Length = 399
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVGD MT +EDLH V +V E + R+ E+R TG+PVID D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAELMSRMFEERHTGYPVIDGD-ELVGMVTLEDA------ 307
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + + + D++ AP + A + +
Sbjct: 308 ------------------RSIREVERDAYRVDDVMATDVVAAAP-----EADALTALQTM 344
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVDG G+LVGLI+R +++ A I+ G
Sbjct: 345 QEHGVGRLPVVDGDGELVGLISRSDLMTAFNIIQTGG 381
>gi|453051719|gb|EME99218.1| putative CBS domain-containing protein [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 216
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVGD MT+ + AV T E L +++ PV+ + +++GVVS+ DLL +
Sbjct: 7 TVGDVMTRT--VVAVSAETPYKEIAGALARWKVSALPVLAGEGRVIGVVSEADLLVKEEY 64
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G + + +RL +K G+ DLM+ + VH + + +AAR
Sbjct: 65 KGREPS-------------AVDRPERLGDPAKAAGRTAQDLMSAPAITVHADAPVAEAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ +RLPVVD GKLVG+++R ++++ L+ D
Sbjct: 112 AMALRGVKRLPVVDAEGKLVGVVSRADILKVYLRADED 149
>gi|304314784|ref|YP_003849931.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588243|gb|ADL58618.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 156
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 10/142 (7%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
VK + + +A L E RI+G PV+DD+ KLVGV+S+ D++ L + + N L P+
Sbjct: 15 VKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMRLIEVHSPSLN--LLMPSP 72
Query: 148 NSTWK-------TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
+ ++E+ + + K V ++MT + VH + ++ DAA L+ +R
Sbjct: 73 LDLLELPVRMKHEYDEIAKGIRKAAMMRVEEIMTDRVVTVHPDASVSDAAELMDRHDIKR 132
Query: 201 LPVVDGYGKLVGLITRGNVVRA 222
LPVV+ +LVG+ITRG+++ A
Sbjct: 133 LPVVED-DELVGIITRGDIIGA 153
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
V D M + V N+ + DAAR+L E + PVVD GKLVG+I+ G+++R
Sbjct: 4 VKDAMQTEVITVKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMR 56
>gi|357419743|ref|YP_004932735.1| hypothetical protein Tlie_0905 [Thermovirga lienii DSM 17291]
gi|355397209|gb|AER66638.1| CBS domain containing protein [Thermovirga lienii DSM 17291]
Length = 157
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 75/148 (50%), Gaps = 20/148 (13%)
Query: 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
G M K DL A+ + +AL L +R++G PV+ DDW LVG +S+ D+L
Sbjct: 8 GSLMNK--DLTALSEDELIIDALHVLYSQRLSGVPVVRDDWVLVGFLSEKDIL------- 58
Query: 136 GNQNDTSLFPNVNSTWKTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
Q + V + TF N LQRL + K V DLMT P+ V +L
Sbjct: 59 --QGAVPTYLEVLAQ-STFLDDCEGNLLQRLCAMGKQK-VKDLMTKDPVYVTPEASLMTV 114
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRG 217
A L+L K +RLPVV GKLVG+I RG
Sbjct: 115 ADLMLRKKIKRLPVVQD-GKLVGIIDRG 141
>gi|219848345|ref|YP_002462778.1| hypothetical protein Cagg_1435 [Chloroflexus aggregans DSM 9485]
gi|219542604|gb|ACL24342.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 427
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TV MT D+ +V T V E + L+E+ + PVID D K+VG+V+D DLL
Sbjct: 118 LTVAHVMT--HDVVSVTVDTPVGEVVRLLIERGLRAMPVIDADRKVVGIVTDADLL---- 171
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV--VGDLMTPAPLVVHENTNLEDAA 190
Q S P ++ L+ + VG++MTP P + +L AA
Sbjct: 172 -----QRGVSQLPLHLQQLLPNDDRAAQLAAVASRPERVGEVMTPNPTTIPATASLAQAA 226
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++ + ++RLPVVD G+LVG+I+R ++++
Sbjct: 227 LVMTKNDHKRLPVVDNEGRLVGIISRSDLLQ 257
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--ALD 131
TVG+ M + D+ V T++ E L+R++ VID D +++G+VSD D+L A+
Sbjct: 279 TVGEVMAR--DVPVVTPDTSLSETLDRILSTPRRRAVVIDQDRRVIGIVSDGDILRRAMR 336
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+S G +++ + ++ L ++T V MT + V +T + A
Sbjct: 337 PVSPGLLQRFAMW--IGGGTRSPELALALQNQTAANV----MTSPVITVTPDTPITTAIE 390
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
++ + +RLPV+D G+LVG++ R ++ A L +R
Sbjct: 391 QMIAHRIKRLPVIDDQGRLVGMVGRAALLGALLSNER 427
>gi|218885382|ref|YP_002434703.1| hypothetical protein DvMF_0278 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756336|gb|ACL07235.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 150
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T + EA +++++ G PV+D LVGV+ DL+A N +LF +
Sbjct: 15 VTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLIAQHK----KLNLPTLFTVL 70
Query: 148 NS--TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+ ++ ++L + K + VG MTP P+ V T +++ A L++++KY LPVVD
Sbjct: 71 DGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEVASLMVDSKYHTLPVVD 130
Query: 206 GYGKLVGLITRGNVVR 221
G LVG+I + +V+R
Sbjct: 131 A-GSLVGVIGKEDVLR 145
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MT AP+ V T + +AAR++++ K+ LPVVDG G LVG+I + +++
Sbjct: 6 DIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLI 55
>gi|303284687|ref|XP_003061634.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456964|gb|EEH54264.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 256
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG+ MT + ++ + + V +ALE LV R +G PV+DDD ++VGV+S+YDL+
Sbjct: 91 VGNVMTPRANVSCARASDNVLDALEVLVSNRHSGVPVLDDDERVVGVISEYDLMVRIGRE 150
Query: 135 GGNQN--DTSLFPN----------VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE 182
G Q+ D +FP V W F +LQ + K V + M A +
Sbjct: 151 GKKQSEKDDGMFPKIGRCDEFGGAVKDMWSRFIDLQDRMEKAQVTTVREAMHDA-MTCTP 209
Query: 183 NTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
T L DA +L + R+ VVD K+ ++
Sbjct: 210 ETLLVDATDAMLNERRHRICVVDEDDKVRSIL 241
>gi|359393632|ref|ZP_09186685.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
gi|357970879|gb|EHJ93324.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
Length = 229
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT K + +V V E + L+ RI+ PV+DDD +++G+VS+ DL+ +
Sbjct: 5 DIMTPK--VVSVGPGAEVREIAQLLLNHRISAVPVVDDDHRVIGIVSEGDLMR--RVKND 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ + +S + ++ + K + K++G+ ++MTP P+ V ENT L AR+L +
Sbjct: 61 SDHGSSWWLSLFTGGKDAGDY----VKSHGRKAHEVMTPNPMTVEENTPLHTIARMLEKH 116
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV+ GKLVG+++R N+++
Sbjct: 117 HIKRVPVLRD-GKLVGIVSRANLLQG 141
>gi|409437045|ref|ZP_11264193.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408751277|emb|CCM75349.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 240
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+ + TV EA E ++ RI+G PV+DDD LVG++++ D L ++ Q + L +
Sbjct: 14 IGASCTVLEAAETMLTNRISGLPVVDDDGVLVGMITEGDFLRRHELNTERQR-SWLQSWL 72
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
S K +E R ++G+ V ++M +VV + L DA RL+ +RLPV+
Sbjct: 73 ASPGKIADEYVR----SHGRRVDEVMNARVVVVSPDAALSDAVRLMERNDIKRLPVISD- 127
Query: 208 GKLVGLITRGNVVRAALQIKRDGERST 234
G+LVGLI+R +++RA + ++ ST
Sbjct: 128 GRLVGLISRSDLLRALTKTEKPSAPST 154
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V + MT +P+ + + + +AA +L + LPVVD G LVG+IT G+ +R
Sbjct: 2 IVENAMTSSPITIGASCTVLEAAETMLTNRISGLPVVDDDGVLVGMITEGDFLR 55
>gi|408534336|emb|CCK32510.1| hypothetical protein BN159_8132 [Streptomyces davawensis JCM 4913]
Length = 243
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG--NQNDTSLFPNVNSTWKTFNELQ 158
L E RI+G PV+D D +++GV+S+ DLL + + S F + +T
Sbjct: 30 LGEHRISGLPVVDQDEQVIGVISETDLLVRQAETPDPYEPRKRSWFAGLTRQGRTRT--- 86
Query: 159 RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGN 218
+K + G LMT P+ VH + + +AAR + + + RLPV+D +LVG++TR +
Sbjct: 87 ---AKARARTAGGLMTEPPVTVHADDTIVEAARTMAQHRVERLPVLDEENRLVGIVTRRD 143
Query: 219 VVRAALQ 225
+++ L+
Sbjct: 144 LLKVFLR 150
>gi|421587439|ref|ZP_16032841.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
gi|403708085|gb|EJZ22890.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
Length = 257
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 6/135 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T +V EA + +++ RI+G PV+D + LVG+VS+ D L ++ +N L +
Sbjct: 31 VPTCCSVAEAAQLMLDNRISGLPVVDTNGALVGIVSEGDFLRRSELN-TQRNRPWLLDWL 89
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
S K E R T+G+ V ++MT + ++ DA RL+ +RLPVV+
Sbjct: 90 TSPGKIATEYVR----THGRRVDEVMTSPVSAIAPTASVSDAVRLMERYDIKRLPVVEN- 144
Query: 208 GKLVGLITRGNVVRA 222
GKLVG+I R +++RA
Sbjct: 145 GKLVGIIARSDLLRA 159
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%)
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ + L+ + +V +MT + V ++ +AA+L+L+ + LPVVD G LV
Sbjct: 3 RAHRRYEACLTMESKMLVQAIMTLPVITVPTCCSVAEAAQLMLDNRISGLPVVDTNGALV 62
Query: 212 GLITRGNVVR 221
G+++ G+ +R
Sbjct: 63 GIVSEGDFLR 72
>gi|170076975|ref|YP_001733613.1| hypothetical protein SYNPCC7002_A0347 [Synechococcus sp. PCC 7002]
gi|169884644|gb|ACA98357.1| CBS domain protein [Synechococcus sp. PCC 7002]
Length = 155
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 13/159 (8%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL---- 127
T TV + MT D VK ++ A+ LVEK+I+ PV+D KLVG++SD DL
Sbjct: 3 TKTVAEVMTP--DPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQE 60
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
+D+ D+ ++ + + K E+ + L G+ VG++M+ +H +
Sbjct: 61 TGVDTPPYIMLLDSVIY--LQNPAKHDAEIHKAL----GQTVGEVMSKKVYTIHPEKIVR 114
Query: 188 DAARLLLETKYRRLPVV-DGYGKLVGLITRGNVVRAALQ 225
+AA L+ E RLPV+ K++G+IT+G+++RA Q
Sbjct: 115 EAAHLMHEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQ 153
>gi|402848240|ref|ZP_10896505.1| putative CBS domain protein [Rhodovulum sp. PH10]
gi|402501566|gb|EJW13213.1| putative CBS domain protein [Rhodovulum sp. PH10]
Length = 180
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 9/148 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM+ A+ + EA + ++E R++G PV+D +LVG+VS++DLL S
Sbjct: 3 VRDFMSHPAV--AIAPDRPIAEAAQLMLEHRVSGLPVVDATGRLVGIVSEHDLLRRRS-- 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + P+ L + + + VGD+MT + V ++T+LE+A RL+
Sbjct: 59 ----NGATRRPHWLQLMTEGQALAQEPERFHALTVGDVMTTEVVAVSDDTSLEEAGRLIE 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+RLPV+ G+++G+++R +++RA
Sbjct: 115 VHGIKRLPVIRD-GRVIGVLSRADLLRA 141
>gi|333986774|ref|YP_004519381.1| CBS domain-containing membrane protein [Methanobacterium sp.
SWAN-1]
gi|333824918|gb|AEG17580.1| CBS domain containing membrane protein [Methanobacterium sp.
SWAN-1]
Length = 159
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
Query: 89 KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148
K+T + + + L + +I+G P++DDD K++G+VS+ D++ L + N + P+
Sbjct: 16 KSTDKIIDVAQSLRDNKISGAPIVDDDGKVIGIVSEGDIMRLIEVHSPQMN--LILPS-P 72
Query: 149 STW--------KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
W ++E+ + L ++G++MT + V + ++ D A L+ +R
Sbjct: 73 LDWIELPLRMKHEYDEITKGLKTAAKVLIGEIMTKKVVSVLPDASISDGAALMDSHDIKR 132
Query: 201 LPVVDGYGKLVGLITRGNVVRAALQ 225
LPVVD KLVG++TRG+++ A ++
Sbjct: 133 LPVVDADKKLVGIVTRGDIIGAMVR 157
>gi|302549200|ref|ZP_07301542.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302466818|gb|EFL29911.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 234
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T E L E RI+G PV+DDD K++GV+S+ DL+A + + G LF T
Sbjct: 12 TPFKEVARLLAEHRISGLPVVDDDEKVLGVISETDLMARQAEAPGPSGPRRLFRRPRWTP 71
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ R ++T G+ LM+ + VH + + +AAR++ + RLPVVD +LV
Sbjct: 72 GSRARQARAHARTAGQ----LMSRPAITVHGDASAVEAARVMAHHRVERLPVVDDEERLV 127
Query: 212 GLITRGNVVRAALQ 225
G++TR ++++ L+
Sbjct: 128 GIVTRRDLLQVFLR 141
>gi|378825222|ref|YP_005187954.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
gi|365178274|emb|CCE95129.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
Length = 222
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
+V +A ++E ++G PV+DD+ LVG++S+ DL+ + G ++
Sbjct: 19 SVRQAANVMLENHVSGIPVVDDEGHLVGIISEGDLIRRTELGIGA------IASLAEMAM 72
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
E K + VGD MT AP+ + E+ +L A+L+LE +R+PV G+LVG
Sbjct: 73 PAEERAGAYVKRSSWKVGDAMTSAPVTIDEDASLTQVAKLMLERGIKRIPVTRA-GELVG 131
Query: 213 LITRGNVVRAALQIKRD 229
+++R +++RA L K D
Sbjct: 132 IVSRADLLRAILIAKLD 148
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT A + V + ++ AA ++LE +PVVD G LVG+I+ G+++R
Sbjct: 2 LVKDVMTIAIVKVSPDNSVRQAANVMLENHVSGIPVVDDEGHLVGIISEGDLIR 55
>gi|347753627|ref|YP_004861192.1| CBS domain-containing membrane protein [Bacillus coagulans 36D1]
gi|347586145|gb|AEP02412.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
Length = 153
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 5/147 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM + D+ VK TT+ E L+ L RI G PV+D + KL+G++SD D++
Sbjct: 3 VKDFMIR--DVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMISDGDVIRFLQPK 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
D + VN + FNE +L+ + V + V + E+A R+L
Sbjct: 61 ARTVYDFYITIVVNE-QEDFNE--KLVHSLDFPVEKIMKRRELYTVRPEDDFENALRILA 117
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ +++LPVV+ G++VG+I+RG+++R
Sbjct: 118 KHHFKKLPVVNQAGRVVGVISRGDIMR 144
>gi|357040593|ref|ZP_09102379.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356394|gb|EHG04183.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 154
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 16/155 (10%)
Query: 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
GD MT D+ V T +++ L+E RI+G PV+DD KLVGVVS+ DL+
Sbjct: 5 GDIMTT--DVITVNTHDDLEKVARLLLEHRISGLPVVDDGGKLVGVVSEADLVF------ 56
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRL------LSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
Q P + + L+R + + + VG+LM+ V ++ D
Sbjct: 57 --QEKPVRTPFYVVIFDSPIYLERPNRFIEDIKRAIAQKVGELMSTNLYTVGPEASIRDV 114
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
A ++ E R+PVVD GKL+G+ITR ++++A+L
Sbjct: 115 ATIIAEKGVNRVPVVDVDGKLIGIITRQDIIKASL 149
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K GD+MT + V+ + +LE ARLLLE + LPVVD GKLVG+++ ++V
Sbjct: 2 KKAGDIMTTDVITVNTHDDLEKVARLLLEHRISGLPVVDDGGKLVGVVSEADLV 55
>gi|157363922|ref|YP_001470689.1| signal transduction protein [Thermotoga lettingae TMO]
gi|157314526|gb|ABV33625.1| putative signal transduction protein with CBS domains [Thermotoga
lettingae TMO]
Length = 148
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ D+ AV +V+ L + + ++G PV+ +D +++G +S+ D++ S
Sbjct: 3 VFDVMTR--DVTAVTKDESVENVLRIMSSQLLSGIPVVSEDMRVIGFISESDIIRATVPS 60
Query: 135 GGNQ-NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ S P++N + R K V + M+ P+VV+E+ NL A ++
Sbjct: 61 YFSLLQSASFIPDMN-------QFLRNAKLVKDKPVFEYMSSPPIVVNEHANLIHVADIM 113
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + +PVVD G+LVG+I R N+++AA++
Sbjct: 114 IRHNIKVIPVVDDLGRLVGMIGRTNILKAAME 145
>gi|86140967|ref|ZP_01059526.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
gi|85832909|gb|EAQ51358.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
Length = 153
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 84/153 (54%), Gaps = 26/153 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT K L +V + +++L++ RI+G PV++++++L+GV+S+ D + IS
Sbjct: 22 VSDYMTTK--LITFTPDQSVMDVMQKLIKHRISGAPVVNENYELLGVISEGD--CIKHIS 77
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
++ P N+T VG M + N N+ DAAR +
Sbjct: 78 DSRYHN---LPMDNAT------------------VGQNMAIDVETIDGNMNVFDAARFFI 116
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
E K+RR P+V+ GKLVG I++ +V++AAL+++
Sbjct: 117 ERKHRRFPIVEN-GKLVGQISQMDVIKAALKLR 148
>gi|441146167|ref|ZP_20964057.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620746|gb|ELQ83771.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 227
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 67 PPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
P +G +TV D MT + AV E + + + +++ PV++ + +++GVVS+ D
Sbjct: 9 PQEHGLHTVSDVMTHT--VVAVGRNAPFKEIVRMMEQWKVSALPVLEGEGRVIGVVSEAD 66
Query: 127 LLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENT 184
LL + +S F + +RL L+K G+LM+ + VH +
Sbjct: 67 LLPKEEFR-------------DSDPSRFEQRRRLEDLAKAGALTAGELMSAPAICVHADA 113
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L AAR++ +RLPV D G L G+I+R ++++ L+ D
Sbjct: 114 ALPQAARIMAVRHVKRLPVTDAQGLLQGVISRSDLLKVFLRPDAD 158
>gi|386837900|ref|YP_006242958.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098201|gb|AEY87085.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791192|gb|AGF61241.1| hypothetical protein SHJGH_1575 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 233
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT++ + A++T + + + E R++ PV+DD ++VGVVS+ DLL
Sbjct: 8 VSDVMTRR--VVALRTGAAFKDIVRAMREWRVSALPVLDDAGRVVGVVSEADLLRKQEYG 65
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
GG + W K + G+LMT + V + L AAR++
Sbjct: 66 GGGLD-----------WYGRARDLTGFRKADAATAGELMTAPAVTVPPDAGLAQAARIMA 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ +RLPVVD G L G+++R ++++ L+ +D
Sbjct: 115 RGEVKRLPVVDHAGMLKGIVSRSDLLKVFLRDDQD 149
>gi|456392579|gb|EMF57922.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 228
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 17/161 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + AV + +E + + R++ PV++ + +++GVVS+ DLL +
Sbjct: 9 HIVSDVMTQT--VVAVGRDAPFKQIVETMEQWRVSAMPVLEGEGRVIGVVSEADLLPKEE 66
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+D SL+ + RL ++K V G+LM+ + VH +T L AA
Sbjct: 67 F---RDSDPSLY----------EQRGRLSAIAKAGAVVAGELMSTPAVTVHPDTTLSQAA 113
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
R++ + +RLPVVD G L G+++R ++++ L+ D E
Sbjct: 114 RIMAVRRVKRLPVVDDVGMLQGIVSRADLLKVFLRSDDDIE 154
>gi|406927826|gb|EKD63787.1| cbs protein [uncultured bacterium]
Length = 149
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 10/152 (6%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T MTK +H+V T V ++++ + +T PV+D KL+G+V++ D+ A +
Sbjct: 3 TAKQIMTK--SIHSVNPTAAVKTIIQKMAKAGVTAIPVVDKKNKLLGIVTEADV-ATHEL 59
Query: 134 SGGNQNDTSLFPNV---NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ SL + +T K EL++ ++T DLMT + ++EN L++
Sbjct: 60 NPHTPRAISLLGGLIYLENTEKYNEELKKFCAQT----ASDLMTKEVITINENATLDEII 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
++ E + RLPV+D G L G++TR ++++A
Sbjct: 116 AIMQEKQVGRLPVIDEKGILKGIVTRTDIIKA 147
>gi|411006741|ref|ZP_11383070.1| CBS domain containing membrane protein [Streptomyces globisporus
C-1027]
Length = 247
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+TV D M+ AV + + + +E + E +++ PV+ + ++VGVVS+ DLL ++
Sbjct: 46 HTVSDVMSHAP--VAVGSHASYRQVVELMAEAKVSALPVLAGEGRVVGVVSEADLLHKEA 103
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
G P + F K+ +V DLM+ + VH + L +AAR+
Sbjct: 104 FRGSGP------PAAAQLDEAF--------KSAAVLVEDLMSSPAVTVHADAPLAEAARI 149
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ +RLPVV+ G L G+++RG++++ L+ D
Sbjct: 150 MARKHVKRLPVVNSEGMLEGVVSRGDLLKVFLRPDED 186
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + T F + +E + ++ V D+M+ AP+ V + + L+
Sbjct: 14 GAREGPTGPFRAPGGEQRLDSEQEEVIVSVTPHTVSDVMSHAPVAVGSHASYRQVVELMA 73
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVV 220
E K LPV+ G G++VG+++ +++
Sbjct: 74 EAKVSALPVLAGEGRVVGVVSEADLL 99
>gi|451948868|ref|YP_007469463.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
gi|451908216|gb|AGF79810.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
Length = 203
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M++ ++ +V TT + E R+ + I+G PV+DD+ K+VG+VS+ D L G
Sbjct: 64 DIMSR--NVVSVTETTPLLEVANRMADASISGVPVMDDNKKVVGIVSEQDFL-----KGL 116
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
N S V + + +S + GD+MT P+ + ENT L + ++ +
Sbjct: 117 NNGCKSFMAVVARCLQGLGGVDFSISM---GMAGDIMTRPPVTIKENTPLVEITEIMSKN 173
Query: 197 KYRRLPVVDGYGK-LVGLITRGNVVRAAL 224
K RLPV+D K +VG+++R ++VRA L
Sbjct: 174 KINRLPVLDQEEKVVVGIVSRDDLVRAQL 202
>gi|85373724|ref|YP_457786.1| hypothetical protein ELI_04485 [Erythrobacter litoralis HTCC2594]
gi|341615026|ref|ZP_08701895.1| CBS [Citromicrobium sp. JLT1363]
gi|84786807|gb|ABC62989.1| CBS [Erythrobacter litoralis HTCC2594]
Length = 147
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 27/133 (20%)
Query: 91 TTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150
+T+V EA +V+ PV+DD LVGV++D D+ A ++ G +DTS
Sbjct: 17 STSVREAANLMVKNDCGEIPVVDDSGTLVGVITDRDI-ACRCVADGKSSDTS-------- 67
Query: 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
V D+MT +P+ V +T+++D + + K RRLPVVD GK
Sbjct: 68 ------------------VEDVMTSSPITVTPDTSVDDCRSKMEDNKVRRLPVVDESGKC 109
Query: 211 VGLITRGNVVRAA 223
G++++ ++ R A
Sbjct: 110 CGIVSQADIARHA 122
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+MT P + +T++ +AA L+++ +PVVD G LVG+IT ++ A + DG+
Sbjct: 6 VMTSNPACCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVITDRDI---ACRCVADGK 62
Query: 232 RS 233
S
Sbjct: 63 SS 64
>gi|318041619|ref|ZP_07973575.1| CBS [Synechococcus sp. CB0101]
Length = 144
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN----DTS 142
+V TTT + EA++ + E I+G PV+D+ LVG +++ DL+ +S D
Sbjct: 7 SVSTTTPLQEAVKLMSEHHISGLPVVDESGALVGELTEQDLMVRESGFDAGPYVMLLDAV 66
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
++ W E+ ++L G VG+LM+ P +T L AAR L + +RL
Sbjct: 67 IYLRNPLNWD--KEVHQVL----GSTVGELMSKHPHHCSPDTQLPAAARQLHDRSTQRLF 120
Query: 203 VVDGYGKLVGLITRGNVVRA 222
V+D K VG++TRG+VVRA
Sbjct: 121 VLDAANKPVGVLTRGDVVRA 140
>gi|345011229|ref|YP_004813583.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344037578|gb|AEM83303.1| CBS domain containing membrane protein [Streptomyces violaceusniger
Tu 4113]
Length = 221
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
PR+ + V D MT + AV E + L + R++ PV++ + +++GVVS+ DL
Sbjct: 2 PRSA-HIVSDVMTHT--VVAVGREAPFKEIVRTLEQWRVSALPVLEGEGRVIGVVSEADL 58
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L + + + P++ ++K +LMT + VH + L
Sbjct: 59 LPKEEFRDSDPARVAQLPDLPG-----------IAKAGAVTADELMTSPAITVHASATLA 107
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+AAR++ + +RLPVVD G+L G+++R ++++ L+ D E
Sbjct: 108 EAARIMTHKRVKRLPVVDEEGRLEGIVSRADLLKVFLRPDDDIE 151
>gi|424894152|ref|ZP_18317729.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393183179|gb|EJC83217.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 83/158 (52%), Gaps = 15/158 (9%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + V +V +A + + +++++G PV+DDD +L+G++S+ DL+ +S
Sbjct: 3 VKDVMTTT--IVTVSPDNSVRQAAKLMADRQVSGIPVVDDDGRLIGLISEGDLIRRTELS 60
Query: 135 GGN---QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G + + L P +E K VGD+MTP P+ + E+ L A
Sbjct: 61 SGAFLLKAEMGLGP---------DERANAFVKRCAWRVGDVMTPNPVTIFEDAPLSRVAG 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L+ E +R+PV+ GKLVG+++R ++++ K D
Sbjct: 112 LMQEHGIKRIPVLRA-GKLVGIVSRADLLQVIYLAKPD 148
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT + V + ++ AA+L+ + + +PVVD G+L+GLI+ G+++R
Sbjct: 2 LVKDVMTTTIVTVSPDNSVRQAAKLMADRQVSGIPVVDDDGRLIGLISEGDLIR 55
>gi|310659366|ref|YP_003937087.1| CBS domain containing protein [[Clostridium] sticklandii]
gi|308826144|emb|CBH22182.1| CBS domain containing protein [[Clostridium] sticklandii]
Length = 150
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ++ V + +V++A++ L+E ITG PV+D+ ++G++++ DL+ GG
Sbjct: 5 DIMTP--NVITVSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMY----RGG 58
Query: 137 NQNDTSLFPNVNSTWKTFN--ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+S N + ++ L K G V D+MT +V+ ++ DAA L+
Sbjct: 59 EIKPPRYLAIFDSYIFIDNPSKFEKQLKKMTGMFVEDVMTTPVIVIEAEQSVPDAANLMT 118
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ K RLPV++ GKLVG+I+R +++++
Sbjct: 119 KHKVNRLPVIEE-GKLVGIISRRDIIKS 145
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
D+MTP + V ++ ++E A +LLLE LPVVD ++G+IT G+++ +IK
Sbjct: 5 DIMTPNVITVSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIK 61
>gi|325959819|ref|YP_004291285.1| hypothetical protein Metbo_2094 [Methanobacterium sp. AL-21]
gi|325331251|gb|ADZ10313.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
Length = 159
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 103 EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN-------DTSLFPNVNSTWKTFN 155
+ +I+G PV+D++ +VGV+S+ D++ L I N D P + ++ +
Sbjct: 29 DNKISGAPVVDENNHVVGVISEGDIMRLIEIHSPKINLILPAPLDLIELP-IKMKYE-LD 86
Query: 156 ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
E+ + K V+ +MT + V +T++ DAA+LL K +RLPV+D GKLVG+IT
Sbjct: 87 EVAEDMQKAGSTVIDQIMTKKIIKVKPDTSVIDAAKLLDSHKIKRLPVIDNDGKLVGIIT 146
Query: 216 RGNVVRAALQ 225
RG+++ + ++
Sbjct: 147 RGDIIASMVR 156
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+ G+ + MTKK + VK T+V +A + L +I PVID+D KLVG+++ D++
Sbjct: 94 KAGSTVIDQIMTKK--IIKVKPDTSVIDAAKLLDSHKIKRLPVIDNDGKLVGIITRGDII 151
Query: 129 A 129
A
Sbjct: 152 A 152
>gi|451946413|ref|YP_007467008.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
gi|451905761|gb|AGF77355.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
Length = 203
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 54 AFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVID 113
++ H +TNS+ R D M++ ++ +V T + EA +R+ I+G PV+D
Sbjct: 48 SYQHAMERLTNSILAR-------DIMSR--EVVSVAANTPLLEAAKRMAAASISGVPVLD 98
Query: 114 DDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLM 173
++ ++VGV+S+ D L + N++ S+ N + + + +V D+M
Sbjct: 99 NEERVVGVLSEQDF--LKDLGTNNRSFMSIITN------SLQGKGCVAVSSPERVAADIM 150
Query: 174 TPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG-KLVGLITRGNVVRAAL 224
+ P + ENT L + ++ + RLPV+D G K+VG+++RG++VR+ L
Sbjct: 151 SHPPFTIRENTPLGEITVIMSKNNINRLPVLDQQGEKIVGILSRGDIVRSQL 202
>gi|375011247|ref|YP_004988235.1| hypothetical protein [Owenweeksia hongkongensis DSM 17368]
gi|359347171|gb|AEV31590.1| CBS domain-containing protein [Owenweeksia hongkongensis DSM 17368]
Length = 151
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 26/154 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT K + + T+ + ++ L+EKRI+G PV+D D LVGV+S+ D L ++
Sbjct: 21 VRDFMTTK--ITTFQVDQTMHDVIQILIEKRISGGPVVDVDNHLVGVISEGDCLK-QAVK 77
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G N SL G V + M V N N+ DAA++ L
Sbjct: 78 GKYLNSPSL----------------------GATVSECMVTEVKTVSPNLNILDAAQMFL 115
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+ RR PVV+ GKL+G I++ ++++A +K
Sbjct: 116 HLRLRRFPVVE-EGKLLGQISQKDIMKAIHNLKE 148
>gi|210624234|ref|ZP_03294262.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
gi|210153128|gb|EEA84134.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
Length = 155
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 14/145 (9%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ VK TV + + L++ +I G PV+D+D K++G++S+ D+L +
Sbjct: 14 DVKTVKKDDTVSDVAKMLIQDKIGGLPVVDEDNKVIGIISETDILKKEKYIEP------- 66
Query: 144 FPNVNSTWK------TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETK 197
P V + + L++ L + V DLMT + VHE+ +D A ++++
Sbjct: 67 -PRVINFLQGLIFLDDMKNLEKDLKRIAAYKVEDLMTEDIVTVHEDDKFDDVANVMIKKS 125
Query: 198 YRRLPVVDGYGKLVGLITRGNVVRA 222
R+PVVD GK+ G+I R +++++
Sbjct: 126 INRVPVVDDDGKIKGIICRYDIIKS 150
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R Y V D MT ED+ V D+ +++K I PV+DDD K+ G++ YD++
Sbjct: 91 RIAAYKVEDLMT--EDIVTVHEDDKFDDVANVMIKKSINRVPVVDDDGKIKGIICRYDII 148
>gi|116753803|ref|YP_842921.1| signal transduction protein [Methanosaeta thermophila PT]
gi|116665254|gb|ABK14281.1| putative signal transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 158
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 11/141 (7%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+ + + + EA L E RI+G PV+D D +LVGV+S+ DLL L +S + P+
Sbjct: 13 SCQASDPIAEAARLLRENRISGMPVLDGD-ELVGVISESDLLRL--LSTEDDRGGLWLPS 69
Query: 147 VNSTWKT-------FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
++ + ++R L + V D+M+ P+ V + ++E+AA ++ + +
Sbjct: 70 PFEIFEIPVRDVIRWERMKRSLDEITKMRVADVMSRKPITVSPDASIEEAAAIMTKHRIN 129
Query: 200 RLPVVDGYGKLVGLITRGNVV 220
RLPVV+G +LVG++TRG+++
Sbjct: 130 RLPVVEG-SRLVGIVTRGDII 149
>gi|325001432|ref|ZP_08122544.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudonocardia sp. P1]
Length = 282
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 98/222 (44%), Gaps = 43/222 (19%)
Query: 14 RLNANGVINSVPHLQLP--ITVATPSHLSKRLRFFTVSREVKAFAHNGVGITNSVP---- 67
R+ G + VP +Q + V T S L + R + R+ A G GI+ +P
Sbjct: 89 RMRVYGELRLVPVVQRGGLLGVITRSDLLRARREGGMFRK-AARLFGGAGISGPLPEAMA 147
Query: 68 PRNG---------TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKL 118
PR + V D MT L AV +DEA E L+ R T PV+DDD +L
Sbjct: 148 PRGAGRVGGRPVSSLRVSDVMTDG-GLVAVPPGLALDEAAEVLLSYRYTAVPVVDDDDRL 206
Query: 119 VGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPL 178
+GVVS+ DL+A S GG +T V +MT
Sbjct: 207 LGVVSEADLMA-GSTYGGR-------------------------RTRASTVAGVMTYDVE 240
Query: 179 VVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
VH L DA +LL E +R +PVVD G LVG+I+R +++
Sbjct: 241 TVHPGDPLADAEQLLAERGFRVIPVVDDDGVLVGVISRSDLL 282
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERL-VEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TVGD MT E + V+ TT+V R+ V + PV+ L+GV++ DLL
Sbjct: 65 TVGDAMT--EQVVTVQATTSVSIVAHRMRVYGELRLVPVVQR-GGLLGVITRSDLLRARR 121
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQ-RLLSKTNGKVVG-----DLMTPAPLV-VHENTN 185
G + LF + + R + G+ V D+MT LV V
Sbjct: 122 EGGMFRKAARLFGGAGISGPLPEAMAPRGAGRVGGRPVSSLRVSDVMTDGGLVAVPPGLA 181
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
L++AA +LL +Y +PVVD +L+G+++ +++
Sbjct: 182 LDEAAEVLLSYRYTAVPVVDDDDRLLGVVSEADLM 216
>gi|289192110|ref|YP_003458051.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288938560|gb|ADC69315.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 154
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 103 EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN----VNSTWKTFNELQ 158
E +I+G PV++ D KLVG++S+ D++ +I N++ + P+ + +T +++
Sbjct: 28 ENKISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLILPSPLDLIELPLRTALKIE 85
Query: 159 RLLSKTNGKV---VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+ + V D+MT +V + + DAA+L++E +RLPVVD G L+G++T
Sbjct: 86 EFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVENNIKRLPVVDDEGNLIGIVT 145
Query: 216 RGNVVRAAL 224
RG+++ A +
Sbjct: 146 RGDLIEALI 154
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++ D+M P+VV+E+ +L D +L E K PV++ GKLVG+I+ ++V+
Sbjct: 2 LIKDIMK-KPIVVYEDDDLIDVIKLFRENKISGAPVLNKDGKLVGIISESDIVK 54
>gi|86360152|ref|YP_472041.1| hypothetical protein RHE_PC00107 [Rhizobium etli CFN 42]
gi|86284254|gb|ABC93314.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 240
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V + +V EA +++ RI+G PV+ + LVG+VS+ D L +S + + L +
Sbjct: 14 VTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLRRSELS-TERKRSWLLEWL 72
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
S+ + E R T+G+ V ++MT + +L DA RL+ + +RLPVV+G
Sbjct: 73 TSSGRIAAEYVR----THGRRVEEVMTAPVSAIAPTASLSDAVRLMERQEIKRLPVVEG- 127
Query: 208 GKLVGLITRGNVVRAALQ 225
G+LVG++ R +++RA Q
Sbjct: 128 GRLVGIVARSDLLRALSQ 145
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V +MT + V + ++ +AARL+L+ + LPVV G LVG+++ G+ +R
Sbjct: 2 LVQAIMTSPAITVTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLR 55
>gi|297583021|ref|YP_003698801.1| CBS domain-containing membrane protein [Bacillus selenitireducens
MLS10]
gi|297141478|gb|ADH98235.1| CBS domain containing membrane protein [Bacillus selenitireducens
MLS10]
Length = 154
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 22/161 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL----- 128
+V D MTK + +K T+V++ + L++ +G PV+DD+ L GVVS+ D++
Sbjct: 3 SVKDVMTK--EAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIKRASH 60
Query: 129 ----ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
A+ GG ++S K EL++ +S T +GDLM + H +
Sbjct: 61 IQSPAVLEFLGG-------LIYLDSPKKYMEELKQAMSLT----IGDLMKTEVITAHPDD 109
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
++E A +L +R PVVD GK++G+I+R ++++ Q
Sbjct: 110 SIEQIATKMLSKNIKRFPVVDEEGKVIGIISRRDIMKHLYQ 150
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
V D+MT + + +T++ED A+LLL+ + +PVVD G L G+++ G++++ A I+
Sbjct: 4 VKDVMTKEAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIKRASHIQ 62
>gi|352102837|ref|ZP_08959407.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
gi|350599688|gb|EHA15772.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--ALDSIS 134
D MT K + +V V E L+ RI+ PV+D + +++G+VS+ DL+ D
Sbjct: 5 DIMTPK--VVSVGPDAEVSEIARLLLHHRISAVPVVDAEHRVIGIVSEGDLMRRVEDDDG 62
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G +LF S K++G+ ++MTP P+ V ENT L ARLL
Sbjct: 63 HGRSWWLTLFAGGKSASDYV--------KSHGRKAHEVMTPNPMTVEENTPLHTIARLLE 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + +R+PVV GKLVG+++R N+++
Sbjct: 115 KHRIKRVPVVRD-GKLVGIVSRANLLQG 141
>gi|254381628|ref|ZP_04996992.1| CBS [Streptomyces sp. Mg1]
gi|194340537|gb|EDX21503.1| CBS [Streptomyces sp. Mg1]
Length = 214
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 16/153 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTV D MT A+ + E +E + + +++ PV++ + ++VGVVS+ DLL +
Sbjct: 6 YTVSDVMTHTA--VAIGREASYKEIVELMDQWKVSAVPVLEGEGRVVGVVSEADLLPKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
Q+D L ++ SK G + +LM+ + VH + L +AAR+
Sbjct: 64 F---RQDDPQLPGQLDEA-----------SKAGGVLAEELMSSPAVTVHPDATLAEAARI 109
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ +RLPVV+G G L G+++R ++++ L+
Sbjct: 110 MARKHVKRLPVVNGVGMLEGVVSRSDLLKVFLR 142
>gi|386844881|ref|YP_006249939.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105182|gb|AEY94066.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798171|gb|AGF68220.1| hypothetical protein SHJGH_8558 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 215
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 17/159 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + AV + +ER+ E +++ PV++ D +++GVVS+ DLL ++
Sbjct: 6 HRVSDVMTRA--VVAVSRKARFKDIVERMEEWKVSALPVLEGDGRVIGVVSEADLLPKEA 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ N + F ++ L L K +LM+ + VH + L +AA
Sbjct: 64 LRDSNPD-------------RFTPMRHLTDLDKAGAMSAEELMSTPAVTVHGDATLAEAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
R++ + +RLPVV+ G L G+++RG++++ L+ D
Sbjct: 111 RIMALRQVKRLPVVNAEGVLEGVVSRGDLLKVFLRPDND 149
>gi|337284850|ref|YP_004624324.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
gi|334900784|gb|AEH25052.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
Length = 486
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 34/138 (24%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ +K TV+ AL + + I G PV+DDD +VG+VS D+ + D
Sbjct: 101 EDIITIKPEETVEYALFLMEKNDIDGLPVVDDDGMVVGIVSKKDIASRD----------- 149
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
GK+V +LMT + V E+ +E+A R+++E + RLP
Sbjct: 150 -----------------------GKLVKELMTRDVITVPESVEVEEALRIMVENRIDRLP 186
Query: 203 VVDGYGKLVGLITRGNVV 220
VVD GKLVGLIT ++V
Sbjct: 187 VVDREGKLVGLITMSDLV 204
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 60 VGITNS--VPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK 117
VGI + + R+G V + MT+ D+ V + V+EAL +VE RI PV+D + K
Sbjct: 137 VGIVSKKDIASRDGKL-VKELMTR--DVITVPESVEVEEALRIMVENRIDRLPVVDREGK 193
Query: 118 LVGVVSDYDLLA 129
LVG+++ DL+A
Sbjct: 194 LVGLITMSDLVA 205
>gi|302339945|ref|YP_003805151.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
gi|301637130|gb|ADK82557.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
Length = 413
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV----N 148
+V E ++RLV++ + PV D +VG+V+ DL+ GG L +
Sbjct: 134 SVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMK----HGGMPIRLGLLSTLPKEER 189
Query: 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG 208
STW + K+N + + ++MTP P ++ + + +A L++ +RLPVVDG G
Sbjct: 190 STW---------MEKSNNRNLSEIMTPHPQTINADQKVSEALHLMVRKALKRLPVVDGNG 240
Query: 209 KLVGLITRGNVVR 221
KL G++ R +++R
Sbjct: 241 KLCGILARIDLLR 253
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D A+ + + EA++ L +K VID D LVG+V+D L+ + ++ +++
Sbjct: 285 DRLALPSHMPLREAIDILAQKAAQRAAVIDTDKHLVGLVTDSILMRVI-----DKKTSTI 339
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
P + LQ + +M + V E T++++A RL+ E +R+PV
Sbjct: 340 LPLRRFAARRAESLQ----------LSQVMKREVVRVTEETSVDEAIRLMTEQGLKRIPV 389
Query: 204 VDGYGKLVGLITRGNVVRA 222
VD GK G+I R +++ A
Sbjct: 390 VDAEGKFCGMIRRDSILIA 408
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 35/54 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT P+ H + ++ + + L++ + LPV D G +VG++T+G++++
Sbjct: 117 LVRDVMTEQPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMK 170
>gi|373857726|ref|ZP_09600466.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
gi|372452397|gb|EHP25868.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
Length = 158
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM ++ + K +TTV E + L RI G PV+DD LVG+VSD D++ S
Sbjct: 3 VRDFMIRR--IFTAKPSTTVKELISILETNRIGGVPVVDDKGNLVGIVSDGDIVRFLS-- 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPL-VVHENTNLEDAARLL 193
N+ L + S + +++ +L K + D+M + + + + E A RL+
Sbjct: 59 -PNKEKIYLAYYI-SYIEEAQKIEDVLRKRLNTPIEDIMVKKNIKTLAPDDDFESAIRLI 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVV 220
++++PVV+G G++VG+I+RG+++
Sbjct: 117 SRHHFKKIPVVNGAGRVVGIISRGDII 143
>gi|392382251|ref|YP_005031448.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
gi|356877216|emb|CCC98025.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
Length = 233
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 22/161 (13%)
Query: 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
D MT++ + + TV EA +R++E RI+G PV D + +L+GV+S+ DL L
Sbjct: 4 ADIMTRQ--VVTIGPDATVTEAAKRMLENRISGLPVCDSNGRLLGVISEGDL--LRRTET 59
Query: 136 GNQNDTSLF-------PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
G S + PN + + +K++G+ V D MT + + V E T L++
Sbjct: 60 GTVRRASWWLAMFAGAPNQAADY----------TKSHGRHVRDAMTESLISVTEETPLDE 109
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
RL+ + +R+PV++ GKLVG+++R N++ I D
Sbjct: 110 VVRLMEGNRIKRVPVLNN-GKLVGIVSRANLLHVLASIAPD 149
>gi|288574950|ref|ZP_06393307.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570691|gb|EFC92248.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 158
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 16/158 (10%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T D M++ DL AV + V +A+ L ++G PVIDDDW+LVG +S+ D+L
Sbjct: 3 TIIAEDIMSR--DLTAVMSQDRVFDAIHVLYSHGLSGLPVIDDDWRLVGYLSESDIL--- 57
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV----VGDLMTPAPLVVHENTNLE 187
+ + + + F + LL + G + V D M P+ V +T++
Sbjct: 58 ------KPTIPTYLEILAQSTFFGNEENLLFQRFGAMKNDLVKDFMQKDPVFVFPDTSIM 111
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
A ++L K++RLPV + GK +G+I RG ++
Sbjct: 112 TVADMMLRKKFKRLPVTEE-GKFIGIIDRGAFCEFLME 148
>gi|359794084|ref|ZP_09296808.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359249670|gb|EHK53253.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 214
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 84/146 (57%), Gaps = 7/146 (4%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ +V +V A + +++ RI+G PV+DD+ ++VG+V++ DL+ + G Q +L
Sbjct: 4 DVVSVSPNHSVRHAAQLMLDHRISGLPVLDDNGRVVGIVTEGDLMRRSEL--GVQ---AL 58
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
P + + T + R K++ V D+MT P+VV E T+L A L+ E + +PV
Sbjct: 59 AP-IGRQFTTSEDSARAYVKSHSWKVADVMTADPVVVDEGTSLTQIADLMTERGIKCVPV 117
Query: 204 VDGYGKLVGLITRGNVVRAALQIKRD 229
+ G L+G+++R +++R ++ K D
Sbjct: 118 MRGT-HLIGIVSRADLLRVLVKAKTD 142
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
MT + V N ++ AA+L+L+ + LPV+D G++VG++T G+++R
Sbjct: 1 MTADVVSVSPNHSVRHAAQLMLDHRISGLPVLDDNGRVVGIVTEGDLMR 49
>gi|398356193|ref|YP_006529520.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
gi|399995408|ref|YP_006575646.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|365182255|emb|CCE99105.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|390131440|gb|AFL54820.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
Length = 226
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT++ + A+ +V A ++E I+G PV+DD+ LVG++++ DLL
Sbjct: 5 DIMTRR--VIAISPEHSVKHAACVMLENHISGLPVLDDNESLVGILTEGDLL-------- 54
Query: 137 NQNDTSLFPNV-NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
L P T T E + K N VGD+MTP + V E+T ++ A +
Sbjct: 55 --RRAELGPAAWRGTGSTHEEAPEIFIKGNSWRVGDVMTPGVVTVDEDTPVDRIAAAMKT 112
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVR 221
+R+PVV G++VG+++RG+++R
Sbjct: 113 HDIKRVPVVRA-GQMVGIVSRGDILR 137
>gi|359791626|ref|ZP_09294471.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359252271|gb|EHK55537.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 220
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT D+ +V +V A +++ RI+G PVIDDD ++VG+V++ DL+ + G
Sbjct: 5 DVMTV--DVVSVSPDHSVRHAARIMLDHRISGLPVIDDDGRVVGIVTEGDLMRRSEL--G 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
Q +L P V+ + T K++ V D+MT P+ V E T L A L+ E
Sbjct: 61 AQ---ALAP-VDRQFSTEENNAGAYVKSHSWKVADVMTEDPVKVEEETPLPRIAALMAER 116
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
+R+PV+ G G LVG+++R ++R + K D
Sbjct: 117 GIKRVPVMRG-GHLVGIVSRAELLRVLITAKFDA 149
>gi|148656616|ref|YP_001276821.1| hypothetical protein RoseRS_2494 [Roseiflexus sp. RS-1]
gi|148568726|gb|ABQ90871.1| CBS domain containing protein [Roseiflexus sp. RS-1]
Length = 427
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 86/160 (53%), Gaps = 13/160 (8%)
Query: 63 TNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVV 122
+ ++ P TV D MT++ + +V+ T V E + L+++ + PV+D + +++G++
Sbjct: 109 SRAIGPFPAHLTVADVMTRQ--VVSVRPDTPVAEIVALLIDRALRSAPVVDAENRVIGII 166
Query: 123 SDYDLL--ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV 180
+D DLL + Q + SL +T +T T+ DLMTP P+ +
Sbjct: 167 TDGDLLTRGATELPLALQRELSLAERA-ATIETL--------ATHRHTAADLMTPNPVTL 217
Query: 181 HENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
E T L +AA ++ + +R+PVVD +LVG+++R +++
Sbjct: 218 RETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLL 257
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P TVG+ M D+ V+ T + E L+RL+E V+D + ++VG+++D D+
Sbjct: 275 PDGAPKTVGEIMIT--DVPTVQPDTPLAETLDRLLETDKRRVIVVDGERRVVGIITDGDV 332
Query: 128 L--ALDSISGGNQNDTSLFPNVNSTWKTFNELQR---LLSKTNGKVVGDLMTPAPLVVHE 182
+ A + G + W F R L G+ D+MT + +
Sbjct: 333 MRRAAKRVRPGALR-------ALAAW--FGGGARPPGLEVAAEGRTAADVMTSPVVTLPT 383
Query: 183 NTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
N + DA RL++ K +R+P++D G+LVG++ R V+ A
Sbjct: 384 NAPIADAVRLMMAHKIKRIPIIDADGRLVGMVGRAGVLAA 423
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+T D MT ++ TT + EA + ++ + PV+D +LVG+VS DLLA +
Sbjct: 204 HTAADLMTPNP--VTLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLLATVA 261
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
G Q + + KT E+ ++T P V +T L +
Sbjct: 262 -EGLRQRPATPIRQPDGAPKTVGEI--------------MITDVP-TVQPDTPLAETLDR 305
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
LLET RR+ VVDG ++VG+IT G+V+R A + R G
Sbjct: 306 LLETDKRRVIVVDGERRVVGIITDGDVMRRAAKRVRPG 343
>gi|189425586|ref|YP_001952763.1| hypothetical protein Glov_2529 [Geobacter lovleyi SZ]
gi|189421845|gb|ACD96243.1| CBS domain containing membrane protein [Geobacter lovleyi SZ]
Length = 149
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + MTK ++ V T TT+ E E V RI+ PV+D L+G+V++ DL+
Sbjct: 3 TVAEIMTK--EVLTVGTETTIRELAELFVTHRISSLPVVDAAGALIGIVTESDLV----- 55
Query: 134 SGGNQNDTSLFPNVNST--WKTFNE----LQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
Q+ + P V S W + E L++ L K G+ V D+ P + + +L
Sbjct: 56 ---EQSKSVHLPTVISLFDWVIYLESEKTLEKELKKMGGRTVADIYQPEAVSIAPTASLS 112
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+AA L+ +PV++ G+LVG++ R +++R L
Sbjct: 113 EAADLMSAHHTNAVPVLEN-GRLVGIVARIDIIRTLL 148
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
K V ++MT L V T + + A L + + LPVVD G L+G++T ++V
Sbjct: 2 KTVAEIMTKEVLTVGTETTIRELAELFVTHRISSLPVVDAAGALIGIVTESDLVE 56
>gi|170289451|ref|YP_001739689.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|170176954|gb|ACB10006.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
Length = 215
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 23/159 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+ + + T+ EAL+ + + +I V+ D+ K+VG+V++ DLL
Sbjct: 3 VKDFMTR--NPITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLYASPSK 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N W EL LLSK + ++MT + V+ENT +EDAAR++
Sbjct: 60 ATTLN----------IW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI---KRDG 230
E LPVVD G LVG+IT+ ++ + ++I KR+G
Sbjct: 103 EKDISGLPVVDDAGHLVGIITQTDIFKVFVEIFGTKREG 141
>gi|172065495|ref|YP_001816207.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171997737|gb|ACB68654.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 230
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
+V E + L E I+ PVID + KL+G+VS+ DL+ I + + + ST
Sbjct: 19 SVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVRRVEIGTHARRRSWWLELLAST-- 76
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
EL K + + V DLM+ + V E+T L + A LL + +R+PVVD GK+ G
Sbjct: 77 --RELASEYVKEHSQTVKDLMSVDVVTVAEDTPLSEVAELLERHRIKRVPVVDN-GKVAG 133
Query: 213 LITRGNVVRA 222
L++R ++VRA
Sbjct: 134 LVSRADLVRA 143
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
D+MT + ++++ A+LL E +PV+D GKL+G+++ G++VR
Sbjct: 5 DVMTTPVIFASPEMSVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVR 55
>gi|374576817|ref|ZP_09649913.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374425138|gb|EHR04671.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 242
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T++ EA ++++ ++G V+D KL+GVVS+ D + I G + L
Sbjct: 13 SVTPDTSIVEAANIMLKRHVSGLTVVDGAGKLIGVVSEGDFIRRSEIGTGRKRGRWLRFI 72
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ S K+ N+ +G+ V ++MTP+P+ + E+T L + L+ +RLPV+ G
Sbjct: 73 LGSG-KSANDFIH----EHGRKVSEVMTPSPVTISEDTALAEIVDLMERNNVKRLPVIHG 127
Query: 207 YGKLVGLITRGNVVRAALQIKRD 229
K+VG+++R N+++A + RD
Sbjct: 128 -DKIVGIVSRANLLQAVADLARD 149
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + + V +T++ +AA ++L+ L VVDG GKL+G+++ G+ +R
Sbjct: 6 IMTRSVISVTPDTSIVEAANIMLKRHVSGLTVVDGAGKLIGVVSEGDFIR 55
>gi|291279250|ref|YP_003496085.1| hypothetical protein DEFDS_0853 [Deferribacter desulfuricans SSM1]
gi|290753952|dbj|BAI80329.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 141
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 21/153 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL--DS 132
V D+MTK ++ + + + RL EK I+G PV+D + +VGV S+ DLLA D
Sbjct: 3 VKDYMTK--NVIVAYENENIRDVVLRLREKNISGVPVLDGNNNVVGVFSESDLLAQLPDI 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ Q P ++ EL KT +M P+ +HEN +L+ AA L
Sbjct: 61 LHEAEQ-----IPLID-----VKELTDAPVKT-------IMGKPPITIHENDSLKKAAEL 103
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L RLPV++ GKLVG+I+ G+V++A ++
Sbjct: 104 FLTKYIHRLPVLNDEGKLVGIISLGDVLKAFIE 136
>gi|302392835|ref|YP_003828655.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302204912|gb|ADL13590.1| CBS domain containing membrane protein [Acetohalobium arabaticum
DSM 5501]
Length = 148
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 17/151 (11%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ED+ V T+ + L + I+G PVI+DD ++VG++++ DL+ D
Sbjct: 5 DIMT--EDVITVNQDDTIKDVARLLSDNEISGLPVINDDGEVVGIITEQDLIIRDK---- 58
Query: 137 NQNDTSLFPN----VNST--WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
FP+ ++S ++ E + K G V ++MT + V++ T ++
Sbjct: 59 ----KLHFPDYIYLLDSIIYLESLREFEEEFKKMIGTQVEEVMTEEVITVNQETPTDEIV 114
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L+LE K R+PV+D G+LVG+I+RG++V+
Sbjct: 115 ELMLEHKINRVPVIDN-GELVGIISRGDLVK 144
>gi|377820772|ref|YP_004977143.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357935607|gb|AET89166.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 230
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 79/139 (56%), Gaps = 10/139 (7%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V + TTV E L++ RI+ PVID + +++G+VS+ DLL + I DT
Sbjct: 13 SVTSETTVHELALLLMQHRISAAPVIDANRRVIGMVSEGDLLHREEI------DTEKTQG 66
Query: 147 VNSTWKTFNELQRLLS---KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
S W R K++ + VG++MT P+ V+E+ +L + A +L + +R+PV
Sbjct: 67 RQSWWLEMLGTDRGAGDYIKSHARTVGEIMTREPVCVNEDASLANIASVLESRQIKRVPV 126
Query: 204 VDGYGKLVGLITRGNVVRA 222
+ G+LVG+++R N+V+A
Sbjct: 127 LRD-GRLVGIVSRSNLVQA 144
>gi|440746999|ref|ZP_20926260.1| CBS domain protein [Mariniradius saccharolyticus AK6]
gi|436484628|gb|ELP40604.1| CBS domain protein [Mariniradius saccharolyticus AK6]
Length = 152
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 68 PRNGT--YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDY 125
PRN T +V D MT +L + T+D+ L L K+I+G PV+D KLVG++S+
Sbjct: 13 PRNQTQPISVRDHMT--TNLITFRPDDTIDKVLVTLASKKISGAPVLDHSGKLVGIISEV 70
Query: 126 DLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTN 185
D L++ + G +T F + K+ D+MT +P +
Sbjct: 71 DCLSV--VIKGQYTNTPKFSAL----------------VEEKMTKDVMTLSP-----DIT 107
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
+ DAA+L LE K RR PVV GKL+G I+ +++R ++K
Sbjct: 108 IFDAAQLFLEHKIRRFPVVKD-GKLLGQISLSDIIRVFTKLK 148
>gi|209885943|ref|YP_002289800.1| transporter [Oligotropha carboxidovorans OM5]
gi|337740480|ref|YP_004632208.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386029497|ref|YP_005950272.1| hypothetical protein OCA4_c12510 [Oligotropha carboxidovorans OM4]
gi|209874139|gb|ACI93935.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
gi|336094565|gb|AEI02391.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336098144|gb|AEI05967.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 242
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V TT+ EA +++ I+G PV+D KLVGV+S+ D + I G Q
Sbjct: 13 SVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVRRVEI--GTQTK------ 64
Query: 147 VNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
+ W F G+ VG +M P P+ + E+TNLED RL+ + +RLP
Sbjct: 65 -RARWLAFFIGPGRAATEFVHERGRKVGVVMNPQPVTITEDTNLEDIVRLMEKHNIKRLP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKRD 229
VV +L+G++TR +++R + R+
Sbjct: 124 VVKDM-QLLGMVTRTDLLRTVASLDRE 149
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT P+ V E+T L +AA L+L+ LPVVD +GKLVG+I+ G+ VR
Sbjct: 6 IMTRNPVSVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVR 55
>gi|413961463|ref|ZP_11400691.1| putative signal transduction protein [Burkholderia sp. SJ98]
gi|413930335|gb|EKS69622.1| putative signal transduction protein [Burkholderia sp. SJ98]
Length = 212
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 74/123 (60%), Gaps = 7/123 (5%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV-NSTWKTFNELQR 159
LV+ RI+ PV+D D ++VG++S+ DLL + I +N S + ++ S + +
Sbjct: 8 LVQHRISAAPVVDQDERVVGMISEGDLLHREEIGTEKRNRRSWWLDMLGSDGGAADYI-- 65
Query: 160 LLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNV 219
K++ VG++MT P+ V E+T+L D A +L +R+PV+ G+LVG+++R N+
Sbjct: 66 ---KSHAPTVGEIMTREPICVKEDTSLADIAAVLESHHIKRVPVLRD-GRLVGIVSRSNL 121
Query: 220 VRA 222
V+A
Sbjct: 122 VQA 124
>gi|448746918|ref|ZP_21728582.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
gi|445565428|gb|ELY21538.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
Length = 236
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R T D MT K + +V V E + L++ RI+ PV+D + +++G+VS+ DL+
Sbjct: 4 RRSTMQAIDIMTPK--VVSVGPDAEVREIAQLLLKHRISAVPVVDSERRVIGIVSEGDLM 61
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ + + S + ++ + K + K++G+ ++MTP P+ V ENT L
Sbjct: 62 R--RVKSDSDHGHSWWLSLFTGGKDAGDY----VKSHGRKAHEVMTPNPMTVEENTPLHT 115
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
AR+L + +R+PV+ GKLVG+++R N+++
Sbjct: 116 IARMLEKHHIKRVPVLRD-GKLVGIVSRANLLQG 148
>gi|94266307|ref|ZP_01290010.1| CBS [delta proteobacterium MLMS-1]
gi|93453098|gb|EAT03574.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
+ MT+ ++ +VK V+E L EKRI+G PV+DDD KLVGV ++ DL+
Sbjct: 6 EIMTR--EVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI-------- 55
Query: 137 NQNDTSLFPNVNSTWKTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+Q P + + ++++ +SK G V D+ T P+ V T L++ A
Sbjct: 56 DQAKKFHIPTAITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELA 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++ E LPV++ G+LVG+I + +++R
Sbjct: 116 TIMAEKHLHTLPVLED-GQLVGVIGKADIIR 145
>gi|148270727|ref|YP_001245187.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281413032|ref|YP_003347111.1| hypothetical protein Tnap_1625 [Thermotoga naphthophila RKU-10]
gi|147736271|gb|ABQ47611.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281374135|gb|ADA67697.1| CBS domain containing protein [Thermotoga naphthophila RKU-10]
Length = 215
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 23/159 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+ + + T+ EAL+ + + +I V+ D+ K+VG+V++ DLL
Sbjct: 3 VKDFMTR--NPITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLYASPSK 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N W EL LLSK + ++MT + V+EN +EDAAR++
Sbjct: 60 ATTLN----------IW----ELHYLLSKLK---IEEIMTKNVVTVNENAPIEDAARIME 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI---KRDG 230
E LPVVD G+LVG+IT+ ++ + ++I KR+G
Sbjct: 103 EKDISGLPVVDDAGRLVGIITQTDIFKVFVEIFGTKREG 141
>gi|452851187|ref|YP_007492871.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451894841|emb|CCH47720.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 149
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 8/136 (5%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T V A L+E +I G PVID+ ++VGV+ DL+A S F ++ +
Sbjct: 19 TDVATAARTLIENKINGAPVIDN-GQVVGVLCQADLVA----QQKKVTLPSFFTLLDGVF 73
Query: 152 --KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209
+ EL+R + K + VG+ MTPAP+ + T +ED A ++ K LPV+D K
Sbjct: 74 PLSSHEELEREMKKISALTVGEAMTPAPIFISPETKMEDIATMMANEKLYTLPVLDD-DK 132
Query: 210 LVGLITRGNVVRAALQ 225
LVG++ + +V++ LQ
Sbjct: 133 LVGVVGKEDVLKTLLQ 148
>gi|334341079|ref|YP_004546059.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334092433|gb|AEG60773.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 158
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 5/139 (3%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
K+D++ V+ V + L+ VEK+++G PV+ D L G++++ D+L +
Sbjct: 9 KKDIYTVREEEKVHDLLKVFVEKQVSGVPVVGKDHTLAGIITEADILRQIHQPPSFIDFV 68
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
+ F ++S ++ +L++ V DLMT + V E T+L +++L K+++L
Sbjct: 69 NYFVVLDSDRVITGQIMEMLNRP----VKDLMTKDVITVDEETSLAKISQILSRRKFKKL 124
Query: 202 PVVDGYGKLVGLITRGNVV 220
PVVDG KLVG+I R +V+
Sbjct: 125 PVVDG-QKLVGVINRSDVI 142
>gi|374287258|ref|YP_005034343.1| hypothetical protein BMS_0457 [Bacteriovorax marinus SJ]
gi|301165799|emb|CBW25371.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 153
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 12/151 (7%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V +FMTK D+ + TV+EA + + +K + PV+D LVG++++ D + D+
Sbjct: 7 VSEFMTK--DVISCTEENTVEEAAKIMHDKGFSVMPVVDGAGALVGILTESDFVGTDA-- 62
Query: 135 GGNQNDTSLFPNVNSTWKT---FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
N ++ + F++ + + K+ K +G++MT V + +L D
Sbjct: 63 ----NIPHALASIKKLFGQNFYFSDAEEIYKKSKAKKLGEVMTKDVTTVTSDQSLSDVIS 118
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
++ +RLPVVDG GKLVG+ITR ++++A
Sbjct: 119 VMSHNHLKRLPVVDG-GKLVGIITRKDLLKA 148
>gi|94270649|ref|ZP_01291791.1| CBS [delta proteobacterium MLMS-1]
gi|93450722|gb|EAT01796.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
+ MT+ ++ +VK V+E L EKRI+G PV+DDD KLVGV ++ DL+
Sbjct: 6 EIMTR--EVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI-------- 55
Query: 137 NQNDTSLFPNVNSTWKTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+Q P + + ++++ +SK G V D+ T P+ V T L++ A
Sbjct: 56 DQAKKFHIPTAITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELA 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++ E LPV++ G+LVG+I + +++R
Sbjct: 116 TIMAEKHLHTLPVLED-GQLVGVIGKADIIR 145
>gi|399911758|ref|ZP_10780072.1| hypothetical protein HKM-1_18687 [Halomonas sp. KM-1]
Length = 231
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 8/146 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT + + V T V E L+E I+ PV++DD K++G+VS+ DL+ + G
Sbjct: 5 DVMTPR--VITVSPETDVREIARLLLEHNISALPVVEDDGKVLGIVSEGDLMR--RVENG 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ S + + S + N + K++ + ++MTP P+ + E+ L A+LL +
Sbjct: 61 TERRKSWW--LKSIFAGANNASEYI-KSHARKAHEIMTPNPITIDEDEPLHRVAKLLEKH 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PVV GKLVG+++R N++R
Sbjct: 118 HIKRVPVVRD-GKLVGIVSRANLLRG 142
>gi|242279465|ref|YP_002991594.1| hypothetical protein Desal_1995 [Desulfovibrio salexigens DSM 2638]
gi|242122359|gb|ACS80055.1| CBS domain containing membrane protein [Desulfovibrio salexigens
DSM 2638]
Length = 149
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T V A + ++EK + G PV+D KL+GV+ DL+A Q T P++ +
Sbjct: 19 TDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLVA--------QQKTISMPSLFTIL 70
Query: 152 KTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
F +L++ ++K V MTP P+ + +T++E A L++E K+ LPVV+
Sbjct: 71 DGFISFSSNEDLEKEVNKIAATKVEHAMTPDPITIEPDTSIEKIADLMVERKFYTLPVVE 130
Query: 206 GYGKLVGLITRGNVVR 221
GKLVG++ + +V++
Sbjct: 131 N-GKLVGVVGKEDVLK 145
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MT L + +T++ AA+L+LE LPVVD GKL+G++ + ++V
Sbjct: 6 DIMTSGALTLEPDTDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLV 55
>gi|307726495|ref|YP_003909708.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307587020|gb|ADN60417.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 229
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ++ +V T+ E VEKRI+G PV+D D +VG++S+ DLL I
Sbjct: 5 DVMTG--NVISVTPDMTIREVARLFVEKRISGAPVLDPDGSVVGMISEGDLLRRSEIGTD 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ S W +E R KT+G V D+MT + V +T L + A +L
Sbjct: 63 ERRRVSWL----DFWSASHE-ARDYVKTHGTKVSDVMTTDVITVEPDTLLGEVAAILETR 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV + G+LVG+++R N+V+A
Sbjct: 118 GIKRVPVTEA-GRLVGIVSRANLVQA 142
>gi|15643897|ref|NP_228946.1| hypothetical protein TM1140 [Thermotoga maritima MSB8]
gi|418044700|ref|ZP_12682796.1| CBS domain containing protein [Thermotoga maritima MSB8]
gi|4981687|gb|AAD36216.1|AE001771_9 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351677782|gb|EHA60929.1| CBS domain containing protein [Thermotoga maritima MSB8]
Length = 215
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 23/159 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+ + + T+ EAL+ + + +I V+ ++ K+VG+V++ DLL
Sbjct: 3 VKDFMTR--NPITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLYASPSK 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N W EL LLSK + ++MT + V+ENT +EDAAR++
Sbjct: 60 ATTLN----------IW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI---KRDG 230
E LPVVD G+LVG+IT+ ++ + ++I KR+G
Sbjct: 103 EKDISGLPVVDDAGRLVGIITQTDIFKVFVEIFGTKREG 141
>gi|91774375|ref|YP_544131.1| CBS domain-containing protein [Methylobacillus flagellatus KT]
gi|91708362|gb|ABE48290.1| CBS domain containing membrane protein [Methylobacillus flagellatus
KT]
Length = 410
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R G T GD M++ D+ +V+ T ++EA L+ I PVID +++G+++ +D +
Sbjct: 244 RFGEITCGDIMSR--DVVSVEYGTLLEEAWPLLLNHHIKALPVIDRAHRVIGIITRFDFM 301
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ +P + F L+ +VVG +MT L V E+T++
Sbjct: 302 --------KHANLEAYPGFEEKLRKFIRRTFLVETDKPEVVGQIMTSKVLTVSEDTHIVQ 353
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
LL E +PV+D +LVG++T+ +++ A
Sbjct: 354 LVPLLSERGIHHVPVLDHERRLVGIVTQTDLIAA 387
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 156 ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
E+Q + GD+M+ + V T LE+A LLL + LPV+D +++G+IT
Sbjct: 237 EMQAYKRRFGEITCGDIMSRDVVSVEYGTLLEEAWPLLLNHHIKALPVIDRAHRVIGIIT 296
Query: 216 RGNVVRAA 223
R + ++ A
Sbjct: 297 RFDFMKHA 304
>gi|453051718|gb|EME99217.1| hypothetical protein H340_17457 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 229
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + MT+ ++ V+ T E ++ L E +T PV+D ++VGVVS+ DL+
Sbjct: 6 TVDELMTR--NVVRVRPDTPFKEIVKELAENDVTAVPVVDQGGRVVGVVSEADLMR---- 59
Query: 134 SGGNQNDT---SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+Q D PN + W+ +K G +LM+ P+ N+ + A
Sbjct: 60 KSADQPDPFGRVPVPNPEA-WER--------AKAEGARAEELMSAPPVCARPEWNVVETA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
RL+ +RLPVVD +LVG+I+R +V+R L+
Sbjct: 111 RLMSAQNVKRLPVVDETDRLVGIISRADVLRVFLR 145
>gi|21225805|ref|NP_631584.1| hypothetical protein SCO7540 [Streptomyces coelicolor A3(2)]
gi|7799276|emb|CAB90898.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 223
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V+ T E L+E IT PV+D++ + VGVVS+ DLL + GG + ++
Sbjct: 17 VQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLL--QKMWGGEPDGSA----E 70
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
++ W + K + LMT PL E+ ++ DAAR++ + +RL VVDG
Sbjct: 71 HAEWSRASA-----GKADATDAAGLMTSPPLCALESWSVVDAARVMARHRIKRLLVVDGD 125
Query: 208 GKLVGLITRGNVVRAALQIKR 228
G+L G+++R +++R L+ R
Sbjct: 126 GRLAGVVSRSDLLRVFLRTDR 146
>gi|453053892|gb|EMF01351.1| hypothetical protein H340_07121 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 209
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVGD MT + V+ T E + L E IT PV+D D + VGVVS+ DLLA
Sbjct: 6 TVGDLMTHS--VVRVQRGTLFTEIVHVLHEHDITAVPVVDADDRPVGVVSEADLLA---- 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ D SL V + K LMT + + ++ +AAR +
Sbjct: 60 KAARRVDPSLPAAVRA-------------KHEATTAEGLMTSPAVCARPDWSVVEAARTM 106
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
E +RLPVVD G+LVGL++R +++R L+ R
Sbjct: 107 EERHVKRLPVVDAEGRLVGLVSRSDLLRVFLRDDR 141
>gi|220910106|ref|YP_002485417.1| hypothetical protein Cyan7425_4751 [Cyanothece sp. PCC 7425]
gi|219866717|gb|ACL47056.1| CBS domain containing membrane protein [Cyanothece sp. PCC 7425]
Length = 154
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
T V DFMT VK T ++ ++ + + R+ G PV+D+D K+VG++S+ DLL
Sbjct: 2 ATALVQDFMTPNPI--TVKPTDSIATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLLVR 59
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
++ T L + +++ + L K+ +V D+MTP P T + D A
Sbjct: 60 EAPLQAPLYLTFLGSVIY--FESPESFHQHLKKSLSMLVQDVMTPHPTTTTPETPIADVA 117
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L++E RLPV+D GKLVG+I+R +++RA
Sbjct: 118 HLMVEKHIDRLPVIDA-GKLVGIISRRDLIRA 148
>gi|284043348|ref|YP_003393688.1| hypothetical protein Cwoe_1887 [Conexibacter woesei DSM 14684]
gi|283947569|gb|ADB50313.1| CBS domain containing membrane protein [Conexibacter woesei DSM
14684]
Length = 153
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 19/157 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M + D V +V+ L+ L + G PV++ + VG+V++ DL+ +D
Sbjct: 3 TVADIMER--DPITVSPEDSVETLLKVLRTHELPGVPVVNGGGRPVGIVTEADLVMVD-- 58
Query: 134 SGGNQNDTSLFPNVN--------STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTN 185
+ D L +++ K F E R K VGD+MT P+ V +T+
Sbjct: 59 ---EEEDLRLPLHIDLFGAQIFLGPVKRFEERFR---KAIAATVGDMMTEDPITVDADTD 112
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+++AAR++ E ++ RLPVV+ +G+LVG++TR +V+ A
Sbjct: 113 VKEAARIIAERRHNRLPVVE-HGRLVGVVTRLDVLEA 148
>gi|440699107|ref|ZP_20881412.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278413|gb|ELP66451.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 221
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V D MT + AV + + ++ + + +++ PV++ + +++GVVS+ DLL +
Sbjct: 7 SVSDVMTHT--VVAVGRDASFKDIVKLMEQWKVSALPVLEGEGRVIGVVSEADLLPKEEF 64
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+S F +L RL L+K G DLM + VH + L AAR
Sbjct: 65 R-------------DSDPDRFTQLSRLSDLAKAGGLTAADLMNAPAITVHADATLAQAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
++ + K +RLPVV+ G L G+++R ++++ L+
Sbjct: 112 IMAQRKVKRLPVVNAEGLLEGVVSRADLLKVFLR 145
>gi|408534340|emb|CCK32514.1| hypothetical protein BN159_8136 [Streptomyces davawensis JCM 4913]
Length = 206
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
Y V D MT + AV + + E + L E +++ PV+ + ++VGVVS+ DLL +
Sbjct: 6 YRVSDVMTHT--VVAVGSEASFKEIVALLDEWKVSALPVLAGEGRVVGVVSEADLLLKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
Q D + R+ K G+LM+ + VH + +L +AAR+
Sbjct: 64 FRDTEQGDLA---------------DRV--KAGAVTAGELMSAPAVTVHADASLAEAARI 106
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ +RLPVVDG G L G+++R ++++ L+
Sbjct: 107 MARRHVKRLPVVDGVGLLQGVVSRSDLLKVFLR 139
>gi|374301056|ref|YP_005052695.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553992|gb|EGJ51036.1| CBS domain containing membrane protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 152
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 16/139 (11%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T + A L+EKRI G PV++ D +LVG++S DL+A Q T P + +
Sbjct: 19 TEIVAAARVLLEKRINGAPVVEGD-RLVGILSQTDLVA--------QQKTLTMPTLFTLL 69
Query: 152 ------KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+++ +L + K + VG+ MT P+ V +T + D A++++E K LPVV+
Sbjct: 70 DGFIPLRSYEKLDEDMRKISAMTVGEAMTVKPVTVRPDTTITDIAQIMVEKKIHTLPVVE 129
Query: 206 GYGKLVGLITRGNVVRAAL 224
G +LVG+I + +V+R L
Sbjct: 130 G-DRLVGVIGKEDVLRTLL 147
>gi|15669617|ref|NP_248430.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
jannaschii DSM 2661]
gi|2496178|sp|Q58821.1|Y1426_METJA RecName: Full=Uncharacterized protein MJ1426
gi|1592076|gb|AAB99437.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
jannaschii DSM 2661]
Length = 168
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 10/133 (7%)
Query: 100 RLVEK-RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN----VNSTWKTF 154
RL K +I+G PV++ D KLVG++S+ D++ +I N++ + P+ + KT
Sbjct: 38 RLFRKNKISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLILPSPLDLIELPLKTA 95
Query: 155 NELQRLLSKTNGKV---VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+++ + + V D+MT +V + + DAA+L+++ +RLPVVD G L+
Sbjct: 96 LKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLI 155
Query: 212 GLITRGNVVRAAL 224
G++TRG+++ A +
Sbjct: 156 GIVTRGDLIEALI 168
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 165 NGKV--VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
NG++ + D+M P+VV+E+ +L D RL + K PV++ GKLVG+I+ ++V+
Sbjct: 11 NGEIMLIKDIMK-KPIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVK 68
>gi|282880883|ref|ZP_06289576.1| inosine-5'-monophosphate dehydrogenase [Prevotella timonensis CRIS
5C-B1]
gi|281305265|gb|EFA97332.1| inosine-5'-monophosphate dehydrogenase [Prevotella timonensis CRIS
5C-B1]
Length = 495
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ +TV +AL + + I G PV+DD+ LVG+V++ DL
Sbjct: 105 IRRGSTVQDALNMMRDYHIGGIPVVDDENHLVGIVTNRDL-------------------- 144
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
+R L KT + ++MT LV H TNL DAA++L E K +LPVVD
Sbjct: 145 --------RFERRLDKT----IDEVMTSENLVTTHVKTNLSDAAQILQEHKIEKLPVVDN 192
Query: 207 YGKLVGLITRGNVVRA 222
KLVGLIT ++ +A
Sbjct: 193 QNKLVGLITYKDITKA 208
>gi|336113964|ref|YP_004568731.1| hypothetical protein BCO26_1286 [Bacillus coagulans 2-6]
gi|335367394|gb|AEH53345.1| CBS domain containing membrane protein [Bacillus coagulans 2-6]
Length = 153
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 5/147 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM + D+ VK TT+ E L+ L RI G PV+D + KL+G+VSD D++
Sbjct: 3 VKDFMIR--DVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMVSDGDVIRFLQPK 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
D + VN + FNE +L + V + V + E+A R+L
Sbjct: 61 ARTVYDFYITIVVNE-QEDFNE--KLAHSLDFPVEKIMKRRELYTVRPEDDFENALRILA 117
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ +++LPVV+ ++VG+I+RG+++R
Sbjct: 118 KHHFKKLPVVNQADRVVGVISRGDIMR 144
>gi|418054606|ref|ZP_12692662.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353212231|gb|EHB77631.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 246
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Query: 96 EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFN 155
E L+ ++E+ I+G PV++ KLVGV+++ D L + G + L+ + +
Sbjct: 22 EVLQVMLERHISGLPVVNASGKLVGVITEGD--CLRRVETGTEIKRPLWRQL---FTGPE 76
Query: 156 ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+L + + +G+ V ++MT P+ + E+T++ + L+ +++ +RLPV+ G +VG+++
Sbjct: 77 KLAQEYIRAHGRKVSEVMTADPITITEDTDVSEIIHLMEKSRIKRLPVMRG-DAVVGIVS 135
Query: 216 RGNVVRAALQIKRDGERS 233
R NV+RA + RD S
Sbjct: 136 RANVIRALAGLLRDARVS 153
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR---AALQIK 227
D+MT + L + +++LE LPVV+ GKLVG+IT G+ +R +IK
Sbjct: 5 DIMTTGVVSTTPECPLSEVLQVMLERHISGLPVVNASGKLVGVITEGDCLRRVETGTEIK 64
Query: 228 R 228
R
Sbjct: 65 R 65
>gi|448536098|ref|ZP_21622343.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
gi|445702541|gb|ELZ54485.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
Length = 400
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVGD MT +EDLH V +V E + R+ ++R TG+PV+D D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAELMSRMFKERHTGYPVLDGD-ELVGMVTLEDA------ 307
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + + + DL+ P N + A + +
Sbjct: 308 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 344
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G+LVGLI+R +++ A I+ G
Sbjct: 345 QEHGVGRLPVVDADGELVGLISRSDLMTAFNIIQTGG 381
>gi|345021259|ref|ZP_08784872.1| CBS domain containing membrane protein [Ornithinibacillus
scapharcae TW25]
Length = 157
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 7/148 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V +FM D+ ++K T++ E LE LV RI G PV+D + KLVGVVSD D++ +
Sbjct: 3 VKEFMIT--DVISIKENTSIKELLEILVSYRIGGVPVVDSNNKLVGVVSDGDVIRYLKPN 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPL-VVHENTNLEDAARLL 193
D V+ K ++LQ L K V +M + + L+DA RL
Sbjct: 61 SQTVFDMFSIVMVSEPEKLTDKLQYALEKP----VSIMMKRKDIKTIDAECELDDALRLF 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ ++++PV+D ++G+I+RG+++R
Sbjct: 117 SKYHFKKIPVLDNTETVIGVISRGDLLR 144
>gi|299132334|ref|ZP_07025529.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298592471|gb|EFI52671.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 242
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T++ EA ++E RI+G PV+D KLVG++++ D + I G Q
Sbjct: 14 VTEGTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEI--GTQTR------- 64
Query: 148 NSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
+ W F G+ VG++M P+ V E T+LE+ RL+ + +RLPV
Sbjct: 65 RARWLAFFVGPGRAATEFVHEQGRKVGEVMNAQPVTVTEQTSLEEIVRLMEKHNIKRLPV 124
Query: 204 VDGYGKLVGLITRGNVVRAALQIKRD 229
V G +L+G++TR +++R + R+
Sbjct: 125 VRGL-QLLGIVTRTDLLRTVASLDRE 149
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+MT P+ V E T+L +AA L+LE + LPVVD +GKLVG+IT G+ VR A
Sbjct: 6 VMTRNPITVTEGTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRA 57
>gi|288932855|ref|YP_003436915.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288895103|gb|ADC66640.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 259
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 35/151 (23%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MTK D+ VK T+ E ++ + + GFPVIDD+ ++G +S DLL
Sbjct: 5 VKDYMTK--DVVVVKPDQTIKEVIDLIEKTGHDGFPVIDDNGIVIGYISSRDLLR----- 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N+++ K D+M+ +V E+ +L DAAR++
Sbjct: 58 ----------KNLDTKVK------------------DVMSKKLIVAREHMDLRDAARVMF 89
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
T +LPV+D GKL+G+I+ +V+R+ ++
Sbjct: 90 RTGRSKLPVIDEKGKLIGIISNTDVIRSQIE 120
>gi|440700922|ref|ZP_20883148.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440276455|gb|ELP64712.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 244
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T E L + RI+G PV+D+D ++GV+S+ DL+ + D P
Sbjct: 21 TPFKEVARLLADHRISGLPVVDEDDHVIGVISETDLM----VRQAATPDPYEPPRHGLGL 76
Query: 152 KTFNE-LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
+R +K + G LMT P+V H + + AAR + + + RLPV+D +L
Sbjct: 77 AGLTRGARRQAAKEKARTAGQLMTEPPVVAHADDTIVQAARTMAQRRVERLPVLDEENRL 136
Query: 211 VGLITRGNVVRAALQ 225
VG++TR ++++ L+
Sbjct: 137 VGIVTRRDLLQVFLR 151
>gi|148269243|ref|YP_001243703.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281411541|ref|YP_003345620.1| hypothetical protein Tnap_0098 [Thermotoga naphthophila RKU-10]
gi|147734787|gb|ABQ46127.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281372644|gb|ADA66206.1| CBS domain containing membrane protein [Thermotoga naphthophila
RKU-10]
Length = 150
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTS 142
D+ AV TV+ ++ L + ++G PV+D D ++VG VS+ DL+ AL S
Sbjct: 10 DISAVFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSAS 69
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
P+ N +L R + K + V D M P+VV E+ L AA L+ ++ LP
Sbjct: 70 FIPDTN-------QLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLP 122
Query: 203 VVDGYGKLVGLITRGNVVRAA 223
VVD +LVG++ R +++R
Sbjct: 123 VVDEAMQLVGIVRRIDILRVV 143
>gi|290955600|ref|YP_003486782.1| hypothetical protein SCAB_10371 [Streptomyces scabiei 87.22]
gi|260645126|emb|CBG68212.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 209
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 17/156 (10%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+ YTV D MT + AV E ++ + +++ PV++ + ++VGVVS+ DLL
Sbjct: 4 DSPYTVSDVMTHT--VVAVGRDAPFKEIVQLFDQWKVSALPVLEGEGRVVGVVSEADLLH 61
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+ F + + F + RL K G+LM + VH + +L +A
Sbjct: 62 KEE-----------FRDADERQGDFAD--RL--KAGAVTAGELMNAPAVSVHPDASLAEA 106
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AR++ K +RLPVVD G L G+++RG++++ L+
Sbjct: 107 ARIMARRKVKRLPVVDRVGMLQGVVSRGDLLKVFLR 142
>gi|222100721|ref|YP_002535289.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221573111|gb|ACM23923.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 150
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTS 142
D+ AV TV+ ++ L + ++G PV+D D ++VG VS+ DL+ AL S
Sbjct: 10 DISAVFEDETVETVIKLLSRQNLSGIPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSAS 69
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
P+ N +L R + K K + + M+ P+VV E+ L AA L+ ++ LP
Sbjct: 70 FIPDTN-------QLIRNIVKIKDKPISNYMSKPPVVVKEDDPLIVAADYLIRHGFKSLP 122
Query: 203 VVDGYGKLVGLITRGNVVRAA 223
VVD +LVG++ R +V+R
Sbjct: 123 VVDDSMQLVGIVRRIDVLRVV 143
>gi|294633387|ref|ZP_06711946.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831168|gb|EFF89518.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 225
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 105 RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LS 162
+++ PV++ + +++GVVS+ DLL + +S F +L+RL L+
Sbjct: 25 KVSALPVLEGEGRVIGVVSEADLLPKEEFR-------------DSDPDRFTQLRRLSDLA 71
Query: 163 KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K G+LM+ + VH + L +AAR++ + + +RLPVV+ G L G+++RG++++
Sbjct: 72 KAGALTAGELMSSPAVTVHPDAPLAEAARIMAQRRVKRLPVVNAEGLLEGVVSRGDLLKV 131
Query: 223 ALQ 225
L+
Sbjct: 132 FLR 134
>gi|78043747|ref|YP_359045.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995862|gb|ABB14761.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
Z-2901]
Length = 210
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 27/161 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-LALDSI 133
V D MT+ +L VK+T T+ EA+ + EKRI PV+ DD KLVG+VSD DL A S
Sbjct: 3 VKDIMTR--ELITVKSTDTIREAMAKGHEKRIRHLPVV-DDGKLVGIVSDRDLRYACPSP 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G +N W+ VGD+M + H +E+AA+++
Sbjct: 60 FTGEKN--------GECWQIK--------------VGDIMQKRVVTAHPLDPVEEAAKMM 97
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
LE + LPV+ +LVG+IT+G++V A ++ +RS+
Sbjct: 98 LENRVGCLPVLLD-DELVGIITQGDIVMAFAELMGVYKRSS 137
>gi|404496740|ref|YP_006720846.1| hypothetical protein Gmet_1882 [Geobacter metallireducens GS-15]
gi|418065311|ref|ZP_12702685.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
gi|78194344|gb|ABB32111.1| CBS domain pair-containing protein [Geobacter metallireducens
GS-15]
gi|373562489|gb|EHP88700.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
Length = 149
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 19/158 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT D+ +VK TT+ E E + R+ PV+D+ L+G+V++ DL+
Sbjct: 4 VRDIMTT--DVVSVKRETTIRELAEIFTKHRVGSVPVVDESGNLIGIVTESDLI------ 55
Query: 135 GGNQNDTSL-FPNVNS--TWKTFNE----LQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
+ D SL P V S W + E ++ L K G+ VGDL T +V +T +
Sbjct: 56 ---EQDKSLHIPTVISLFDWVIYLESEKKFEKELQKMTGQTVGDLYTDTAEMVTPDTPVS 112
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ A ++ K LPVV+G +LVG+++R +++R ++
Sbjct: 113 EVADIMSSKKLHALPVVEG-KRLVGMVSRIDLIRTMVK 149
>gi|381210106|ref|ZP_09917177.1| CBS domain containing membrane protein [Lentibacillus sp. Grbi]
Length = 155
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ DFM D+ +V+ + + L+ LVE +I G PV+D++ +L+G++SD D++
Sbjct: 3 IQDFMIT--DVISVQEDIKIKDLLKTLVEHKIGGVPVVDENARLIGMISDGDVIRYLQPD 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G D + N+++ + + ++V VH + +E+A LL
Sbjct: 61 GRTIYDAFSMVFITEKEGLRNKIETSIEHHSSEIV----KKNVYAVHPDDEIEEALSLLS 116
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++++PVVD K+VG+++RG+++R+
Sbjct: 117 RYHFKKIPVVDASNKVVGVVSRGDIIRSV 145
>gi|170287905|ref|YP_001738143.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|403252570|ref|ZP_10918879.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|170175408|gb|ACB08460.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
gi|402812060|gb|EJX26540.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 150
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTS 142
D+ AV TV+ ++ L + ++G PV+D D ++VG VS+ DL+ AL S
Sbjct: 10 DISAVFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSAS 69
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
P+ N +L R + K + V D M P+VV E+ L AA L+ ++ LP
Sbjct: 70 FIPDTN-------QLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLP 122
Query: 203 VVDGYGKLVGLITRGNVVRAA 223
VVD +LVG++ R +++R
Sbjct: 123 VVDEAMQLVGIVRRIDILRVV 143
>gi|297197540|ref|ZP_06914937.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715588|gb|EDY59622.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 234
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
L + RI+G PV+D+D K++GV+S+ DL+ + D P ++
Sbjct: 21 LADHRISGLPVVDEDDKVIGVISETDLV----VRQAATPDPFGPPRRRWLPALTRSARQQ 76
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+K + G LMT P+ VH + ++ +AAR + + RLPV+D +LVG++TR +++
Sbjct: 77 AAKVEARTAGRLMTEPPVTVHADDSIVEAARTMAQRCVERLPVLDEEHRLVGIVTRRDLL 136
Query: 221 RAALQ 225
+ L+
Sbjct: 137 QVFLR 141
>gi|403253876|ref|ZP_10920176.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|402810779|gb|EJX25268.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 215
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 23/159 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+ + + T+ EAL+ + + +I V+ ++ K+VG+V++ DLL
Sbjct: 3 VKDFMTR--NPITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLYASPSK 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N W EL LLSK + ++MT + V+ENT +EDAAR++
Sbjct: 60 ATTLN----------IW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI---KRDG 230
E LPVVD G LVG+IT+ ++ + ++I KR+G
Sbjct: 103 EKDISGLPVVDDAGHLVGIITQTDIFKVFVEIFGTKREG 141
>gi|290955592|ref|YP_003486774.1| hypothetical protein SCAB_10291 [Streptomyces scabiei 87.22]
gi|260645118|emb|CBG68204.1| putative CBS domain protein [Streptomyces scabiei 87.22]
Length = 226
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
AV+ T + + + +++++ PV++ D ++VGVVS+ DLL +
Sbjct: 20 AVRRDTPFKDIVRAMTDRQVSAVPVVEGDGRVVGVVSEADLLPKEEFR------------ 67
Query: 147 VNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
+ +L+R+ L+K ++M+ +V H + L AAR++ + +RLPV+
Sbjct: 68 -DRDLTRAEQLRRMSDLAKAGAVTAEEVMSAPAIVAHPDVTLAQAARIMAVNRVKRLPVI 126
Query: 205 DGYGKLVGLITRGNVVRAALQIKRDGE 231
D G+L+G+++RG++++ L+ D E
Sbjct: 127 DDEGRLLGVVSRGDLLKVFLRSDEDIE 153
>gi|187920240|ref|YP_001889271.1| hypothetical protein Bphyt_5546 [Burkholderia phytofirmans PsJN]
gi|187718678|gb|ACD19901.1| CBS domain containing membrane protein [Burkholderia phytofirmans
PsJN]
Length = 230
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT+ + +V +TV E + V+ I+G PV+D D L+G++S+ DLL + I
Sbjct: 5 DVMTRS--VISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTD 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
++ TS ++ W +E + + KT+ V D+M+ + V T L + A +L
Sbjct: 63 ERSRTSWLDHL---WSASHEARDYI-KTHATKVRDVMSTEVVTVQPGTPLGEVASILETR 118
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +R+PV + G+LVG+++R N+V+A
Sbjct: 119 RIKRVPVTEA-GRLVGIVSRANLVQA 143
>gi|289774171|ref|ZP_06533549.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289704370|gb|EFD71799.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 228
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 17/158 (10%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
N TV D MT AV + + L + +++ PV++ + +++G+VS+ DLL
Sbjct: 3 NSPRTVNDVMTHTA--VAVGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLP 60
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLE 187
+ +S F +++RL L+K G D+MT + VH + L
Sbjct: 61 KEEFR-------------DSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLA 107
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AAR++ + K +RLPVV+ G L G+++R ++++ L+
Sbjct: 108 QAARIMAQRKVKRLPVVNAEGLLEGVVSRADLLKVFLR 145
>gi|453049496|gb|EME97086.1| putative CBS domain-containing protein [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 228
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+G TVGD MT+ + AV E ++ L E R+ PV+ + ++VGVVS DLL+
Sbjct: 6 HGPRTVGDVMTRT--VVAVGRRAVYKEIVKTLAEWRVGTVPVLAGEGRVVGVVSRADLLS 63
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+ + V + L+K + DLM+ + V + + +A
Sbjct: 64 REEFRDEPGREVE---GVGAAVALGRHGADGLAKAAARTAEDLMSAPAVTVRGDATVAEA 120
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
AR++ + + LPVVD G+L G+++RG+++ L+ D
Sbjct: 121 ARIMARARVKTLPVVDAEGRLAGIVSRGDLLTVYLREDED 160
>gi|91773317|ref|YP_566009.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712332|gb|ABE52259.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
Length = 154
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI-SGGNQNDTSLFPNVNSTW 151
T+ + L +K I+G PV+D+ K+VG+VS+ DLL L +I G S F +
Sbjct: 19 TISSTAQLLKKKNISGVPVVDEG-KVVGIVSEVDLLKLLNIPEHGGLWLPSPFEIIEIPI 77
Query: 152 KT---FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG 208
+ + + +++LS K V D+M + +++EDA+R + K RLPVVD G
Sbjct: 78 RELIGWEDTKKMLSDVGSKPVSDIMEKDVFTIGLESSVEDASRSMSRHKINRLPVVDN-G 136
Query: 209 KLVGLITRGNVVRA 222
++VGLITRG+++R
Sbjct: 137 EIVGLITRGDIIRG 150
>gi|408381781|ref|ZP_11179329.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
gi|407815712|gb|EKF86282.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
Length = 157
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 78/132 (59%), Gaps = 9/132 (6%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN-------DTSLFPNVNSTWKT 153
L E +I+G PV++ + +LVG++S+ D++ L I + D P V ++
Sbjct: 27 LRENKISGAPVMNKEDQLVGIISEGDIMRLLEIHSPHIRLILPSPLDLIELP-VRMKYE- 84
Query: 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGL 213
+E+ ++K ++G++MT + + ++++ DAA+L+ +RLPVVD GK+VG+
Sbjct: 85 MDEIAEDMNKAASVLIGEIMTKKVVTIDPDSDISDAAQLMDTHDVKRLPVVDSDGKMVGI 144
Query: 214 ITRGNVVRAALQ 225
ITRG+++ A ++
Sbjct: 145 ITRGDIIGAMVR 156
>gi|395777163|ref|ZP_10457678.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 221
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 18/159 (11%)
Query: 70 NGT-YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+GT + V D MT + +V + + + + E R++ PV + + ++VGVVS+ DLL
Sbjct: 2 DGTPHVVSDVMTHT--VVSVGRDASFKDIVRLMREWRVSALPVTEGEDRVVGVVSEADLL 59
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNL 186
+ + + + +L+RL L K G DLMT L V +T L
Sbjct: 60 CKEEFRDDDPD-------------RYTQLRRLRDLEKAGGVRARDLMTSPALSVRADTTL 106
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AAR++ +RLPVVD G+L G+++R ++++ L+
Sbjct: 107 AQAARVMARASVKRLPVVDALGRLEGIVSRADLLKVFLR 145
>gi|333911316|ref|YP_004485049.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751905|gb|AEF96984.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 153
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 13/128 (10%)
Query: 103 EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN--------VNSTWKTF 154
E +I+G PV++D KLVG++S+ D++ +I+ N++ + P+ + +T K
Sbjct: 29 EHKISGAPVVED-GKLVGIISESDIVK--TITTHNESIGLILPSPLDLIELPLKTTLK-I 84
Query: 155 NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
E + + K V D+MT + + + + DAA+L++E +RLPVV+ GKLVG++
Sbjct: 85 EEFKEDIKKALKTKVKDVMTKDVITISPDETINDAAKLMIENNIKRLPVVEN-GKLVGIV 143
Query: 215 TRGNVVRA 222
TRG+++ A
Sbjct: 144 TRGDLIEA 151
>gi|326781239|ref|ZP_08240504.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
gi|326661572|gb|EGE46418.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
Length = 207
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+TV D M+ AV + + + +E + E +++ PV+ + ++VGVVS+ DLL ++
Sbjct: 6 HTVSDVMSHTP--VAVGSHASYRQVVELMSESKVSALPVLAGEGRVVGVVSEADLLPKEA 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
G P + F K +V DLM+ + VH + + +AAR+
Sbjct: 64 FREGGP------PAAAQLDEAF--------KAAAVLVEDLMSSPAVTVHPDAPIAEAARI 109
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ +RLPVV+ G L G+++RG++++ L+ D
Sbjct: 110 MARKHVKRLPVVNSEGLLEGVVSRGDLLKVFLRPDED 146
>gi|345868322|ref|ZP_08820314.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
gi|344047243|gb|EGV42875.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
Length = 156
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 26/158 (16%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
N V D+MT+ DL K TVDE + L+ +I+G PV++ +LVG++S+ D L
Sbjct: 19 NEQLKVSDYMTR--DLITFKPEHTVDEVIHALIANKISGGPVVNAKNELVGIISEGDCL- 75
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
K E VVG+ M + + ++ +A
Sbjct: 76 ----------------------KQITESHYYNMPVEQDVVGNRMVKNVETIDGDMDVFEA 113
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
A+ L +K RR P+V+ GKLVG I++ ++++AA+Q+K
Sbjct: 114 AKKFLNSKIRRFPIVE-EGKLVGQISQKDILKAAMQLK 150
>gi|302555051|ref|ZP_07307393.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302472669|gb|EFL35762.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 221
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT + AV + +E + + +++ PV++ + +++GVVS+ DLL +
Sbjct: 6 HIVSDVMTHT--VVAVGRDAAFKDIVEVMEQWKVSALPVLEGEGRVIGVVSEADLLFKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+S F +L RL L K G DLM+ + VH + L AA
Sbjct: 64 FR-------------DSDPDRFTQLGRLSDLVKAGGMTAEDLMSSPAVTVHTDATLAQAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
R++ + K +RLPVV+ G L G+++R ++++ L+ D
Sbjct: 111 RIMAQRKVKRLPVVNEEGLLEGVVSRADLLKVFLRTDED 149
>gi|218297190|ref|ZP_03497852.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242467|gb|EED09006.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 150
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL-DSI 133
V D MT+ ++ ++ T++EA +++E R GFPV+D++ +L+G++ +LL +++
Sbjct: 3 VADLMTRAPEI--LRPKATLEEAARKILETRYGGFPVVDEEGRLLGLLQVEELLPRPENV 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ LF W LQ + + V +M VH L A ++L
Sbjct: 61 PFSDVEALQLF----GEWVDEGTLQEIYRRYQSTPVEAVMLKEIPRVHPEDPLGKALQVL 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L T+ R LPVVD K+VG++TR ++++ L+
Sbjct: 117 LTTEVRHLPVVDQEDKVVGILTRSDILKLILR 148
>gi|282859613|ref|ZP_06268716.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
JCVIHMP010]
gi|424899660|ref|ZP_18323202.1| inosine-5''-monophosphate dehydrogenase [Prevotella bivia DSM
20514]
gi|282587616|gb|EFB92818.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
JCVIHMP010]
gi|388591860|gb|EIM32099.1| inosine-5''-monophosphate dehydrogenase [Prevotella bivia DSM
20514]
Length = 494
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ +TV +AL + E I G PV+DDD LVG+V++ DL
Sbjct: 105 IRRGSTVRDALAMMAEYHIGGIPVVDDDNHLVGIVTNRDL-------------------- 144
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
+R L K+ + ++MT LV H+ TNL +AA +L E K +LPVVD
Sbjct: 145 --------RFERRLDKS----IDEVMTSENLVTTHQKTNLAEAADILQENKIEKLPVVDN 192
Query: 207 YGKLVGLITRGNVVRA 222
LVGLIT ++ +A
Sbjct: 193 NNHLVGLITYKDITKA 208
>gi|322420873|ref|YP_004200096.1| hypothetical protein GM18_3385 [Geobacter sp. M18]
gi|320127260|gb|ADW14820.1| CBS domain containing protein [Geobacter sp. M18]
Length = 217
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 21/145 (14%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
+V EAL + EK+I PV+D KLVG+VSD DLL S TSL + W
Sbjct: 19 SVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKASPSSA-----TSL-----AIW- 67
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
E+ LL+K V M + V E+T LE+AAR++++ + LPV++G KLVG
Sbjct: 68 ---EIHDLLAKLT---VEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVMNGE-KLVG 120
Query: 213 LITRGNVVRAALQI---KRDGERST 234
+IT ++ + L++ +R G R T
Sbjct: 121 IITESDLFKTLLELLGGRRQGVRIT 145
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+V D MT P+ + + ++ +A RL+ E K RRLPVVD GKLVG+++ ++++A+
Sbjct: 2 LVRDRMTLNPITIIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKAS 57
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALD 131
TV M K ++ V T ++EA +V++RI G PV++ + KLVG++++ DL L
Sbjct: 76 LTVEKCMAK--EVITVPEDTPLEEAARIMVDRRIGGLPVMNGE-KLVGIITESDLFKTLL 132
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
+ GG + + + T ++ + + + G +VG
Sbjct: 133 ELLGGRRQGVRITVSTTGAKGTLADVTKTIYEAGGNIVG 171
>gi|221632888|ref|YP_002522110.1| hypothetical protein trd_0888 [Thermomicrobium roseum DSM 5159]
gi|221156067|gb|ACM05194.1| CBS domain protein/ACT domain protein [Thermomicrobium roseum DSM
5159]
Length = 162
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 35/139 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
E++ V+ TTV+E L+ RITG PVID+ +++G+VS++DLLA
Sbjct: 17 ENVVTVRPNTTVEEVARLLMTHRITGVPVIDEAGRVLGIVSEFDLLA------------- 63
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
G G++MT + V E T E A L+++ + RR+P
Sbjct: 64 ---------------------KRGHTAGEIMTRDVIAVTEETPAEAIADLIVQQRVRRVP 102
Query: 203 VVDGYGKLVGLITRGNVVR 221
V+ G+LVG++TR +++R
Sbjct: 103 VLK-EGRLVGIVTRADLIR 120
>gi|448489161|ref|ZP_21607535.1| peptidase M50 [Halorubrum californiensis DSM 19288]
gi|445695106|gb|ELZ47217.1| peptidase M50 [Halorubrum californiensis DSM 19288]
Length = 394
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT++EDLH V T+V + + R+ E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTRQEDLHTVTEDTSVADLMSRMFEERHTGYPVLDGD-QLVGMVTLEDA------ 301
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + V D+M + N + A + +
Sbjct: 302 ------------------RSVREVER-----DAYTVDDVMATDLVAADPNADALTALQTM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G+LVGLI+R +++ A I+ G
Sbjct: 339 QEHGVGRLPVVDADGELVGLISRSDLMTAFNIIQTGG 375
>gi|427714431|ref|YP_007063055.1| hypothetical protein Syn6312_3486 [Synechococcus sp. PCC 6312]
gi|427378560|gb|AFY62512.1| CBS domain-containing protein [Synechococcus sp. PCC 6312]
Length = 152
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 18/158 (11%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V D+MT H V T +++ A++ + E+++ G PV+D+ KLVG++++ DL+
Sbjct: 3 TAVVQDYMTTNP--HTVSPTDSIETAIKLMEERQVRGLPVVDEAGKLVGLITEADLIV-- 58
Query: 132 SISGGNQNDTSLFPNVNST-------WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
+ L P V T +++ + L KT G V D MT P+ T
Sbjct: 59 -------REAPLEPPVYLTLLGSVIYFESPEKFHHHLKKTLGMQVQDAMTTDPVTTTPTT 111
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + A+ ++ RLPV+D G LVG+ITR ++++A
Sbjct: 112 PISEVAQAIVHHHISRLPVLDETGGLVGIITRHDLMQA 149
>gi|389690038|ref|ZP_10179055.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589556|gb|EIM29844.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 299
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ D+ +V T T V E L KRI+ PVI D +L+G+VS+ DL+ I
Sbjct: 74 TVADVMTR--DVVSVSTATPVSEIANVLAGKRISAVPVIGADGRLLGIVSEGDLIRRAEI 131
Query: 134 SGGNQND--TSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ + +V + + +T+G+ +M P + E L DAA
Sbjct: 132 GTERRRPWWRKVLTDVEAEAADY-------VRTHGRKAQHVMRPQVVTATEAMTLADAAD 184
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
++ + + +R+PVV G LVG+++R ++V+A
Sbjct: 185 IMEKRRLKRMPVVRG-SHLVGIVSRSDLVKA 214
>gi|338997445|ref|ZP_08636142.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
gi|338765623|gb|EGP20558.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
Length = 229
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 9/146 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ++ V V + + L+E RI+ P++DD+ +++G+VS+ DL+ +
Sbjct: 5 DIMTP--NVVCVGPDANVRDIAQLLLEHRISAVPIVDDERRVLGIVSEGDLMR--RVKDE 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ S + ++ S K E K++G+ ++MT PL V EN L ARLL +
Sbjct: 61 ADDSRSWWLSLFSGGKDAGEY----VKSHGRKAHEVMTSKPLTVEENAPLHTIARLLEKH 116
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PVV GKLVG+++R N+++
Sbjct: 117 HIKRVPVVRD-GKLVGIVSRANLLQG 141
>gi|441162550|ref|ZP_20968124.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440616548|gb|ELQ79684.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 224
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
N TVGD MT+ + ++ E + + + +++ PV++ + ++VGVVS+ DLL
Sbjct: 9 NSLRTVGDVMTRT--VISIGRAAPFKEIVRTMEQWKVSALPVVEGEGRVVGVVSEADLLP 66
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLE 187
+ + T +L+ L L K+ G +LMT + VH + L
Sbjct: 67 KEEFR-------------DHTPSRIEQLRVLDALIKSGGVTADELMTAPAVTVHADATLA 113
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
AAR + + +R+PVVD G+L G+++R ++++ L+ D
Sbjct: 114 QAARTMAWYRIKRMPVVDAVGRLEGVVSRSDLLKVFLREDED 155
>gi|414164101|ref|ZP_11420348.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
gi|410881881|gb|EKS29721.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
Length = 242
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T++ EA ++E RI+G PV+D KLVG++++ D + I G Q
Sbjct: 14 VTEDTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEI--GTQTK------- 64
Query: 148 NSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
+ W F G+ VG++M P+ V E T+LE+ RL+ + +RLPV
Sbjct: 65 RARWLAFFVGPGRAATEFVHEQGRKVGEVMNSRPVTVTELTSLEEVVRLMEKHNIKRLPV 124
Query: 204 VDGYGKLVGLITRGNVVRAALQIKRD 229
V G +L+G++TR +++R + R+
Sbjct: 125 VRGM-QLLGIVTRTDLLRTVASLDRE 149
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
V +MT P+ V E+T+L +AA L+LE + LPVVD +GKLVG+IT G+ VR A
Sbjct: 3 VHQVMTRNPITVTEDTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRA 57
>gi|27379749|ref|NP_771278.1| hypothetical protein blr4638 [Bradyrhizobium japonicum USDA 110]
gi|27352902|dbj|BAC49903.1| blr4638 [Bradyrhizobium japonicum USDA 110]
Length = 240
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 14/143 (9%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ AV TT++EA + ++ I+G PVIDD LVG+VS+ D L I G +
Sbjct: 10 DVVAVTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLRRSEIGTGRK----- 64
Query: 144 FPNVNSTW-KTFNELQRLLSK---TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
++ W K F +R ++ +G+ V D+MT + E T+L D L+ + +
Sbjct: 65 ----HAAWLKFFMGPRRAAAEFVHESGRKVEDVMTRQVVSAREETSLVDVVDLMEKHDIK 120
Query: 200 RLPVVDGYGKLVGLITRGNVVRA 222
R+PV+ G +G++TR N+++A
Sbjct: 121 RVPVMRGEAT-IGIVTRSNLLQA 142
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V +T +E+AA+++L LPV+D G LVG+++ + +R
Sbjct: 6 VMTRDVVAVTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLR 55
>gi|375096602|ref|ZP_09742867.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
gi|374657335|gb|EHR52168.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
Length = 225
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M K + V T + + L E RI+ V+D+ +GVVS+ DLLA +
Sbjct: 5 TVADVM--KRPVVTVDAQTPFKDIVSLLAEHRISAVAVVDEGRHPLGVVSEADLLAKE-- 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+Q T+ P+V F EL+R +K G ++MT +H L AAR
Sbjct: 61 ---DQRGTAHPPSV------FTELRRWRRWTKARGATAREVMTRHVRTIHREEPLAVAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNV----VRAALQIKRDGERS 233
L E + RRL V+D G LVG++ R +V +R +IKR ER
Sbjct: 112 RLAEGRLRRLFVIDSSGTLVGVLARRDVLGVFLRPDEEIKRAVERE 157
>gi|260654571|ref|ZP_05860061.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|424844536|ref|ZP_18269147.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
gi|260630587|gb|EEX48781.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|363985974|gb|EHM12804.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
Length = 154
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL--LALD 131
T GD M K DL AV T TV +AL L R++G PV+D W+LVG S+ D LAL
Sbjct: 6 TAGDLM--KRDLSAVLETDTVADALRVLHSHRLSGVPVVDAYWRLVGFFSEADALELALP 63
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV----VGDLMTPAPLVVHENTNLE 187
+ + Q ++ LF ++LLS ++ V M PL VH + ++
Sbjct: 64 TTAQILQQESFLFDE-----------EKLLSAQFARIYSQPVSKYMQRPPLSVHPSAHIL 112
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
A+L+L+ K R+ V D LVG++ + + L
Sbjct: 113 SVAQLMLDKKLYRIAVTDR-DVLVGVLDQSDFCEYLL 148
>gi|405377370|ref|ZP_11031313.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397326183|gb|EJJ30505.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 223
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT K + + +V A + + ++ ++G PV+DD+ +L+GV+S+ DL+ +S
Sbjct: 3 VKDVMTTK--VVGLSPDHSVRHAAKLMSDQHVSGVPVVDDEGRLLGVISEGDLIRRTELS 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G F +E K G VGD+MTP P+ + E+ L A L+
Sbjct: 61 SGA------FVLKADMGVGADERANAFVKRCGWRVGDVMTPDPVTIDEDAPLSRVASLMQ 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ +R+PV+ GKLVG+++R ++++ K D
Sbjct: 115 DHGIKRIPVLRD-GKLVGIVSRADLLQVIYSAKPD 148
>gi|377820764|ref|YP_004977135.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935599|gb|AET89158.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 230
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV +A + +V I+G PVI++ +LVG+V++ DLL I G ++ ++ST
Sbjct: 19 TVRDAAKTMVLGHISGMPVINETGRLVGMVTEGDLLHRQEIGTGFKHRAWWLELLSST-- 76
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
EL K + V D+M+ + V EN + + A LL + +R+PV+ GK+VG
Sbjct: 77 --RELASQYIKEHAGKVKDVMSTEVVTVDENCTVAELAELLERRRIKRVPVMRD-GKVVG 133
Query: 213 LITRGNVVRA 222
LI+R N++RA
Sbjct: 134 LISRANLLRA 143
>gi|451337193|ref|ZP_21907741.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449420152|gb|EMD25654.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 201
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 20/146 (13%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT+ + V TT A E L E T PV+DDD +L+G+V++ DL+
Sbjct: 5 DLMTRP--VVTVTPETTAKHAAEVLAEHGFTALPVVDDDERLIGIVTEADLI-------- 54
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
FP+ + K Q G V ++MT + ++L + R LL+
Sbjct: 55 ----RDRFPDDIRSAK-----QPSGQAAPGATVAEVMTTPVTGMSAGSDLAEVGRALLDG 105
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ R +P+VDG K+VG++TRG+ VRA
Sbjct: 106 RIRAMPIVDG-AKVVGILTRGDFVRA 130
>gi|374998887|ref|YP_004974385.1| hypothetical protein AZOLI_p20005 [Azospirillum lipoferum 4B]
gi|357426312|emb|CBS89217.1| conserved protein of unknown function, Cystathionine beta-synthase
domain [Azospirillum lipoferum 4B]
Length = 233
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT + + + T TV +A +++E I+G PV+D K+VG++S+ DL L + G
Sbjct: 5 DLMTPR--VITIGTDATVADAARKMLENNISGMPVLDAAGKVVGIISEGDL--LRRVELG 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ S + + S E K++ + V D+MT V EN + E+ RL+
Sbjct: 61 TERHRSWWLGLVSGGTLPAE---DFVKSHARKVADVMTAHVTTVDENASPEEVVRLMETR 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +R+PVV G L+G+I+R N++RA
Sbjct: 118 RIKRVPVVR-QGTLIGIISRANLLRA 142
>gi|429195455|ref|ZP_19187487.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428668821|gb|EKX67812.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 14/135 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG MT D+ + T E L + RI+G PV+D+D K++GV+S+ DL+A + +
Sbjct: 6 VGSVMTT--DVVRAEYGTPFKEVARLLADHRISGLPVVDEDDKVIGVISETDLIARQAAT 63
Query: 135 GGNQNDTSLFPNVNSTWKTFNEL----QRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
F TF L +R +KTN + G LMT + H + + +AA
Sbjct: 64 PEPYEPRRRF--------TFPGLTRGARRQAAKTNARTAGRLMTAPAITAHADDTIVEAA 115
Query: 191 RLLLETKYRRLPVVD 205
R + + + RLPV+D
Sbjct: 116 RTMAQHQVERLPVLD 130
>gi|409399062|ref|ZP_11249434.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
gi|409131706|gb|EKN01395.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
Length = 233
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 26/157 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ D+ A+ T++ A +V +I+G PV+D +LVG++S+ DLL
Sbjct: 3 VADVMTR--DVVAIDPQTSLATAAGWMVSHQISGLPVLDQAGRLVGILSEGDLLH----- 55
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLL---------SKTNGKVVGDLMTPAPLVVHENTN 185
P + + K ++ ++ + T+G+ VGD+MT P V +
Sbjct: 56 ---------RPELGTCGKQAGWMRGIMRAEILAADYAHTHGRQVGDVMTRNPSFVRPDLP 106
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L AA L+ + + +RLPV+ G LVG++ R +++RA
Sbjct: 107 LAKAADLMRQKQVKRLPVLQGE-TLVGMLCRFDILRA 142
>gi|402571975|ref|YP_006621318.1| hypothetical protein Desmer_1454 [Desulfosporosinus meridiei DSM
13257]
gi|402253172|gb|AFQ43447.1| CBS-domain-containing membrane protein [Desulfosporosinus meridiei
DSM 13257]
Length = 149
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 15/140 (10%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++T + E + L + +I+G PV+D + KLVG+VS+ DLL ++ P V
Sbjct: 14 IRTDMEIKEVAKILYDHQISGAPVVDSEGKLVGIVSEGDLL--------HKETNPQIPGV 65
Query: 148 NST------WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
++ + Q L K ++MT + +++ ++E+AA L++ K +RL
Sbjct: 66 VGILGALIYYRGVRQYQSDLKKLIALQASEIMTSQVVKINKEASIEEAASLMVSKKIKRL 125
Query: 202 PVVDGYGKLVGLITRGNVVR 221
PV++ GK+VG+ITR ++++
Sbjct: 126 PVIED-GKIVGIITRMDIIK 144
>gi|302556791|ref|ZP_07309133.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
gi|302474409|gb|EFL37502.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
Length = 231
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 96 EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFN 155
E L ++++ PV+D ++GVVS+ DLLA ++ + V W+
Sbjct: 9 EVARTLAREQLSAVPVVDAGDHVIGVVSESDLLAKAAV----MTEPHRHGPVGRLWQ--- 61
Query: 156 ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
RL K++G LMT P+ VH + DAA + RRLPV D G+LVG+++
Sbjct: 62 --HRLYDKSHGDTAATLMTFPPVTVHPAERVSDAAWAAAHARLRRLPVTDHRGRLVGVVS 119
Query: 216 RGNVVRAALQIKRDGE 231
R +++RA I+ D E
Sbjct: 120 RRDLLRAL--IRDDAE 133
>gi|152993377|ref|YP_001359098.1| inosine 5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
gi|151425238|dbj|BAF72741.1| inosine-5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
Length = 481
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 33/125 (26%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
TV EA + E RI+G PV+D D KL+G++++ D+
Sbjct: 103 ATVGEADALMGEYRISGVPVVDADKKLIGIITNRDM------------------------ 138
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
R ++ + KV D MTPAPLV + T LE+AA++L + K +LP+VD GKL
Sbjct: 139 -------RFITDMSLKVA-DTMTPAPLVTAKKGTTLEEAAKVLQKHKIEKLPIVDDDGKL 190
Query: 211 VGLIT 215
GLIT
Sbjct: 191 NGLIT 195
>gi|92117451|ref|YP_577180.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800345|gb|ABE62720.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 242
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 16/156 (10%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN 137
MT++ + V TT+ +A ++++ I+G PVI+ KLVG++S+ D + I G
Sbjct: 6 IMTRQ--VTTVNPDTTIVDAANTMLKQHISGLPVINAAGKLVGIISEGDFIRRAEI--GT 61
Query: 138 QNDTSLFPNVNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
Q + W F G+ VG++MTP P V E+T LED +
Sbjct: 62 QRR-------RARWLKFLLGAGRDASDFVHEQGRKVGEIMTPNPCTVSEDTLLEDIVTTM 114
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ +RLPV+ G ++VG++TR N+++A + R+
Sbjct: 115 EKNSIKRLPVMRG-DQIVGIVTRANLLQAVAGLARE 149
>gi|452209080|ref|YP_007489194.1| CBS domain protein [Methanosarcina mazei Tuc01]
gi|452098982|gb|AGF95922.1| CBS domain protein [Methanosarcina mazei Tuc01]
Length = 154
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI-SGGNQNDTS 142
D+ K TV EA + L E I+G PV++D KLVG+VS+ DLL L I GN S
Sbjct: 10 DVVFCKPENTVREAAKILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPS 68
Query: 143 LFPNVNSTWK---TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
F + + ++ E +++LS + ++MT + + ++E+A+ L++ +
Sbjct: 69 PFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRIN 128
Query: 200 RLPVVDGYGKLVGLITRGNVVRA 222
RLPV++ G +VG++TRG+++
Sbjct: 129 RLPVIEN-GYVVGIVTRGDIIEG 150
>gi|269126276|ref|YP_003299646.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
gi|268311234|gb|ACY97608.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
Length = 227
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V + MT E++ +V+ T E +E + E RI PV+D D +++G+VS+ DLL
Sbjct: 6 VQELMT--ENVVSVRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDLLHKQEFG 63
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + + L + +R +K LMT + V +AAR++
Sbjct: 64 GPRRTPSGLLGALRR--------RRAQAKAGAVNARGLMTTPVITVSPQATAAEAARIMA 115
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
K +LPV D G+LVG++ R +V+R L+
Sbjct: 116 RHKVDQLPVTDDDGRLVGIVARSDVLRVFLR 146
>gi|21226577|ref|NP_632499.1| inosine-5'-monophosphate dehydrogenase [Methanosarcina mazei Go1]
gi|20904852|gb|AAM30171.1| putative inosine-5'-monophosphate dehydrogenase [Methanosarcina
mazei Go1]
Length = 169
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI-SGGNQNDTS 142
D+ K TV EA + L E I+G PV++D KLVG+VS+ DLL L I GN S
Sbjct: 25 DVVFCKPENTVREAAKILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPS 83
Query: 143 LFPNVNSTWK---TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
F + + ++ E +++LS + ++MT + + ++E+A+ L++ +
Sbjct: 84 PFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRIN 143
Query: 200 RLPVVDGYGKLVGLITRGNVVRA 222
RLPV++ G +VG++TRG+++
Sbjct: 144 RLPVIEN-GYVVGIVTRGDIIEG 165
>gi|239616754|ref|YP_002940076.1| CBS domain containing membrane protein [Kosmotoga olearia TBF
19.5.1]
gi|239505585|gb|ACR79072.1| CBS domain containing membrane protein [Kosmotoga olearia TBF
19.5.1]
Length = 150
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 6/142 (4%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ AV T+++ + + K TG PV+D+++++VG +S+ D+ I + L
Sbjct: 10 DVSAVFEDETIEDFIITCLRKMRTGLPVVDEEFRVVGFISESDV-----IKSSLPSYFEL 64
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
+ + T ++RL N + +++PA + V + L +AA LL++ + LPV
Sbjct: 65 LQSASFIPDTHQFVRRLGDIRNDPIASHMVSPA-IAVKPDDTLINAADLLIKKGLKTLPV 123
Query: 204 VDGYGKLVGLITRGNVVRAALQ 225
VD KLVG+ITR N++ +ALQ
Sbjct: 124 VDDDHKLVGIITRLNLIYSALQ 145
>gi|85716122|ref|ZP_01047098.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
gi|85697121|gb|EAQ35003.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
Length = 242
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V TTV +A ++ + I+G PV++ + K+VG++S+ D + I G Q
Sbjct: 14 VHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRAEI--GTQRR------- 64
Query: 148 NSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
+ W F G+ VG++MTP P V E+ +LED ++ + + +RLPV
Sbjct: 65 RARWLAFLLGAGRDASDFVHEQGRKVGEIMTPDPYTVSEDASLEDIVTMMEQKRVKRLPV 124
Query: 204 VDGYGKLVGLITRGNVVRAALQIKRD 229
+ ++VG++TR N+++A + R+
Sbjct: 125 MRN-DQIVGIVTRSNLLQAVAGLARE 149
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+MT + VH +T + DAA +L LPVV+ GK+VG+I+ G+ +R A
Sbjct: 6 IMTRRVITVHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRA 57
>gi|289767041|ref|ZP_06526419.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289697240|gb|EFD64669.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 218
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V+ T E L+E IT PV+D++ + VGVVS+ DLL + GG + ++
Sbjct: 12 VQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLL--QKMWGGEPDGSA----E 65
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
++ W + K + LMT PL E+ ++ DA R++ + +RL VVDG
Sbjct: 66 HAEWSRASA-----GKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGD 120
Query: 208 GKLVGLITRGNVVRAALQIKR 228
G+L G+++R +++R L+ R
Sbjct: 121 GRLAGVVSRSDLLRVFLRTDR 141
>gi|15643592|ref|NP_228638.1| hypothetical protein TM0829 [Thermotoga maritima MSB8]
gi|418045001|ref|ZP_12683097.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
gi|4981361|gb|AAD35911.1|AE001750_5 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678083|gb|EHA61230.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
Length = 150
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTS 142
D+ AV TV+ ++ L + ++G PV+D D ++VG VS+ DL+ AL S
Sbjct: 10 DISAVFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSAS 69
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
P+ N +L R + K + V + M P+VV E+ L AA L+ ++ LP
Sbjct: 70 FIPDTN-------QLIRNVVKIKDRPVSEFMNKPPVVVKEDDPLIVAADYLIRHGFKSLP 122
Query: 203 VVDGYGKLVGLITRGNVVRAA 223
VVD +LVG++ R +++R
Sbjct: 123 VVDEAMQLVGIVRRIDILRVV 143
>gi|168182191|ref|ZP_02616855.1| CBS domain protein [Clostridium botulinum Bf]
gi|170761474|ref|YP_001785527.1| hypothetical protein CLK_3378 [Clostridium botulinum A3 str. Loch
Maree]
gi|237793518|ref|YP_002861070.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
gi|169408463|gb|ACA56874.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
gi|182674627|gb|EDT86588.1| CBS domain protein [Clostridium botulinum Bf]
gi|229262990|gb|ACQ54023.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
Length = 138
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 84/157 (53%), Gaps = 34/157 (21%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT +++ V +V++A E + E + P+ D++ K+VGV++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAELMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVA 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G+ N+ VGD+MT P+V +++ ++ DAAR++
Sbjct: 59 KGSDNNIK--------------------------VGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
E + RRLPV D +VG+++ G++ A++ K + E
Sbjct: 93 ERQIRRLPVEDNQN-IVGIVSLGDI---AIEPKHENE 125
>gi|46580320|ref|YP_011128.1| hypothetical protein DVU1911 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602299|ref|YP_966699.1| hypothetical protein Dvul_1253 [Desulfovibrio vulgaris DP4]
gi|387153254|ref|YP_005702190.1| hypothetical protein Deval_1396 [Desulfovibrio vulgaris RCH1]
gi|46449737|gb|AAS96387.1| CBS domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562528|gb|ABM28272.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
gi|311233698|gb|ADP86552.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
RCH1]
Length = 150
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS-- 149
T + +A LVE++ G PV+DD +LVGV+ DL+ N S F ++
Sbjct: 19 TEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLIT----QHKKLNIPSFFTVLDGFI 74
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209
+ +EL + + + +V MT P+ V T +++ A L++++K LPVV+ GK
Sbjct: 75 PLTSMSELDEQMRRISATIVKHAMTADPVTVTPETAIDEIASLMVDSKLHTLPVVEN-GK 133
Query: 210 LVGLITRGNVVR 221
LVG+I + +++R
Sbjct: 134 LVGVIGKEDLLR 145
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MT +P+ V +T + AAR+L+E K+ LPVVD G+LVG+I + +++
Sbjct: 6 DIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLI 55
>gi|406998496|gb|EKE16427.1| CBS protein [uncultured bacterium]
Length = 150
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MTK D+ V + +D+ L+E RI G PV+DD KLVG++++ D DS +
Sbjct: 3 VKDIMTK--DVITVSSDHGIDQVANILIENRIHGLPVVDD-GKLVGIITETDFFVKDSFN 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ + K + ++ +++ D+MT + V E ++E +
Sbjct: 60 FHLPSYIDFIRKTKFSGKMSSTEKKQIAELINSTAKDIMTEQCVTVCEEDDIEKLLNVFK 119
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVR 221
+T++ +PV+ G+L G++TR +V+R
Sbjct: 120 DTRFSTVPVICEGGELKGIVTRSDVIR 146
>gi|338740852|ref|YP_004677814.1| hypothetical protein HYPMC_4039 [Hyphomicrobium sp. MC1]
gi|337761415|emb|CCB67248.1| conserved protein of unknown function [Hyphomicrobium sp. MC1]
Length = 242
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 86/146 (58%), Gaps = 10/146 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT K + +++ T+ E ++++++ RI+G PV+ +D KLVGVV++ D L G
Sbjct: 5 DVMTTK--VISIRPDATLSEMIKKMLDHRISGLPVVSEDGKLVGVVTEGDCLR--RAETG 60
Query: 137 NQNDTSLFPNVNSTWKTF-NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
+ S + ++ + +T NE R T+G+ V ++MT P+ V +T L + ++ +
Sbjct: 61 TEVKRSFWRDMLTGSETLANEYIR----THGRKVSEVMTRDPISVSPDTELSEVIHVMEK 116
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVR 221
+ +R+PVV G +VG+++R N+++
Sbjct: 117 NRIKRVPVVKD-GAVVGILSRANLLQ 141
>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
Length = 147
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 27/135 (20%)
Query: 91 TTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150
++TV EA +V+ PV+DD LVGVV+D D +A ++ G +D
Sbjct: 17 SSTVQEAASLMVDNDCGEIPVVDDSGALVGVVTDRD-IACRCVAKGKSSD---------- 65
Query: 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
QR V ++MT +P+ V + ++++ + + + RRLPVVD GK
Sbjct: 66 -------QR---------VEEVMTSSPVTVTADASVDECCTKMEDNQVRRLPVVDDKGKC 109
Query: 211 VGLITRGNVVRAALQ 225
G++ + ++ R+A +
Sbjct: 110 CGIVAQADIARSAAE 124
>gi|386393723|ref|ZP_10078504.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
gi|385734601|gb|EIG54799.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
Length = 218
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 82/152 (53%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VGD+M+ D+ V ++ +A + EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMST--DVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS--- 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T + E+ LLS+ K+ G +MT PL + + +E AA ++
Sbjct: 58 ----------PSSATTLDMY-EMTYLLSEM--KIKG-IMTKNPLSIRRSDTVERAALIMR 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K+ LPVVD GK+VG+IT ++ R + I
Sbjct: 104 DRKFGSLPVVDEAGKVVGIITDTDIFRLFVSI 135
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+VGD M+ V E+ ++ A R++ E K RRLPVVD G+LVG+++ ++ A+
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS 57
>gi|89889989|ref|ZP_01201500.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
gi|89518262|gb|EAS20918.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
Length = 155
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 26/165 (15%)
Query: 63 TNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVV 122
T+ V N + V DFMT+K L + +E L+++RITG PV+++ +LVG++
Sbjct: 11 TSQVSNSNQAFQVKDFMTRK--LVTFNPDQGITTVMETLLKQRITGGPVVNERKELVGII 68
Query: 123 SDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE 182
SD DL+ + S + N+ + V D M+ +
Sbjct: 69 SDTDLMHVIG--------DSRYHNM---------------PVGDRKVSDYMSKQVDTIDA 105
Query: 183 NTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
++ +AA L+T +RR PV + GKL+G I+R +V+ AA Q+K
Sbjct: 106 EADIFEAATRFLKTGHRRFPVTEN-GKLIGQISRMDVIIAATQLK 149
>gi|148264366|ref|YP_001231072.1| hypothetical protein Gura_2320 [Geobacter uraniireducens Rf4]
gi|146397866|gb|ABQ26499.1| CBS domain containing protein [Geobacter uraniireducens Rf4]
Length = 150
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 19/158 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D MTK D+ VKT TTV E E R++ FPV+DD+ +L+G+V++ DL+
Sbjct: 3 TAADVMTK--DVITVKTGTTVRELAELFTANRMSSFPVVDDNGELIGIVTETDLI----- 55
Query: 134 SGGNQNDTSL-FPNVNS--TWKTFNELQRLLSKT----NGKVVGDLMTPAPLVVHENTNL 186
+ D SL P V S W + E ++ K G+ VGD+ T V + L
Sbjct: 56 ----EQDKSLHIPTVISLFDWVIYLESEKKFEKELKKMTGQTVGDIYTEDVESVKSTSLL 111
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+ A ++ K +PVVD KLVG+I+R +++R +
Sbjct: 112 SEVADIMSSKKIHAVPVVDD-KKLVGVISRIDLIRTMI 148
>gi|330468206|ref|YP_004405949.1| cbs domain-containing membrane protein [Verrucosispora maris
AB-18-032]
gi|328811177|gb|AEB45349.1| cbs domain containing membrane protein [Verrucosispora maris
AB-18-032]
Length = 233
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 15/156 (9%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
+ V D MT+ D+ V T + ++ L E+R++ PV+DD ++GVVS+ DLL
Sbjct: 3 AWQVEDVMTR--DVATVVEQTPYRQIVDLLAERRVSAVPVVDDFGHVLGVVSEADLLHKV 60
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV--VGDLMTPAPLVVHENTNLEDA 189
G + F ++ S+ G+ +LMT + +T+L A
Sbjct: 61 EWMGEPHE-----------RRVFEGARQRRSRRKGEADNARELMTTPAVTTSPHTSLVAA 109
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
A+L+ + +RLPVVD G++VG++TR +++R L+
Sbjct: 110 AKLMDREQVKRLPVVDDMGRVVGIVTRSDLLRVHLR 145
>gi|294775656|ref|ZP_06741164.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|319642193|ref|ZP_07996853.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345518194|ref|ZP_08797649.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423314878|ref|ZP_17292810.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
gi|254836462|gb|EET16771.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294450500|gb|EFG18992.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|317386179|gb|EFV67098.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392681060|gb|EIY74422.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
Length = 491
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+K +TV +AL + E RI G PV+DD+ LVG+V++ DL
Sbjct: 104 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDLR------------------- 144
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
K K + ++MT +V +++T++E A+R+L E K +LPVVD
Sbjct: 145 -------------FEKDMDKRIDEVMTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDK 191
Query: 207 YGKLVGLITRGNVVRA 222
GKLVGLIT ++ +A
Sbjct: 192 EGKLVGLITYKDITKA 207
>gi|403718964|ref|ZP_10943565.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
gi|403208215|dbj|GAB98248.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
Length = 199
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Query: 86 HAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFP 145
++V+ + +D+AL+ + E+++T PV+D+ LVGV+S+ DLL ++ P
Sbjct: 12 YSVRPDSEIDDALQLMAERKVTALPVVDEGEVLVGVLSEIDLLR-----------RAVEP 60
Query: 146 NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+ + E S + VG++MT AP E +++ D L + ++ LPVV
Sbjct: 61 DRRAHVLPVQE-----SAPLPRTVGEIMTSAPRSTTEGSDVADLITLFTTSSFKSLPVVR 115
Query: 206 GYGKLVGLITRGNVVRA 222
G +LVG+I+R +V+RA
Sbjct: 116 G-NQLVGVISRSDVIRA 131
>gi|410464699|ref|ZP_11318104.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982185|gb|EKO38669.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 413
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ +V T + E +E L+ + + PV+D K+VGVV+ DLL GG SL
Sbjct: 119 DVASVGPDTDLAEVVELLLSRHVKAVPVVDGGRKVVGVVTGGDLLT----RGGLSARLSL 174
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
F + + + + +G V ++MT + E T+L +A+ +++ +RLPV
Sbjct: 175 FGLLPADAREEAA-----AALSGHTVTEVMTSPAETIGERTSLREASERMVKRGLKRLPV 229
Query: 204 VDGYGKLVGLITRGNVVRAALQI 226
VD G+L+G+++R +++RAA ++
Sbjct: 230 VDEAGELIGIVSRTDILRAAAKV 252
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALD 131
+TV + MT + + T++ EA ER+V++ + PV+D+ +L+G+VS D+L A
Sbjct: 193 HTVTEVMTSPAE--TIGERTSLREASERMVKRGLKRLPVVDEAGELIGIVSRTDILRAAA 250
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ G T P + L+ + ++ D+ T P + +L D A
Sbjct: 251 KVPAGA---TEAMPRFTAG---------LMQQARDVLITDVPTARP-----DESLLDVAA 293
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
L+ + RR+ V+D GK+ G++ G+++ KR G
Sbjct: 294 RLVASPLRRVVVLDAAGKVAGIVHDGDLLARCGPAKRPG 332
>gi|330507501|ref|YP_004383929.1| CBS domain-containing protein [Methanosaeta concilii GP6]
gi|328928309|gb|AEB68111.1| CBS domain protein [Methanosaeta concilii GP6]
Length = 160
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL--- 143
+V+ + V EA L E +I+G PV+D + +LVG+VS+ DLL L S+ ++ L
Sbjct: 13 SVQASANVSEAARLLKENKISGMPVLDGE-RLVGIVSESDLLRLLSVEDESEGSLWLPSP 71
Query: 144 FPNVNSTWKTFNELQRL---LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
F ++ + +R+ L + K V D+M+ + + ++E+AA ++ + R
Sbjct: 72 FEIFEVPFRDLVKWERMRSSLKEIPEKEVADVMSRNLHEIGPDDSIEEAASIMTRHRINR 131
Query: 201 LPVVDGYGKLVGLITRGNVV 220
LPVV+ G+LVG++TRG+++
Sbjct: 132 LPVVED-GRLVGIVTRGDII 150
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
V D+M P+ V + N+ +AARLL E K +PV+DG +LVG+++ +++R
Sbjct: 3 VRDVMNVMPVSVQASANVSEAARLLKENKISGMPVLDGE-RLVGIVSESDLLR 54
>gi|357414752|ref|YP_004926488.1| hypothetical protein Sfla_5576 [Streptomyces flavogriseus ATCC
33331]
gi|320012121|gb|ADW06971.1| CBS domain containing membrane protein [Streptomyces flavogriseus
ATCC 33331]
Length = 209
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT AV + + E ++ L +++ PV+ + +++GVVS+ DLL ++
Sbjct: 6 HIVSDLMTHTP--VAVGSQASYKEIVQLLNRWKVSALPVLAGEGRVIGVVSEADLLPKEA 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ D P T +K DLM+ + VH + L +AAR+
Sbjct: 64 ----RRPDEGAAPANAPTDA---------AKAGAVRAEDLMSSPAITVHADAPLAEAARI 110
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ + +RLPVVDG G L G+I+RG++++ L+ D
Sbjct: 111 MARRRVKRLPVVDGGGLLEGIISRGDLLKVFLRSDED 147
>gi|320353215|ref|YP_004194554.1| hypothetical protein Despr_1091 [Desulfobulbus propionicus DSM
2032]
gi|320121717|gb|ADW17263.1| CBS domain containing membrane protein [Desulfobulbus propionicus
DSM 2032]
Length = 151
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT+ ++ V T+V E L+ +I+G PV+D+ K++GVV++ DL+
Sbjct: 6 DIMTR--EVITVNARTSVRELAALLLSHKISGAPVVDEAGKVIGVVTESDLI-------- 55
Query: 137 NQNDTSLFPNVNSTWKTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
QN P + F + ++ L K G VGD+ + + V T+LE+ A
Sbjct: 56 FQNKKVHLPTAFAILDAFVFLEPPDRMKEELRKMAGTRVGDICSTPLISVGPETDLEELA 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L+ E K LPV+ G LVG+I + +++R Q
Sbjct: 116 TLMAEKKMHTLPVM-AEGTLVGVIGKSDIIRTIAQ 149
>gi|294101984|ref|YP_003553842.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
gi|293616964|gb|ADE57118.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
Length = 152
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
G+ M + DL AV + +A+ L ++G PV+ +DW+LVG +S+ D+L
Sbjct: 4 CAGELMHR--DLTAVMEEDLIQDAVHILYSHNLSGIPVVKEDWELVGYLSETDILQAAIP 61
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ S F N N + + L KVV + MT P V + +L A L+
Sbjct: 62 TYLEILAQSSFLN-NGEIHLVDRFKNL----GKKVVREFMTKNPYSVPPSASLMTVADLM 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
L K +RLPVV+G KL+G+I R ++ +RD E
Sbjct: 117 LRKKIKRLPVVEG-NKLIGIINREAFCEYVME-ERDSE 152
>gi|387906284|ref|YP_006336621.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387581176|gb|AFJ89890.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 230
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
V E + LVE I+ PV D D KL+G++S+ DL+ I G + + + S+
Sbjct: 20 VQETAKLLVEHSISAVPVADADGKLIGIISEGDLVRRVEIGTGARRRSWWLELLASS--- 76
Query: 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGL 213
EL K + + V DLM+ + V E+T L + A LL + +R+PVV K+ GL
Sbjct: 77 -RELASQYVKEHAQTVKDLMSINVVTVDEDTPLSEVAELLERYRIKRVPVVKN-DKVTGL 134
Query: 214 ITRGNVVRA 222
++R ++VRA
Sbjct: 135 VSRADLVRA 143
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
D+MT + +++ A+LL+E +PV D GKL+G+I+ G++VR
Sbjct: 5 DVMTTPVIFATPEMGVQETAKLLVEHSISAVPVADADGKLIGIISEGDLVR 55
>gi|386401293|ref|ZP_10086071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385741919|gb|EIG62115.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 242
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T++ EA ++++ ++G V+DD KLVGVVS+ D + I G + L
Sbjct: 13 SVTPDTSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFIRRSEIGTGRKRGRWLRFI 72
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ S + + +G+ V ++MT +P+ + E+T L + L+ +RLPV+ G
Sbjct: 73 LGSGKSASDFVHE-----HGRKVSEVMTRSPVTLTEDTALAEIVDLMERNNVKRLPVIRG 127
Query: 207 YGKLVGLITRGNVVRAALQIKRD 229
K+VG+++R N+++A + RD
Sbjct: 128 -DKIVGIVSRANLLQAVADLARD 149
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + + V +T++ +AA ++L+ L VVD GKLVG+++ G+ +R
Sbjct: 6 IMTRSVISVTPDTSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFIR 55
>gi|448417455|ref|ZP_21579391.1| zn-dependent protease [Halosarcina pallida JCM 14848]
gi|445677943|gb|ELZ30439.1| zn-dependent protease [Halosarcina pallida JCM 14848]
Length = 392
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 30/161 (18%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT++ L V T+V E L+R+ +R TG+PV+ + LVG+V+
Sbjct: 249 TVRDIMTERNRLDVVDVRTSVAELLDRMFRERHTGYPVMKNG-HLVGMVT---------- 297
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
ND ++ NE++R + +VGD+M+ V + N DA ++
Sbjct: 298 ----LNDA----------RSVNEVER-----DAYLVGDVMSGELTTVLPDANAMDAITVM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
E RLPVVD G+LVGLI+R ++V A I+ G T
Sbjct: 339 QENGVGRLPVVDESGELVGLISRSDLVTALNIIQSRGSLPT 379
>gi|440699098|ref|ZP_20881403.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278404|gb|ELP66442.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 240
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 15/127 (11%)
Query: 105 RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LS 162
+++ PV+D + +++GVVS+ DLL + +S + +L RL L
Sbjct: 36 KVSALPVLDGEERVIGVVSEADLLPKEGFR-------------DSDPDRYTQLHRLSDLI 82
Query: 163 KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K +LMT + VH + L AAR++ ++ +RLPVVDG G L G+++R ++++
Sbjct: 83 KAGAVTAQELMTAPAITVHPDATLARAARVMARSRVKRLPVVDGRGLLKGVVSRSDLLKV 142
Query: 223 ALQIKRD 229
L+ D
Sbjct: 143 FLRDDED 149
>gi|410696692|gb|AFV75760.1| putative transcriptional regulator, contains C-terminal CBS domains
[Thermus oshimai JL-2]
Length = 150
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ + V T++ A E L+EKR G PV+D + +L+G++ DLL
Sbjct: 3 VQDLMTQ--NPVCVGPEETLERAAEILLEKRYGGLPVVDGEGRLLGLLQVEDLLP----- 55
Query: 135 GGNQNDTSLFPNVNSTWKTFNE------LQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ + F +V + W+ F E L+ + + V M VH L +
Sbjct: 56 ---RPENIPFSDVEA-WQLFGEWVDEGVLEEIYRRYQKTPVEAAMQREIPRVHPEDPLGE 111
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
A R+L+ T R LPVVDG G++VG+ITR + ++ L+
Sbjct: 112 ALRILVTTGVRHLPVVDGEGRVVGIITRSDFLKFFLR 148
>gi|398787517|ref|ZP_10549911.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
gi|396992876|gb|EJJ03965.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
Length = 202
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 75 VGDFMTKKEDLHAV--KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ D MT HAV + TT E L E IT PV+D+D ++VGVVS+ DLL
Sbjct: 1 MADLMTP----HAVVVQRGTTFKEIARLLDEYEITAVPVVDEDEQVVGVVSEADLL---- 52
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+R ++K +MT +V ++ +AA+L
Sbjct: 53 -------------------------RRQIAKLGSTTAEAIMTSPAVVARPGWSVVEAAKL 87
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ + K +RLPV+D G+L+G+I+R ++VR L ++RD
Sbjct: 88 MEQKKVKRLPVIDDAGRLIGVISRSDLVR--LFLRRD 122
>gi|78357089|ref|YP_388538.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219494|gb|ABB38843.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 150
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 96 EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS--TWKT 153
EA + ++E + G PV+DD KLVGV+ DL+A N SLF ++ K+
Sbjct: 23 EATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLVA----QQKKVNLPSLFTILDGFIPLKS 78
Query: 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGL 213
+++ + K V D MT P V +T L++ A L++++KY LPVV G LVG+
Sbjct: 79 LSDMDSEMRKVAATRVSDAMTDNPATVTPDTPLDEVATLMVDSKYYTLPVVKD-GILVGV 137
Query: 214 ITRGNVVR 221
+ + +V+R
Sbjct: 138 VGKEDVLR 145
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+M+ P+ V + ++ +A +L+LE K+ LPVVD GKLVG++ + ++V
Sbjct: 6 DIMSADPVTVAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLV 55
>gi|169830475|ref|YP_001716457.1| hypothetical protein Daud_0264 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637319|gb|ACA58825.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 153
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ++ V V++ + L+E I+G PV+D+ KLVGVV++ DL+ +
Sbjct: 8 DIMTS--EVITVHPEDDVEKVAQLLLEHHISGLPVVDEGGKLVGVVTEGDLVFRE----- 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLS---KTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ L+ V + + +R + +T + VGDLM+ V +ED A ++
Sbjct: 61 KKVRAPLYVMVFDSLIYLEKPKRFIEEIRRTVAQKVGDLMSTKLYTVGPEAPIEDVATII 120
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
++ R+PVVD +L+G+I+R +++RA
Sbjct: 121 VDRGINRVPVVDAENRLLGIISRQDIIRATF 151
>gi|254431490|ref|ZP_05045193.1| CBS [Cyanobium sp. PCC 7001]
gi|197625943|gb|EDY38502.1| CBS [Cyanobium sp. PCC 7001]
Length = 145
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T + EA++ + E I G PV+D LVG +++ DL+ +S G + + +
Sbjct: 7 SVGVDTPLQEAVKLMSEHHIGGMPVLDQAGSLVGELTEQDLMVRES--GFDAGPYVMLLD 64
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ + R + + G VG++M + L AAR L E+ +RL VVDG
Sbjct: 65 AVIYLRNPLQWDRQVHQVLGSTVGEVMRKGSHTCSADLPLPAAARQLHESATQRLFVVDG 124
Query: 207 YGKLVGLITRGNVVRA 222
G+ VG++TRG+VVRA
Sbjct: 125 DGRPVGVLTRGDVVRA 140
>gi|344203160|ref|YP_004788303.1| hypothetical protein [Muricauda ruestringensis DSM 13258]
gi|343955082|gb|AEM70881.1| CBS domain containing membrane protein [Muricauda ruestringensis
DSM 13258]
Length = 153
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 84/160 (52%), Gaps = 26/160 (16%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P+ V D+MT+ DL +++E +E L+ +I+G PV++++ +L+G++S+ D
Sbjct: 15 PKEIPLKVSDYMTR--DLITFSPDQSIEEVIEALIRHKISGGPVVNENNELIGIISEGDC 72
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
+ S S + L SK +++ ++ T + N N+
Sbjct: 73 IKHISDS------------------RYYNLPMEHSKVELRMIKNVET-----IDGNMNIF 109
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
DAA++ LE + RR P+++ GKLVG I++ ++++A + IK
Sbjct: 110 DAAKMFLEVRRRRFPILEN-GKLVGQISQKDILKATMGIK 148
>gi|429199532|ref|ZP_19191284.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428664855|gb|EKX64126.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 225
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + AV E + + + +++ PV++ + +++GVVS+ DLL +
Sbjct: 6 HIVSDVMTQT--VVAVGRDAPFKEIVRTMEQWKVSAMPVLEGEGRVIGVVSEADLLPKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
D SL+ E QRL ++K DLM+ + VH + L AA
Sbjct: 64 F---RDTDPSLY----------EERQRLSDVAKAGAVTAEDLMSTPAITVHPDVTLAHAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
R++ +RLPVVD G L G+++R ++++ L+
Sbjct: 111 RIMAVRHVKRLPVVDDVGMLQGIVSRADLLKVFLR 145
>gi|21218726|ref|NP_624505.1| hypothetical protein SCO0169 [Streptomyces coelicolor A3(2)]
gi|5748631|emb|CAB53136.1| conserved hypothetical protein SCJ1.18 [Streptomyces coelicolor
A3(2)]
Length = 217
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 105 RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LS 162
+++ PV++ + +++G+VS+ DLL + + + F +++RL L+
Sbjct: 25 KVSALPVLEGEGRVIGLVSEADLLPKEEFRDSDPD-------------RFTQMRRLTDLA 71
Query: 163 KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K G D+MT + VH + L AAR++ + K +RLPVV+ G L G+++R ++++
Sbjct: 72 KAGGLTAADVMTAPAVTVHPDATLAQAARIMAQRKVKRLPVVNAEGLLEGVVSRADLLKV 131
Query: 223 ALQ 225
L+
Sbjct: 132 FLR 134
>gi|298291193|ref|YP_003693132.1| hypothetical protein Snov_1194 [Starkeya novella DSM 506]
gi|296927704|gb|ADH88513.1| CBS domain containing membrane protein [Starkeya novella DSM 506]
Length = 228
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 89 KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148
KTT V + + L+E+RI+G P++DD K+VG+VS+ DL+ + L V+
Sbjct: 15 KTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIRRAEAGTERRRSWWLQAFVD 74
Query: 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG 208
L K +G+ D+M P+ +T L + A L+ +R+P+V+ G
Sbjct: 75 D-----GTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVE-KG 128
Query: 209 KLVGLITRGNVVRA 222
LVG+++R N+++A
Sbjct: 129 HLVGIVSRSNLIQA 142
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 171 DLMTPAPLVVHENTNLE-DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+MT +P++ + T+L A+ LLE + +P+VD GK+VG+++ G+++R A
Sbjct: 5 DVMT-SPVITAKTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIRRA 57
>gi|436842251|ref|YP_007326629.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432171157|emb|CCO24528.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 151
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T + A + L++K + G PV+D +LVGV+ DL+A Q + P++ +
Sbjct: 19 TEIGAAAKLLLDKHLNGVPVVDKAGELVGVICQSDLVA--------QQKSISMPSLFTIL 70
Query: 152 KTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
F ++L+R ++K V MTP P+ V +T++E A L++E K LPVV+
Sbjct: 71 DGFIPLSSNDDLEREVNKIAATKVAHAMTPDPVTVTPDTSIEKIADLMVERKLYTLPVVE 130
Query: 206 GYGKLVGLITRGNVVR 221
GKL+G++ + +V++
Sbjct: 131 D-GKLIGVVGKEDVLK 145
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MT L + T + AA+LLL+ +PVVD G+LVG+I + ++V
Sbjct: 6 DIMTSGALTLEPETEIGAAAKLLLDKHLNGVPVVDKAGELVGVICQSDLV 55
>gi|365893976|ref|ZP_09432141.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425300|emb|CCE04683.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 141
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T G++MT+ D+ V TTV E E L +PV D+D ++G+V+ +D+L +
Sbjct: 8 TAGNYMTR--DVKTVTRDTTVRELSEMLDRDDFNSYPVTDND-AVIGIVTKFDMLRCFAF 64
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ N +++L + V D+MT + V +T L +L+
Sbjct: 65 TQ------------NQMLPQYSDLM-------NRKVSDIMTTEFIYVRPDTKLTRVLQLM 105
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+E + R LPV DG +LVG+I R ++VRA
Sbjct: 106 VEHRIRSLPVTDGENRLVGIIAREDIVRA 134
>gi|307354738|ref|YP_003895789.1| putative signal transduction protein [Methanoplanus petrolearius
DSM 11571]
gi|307157971|gb|ADN37351.1| putative signal transduction protein with CBS domains
[Methanoplanus petrolearius DSM 11571]
Length = 162
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 83/155 (53%), Gaps = 13/155 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT D V+ V EA L ++RI G PV+D + +L G+V++ DLL+L +
Sbjct: 3 VKDVMTP--DPVTVQADAKVSEAASILRKRRIGGIPVMDGE-RLAGIVTETDLLSL--LD 57
Query: 135 GGNQNDTSLFPN----VNSTWKTF---NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
G +D P+ + + F + ++ L+ + + D+M+ + + EN +E
Sbjct: 58 VGELSDDLWLPSPLEIIEIPIREFVNWEKTRKALTDISESPISDIMSTDVIYIDENAEIE 117
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+AA+L+L RLPVV +LVG++TR ++VR
Sbjct: 118 EAAKLMLSEGIARLPVVKS-DRLVGIVTRQDIVRG 151
>gi|39937306|ref|NP_949582.1| CBS/transport-associated domain-containing protein
[Rhodopseudomonas palustris CGA009]
gi|192293086|ref|YP_001993691.1| signal transduction protein with CBS domains [Rhodopseudomonas
palustris TIE-1]
gi|39651164|emb|CAE29687.1| CBS domain:Transport-associated domain [Rhodopseudomonas palustris
CGA009]
gi|192286835|gb|ACF03216.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 26/160 (16%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN 137
MT++ L + ++ +A +++ ++G PV+DDD KL+G++S+ D + I G
Sbjct: 6 IMTRQ--LVTIGPEASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIRRAEI--GT 61
Query: 138 QNDTSLFPNVNSTWKTFNELQRLLS---------KTNGKVVGDLMTPAPLVVHENTNLED 188
Q W L+ LL +G+ VG++MT P + E+T++E
Sbjct: 62 QRK-------RGRW-----LRMLLGPGTCAGDFVHEHGRKVGEVMTQHPYTISEDTSIET 109
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L+ + +R PV+ G LVG++TR N++RA + R
Sbjct: 110 IVKLMEKHHVKRFPVMRG-DLLVGIVTRKNLLRAVADLAR 148
>gi|52632001|gb|AAU85401.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 187
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN---VNSTWKTFNEL 157
L E +I G PV+++ ++VGV+S+ D+L L TS+F +N + +++
Sbjct: 62 LKENKIAGVPVLNEREEVVGVISEADVLKL---LENFHWYTSIFTAHDLMNIFGEDLHDV 118
Query: 158 QRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRG 217
Q+ + K + V D+M+ P V +T ++DAA+++ T + RLPVVD KLVG++ R
Sbjct: 119 QQDIEKASKMKVKDVMSKKPETVPPDTLIDDAAQIMHSTGFNRLPVVDENDKLVGIVARA 178
Query: 218 NVV 220
+++
Sbjct: 179 DII 181
>gi|392410785|ref|YP_006447392.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
gi|390623921|gb|AFM25128.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
Length = 149
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 16/153 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D MT+ ++ V T + E L EKRI G PV+D+D ++GVV + DL+
Sbjct: 4 IADIMTR--EVITVTPDTPIRELARILAEKRINGVPVVDEDGTVLGVVCESDLIE----Q 57
Query: 135 GGNQNDTSLFPNVNS------TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
G + ++F ++S W+ E +R+ T KV PA + V +++ +
Sbjct: 58 GRPLHIPTVFVILDSFIPLENPWRLQKEFKRI---TATKVEEIYSRPA-VCVSPESDVSE 113
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
AA+L+ E KY +PV D +LVG++ + +V+R
Sbjct: 114 AAKLMSEKKYYTIPVCDDADRLVGVLGKVDVIR 146
>gi|172040076|ref|YP_001799790.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium urealyticum
DSM 7109]
gi|171851380|emb|CAQ04356.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium urealyticum
DSM 7109]
Length = 519
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 36/127 (28%)
Query: 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
T VDE R RI+G PV+D+D L+G++++ D+
Sbjct: 127 TIEEVDEICGRF---RISGLPVVDEDQTLLGIITNRDM---------------------- 161
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA-RLLLETKYRRLPVVDGYG 208
+R +++ V ++MTP PLVV E DAA RLL E K +LP+VDG G
Sbjct: 162 ------RFERDINRP----VREVMTPMPLVVAEQGVSADAALRLLSENKVEKLPIVDGAG 211
Query: 209 KLVGLIT 215
KL GLIT
Sbjct: 212 KLTGLIT 218
>gi|448823063|ref|YP_007416228.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium urealyticum
DSM 7111]
gi|448276560|gb|AGE35984.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium urealyticum
DSM 7111]
Length = 519
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 36/127 (28%)
Query: 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
T VDE R RI+G PV+D+D L+G++++ D+
Sbjct: 127 TIEEVDEICGRF---RISGLPVVDEDQTLLGIITNRDM---------------------- 161
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA-RLLLETKYRRLPVVDGYG 208
+R +++ V ++MTP PLVV E DAA RLL E K +LP+VDG G
Sbjct: 162 ------RFERDINRP----VREVMTPMPLVVAEQGVSADAALRLLSENKVEKLPIVDGAG 211
Query: 209 KLVGLIT 215
KL GLIT
Sbjct: 212 KLTGLIT 218
>gi|297568229|ref|YP_003689573.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924144|gb|ADH84954.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 150
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQR- 159
L E+RI+G PV+D+ +LVGVV++ DL+ +Q P + + L+R
Sbjct: 28 LWERRISGAPVVDEQGELVGVVTESDLI--------DQAKKLHIPTAIAVLEAVIYLERG 79
Query: 160 -----LLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
L+K G V D+ T P V +T L++ A ++ E LPV+D GKLVG++
Sbjct: 80 RKVEEELNKMAGSTVKDICTTKPATVAPDTPLDEIATVMAEKHLHTLPVMD-RGKLVGVV 138
Query: 215 TRGNVVRA 222
+ +V+RA
Sbjct: 139 GKADVIRA 146
>gi|89092537|ref|ZP_01165490.1| hypothetical protein MED92_14563 [Neptuniibacter caesariensis]
gi|89083049|gb|EAR62268.1| hypothetical protein MED92_14563 [Oceanospirillum sp. MED92]
Length = 135
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 29/155 (18%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISG 135
D+M EDL T + EA+ +L+E RITG PV+D D L+G++S+ D L A+ ++
Sbjct: 9 DYMC--EDLITFTPETDLFEAINKLLEYRITGAPVVDKDGNLIGLMSEVDCLKAILTL-- 64
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
T++E + G VG M+ ++ + ++ A +
Sbjct: 65 -----------------TYHE------EEMGGRVGTYMSDEVYTINHDADIIKVAEEFIN 101
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
K RRLPVV GKL+G I+R +V+RA Q +DG
Sbjct: 102 NKRRRLPVVKD-GKLIGQISRRDVLRAVEQFAQDG 135
>gi|410720304|ref|ZP_11359660.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
gi|410601086|gb|EKQ55606.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
Length = 158
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN-------DTSLFPNVNSTWKT 153
L E +I+G PV++ + +LVG++S+ D++ L + + D P V ++
Sbjct: 28 LRENKISGAPVMNKEGQLVGIISEGDIMRLLEVHSPHIRLILPSPLDLIELP-VRMKYE- 85
Query: 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGL 213
+E+ ++K ++G++MT + + + ++ DAA+L+ +RLPV+D GK+VG+
Sbjct: 86 MDEIAEDMNKAASLLIGEIMTKKVVTITPDADISDAAQLMDTHDVKRLPVLDSDGKMVGI 145
Query: 214 ITRGNVVRAALQ 225
ITRG+++ A ++
Sbjct: 146 ITRGDIIGAMVR 157
>gi|383762105|ref|YP_005441087.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382373|dbj|BAL99189.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 286
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V+T T + E L I+G PV+D+ KLVGVV+D+DL+ ++ + L +
Sbjct: 14 VRTDTRIPEVARLLRAHDISGMPVLDETGKLVGVVTDHDLILRNAPIREPRYFAVLSGYI 73
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ + + L T GD++ P V +T LE+A L+L + LPV+D
Sbjct: 74 PLNLEEYRHYREQLRHTMAVTAGDMVEPDIPTVTPDTPLEEAMELMLNPQVTILPVLD-E 132
Query: 208 GKLVGLITRGNVVRAALQIK 227
G++VG++TR ++VR Q++
Sbjct: 133 GEVVGVVTRTDLVRLIEQLE 152
>gi|404450120|ref|ZP_11015106.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
gi|403764319|gb|EJZ25224.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
Length = 152
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 24/130 (18%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
++D L+ L +++I+G PVI+ D KLVG++S+ D L I G ++T FP
Sbjct: 38 SIDHVLDMLTKRKISGAPVINHDKKLVGIISEVD--CLKEIIKGKYSNTPSFPG------ 89
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
K + D++T +P +L DAA+ LE K RR PV+ G+LVG
Sbjct: 90 ----------KVEEHMTKDVITLSP-----EMSLFDAAQKFLELKIRRFPVLKD-GQLVG 133
Query: 213 LITRGNVVRA 222
I+ +++RA
Sbjct: 134 QISLSDIIRA 143
>gi|298206971|ref|YP_003715150.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
gi|83849605|gb|EAP87473.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
Length = 154
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 33/176 (18%)
Query: 60 VGITNSV----PPRNGT---YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVI 112
+GI+N + P G+ TV D+M++K L + V E ++ LV+ +I+G PV+
Sbjct: 1 MGISNYMGRRAKPTKGSKEQITVSDYMSRK--LVTFTPSQNVMEVIQTLVKHKISGGPVV 58
Query: 113 DDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDL 172
+D +LVG++S+ D + Q S + N+ T + +V D+
Sbjct: 59 NDQNELVGIISEGDCI--------KQISDSRYHNLPMDDATVEK----------HMVRDV 100
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
T + N N+ DAA L K RR P+V+ GKLVGLI++ ++++AAL +K+
Sbjct: 101 ET-----IDGNMNIFDAANQFLSAKRRRFPIVE-EGKLVGLISQKDILKAALNLKQ 150
>gi|441181333|ref|ZP_20970234.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440614273|gb|ELQ77565.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 241
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 89 KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148
++ T+ E + L R TG PV+D D K++GV+S+ DL+ + QN
Sbjct: 18 RSGTSFREVVNLLGRHRKTGLPVVDADGKVLGVISETDLMFRQAAQDILQN--------- 68
Query: 149 STWKTFNEL----QRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
W L + ++ G G+LMT P+ + + ++ +AARL++ K RLPVV
Sbjct: 69 -RWYNRRRLTGSARAARARKRGLRAGELMTSPPVTIGPHQSVTEAARLMVTGKLDRLPVV 127
Query: 205 DGYGKLVGLITRGNVVRAALQ 225
D G+L GL+TR ++++ L+
Sbjct: 128 DAEGRLCGLVTRTDLLKVFLR 148
>gi|410029632|ref|ZP_11279462.1| hypothetical protein MaAK2_10523 [Marinilabilia sp. AK2]
Length = 152
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 24/135 (17%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
++D LE L +++I+G PV+D D +L+G++S+ D L I G ++T FP
Sbjct: 38 SIDHVLEVLTKRKISGAPVVDKDGRLIGIISEVD--CLKEIIKGKYSNTPKFPG------ 89
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
V D MT + + +L DAA+ LE K RR PV+ +LVG
Sbjct: 90 ---------------TVADHMTEDVFTLSPDLSLFDAAQKFLELKIRRFPVLKD-DRLVG 133
Query: 213 LITRGNVVRAALQIK 227
I+ +V+RA ++K
Sbjct: 134 QISLSDVIRAFPKLK 148
>gi|381190949|ref|ZP_09898461.1| hypothetical protein RLTM_08259 [Thermus sp. RL]
gi|384431655|ref|YP_005641015.1| putative signal transduction protein [Thermus thermophilus
SG0.5JP17-16]
gi|333967123|gb|AEG33888.1| putative signal transduction protein with CBS domains [Thermus
thermophilus SG0.5JP17-16]
gi|380451038|gb|EIA38650.1| hypothetical protein RLTM_08259 [Thermus sp. RL]
Length = 150
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 13/154 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA-LDSI 133
V D MT +D + T++EA R++E R GFPV+D + KL+GVV +LL +++
Sbjct: 3 VRDLMT--QDPVVLGPEATLEEAARRILETRYGGFPVVDGEGKLLGVVQVEELLPHPENV 60
Query: 134 SGGNQNDTSLFPNVNSTW---KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ LF W E+ R +T K V P VH + L A
Sbjct: 61 PFSDVEALQLF----GEWVDEDVLAEIYRRYQRTPVKAVMRTEIPK---VHPDDPLGKAL 113
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+++L T R LPVVD GK+VG++TR + ++ L
Sbjct: 114 KVVLTTDLRHLPVVDEEGKVVGILTRSDFLKLIL 147
>gi|456386465|gb|EMF52001.1| hypothetical protein SBD_6523 [Streptomyces bottropensis ATCC
25435]
Length = 242
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+TVGD MT +++ T + + L RI+G PV+D D K+VGVVS DL
Sbjct: 10 HTVGDVMT--DEVVQAHRETPFKDVVRLLDAHRISGMPVVDHDDKVVGVVSGTDL----- 62
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ G + + R + G+LM+ + VH + +AAR+
Sbjct: 63 VRGQAARADGRLDRRHRMPRLRRPGHRAAAGVFATTAGELMSTPAITVHPEQPVPEAARV 122
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ RLPVVD +L+G+ TR +++R L+ D R
Sbjct: 123 MERHGIERLPVVDEEDRLIGIATRRDLLRVFLRTDEDIRR 162
>gi|398787641|ref|ZP_10549996.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
gi|396992804|gb|EJJ03897.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
Length = 231
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ + A+ E +E + +++ PV+ + +++GVVS+ DLL +
Sbjct: 7 TVRDVMTQA--VVAIGQEAGFKEIVETMQRWKVSALPVLAGEGRVIGVVSEADLLLKEEF 64
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQR--LLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ D P+ +L+R + K G G+LM+ L VH L AAR
Sbjct: 65 ---RETD----PD------RMEQLRRSDAVRKAGGVTAGELMSSPALTVHAGDTLAQAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ +RLPVVDG G L G+I+R ++++ L+ D
Sbjct: 112 TMAYKSVKRLPVVDGAGLLQGIISRSDLLKVFLRSDED 149
>gi|300245699|gb|ADJ93907.1| putative phenylphosphate synthetase stimulating protein [Clostridia
bacterium enrichment culture clone BF]
Length = 228
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+M K D+ V T++ A L E I PV+ KL+G+V+D D+
Sbjct: 3 IRDWMAK--DVLTVDENTSLMRATRILKENSIRRLPVVSH-GKLIGIVTDRDV------- 52
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
D S P+ +T +EL LLS+ V D+MT PL + E+ LE AA ++L
Sbjct: 53 ----KDAS--PS-KTTSLDIHELYYLLSEMK---VKDVMTSNPLTLSEDDTLEKAALVML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
E K LPVVDG G LVGL++ +V+R +
Sbjct: 103 EDKISGLPVVDGLGHLVGLLSETDVLRGFIH 133
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D M L V ENT+L A R+L E RRLPVV +GKL+G++T +V A+
Sbjct: 2 LIRDWMAKDVLTVDENTSLMRATRILKENSIRRLPVV-SHGKLIGIVTDRDVKDAS 56
>gi|296132180|ref|YP_003639427.1| hypothetical protein TherJR_0656 [Thermincola potens JR]
gi|296030758|gb|ADG81526.1| CBS domain containing membrane protein [Thermincola potens JR]
Length = 150
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MTK ++ + TV E + L +K+I+G PV+D+ K+VG+V++ DLL
Sbjct: 5 DIMTK--EVITARPEQTVREVAKILADKKISGVPVVDEAGKIVGIVTEADLLV------- 55
Query: 137 NQNDTSLFPNVNST------WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
Q P+ + E + L K V D+MT + V E+ +ED A
Sbjct: 56 -QTQKLKVPSYVQLLGGIIYLDSVKEFEEDLRKAVAVQVKDIMTTDVVTVEEDAEIEDIA 114
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + RLPVV G LVG+++R ++V+A
Sbjct: 115 TTMADEGINRLPVVRD-GALVGIVSRADIVKA 145
>gi|392410314|ref|YP_006446921.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390623450|gb|AFM24657.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 245
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 20/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M+K D+ ++ T T+ A+ EK I+ PV++ KLVG+V+D DL
Sbjct: 3 VKDWMSK--DVTSLNITDTLQHAINLSSEKNISIMPVLES-GKLVGIVTDRDL------- 52
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ P+ ++T E++ LS+ VG +MTP P++V + +E+ A +LL
Sbjct: 53 ------KRVSPS-DATRLNVEEIKYRLSRVE---VGTIMTPHPIIVPPDYTIEETAEILL 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
K +PVVD G ++G+IT+ ++ +A + +
Sbjct: 103 TNKISGVPVVDDKGTILGVITKNDLFKAMMSL 134
>gi|148378202|ref|YP_001252743.1| hypothetical protein CBO0199 [Clostridium botulinum A str. ATCC
3502]
gi|153930979|ref|YP_001382603.1| hypothetical protein CLB_0240 [Clostridium botulinum A str. ATCC
19397]
gi|153936233|ref|YP_001386155.1| hypothetical protein CLC_0255 [Clostridium botulinum A str. Hall]
gi|153940514|ref|YP_001389562.1| hypothetical protein CLI_0264 [Clostridium botulinum F str.
Langeland]
gi|168177532|ref|ZP_02612196.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|170756627|ref|YP_001779830.1| hypothetical protein CLD_0576 [Clostridium botulinum B1 str. Okra]
gi|226947420|ref|YP_002802511.1| CBS domain-containing protein [Clostridium botulinum A2 str. Kyoto]
gi|384460642|ref|YP_005673237.1| hypothetical protein CBF_0232 [Clostridium botulinum F str. 230613]
gi|421838951|ref|ZP_16272654.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|429243973|ref|ZP_19207455.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
gi|148287686|emb|CAL81751.1| conserved hypothetical membrane [Clostridium botulinum A str. ATCC
3502]
gi|152927023|gb|ABS32523.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152932147|gb|ABS37646.1| CBS domain protein [Clostridium botulinum A str. Hall]
gi|152936410|gb|ABS41908.1| CBS domain protein [Clostridium botulinum F str. Langeland]
gi|169121839|gb|ACA45675.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
gi|182670387|gb|EDT82361.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|226844378|gb|ACO87044.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
gi|295317659|gb|ADF98036.1| CBS domain protein [Clostridium botulinum F str. 230613]
gi|409736556|gb|EKN37942.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|428758893|gb|EKX81284.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
Length = 138
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 34/157 (21%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT +++ V +V++A + + E + P+ D++ K+VGV++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVA 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G+ N+ VGD+MT P+V +++ ++ DAAR++
Sbjct: 59 KGSDNNIK--------------------------VGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
E + RRLPV D +VG+++ G++ A++ K + E
Sbjct: 93 ERQIRRLPVEDNQN-IVGIVSLGDI---AIEPKHENE 125
>gi|451981772|ref|ZP_21930117.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
gi|451760982|emb|CCQ91382.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
Length = 150
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT+K + VK T+ E +E R+ GFPV+DDD L+GVV++ DL+
Sbjct: 6 DVMTRK--VVTVKKDLTLRELSNLFLEHRVNGFPVVDDDSVLIGVVTEKDLI-------- 55
Query: 137 NQNDTSLFPNVNSTW------KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
QN P V + + ++ + ++ + + G V D+ L V +T++ + A
Sbjct: 56 EQNKNLHIPTVIALFDAVIYLESDEKFEKEVKRFTGTRVEDIFQQNVLTVEPDTDMNEVA 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L+ LPVV+G GKLVG+I + +V++
Sbjct: 116 TLMANHDIHTLPVVEG-GKLVGVIGKVDVIKC 146
>gi|455650949|gb|EMF29703.1| putative CBS domain-containing protein [Streptomyces gancidicus BKS
13-15]
Length = 225
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + AV E ++ + + +++ PV++ + ++VGVVS+ DLL +
Sbjct: 6 HIVSDVMTRT--VVAVGREAPFKEIVQTMEQWKVSAMPVLEGEGRVVGVVSEADLLPKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLS---KTNGKVVGDLMTPAPLVVHENTNLEDA 189
+D SLF E +R LS K +LM+ + VH + L A
Sbjct: 64 F---RDSDPSLF-----------EQRRRLSDVAKAGAVTAEELMSTPAITVHPDATLAQA 109
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AR++ +RLPVVD G L G+++R ++++ L+
Sbjct: 110 ARIMAVRHVKRLPVVDDIGMLQGMVSRADLLKVFLR 145
>gi|336122097|ref|YP_004576872.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856618|gb|AEH07094.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 154
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 78/137 (56%), Gaps = 12/137 (8%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN------- 146
V E ++ + +I+G PVIDDD LVG++S+ D++ +++ + + P+
Sbjct: 20 VREVIKLFRKYKISGAPVIDDDRNLVGIISESDIIK--TLTTHDDRFDIILPSPFDLIEL 77
Query: 147 -VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+ +T K E + + K V D+MT + V +T + +AA ++++ K +RLPV+
Sbjct: 78 PLKTTLK-IEEFREDIEKALKTKVKDVMTKDVITVSPDTPINEAAEIMIKHKIKRLPVIK 136
Query: 206 GYGKLVGLITRGNVVRA 222
G+LVG++TRG+++ A
Sbjct: 137 N-GELVGIVTRGDLIEA 152
>gi|383770464|ref|YP_005449527.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
gi|381358585|dbj|BAL75415.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
Length = 242
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T++ EA ++++ I+G V+DD KLVGVVS+ D + I G +
Sbjct: 13 SVTPDTSIVEAANIMLKRHISGLTVVDDSGKLVGVVSEGDFIRRSEIGTGRK-------- 64
Query: 147 VNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
W F + +G+ V ++MT P+ + E+T L + L+ +RLP
Sbjct: 65 -RGRWLRFILGPGKSASDFVHEHGRKVSEVMTAKPVTITEDTALAEIVDLMERNNVKRLP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKRD 229
VV G K+VG+++R N+++A + R+
Sbjct: 124 VVRG-DKVVGIVSRANLLQAVAGLARE 149
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + + V +T++ +AA ++L+ L VVD GKLVG+++ G+ +R
Sbjct: 6 IMTRSVISVTPDTSIVEAANIMLKRHISGLTVVDDSGKLVGVVSEGDFIR 55
>gi|377811570|ref|YP_005044010.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357940931|gb|AET94487.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 231
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT + +V TT+ E + LV+ I+ PV+D D ++GV+S+ DLL + I G
Sbjct: 5 DVMTSS--VVSVAPETTIHELAKLLVQHHISAAPVVDKDGYVIGVISEGDLLRREEI--G 60
Query: 137 NQNDT---SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ + + + ++ S + + K++ + VG++M+ P+ V E+T+L + A +L
Sbjct: 61 TEKEVRRRAWWLDMLSDGGAADYI-----KSHARTVGEIMSRDPVCVSEDTSLAEIAAVL 115
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV+ G+LVG+++R N+V+A
Sbjct: 116 ESRHIKRVPVLR-EGRLVGIVSRSNLVQA 143
>gi|403739465|ref|ZP_10951846.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
gi|403190668|dbj|GAB78616.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
Length = 201
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
++ ++EAL+ L E+RIT PV+ D K+VGV+S+ D+L ++ P+
Sbjct: 13 SIHAEADLNEALQLLAERRITAVPVVGSDNKVVGVLSEIDILR-----------RAVEPD 61
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ E + L K VG++MT P E ++ D L T ++ LPVV
Sbjct: 62 ARAHATPLAESEPL-----PKTVGEIMTADPRTTTEGADVSDLIDLFTHTSFKSLPVVRD 116
Query: 207 YGKLVGLITRGNVVRAALQIKRD 229
G LVG+++R +VVRA + D
Sbjct: 117 -GDLVGVVSRSDVVRALWRSDED 138
>gi|406662595|ref|ZP_11070687.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
gi|405553460|gb|EKB48685.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
Length = 152
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 24/130 (18%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
++D LE L +++I+G PV+D + +L+G++S+ D L I G ++T FP
Sbjct: 38 SIDHVLEVLTKRKISGAPVVDKEGRLIGIISEVD--CLKEIIKGKYSNTPKFPG------ 89
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
V D MT + + + +L DAA+ L+ K RR PV+ GKL+G
Sbjct: 90 ---------------TVADHMTEDVITLSPDLSLFDAAQKFLDLKIRRFPVLKD-GKLIG 133
Query: 213 LITRGNVVRA 222
I+ +V+RA
Sbjct: 134 QISLSDVIRA 143
>gi|312137438|ref|YP_004004775.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311225157|gb|ADP78013.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 266
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 42/160 (26%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT+K + V T E +E + + + GFPV DD KLVG+V+ +DL+
Sbjct: 7 VKDYMTRK--VICVTPETPTSELVELMKKTQHDGFPVTDD-GKLVGMVTSFDLI------ 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ + K V ++M+ +V EN + DAAR++
Sbjct: 58 ---------------------------TNPSAKKVKEIMSTDVVVTRENMTIHDAARVMF 90
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
RLPVV+G GK+VG+IT +++R+ + ERST
Sbjct: 91 REGVSRLPVVNGEGKVVGIITNTDIIRSHI------ERST 124
>gi|268324812|emb|CBH38400.1| conserved hypothetical protein containing CBS domain pair
[uncultured archaeon]
Length = 154
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLAL-DSISGGNQNDTSLFPNVNSTWKTFNELQ- 158
L E I G PV++D ++VGVVS D+L L D T F ++ +EL+
Sbjct: 29 LKENSIAGVPVVNDRKEVVGVVSVSDILKLLDDFHWY----TPFFSAMDILHLHSDELEN 84
Query: 159 --RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
R + + + V D M+ P + +T ++DAA+++ T + RLPV+DG GKLVG++ R
Sbjct: 85 VKRDIEEVSEMKVKDAMSKNPKTIAPDTLIDDAAQIMYSTGFNRLPVLDGKGKLVGIVAR 144
Query: 217 GNVVRA 222
+++ +
Sbjct: 145 ADIISS 150
>gi|289774120|ref|ZP_06533498.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289704319|gb|EFD71748.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 222
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 26/158 (16%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
+ TVG+ M++ ++ TT E + L RI+G PV+DDD K++GVVS DL+
Sbjct: 3 SRTVGEVMSR--NVVRAARTTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQ 60
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ G + ++ D+M+ + VH + DAAR
Sbjct: 61 AHRAGRRPARAV------------------------TAADVMSSPAITVHPEQTVPDAAR 96
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L+ RLPVVD +L+G+ TR +++R L+ D
Sbjct: 97 LMERRGVERLPVVDEEDRLIGIATRRDLLRVFLRTDDD 134
>gi|386819034|ref|ZP_10106250.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
gi|386424140|gb|EIJ37970.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
Length = 153
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
N V D+MTK +L K ++ E +E ++ RI+G PV D++ LVG++S+ D +
Sbjct: 18 NAPILVEDYMTK--NLVLFKPDQSILEVMELFLKHRISGGPVCDENGHLVGIISEADCMK 75
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
S S + FN +L K V + MT + + N+ DA
Sbjct: 76 QISES-----------------RYFN--MPILDKN----VENFMTRDVETIPHDMNIFDA 112
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
A + RRLPV+D +GKLVG I+R ++V AAL++
Sbjct: 113 ASRFYKGHRRRLPVMD-HGKLVGQISRKDIVVAALKL 148
>gi|163848024|ref|YP_001636068.1| hypothetical protein Caur_2472 [Chloroflexus aurantiacus J-10-fl]
gi|222525911|ref|YP_002570382.1| hypothetical protein Chy400_2666 [Chloroflexus sp. Y-400-fl]
gi|163669313|gb|ABY35679.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222449790|gb|ACM54056.1| CBS domain containing membrane protein [Chloroflexus sp. Y-400-fl]
Length = 435
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D M D+ +V + T+V E + L+E+ + PV+D + +++G+V+D DLL
Sbjct: 120 VADVM--NHDVISVTSETSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLL------ 171
Query: 135 GGNQNDTSLFPNVNSTWKTFNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
Q S P E + D+MTP P + +L AA L
Sbjct: 172 ---QRGVSQLPLHLQQLLPGAERAAHLAAVAARPERAADVMTPNPTTIPATASLTQAALL 228
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ E ++RLPVVD G+LVG+++R ++++
Sbjct: 229 MTEHDHKRLPVVDEAGRLVGMLSRSDLLQ 257
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--ALD 131
TVG+ M + D+ V T + E L+R++ V+D + ++VG++SD D+L A
Sbjct: 280 TVGEVMIR--DVPTVTPETPLAETLDRILSTPRRRVVVVDQNRRVVGIISDGDILRRAAR 337
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
++ G +++ + EL+ L V MT L V+ +T + A
Sbjct: 338 PVAPGLLQRFAVWIGGGARPP---ELELALKNLTAAAV---MTSPVLTVNPDTPIISAVE 391
Query: 192 LLLETKYRRLPVVDGYGKLVGLI 214
L++E + +RLPVVD G+LVG++
Sbjct: 392 LMIERRIKRLPVVDEEGRLVGMV 414
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+ T ++ +A + E PV+D+ +LVG++S DLL V
Sbjct: 216 IPATASLTQAALLMTEHDHKRLPVVDEAGRLVGMLSRSDLLQ----------------TV 259
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+T+ + +E+ T K VG++M V T L + +L T RR+ VVD
Sbjct: 260 ANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAETLDRILSTPRRRVVVVDQN 319
Query: 208 GKLVGLITRGNVVRAA 223
++VG+I+ G+++R A
Sbjct: 320 RRVVGIISDGDILRRA 335
>gi|376295146|ref|YP_005166376.1| hypothetical protein DND132_0355 [Desulfovibrio desulfuricans
ND132]
gi|323457707|gb|EGB13572.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 149
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 21/158 (13%)
Query: 79 MTKKEDLHAVKTTTTVDE-----ALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
M K +D+ + T E A + L+EK+I G PV+D D ++VGV+ DL+A
Sbjct: 1 MLKAKDIMTTECITLTPETDITAAAKVLLEKKINGAPVLDGD-QVVGVLCQSDLVA---- 55
Query: 134 SGGNQNDTSLFPNVNSTW------KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
Q P+ + + +EL R ++K VGD MT AP V T +E
Sbjct: 56 ----QQKKVTLPSFFTLLDGVIPLSSHDELDREMTKIAALKVGDAMTAAPTFVTPETTIE 111
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
D A ++ K LPV++ GKLVG++ + +V++ ++
Sbjct: 112 DVATMMANEKLYTLPVIEN-GKLVGVVGKEDVLKTLIK 148
>gi|384532132|ref|YP_005717736.1| putative signal transduction protein [Sinorhizobium meliloti
BL225C]
gi|384541151|ref|YP_005725234.1| hypothetical protein SM11_pC1352 [Sinorhizobium meliloti SM11]
gi|333814308|gb|AEG06976.1| putative signal transduction protein with CBS domains
[Sinorhizobium meliloti BL225C]
gi|336036494|gb|AEH82425.1| conserved hypothetical protein [Sinorhizobium meliloti SM11]
Length = 223
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT K + + +V +A + + + ++G PV+DDD +L+GV+S+ DL+ +
Sbjct: 3 VKDVMTTK--VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTELC 60
Query: 135 GGN---QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G D ++ P+ + N R S VGD+MT P+ + E L A
Sbjct: 61 SGASVLMADMAIDPDDRA-----NAFIRRCSWR----VGDVMTANPVTIEEEAPLARVAG 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L+ E +R+PV+ G+LVG+++R ++++A K D
Sbjct: 112 LMQERGIKRIPVMRD-GELVGIVSRADLLQAIFSTKPD 148
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT + + + ++ AA+L+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|221635717|ref|YP_002523593.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
gi|221158173|gb|ACM07291.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
Length = 462
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
N T D MT D V T+++ +++++I PV+D D +L+G++ + D LA
Sbjct: 301 NETLRARDIMTP--DPVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLA 358
Query: 130 LDS-ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ I LF + W ++R+ ++ GD+ + V E+T L
Sbjct: 359 QEKPIPFAAFRAPQLFGH----WLNAEGIERIYAEARTMKAGDVAQAPAVTVTEDTPLSR 414
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A+L++E R +PVV GKLVG++TR +V++A
Sbjct: 415 IAQLMVERDVRHIPVVRD-GKLVGIVTRHDVLKA 447
>gi|443318846|ref|ZP_21048089.1| chloride channel protein EriC [Leptolyngbya sp. PCC 6406]
gi|442781584|gb|ELR91681.1| chloride channel protein EriC [Leptolyngbya sp. PCC 6406]
Length = 868
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 73/171 (42%), Gaps = 37/171 (21%)
Query: 55 FAHNGVGITNSVPPRNGTY---TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPV 111
A G+ + N P N + T D M ++ + + T ++ EAL+ GFPV
Sbjct: 424 LAFKGIHL-NPAPSENNPWAHLTAADLMQRR--VETLTATMSIPEALDAFARSHHRGFPV 480
Query: 112 IDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGD 171
+ KLVG+V+ Q D + P ++T V D
Sbjct: 481 LTQG-KLVGIVT--------------QTDLAEVPQ---------------TRTAAYTVAD 510
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
MTP P+ V L LL K RLPV DG KLVG+ITRG+++RA
Sbjct: 511 FMTPRPVTVAPEAPLPQVLYLLNRLKVSRLPVTDG-SKLVGIITRGDIIRA 560
>gi|424887384|ref|ZP_18310989.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393175156|gb|EJC75199.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 225
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT K + ++ +V A+ +++ R++G PV+DD ++ G+V++ DLL
Sbjct: 5 DIMTTK--VVSISPAVSVRHAVAMMLQNRVSGLPVVDDQGRVCGMVTEGDLLL------- 55
Query: 137 NQNDTSLFPNVNSTWKTFNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ + L P + +E L+R + +NG V D+M+ +V ++ + D A L
Sbjct: 56 -RREVRLTPRPARAPELISEIDLERYIC-SNGWCVTDVMSQDVIVARPDSEVSDIAESLQ 113
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ +RLP+V+ G+LVG+++R +++R
Sbjct: 114 AHRIKRLPIVED-GRLVGIVSRRDILR 139
>gi|387816426|ref|YP_005676770.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
gi|322804467|emb|CBZ02017.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
Length = 138
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 34/155 (21%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT +++ V +V++A + + E + P+ D++ K+VGV++D D+ AL S++ G
Sbjct: 5 DVMT--QNVATVNRNDSVEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVAKG 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ N+ VGD+MT P+V +++ ++ DAAR++ E
Sbjct: 61 SDNNIK--------------------------VGDIMTSNPVVANKDMDIHDAARIMSER 94
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ RRLPV D +VG+++ G++ A++ K + E
Sbjct: 95 QIRRLPVEDNQN-IVGIVSLGDI---AIEPKHENE 125
>gi|313676663|ref|YP_004054659.1| cbs domain containing protein [Marivirga tractuosa DSM 4126]
gi|312943361|gb|ADR22551.1| CBS domain containing protein [Marivirga tractuosa DSM 4126]
Length = 156
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 26/149 (17%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V D+M +L T+ EA++ L++K+I+G PV+D++ L+GV+S+ D L I
Sbjct: 23 SVKDYMAT--NLITFNEHQTIYEAMDILMKKKISGGPVVDENNNLIGVISEGD--CLKEI 78
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G N++ P +V D M + + TN+ +AA +
Sbjct: 79 VKGKYNNSPKLPG---------------------LVKDYMATNVIHIDPETNIFEAANMF 117
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L ++RR PV+ GKL+G I++ +++RA
Sbjct: 118 LRMRFRRFPVLKE-GKLIGQISQRDIMRA 145
>gi|297617214|ref|YP_003702373.1| signal transduction protein with CBS domains [Syntrophothermus
lipocalidus DSM 12680]
gi|297145051|gb|ADI01808.1| putative signal transduction protein with CBS domains
[Syntrophothermus lipocalidus DSM 12680]
Length = 153
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT +D+ V T +V + +E+ IT V+D+D K+ G+V+D D+LA
Sbjct: 6 DIMT--QDVKVVNTDDSVGGVIRCFLEEGITSAVVVDNDNKVKGIVTDGDILA------A 57
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNG---KVVGDLMTPAPLVVHENTNLEDAARLL 193
+ + +V S + + + ++KT+ K V ++MT + V E+T++ + ARL+
Sbjct: 58 VRQRRPVVVDVMSYFWAVGDDEDFVAKTDAVKQKKVKEIMTKHVVTVTEDTSIPEIARLM 117
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+E +++PVV G++VGLI R ++V+A +
Sbjct: 118 VENGIKQIPVVQS-GRIVGLIRRKDIVKAVAE 148
>gi|117927799|ref|YP_872350.1| signal-transduction protein [Acidothermus cellulolyticus 11B]
gi|117648262|gb|ABK52364.1| putative signal-transduction protein with CBS domains [Acidothermus
cellulolyticus 11B]
Length = 155
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 35/139 (25%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
K ++ V T V + LV+ RI+ PV+D +VG+VS++DL+
Sbjct: 8 KAPVYTVDVDTPVADIAHLLVQHRISAVPVVDASGAVVGLVSEHDLI------------- 54
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
S+T GKV D+M+ + V E+T +ED LLL+ + RR+
Sbjct: 55 --------------------SRT-GKVAADIMSTGVISVTEDTEVEDVRHLLLDRRIRRV 93
Query: 202 PVVDGYGKLVGLITRGNVV 220
PVV G G+L+G+++R ++V
Sbjct: 94 PVVSG-GQLIGIVSRADLV 111
>gi|298241060|ref|ZP_06964867.1| putative signal transduction protein with CBS domains
[Ktedonobacter racemifer DSM 44963]
gi|297554114|gb|EFH87978.1| putative signal transduction protein with CBS domains
[Ktedonobacter racemifer DSM 44963]
Length = 155
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 37/148 (25%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V + MT+ D+ V T+ +A L E +I+G PV++ D +VG+V+++D++A
Sbjct: 3 VRNVMTR--DVIVVNEDQTMQQAAHLLSEYKISGMPVVNSDNVIVGIVTEFDVIA----- 55
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G++V D+MT + + V E T LE+ +R+L+
Sbjct: 56 -----------------------------RKGQLVRDIMTRSVITVSEETELEEVSRILV 86
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RRL VV G+LVG+I+R ++V+A
Sbjct: 87 HERIRRLLVV-SRGRLVGIISRVDLVKA 113
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
V ++MT +VV+E+ ++ AA LL E K +PVV+ +VG++T +V+ Q+ R
Sbjct: 3 VRNVMTRDVIVVNEDQTMQQAAHLLSEYKISGMPVVNSDNVIVGIVTEFDVIARKGQLVR 62
Query: 229 D 229
D
Sbjct: 63 D 63
>gi|448509403|ref|ZP_21615700.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|448525289|ref|ZP_21619605.1| peptidase M50 [Halorubrum distributum JCM 10118]
gi|445696652|gb|ELZ48736.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|445699831|gb|ELZ51850.1| peptidase M50 [Halorubrum distributum JCM 10118]
Length = 394
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT ++DLH V T+V + + R+ E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + + + DL+ P N + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G+LVGLI+R +++ A I+ G
Sbjct: 339 QEHGVGRLPVVDADGELVGLISRSDLMTAFNIIQTGG 375
>gi|357633591|ref|ZP_09131469.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357582145|gb|EHJ47478.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 218
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VGD+M+ D+ V ++ +A + EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMST--DVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS--- 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T + E+ LLS+ K+ G LMT P+ + + +E AA ++
Sbjct: 58 ----------PSSATTLDMY-EMTYLLSEL--KIKG-LMTRNPVSIRRSDTVERAALIMR 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K+ LPV+D GK+VG+IT ++ R + I
Sbjct: 104 DRKFGSLPVIDEAGKVVGIITDTDIFRLFVSI 135
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+VGD M+ V E+ ++ A R++ E K RRLPVVD G+LVG+++ ++ A+
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS 57
>gi|302540279|ref|ZP_07292621.1| CBS domain-containing protein [Streptomyces hygroscopicus ATCC
53653]
gi|302457897|gb|EFL20990.1| CBS domain-containing protein [Streptomyces himastatinicus ATCC
53653]
Length = 221
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 17/153 (11%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + AV E + L + +++ PV+ + +++GVVS+ DLL +
Sbjct: 8 VSDVMTHT--VVAVGREAPFKEIVRTLEQWKVSALPVLAGEGRVIGVVSEADLLPKEEFR 65
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
NS +L+ L ++K +LMT + VH N L +AAR+
Sbjct: 66 -------------NSDPDRLAQLRDLPGIAKAGAVSADELMTSPAITVHANATLAEAARI 112
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + +RLPVVD G+L G+++R ++++ L+
Sbjct: 113 MTHKRVKRLPVVDDEGRLEGIVSRADLLKVFLR 145
>gi|383764645|ref|YP_005443627.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384913|dbj|BAM01730.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 209
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 17/140 (12%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T EAL+ + +++ PV+D K+VG+VS+ DLL TSL S W
Sbjct: 12 TPFQEALKLMRDRKFRRLPVVDATGKIVGIVSERDLL-----HAAPSPATSL-----SVW 61
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
E+ LL K V D+MT + +++N +EDAA L++ K LPVVD G +V
Sbjct: 62 ----EVNYLLWKLK---VSDIMTRNVVTINQNMPIEDAASLMVTRKIGGLPVVDDGGAIV 114
Query: 212 GLITRGNVVRAALQIKRDGE 231
G+IT ++ +A +++ GE
Sbjct: 115 GVITETDIFKAFVEMLGGGE 134
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
MT + + +T ++A +L+ + K+RRLPVVD GK+VG+++ +++ AA
Sbjct: 1 MTSPAVTISPDTPFQEALKLMRDRKFRRLPVVDATGKIVGIVSERDLLHAA 51
>gi|239906344|ref|YP_002953085.1| hypothetical protein DMR_17080 [Desulfovibrio magneticus RS-1]
gi|239796210|dbj|BAH75199.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 412
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ +V T + E ++ LV + + PV+D K++GVV+ DLL GG SL
Sbjct: 119 DVASVGPDTDLGEVVDLLVARHVKAVPVVDAGRKVLGVVTGGDLLT----RGGLSARLSL 174
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
F + + + + +G V ++MT + E T+L +A+ +++ +RLPV
Sbjct: 175 FGLLPADAREEAA-----AALSGHTVKEVMTAPAETIGERTSLREASERMVKKGLKRLPV 229
Query: 204 VDGYGKLVGLITRGNVVRAALQI 226
VD G+L+G+++R +++RAA ++
Sbjct: 230 VDEAGELIGIVSRTDILRAAAKV 252
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+TV + MT + + T++ EA ER+V+K + PV+D+ +L+G+VS D+L
Sbjct: 193 HTVKEVMTAPAE--TIGERTSLREASERMVKKGLKRLPVVDEAGELIGIVSRTDIL---- 246
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ P V +T L+ + ++ D+ T P + +L D A
Sbjct: 247 ------RAAAKVP-VGATEAMPRFTAGLMQQARDVLITDVPTARP-----DESLLDVASR 294
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
L+ + RR+ V+D GK+ G++ G+++ KR G
Sbjct: 295 LVASPLRRVVVLDAAGKVAGIVHDGDLLARCGPSKRPG 332
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 33/183 (18%)
Query: 52 VKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEAL----ERLVEKRIT 107
++A A VG T ++P +T G ++ L T DE+L RLV +
Sbjct: 246 LRAAAKVPVGATEAMP----RFTAGLMQQARDVLITDVPTARPDESLLDVASRLVASPLR 301
Query: 108 GFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGK 167
V+D K+ G+V D DLLA + S P + LQ L K + +
Sbjct: 302 RVVVLDAAGKVAGIVHDGDLLA--------RCGPSKRPGI---------LQALFGKKDDE 344
Query: 168 VVG--------DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNV 219
G + M V E+ L D + ++ +RL V D GKL G++ R V
Sbjct: 345 AAGVCPVGTAGEAMQTTVYSVAEDAALTDVLQKMIVHGVKRLVVTDDDGKLRGMVDREAV 404
Query: 220 VRA 222
+RA
Sbjct: 405 LRA 407
>gi|126701088|ref|YP_001089985.1| hypothetical protein CD630_34650 [Clostridium difficile 630]
gi|254977089|ref|ZP_05273561.1| hypothetical protein CdifQC_17333 [Clostridium difficile QCD-66c26]
gi|255094417|ref|ZP_05323895.1| hypothetical protein CdifC_17436 [Clostridium difficile CIP 107932]
gi|255102674|ref|ZP_05331651.1| hypothetical protein CdifQCD-6_17826 [Clostridium difficile
QCD-63q42]
gi|255308495|ref|ZP_05352666.1| hypothetical protein CdifA_18036 [Clostridium difficile ATCC 43255]
gi|255316169|ref|ZP_05357752.1| hypothetical protein CdifQCD-7_17524 [Clostridium difficile
QCD-76w55]
gi|255518830|ref|ZP_05386506.1| hypothetical protein CdifQCD-_17063 [Clostridium difficile
QCD-97b34]
gi|255652009|ref|ZP_05398911.1| hypothetical protein CdifQCD_17625 [Clostridium difficile
QCD-37x79]
gi|255657419|ref|ZP_05402828.1| hypothetical protein CdifQCD-2_17366 [Clostridium difficile
QCD-23m63]
gi|260684984|ref|YP_003216269.1| hypothetical protein CD196_3255 [Clostridium difficile CD196]
gi|260688642|ref|YP_003219776.1| hypothetical protein CDR20291_3301 [Clostridium difficile R20291]
gi|296449015|ref|ZP_06890805.1| CBS domain protein [Clostridium difficile NAP08]
gi|296879838|ref|ZP_06903811.1| CBS domain protein [Clostridium difficile NAP07]
gi|306521751|ref|ZP_07408098.1| hypothetical protein CdifQ_19995 [Clostridium difficile QCD-32g58]
gi|384362658|ref|YP_006200510.1| hypothetical protein CDBI1_16945 [Clostridium difficile BI1]
gi|423080793|ref|ZP_17069410.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|423087194|ref|ZP_17075583.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|423090563|ref|ZP_17078852.1| CBS domain protein [Clostridium difficile 70-100-2010]
gi|115252525|emb|CAJ70368.1| conserved hypothetical protein [Clostridium difficile 630]
gi|260211147|emb|CBA66586.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214659|emb|CBE07281.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|296262108|gb|EFH08913.1| CBS domain protein [Clostridium difficile NAP08]
gi|296429127|gb|EFH15001.1| CBS domain protein [Clostridium difficile NAP07]
gi|357545132|gb|EHJ27112.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|357552282|gb|EHJ34056.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|357556267|gb|EHJ37882.1| CBS domain protein [Clostridium difficile 70-100-2010]
Length = 153
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 77/142 (54%), Gaps = 8/142 (5%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ K ++ + L+ ++I G PV+D + ++VG++S+ D+L + + L
Sbjct: 13 DVIVAKQDDSIADVANMLIAEKIGGLPVVDSENRVVGIISETDILKKEKYI-----EAPL 67
Query: 144 FPNVNSTWKTFNELQRL---LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
+ N+ ++L+++ + + VG+LM+ + VHE+ +D A ++++ R
Sbjct: 68 YINLLQGLIFLDDLKKVEKDIKQVAAYKVGELMSKDIIKVHEDDKFDDVANVMIKKSINR 127
Query: 201 LPVVDGYGKLVGLITRGNVVRA 222
+PVVD KL G+I R ++++A
Sbjct: 128 VPVVDDDNKLKGIICRYDIIKA 149
>gi|357030115|ref|ZP_09092079.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
gi|355533090|gb|EHH02430.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
Length = 232
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ T ++ +A ++ ++++G PVI D LVGVVS+ D L + G +N + +
Sbjct: 14 IEPTASISDAAGLMLSRKVSGLPVICSDGTLVGVVSEGDFLRRVEL-GTKRNRSRWLEFL 72
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
S + +E K NG+ + ++MT + V +L + L+ +R+PVVD
Sbjct: 73 VSPGRAADE----YVKANGRRIEEVMTAEVITVPPAASLPEIVELMARHHVKRVPVVDS- 127
Query: 208 GKLVGLITRGNVVRAALQIKRDG 230
GK+VG+ITR +++RA L + D
Sbjct: 128 GKVVGIITRSDLLRALLSVLPDA 150
>gi|317153451|ref|YP_004121499.1| hypothetical protein Daes_1741 [Desulfovibrio aespoeensis Aspo-2]
gi|316943702|gb|ADU62753.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 150
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 18/157 (11%)
Query: 79 MTKKEDLHAVKTTTT-----VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
M K +D+ K T + A L+E +I G PVID+ +VGV+ DL+A
Sbjct: 1 MLKAKDIMTAKCITLTPDTDIATAARVLLENKINGAPVIDEKGTVVGVLCQADLVA---- 56
Query: 134 SGGNQNDTSL---FPNVNSTW--KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
Q +L F ++ + + +EL+R ++K V + MT AP V+ +T ++D
Sbjct: 57 ---QQKKITLPSFFTLLDGVFPLSSHDELEREITKIAALKVAEAMTAAPTVIAPDTGIDD 113
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
A ++ K LPV+D G+LVG++ + +V++ L+
Sbjct: 114 IATMMANKKLYTLPVLDN-GRLVGVVGKEDVLKTLLK 149
>gi|332878101|ref|ZP_08445831.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|357047655|ref|ZP_09109253.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella clara YIT
11840]
gi|332684063|gb|EGJ56930.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|355529343|gb|EHG98777.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella clara YIT
11840]
Length = 492
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+K TV +AL + E I G PV+DD+ KLVG+V++ DL QN P+
Sbjct: 105 IKRGRTVGDALNMMSEYHIGGIPVVDDENKLVGIVTNRDLRF-------EQN-----PD- 151
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
+ + ++MT LV H+ T+L AA++L E K +LPVVD
Sbjct: 152 -------------------RKIDEVMTSENLVTTHQQTDLSAAAKILQENKIEKLPVVDK 192
Query: 207 YGKLVGLITRGNVVRA 222
G+LVGLIT ++ +A
Sbjct: 193 DGRLVGLITYKDITKA 208
>gi|75675216|ref|YP_317637.1| hypothetical protein Nwi_1023 [Nitrobacter winogradskyi Nb-255]
gi|74420086|gb|ABA04285.1| IMP dehydrogenase [Nitrobacter winogradskyi Nb-255]
Length = 243
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 9/153 (5%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN 137
MT K L VK T + EA + ++E I+G PV+DD +L+G+VS+ D + I G +
Sbjct: 6 IMTHK--LITVKADTPIVEAAKLMLESHISGLPVVDDAGRLLGIVSESDFMRRSEI-GTH 62
Query: 138 QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVH-ENTNLEDAARLLLET 196
+ T K + R +G+ V +MT L E+ LE+ RL+
Sbjct: 63 GPRIRWLDFLMGTEKAAIDFVR----EHGRKVSAIMTRETLFTATEDMPLEELVRLMERQ 118
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+RLPV+ G LVG++TR +++RA + RD
Sbjct: 119 NIKRLPVIRG-DLLVGIVTRADLLRAVASLARD 150
>gi|330996062|ref|ZP_08319956.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella xylaniphila
YIT 11841]
gi|329574059|gb|EGG55637.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella xylaniphila
YIT 11841]
Length = 492
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+K TV +AL + E I G PV+DD+ KLVG+V++ DL QN P+
Sbjct: 105 IKRGRTVGDALNMMSEYHIGGIPVVDDENKLVGIVTNRDLRF-------EQN-----PD- 151
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
+ + ++MT LV H+ T+L AA++L E K +LPVVD
Sbjct: 152 -------------------RKIDEVMTSENLVTTHQQTDLSAAAKILQENKIEKLPVVDK 192
Query: 207 YGKLVGLITRGNVVRA 222
G+LVGLIT ++ +A
Sbjct: 193 DGRLVGLITYKDITKA 208
>gi|408534327|emb|CCK32501.1| CBS domain-containing protein [Streptomyces davawensis JCM 4913]
Length = 223
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ D+ V+ + + L +++++ V+D +++GVVS+ DLL +
Sbjct: 6 HVVSDVMTR--DVAVVRRDAAFKDVVRTLHDRKVSALVVVDGGRRVLGVVSEADLLPKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+S + +L+RL L+K G+LMT L V T L AA
Sbjct: 64 FR-------------DSDPDRYTQLRRLSDLAKAGSVTAGELMTSPALTVRAETTLAQAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
R++ + +RLPVV +L G+++R ++++ L+
Sbjct: 111 RIMARARVKRLPVVGDTDRLEGVVSRSDLLKVFLR 145
>gi|427418510|ref|ZP_18908693.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425761223|gb|EKV02076.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 164
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 2/133 (1%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
++ +A++ L RI+G PV+D + VG +S+ DL+ +SG + + +
Sbjct: 31 SLKDAIQLLATHRISGLPVVDATGEAVGEISETDLMW--QVSGASLPAYVMLLDSIVYLT 88
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
+ L K G+ V D+M+ VV + +L+ AA+L+ + + RRL VVD ++G
Sbjct: 89 NPARYSQELHKALGQTVADVMSRKVTVVQADDDLQRAAQLMHDKQIRRLVVVDDDRHVIG 148
Query: 213 LITRGNVVRAALQ 225
++TRG++VR Q
Sbjct: 149 ILTRGDIVRELAQ 161
>gi|258649204|ref|ZP_05736673.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
51259]
gi|260850469|gb|EEX70338.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
51259]
Length = 493
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 33/132 (25%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
+TV AL+ + E I G PV+DDD LVG+V++ DL
Sbjct: 110 STVRGALQLMHEYHIGGIPVVDDDMHLVGIVTNRDL------------------------ 145
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVH-ENTNLEDAARLLLETKYRRLPVVDGYGKL 210
R + KV D+MT LV + T+L+ AAR+L E K +LPV+D GKL
Sbjct: 146 -------RFEHNLDQKVE-DVMTKEHLVTTTQQTDLQGAARILKENKIEKLPVIDKDGKL 197
Query: 211 VGLITRGNVVRA 222
VGLIT ++ +A
Sbjct: 198 VGLITYKDITKA 209
>gi|398356242|ref|YP_006529569.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
gi|399995456|ref|YP_006575694.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|365182303|emb|CCE99153.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|390131489|gb|AFL54869.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
Length = 218
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MTKK + +V ++ A ++E RI+G PV DDD KLVG++S+ DLL +
Sbjct: 5 DIMTKK--VLSVSPEHSISHAALTMLENRISGLPVCDDDRKLVGILSEGDLLRRAELG-- 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
++ +P S + E + +KT+ VGD+MT + V E+ L ++
Sbjct: 61 ----SAAWP---SAIRDKAEPE-AFTKTHSWRVGDVMTQRVVTVDEDAPLGRIGAIMAAN 112
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +R+PV+ ++VG+I+R +++RA
Sbjct: 113 QIKRIPVMRAE-EMVGIISRSDILRA 137
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+MT L V ++ AA +LE + LPV D KLVG+++ G+++R A
Sbjct: 5 DIMTKKVLSVSPEHSISHAALTMLENRISGLPVCDDDRKLVGILSEGDLLRRA 57
>gi|254380661|ref|ZP_04996027.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339572|gb|EDX20538.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 216
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
AV T E + + ++T PV++ + ++VGVVS+ DLL + +++ + +
Sbjct: 7 AVTPTAEFKEIVTAIERWKVTALPVVEGEGRVVGVVSEADLLPKEEF---HEHRPGMIEH 63
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ T SK DLMT + VH + L ARL+ E +RLPVVD
Sbjct: 64 MRRLADT--------SKAGSTCAEDLMTTPAVTVHPSATLPQVARLMAERHIKRLPVVDA 115
Query: 207 YGKLVGLITRGNVVRAALQ 225
G L G+++R ++++ L+
Sbjct: 116 DGTLKGIVSRADLLKVFLR 134
>gi|413962370|ref|ZP_11401598.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413931242|gb|EKS70529.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 228
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
+V +A +V I+G PVID++ L+G+V++ DL+ I G + V ST
Sbjct: 21 SVRQAAGTMVFAGISGMPVIDEEGNLLGIVTEGDLMHRAEIGTGVKQRAWWLELVAST-- 78
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
EL K + + V D+MT V E + D A LL + +R+PV+ GK+VG
Sbjct: 79 --RELASQYVKEHARKVSDVMTTDVATVSETCPVADIAELLERKRIKRVPVLRD-GKVVG 135
Query: 213 LITRGNVVRA 222
+++R N++RA
Sbjct: 136 VVSRANLIRA 145
>gi|325959812|ref|YP_004291278.1| major facilitator superfamily protein [Methanobacterium sp. AL-21]
gi|325331244|gb|ADZ10306.1| major facilitator superfamily MFS_1 [Methanobacterium sp. AL-21]
Length = 559
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 7/153 (4%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P T V DFM +L +VK +T+ E L+ + RI G PV+D L+G+VSD D+
Sbjct: 402 PEKRTLIVKDFMV--SNLISVKLDSTILELLKLFTKYRIGGAPVLDSQKNLIGMVSDGDI 459
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNL 186
+ + G+ +D F NE Q +L++ V D+M + V E
Sbjct: 460 IRYLAPKEGSVHD---FIYEVLVEDEENE-QDVLNERINATVEDVMEKKQIYTVKEEDTF 515
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNV 219
E A R+L +++LPV+D K++G+I+RG++
Sbjct: 516 ERAIRILSHHHFKKLPVLDSNNKVIGIISRGDI 548
>gi|374991854|ref|YP_004967349.1| hypothetical protein SBI_09100 [Streptomyces bingchenggensis BCW-1]
gi|297162506|gb|ADI12218.1| hypothetical protein SBI_09100 [Streptomyces bingchenggensis BCW-1]
Length = 222
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
++ V D MT + AV E ++ L + +++ PV++ + +++GVVS+ DLL +
Sbjct: 5 SHIVSDVMTHT--VVAVGREAPFKEIVKTLEQWKVSALPVLEGEGRVIGVVSEADLLPKE 62
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+S +L+ L + K +LMT + VH N L +
Sbjct: 63 EFR-------------DSDPIRLGQLRDLPDIVKAGAVTADELMTSPAITVHANATLAET 109
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
AR++ + +RLPVVD G+L G+++R ++++ L+ D E
Sbjct: 110 ARIMTHRRVKRLPVVDDEGRLEGIVSRADLLKVFLRADEDIE 151
>gi|329938565|ref|ZP_08287990.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
gi|329302538|gb|EGG46429.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
Length = 219
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
G +TV D MT AV + + + E +++ PV++ + ++VGVVS+ DLL
Sbjct: 2 RGPHTVSDVMTHTA--VAVGRDAPFKDIVTLMQEWKVSALPVLEGEGRVVGVVSEADLLL 59
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLE 187
+ + + +L+RL L+K D+MT + VH L
Sbjct: 60 KEEFRDSDPD-------------RLTQLRRLPDLAKAGALTAADVMTAPAVTVHPGATLG 106
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+AAR++ + +RLPVV+ G L G+++R ++++ L+
Sbjct: 107 EAARIMARRRVKRLPVVNAEGILEGVVSRADLLKVFLR 144
>gi|440699101|ref|ZP_20881406.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278407|gb|ELP66445.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 236
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+TVGD MT +++ T + + L RI+G PV+D D K++GVVS DL+ +
Sbjct: 4 HTVGDVMT--DEVVQAHRETPFKDVVRLLDAHRISGLPVVDHDDKVIGVVSGTDLVRGQA 61
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
G + D L + G+LM+ + VH + DAAR+
Sbjct: 62 ARSGGRRDRRYRLPRLRRPGRRAAPGALATTA-----GELMSTPAITVHPEQPVPDAARV 116
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
+ RLPVVD +L+G+ TR +++R L+ D R
Sbjct: 117 MERHGIERLPVVDEEDRLIGIATRRDLLRVFLRTDEDIRRQ 157
>gi|395645474|ref|ZP_10433334.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
gi|395442214|gb|EJG06971.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
Length = 283
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 36/153 (23%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MTK D+ +V+ + D+ L+ L I+G PV + K+VGVV+ DLL
Sbjct: 3 VQDYMTK--DVVSVEIPSNRDDILKILKRTGISGIPV-RERGKVVGVVTRKDLL------ 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
K+ V LM+P P+VV +T L DAA +++
Sbjct: 54 ---------------------------RKSEETQVALLMSPKPVVVTPDTPLSDAAAVMV 86
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
YRRLPVVD G LVGL++ +++ A Q++
Sbjct: 87 RHNYRRLPVVDDNGSLVGLLSVADLIAAIAQLR 119
>gi|398780622|ref|ZP_10544951.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
gi|396998087|gb|EJJ09021.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
Length = 224
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVG MT+ + V+ T E ++ L E +T PV+D + +GVVS+ DLL S
Sbjct: 5 TVGVLMTR--GVVQVRPQTPFKEIVKTLTENDVTAVPVVDATGRPMGVVSEADLLR-KSA 61
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ + + P++ + W+ +K G +LM+ + + +AARL+
Sbjct: 62 GHADPSGRTPIPHLEA-WER--------AKAEGARAEELMSAPAVCARAEWTVVEAARLM 112
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+RLPVVD KLVG+++RG+++R L+
Sbjct: 113 EVQNVKRLPVVDEADKLVGIVSRGDLLRVFLR 144
>gi|295106203|emb|CBL03746.1| CBS-domain-containing membrane protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 161
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 16/154 (10%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL--- 130
T+GD M + D++ + + E + E +G VID+D +VG +SD D++
Sbjct: 4 TIGDIMER--DVYTCRYDQNLGEIVALFNELGTSGLAVIDEDRHVVGFISDGDIMKAVAA 61
Query: 131 ---DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
SI GG + L+ N ++F E R L N V +L L V + ++
Sbjct: 62 QKTRSIFGGGYANMVLYDN-----ESFEEKARALKHRN---VMELAVQKVLCVTADQSIG 113
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ A +L + K++++PV+D G+LVG++ R + R
Sbjct: 114 EIADVLAKKKFKKVPVIDEDGRLVGVVRRATITR 147
>gi|320162383|ref|YP_004175608.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
gi|319996237|dbj|BAJ65008.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
Length = 218
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 78 FMTKKEDLHAVKTTTT---VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ K+ H V T T V EAL R+ + ++ +PV+D KL+G+V+D DL+ +
Sbjct: 1 MLVKERMSHPVLTITPDVPVQEALARMRQDKVRRYPVVDKKGKLIGIVTDSDLM-----N 55
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
T+L S W E+ LLS+ V +MT P+ V E+T +E+AAR++
Sbjct: 56 ASPSEATTL-----SVW----EINYLLSRIT---VERVMTREPITVTEDTTVEEAARIMA 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPV+ +LVG+IT ++ + L++
Sbjct: 104 DNKIGGLPVLRD-NRLVGIITETDLFKIFLEM 134
>gi|374636727|ref|ZP_09708281.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
gi|373558019|gb|EHP84386.1| putative signal transduction protein with CBS domains
[Methanotorris formicicus Mc-S-70]
Length = 153
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 13/128 (10%)
Query: 103 EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN--------VNSTWKTF 154
E +I+G PV++D +LVG++S+ D++ +I+ N++ + P+ + +T K
Sbjct: 29 EHKISGAPVVED-GELVGIISESDIVK--TITTHNESIGLILPSPLDLIELPLRTTLK-I 84
Query: 155 NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
E + + K V D+MT +V+ + + +AA+L++E +RLPVV GKLVG++
Sbjct: 85 EEFKEDIKKALKTKVKDVMTRDVIVISPDEGINNAAKLMIENNIKRLPVVKD-GKLVGIV 143
Query: 215 TRGNVVRA 222
TRG+++ A
Sbjct: 144 TRGDIIEA 151
>gi|46199411|ref|YP_005078.1| hypothetical protein TTC1109 [Thermus thermophilus HB27]
gi|55981442|ref|YP_144739.1| hypothetical protein TTHA1473 [Thermus thermophilus HB8]
gi|46197036|gb|AAS81451.1| conserved hypothetical protein [Thermus thermophilus HB27]
gi|55772855|dbj|BAD71296.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 150
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA-LDSI 133
V D MT+ D + T++EA R++E R GFPV+D + +L+GVV +LL +++
Sbjct: 3 VKDLMTQ--DPVVLGPEATLEEAARRILETRYGGFPVVDGEGRLLGVVQVEELLPHPENV 60
Query: 134 SGGNQNDTSLFPNVNSTW---KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ LF W E+ R +T K V P VH L A
Sbjct: 61 PFSDVEALQLF----GEWVDEDALAEIYRRYQRTPVKAVMRTEIPK---VHPEDPLGKAL 113
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+++L T R LPVVD GK+VG++TR + ++ L
Sbjct: 114 KVVLTTDLRHLPVVDEEGKVVGILTRSDFLKLIL 147
>gi|330806493|ref|XP_003291203.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
gi|325078625|gb|EGC32266.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
Length = 147
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-LALDSI 133
V MT K L+ + +T+D AL+ L I PV+D+D L G+V+D DL LA DS
Sbjct: 5 VRQLMTSKC-LYTISMDSTLDVALKSLNANSIHRLPVVDNDGNLKGIVTDRDLRLATDS- 62
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ F + + K V +M P+ + + + + DAA+L+
Sbjct: 63 ----------------PFIQFETNEERMEKLKQHKVSSIMKQNPVTIEDYSPVVDAAKLM 106
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ LPVVD GKL+G++TR +++ ++I
Sbjct: 107 RVSNVGGLPVVDKNGKLIGMVTRSDLLDCLIKI 139
>gi|322418648|ref|YP_004197871.1| hypothetical protein GM18_1120 [Geobacter sp. M18]
gi|320125035|gb|ADW12595.1| CBS domain containing membrane protein [Geobacter sp. M18]
Length = 149
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 78 FMTKKE----DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
M KE D+ V+ TTV + + E+RI+ PV+DD+ LVG+VS+ DL+
Sbjct: 1 MMKAKEIMTTDVITVRRDTTVRDLAKLFAERRISSVPVVDDEGLLVGIVSESDLI----- 55
Query: 134 SGGNQNDTSLFPNVNST--WKTFNE----LQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
Q+ P V S W + E ++ L K G+ VGD+ + V + +
Sbjct: 56 ---EQDKPLHIPTVISIFDWVIYLESDKRFEKELQKMTGQTVGDIYSQDVACVGPDAPVS 112
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+ A ++ K + +PVV+G ++VG+I R ++VR +
Sbjct: 113 EVAEIMTSKKVQAVPVVEGR-RVVGIIGRIDMVRTMI 148
>gi|86134872|ref|ZP_01053454.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85821735|gb|EAQ42882.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 155
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 25/153 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT K L K ++D + L++ +I+G PV++D+ +L+G++S+ D + S S
Sbjct: 23 VSDYMTTK--LITFKAEDSLDHVIALLIKNKISGGPVVNDNNQLIGIISETDCIKHISES 80
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
K +N + S TN VG M + ++ N+ DAA +
Sbjct: 81 -----------------KYYN----MPSDTNN-TVGKYMVTDVDTIDKDMNIFDAAFKFI 118
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
+ RR PV D GKL+G +++ +V++AA+++K
Sbjct: 119 SSHRRRFPVCDN-GKLIGQLSQKDVLKAAIKVK 150
>gi|419707528|ref|ZP_14235011.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
gi|383282678|gb|EIC80659.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
Length = 219
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM K+ + V TTV A + + EK + PVI++D KLVG++++
Sbjct: 3 VKDFMAKR--VVYVSPQTTVAAAADIMREKGLRRLPVIEND-KLVGLITE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G D S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|344340335|ref|ZP_08771261.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343799993|gb|EGV17941.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 154
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-----A 129
V D M++ + +V T + E + R G PV+D D KLVG++++ DLL
Sbjct: 3 VKDVMSRS--VRSVNPDTRIVEVASLMCLYRFHGLPVVDGDEKLVGIIAERDLLHSLFPK 60
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
LD + + L + ++E+ L ++ +LMTP P+ V ++ A
Sbjct: 61 LDKLIAEGMHSVDL----DKEMARYSEILELKTE-------ELMTPNPVTVDPEMHVLRA 109
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
A +++ +RR+PV D G+LVG+++ G+V +A Q
Sbjct: 110 ATVMVRHNFRRIPVAD-QGRLVGMLSIGDVHKAIFQ 144
>gi|448451851|ref|ZP_21593023.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|448483974|ref|ZP_21605911.1| peptidase M50 [Halorubrum arcis JCM 13916]
gi|445810067|gb|EMA60099.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|445820458|gb|EMA70278.1| peptidase M50 [Halorubrum arcis JCM 13916]
Length = 394
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT ++DLH V T+V + + R+ E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + + + DL+ P N + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G LVGLI+R +++ A I+ G
Sbjct: 339 QEHGVGRLPVVDADGALVGLISRSDLMTAFNIIQTGG 375
>gi|398787640|ref|ZP_10549995.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
gi|396992803|gb|EJJ03896.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
Length = 231
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
N + V D MT + AV E +E + +++ PV+ + ++VGVVS+ DLL
Sbjct: 3 NTPHLVRDVMTTT--VAAVDRAARFKEIIETMERWQVSALPVLAAEGRVVGVVSEADLLP 60
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+ + P+ + ++++R + T G+LMT L V + L A
Sbjct: 61 KEEFRESD-------PDRLEQLRRVDDVRRAEAVT----AGELMTSPALTVRADATLSQA 109
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AR++ +RLPVVD +G L G+++R ++++ L+
Sbjct: 110 ARVMARESVKRLPVVDAHGVLSGIVSRADLLKVFLR 145
>gi|383786734|ref|YP_005471303.1| putative transcriptional regulator containing CBS domains
[Fervidobacterium pennivorans DSM 9078]
gi|383109581|gb|AFG35184.1| putative transcriptional regulator containing CBS domains
[Fervidobacterium pennivorans DSM 9078]
Length = 155
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT DL V TV+E +E L + ++G V+D D K+VG VS+ D++ S
Sbjct: 6 VKDFMTY--DLTFVFENDTVEEVIEILNKTGLSGLCVVDTDLKVVGFVSEDDIIKACLPS 63
Query: 135 GGNQNDTSLF-PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
N T+ F P+ N K + + + +G T V N L + ++
Sbjct: 64 YFNLLQTAAFLPDTNLFIKNLKNIAK-------EPIGKYATKPVFTVKPNDTLLYVSDMI 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ YR +PVVD L+G +TR ++++A+ I+ GE
Sbjct: 117 MRKGYRIIPVVDVNNVLLGYVTRAAILQSAINIEIPGE 154
>gi|336326365|ref|YP_004606331.1| IMP dehydrogenase [Corynebacterium resistens DSM 45100]
gi|336102347|gb|AEI10167.1| IMP dehydrogenase [Corynebacterium resistens DSM 45100]
Length = 510
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 60/127 (47%), Gaps = 36/127 (28%)
Query: 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
T VDE R RI+G PV DD+ LVG++++ D+ P+
Sbjct: 118 TIREVDELCARF---RISGLPVTDDEGVLVGIITNRDM--------------RFEPDFE- 159
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYG 208
+ V ++MT APLVV E + E A RLL E K +LP+VDG G
Sbjct: 160 -----------------RPVNEVMTKAPLVVAEEGVSTEAALRLLSENKVEKLPIVDGAG 202
Query: 209 KLVGLIT 215
KLVGLIT
Sbjct: 203 KLVGLIT 209
>gi|452949642|gb|EME55109.1| hypothetical protein H074_26412 [Amycolatopsis decaplanina DSM
44594]
Length = 201
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 18/131 (13%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
+T A E L EK T PV+D+D +L+G+V++ DL+ + FP+ +
Sbjct: 18 STAKHAAELLAEKGFTALPVVDEDDRLIGIVTEADLI------------RNRFPDDVRSG 65
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ R G VG +MT + N D R LL+ R +P+VDG K+V
Sbjct: 66 RDPEARPR-----PGLTVGQVMTMPATGMSTGANAADVGRALLDGHIRAMPIVDG-SKVV 119
Query: 212 GLITRGNVVRA 222
G++TRG+ VRA
Sbjct: 120 GIVTRGDFVRA 130
>gi|383786593|ref|YP_005471162.1| putative contains C-terminal CBS domains [Fervidobacterium
pennivorans DSM 9078]
gi|383109440|gb|AFG35043.1| putative transcriptional regulator, contains C-terminal CBS domains
[Fervidobacterium pennivorans DSM 9078]
Length = 313
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 31/149 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V +FMTK D+ VK TV + E L KRI+G PV+DD+ +VG++S D++ +
Sbjct: 17 SVKEFMTK--DVIYVKPDRTVAQVKEILRLKRISGVPVVDDNNIVVGIISIEDIIK--CL 72
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G N++ V + MT + + E+ L+D +
Sbjct: 73 ENGTLNES---------------------------VNEHMTKNVVCLSEDATLQDVIKHF 105
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+Y R PVVD GKLVG++T+ +++ A
Sbjct: 106 ERYRYGRFPVVDAQGKLVGIVTKNDILAA 134
>gi|340788671|ref|YP_004754136.1| CBS domain containing membrane protein [Collimonas fungivorans
Ter331]
gi|340553938|gb|AEK63313.1| CBS domain containing membrane protein [Collimonas fungivorans
Ter331]
Length = 390
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 82/156 (52%), Gaps = 14/156 (8%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R G T D M++ D+ +V+ T++++A L++ RI PVI+ +L+G+++ D +
Sbjct: 236 RFGAITCADIMSR--DVVSVEYGTSLEDAWALLLKHRIKALPVINSARRLIGIITQTDFM 293
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGK--VVGDLMTPAPLVVHENTNL 186
Q + ++ + K F ++R S + K VVG +MT A + ++
Sbjct: 294 --------RQANLQVYTGFDQKLKQF--IRRTTSTHSDKPEVVGQIMTSAVQSAEADAHI 343
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + L ++ +P+VDG +LVG++T+ ++V A
Sbjct: 344 VELVQPLSDSGIHHIPIVDGQRRLVGMVTQSDMVAA 379
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 155 NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
EL + D+M+ + V T+LEDA LLL+ + + LPV++ +L+G+I
Sbjct: 228 TELHAYQRRFGAITCADIMSRDVVSVEYGTSLEDAWALLLKHRIKALPVINSARRLIGII 287
Query: 215 TRGNVVRAA-LQI 226
T+ + +R A LQ+
Sbjct: 288 TQTDFMRQANLQV 300
>gi|323701708|ref|ZP_08113379.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333923567|ref|YP_004497147.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533244|gb|EGB23112.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333749128|gb|AEF94235.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 148
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 21/148 (14%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS---------ISGGN 137
+V TT+ E + L + +I+G PV+D+ KLVG+V++ DLL ++ I GG
Sbjct: 13 SVTKDTTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLLHKEANPRIPKFVGILGG- 71
Query: 138 QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETK 197
F V+ F +L L + ++MT + V ++T++ A L+LE
Sbjct: 72 ---ILYFGGVDQYKDDFKKLAALKA-------SEIMTSKVITVSKDTDVGTIATLMLENN 121
Query: 198 YRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+R+PV + GK++G+++R ++++ Q
Sbjct: 122 IKRIPVTES-GKVIGIVSRADIIKTIAQ 148
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+M + V ++T +++ A++L + K +PVVD GKLVG++T G+++
Sbjct: 5 DIMQTNVISVTKDTTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLL 54
>gi|357061469|ref|ZP_09122221.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
gi|355373957|gb|EHG21260.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
Length = 493
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 33/132 (25%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
+TV AL+ + E I G PV+DD+ LVG+V++ DL
Sbjct: 110 STVGGALQLMTEYHIGGIPVVDDEMHLVGIVTNRDL------------------------ 145
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVH-ENTNLEDAARLLLETKYRRLPVVDGYGKL 210
+ N+LQ K V D+MT LV + T+L AAR+L E K +LPVVD L
Sbjct: 146 RFENDLQ--------KKVEDVMTKENLVTTTQQTDLAGAARILQENKIEKLPVVDTENHL 197
Query: 211 VGLITRGNVVRA 222
VGLIT ++ +A
Sbjct: 198 VGLITYKDITKA 209
>gi|316935767|ref|YP_004110749.1| putative signal transduction protein [Rhodopseudomonas palustris
DX-1]
gi|315603481|gb|ADU46016.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris DX-1]
Length = 243
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 24/146 (16%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
++ +A +++ I+G PV+DDD KL+G++S+ D + I + W
Sbjct: 18 ASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIRRAEIGTERK---------RGRW 68
Query: 152 KTFNELQRLLS---------KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
L+ LL +G+ VG++MT P V E T++E +L+ + +R P
Sbjct: 69 -----LRMLLGPGTCAGDFVHEHGRKVGEVMTRHPYTVTEETSIETIVKLMEKHHVKRFP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKR 228
V+ G LVG++TR N++RA + R
Sbjct: 124 VMRG-DLLVGIVTRKNLLRAVADLAR 148
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+MT + + ++ DAA +++ LPVVD GKL+G+I+ G+ +R A
Sbjct: 6 IMTRQVVTIGPEASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIRRA 57
>gi|429740441|ref|ZP_19274130.1| inosine-5'-monophosphate dehydrogenase [Prevotella saccharolytica
F0055]
gi|429153131|gb|EKX95923.1| inosine-5'-monophosphate dehydrogenase [Prevotella saccharolytica
F0055]
Length = 494
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ TV +AL+ + + I G PV+D+D +LVG+V++ DL
Sbjct: 105 IRRGKTVKDALQMMHDYHIGGIPVVDEDNRLVGIVTNRDL-------------------- 144
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
F Q K + ++MT LV+ H+ T+L AA++L E K +LPVVD
Sbjct: 145 -----RFEHRQD-------KKIDEVMTSENLVITHQQTDLTAAAKILQENKIEKLPVVDA 192
Query: 207 YGKLVGLITRGNVVRA 222
+LVGLIT ++ +A
Sbjct: 193 QNRLVGLITYKDITKA 208
>gi|317970073|ref|ZP_07971463.1| CBS [Synechococcus sp. CB0205]
Length = 154
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V + MT + +V T + A++ + + I+G PV+D LVG +++ DL+ +S
Sbjct: 7 VSEVMTTP--IRSVGRETPLQNAVQVMSDHHISGLPVVDAAGALVGELTEQDLMVRES-- 62
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + + + + + + + + G VG++M+ AP +T L +AARLL
Sbjct: 63 GFDAGPYVMLLDAVIYLRNPLQWDKQVHQVLGNSVGEVMSQAPHTCSGDTLLPEAARLLH 122
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E +RL V+D + VG++TRG+VVRA
Sbjct: 123 EKGTQRLFVLDEQRRPVGVLTRGDVVRA 150
>gi|431799366|ref|YP_007226270.1| hypothetical protein Echvi_4053 [Echinicola vietnamensis DSM 17526]
gi|430790131|gb|AGA80260.1| putative transcriptional regulator, contains C-terminal CBS domains
[Echinicola vietnamensis DSM 17526]
Length = 153
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 24/137 (17%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+D ++ L +KRI+G PV+DD LVG++S+ D L I G N+T
Sbjct: 39 TIDHVVQVLTQKRISGAPVLDDGQNLVGIISEVD--CLKEIIRGKYNNTP---------- 86
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
R+ + + D++T P V + DAA LE K RR PV+ GKL+G
Sbjct: 87 ------RMAGRVREHMTKDVVTMDPEV-----TIFDAAHRFLELKIRRFPVLKD-GKLLG 134
Query: 213 LITRGNVVRAALQIKRD 229
I+ +++RA ++K +
Sbjct: 135 QISLSDIIRAMPRLKSE 151
>gi|429195457|ref|ZP_19187489.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428668823|gb|EKX67814.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 241
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TVG+ MT+ ++ + T E + L RI+G PV+D D K+VGV+S+ DL+
Sbjct: 3 TCTVGEVMTR--EVVGARQETPFKEVVRLLDRHRISGLPVVDADDKVVGVISETDLIRRQ 60
Query: 132 SISGGNQNDTSL-FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ P + + +K G LM+ + VH + DAA
Sbjct: 61 AAQAERDRGRGFRLPALRRRTRRTT------AKARATTAGQLMSTPAITVHPEQGVADAA 114
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+++ RLPVVD +L+G+ TR +++R L+
Sbjct: 115 QVMERHHVERLPVVDEEDRLIGIATRRDLLRVFLR 149
>gi|162451567|ref|YP_001613934.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
gi|161162149|emb|CAN93454.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
Length = 263
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 56 AHNGVGITNSVPPRNGTYTVG--------DFMTKKEDLHAVKTTTTVDEALERLVEKRIT 107
+H G S P RN V + MTK D+ ++T ++D+ LV I+
Sbjct: 75 SHAAPGTEESDPLRNAGVDVAVNPEAPLAEIMTK--DVICIRTEVSLDDITALLVRHEIS 132
Query: 108 GFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNG 166
G PV+D K VG+VS D+L A D G+ ++ + + Q
Sbjct: 133 GMPVVDAAGKPVGMVSRADVLRAADE--RGDTEESRRVASRSGEVAPLEMSQGFHVYEPV 190
Query: 167 KVVG-DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MTP + +HE+ ++ AA L+ RLPVV GK+VG+++ +V+R
Sbjct: 191 RVTARDVMTPVVVQLHESASIRQAASLMAYEGVHRLPVVSDDGKVVGILSSLDVLR 246
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+ ++MT + + +L+D LL+ + +PVVD GK VG+++R +V+RAA
Sbjct: 102 LAEIMTKDVICIRTEVSLDDITALLVRHEISGMPVVDAAGKPVGMVSRADVLRAA 156
>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
Length = 144
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQND 140
K D+ + + T+ E + L EKRI +++D+ +L G+VS+ D++ + + G
Sbjct: 10 KGRDVVTLTPSVTLAEVAQVLSEKRIGAIILVEDNGRLAGIVSERDIVRVVAARG----- 64
Query: 141 TSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
P+V + ++V + MTP + V E+ ++++A RL+ E ++R
Sbjct: 65 ----PDVLT-----------------QLVKEAMTPKVVTVREDMSIDEAMRLMTEKRFRH 103
Query: 201 LPVVDGYGKLVGLITRGNVVR 221
LPVVD +LVG ++ G+VV+
Sbjct: 104 LPVVDETEQLVGFVSIGDVVK 124
>gi|148257031|ref|YP_001241616.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
gi|146409204|gb|ABQ37710.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
Length = 242
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 14/141 (9%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T++ EA ++++ ++G PV+D KL+GVVS+ D + I G + W
Sbjct: 18 TSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIRRTEIGTGRK---------RGRW 68
Query: 152 KTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F + +G+ V ++MT +PL + E+ L + ++ + +RLPVV G
Sbjct: 69 LRFILGPGKSAADFVHEHGRKVSEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVKG- 127
Query: 208 GKLVGLITRGNVVRAALQIKR 228
++VG+++R N+++A + R
Sbjct: 128 DQVVGIVSRANLLQAVATLGR 148
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V +T++ +AA ++L+ LPVVD GKL+G+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIR 55
>gi|372273001|ref|ZP_09509049.1| hypothetical protein MstaS_18049 [Marinobacterium stanieri S30]
Length = 137
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 25/156 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M +L + T + +A+ L E I+G PV+D + LVG++S+ D L
Sbjct: 7 VQDYMAT--NLISFSPETGLFDAIRALQEYGISGAPVVDAEGALVGMLSELDCLR----- 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+T++E + +G VG M+ + +L +AARL +
Sbjct: 60 -------------AILTQTYHEEE----MGSGGHVGRYMSSPVETIDYGADLTEAARLFI 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
+ K RR+PVV G GKLVG I+R +V+RA + +DG
Sbjct: 103 DKKLRRMPVVRG-GKLVGQISRRDVLRAVEEFAKDG 137
>gi|298290161|ref|YP_003692100.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296926672|gb|ADH87481.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 228
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 89 KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148
K T V + + L+E+RI+G P++DD K+VG++S+ DL+ + L V+
Sbjct: 15 KATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIRRAEAGTERRRSWWLQAFVD 74
Query: 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG 208
L K +G+ D+M P+ +T L + A L+ +R+P+V+ G
Sbjct: 75 D-----GTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVE-KG 128
Query: 209 KLVGLITRGNVVRA 222
LVG+++R N+++A
Sbjct: 129 HLVGIVSRSNLIQA 142
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 171 DLMTPAPLVVHENTNLE-DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+MT +P++ + T+L A+ LLE + +P+VD GK+VG+I+ G+++R A
Sbjct: 5 DVMT-SPVITAKATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIRRA 57
>gi|385675865|ref|ZP_10049793.1| hypothetical protein AATC3_08107 [Amycolatopsis sp. ATCC 39116]
Length = 195
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T+ EA L + T PV+DDD +LVG+V++ DL+A P T
Sbjct: 12 TSAKEAARILSSRGFTALPVVDDDERLVGIVTEADLVA------------DRLPRDPRTH 59
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ + + G V ++MT + T+L +R LL+ + R +P+ +G G++V
Sbjct: 60 EDRTD------RAPGATVAEVMTSPATAMSPGTDLATLSRALLDARIRAMPIAEG-GQVV 112
Query: 212 GLITRGNVVR 221
G++TRG++VR
Sbjct: 113 GIVTRGDIVR 122
>gi|448426713|ref|ZP_21583486.1| peptidase M50 [Halorubrum terrestre JCM 10247]
gi|445679200|gb|ELZ31671.1| peptidase M50 [Halorubrum terrestre JCM 10247]
Length = 394
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + DLH V T+V + + R+ E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRGDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + + + DL+ P N + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G+LVGLI+R +++ A I+ G
Sbjct: 339 QEHGVGRLPVVDADGELVGLISRSDLMTAFNIIQTGG 375
>gi|303325679|ref|ZP_07356122.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345892287|ref|ZP_08843110.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
gi|302863595|gb|EFL86526.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345047426|gb|EGW51291.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
Length = 222
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 109 FPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV 168
PV+DD +VG++SD D+ D S P+ +T + E+ LL++ K
Sbjct: 35 LPVLDDKGHVVGIISDRDV-----------RDAS--PSKATTLDMY-EMHYLLAELKAK- 79
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
D+MTP P V +E AA L+L+ K+ LPVV+ G+LVG+I+ +V +A + I
Sbjct: 80 --DIMTPRPFTVKPTDTVEKAAMLMLDNKFGGLPVVEESGRLVGIISDQDVFKALVSI 135
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISG 135
D MT + VK T TV++A +++ + G PV+++ +LVG++SD D+ AL SI+G
Sbjct: 80 DIMTPRP--FTVKPTDTVEKAAMLMLDNKFGGLPVVEESGRLVGIISDQDVFKALVSITG 137
Query: 136 GNQNDTSL 143
+ L
Sbjct: 138 VREGGIQL 145
>gi|322373958|ref|ZP_08048493.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
gi|321277330|gb|EFX54400.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
Length = 219
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM K+ + V TTV A + + EK + PVI++D KLVG++++
Sbjct: 3 VKDFMAKR--VVYVSPQTTVAAAADIMREKGLRRLPVIEND-KLVGLITE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G D S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 KNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|271966184|ref|YP_003340380.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270509359|gb|ACZ87637.1| CBS domain containing membrane protein [Streptosporangium roseum
DSM 43021]
Length = 226
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT++ + +V + E L+ ++ PV+D D + GVVS+ DLL +
Sbjct: 5 VKDVMTRR--VISVGEDACFKDIAELLITHAVSAVPVLDSDGHVTGVVSEADLLHKEE-- 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + + P + E K GKV +LMT + V + + A RL+
Sbjct: 61 GRKRFHGASCPPPQTGPDQGPEA----GKARGKVARELMTAPAVTVSMDVPVAAAGRLME 116
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
+RLPV+DG+G L G+++R ++++ + RD ER
Sbjct: 117 HHGVKRLPVLDGHGHLAGIVSRHDLLKVFARADRDIERE 155
>gi|430760272|ref|YP_007216129.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430009896|gb|AGA32648.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 160
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V + VD ++ LVE+R+ G PV+D D L+G+V+ DL + ++ D F
Sbjct: 14 VPSEMPVDALVDLLVERRVNGVPVVDADGVLLGMVTTGDL--IHRVADARVEDRGSFWRE 71
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ F + G ++M+ P V + ++ AARLL+E + + LPV+D
Sbjct: 72 SFYKSVFRPNGPEPNPAEGATAAEVMSRNPAFVAPSDDMAVAARLLIEHRVKSLPVLDN- 130
Query: 208 GKLVGLITRGNVVRA 222
G+LVG+I+R +++R
Sbjct: 131 GRLVGMISRLDLLRC 145
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
V +LMTPAP+ V ++ LL+E + +PVVD G L+G++T G+++
Sbjct: 3 VRELMTPAPVTVPSEMPVDALVDLLVERRVNGVPVVDADGVLLGMVTTGDLI 54
>gi|150398194|ref|YP_001328661.1| signal-transduction protein [Sinorhizobium medicae WSM419]
gi|150029709|gb|ABR61826.1| putative signal-transduction protein with CBS domains
[Sinorhizobium medicae WSM419]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 83/155 (53%), Gaps = 9/155 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT K + + +V +A + + + ++G PV++DD +L+GV+S+ DL+ +
Sbjct: 3 VKDVMTTK--VVKLSPDNSVRQAAKLMFDYHVSGVPVVNDDGRLLGVISEGDLIRRTELC 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + L ++ T N + + + + VGD+MT P+ + E L A L+
Sbjct: 61 SGA---SVLMADM--TIDPVNRANAFIRRCSWR-VGDVMTADPVTIEEEAPLARVAGLMQ 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
E +R+PV+ G+LVG+++R ++++A K D
Sbjct: 115 ERGIKRIPVMRD-GELVGIVSRADLLQAIFSTKPD 148
>gi|255659629|ref|ZP_05405038.1| CBS domain protein [Mitsuokella multacida DSM 20544]
gi|260848191|gb|EEX68198.1| CBS domain protein [Mitsuokella multacida DSM 20544]
Length = 149
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MTK D+ VK ++ E + +V++ ++G PV+DDD + G+VS+ DL+ +
Sbjct: 3 VKDIMTK--DVVTVKKDASIREIAQTIVDRDVSGLPVVDDDGTVCGIVSEGDLVRKE--F 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
D + E Q K LMT + V + ++ A++L
Sbjct: 59 APELPDELCILGAVIYYSGLREYQDAFRKIAAISAEQLMTKKLISVKPDDDVSKVAKILY 118
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
E +R+PV+D L+G+++R ++V+ L
Sbjct: 119 EKHIKRVPVLDDEKHLLGIVSRRDIVKMML 148
>gi|145351771|ref|XP_001420237.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580471|gb|ABO98530.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 133
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 28/142 (19%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN--DTSLFP 145
V+ +V EA++ LV+ RI+ PV++ +++GVVS+YDL+A ++ D +FP
Sbjct: 12 VRPDESVFEAMKLLVDNRISAVPVVNASGEVLGVVSEYDLMARVGKKETTKSVADDGMFP 71
Query: 146 NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTN------LEDAARLLLETKYR 199
R + K +G V M HE T L +A L+L
Sbjct: 72 -------------RRMYKASGSKVSTAM-------HEATTCTPDMPLVEATELMLNGNLA 111
Query: 200 RLPVVDGYGKLVGLITRGNVVR 221
R+PVVD G LVG+++RG+++R
Sbjct: 112 RMPVVDDRGALVGILSRGDIMR 133
>gi|406672855|ref|ZP_11080080.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
gi|423315693|ref|ZP_17293598.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405585797|gb|EKB59600.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405587399|gb|EKB61127.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
Length = 486
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 31/123 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ EA E + +I+G PV+D++ L+G++++ D+ Q D S+
Sbjct: 108 TLGEAKETMARYKISGLPVVDEENNLIGIITNRDVKY--------QEDLSV--------- 150
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
+++ L++K N L+T H++TNLE+A ++LLE + +LP+VD KLVG
Sbjct: 151 ---KVEHLMTKEN------LITS-----HKDTNLEEAKKILLENRVEKLPIVDEKNKLVG 196
Query: 213 LIT 215
LIT
Sbjct: 197 LIT 199
>gi|317154893|ref|YP_004122941.1| hypothetical protein Daes_3203 [Desulfovibrio aespoeensis Aspo-2]
gi|316945144|gb|ADU64195.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 225
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT ++ + ++V +A + L +K I FPV+D LVG+VSD D+
Sbjct: 3 VRDWMTV--NVMTLGVNSSVMDAADILRQKDIRQFPVVDGQGVLVGIVSDRDIR------ 54
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ + P + + N GD+MTP PL V +T + A +L+
Sbjct: 55 --DAMPSKFIPGDCTDGRE--------GGLNTLTAGDIMTPGPLTVAPDTAINAVAEILV 104
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVR 221
K LPVV+G GKLVG+IT+ +V+R
Sbjct: 105 RHKIGGLPVVEG-GKLVGIITQADVMR 130
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+V D MT + + N+++ DAA +L + R+ PVVDG G LVG+++
Sbjct: 2 LVRDWMTVNVMTLGVNSSVMDAADILRQKDIRQFPVVDGQGVLVGIVS 49
>gi|390565046|ref|ZP_10245762.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390171708|emb|CCF85092.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 271
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 59 GVGITNSVPP-RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK 117
G+G+ V G TVG M+++ + AV + + L L R V+D + +
Sbjct: 115 GIGLVEPVGSVETGAGTVGAVMSRQ--VPAVGADAGLGDVLAALASSRQNRVVVVDGERR 172
Query: 118 LVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAP 177
+GV++D +LL + + + P + +L NG DLM P
Sbjct: 173 PIGVITDAELL--------RRVEPAAQPGLAQVL--MRKLGHREVVPNGARAVDLMLPRG 222
Query: 178 LVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
V T + +A RL+LE Y+ LPVVD G+LVGL+ R +++RA
Sbjct: 223 ETVRAETPVGEAIRLMLERAYKILPVVDAEGRLVGLVDRADLLRA 267
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 109 FPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV 168
PV++ + +LVG+V+ DL+ GG + L P ++ R L +
Sbjct: 1 MPVVNREGRLVGLVTRGDLIE----RGGLRLRVELLPALDGA--AVERELRRLELESPMT 54
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
DLMT + V T+L A RL+ E + LPVVD G++VG+I+R +V+R
Sbjct: 55 AADLMTRDVVTVRPETSLAAAGRLMAEQRLNPLPVVDAGGRVVGIISRVDVLR 107
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 17/149 (11%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
T D MT+ D+ V+ T++ A + E+R+ PV+D ++VG++S D+L +
Sbjct: 53 MTAADLMTR--DVVTVRPETSLAAAGRLMAEQRLNPLPVVDAGGRVVGIISRVDVLRTVT 110
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
G L V S +T VG +M+ V + L D
Sbjct: 111 EPG---LGIGLVEPVGSV------------ETGAGTVGAVMSRQVPAVGADAGLGDVLAA 155
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L ++ R+ VVDG + +G+IT ++R
Sbjct: 156 LASSRQNRVVVVDGERRPIGVITDAELLR 184
>gi|433616661|ref|YP_007193456.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
gi|429554908|gb|AGA09857.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
Length = 223
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT K + + +V +A + + + ++G PV+DDD +L+GV+S+ DL+ +
Sbjct: 3 VKDVMTTK--VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTELC 60
Query: 135 GGN---QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G + ++ P+ + N R S VGD+MT P+ + E L A
Sbjct: 61 SGASVLMAEMAIDPDDRA-----NAFIRRCSWR----VGDVMTANPVTIEEEAPLARVAG 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L+ E +R+PV+ G+LVG+++R ++++A K D
Sbjct: 112 LMQERGIKRIPVMRD-GELVGIVSRADLLQAIFSTKPD 148
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT + + + ++ AA+L+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|22537717|ref|NP_688568.1| AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76786880|ref|YP_330197.1| hypothetical protein SAK_1593 [Streptococcus agalactiae A909]
gi|76799160|ref|ZP_00781343.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|406709961|ref|YP_006764687.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
gi|424048975|ref|ZP_17786526.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|22534606|gb|AAN00441.1|AE014263_20 AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76561937|gb|ABA44521.1| CBS domain protein [Streptococcus agalactiae A909]
gi|76585490|gb|EAO62065.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|389649597|gb|EIM71074.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|406650846|gb|AFS46247.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
Length = 219
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 21/159 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTKK L V TTV EA + L E + PV+++D +LVG+V++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + P+ +T + E+ LL+KT + D+M + V + +LEDA L++
Sbjct: 50 -GTMAEAQ--PS-KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
K LPVVD G+L G++T +V +A L+I G+ S
Sbjct: 103 SRKIGVLPVVDN-GQLYGIVTDRDVFKAFLEIAGYGQES 140
>gi|323529296|ref|YP_004231448.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407710136|ref|YP_006794000.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
gi|323386298|gb|ADX58388.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407238819|gb|AFT89017.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
Length = 229
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT K + +V T+ E VE I+G PV+D D + G++S+ DLL I
Sbjct: 5 DVMTGK--VISVTPDMTIREVARLFVENHISGAPVLDSDGSVAGMISEGDLLRRSEIGTD 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ TS W +E R KT+ V D+MT + V +T L + A +L
Sbjct: 63 ERKRTSWL----DFWSASHE-ARDYVKTHAAKVSDVMTTNVVTVGPDTPLGEVAGVLETR 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV G+LVG+++R N+V+A
Sbjct: 118 HIKRVPVTKA-GRLVGIVSRANLVQA 142
>gi|20092371|ref|NP_618446.1| hypothetical protein MA3565 [Methanosarcina acetivorans C2A]
gi|19917622|gb|AAM06926.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI-SGGNQNDTS 142
D+ K TV EA + L E I+G PV++D +LVGVVS+ DLL L I GN S
Sbjct: 11 DVVFCKPDDTVREAAKLLKENNISGAPVLEDG-QLVGVVSEADLLELLVIPEKGNLWLPS 69
Query: 143 LFPNVNSTWK---TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
F + + ++ E +++LS V ++MT + ++E+A+ L++ +
Sbjct: 70 PFEVIEVPIRELLSWEETKKMLSDVGSTKVEEMMTKEVHTISSEASVEEASELMVRHRIN 129
Query: 200 RLPVVDGYGKLVGLITRGNVVRA 222
RLPV++ ++VG++TRG+++
Sbjct: 130 RLPVMEN-DRVVGIVTRGDIIEG 151
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
G+ V + MTK ++H + + +V+EA E +V RI PV+++D ++VG+V+ D++
Sbjct: 95 GSTKVEEMMTK--EVHTISSEASVEEASELMVRHRINRLPVMEND-RVVGIVTRGDII 149
>gi|386360020|ref|YP_006058265.1| hypothetical protein TtJL18_0573 [Thermus thermophilus JL-18]
gi|383509047|gb|AFH38479.1| CBS-domain-containing membrane protein [Thermus thermophilus JL-18]
Length = 150
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL-DSI 133
V D MT +D + T++EA R++E R GFPV+D + KL+GVV +LL +++
Sbjct: 3 VRDLMT--QDPVVLGPEATLEEAARRILETRYGGFPVVDGEGKLLGVVQVEELLPHPENV 60
Query: 134 SGGNQNDTSLFPNVNSTW---KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ LF W E+ R +T K V P VH + L A
Sbjct: 61 PFSDVEALQLF----GEWVDEDVLAEIYRRYQRTPVKAVMRTEIPK---VHPDDPLGKAL 113
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+++L T LPVVD GK+VG++TR + ++ L
Sbjct: 114 KVVLTTDLHHLPVVDEKGKVVGILTRSDFLKLIL 147
>gi|288803876|ref|ZP_06409301.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
D18]
gi|288333641|gb|EFC72091.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
D18]
Length = 494
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 33/131 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV +ALE + + I G PV+D++ LVG+V++ DL
Sbjct: 110 TVKDALEMMADYHIGGIPVVDEENHLVGIVTNRDL------------------------- 144
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+R L K ++ D+MT LV H+ T+L AA +L E K +LPVVD +LV
Sbjct: 145 ---RFERHLDK----LIDDVMTKENLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLV 197
Query: 212 GLITRGNVVRA 222
GLIT ++ +A
Sbjct: 198 GLITYKDITKA 208
>gi|254381637|ref|ZP_04997001.1| CBS [Streptomyces sp. Mg1]
gi|194340546|gb|EDX21512.1| CBS [Streptomyces sp. Mg1]
Length = 216
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 73 YTVGDFMTKKEDLHAVKTT-TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
YTV D MTK + A+ER ++T PVI+ + ++VGVVS+ DLL +
Sbjct: 6 YTVNDVMTKTVVTVTAAAEFKEIATAMERW---KVTAVPVIEGEGRVVGVVSEADLLTKE 62
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ SL + T +K LMT + + + L AAR
Sbjct: 63 EF---HAQGPSLIEQMRRLGDT--------AKAGSVRAEQLMTSPAVTIRPDATLPRAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L+ + +RLPVVD G L+G+++R ++++ L+ D
Sbjct: 112 LMADRHIKRLPVVDANGTLLGIVSRADLLKVFLRSDED 149
>gi|424887354|ref|ZP_18310959.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175126|gb|EJC75169.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 240
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V +T+V EA + +++ RI+G PV+D + LVG+VS+ D L ++ + + L +
Sbjct: 14 VTASTSVAEAAKLMLDNRISGLPVVDANGTLVGIVSEGDFLRRSELN-TERKRSWLLEWL 72
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
S +E R T+G+ V ++MT + + +A RL+ +RLPVV
Sbjct: 73 ASPRTIADEYVR----THGRRVEEVMTSPVSAIAPTAAISEAVRLMERRDIKRLPVV-AE 127
Query: 208 GKLVGLITRGNVVRAALQ 225
G+LVG++ R +++RA Q
Sbjct: 128 GRLVGILARSDLLRALSQ 145
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V +MT + V +T++ +AA+L+L+ + LPVVD G LVG+++ G+ +R
Sbjct: 2 LVQTIMTSPAITVTASTSVAEAAKLMLDNRISGLPVVDANGTLVGIVSEGDFLR 55
>gi|297560081|ref|YP_003679055.1| hypothetical protein Ndas_1108 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844529|gb|ADH66549.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 221
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T TVGD MT + A + E + + ++ PV+D +++GVVS DLL
Sbjct: 2 TKTVGDLMTTS--VLAARDDAGYKELAAFMRDHHVSAVPVVDGGHRVLGVVSTADLL--- 56
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNE-LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ + + P T + F E L R+ K+ G +LMT + V T +AA
Sbjct: 57 -LKLADPD-----PEEGYTGEPFRERLARI--KSTGTTARELMTSPAVTVTAATAPREAA 108
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
L+ +RRLPVVDG G+LVGL+ R +++
Sbjct: 109 GLMRRHGFRRLPVVDGDGRLVGLVGRSDLL 138
>gi|258515971|ref|YP_003192193.1| hypothetical protein Dtox_2805 [Desulfotomaculum acetoxidans DSM
771]
gi|257779676|gb|ACV63570.1| CBS domain-containing membrane protein [Desulfotomaculum
acetoxidans DSM 771]
Length = 155
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL----- 128
TV D MTK ++ AV V++ L++ I+G PVID+ K+VG++S+ DL+
Sbjct: 5 TVKDIMTK--EVIAVGPDDNVEKVARLLLDHNISGLPVIDEKGKVVGIISEGDLIIQEKE 62
Query: 129 ----ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
A+ ++ GG N N K EL+++++ V DLMT V
Sbjct: 63 IKAPAMTTLLGG----VIFLENPNRFLK---ELKKIIAVE----VKDLMTRKVYSVGPEA 111
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ ++ E + R+PV++ GKL+G+ITR +++ A +
Sbjct: 112 TIAKVTGIMSEKRINRIPVLNDEGKLLGIITRKDIIENAFK 152
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
V D+MT + V + N+E ARLLL+ LPV+D GK+VG+I+ G+++ +IK
Sbjct: 6 VKDIMTKEVIAVGPDDNVEKVARLLLDHNISGLPVIDEKGKVVGIISEGDLIIQEKEIK 64
>gi|367472385|ref|ZP_09471968.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365275469|emb|CCD84436.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 242
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T++ +A ++++ ++G PV+D KLVGVVS+ D + I G +
Sbjct: 14 VSPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEIGTGRK--------- 64
Query: 148 NSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
W F + +G+ V ++MT +PL + E+ L + L+ + +RLPV
Sbjct: 65 RGRWLRFILGPGKSAADFVHEHGRKVSEVMTRSPLTITEDAALAEIVELMEKNHVKRLPV 124
Query: 204 VDGYGKLVGLITRGNVVRAALQIKR 228
V G ++VG+++R N+++A + R
Sbjct: 125 VKG-DQVVGIVSRANLLQAVATLGR 148
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V +T++ DAA ++L+ LPVVD GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVSPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIR 55
>gi|225849786|ref|YP_002730020.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
gi|225645461|gb|ACO03647.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
Length = 489
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 33/131 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV EALE + +I+G PV+D + KL+G++++ DL
Sbjct: 107 TVKEALEIMATYKISGVPVVDSENKLIGILTNRDL------------------------- 141
Query: 153 TFNELQRLLSKTN-GKVVGDLMTPAPLV-VHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
R L K + K V MT APL+ E T+LE+A +L + K +LPVVD G L
Sbjct: 142 ------RFLHKKDYRKPVSQFMTKAPLITAKEGTSLEEAMDILQKHKVEKLPVVDDEGHL 195
Query: 211 VGLITRGNVVR 221
GLIT ++V+
Sbjct: 196 KGLITIKDIVK 206
>gi|407690602|ref|YP_006814186.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
gi|407321777|emb|CCM70379.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
Length = 223
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT K + + +V +A + + + ++G PV+DDD +L+GV+S+ DL+ +
Sbjct: 3 VKDVMTTK--VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTELC 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + L N+ + + + + + VGD+MT P+ + E L A L+
Sbjct: 61 SGA---SVLMANM--AIDPDDRANAFIRRCSWR-VGDVMTANPVTIEEEAPLARVAGLMQ 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
E +R+PV+ G+LVG+++R ++++A K D
Sbjct: 115 ERGIKRIPVMRD-GELVGIVSRADLLQAIFSTKPD 148
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT + + + ++ AA+L+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55
>gi|385804539|ref|YP_005840939.1| metalloprotease [Haloquadratum walsbyi C23]
gi|339730031|emb|CCC41337.1| probable metalloprotease [Haloquadratum walsbyi C23]
Length = 392
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 31/160 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVGD MT++ DL V+ +V LER+ +R TG+PV+D+ LVGVV+ D
Sbjct: 250 TVGDIMTERSDLDVVEQNVSVATLLERMFTERHTGYPVVDNG-GLVGVVTLDDA------ 302
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R V D+MTP ++ + + DA + +
Sbjct: 303 ------------------RSVEEVER-----EAYRVSDVMTPDVTTINPDADAMDAMQRM 339
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
E RLPV++ +LVGLI+R +++ A IK G ++
Sbjct: 340 QENDIGRLPVIENT-ELVGLISRSDLMTALNIIKSRGSQT 378
>gi|110668953|ref|YP_658764.1| metalloprotease [Haloquadratum walsbyi DSM 16790]
gi|109626700|emb|CAJ53167.1| probable metalloprotease [Haloquadratum walsbyi DSM 16790]
Length = 392
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 31/160 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVGD MT++ DL V+ +V LER+ +R TG+PV+D+ LVGVV+ D
Sbjct: 250 TVGDIMTERSDLDVVEQNVSVATLLERMFTERHTGYPVVDNG-GLVGVVTLDDA------ 302
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R V D+MTP ++ + + DA + +
Sbjct: 303 ------------------RSVEEVER-----EAYRVSDVMTPDVTTINPDADAMDAMQRM 339
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
E RLPV++ +LVGLI+R +++ A IK G ++
Sbjct: 340 QENDIGRLPVIENT-ELVGLISRSDLMTALNIIKSRGSQT 378
>gi|343083062|ref|YP_004772357.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342351596|gb|AEL24126.1| CBS domain containing protein [Cyclobacterium marinum DSM 745]
Length = 152
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 80/178 (44%), Gaps = 33/178 (18%)
Query: 52 VKAFAHNGVGITNSVPPR--NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGF 109
VK+F GV PP+ + V DFMT +L T+D + L KRI+G
Sbjct: 2 VKSF--QGV---RQAPPKISDQPILVKDFMT--TNLITFSAEDTIDHVITVLTRKRISGA 54
Query: 110 PVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVV 169
PV+DD+ +LVG++S+ D L I G +T FP V
Sbjct: 55 PVVDDNGRLVGMISEGD--CLKEIIKGQYTNTPKFP---------------------ASV 91
Query: 170 GDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
+ MT + ++ DAA L K RR PVV KL+G I+ ++VRA ++K
Sbjct: 92 AEHMTTEVFTLPPEISIFDAADRFLTLKIRRFPVVKDQ-KLIGQISVSDIVRAMPKLK 148
>gi|307719578|ref|YP_003875110.1| hypothetical protein STHERM_c19020 [Spirochaeta thermophila DSM
6192]
gi|386347674|ref|YP_006045923.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|306533303|gb|ADN02837.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
gi|339412641|gb|AEJ62206.1| CBS domain containing membrane protein [Spirochaeta thermophila DSM
6578]
Length = 214
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 21/150 (14%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V TT+ +A E + ++I PVID+ ++VG+VS+ DLL P+
Sbjct: 14 VTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLLYAS-------------PSP 60
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+T + E+ +LLSK K V + TP + V E+T +EDAAR++++ LPVV G
Sbjct: 61 ATTLNVY-EMAQLLSKVRIKEV--MRTPV-ITVTEDTYIEDAARIMVDNNIGGLPVVRGE 116
Query: 208 GKLVGLITRGNVVRAALQI---KRDGERST 234
KLVG+IT ++ + +++ ++ G R T
Sbjct: 117 -KLVGIITESDIFKRFVELFGTRKKGVRLT 145
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
V +MT P+ V T L DA L+ K RLPV+D G++VG+++ +++ A+
Sbjct: 3 VAQVMTHNPVTVTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLLYAS 57
>gi|435853072|ref|YP_007314391.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
gi|433669483|gb|AGB40298.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
Length = 148
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 22/148 (14%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS---------I 133
E++ V + E + ++E I+G PVI+DD KLVG++S+ DL+ + +
Sbjct: 9 ENVITVGPKMKIKEVAQIMIENSISGLPVIEDD-KLVGIISEGDLIVKEKKLDLPDYIYV 67
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
GG +F ++F++ ++ L K G V DLMT + V +++ D A +
Sbjct: 68 LGG------IF-----YLESFDDFEQDLKKMAGIEVADLMTKDVITVGPQSDVMDIATIF 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
+E R+PVV KL+G++TR +++R
Sbjct: 117 VEEGVNRVPVVKD-NKLLGIVTRADIIR 143
>gi|455650952|gb|EMF29706.1| transport protein [Streptomyces gancidicus BKS 13-15]
Length = 224
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 18/155 (11%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + MT+ D+ + E + L E +T PV+DD + +GVVS+ DLL S
Sbjct: 5 TVAELMTR--DVVKARRDLPFKEIVRLLAENDVTAVPVVDDLGRPMGVVSEADLLRKSS- 61
Query: 134 SGGNQNDTS---LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+Q D S P++ + W+ +K G +LM+ + ++ +AA
Sbjct: 62 ---DQADPSGRVPVPHLEA-WER--------AKAEGSRAEELMSAPAVCARPEWSVVEAA 109
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
RL+ +RLPVVD +L+G+++RG+++R L+
Sbjct: 110 RLMEAQHVKRLPVVDETDRLLGIVSRGDLLRVFLR 144
>gi|158522990|ref|YP_001530860.1| signal transduction protein [Desulfococcus oleovorans Hxd3]
gi|158511816|gb|ABW68783.1| putative signal transduction protein with CBS domains
[Desulfococcus oleovorans Hxd3]
Length = 423
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 64 NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
N+ PR +V D MT D +V + T +DE L+ TG PV+D + VGV++
Sbjct: 109 NAFFPRQ--LSVRDVMTA--DPRSVTSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGVIT 164
Query: 124 DYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHEN 183
DL+ + + ++ +LS+ G+ +MT + + E+
Sbjct: 165 QGDLI---------RKGGLPLRLGLLAESDQDRMKSVLSQMAGRQAEQVMTGPAVTIAED 215
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L +A L++ ++RLPV D G+L G+++R ++ R ++
Sbjct: 216 RPLAEAVDLMISRNFKRLPVTDKEGRLCGMVSRLDIFRTVMR 257
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 45 FFTVSREV---KAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERL 101
F TV RE AF V +T+ V D + D H V T V + L +
Sbjct: 252 FRTVMREAPDWNAFRSQKVDVTH-------LKQVADI--ARRDTHTVSPDTPVADVLRLI 302
Query: 102 VEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLL 161
+ I V+D + L+G++SD DLL + L V S +K +E L
Sbjct: 303 GDNDIQRVAVVDAENNLLGLISDKDLLR--CFAQKQSGIWGLLSRVGSAFK-HDEADTCL 359
Query: 162 SKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ G G +M + V E +E+A L++E +RLPVVD G+ G+I+R +++R
Sbjct: 360 A---GATAGTVMNTELITVKEEMLIEEAIGLMVERGLKRLPVVDAEGRFAGMISRDSLLR 416
Query: 222 AAL 224
Sbjct: 417 TGF 419
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 96 EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFN 155
EA++ ++ + PV D + +L G+VS D+ + P+ W F
Sbjct: 220 EAVDLMISRNFKRLPVTDKEGRLCGMVSRLDIF---------RTVMREAPD----WNAFR 266
Query: 156 ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+ + T+ K V D+ V +T + D RL+ + +R+ VVD L+GLI+
Sbjct: 267 SQK--VDVTHLKQVADIARRDTHTVSPDTPVADVLRLIGDNDIQRVAVVDAENNLLGLIS 324
Query: 216 RGNVVRAALQ 225
+++R Q
Sbjct: 325 DKDLLRCFAQ 334
>gi|92117482|ref|YP_577211.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800376|gb|ABE62751.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 226
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 18/158 (11%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN 137
MT+K + V T++ +A ++++RI+G PV+D+ +L+GVVS+ D + I G
Sbjct: 6 IMTRK--VTTVTADTSILDAANLMLQQRISGLPVVDETGRLIGVVSEGDFVRRSEI--GT 61
Query: 138 QNDTSLFPNVNSTWKTF-----NELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAAR 191
Q P + W F + + + NG+ V ++MT L E+ L D R
Sbjct: 62 QR-----PRIR--WLEFLMGVAGNVAQDFVRENGRKVWEIMTQDDLCTTTEDMPLADLVR 114
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L+ +RLPVV G+ ++G++TR +++R+ RD
Sbjct: 115 LMERRNVKRLPVVRGH-TVIGIVTRTDLLRSVASFARD 151
>gi|345885017|ref|ZP_08836410.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. C561]
gi|345042072|gb|EGW46180.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. C561]
Length = 494
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ TV +AL+ + + I G PV+D+D LVG+V++ DL
Sbjct: 105 IRKGRTVKDALQMMADYHIGGIPVVDEDNHLVGIVTNRDL-------------------- 144
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
+R L K ++ D+MT LV H+ T+L AA +L E K +LPVVD
Sbjct: 145 --------RFERHLDK----LIDDVMTKENLVTTHQKTDLTAAAHILQENKIEKLPVVDR 192
Query: 207 YGKLVGLITRGNVVRA 222
+L+GLIT ++ +A
Sbjct: 193 DNRLIGLITYKDITKA 208
>gi|456353952|dbj|BAM88397.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 242
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 14/141 (9%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T++ +A ++++ ++G PV+D KLVGVVS+ D + I G + W
Sbjct: 18 TSIVDAANIMLQRHVSGLPVVDAAGKLVGVVSEGDFIRRTEIGTGRK---------RGRW 68
Query: 152 KTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F + +G+ V ++MT +PL + E+ L + L+ + +RLPVV G
Sbjct: 69 LRFILGPGKSAADFVHEHGRKVSEVMTKSPLTITEDAALAEIVELMEKNHVKRLPVVKG- 127
Query: 208 GKLVGLITRGNVVRAALQIKR 228
++VG+++R N+++A + R
Sbjct: 128 DQVVGIVSRANLLQAVATLGR 148
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V +T++ DAA ++L+ LPVVD GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDAAGKLVGVVSEGDFIR 55
>gi|301064566|ref|ZP_07204962.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300441314|gb|EFK05683.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 149
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
D MT ++ VK T + E E L + RI G PV+DD+ L+G++ + DL+ D
Sbjct: 5 SDIMTT--EVITVKKETPLKELAEILYKNRINGVPVVDDEGLLIGIICESDLVRKDK-KL 61
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
+LF V + N +++ + + N V +L + + V E T +++ A ++ +
Sbjct: 62 HIPTVVALFDAVFYLESSKN-IEKEIKRINATTVEELFSRKVVTVDEKTPIDEIATIMTQ 120
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
K +PV+DG ++VG+I +G+V+R L
Sbjct: 121 KKVYTIPVMDG-NRMVGVIGKGDVIRTLL 148
>gi|116249833|ref|YP_765671.1| hypothetical protein RL0067 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254481|emb|CAK05555.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 222
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 9/155 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D M K + V +V A E ++ ++G PVIDD +LVG++S+ DLL +
Sbjct: 3 VKDVMITK--VVGVSPDNSVRRAAEIMLANHVSGVPVIDDAGRLVGIISEGDLLRRTEL- 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + L ++ T E ++N V D+M+ P+VV +T+L + L+
Sbjct: 60 -GREATAEL----GTSALTAEEKATAYVRSNAWRVADVMSCDPIVVEGDTSLARVSALMQ 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
E +RLPV+ G LVG+++R ++++A + +D
Sbjct: 115 EHHIKRLPVMRD-GVLVGIVSRADLLKAIVTADQD 148
>gi|212704299|ref|ZP_03312427.1| hypothetical protein DESPIG_02354 [Desulfovibrio piger ATCC 29098]
gi|212672261|gb|EEB32744.1| CBS domain protein [Desulfovibrio piger ATCC 29098]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 17/140 (12%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
AVK T++ + L E +I PV+DD ++VG++SD D + G + +
Sbjct: 13 AVKPDTSLLKCRNLLKEHQIRRLPVVDDQNRVVGIISDRD------VKGASPS------- 59
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+T +E+Q LL++ K D+MT P+ + ++E AA L+++ K+ LPVV
Sbjct: 60 -KATALEVHEMQYLLAELKAK---DIMTAKPVTIKPWDSVEQAAILMMDKKFGGLPVVSE 115
Query: 207 YGKLVGLITRGNVVRAALQI 226
KLVG+IT ++ + + I
Sbjct: 116 DNKLVGIITDQDIFKLLINI 135
>gi|291296715|ref|YP_003508113.1| hypothetical protein [Meiothermus ruber DSM 1279]
gi|290471674|gb|ADD29093.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
Length = 145
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 83/157 (52%), Gaps = 23/157 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT D V V EA + + + PV+++ +LVG+V+D DL
Sbjct: 3 VKDFMTP--DPQVVTPDVAVPEAAQIMKKGGFRRLPVVEEG-RLVGIVTDRDLK-----E 54
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ TSL S W E+ L+S+ + VG++MT P+ V + L+ AA+L+L
Sbjct: 55 AMPSDATSL-----SIW----EINYLISRLS---VGEIMTRDPISVADTLPLQAAAKLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
E K LPVV GKLVG++T +V+RA LQ R+ E
Sbjct: 103 EYKVGGLPVVH-EGKLVGIVTVTDVLRAFLQ--REAE 136
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+V D MTP P VV + + +AA+++ + +RRLPVV+ G+LVG++T
Sbjct: 2 LVKDFMTPDPQVVTPDVAVPEAAQIMKKGGFRRLPVVE-EGRLVGIVT 48
>gi|225352070|ref|ZP_03743093.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157317|gb|EEG70656.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 330
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M + D++ V + V +A+ ++EK I+G P++DD+ +VG +SD D+L +
Sbjct: 178 TVADVM--QHDVYTVASDAEVRDAVRMMLEKNISGMPIVDDERHVVGFISDSDVLRRFAQ 235
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRL-LSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+D S F EL L N V+ PA + V + N+ ++
Sbjct: 236 DNAPVSDISTLVT-GMARGEFPELSHAELLDMNVMVIAA--KPA-VTVQSDANIAQVCQM 291
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+Y+++PVV+ GKLVG++ RG + R + +
Sbjct: 292 FGYQQYKKVPVVE-QGKLVGVVNRGRLTRRSFE 323
>gi|88801611|ref|ZP_01117139.1| CBS domain protein [Polaribacter irgensii 23-P]
gi|88782269|gb|EAR13446.1| CBS domain protein [Polaribacter irgensii 23-P]
Length = 155
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 25/153 (16%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT + L K ++D +E+L+ I+G PV++D+ +L+G++S+ D + IS
Sbjct: 23 VSDYMTTR--LITFKAEDSLDHVIEKLIVHNISGGPVVNDENELIGIISETD--CIKHIS 78
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G K +N + S TN VG M + +N N+ DAA +
Sbjct: 79 EG---------------KYYN----MPSDTNN-TVGKHMVRDVDTIDKNMNIFDAAFKFI 118
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
++ RR PV + GK++G +++ +V++AAL ++
Sbjct: 119 SSRRRRFPVTES-GKVIGQLSQKDVLKAALAVR 150
>gi|260909469|ref|ZP_05916173.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
gi|260636394|gb|EEX54380.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
Length = 494
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ TV +AL + + I G PV+DDD +LVG+V++ DL
Sbjct: 105 IRKGRTVKDALAMMHDYHIGGIPVVDDDNRLVGIVTNRDL-------------------- 144
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
+ L K + ++MT LVV H+ T+L AA++L E K +LPVVD
Sbjct: 145 --------RFEHRLDKK----IDEVMTSENLVVTHQQTDLAAAAQILQENKIEKLPVVDA 192
Query: 207 YGKLVGLITRGNVVRA 222
++VGLIT ++ +A
Sbjct: 193 NNRIVGLITYKDITKA 208
>gi|394987874|ref|ZP_10380713.1| hypothetical protein SCD_00274 [Sulfuricella denitrificans skB26]
gi|393793093|dbj|GAB70352.1| hypothetical protein SCD_00274 [Sulfuricella denitrificans skB26]
Length = 215
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 27/174 (15%)
Query: 51 EVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFP 110
E A A+ G+ + R Y M++ ++ AV+ + ++ A LV RI P
Sbjct: 60 ESAARAYQGMSYQET--ERGPLYHAYQIMSR--EVTAVQAESRIENAWRTLVTGRIRQAP 115
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
V+D ++LVG+VS+ DLL + ++ G D +L++T V
Sbjct: 116 VLDSAYRLVGIVSERDLLTVLNVEDGAVRD-------------------VLART----VA 152
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
++M + ++ AR+LL+T + +PVV+ G++VG ++RG+++RA +
Sbjct: 153 EVMVSPVVSTDPIADIRRVARVLLDTGFTGVPVVNEAGEMVGFLSRGDILRAVI 206
>gi|375101298|ref|ZP_09747561.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
gi|374662030|gb|EHR61908.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
Length = 201
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 29/151 (19%)
Query: 79 MTKKEDLHAVKTTTTVDEALER----LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
M K+ + + T + D++++R L E T PV+DD ++VGVV++ D++
Sbjct: 1 MRAKDIMTSPVVTASPDDSVKRATRLLAEHGFTALPVVDDAGRVVGVVTEADVM------ 54
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV---VGDLMTPAPLVVHENTNLEDAAR 191
T + ++ + + G V VG++MTPAP + ++ D
Sbjct: 55 ---------------TGRVPHDARYRSGSSTGPVAGTVGEVMTPAPTCTQQGADVADLVG 99
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
LLE +R +PV+ G KLVG++TR ++VRA
Sbjct: 100 TLLEGHHRAVPVLAGE-KLVGIVTRRDIVRA 129
>gi|392412223|ref|YP_006448830.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390625359|gb|AFM26566.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 226
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 83/152 (54%), Gaps = 20/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MTKK + ++ T ++ A+ ++E ++ FPV+++ KLVG+V+D DL
Sbjct: 3 VKDWMTKK--VVTLEVTDSLQHAINLMMEDHVSMFPVLEEG-KLVGIVTDRDL------K 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ +D + ++Q+++ + VG +M+ P+ V N +E+AA +L+
Sbjct: 54 RASPSDMARL-----------DIQQIIYHVSRVEVGAIMSRYPITVPLNWTVEEAAEILM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
K PV+D G++ GLIT+ ++ +A + +
Sbjct: 103 TNKISGCPVIDEKGEIRGLITKSDLFKALIAL 134
>gi|302345885|ref|YP_003814238.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
ATCC 25845]
gi|302150253|gb|ADK96515.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
ATCC 25845]
Length = 494
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 33/131 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV +ALE + + I G PV+D++ LVG+V++ DL
Sbjct: 110 TVKDALEMMADYHIGGIPVVDEENHLVGIVTNRDL------------------------- 144
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+R L K ++ D+MT LV H+ T+L AA +L E K +LPVVD +LV
Sbjct: 145 ---RFERHLDK----LIDDVMTKDNLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLV 197
Query: 212 GLITRGNVVRA 222
GLIT ++ +A
Sbjct: 198 GLITYKDITKA 208
>gi|197121843|ref|YP_002133794.1| hypothetical protein AnaeK_1434 [Anaeromyxobacter sp. K]
gi|196171692|gb|ACG72665.1| CBS domain containing protein [Anaeromyxobacter sp. K]
Length = 147
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+ TVGD+MTK ++ ++V EA+ L EK I PV+ +LVG+V++ L
Sbjct: 3 DAKLTVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLF- 58
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
P +T + EL LLSKT + M PAP VH +T L +A
Sbjct: 59 ------------GYMPAKATTLDQW-ELHYLLSKTPVRAA---MNPAPHTVHPDTPLAEA 102
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
ARLL + K + VV+ G L GL+T N + A +
Sbjct: 103 ARLLHDRKLNGVLVVNAQGDLQGLLTTTNALEALIHF 139
>gi|448460309|ref|ZP_21597134.1| peptidase M50 [Halorubrum lipolyticum DSM 21995]
gi|445807050|gb|EMA57136.1| peptidase M50 [Halorubrum lipolyticum DSM 21995]
Length = 395
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 30/161 (18%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT++EDLH V T+V E + R+ E+R TG+PV+ D LVG+V+ D
Sbjct: 250 TVADVMTRREDLHVVTEDTSVAELMSRMFEERHTGYPVLHGD-DLVGMVTLEDA------ 302
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + V D+M + V + A + +
Sbjct: 303 ------------------RSIREVER-----DAYQVADVMESEVVGVGPEVDAMTALQTM 339
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
E RLPVVD +LVGLI+R +++ A I+ G S
Sbjct: 340 QENGVGRLPVVDRNDELVGLISRSDLMTAFNIIQTGGTPSV 380
>gi|316935762|ref|YP_004110744.1| hypothetical protein [Rhodopseudomonas palustris DX-1]
gi|315603476|gb|ADU46011.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
DX-1]
Length = 142
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 22/149 (14%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ + AV T+ E ++ +PV++D +++G+V+ YD L +
Sbjct: 8 TVADHMTRA--VKAVSRELTMRELEDKFEHDDFNAYPVVED-QRVIGMVTKYDFLNCFAF 64
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ T + P+ + L+++T VGD+M+ L VH +T L +L+
Sbjct: 65 -----HPTQMLPHYDD----------LMNRT----VGDIMSADFLYVHSDTKLTRVLQLM 105
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+E + R +PV+D KL G+I+R +V++A
Sbjct: 106 VEHQTRSIPVLDADRKLDGIISREDVIKA 134
>gi|220916635|ref|YP_002491939.1| hypothetical protein A2cp1_1529 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954489|gb|ACL64873.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 147
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+ TVGD+MTK ++ ++V EA+ L EK I PV+ +LVG+V++ L
Sbjct: 3 DAKLTVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLF- 58
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
P +T + EL LLSKT + M PAP VH +T L +A
Sbjct: 59 ------------GYMPAKATTLDQW-ELHYLLSKTPVRAA---MNPAPHTVHPDTPLAEA 102
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
ARLL + K + VV+ G L GL+T N + A +
Sbjct: 103 ARLLHDRKLNGVLVVNAQGDLQGLLTTTNALEALIHF 139
>gi|385675834|ref|ZP_10049762.1| CBS domain containing membrane protein [Amycolatopsis sp. ATCC
39116]
Length = 221
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 75 VGDFMTKKEDLHAVKTTTTVD--EALERLVEK-RITGFPVIDDDWKLVGVVSDYDLLALD 131
VGD MT H V + + L RL+++ +I PV+D + VGVVS+ DLLA +
Sbjct: 6 VGDLMT-----HPVVSVVPAMPFKNLVRLLDQYQIGAVPVVDGHDRRVGVVSESDLLAKE 60
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ G ++ ++ P W+ + + + + ++T MT V+ ++ + AAR
Sbjct: 61 DLRGADRPPSAFAPG--RRWRWWGKSRAMTAETA-------MTRRVRVIGQDEPVAVAAR 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L RRL VVDG GKLVG++ R +V+R L+
Sbjct: 112 RLAREHLRRLYVVDGDGKLVGVLARRDVLRLFLR 145
>gi|218781404|ref|YP_002432722.1| hypothetical protein Dalk_3566 [Desulfatibacillum alkenivorans
AK-01]
gi|218762788|gb|ACL05254.1| CBS domain containing membrane protein [Desulfatibacillum
alkenivorans AK-01]
Length = 205
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT+ D+ +V T + E + ++G PV+D D ++G++S+ D L GG
Sbjct: 63 DIMTR--DVVSVAQDTLLSETAAIMEAANVSGVPVVDGDNFIMGIISEKDFLEK---MGG 117
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+N + F V + + + K D+MT + + + + +++L E
Sbjct: 118 KKNGS--FMGV--IAECLSNRGCVAMPIREKSAKDVMTFPVITAQRSNTISELSKMLAEH 173
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ R+PVVDG G+LVG+++RG++V +
Sbjct: 174 QINRIPVVDGKGRLVGIVSRGDIVES 199
>gi|16262787|ref|NP_435580.1| hypothetical protein SMa0636 [Sinorhizobium meliloti 1021]
gi|14523419|gb|AAK64992.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 217
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 13/140 (9%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL---ALDSISGGNQNDTSLFPNVNS 149
+V +A + + + ++G PV+DDD L+GV+S+ DL+ L S + D ++ P+ +
Sbjct: 13 SVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSEASVLMADMAIDPDDRA 72
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209
N R S VGD+MT P+ + E L A L+ E +R+PVV G+
Sbjct: 73 -----NAFIRRCSWR----VGDVMTANPVTIEEEAPLARVAGLMQERGIKRIPVVRD-GE 122
Query: 210 LVGLITRGNVVRAALQIKRD 229
LVG+++R ++++A K D
Sbjct: 123 LVGIVSRADLLQAIFSTKPD 142
>gi|339301021|ref|ZP_08650145.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|417005963|ref|ZP_11944533.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
gi|319745547|gb|EFV97849.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|341576144|gb|EGS26555.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
Length = 219
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTKK L V TTV EA + L E + PV+++D +LVG+V++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + P+ +T + E+ LL+KT + D+M + V + +LEDA L++
Sbjct: 50 -GTMAEAQ--PS-KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
K LPVVD G+L G+IT +V +A L+I G+
Sbjct: 103 SRKIGVLPVVDN-GQLYGIITDRDVFKAFLEIAGYGQE 139
>gi|301064753|ref|ZP_07205133.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300441128|gb|EFK05513.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 431
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ + V D+ ++ L+ R TG PV+D + + VGVVS DL+
Sbjct: 119 VRDVMTR--EAVCVPLDEPADQVMKALLSARFTGLPVVDSENRPVGVVSQSDLI----YR 172
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G +L + L+ ++ K D+MT + + EN L A ++
Sbjct: 173 AGMPVRLALMAQSD-----HERLKTVVKGLAAKTAQDIMTGPAVTIQENDPLTRAVTAMV 227
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K +RLPVV+G G L G+++R +V + + D ER
Sbjct: 228 KNKVKRLPVVNGEGFLTGIVSRLDVFQTITRKAPDWER 265
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSI 133
V D M + D H V T V E L + + I V+D D +L+G++SD LL A
Sbjct: 279 VSDIM--RRDTHTVTPDTPVHEVLTIIDDNDIQRVAVVDSDGRLLGLISDRTLLSAFSEK 336
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVV--GDLMTPAPLVVHENTNLEDAAR 191
+ G S ++ K ++ L K V DL+T V E+T+++ A
Sbjct: 337 APGVWEVLSKLSPFSAKPKHTGNVREKLGDQPAKAVMKTDLIT-----VREDTDIDQAIA 391
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
L+ E +RLPVVD G G+I+R +++
Sbjct: 392 LMTEHGIKRLPVVDDQGMFKGMISREALLKQGF 424
>gi|337748935|ref|YP_004643097.1| hypothetical protein KNP414_04697 [Paenibacillus mucilaginosus
KNP414]
gi|336300124|gb|AEI43227.1| CBS domain-containing protein [Paenibacillus mucilaginosus KNP414]
Length = 152
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M + +++ V T +V + +E RI+G PV++ K+VG +SD D++ G
Sbjct: 6 DIMIR--NVYCVNETESVRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEYI----G 59
Query: 137 NQNDT---SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
D SLF F +R +S+ V D+ T + V +E+ A +L
Sbjct: 60 RHEDRVVGSLFFTFVFRGDEFGFDER-ISRILDLPVMDIATKKVITVQAEEPMENIAAIL 118
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + ++LP V+ +G+LVG+I+RG+V+R + +
Sbjct: 119 AQRQIKKLP-VEQHGELVGIISRGDVIRHSFK 149
>gi|146342162|ref|YP_001207210.1| hypothetical protein BRADO5312 [Bradyrhizobium sp. ORS 278]
gi|146194968|emb|CAL78993.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
Length = 242
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 14/141 (9%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T++ +A ++++ ++G PV+D KLVGVVS+ D + I G + W
Sbjct: 18 TSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEIGTGRK---------RGRW 68
Query: 152 KTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F + +G+ V ++MT +PL + E+ L + ++ + +RLPVV G
Sbjct: 69 LRFILGPGKSAADFVHEHGRKVSEVMTRSPLTITEDAALAEIVEIMEKNHVKRLPVVKG- 127
Query: 208 GKLVGLITRGNVVRAALQIKR 228
++VG+++R N+++A + R
Sbjct: 128 DQVVGIVSRANLLQAVASLGR 148
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V +T++ DAA ++L+ LPVVD GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIR 55
>gi|379721903|ref|YP_005314034.1| hypothetical protein PM3016_4103 [Paenibacillus mucilaginosus 3016]
gi|378570575|gb|AFC30885.1| CBS domain-containing protein [Paenibacillus mucilaginosus 3016]
Length = 152
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 11/152 (7%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M + +++ V T +V + +E RI+G PV++ K+VG +SD D++ G
Sbjct: 6 DIMIR--NVYCVNETDSVRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEYI----G 59
Query: 137 NQNDT---SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
D SLF F +R +S+ V D+ T + V +E+ A +L
Sbjct: 60 RHEDRVVGSLFFTFVFRGDEFGFDER-ISRILDLPVMDIATKKVITVQAEEPMENVAAIL 118
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + ++LP V+ +G+LVG+I+RG+V+R + +
Sbjct: 119 AQRQIKKLP-VEQHGELVGIISRGDVIRHSFK 149
>gi|378827333|ref|YP_005190065.1| inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
gi|365180385|emb|CCE97240.1| Inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
Length = 259
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 25/156 (16%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--- 128
T D M+KK + +V ++ A ++E RI+G PV D+ KLVG++S+ DLL
Sbjct: 41 TMLAKDIMSKK--VISVSPEYSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRA 98
Query: 129 ALDSISGGNQNDTSLFPNV---NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTN 185
L S +G Q P +W+ VGD+MT + V E+
Sbjct: 99 ELGSAAGRGQVSDRPEPEAFIKGHSWR----------------VGDVMTRPVVTVDEDVP 142
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L A ++ + +R+P V G +VG+I+R +++R
Sbjct: 143 LGRVAAIMAANEIKRIPAVRA-GAMVGIISRSDILR 177
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+M+ + V ++ AAR++LE + LPV D GKLVG+++ G+++R A
Sbjct: 46 DIMSKKVISVSPEYSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRA 98
>gi|332291925|ref|YP_004430534.1| signal transduction protein with CBS domains [Krokinobacter sp.
4H-3-7-5]
gi|332170011|gb|AEE19266.1| putative signal transduction protein with CBS domains
[Krokinobacter sp. 4H-3-7-5]
Length = 154
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 26/152 (17%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M++K L +V E + L++ +I+G PV++++ +L+G++S+ D +
Sbjct: 23 VSDYMSRK--LITFSPDQSVLEVMNNLIKHKISGGPVVNENNELLGIISEGDCMK----- 75
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
Q S + N + N KV ++T + N N+ DAA L
Sbjct: 76 ---QISESRYYN--------------MPMDNMKVSNHMVTNVD-TIDGNMNVFDAANKFL 117
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
E+K+RR P+V+ GKLVG I++ +V++AAL +
Sbjct: 118 ESKHRRFPIVEN-GKLVGQISQKDVLKAALAL 148
>gi|330823694|ref|YP_004386997.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|329309066|gb|AEB83481.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 225
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R V D MT+ ++ ++ T ++ +A + L ++++ PV+D ++VG++ D+
Sbjct: 82 RRPLTQVSDVMTR--EVSSLPATMSIQDAWQALRLEQLSQAPVVDARGQVVGLLRRSDMA 139
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ D L P+++ +TF + R ++ +++PAP V ++T+L
Sbjct: 140 SAD-----------LLPDLDGIKRTFAQAHRPITDV-------MLSPAP-TVSDDTDLRR 180
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A+ +LET LPV D G L G + R +++RA
Sbjct: 181 VAKAMLETGLSGLPVTDEAGMLQGFVARSDILRA 214
>gi|357022937|ref|ZP_09085158.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium
thermoresistibile ATCC 19527]
gi|356477271|gb|EHI10418.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium
thermoresistibile ATCC 19527]
Length = 513
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 61/133 (45%), Gaps = 36/133 (27%)
Query: 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
T VD R RI+G PV+DD+ LVG++++ D+
Sbjct: 125 TLAEVDALCARF---RISGLPVVDDEGHLVGIITNRDM---------------------- 159
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARLLLETKYRRLPVVDGYG 208
R + N K V ++MT APLV HE + E A LL K +LP+VDG G
Sbjct: 160 ---------RFEADQN-KRVAEVMTKAPLVTAHEGVSAEAALGLLRRNKIEKLPIVDGSG 209
Query: 209 KLVGLITRGNVVR 221
KL GLIT + V+
Sbjct: 210 KLTGLITVKDFVK 222
>gi|441146155|ref|ZP_20964045.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620734|gb|ELQ83759.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 242
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Query: 96 EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFN 155
E + L I+G PV+D D K++GVVS+ DL++ ++D + P +
Sbjct: 25 EVADLLARHAISGVPVVDRDDKVLGVVSETDLMS----HQAARDDDAPRPWYALR-RRAK 79
Query: 156 ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+ +K G+ GDLMT + + + +AAR + + RLPV+D G+L+G++T
Sbjct: 80 SARAARTKAGGRTAGDLMTSPAVTIGPRRTVAEAARTMAAHRVERLPVIDEEGRLMGIVT 139
Query: 216 RGNVV 220
R +++
Sbjct: 140 RSDLL 144
>gi|15789845|ref|NP_279669.1| inosine-5'-monophosphate dehydrogenase [Halobacterium sp. NRC-1]
gi|169235566|ref|YP_001688766.1| CBS/parB domain-containing protein [Halobacterium salinarum R1]
gi|10580239|gb|AAG19149.1| inosine-5'-monophosphate dehydrogenase [Halobacterium sp. NRC-1]
gi|167726632|emb|CAP13417.1| CBS/parB domain protein [Halobacterium salinarum R1]
Length = 272
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 74/160 (46%), Gaps = 39/160 (24%)
Query: 70 NG-TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
NG T VGD+MT+ D+ V TV + R+ E GFPV D + G VS DLL
Sbjct: 9 NGETPAVGDYMTR--DVATVSADDTVSDVAARISESDHNGFPVTDG-RHVEGFVSARDLL 65
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
D D LF +MT +V H ++ D
Sbjct: 66 LADP-------DELLFK--------------------------VMTEDLVVAHPEMDVTD 92
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
AAR++L + ++LPVVD G LVG+IT +V+R+ QI+R
Sbjct: 93 AARVILRSGIQKLPVVDDAGNLVGIITNADVIRS--QIER 130
>gi|409095026|ref|ZP_11215050.1| inosine 5'-monophosphate dehydrogenase [Thermococcus zilligii AN1]
Length = 485
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 35/139 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
E++ ++ TVD AL + + I G PVI+D K+VGV+S D+
Sbjct: 101 EEVISISPEETVDYALFLMEKNDIDGLPVIED-GKVVGVISKKDI--------------- 144
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
+ GK+V D+MT P+ V E+ +A L+ E + RLP
Sbjct: 145 -------------------AVKQGKLVKDVMTAEPITVPESVTTGEALNLMFEHRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVVR 221
VVDG GKLVG+IT ++ +
Sbjct: 186 VVDGNGKLVGIITMSDLAK 204
>gi|227823207|ref|YP_002827179.1| CBS domain-containing protein [Sinorhizobium fredii NGR234]
gi|227342208|gb|ACP26426.1| putative CBS domain protein [Sinorhizobium fredii NGR234]
Length = 223
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT K + + +V +A + + + ++G PV+DD +L+GV+S+ DL+ +
Sbjct: 3 VKDVMTTK--VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIRRTELC 60
Query: 135 GGN---QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G D ++ P+ + N R S VGD+MT P+ + E L A
Sbjct: 61 SGASVLMADMAIDPDDRA-----NAFVRRCSWR----VGDVMTANPVTIEEEAPLARVAG 111
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
L+ E +R+PV+ G+LVG+++R ++++A K D
Sbjct: 112 LMQEHGIKRIPVMRN-GELVGIVSRADLLQAIFSTKPD 148
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT + + + ++ AA+L+ + +PVVD G+L+G+I+ G+++R
Sbjct: 2 LVKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIR 55
>gi|156742804|ref|YP_001432933.1| hypothetical protein Rcas_2844 [Roseiflexus castenholzii DSM 13941]
gi|156234132|gb|ABU58915.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 428
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 15/170 (8%)
Query: 47 TVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRI 106
T+ EV + VG P TV D M+++ + +V+ T + +E L+++ +
Sbjct: 99 TIPVEVLKYTSRAVG------PFPAHLTVADIMSRQ--VVSVRPDTPIAVIVELLIDRAL 150
Query: 107 TGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNG 166
PV+D + ++VG+++D DLL G + +L + S + ++ L + +
Sbjct: 151 RSAPVVDAENRVVGIITDGDLLT----RGATELPLALQREL-SLAERAAAVEILAERPH- 204
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
DLMTP P+ + T L +AA ++ + +R+PVVD +LVG+++R
Sbjct: 205 -TAADLMTPDPVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSR 253
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+T D MT D + TT + EA + ++ + PV+D+ +LVG+VS YDLL+ +
Sbjct: 204 HTAADLMTP--DPVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLLSTVA 261
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ + P+ + + VGD+M V +T L +
Sbjct: 262 EGLRQRPAEPVVPSGGAP----------------QTVGDIMMTGIPTVRPDTPLAETLDH 305
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
LLET RR+ VVD + +VG+I+ G+V+R A + R G
Sbjct: 306 LLETDKRRVVVVDEHHHVVGIISDGDVLRRAAKRVRSG 343
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 16/162 (9%)
Query: 66 VPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDY 125
VP TVGD M + V+ T + E L+ L+E V+D+ +VG++SD
Sbjct: 273 VPSGGAPQTVGDIMMTG--IPTVRPDTPLAETLDHLLETDKRRVVVVDEHHHVVGIISDG 330
Query: 126 DLL--ALDSISGGNQNDTSLFPNVNSTWKTFNELQR---LLSKTNGKVVGDLMTPAPLVV 180
D+L A + G + W F R L G+ D+MT + +
Sbjct: 331 DVLRRAAKRVRSGALR-------ALAAW--FGGGARPPGLEVAAEGRTAADVMTSPVVTL 381
Query: 181 HENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + +A RL++ K +R+PVVD + VG++ R V+ A
Sbjct: 382 PADAPITEAVRLMMTHKIKRIPVVDADKRFVGMVGRAGVLAA 423
>gi|86158851|ref|YP_465636.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775362|gb|ABC82199.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 149
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
+ TVGD+MTK ++ ++V EA+ L EK I PV+ +LVG+V++ L
Sbjct: 3 DAKLTVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLFG 59
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
P +T + EL LLSKT + M PAP VH +T L +A
Sbjct: 60 Y-------------MPAKATTLDQW-ELHYLLSKTPVRAA---MNPAPHTVHPDTPLAEA 102
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
ARLL + K + VV G L GL+T N + A +
Sbjct: 103 ARLLHDRKLNGVIVVSAQGDLEGLLTTTNALEALIHF 139
>gi|453054043|gb|EMF01499.1| hypothetical protein H340_05666 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 210
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKR-ITGFPVIDDDWKLVGVVSDYDLLAL 130
T VG+ MT A T E L RL+ +R ++G PV+D D K+VGVVS+ DL
Sbjct: 3 TPIVGEIMTSPV---ARARPGTSFEGLVRLLRRRGVSGVPVLDPDDKVVGVVSEKDLAR- 58
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ G +LM+ L VH DAA
Sbjct: 59 -------------------------------HRERGGTAAELMSSPALTVHPEQRAADAA 87
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
R++ + RLPVVD +L+G++TRG+++R L+
Sbjct: 88 RVMDRHRVNRLPVVDEEDRLIGIVTRGDLLRVFLR 122
>gi|323343305|ref|ZP_08083532.1| inosine-5'-monophosphate dehydrogenase [Prevotella oralis ATCC
33269]
gi|323095124|gb|EFZ37698.1| inosine-5'-monophosphate dehydrogenase [Prevotella oralis ATCC
33269]
Length = 511
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ +TV +AL + + I G PV+D+D LVG+V++ DL
Sbjct: 122 IRRGSTVKDALGIMSDYHIGGIPVVDEDNHLVGIVTNRDL-------------------- 161
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDG 206
+R L K + D+MT LV H+ T+L AA++L + K +LPVVDG
Sbjct: 162 --------RFERRLDKK----IDDVMTRENLVTTHQQTDLIAAAQILQKNKIEKLPVVDG 209
Query: 207 YGKLVGLITRGNVVRA 222
+LVGLIT ++ +A
Sbjct: 210 NNRLVGLITYKDITKA 225
>gi|302556797|ref|ZP_07309139.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
gi|302474415|gb|EFL37508.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
Length = 225
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + AV E + + ++R++ PV++ + ++VGVVS+ DLL +
Sbjct: 6 HIVSDVMTRT--VVAVGRDAPFKEIVRTMEQRRVSAMPVLEGEGRVVGVVSEADLLPKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+S E +R + + GDLM+ + VH + L AA
Sbjct: 64 FR-------------DSGPTPVEERRRPSDVVRAGAVTAGDLMSRPAVTVHSDATLAQAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
R++ +RLPVVD L G+++R ++++ L+ D E
Sbjct: 111 RIMGVRHVKRLPVVDESAMLQGIVSRADLLKVFLRPDEDIE 151
>gi|27381185|ref|NP_772714.1| hypothetical protein blr6074 [Bradyrhizobium japonicum USDA 110]
gi|27354352|dbj|BAC51339.1| blr6074 [Bradyrhizobium japonicum USDA 110]
Length = 242
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T++ EA ++++ ++G V+DD KLVGVVS+ D + I G +
Sbjct: 13 SVTPDTSIVEAANIMLKRHVSGLTVVDDTGKLVGVVSEGDFIRRSEIGTGRK-------- 64
Query: 147 VNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
W F + +G+ V ++MT +P+ + E+T L + L+ +RLP
Sbjct: 65 -RGRWLRFILGPGKSASDFVHEHGRKVSEVMTASPVTITEDTALAEIVDLMERNNVKRLP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKRD 229
VV G +VG+++R N+++A + R+
Sbjct: 124 VVRG-DMVVGIVSRANLLQAVAGLARE 149
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + + V +T++ +AA ++L+ L VVD GKLVG+++ G+ +R
Sbjct: 6 IMTRSVISVTPDTSIVEAANIMLKRHVSGLTVVDDTGKLVGVVSEGDFIR 55
>gi|357633243|ref|ZP_09131121.1| protein of unknown function DUF190 [Desulfovibrio sp. FW1012B]
gi|357581797|gb|EHJ47130.1| protein of unknown function DUF190 [Desulfovibrio sp. FW1012B]
Length = 408
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ +V T + + ++ L+ + + PVI ++ K+ GVV+ DLLA GG SL
Sbjct: 119 DVASVSPTDPLPKVVDLLLARGVKAVPVIGENGKVAGVVTGGDLLA----RGGMDTRLSL 174
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
N+ E R+ G D+MT + + E L +AA+++ +RLPV
Sbjct: 175 -QNILPDDVRAGERARM----AGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRLPV 229
Query: 204 VDGYGKLVGLITRGNVVRAA 223
VD G+L+G+++R +++R+A
Sbjct: 230 VDEAGELIGIVSRADILRSA 249
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 73 YTVGDFMTKKE----DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+T G F ++ D+ T + E + RLV + VID D K+ G+V D DLL
Sbjct: 262 FTAGLFQQARDVMFTDVPTAAPDTPLPEVVARLVASPLRRVVVIDADRKVRGIVLDGDLL 321
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
G + L + S + E + + + ++M V E+T L D
Sbjct: 322 G----RCGPERKPGLLKALFSFGR--EEAACPMGRAS-----EVMQANVYTVSEDTPLMD 370
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ +L T+ +RL VVD GKL+G++ R +++R
Sbjct: 371 VLQRMLTTRAKRLVVVDDEGKLLGMVDRESLLR 403
>gi|239621972|ref|ZP_04665003.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239515163|gb|EEQ55030.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 683
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++G PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSGLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|11498858|ref|NP_070087.1| inosine monophosphate dehydrogenase [Archaeoglobus fulgidus DSM
4304]
gi|2649320|gb|AAB89984.1| inosine monophosphate dehydrogenase, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 259
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 35/151 (23%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MTK +++ +K TV +A+E + + FPV+DD+ ++VG +S DLL
Sbjct: 5 VKDYMTK--NVYTLKPDNTVKDAIELVRKTGHDSFPVVDDNMRVVGYISAVDLL------ 56
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
K+ + D+M+ V + +L DAAR++
Sbjct: 57 ---------------------------DKSPETKIRDIMSRELYVARDFMDLRDAARVMF 89
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
T + +LPVVD +LVG+I+ +V+R+ ++
Sbjct: 90 RTGHSKLPVVDEDNRLVGIISNADVIRSQIE 120
>gi|218887932|ref|YP_002437253.1| hypothetical protein DvMF_2848 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758886|gb|ACL09785.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 223
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ ++MTK D+ V T++ +A + L E RI PV+D + +L+G+VSD D+
Sbjct: 3 IREWMTK--DVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDI------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ V D+MT P V + +E A ++
Sbjct: 54 ------KEASPSKATTLD-MHELYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMI 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
E + LPV+D GKLVG+I+ +V + + I
Sbjct: 104 EKRIGGLPVIDDAGKLVGIISDSDVFKVLITI 135
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSI 133
V D MT+ D V+ TV+ ++EKRI G PVIDD KLVG++SD D+ L +I
Sbjct: 78 VKDIMTR--DPFTVRADDTVETVALNMIEKRIGGLPVIDDAGKLVGIISDSDVFKVLITI 135
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDL 172
+G + +T T + L + N +++ L
Sbjct: 136 TGVRHGGVQFAFELENTPGTLKPIVDTLREHNARIISIL 174
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ + MT + V +T++ A+++L E + RRLPVVD G+L+G+++ ++ A+
Sbjct: 2 LIREWMTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEAS 57
>gi|334563325|ref|ZP_08516316.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium bovis DSM
20582]
Length = 493
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 33/124 (26%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ E E RI+G PV+D D LVG+ ++ D+
Sbjct: 102 TIREVDELCARYRISGLPVVDGDGVLVGICTNRDM------------------------- 136
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA-RLLLETKYRRLPVVDGYGKLV 211
++ S+ V D+MTP PLVV + DAA RLL E K +LP+VDG G+L
Sbjct: 137 ---RFEQDFSRQ----VRDVMTPMPLVVAQEGVSADAALRLLSENKVEKLPIVDGGGRLT 189
Query: 212 GLIT 215
GLIT
Sbjct: 190 GLIT 193
>gi|374853646|dbj|BAL56549.1| inosine monophosphate dehydrogenase [uncultured Bacteroidetes
bacterium]
Length = 486
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 33/129 (25%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
V EA + + + RI G P+++ D +L G++++ D I +DT
Sbjct: 107 VREAFQLMADHRIGGIPIVEKDRRLGGILTNRD------IRFAVPDDTP----------- 149
Query: 154 FNELQRLLSKTNGKVVGDLMTPAPLVVH-ENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
V MTPAPLVV E T L++A +L + K +LP+VDG G+LVG
Sbjct: 150 ---------------VSAYMTPAPLVVAPEGTGLDEAEAILRKHKVEKLPIVDGAGRLVG 194
Query: 213 LITRGNVVR 221
LIT +++R
Sbjct: 195 LITYKDILR 203
>gi|365885833|ref|ZP_09424817.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285444|emb|CCD97348.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 242
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T + +A ++++ ++G PV+D KLVGVVS+ D + I G + W
Sbjct: 18 TPIVDAANIMLQRHVSGLPVVDATGKLVGVVSEGDFIRRTEIGTGRK---------RGRW 68
Query: 152 KTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F + +G+ V ++MT +PL + E+ L + ++ + +RLPVV G
Sbjct: 69 LRFILGPGKSAADFVHEHGRKVAEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVKGE 128
Query: 208 GKLVGLITRGNVVRAALQIKR 228
++VG+++R N+++A + R
Sbjct: 129 -QVVGIVSRANLLQAVASLGR 148
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V +T + DAA ++L+ LPVVD GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTPIVDAANIMLQRHVSGLPVVDATGKLVGVVSEGDFIR 55
>gi|86748490|ref|YP_484986.1| signal-transduction protein [Rhodopseudomonas palustris HaA2]
gi|86571518|gb|ABD06075.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris HaA2]
Length = 243
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS----LFPNV 147
++ +A ++E ++G PV+D +L+G++S+ D + + G Q S L
Sbjct: 18 ASIVDAANAMLEHHVSGLPVVDGGGRLIGIISEGDFIRRAEL--GTQRKRSRWLRLLLGP 75
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ F +G+ VG++MT P + E+T++E R + + +RLPV+ G
Sbjct: 76 GTCAADF-------VHEHGRKVGEVMTHHPHTISEDTSIEAIVRTMEKHHVKRLPVMRG- 127
Query: 208 GKLVGLITRGNVVRAALQIKRD 229
+LVG++TR N++RA + R+
Sbjct: 128 DQLVGIVTRKNLLRAVANLARE 149
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+MT + + ++ DAA +LE LPVVDG G+L+G+I+ G+ +R A
Sbjct: 6 IMTANLVTIGPEASIVDAANAMLEHHVSGLPVVDGGGRLIGIISEGDFIRRA 57
>gi|85818625|gb|EAQ39785.1| CBS domain protein [Dokdonia donghaensis MED134]
Length = 154
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 26/152 (17%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M++K L +V E + L++ +I+G PV+++ +L+G++S+ D +
Sbjct: 23 VSDYMSRK--LITFSPDQSVLEVMNSLIKHKISGGPVVNEQNELLGIISEGDCMK----- 75
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
Q S + N + N KV +++ + N N+ DAA L
Sbjct: 76 ---QISESRYYN--------------MPMDNMKVSNHMVSNVD-TIDGNMNVFDAANKFL 117
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
E+K+RR P+V+ GKLVG I++ +V++AAL++
Sbjct: 118 ESKHRRFPIVEN-GKLVGQISQKDVLKAALEL 148
>gi|407974975|ref|ZP_11155882.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
gi|407429542|gb|EKF42219.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
Length = 216
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT+ D+ + V A+ ++E+ ++G PV D D KLVG++++ DL++ I
Sbjct: 5 DIMTR--DVATISVDAHVRHAVSVMLERGVSGLPVTDSDGKLVGIITEGDLMSRKEIG-- 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
SL + N+L+ + N VGD+M+P + V + T+L ++L
Sbjct: 61 ----RSLLDRQDHPMTDENDLKNYI-HCNSWRVGDVMSPEVVTVADTTSLATVTEMMLSR 115
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV ++G+++R ++++A
Sbjct: 116 NIKRIPVTSDRA-VIGIVSRRDLLKA 140
>gi|68536813|ref|YP_251518.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium jeikeium
K411]
gi|68264412|emb|CAI37900.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium jeikeium
K411]
Length = 516
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 33/124 (26%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ E + RI+G PV+DD+ LVG++++ D+ +
Sbjct: 124 TIQEVDDLCARYRISGLPVVDDEGVLVGILTNRDM------------------------R 159
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
++ R +S+ MTP PLVV E + E A LL E K +LP+VDG GKL
Sbjct: 160 FESDFSRKVSEA--------MTPMPLVVAQEGVSAEAALSLLSENKVEKLPIVDGAGKLT 211
Query: 212 GLIT 215
GLIT
Sbjct: 212 GLIT 215
>gi|406573473|ref|ZP_11049223.1| inosine-5'-monophosphate dehydrogenase [Janibacter hoylei PVAS-1]
gi|404557069|gb|EKA62521.1| inosine-5'-monophosphate dehydrogenase [Janibacter hoylei PVAS-1]
Length = 515
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 17 ANGVINSVPHLQLPITVATPSHLSKRLRFFTVSREVKAFA-HNGVGITN-SVPPRNGTYT 74
A G +++ L I++ TP +S + T SR A A G+G+ + ++ + Y
Sbjct: 42 APGDLDTTTRLTREISIRTPL-ISAAMDTVTESRMAIAMARQGGIGVLHRNLSIEDQAYQ 100
Query: 75 VGDFMTKKE-----DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
V D + + + + + T+D+ +R E R++G PV+D D L+G++++ DL
Sbjct: 101 V-DLVKRTQTGMITNPVVIGPEATLDDLDQRCGEYRVSGLPVVDGDNVLIGIITNRDLR- 158
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE-NTNLED 188
F V + W T +V D+MTP PL+ + ED
Sbjct: 159 --------------FTPV-AEWST-------------TLVRDVMTPMPLITAPVGISHED 190
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A LL + K RLP+VD GKL GLIT + V++
Sbjct: 191 ATLLLRQHKRERLPIVDDAGKLAGLITVKDFVKS 224
>gi|313127605|ref|YP_004037875.1| zn-dependent protease [Halogeometricum borinquense DSM 11551]
gi|448285375|ref|ZP_21476619.1| zn-dependent protease [Halogeometricum borinquense DSM 11551]
gi|312293970|gb|ADQ68430.1| Zn-dependent protease [Halogeometricum borinquense DSM 11551]
gi|445576945|gb|ELY31392.1| zn-dependent protease [Halogeometricum borinquense DSM 11551]
Length = 391
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 30/161 (18%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT +E L V T++ E L+R+ +R TG+PV+ + +LVG+V+
Sbjct: 248 TVRDVMTPREKLDVVDIRTSISELLDRMFYERHTGYPVVQNG-RLVGMVT---------- 296
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
ND +T +E++R + +V D+M+ + + + DA +
Sbjct: 297 ----LNDA----------RTVDEVER-----DAYIVKDVMSGELTTISPSADAMDAITTM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
+ RLPVVD G+LVGLI+R ++V A I+ G ++
Sbjct: 338 QQNGVGRLPVVDDEGELVGLISRSDLVTALNIIQSRGPSTS 378
>gi|365891727|ref|ZP_09430113.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365332295|emb|CCE02644.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 242
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T++ +A ++++ I+G PV+D KLVGVVS+ D + I G + W
Sbjct: 18 TSIVDAANIMLQRHISGLPVVDASGKLVGVVSEGDFIRRTEIGTGRK---------RGRW 68
Query: 152 KTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F + +G+ V ++MT +PL + ++ L + ++ +RLPVV G
Sbjct: 69 LRFILGPGKSAADFVHEHGRKVAEVMTKSPLTITQDAALAEIVEIMERNHVKRLPVVKG- 127
Query: 208 GKLVGLITRGNVVRAALQIKR 228
++VG+++R N+++A + R
Sbjct: 128 DQVVGIVSRSNLLQAVASLGR 148
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V +T++ DAA ++L+ LPVVD GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPDTSIVDAANIMLQRHISGLPVVDASGKLVGVVSEGDFIR 55
>gi|27379757|ref|NP_771286.1| hypothetical protein blr4646 [Bradyrhizobium japonicum USDA 110]
gi|27352910|dbj|BAC49911.1| blr4646 [Bradyrhizobium japonicum USDA 110]
Length = 228
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
TV + + L+E+RI+ PV+D D K++G+VS+ DLL G + S + + +
Sbjct: 18 ATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLL--HRAESGTERSPSWWLRLLTG- 74
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+L K++ V D+MT T L + A LL E + +R+P+V+ G+LV
Sbjct: 75 --DAQLATDYVKSHSIKVQDVMTQEVATAAPETPLHEIAMLLEERQIKRVPIVNKEGQLV 132
Query: 212 GLITRGNVVR 221
G+++R N+++
Sbjct: 133 GIVSRANLLQ 142
>gi|260579168|ref|ZP_05847059.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium jeikeium
ATCC 43734]
gi|258602714|gb|EEW16000.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium jeikeium
ATCC 43734]
Length = 511
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 59/124 (47%), Gaps = 33/124 (26%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ E + RI+G PV+DD+ LVG++++ D+ +
Sbjct: 119 TIQEVDDLCARYRISGLPVVDDEGVLVGILTNRDM------------------------R 154
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
++ R +S+ MTP PLVV E + E A LL E K +LP+VDG GKL
Sbjct: 155 FESDFSRKVSEA--------MTPMPLVVAQEGVSAEAALSLLSENKVEKLPIVDGAGKLT 206
Query: 212 GLIT 215
GLIT
Sbjct: 207 GLIT 210
>gi|441516923|ref|ZP_20998663.1| inosine-5'-monophosphate dehydrogenase [Gordonia hirsuta DSM 44140
= NBRC 16056]
gi|441456064|dbj|GAC56624.1| inosine-5'-monophosphate dehydrogenase [Gordonia hirsuta DSM 44140
= NBRC 16056]
Length = 503
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 36/133 (27%)
Query: 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
T VD R RI+G PV+DDD LVG++S+ D+
Sbjct: 115 TLAEVDAMCGRF---RISGLPVVDDDNNLVGIISNRDM---------------------- 149
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARLLLETKYRRLPVVDGYG 208
F Q + V ++MTPAPL+ E + E A LL K +LP+VDG G
Sbjct: 150 ---RFEHDQS-------RRVAEVMTPAPLITAQEGVSAEAALGLLRRHKVEKLPIVDGNG 199
Query: 209 KLVGLITRGNVVR 221
KL GLIT + V+
Sbjct: 200 KLTGLITVKDFVK 212
>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
15579]
gi|187774141|gb|EDU37943.1| CBS domain protein [Clostridium sporogenes ATCC 15579]
Length = 144
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 31/145 (21%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT +++ V +V++A + E + P+ +++ K+VGV++D D+ AL S++
Sbjct: 9 VMDVMT--QNVATVNRNDSVEKAARLMSEHNVGSIPICENN-KVVGVITDRDI-ALRSVA 64
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G+ N+ VGD+MT P+V +++ ++ DAAR++
Sbjct: 65 NGSDNNIK--------------------------VGDIMTSNPVVANKDMDIHDAARIMS 98
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNV 219
E + RRLPV D +VG+++ G++
Sbjct: 99 ERQIRRLPVEDNK-NIVGIVSLGDI 122
>gi|418017201|ref|ZP_12656760.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
gi|345527894|gb|EGX31202.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
Length = 219
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV A + + +K + PVI+ D KLVG+V++
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMAEAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|288960546|ref|YP_003450886.1| hypothetical protein AZL_a08110 [Azospirillum sp. B510]
gi|288912854|dbj|BAI74342.1| hypothetical protein AZL_a08110 [Azospirillum sp. B510]
Length = 233
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT + + + T+ EA +++ I+G PV+D K+VG++S+ DL L + G
Sbjct: 5 DLMTPR--VITIGPEETIAEAARKMLANNISGMPVVDAAGKVVGIISEGDL--LRRVELG 60
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ S + + S E K++ + V D+MT + V EN ++ R++
Sbjct: 61 TERHRSWWLGLVSGGTVPAE---DFIKSHARRVADVMTSHVVTVDENATPDEVVRVMETR 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +R+PVV G LVG+++R N++RA
Sbjct: 118 RIKRVPVVS-RGALVGIVSRANLLRA 142
>gi|92117469|ref|YP_577198.1| hypothetical protein Nham_1933 [Nitrobacter hamburgensis X14]
gi|91800363|gb|ABE62738.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
X14]
Length = 228
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
TV + + ++ +RI+ P++D KLVG+V++ DL+ I G + S + ++ S
Sbjct: 18 ATVQDVAKTMIARRISAVPIVDKAGKLVGIVTEADLI--HRIEVGTERPYSWWLHMLSGD 75
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+T E K++ + + D+MT T L D A L +R+P+V+ G L+
Sbjct: 76 RTMAEG---YVKSHARKITDIMTREVKTADPETPLIDIAELFETNGIKRVPIVNQAGDLI 132
Query: 212 GLITRGNVVRA 222
G+++R N+++A
Sbjct: 133 GIVSRANIIQA 143
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+M + E+ ++D A+ ++ + +P+VD GKLVG++T +++
Sbjct: 5 DVMVSPVIAAGEDATVQDVAKTMIARRISAVPIVDKAGKLVGIVTEADLI 54
>gi|76801961|ref|YP_326969.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
gi|76557826|emb|CAI49410.1| CBS domain protein [Natronomonas pharaonis DSM 2160]
Length = 167
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT +++ V V + L RL GFPV++D LVG+V+ DL+ L S
Sbjct: 5 DIMT--DEVETVAPDDDVGDVLTRLARANFNGFPVVEDGL-LVGIVTQGDLVDLFQPSDR 61
Query: 137 NQNDTSLFP--------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
FP V+ +W F+ L R ++K G+ V ++MT + V + +L D
Sbjct: 62 TLWIPVGFPPFLESLTYGVDLSWDEFD-LGRDMAKNAGRPVSEVMTEDVVTVGPDADL-D 119
Query: 189 AARLLLETKYR---RLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
A LL + R RLPVVDG G ++G+I R +++ AAL+ RD +T
Sbjct: 120 AVLALLADRDRDINRLPVVDGAGVVLGIIAREDLL-AALKAVRDAGDAT 167
>gi|421451733|ref|ZP_15901094.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
gi|400182164|gb|EJO16426.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
Length = 219
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV A + + +K + PVI+ D KLVG+V++
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMAEAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|377810706|ref|YP_005043146.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357940067|gb|AET93623.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 227
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV A +V I+G PV+D+ KL+G++++ DL+ I G ++ V ST
Sbjct: 19 TVRHAAGTMVFAGISGMPVVDETGKLLGMITEGDLMHRAEIGTGVKHRAWWLDMVAST-- 76
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
+EL K + K V DLMT V E + D A LL + +R+PV+ GK+VG
Sbjct: 77 --SELASQYVKEHAKTVKDLMTTDITTVTETCPVGDIAELLERRRIKRVPVMRD-GKVVG 133
Query: 213 LITRGNVVRA 222
+++R N++RA
Sbjct: 134 IVSRSNLIRA 143
>gi|336476762|ref|YP_004615903.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
gi|335930143|gb|AEH60684.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
Length = 154
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 6/133 (4%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG-GNQNDTSLFPNVNSTWK 152
+ + + L + I+G PV++ + KL+G++S+ DLL L I G S F + +
Sbjct: 20 ISDVAQLLRKNEISGMPVVESE-KLIGLISELDLLQLLEIPKHGTYWLPSPFEVIEIPIR 78
Query: 153 ---TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209
++ E +R+L+ K V ++M V ++E+A+ ++++ K RLPVV GK
Sbjct: 79 ELISWEEAKRMLTNIGTKPVKEIMRTKIYTVSPEDSIEEASTIMIKNKINRLPVV-SEGK 137
Query: 210 LVGLITRGNVVRA 222
LVG++TRG++++
Sbjct: 138 LVGIVTRGDIIKG 150
>gi|427702070|ref|YP_007045292.1| contains C-terminal CBS domains [Cyanobium gracile PCC 6307]
gi|427345238|gb|AFY27951.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cyanobium gracile PCC 6307]
Length = 155
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V TTT + EA++ + + I+G PV+D+ LVG +S+ DL+ +S G + + +
Sbjct: 17 SVTTTTPLQEAVQLMSDHHISGLPVLDELGALVGELSEQDLMVRES--GFDAGPYVMLLD 74
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ + + + + G VGD+M P T L AARLL + +RL V+D
Sbjct: 75 AVIYLRNPLDWDKQVHQVLGSTVGDVMGSKPHSCPAATTLPAAARLLHDRGTQRLFVLDD 134
Query: 207 YGKLVGLITRGNVVRA 222
LVG++TRG+VVRA
Sbjct: 135 QQALVGVLTRGDVVRA 150
>gi|448503834|ref|ZP_21613463.1| peptidase M50 [Halorubrum coriense DSM 10284]
gi|445692035|gb|ELZ44218.1| peptidase M50 [Halorubrum coriense DSM 10284]
Length = 394
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT +E LH V T+V + + R+ E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDVMTPREQLHTVTEDTSVADLMSRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + + + DL+ P + + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDEVMATDLVAVDP-----SADALTALQTM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVV G G+LVGLI+R +++ A I+ G
Sbjct: 339 QEHGVGRLPVVGGEGELVGLISRSDLMTAFNIIQTGG 375
>gi|315655202|ref|ZP_07908103.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
gi|315490457|gb|EFU80081.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
Length = 511
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 30/130 (23%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+++ E + R++G PV+ DD++L+G++++ DL P + W
Sbjct: 119 TIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDL--------------RFVPT--AQWG 162
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
T K V D MTP PL+ + E+A +LL E + +LP++D GKL
Sbjct: 163 T-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDENGKLT 209
Query: 212 GLITRGNVVR 221
GLIT + V+
Sbjct: 210 GLITVKDFVK 219
>gi|167584761|ref|ZP_02377149.1| hypothetical protein BuboB_05471 [Burkholderia ubonensis Bu]
Length = 230
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ +A V+ I+G PV+D ++VG+VS DLL G+ W
Sbjct: 19 TIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLLHRAENGTGHGK--------RPWWL 70
Query: 153 TF-----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F E K +G++VGD+M+ + + E+ L+ A L+ +R+PV+
Sbjct: 71 EFLLSSPREQAARYVKEHGRLVGDVMSNQVISISEDMPLDQIADLMERRHLKRVPVLT-E 129
Query: 208 GKLVGLITRGNVVRAALQI 226
GKLVG+++R N++RA I
Sbjct: 130 GKLVGIVSRSNLIRALASI 148
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+MTP+ + + + DAARL ++ +PVVD G++VG++++G+++ A
Sbjct: 5 DIMTPSVVTATPDMTIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLLHRA 57
>gi|448490531|ref|ZP_21607989.1| CBS domain containing membrane protein [Halorubrum californiensis
DSM 19288]
gi|445693649|gb|ELZ45791.1| CBS domain containing membrane protein [Halorubrum californiensis
DSM 19288]
Length = 166
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T T D M + D+ V V + +R +GFPV+DDD ++VG++++ DL+ L
Sbjct: 2 TLTARDLM--ESDVKTVSPDDDVADVFKRFARYEFSGFPVVDDDEQVVGIITESDLVDL- 58
Query: 132 SISGGNQNDTSLFP------------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV 179
+++T P V W + L + + + V D+M+
Sbjct: 59 ---FEPEDETLWIPIGLPPFVDTLSYQVKRPWADLD-LGVDMIRNADRAVSDVMSADVAT 114
Query: 180 VHENTNLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
V + +++D LL+ + R+PVVD G++VG+I R +V+RA
Sbjct: 115 VTPDASVDDVLDLLVGDDPDINRVPVVDDEGRIVGIIARQDVIRA 159
>gi|304389635|ref|ZP_07371597.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327188|gb|EFL94424.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 511
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 30/130 (23%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+++ E + R++G PV+ DD++L+G++++ DL P + W
Sbjct: 119 TIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDL--------------RFVPT--AQWG 162
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
T K V D MTP PL+ + E+A +LL E + +LP++D GKL
Sbjct: 163 T-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDENGKLT 209
Query: 212 GLITRGNVVR 221
GLIT + V+
Sbjct: 210 GLITVKDFVK 219
>gi|298346656|ref|YP_003719343.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315656882|ref|ZP_07909769.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236717|gb|ADI67849.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315492837|gb|EFU82441.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 511
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 30/130 (23%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+++ E + R++G PV+ DD++L+G++++ DL P + W
Sbjct: 119 TIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDL--------------RFVPT--AQWG 162
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
T K V D MTP PL+ + E+A +LL E + +LP++D GKL
Sbjct: 163 T-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDENGKLT 209
Query: 212 GLITRGNVVR 221
GLIT + V+
Sbjct: 210 GLITVKDFVK 219
>gi|429199449|ref|ZP_19191201.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428664772|gb|EKX64043.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 224
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ D+ + E ++ L E +T PV+D+ +GVVS+ DLL
Sbjct: 5 TVADLMTR--DVVRARRDMPFKEIVKLLAENDVTAVPVVDELDHPMGVVSEADLL----- 57
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ T + P+ + E +R +K G +LM+ + + +AARL+
Sbjct: 58 ---RKSSTQVDPSGLTPVPRLEEWER--AKAEGARAEELMSAPAVCARPEWTVVEAARLM 112
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+RLPVVD +L G+++RG+++R L+
Sbjct: 113 AAHNVKRLPVVDEADRLQGIVSRGDLLRVFLR 144
>gi|374984112|ref|YP_004959607.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
gi|297154764|gb|ADI04476.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
Length = 224
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVG+ MT+ ++ E +E L E +T PV+D +GVVS+ DLL
Sbjct: 5 TVGELMTR--NVVRAPRELPFKEIVELLAENDVTAVPVVDGSGHPIGVVSEADLL---RK 59
Query: 134 SGGNQNDTSLFPNVN-STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
S G + + P + W+ +KT G +LM+ + ++ +AARL
Sbjct: 60 SSGQADPSGRVPIPHLEAWER--------AKTEGTRAEELMSAPAVCARPEWSVVEAARL 111
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAAL--------QIKRDGERST 234
+ +RLPVVD +L+G+I+R +++R L +I+RD R T
Sbjct: 112 MAVQGVKRLPVVDETDRLLGIISRADLLRIFLRHDDAIREEIERDVLRRT 161
>gi|325300047|ref|YP_004259964.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
gi|324319600|gb|ADY37491.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
Length = 491
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 31/135 (22%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+K +TV +AL + E +I G PV+DD+ LVG+V++ DL + D S
Sbjct: 104 IKRGSTVKDALGIMAEYKIGGIPVVDDENYLVGIVTNRDLRF--------ERDMS----- 150
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ +++K N ++T AP T++E A+ +L K +LPVVD
Sbjct: 151 -------KHIDEVMTKEN------IVTTAP-----GTDMETASEILQRNKIEKLPVVDEN 192
Query: 208 GKLVGLITRGNVVRA 222
GKL+GLIT ++ +A
Sbjct: 193 GKLIGLITYKDITKA 207
>gi|154249344|ref|YP_001410169.1| signal transduction protein [Fervidobacterium nodosum Rt17-B1]
gi|154153280|gb|ABS60512.1| putative signal transduction protein with CBS domains
[Fervidobacterium nodosum Rt17-B1]
Length = 309
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 31/163 (19%)
Query: 60 VGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLV 119
V I V V +FM + D+ VK TV + E L KRI+G PV+DDD +V
Sbjct: 2 VEILEKVQKVFANIKVEEFMNR--DVIYVKPDRTVAQVKEILRLKRISGVPVVDDDGNVV 59
Query: 120 GVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV 179
G++S D++ S+ G +L V+ MT +
Sbjct: 60 GIISIEDIIK--SLENG-----TLHEKVDKH----------------------MTARVIC 90
Query: 180 VHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+H++ L++ + KY R PVVD GKLVG++T+ +++ A
Sbjct: 91 LHKDMTLQEVIKQFERYKYGRFPVVDDDGKLVGIVTKNDILAA 133
>gi|296284630|ref|ZP_06862628.1| CBS [Citromicrobium bathyomarinum JL354]
Length = 121
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 27/125 (21%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
+V+ PV+DD LVGVV+D D+ A ++ GN +D QR
Sbjct: 1 MVDNDCGEIPVVDDSGALVGVVTDRDI-ACRCVAKGNSSD-----------------QR- 41
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
V ++MT +P+ V + ++++ + + + RRLPV+D GK G++ + ++
Sbjct: 42 --------VEEVMTSSPVTVTADASVDECCTKMEDNQVRRLPVIDDEGKCCGIVAQADIA 93
Query: 221 RAALQ 225
R+A +
Sbjct: 94 RSAAE 98
>gi|124023450|ref|YP_001017757.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
gi|123963736|gb|ABM78492.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
Length = 156
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+ + +V T++ EA++ + + I+G PV++DD LVG +++ DL+ +S
Sbjct: 6 TVKDVMSTP--VLSVVPATSLQEAVQLMTDHHISGLPVVNDDGTLVGELTEQDLMVRES- 62
Query: 134 SGGNQNDTSLFPNVNSTWKTFNEL--QRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G + L ++S N L + + + G V DLM +E L AA
Sbjct: 63 -GVDAGPYVLL--LDSVIYLRNPLNWDKQVHQVLGTSVNDLMRSDTHTCNEALPLPRAAA 119
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+L + +RL V++ KLVG+ITRG+VVRA
Sbjct: 120 MLHDRSTQRLFVINDQRKLVGVITRGDVVRA 150
>gi|300787350|ref|YP_003767641.1| hypothetical protein AMED_5479 [Amycolatopsis mediterranei U32]
gi|384150704|ref|YP_005533520.1| hypothetical protein RAM_27930 [Amycolatopsis mediterranei S699]
gi|399539233|ref|YP_006551895.1| hypothetical protein AMES_5414 [Amycolatopsis mediterranei S699]
gi|299796864|gb|ADJ47239.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340528858|gb|AEK44063.1| hypothetical protein RAM_27930 [Amycolatopsis mediterranei S699]
gi|398320003|gb|AFO78950.1| hypothetical protein AMES_5414 [Amycolatopsis mediterranei S699]
Length = 203
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 22/127 (17%)
Query: 107 TGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNG 166
T PV+DDD +L+G+V++ DL+ P +E + + G
Sbjct: 33 TALPVVDDDDRLIGIVTEADLI------------RGRIPVDPRHAHEHHE-----AASAG 75
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA---- 222
K VGDLMT + T++ D + L++ + R +P+VDG +VG++TRG+VVR
Sbjct: 76 KTVGDLMTTPVTAMSTGTDVADLCQALVDARIRAMPIVDG-SAVVGIVTRGDVVRVLARE 134
Query: 223 ALQIKRD 229
++I RD
Sbjct: 135 DVEIARD 141
>gi|385209203|ref|ZP_10036071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385181541|gb|EIF30817.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 229
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V TV E V+ I+G PV+D L G++S+ DLL I + +S
Sbjct: 13 SVTPDMTVREVARIFVDNGISGAPVLDPQGHLAGMISEGDLLRRTEIGTDERKPSSWL-- 70
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
W +E + + KT+ V D+MTP + V +T L + A +L + +R+PV
Sbjct: 71 --DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVTQA 127
Query: 207 YGKLVGLITRGNVVRA 222
G++VG+++R N+V+A
Sbjct: 128 -GRVVGIVSRANLVQA 142
>gi|167753424|ref|ZP_02425551.1| hypothetical protein ALIPUT_01698 [Alistipes putredinis DSM 17216]
gi|167658049|gb|EDS02179.1| inosine-5'-monophosphate dehydrogenase [Alistipes putredinis DSM
17216]
Length = 490
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 32/129 (24%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV +AL + E +I G PV+ D L+G+V++ DL
Sbjct: 109 TVGDALALMKENKIGGIPVVAPDQHLIGIVTNRDL------------------------- 143
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
QR +++ + ++MT LV N++L+ AA +LL K +LPVVD GKLVG
Sbjct: 144 ---RFQRDMNRK----IDEVMTKEGLVTTHNSDLQRAADILLRNKIEKLPVVDADGKLVG 196
Query: 213 LITRGNVVR 221
LIT ++ +
Sbjct: 197 LITYKDITK 205
>gi|384217331|ref|YP_005608497.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
gi|354956230|dbj|BAL08909.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
Length = 242
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T++ EA ++++ ++G V+DD KLVGVVS+ D + I G + W
Sbjct: 18 TSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFVRRSEIGTGRK---------RGRW 68
Query: 152 KTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F E +G+ V ++MT + + + E+T L + L+ +RLPVV G
Sbjct: 69 LRFILGPGESASDFVHEHGRKVSEVMTTSVVTITEDTALAEIVDLMERNNVKRLPVVRG- 127
Query: 208 GKLVGLITRGNVVRAALQIKRD 229
K+VG+++R N+++A + R+
Sbjct: 128 DKVVGIVSRANLLQAVAGLARE 149
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + + V +T++ +AA ++L+ L VVD GKLVG+++ G+ VR
Sbjct: 6 IMTRSVISVTPHTSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFVR 55
>gi|354610601|ref|ZP_09028557.1| CBS domain containing membrane protein [Halobacterium sp. DL1]
gi|353195421|gb|EHB60923.1| CBS domain containing membrane protein [Halobacterium sp. DL1]
Length = 164
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 23/168 (13%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT D+ V V E L +L + TGFPV+DD +LVGVV+ D++ L
Sbjct: 5 DLMTA--DVETVHEDEEVSEVLRKLARRDFTGFPVVDDADRLVGVVTQRDMVEL-----F 57
Query: 137 NQNDTSLF------PNVNSTWKTFN------ELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
D +++ P + S F+ E + L++ GK + +MT L V +
Sbjct: 58 QPKDRTIWIPIGLPPFLESLEYGFDLSWDELESELDLARHAGKPIRKIMTTDVLTVEPDA 117
Query: 185 NLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
+++D +L + R+PVV+G LVGL+TR +V+R AL +R G
Sbjct: 118 SMDDVLAILASDDRDVNRVPVVEGE-TLVGLVTREDVLR-ALHAERSG 163
>gi|383771913|ref|YP_005450978.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
gi|381360036|dbj|BAL76866.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
Length = 252
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+ ++V +A++ ++ +G PV D KLVG+V + D L I G ++ + +
Sbjct: 14 ISPESSVADAIQLMLSHHFSGLPVTDAGGKLVGIVCESDFLRRTEI--GTEH---VRRRL 68
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
S + + R K +G+ V +MTP P+ V E+T L++ A L+ + +PV+
Sbjct: 69 LSLLLGADRIAREFVKEHGQKVEQVMTPDPVTVAEDTPLDEIAALMECRRVNHIPVMH-E 127
Query: 208 GKLVGLITRGNVVRA 222
G++VG+ITR + V A
Sbjct: 128 GRIVGMITRSDFVSA 142
>gi|21218764|ref|NP_624543.1| hypothetical protein SCO0210 [Streptomyces coelicolor A3(2)]
gi|5777683|emb|CAB53434.1| hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 213
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 91 TTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150
TT E + L RI+G PV+DDD K++GVVS DL+ + G + ++
Sbjct: 11 TTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQAHRAGRRPARAV------- 63
Query: 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
D+M+ + VH + DAARL+ RLPVVD +L
Sbjct: 64 -----------------TAADVMSSPAITVHPEQTVPDAARLMERRGVERLPVVDEEDRL 106
Query: 211 VGLITRGNVVRAALQIKRD 229
+G+ TR +++R L+ D
Sbjct: 107 IGIATRRDLLRVFLRTDDD 125
>gi|77411390|ref|ZP_00787737.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|410594961|ref|YP_006951688.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
gi|421532751|ref|ZP_15979100.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|77162563|gb|EAO73527.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|403641979|gb|EJZ02880.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|410518600|gb|AFV72744.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
Length = 219
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTKK L V TTV EA + L E + PV+++D +LVG+V++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + P+ +T + E+ LL+KT + D+M + V + +LEDA L++
Sbjct: 50 -GTMAEAQ--PS-KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
K LPVVD G+L G++T +V +A L+I G+
Sbjct: 103 SRKIGVLPVVDN-GQLYGIVTDRDVFKAFLEIAGYGQE 139
>gi|77406654|ref|ZP_00783697.1| AcuB family protein [Streptococcus agalactiae H36B]
gi|77174726|gb|EAO77552.1| AcuB family protein [Streptococcus agalactiae H36B]
Length = 219
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTKK L V TTV EA + L E + PV+++D +LVG+V++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + P+ +T + E+ LL+KT + D+M + V + +LEDA L++
Sbjct: 50 -GTMAEAQ--PS-KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
K LPVVD G+L G++T +V +A L+I G+
Sbjct: 103 SRKIGVLPVVDN-GQLYGIVTDRDVFKAFLEIAGYGQE 139
>gi|387783442|ref|YP_006069525.1| putative CBS domain-containing protein [Streptococcus salivarius
JIM8777]
gi|338744324|emb|CCB94690.1| putative CBS domain protein [Streptococcus salivarius JIM8777]
Length = 219
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV A + + +K + PVI+ D KLVG++++
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMAEAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|228476578|ref|ZP_04061260.1| AcuB family protein [Streptococcus salivarius SK126]
gi|228251773|gb|EEK10838.1| AcuB family protein [Streptococcus salivarius SK126]
Length = 219
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV A + + +K + PVI+ D KLVG++++
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMAEAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|386391963|ref|ZP_10076744.1| hypothetical protein DesU5LDRAFT_1345 [Desulfovibrio sp. U5L]
gi|385732841|gb|EIG53039.1| hypothetical protein DesU5LDRAFT_1345 [Desulfovibrio sp. U5L]
Length = 408
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ +V + + ++ L+ +R+ PVI ++ K+ GVV+ DLL+ GG SL
Sbjct: 119 DVASVSPDDPLPKVVDLLLARRVKAVPVIGENGKVAGVVTGGDLLS----RGGMDTRLSL 174
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
N+ E R+ G D+MT + + E L +AA+++ +RLPV
Sbjct: 175 -QNILPDDVRAGERARM----AGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRLPV 229
Query: 204 VDGYGKLVGLITRGNVVRAA 223
VD G+L+G+++R +++R+A
Sbjct: 230 VDETGELIGIVSRADILRSA 249
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 73 YTVGDFMTKKE----DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+T G F ++ D+ T + E + RLV + VID D + G+V D DLL
Sbjct: 262 FTAGLFQQARDVMFTDVPTAAPDTPLPEVVARLVASPLRRVVVIDADRTVRGIVLDGDLL 321
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
G + L + S + E L + + ++M V E+T L D
Sbjct: 322 G----RCGPERKPGLLKALFSFGR--EETACPLGRAS-----EVMQTNVYTVSEDTPLMD 370
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ +L T+ +RL VVD G+L+G++ R +++R
Sbjct: 371 VLQRMLTTRAKRLVVVDDEGRLLGMVDRESLLR 403
>gi|77408331|ref|ZP_00785073.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|421148102|ref|ZP_15607774.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
gi|77173094|gb|EAO76221.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|401685440|gb|EJS81448.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
Length = 219
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTKK L V TTV EA + L E + PV+++D +LVG+V++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + P+ +T + E+ LL+KT + D+M + V + +LEDA L++
Sbjct: 50 -GTMAEAQ--PS-KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
K LPVVD G+L G++T +V +A L+I G+
Sbjct: 103 SRKIGVLPVVDN-GQLYGIVTDRDVFKAFLEIAGYGQE 139
>gi|322517389|ref|ZP_08070263.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
gi|322123987|gb|EFX95543.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
Length = 219
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV A + + +K + PVI+ D KLVG++++
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLITE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMAEAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|312136467|ref|YP_004003804.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224186|gb|ADP77042.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 279
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-- 128
G Y V D M+K D+ V TT+ + +L++K V+ + +G+++ D+L
Sbjct: 133 GRYKVADLMSK--DVVTVNENTTLSH-VAKLLDKNNISRVVVTAGKEPIGIITATDILFA 189
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
LD S G + F V K + RL+S GD+MT + ++++ +L
Sbjct: 190 KLDKPSTGVATEKIFFVRVRPYKK--KKRVRLISTLTA---GDIMTDDLITINQDFDLSK 244
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
AA+++++ K LPV+D GKLVG++T+ +++RA
Sbjct: 245 AAKIMIKNKIGSLPVIDDDGKLVGIVTKTDIIRA 278
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 22/139 (15%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
+++ V+ ++ A +++ I+ PVI++D +LVG++S+ D+ +L I G
Sbjct: 9 DEVIVVRENDSISRARNLMLKNDISHLPVINEDEELVGILSETDIASLLKIGG------- 61
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
WK + +V +MT P+ V N +++DAA L+L LP
Sbjct: 62 ------PAWKR--------RPIDNILVKRIMTKNPVTVSPNEDIKDAADLMLRKDISALP 107
Query: 203 VVDGYGKLVGLITRGNVVR 221
VV+ GK++G++T+ ++VR
Sbjct: 108 VVED-GKILGIVTKTDLVR 125
>gi|170741756|ref|YP_001770411.1| hypothetical protein M446_3596 [Methylobacterium sp. 4-46]
gi|168196030|gb|ACA17977.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
Length = 241
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 15/152 (9%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M + D+ V+ T + VEKRI+ PV+D+ LVG+VS+ DLL ++
Sbjct: 5 DIMHR--DVFTVRPETPLGALARIFVEKRISAAPVVDESGALVGIVSEGDLLHRAELATD 62
Query: 137 NQNDTSL--FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ + L F ++ + + E +G+ V D+M + +T L + +L
Sbjct: 63 RRRSSWLRFFASIETLAHEYRE-------AHGRTVRDVMASPVVTATPDTPLPEIVEILE 115
Query: 195 ETKYRRLPVVDGY----GKLVGLITRGNVVRA 222
RR+P+V+ +LVG++TR ++VRA
Sbjct: 116 RRHIRRVPIVEARPGLPERLVGIVTRSDLVRA 147
>gi|91783939|ref|YP_559145.1| hypothetical protein Bxe_A1873 [Burkholderia xenovorans LB400]
gi|91687893|gb|ABE31093.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 229
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V TV E V+ I+G PV+D + + G++S+ DLL I + +S
Sbjct: 13 SVTPDMTVREVARIFVDNGISGAPVLDPEGHIAGMISEGDLLRRTEIGTDERKPSSWL-- 70
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
W +E + + KT+ V D+MTP + V +T L + A +L + +R+PV
Sbjct: 71 --DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVTQA 127
Query: 207 YGKLVGLITRGNVVRA 222
G++VG+++R N+V+A
Sbjct: 128 -GRVVGIVSRANLVQA 142
>gi|240102816|ref|YP_002959125.1| inosine 5'-monophosphate dehydrogenase [Thermococcus gammatolerans
EJ3]
gi|239910370|gb|ACS33261.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
(IMPD) (guaB) [Thermococcus gammatolerans EJ3]
Length = 485
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 35/139 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ ++ TVD A+ + I G PV++D K+VGV+S D+
Sbjct: 101 EDVISISPDETVDYAIFLMERNDIDGLPVVED-GKVVGVISKKDI--------------- 144
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
+ GK+V D+MT P+ V EN E+A L+ E + RLP
Sbjct: 145 -------------------AVKQGKLVRDIMTGEPITVPENVTAEEALTLMFEHRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVVR 221
VV+ GKLVG+IT ++ +
Sbjct: 186 VVNSEGKLVGIITMSDLAK 204
>gi|313125650|ref|YP_004035920.1| cbs-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
gi|448285488|ref|ZP_21476731.1| cbs-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
gi|312292015|gb|ADQ66475.1| CBS-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
gi|445576744|gb|ELY31194.1| cbs-domain-containing membrane protein [Halogeometricum borinquense
DSM 11551]
Length = 167
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ED+ V V + L RL GFPV+D+D +VG+V+ +DL+ L
Sbjct: 7 DLMT--EDVETVSPDDDVSDVLGRLARADFNGFPVVDEDDHVVGIVTQHDLVGL----FE 60
Query: 137 NQNDTSLFP------------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
++ T P V+ +W F+ L L K K + +MTP + V +
Sbjct: 61 TKDRTLWIPIGLPPFMETVTYAVDISWDDFD-LGVDLVKNMDKPIKKVMTPDVVTVEPDA 119
Query: 185 NLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+L+ LL E RLPV++ G+LVG++ R +V+RA
Sbjct: 120 DLDAILDLLADDERDINRLPVIED-GRLVGVVARQDVIRA 158
>gi|254381613|ref|ZP_04996977.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340522|gb|EDX21488.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 202
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 35/155 (22%)
Query: 74 TVGDFMTKKEDLHAVKTT---TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
TV D MT HAV + T + +E + + RI+ PV+ ++ + GVVS+ DLL
Sbjct: 7 TVADVMT-----HAVISVDRRTAFKDIVEAMRQWRISALPVLSEEGLVAGVVSEADLLL- 60
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
GG+++ G LMT + V ++ + AA
Sbjct: 61 -KAQGGDES-------------------------RAVTAGQLMTVPAVTVTKDATIPGAA 94
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
RL+ +RLPVVDG G+L+G+++RG++++ L+
Sbjct: 95 RLMARGHLKRLPVVDGDGRLIGVVSRGDLLKIYLR 129
>gi|347733998|ref|ZP_08867051.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347517235|gb|EGY24427.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 223
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ ++MTK D+ V T++ +A + L E RI PV+D + +L+G+VSD D+
Sbjct: 3 IREWMTK--DVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDI------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ V D+MT P V + +E A ++
Sbjct: 54 ------KEASPSKATTLD-MHELYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMI 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
E + LPV+D GKLVG+I+ +V + + I
Sbjct: 104 EKRIGGLPVIDDGGKLVGIISDSDVFKVLITI 135
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSI 133
V D MT+ D V+ TV+ ++EKRI G PVIDD KLVG++SD D+ L +I
Sbjct: 78 VKDIMTR--DPFTVRADDTVETVALNMIEKRIGGLPVIDDGGKLVGIISDSDVFKVLITI 135
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDL 172
+G + +T T + L + N +++ L
Sbjct: 136 TGVRHGGVQFAFELENTPGTLKPIVDTLREHNARIISIL 174
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ + MT + V +T++ A+++L E + RRLPVVD G+L+G+++ ++ A+
Sbjct: 2 LIREWMTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEAS 57
>gi|150400031|ref|YP_001323798.1| signal transduction protein [Methanococcus vannielii SB]
gi|150012734|gb|ABR55186.1| putative signal transduction protein with CBS domains
[Methanococcus vannielii SB]
Length = 153
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 90/152 (59%), Gaps = 17/152 (11%)
Query: 86 HAVKTTTTV--DEALERLV----EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN 139
+ +KT T+ D+++E+++ EK I+G P+++ + ++VG++S+ D++ SI+ ++
Sbjct: 6 NVMKTPITLNKDDSIEKVIKLFREKSISGAPIVEGE-RIVGIISESDIIK--SITSHDER 62
Query: 140 DTSLFPN----VNSTWKTFNELQRLLSKTNGKV---VGDLMTPAPLVVHENTNLEDAARL 192
+ + P+ + KT ++++ + + + V + MT + + T + AA
Sbjct: 63 VSLVLPSPFDLIELPLKTALKVEQFMEDIDNALKIEVWEAMTEKVITISPETTINKAAET 122
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+++ K +RLPVV+ GKLVG+ITRG+++ A +
Sbjct: 123 MVKNKIKRLPVVEN-GKLVGIITRGDLIEAMV 153
>gi|221632822|ref|YP_002522044.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
gi|221156254|gb|ACM05381.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
Length = 166
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 80/149 (53%), Gaps = 11/149 (7%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V MT+ D+ A+ T+V E + E I+G PVID+ +++G+V+++DL+A ++
Sbjct: 7 VRSLMTR--DVVAISPETSVGEIARLMWEHAISGVPVIDEQRRVIGIVTEFDLIAREA-- 62
Query: 135 GGNQNDTSLFPNVNSTWK---TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ N P +++ +K T +E Q L K ++M+ + + +E A
Sbjct: 63 --SFNAPLYVPFLDAFFKVPGTGDETQ--LRKILATKAAEIMSSPAITIGPEETIEALAT 118
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVV 220
L+ + +PVVD G+L+G+++R +++
Sbjct: 119 LMYRRRVNPVPVVDEEGRLLGIVSRSDLI 147
>gi|150400679|ref|YP_001324445.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
gi|150013382|gb|ABR55833.1| putative signal transduction protein with CBS domains
[Methanococcus aeolicus Nankai-3]
Length = 155
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 78/137 (56%), Gaps = 12/137 (8%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN------- 146
+ +A+E I+G PVI+DD VGVVS+ D++ +++ N++ L P+
Sbjct: 21 ISDAIELFKTHNISGAPVINDDNYFVGVVSEEDIIK--TLTTHNEDINILLPSPFDLLEL 78
Query: 147 -VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+ +T K E ++ + V ++M + + +T + +A++++++ K +RLP+V+
Sbjct: 79 PLKTTLK-LEEYRKDIENAMKTKVKEIMVKDVITITPDTTINEASKIMVKNKVKRLPIVE 137
Query: 206 GYGKLVGLITRGNVVRA 222
G+LVG++TR +++ A
Sbjct: 138 N-GELVGIVTRHDILEA 153
>gi|340398179|ref|YP_004727204.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|387761955|ref|YP_006068932.1| AcuB family protein [Streptococcus salivarius 57.I]
gi|338742172|emb|CCB92677.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|339292722|gb|AEJ54069.1| AcuB family protein [Streptococcus salivarius 57.I]
Length = 219
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV A + + +K + PVI+ D KLVG++++
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTMAEAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|412986258|emb|CCO17458.1| inosine-5'-monophosphate dehydrogenase [Bathycoccus prasinos]
Length = 399
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 74/157 (47%), Gaps = 32/157 (20%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V +FMTK + ++ D ++ + KR G PV+D+D LVGV+S D+ L IS
Sbjct: 87 VEEFMTKDPET-LCESLKLTDVKVKSFI-KRYHGGPVVDEDGNLVGVISRNDVKRLSYIS 144
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
F E QR + + V D MT PL V + AA L+L
Sbjct: 145 -------------------FGEEQRHI-----RTVADAMTSMPLTVGPKAYISAAAGLML 180
Query: 195 ETKYRRLPVV---DGY---GKLVGLITRGNVVRAALQ 225
+ K RLPVV + Y GKL+G+ITR ++ +Q
Sbjct: 181 KHKIHRLPVVEEGEDYAHPGKLIGIITRSDIWEPLIQ 217
>gi|14590227|ref|NP_142293.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus horikoshii OT3]
gi|6647544|sp|O58045.1|IMDH_PYRHO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|109157383|pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|109157384|pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|3256697|dbj|BAA29380.1| 486aa long hypothetical inosine-5'-monophosphate dehydrogenase
[Pyrococcus horikoshii OT3]
Length = 486
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 35/138 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ + TVD AL + + I G PV++D+ K+VG+++ D+ A +
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE----------- 148
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
GK+V +LMT + V E+ +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVV 220
VVD GKLVGLIT ++V
Sbjct: 186 VVDERGKLVGLITMSDLV 203
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 59 GVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKL 118
G+ + R G V + MTK ++ V + V+EAL+ ++E RI PV+D+ KL
Sbjct: 137 GIITKKDIAAREGKL-VKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKL 193
Query: 119 VGVVSDYDLLA 129
VG+++ DL+A
Sbjct: 194 VGLITMSDLVA 204
>gi|389696309|ref|ZP_10183951.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388585115|gb|EIM25410.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 231
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + +V+ +TT+ EA + ++ RI+G PV D LVG++S+ DLL +
Sbjct: 3 VEDVMTAP--VISVEPSTTIAEAAKLMLADRISGLPVTMRDGTLVGMLSEGDLLRRGEL- 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S + + K +E R ++G+ V +M+ P+ + +E+ +
Sbjct: 60 GTERKRPSWLEFLIGSGKLADEYVR----SHGRKVEQVMSTDPVTTRRDAPIEEIVTAMD 115
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +RLPV+D GK+VG++ R +V+RA
Sbjct: 116 RHRIKRLPVIDN-GKVVGIVARSDVLRA 142
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT + V +T + +AA+L+L + LPV G LVG+++ G+++R
Sbjct: 2 IVEDVMTAPVISVEPSTTIAEAAKLMLADRISGLPVTMRDGTLVGMLSEGDLLR 55
>gi|33862790|ref|NP_894350.1| IMP dehydrogenase [Prochlorococcus marinus str. MIT 9313]
gi|33634706|emb|CAE20692.1| similar to IMP dehydrogenase [Prochlorococcus marinus str. MIT
9313]
Length = 146
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T++ EA++ L + I+G PV++DD LVG +++ DL+ +S G + L
Sbjct: 7 SVVPATSLQEAVQLLSDHHISGLPVVNDDGTLVGELTEQDLMVRES--GVDAGPYVLL-- 62
Query: 147 VNSTWKTFNEL--QRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
++S N L + + + G V DLM +E L AA +L + +RL V+
Sbjct: 63 LDSVIYLRNPLNWDKQVHQVLGTSVNDLMRSDTHTCNEALPLPRAAAMLHDRSTQRLFVI 122
Query: 205 DGYGKLVGLITRGNVVRA 222
+ KLVG+ITRG+VVRA
Sbjct: 123 NDQRKLVGVITRGDVVRA 140
>gi|406926052|gb|EKD62378.1| hypothetical protein ACD_52C00201G0002 [uncultured bacterium]
Length = 154
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V + M K+ ++ V + + L L++ +I+G PV++ +LVGV+S+ DLL
Sbjct: 3 VKEVMVKR--IYTVNSKDGFRKVLRVLIKNKISGVPVVNSKKRLVGVISEKDLL------ 54
Query: 135 GGNQNDTSLFPNVNSTWK------TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
LFP++ ++ + + ++ K N LMT V ++
Sbjct: 55 ------IHLFPSIKEFYRDIDYYLSLDVIETEAKKINRLSASQLMTKKVYTVAPEDHVLK 108
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
A +LL RRLPVV GKLVG++T ++ R LQ
Sbjct: 109 ACSMLLIHNVRRLPVVGEGGKLVGIVTTNDLYRKFLQ 145
>gi|308274761|emb|CBX31360.1| hypothetical protein N47_E48720 [uncultured Desulfobacterium sp.]
Length = 170
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R V D M K D+ V T V +A + L+E I G PV+D + KL G++ D++
Sbjct: 15 RKIMLIVKDIM--KTDVITVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILCQSDII 72
Query: 129 ALDSISGGNQNDTSLFPNVNS--TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNL 186
+ SLF ++ + + +++ + K V M+ P+ V +T++
Sbjct: 73 S----QQKKFPVPSLFAFLDGFISIPSMKHIEKEVQKIAAVTVEHAMSVNPVTVKSDTSI 128
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
E A L+++ + LPVVD GKL+G++ + +++R
Sbjct: 129 EAVAALMVDNNFHTLPVVDD-GKLIGIVGKEDILR 162
>gi|443625999|ref|ZP_21110432.1| putative CBS domain-containing protein [Streptomyces
viridochromogenes Tue57]
gi|443340510|gb|ELS54719.1| putative CBS domain-containing protein [Streptomyces
viridochromogenes Tue57]
Length = 226
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%), Gaps = 18/159 (11%)
Query: 70 NGT-YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+GT + V D MT + AV E ++ + + +++ PV++ + ++VGVVS+ DLL
Sbjct: 2 HGTPHIVSDVMTHT--VTAVGRRAAFREIVQLMQDWKVSALPVLEGEGRVVGVVSEADLL 59
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNL 186
+ +S + +L+RL L+K +LMT L + L
Sbjct: 60 PKEEFR-------------DSDPDRYTQLRRLSDLAKAGAVTAEELMTSPALTTRPDATL 106
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AAR + K +RLPVV+ G L G+++R ++++ L+
Sbjct: 107 AQAARTMAHAKVKRLPVVNELGMLEGIVSRADLLKVFLR 145
>gi|14521857|ref|NP_127333.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
gi|13878566|sp|Q9UY49.1|IMDH_PYRAB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|5459077|emb|CAB50563.1| guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP
dehydrogenase) (IMPDH) (IMPD) [Pyrococcus abyssi GE5]
gi|380742493|tpe|CCE71127.1| TPA: inositol-5-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
Length = 485
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 35/138 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ + TVD AL + + I G PV++++ K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAARE----------- 148
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
GK+V +LMT + V EN +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKDVITVPENIEVEEALKIMIENRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVV 220
VVD G+L+GLIT ++V
Sbjct: 186 VVDKEGRLIGLITMSDLV 203
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 60 VGITNS--VPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK 117
VGI + + R G V + MTK D+ V V+EAL+ ++E RI PV+D + +
Sbjct: 136 VGIISKKDIAAREGKL-VKELMTK--DVITVPENIEVEEALKIMIENRIDRLPVVDKEGR 192
Query: 118 LVGVVSDYDLLA 129
L+G+++ DL+A
Sbjct: 193 LIGLITMSDLVA 204
>gi|187920973|ref|YP_001890005.1| signal transduction protein [Burkholderia phytofirmans PsJN]
gi|187719411|gb|ACD20634.1| putative signal transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 229
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ++ +V TV E V+ I+G PV+D D + G++S+ DL I
Sbjct: 5 DVMTS--NVISVTPEMTVREVARIFVDNGISGAPVLDRDGHVAGMISEGDLFRRAEIGTD 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ TS W E + + KT+ V D+MT + V T L + A +L
Sbjct: 63 ERTRTSWL----DFWSASEEARDYI-KTHALKVRDVMTTDVVTVQPETQLGEVAGILETR 117
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +R+PV D G+LVG+++R N+V+A
Sbjct: 118 RIKRVPVTDA-GRLVGIVSRANLVQA 142
>gi|91975824|ref|YP_568483.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB5]
gi|91682280|gb|ABE38582.1| CBS:transport associated [Rhodopseudomonas palustris BisB5]
Length = 243
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
E + + ++ +A ++E ++G PV+D D KLVG++S+ D + + G Q S
Sbjct: 9 EQVMTIGPEASIIDAANVMLENHVSGLPVVDADGKLVGIISEGDFIRRAEL--GTQRKRS 66
Query: 143 ----LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
L + F +G+ VG++MT P + E+T +E + + +
Sbjct: 67 RWLRLLLGPGTCAADF-------VHEHGRKVGEVMTHHPHTITEDTPIEAIVKTMEKHHV 119
Query: 199 RRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+RLPV+ G LVG++TR N++RA + R+
Sbjct: 120 KRLPVMRG-DLLVGIVTRKNLLRAVANLARE 149
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+MT + + ++ DAA ++LE LPVVD GKLVG+I+ G+ +R A
Sbjct: 6 IMTEQVMTIGPEASIIDAANVMLENHVSGLPVVDADGKLVGIISEGDFIRRA 57
>gi|403722090|ref|ZP_10944831.1| hypothetical protein GORHZ_053_00150 [Gordonia rhizosphera NBRC
16068]
gi|403206806|dbj|GAB89162.1| hypothetical protein GORHZ_053_00150 [Gordonia rhizosphera NBRC
16068]
Length = 238
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT D+ + T+ +E L E+ ++G PV+D D ++VGVVS+ DL+ +
Sbjct: 5 TVADVMTA--DVLCLSLGTSFRSVVEALAERGVSGAPVVDTDGRVVGVVSEADLITAQA- 61
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKT----NGKVVGDLMTPAPLVVHENTNLEDA 189
+ P+ W F L R+ T +G + +M + + + + +A
Sbjct: 62 --------QIPPD---GWHRF--LARVGHSTQETPHGAELDTVMHSPAITIPPDATVREA 108
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
A L +RLPVVD G+ +G+++R +V+R L+ D
Sbjct: 109 ATQLARHDIKRLPVVDDDGRPIGIVSRKDVLRVYLRSDSD 148
>gi|363582867|ref|ZP_09315677.1| Inosine monophosphate dehydrogenase-related protein
[Flavobacteriaceae bacterium HQM9]
Length = 155
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 84/180 (46%), Gaps = 33/180 (18%)
Query: 60 VGITNSV----PPRNG---TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVI 112
+GI+N + P+ G V D+MTKK L + T+ + +E LV ITG PV+
Sbjct: 1 MGISNFMGERAKPKKGMDAAIAVSDYMTKK--LISFSPQHTLLQTMETLVRNEITGGPVV 58
Query: 113 DDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDL 172
D+ L+G++S+ D + K ++ + N ++V
Sbjct: 59 DEKGTLIGMISESDCM-----------------------KQLSDSRYFNMPMNTEIVEKY 95
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
M+ + + ++ +AA ++ Y+R PV++ GKLVG I++ +++ AAL + R
Sbjct: 96 MSTIVETIDSSASIFEAAEQFYKSPYKRFPVLEN-GKLVGQISQHDIILAALHLNSHSWR 154
>gi|410460188|ref|ZP_11313871.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
gi|409927418|gb|EKN64554.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
Length = 181
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM K + VK ++T+ E L+ L RI G PV+DD LVG+VSD D+L +S
Sbjct: 35 VRDFMITK--VFTVKPSSTIKELLDILNSNRIGGVPVVDDKGHLVGMVSDGDVLRY--LS 90
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARLL 193
L + EL+ +L + V ++MT ++ V E RLL
Sbjct: 91 PKRLGFAGLIYIIED-----GELENVLHEKLDTSVKEIMTKRNILSVSPEDEFEMTMRLL 145
Query: 194 LETKYRRLPVVDGYGKLVGLITRGN 218
Y++LPVV+ G+++G+++RG+
Sbjct: 146 SIHNYKKLPVVNRAGRVIGVLSRGD 170
>gi|303246714|ref|ZP_07332992.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
JJ]
gi|302492054|gb|EFL51932.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
JJ]
Length = 412
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
VI+ D + G+++ D+L + GG SL + + NE K +G+ G
Sbjct: 147 VIESDGSVAGIITGGDIL----MRGGMAARLSLQDILPEDIRK-NERD----KISGRTAG 197
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++MT + +++ T+L DAA+L+ +RLPVVD G+LVGL++R +++RAA
Sbjct: 198 EVMTSPVVTINDRTSLRDAAQLMTGKGLKRLPVVDAAGELVGLVSRVDILRAA 250
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
V+D D + G++ D DLL + + P + +F + + + G
Sbjct: 305 VVDADKTVRGIILDSDLL--------RRCGPARKPGLIEALFSFGKPEETGACPTGSA-A 355
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++M P L +HE+ L + + +L K +RL VVD GKL+G++ R ++R
Sbjct: 356 EVMEPNVLTIHEDATLMEVLQKMLAAKVKRLVVVDDAGKLLGMVDREAILR 406
>gi|421735499|ref|ZP_16174422.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
gi|407297212|gb|EKF16671.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
Length = 683
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + V + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAVTPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|355571671|ref|ZP_09042899.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
gi|354825304|gb|EHF09534.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
Length = 157
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MTK V T+ EA L E+ I G PV+D D +LVG++++ D+L L +
Sbjct: 3 VRDVMTKNP--VTVSAGATIREAAALLRERNIGGLPVMDGD-RLVGMITESDILRL--LE 57
Query: 135 GGNQNDTSLFPN----VNSTWKTF---NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
G +D P+ + + F + + L+ K V +M+ + + E+ ++E
Sbjct: 58 TGRISDDLWLPSPLEVIEVPIREFINWEKTRHALTAIGEKEVRTVMSHPVVTIGEDADIE 117
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+AA L+L K RLPV+ G LVG++ R +++R
Sbjct: 118 EAASLMLSKKIARLPVMRG-NTLVGIVARSDIIRG 151
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+V D+MT P+ V + +AA LL E LPV+DG +LVG+IT +++R
Sbjct: 2 LVRDVMTKNPVTVSAGATIREAAALLRERNIGGLPVMDG-DRLVGMITESDILR 54
>gi|311746125|ref|ZP_07719910.1| polyA polymerase family protein [Algoriphagus sp. PR1]
gi|126576346|gb|EAZ80624.1| polyA polymerase family protein [Algoriphagus sp. PR1]
Length = 153
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 24/135 (17%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+D LE L +++I+G PV+D+ LVG++S+ D L I G +T FP
Sbjct: 39 TIDMVLEVLTKRKISGAPVVDESGSLVGIISEVD--CLKEIIKGKYTNTPKFPG------ 90
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
K + D++T P ++ DAA+ LE K RR PV+ G L+G
Sbjct: 91 ----------KVKDHMSVDVITLGP-----ELSIFDAAQKFLELKIRRFPVIRD-GSLIG 134
Query: 213 LITRGNVVRAALQIK 227
I+ +++RA ++K
Sbjct: 135 QISLSDIIRAFPKLK 149
>gi|390568219|ref|ZP_10248529.1| signal-transduction protein [Burkholderia terrae BS001]
gi|420246966|ref|ZP_14750389.1| putative transcriptional regulator, contains C-terminal CBS domains
[Burkholderia sp. BT03]
gi|389939909|gb|EIN01728.1| signal-transduction protein [Burkholderia terrae BS001]
gi|398072813|gb|EJL64013.1| putative transcriptional regulator, contains C-terminal CBS domains
[Burkholderia sp. BT03]
Length = 231
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
K TV EA + LVE RI+G PV+D + L G++S+ DL L + G + S +
Sbjct: 13 CAKPEMTVQEAAKCLVENRISGMPVVDANGVLAGILSEGDL--LHRVETGTEKRRSRWLE 70
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ S+ + +L K +G++V D+MT + V E T + D A L+ + +R+PV+
Sbjct: 71 LFSSTR---DLASTFVKEHGRMVADVMTTTVVTVDETTPVADIAELMETRRIKRVPVMRD 127
Query: 207 YGKLVGLITRGNVVRA 222
G LVG+ITRGN++RA
Sbjct: 128 -GALVGIITRGNLIRA 142
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MTP+ + +++AA+ L+E + +PVVD G L G+++ G+++
Sbjct: 5 DVMTPSVICAKPEMTVQEAAKCLVENRISGMPVVDANGVLAGILSEGDLL 54
>gi|421589648|ref|ZP_16034763.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
gi|403705361|gb|EJZ20969.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
Length = 229
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN---QNDTSLFPNVNST 150
V A + ++ ++G PV+DD +L+GV+S+ DL+ +S G + D L P
Sbjct: 20 VRHAARLMSDQHVSGIPVVDDGGRLLGVISEGDLIRRTELSSGAFVLKADMGLGP----- 74
Query: 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
+E K VGD+MT P+ + E+ L A L+ + +R+PV+ GKL
Sbjct: 75 ----DERANAFVKRCAWRVGDVMTSDPVTIDEDAPLSRVAGLMQDRGIKRIPVLR-DGKL 129
Query: 211 VGLITRGNVVRAALQIKRD 229
+G+++R ++++ K D
Sbjct: 130 IGIVSRADLLQVIYSAKPD 148
>gi|25011667|ref|NP_736062.1| hypothetical protein gbs1627 [Streptococcus agalactiae NEM316]
gi|77414837|ref|ZP_00790953.1| AcuB family protein [Streptococcus agalactiae 515]
gi|24413207|emb|CAD47286.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159114|gb|EAO70309.1| AcuB family protein [Streptococcus agalactiae 515]
Length = 219
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTKK L V TTV EA + L E + PV+++D +L+G+V++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLLGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + P+ +T + E+ LL+KT + D+M + V + +LEDA L++
Sbjct: 50 -GTMAEAQ--PS-KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
K LPVVD G+L G+IT +V +A L+I G+
Sbjct: 103 SRKIGVLPVVDN-GQLYGIITDRDVFKAFLEIAGYGQE 139
>gi|429199472|ref|ZP_19191224.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428664795|gb|EKX64066.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 286
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
L ++++ PV+D D ++GVVS+ DLLA ++ P+ + + L
Sbjct: 105 LGREQVSALPVVDADDHVIGVVSESDLLAKAAVMAE--------PHRHGPVGKLRQ-HHL 155
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
K+ G LMT P+ VH + DAA + +RLPV D +G+LVG+++R +++
Sbjct: 156 YEKSRGDTAATLMTFPPVTVHPAQRVADAAWTAAHARLKRLPVTDHHGRLVGVVSRRDLL 215
Query: 221 RAALQIKRDGE 231
RA I+ D E
Sbjct: 216 RAL--IRDDAE 224
>gi|384097620|ref|ZP_09998740.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
gi|383836502|gb|EID75909.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
Length = 154
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 26/157 (16%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
N +V D MT K L +K ++ E + +E +ITG PV+D +LVG++SD D
Sbjct: 18 NEPISVRDHMTTK--LVTLKPDQSLIEVINLFMENKITGAPVVDVAGRLVGIISDSD--C 73
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+ IS G + FN + N + V D MT + + + DA
Sbjct: 74 MKQISEG---------------RYFN-----MPIANMR-VADYMTKEVQTIDPDKTIFDA 112
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
A +T +RR PV++ G+L+G I+R +V+ AAL++
Sbjct: 113 AAEFFKTHHRRFPVIED-GELIGQISRKDVMLAALKM 148
>gi|222056023|ref|YP_002538385.1| hypothetical protein Geob_2941 [Geobacter daltonii FRC-32]
gi|221565312|gb|ACM21284.1| CBS domain containing membrane protein [Geobacter daltonii FRC-32]
Length = 151
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 87/159 (54%), Gaps = 18/159 (11%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D MTK +++ V TTV E + R++ FPV++++ LVG+V++ DL+
Sbjct: 3 TAADVMTK-DNIITVTRETTVRTLAELFTKHRVSSFPVVNENNHLVGIVTETDLI----- 56
Query: 134 SGGNQNDTSL-FPNVNST--WKTFNE----LQRLLSKTNGKVVGDLMTPAPLVVHENTNL 186
+ D SL P V S W + E ++ L K G+ VGD+ + V+ +T L
Sbjct: 57 ----EQDKSLHIPTVISIFDWVLYLESDKKFEKELKKMTGQTVGDIFSEDVTSVNTSTPL 112
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ A ++ + + LPVV+G KLVG+++R +++R+ ++
Sbjct: 113 NEVADIMSKRQIHALPVVEGQ-KLVGVVSRIDLIRSMIE 150
>gi|383790514|ref|YP_005475088.1| putative signal transduction protein [Spirochaeta africana DSM
8902]
gi|383107048|gb|AFG37381.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Spirochaeta africana DSM 8902]
Length = 212
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V+ TT+V +A L + R PV+++ KL+G+VS+ DLL P+
Sbjct: 14 VEKTTSVTDAQALLRQGRFHRLPVLNNRQKLIGIVSEKDLL-------------YAAPSP 60
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ + E+ LL+K N VGD+MT + V +T +EDAA ++++ LPV+
Sbjct: 61 GTALDVY-EMSELLNKLN---VGDVMTEDVITVDADTLVEDAAGIMVDNNIGGLPVMQD- 115
Query: 208 GKLVGLITRGNVVRAALQI---KRDGERST 234
G+L+G++T ++ R +++ +R+G R T
Sbjct: 116 GQLIGIVTESDLFRLFIELFGTRREGMRFT 145
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
V +MT +P+ V + T++ DA LL + ++ RLPV++ KL+G+++ +++ AA
Sbjct: 3 VAAIMTGSPVTVEKTTSVTDAQALLRQGRFHRLPVLNNRQKLIGIVSEKDLLYAA 57
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
VGD MT ED+ V T V++A +V+ I G PV+ D +L+G+V++ DL L
Sbjct: 78 VGDVMT--EDVITVDADTLVEDAAGIMVDNNIGGLPVM-QDGQLIGIVTESDLFRL 130
>gi|345852848|ref|ZP_08805773.1| hypothetical protein SZN_23656 [Streptomyces zinciresistens K42]
gi|345635711|gb|EGX57293.1| hypothetical protein SZN_23656 [Streptomyces zinciresistens K42]
Length = 217
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 15/127 (11%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
+ E +++ PV++ + +++GVVS+ DLL + + + P QRL
Sbjct: 32 MAEWQVSALPVLEGEGRVIGVVSEADLLPKEEFHDDEERRSP--PR-----------QRL 78
Query: 161 --LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGN 218
++K +LM+ + VH + L AAR++ +RLPVVDG G L G+++R +
Sbjct: 79 AEVAKAGATRAAELMSTPAVTVHADATLAQAARIMAVRHVKRLPVVDGIGMLQGIVSRAD 138
Query: 219 VVRAALQ 225
+++ L+
Sbjct: 139 LLKVFLR 145
>gi|91975830|ref|YP_568489.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
BisB5]
gi|91682286|gb|ABE38588.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
Length = 168
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 22/148 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ + +V T+ E ++ +PV++D + +G+V+ YD L +
Sbjct: 35 VADHMTRP--VKSVSREMTMRELEDQFERDDYNAYPVLEDS-RAIGLVTKYDFLNCFAF- 90
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ T + P+ + L+++T VGD+MTP + VH +T L +L++
Sbjct: 91 ----HPTQMLPHYDD----------LMNRT----VGDIMTPDFIYVHADTKLTRVLQLMV 132
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E + R +PV+D KL G+I+R +V++A
Sbjct: 133 EHQTRSIPVLDADRKLEGIISREDVIKA 160
>gi|402850829|ref|ZP_10899015.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
gi|402498839|gb|EJW10565.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
Length = 240
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT D+ T TV + ++L+E RI G PV+D+ +VG++ + DLL
Sbjct: 5 DIMTT--DVVTAAPTDTVHDVAKKLLEHRIGGLPVVDERSHVVGMIGENDLL-------- 54
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLS----KTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ + + S W F +L+ K +G+ V D+M+ +T + + ARL
Sbjct: 55 -RRAETGTDHTRSGWLQFLLGHEVLAAEFVKEHGRRVSDVMSVEVATATPDTPVGEIARL 113
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L + R+P+VD +LVG++T ++VR
Sbjct: 114 LERHRVTRVPIVDASYRLVGIVTCADLVR 142
>gi|260771538|ref|ZP_05880462.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613503|gb|EEX38698.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R+ T MT + L +K T+ +ALE L + + T PV+DD+ +LVG+ S D
Sbjct: 216 RHQKLTCEHVMTSR--LITLKPNDTIHKALELLQQNQFTALPVVDDEHELVGIFSLVDF- 272
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
L S+ N + +F L K K V M AP+ + +T++
Sbjct: 273 -LRSVE-------------NRKFDSFIALYLHAKKKAKKEVSQFMNAAPVFMRTDTHI-- 316
Query: 189 AARL--LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
AR+ LL + Y +P+VD +L G++T+ +++ IK
Sbjct: 317 -ARMIPLLTSGYHHIPIVDNRNRLKGMVTQSDLIEFLYNIK 356
>gi|254381603|ref|ZP_04996967.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340512|gb|EDX21478.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 213
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 21/131 (16%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
L + ++G PV+DD+ ++VGVVS D+LA + + +T+
Sbjct: 21 LAQYGVSGLPVLDDEDRVVGVVSQTDVLAHAAPAPHPAEETA------------------ 62
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
T GD+M+ + VH DAARL+ RLPVVD +LVG++TR +++
Sbjct: 63 -RPTGSPTAGDVMSTPAVTVHAEETAADAARLMTRRGIERLPVVDEEDRLVGIVTRRDLL 121
Query: 221 RAALQIKRDGE 231
R L ++ D E
Sbjct: 122 R--LFVRPDSE 130
>gi|395777450|ref|ZP_10457965.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 212
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
G YTV D MT + AV T + + + ++ PV++ D +++GVVS+ DLL
Sbjct: 4 GPYTVSDVMTHT--VVAVGRETLFKDVVTLMERWKVAAVPVLEGDGRVIGVVSEADLLPK 61
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ F + E L+K G+ M+ + VH + L +AA
Sbjct: 62 EE-----------FRESDPDRAVQQERLADLAKAGALTAGESMSTPAVTVHADATLPEAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
R++ + +RL V+D G L G+++R ++++ L+
Sbjct: 111 RIMARRRVKRLYVIDAEGYLEGVVSRADLLKVFLR 145
>gi|336121852|ref|YP_004576627.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856373|gb|AEH06849.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 278
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 29/135 (21%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+K + E +E +EK + G PV+D D+KL+ +++ D++ L N
Sbjct: 94 CIKENALLKEVIELFIEKNVGGVPVVDKDYKLISTITERDIIRF------------LKDN 141
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
V+ + K D MT P+V L+D AR +L +RRLPV+
Sbjct: 142 VDKSEKVI----------------DYMTEKPVVATSGERLKDVARTMLRNGFRRLPVI-S 184
Query: 207 YGKLVGLITRGNVVR 221
+LVG+IT + ++
Sbjct: 185 EDRLVGMITSTDFIK 199
>gi|399576936|ref|ZP_10770691.1| cbs-domain-containing membrane protein [Halogranum salarium B-1]
gi|399238380|gb|EJN59309.1| cbs-domain-containing membrane protein [Halogranum salarium B-1]
Length = 165
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 21/150 (14%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL-----FP--- 145
V + L RL GFPV+DDD +VG+V+ +D+++L D +L FP
Sbjct: 20 VSDVLGRLANVDFNGFPVVDDDGHVVGIVTQHDVVSL-----FQTKDRTLWIPVGFPPFM 74
Query: 146 -----NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL--ETKY 198
V+ +WK +L ++ GK V D+MT + V + + + LL E
Sbjct: 75 ETLTYAVDVSWKDL-DLGVDAVRSAGKPVRDVMTTDVVTVAPDDDFDHVLDLLADDERDI 133
Query: 199 RRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
RLPVVD G LVG+I R +V+RA +R
Sbjct: 134 NRLPVVDDGGVLVGIIARQDVLRALRDERR 163
>gi|297529034|ref|YP_003670309.1| hypothetical protein GC56T3_0685 [Geobacillus sp. C56-T3]
gi|297252286|gb|ADI25732.1| CBS domain containing membrane protein [Geobacillus sp. C56-T3]
Length = 214
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 22/139 (15%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ T T+ EAL+ L RI PV+D + +LVG+V+ DL + S+F +
Sbjct: 14 LRATNTIAEALQLLRHHRIRHLPVVDGEGRLVGLVTSQDL---------REASPSIF-RL 63
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ W+ K VGD+M +V H +E+ A L E + LP+V+ +
Sbjct: 64 HEQWEDLE-----------KPVGDVMKTDLIVGHPLDFVEEVAALFYEHRIGCLPIVN-H 111
Query: 208 GKLVGLITRGNVVRAALQI 226
GKLVG+IT+ +++R +++
Sbjct: 112 GKLVGIITQTDLLRTFIEL 130
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 176 APLVVHENTN-LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
AP++ TN + +A +LL + R LPVVDG G+LVGL+T ++ A+ I R E+
Sbjct: 9 APVITLRATNTIAEALQLLRHHRIRHLPVVDGEGRLVGLVTSQDLREASPSIFRLHEQ 66
>gi|392410237|ref|YP_006446844.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
gi|390623373|gb|AFM24580.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
Length = 198
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 50 REV--KAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRIT 107
REV KA+ H + +SV V D MT+ D+ V +T + E E + ++R++
Sbjct: 38 REVYLKAYEHALRRLMHSV-------KVKDVMTR--DVVTVVRSTPIREVAELMAKRRVS 88
Query: 108 GFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGK 167
G PV++ D + G++S+ D L GG Q + + + RL +
Sbjct: 89 GVPVLEADGTVAGIISERDFLWAMG-GGGPQTFMDVVSDCLKGGRCLAAPMRL------Q 141
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
V D+M+ +VV + + +++ R+PVVD GKL+G+ +R +V+
Sbjct: 142 VAEDIMSSPAVVVTPEVPVMEVGDMIIRHGINRIPVVDESGKLIGIASRADVI 194
>gi|390941712|ref|YP_006405473.1| hypothetical protein Belba_0046 [Belliella baltica DSM 15883]
gi|390415140|gb|AFL82718.1| CBS domain-containing protein [Belliella baltica DSM 15883]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 24/135 (17%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+D LE L +++I+G V+D LVG++S+ D L I G ++T FP
Sbjct: 38 TIDHVLELLTKRKISGAAVVDQSGHLVGIISEVD--CLKEIIKGKYSNTPKFPG------ 89
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
V + MT + + + +L DAA+L L+ K RR PV+ KLVG
Sbjct: 90 ---------------TVAEHMTKDVITLKPDLSLFDAAQLFLDKKIRRFPVMKD-EKLVG 133
Query: 213 LITRGNVVRAALQIK 227
++ +V+RA ++K
Sbjct: 134 QLSLSDVIRAFPKLK 148
>gi|328952018|ref|YP_004369352.1| hypothetical protein Desac_0280 [Desulfobacca acetoxidans DSM
11109]
gi|328452342|gb|AEB08171.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
DSM 11109]
Length = 222
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 18/143 (12%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ V T++ +AL + E +I PV+ KLVG++SD DL
Sbjct: 10 DVLTVDENTSMMKALHLMKENKIRRLPVMSHG-KLVGIISDRDL-------------KEA 55
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
P+ +T +EL LL++ + ++MT P+ + + +E AA ++LE K LPV
Sbjct: 56 SPSKATTLDV-HELYYLLAEIK---IKEIMTKNPITIQPDETIERAAVVMLENKVSGLPV 111
Query: 204 VDGYGKLVGLITRGNVVRAALQI 226
V+G +LVG++T+ ++ RA + I
Sbjct: 112 VNGKSELVGIVTQSDIFRAFVNI 134
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ + M L V ENT++ A L+ E K RRLPV+ +GKLVG+I+ ++ A+
Sbjct: 2 LIREWMATDVLTVDENTSMMKALHLMKENKIRRLPVM-SHGKLVGIISDRDLKEAS 56
>gi|114777941|ref|ZP_01452855.1| inosine-5-monophosphate dehydrogenase related protein
[Mariprofundus ferrooxydans PV-1]
gi|114551728|gb|EAU54280.1| inosine-5-monophosphate dehydrogenase related protein
[Mariprofundus ferrooxydans PV-1]
Length = 143
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 21/146 (14%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDD--WKLVGVVSDYDLLALDSISGGNQNDTSLF 144
+ K T+ +A +++V +R PV+DD+ KLVGV++ D + L+
Sbjct: 7 SCKADDTLHDAAQKMVMRRCGSLPVVDDNDSTKLVGVITIRDTM------------LPLY 54
Query: 145 PNVNS------TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
PN T + F +++ + V D+MTP P+ V + AA +
Sbjct: 55 PNFGEYIHDAKTARDFEDMEENYKRVMRMKVRDVMTPNPMSVDSEMPVLKAASFMGLKNL 114
Query: 199 RRLPVVDGYGKLVGLITRGNVVRAAL 224
RR+PVVD GKL+G+++ G++ R
Sbjct: 115 RRMPVVDD-GKLIGMVSIGDINRGMF 139
>gi|398353803|ref|YP_006399267.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
gi|390129129|gb|AFL52510.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
Length = 263
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 25/156 (16%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--- 128
T D M+K ++ ++ ++ A ++E RI+G PV D+ KLVG++S+ DLL
Sbjct: 41 TMLAKDIMSK--NVLSLSPEHSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRA 98
Query: 129 ALDSISGGNQNDTSLFPNV---NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTN 185
L S +G Q P +W+ VGD+MT + V E+
Sbjct: 99 ELGSAAGRGQVSDRPEPEAFIKGHSWR----------------VGDVMTRDVVTVDEDVP 142
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L A ++ + +R+PVV G +VG+I+R +++R
Sbjct: 143 LGRVAAIMAANEIKRIPVVRA-GAMVGIISRSDILR 177
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 140 DTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
D + +N + RL + + + D+M+ L + ++ AAR++LE +
Sbjct: 15 DANSLTGINLLLRATAYAARLKREFDTMLAKDIMSKNVLSLSPEHSISHAARMMLENRIS 74
Query: 200 RLPVVDGYGKLVGLITRGNVVRAA 223
LPV D GKLVG+++ G+++R A
Sbjct: 75 GLPVCDNSGKLVGILSEGDLLRRA 98
>gi|445494340|ref|ZP_21461384.1| CBS domain containing membrane protein [Janthinobacterium sp. HH01]
gi|444790501|gb|ELX12048.1| CBS domain containing membrane protein [Janthinobacterium sp. HH01]
Length = 390
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R G + D M++ D+ + + T++++A +++ R+ PV++ +++G+V+ D L
Sbjct: 236 RFGIISCADIMSR--DVVSAEFGTSLEQAWQQMRTHRVAALPVLNRARRVIGIVTQTDFL 293
Query: 129 ---ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN------GKVVGDLMTPAPLV 179
LD G ++LQR L K+ +VVG +M+ P
Sbjct: 294 EHGGLDDYRGIR-----------------HQLQRFLRKSGVTHTEKAEVVGQIMSQHPTT 336
Query: 180 VHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
+T + D L+ ++ + +P+VD + G++T+ ++V AAL +R E +
Sbjct: 337 AQLDTPIVDLVPLMADSGFHHIPIVDAEQRFAGIVTQSDLV-AALYERRFAEAAA 390
>gi|212225036|ref|YP_002308272.1| inosine 5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
gi|212009993|gb|ACJ17375.1| inosine-5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
Length = 486
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 34/133 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ ++ T+D AL + + I G PV+ +D +++G+++ D+ A
Sbjct: 101 EDVITIEPDETLDYALFLMEKNDIDGLPVVGEDGRIIGIITKKDIAA------------- 147
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
G++V ++MT + V E+ +EDA L++E + RLP
Sbjct: 148 ---------------------KEGRLVREVMTRDVITVPEDIAVEDALTLMVENRIARLP 186
Query: 203 VVDGYGKLVGLIT 215
VVDG GKLVG+IT
Sbjct: 187 VVDGDGKLVGIIT 199
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
V + MT+ D+ V V++AL +VE RI PV+D D KLVG+++ DL+
Sbjct: 153 VREVMTR--DVITVPEDIAVEDALTLMVENRIARLPVVDGDGKLVGIITVSDLM 204
>gi|312862989|ref|ZP_07723228.1| CBS domain protein [Streptococcus vestibularis F0396]
gi|311101484|gb|EFQ59688.1| CBS domain protein [Streptococcus vestibularis F0396]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV A + + +K + PVI+ D KLVG++++
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLITE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M L V + +LEDA ++L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD ++ G+IT +V RA L+I G+
Sbjct: 103 QNKVGVLPVVDN-DQISGIITDKDVFRAFLEISGYGQ 138
>gi|186470680|ref|YP_001861998.1| hypothetical protein Bphy_5888 [Burkholderia phymatum STM815]
gi|184196989|gb|ACC74952.1| CBS domain containing membrane protein [Burkholderia phymatum
STM815]
Length = 242
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 14/135 (10%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
++ +A V+ RI+G PV+D + ++VG+VS DL L + G + + W
Sbjct: 31 SIHDAARLFVDNRISGMPVVDGEGQVVGIVSQGDL--LHRVENGTGHGKRRW------WL 82
Query: 153 TF-----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
F E K + VVGD+M + + E+ L+ A L+ +R+PV+
Sbjct: 83 DFLLSSPREQAARYVKEHAHVVGDVMCDRVISITEDMPLDRIADLMERRHLKRVPVLKD- 141
Query: 208 GKLVGLITRGNVVRA 222
GKLVG+++R N++RA
Sbjct: 142 GKLVGIVSRSNLIRA 156
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 36/50 (72%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+MT + + + ++ DAARL ++ + +PVVDG G++VG++++G+++
Sbjct: 17 DIMTTSVVTATPDMSIHDAARLFVDNRISGMPVVDGEGQVVGIVSQGDLL 66
>gi|392957843|ref|ZP_10323363.1| CBS domain containing membrane protein [Bacillus macauensis
ZFHKF-1]
gi|391876192|gb|EIT84792.1| CBS domain containing membrane protein [Bacillus macauensis
ZFHKF-1]
Length = 160
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM D++ T+ E +E L + + G PV+D + KL+ ++SD D+L ++
Sbjct: 3 VQDFMIS--DVYVAHLDQTLSEVMEMLARQNVGGMPVVDHEGKLLSMISDGDILR--ALK 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTP--APLVVHENTNLEDAARL 192
+++ F V ++ E + ++ T + +L+ V +E A L
Sbjct: 59 PKSRHMYDFFSFV--FYEEQAEFEEVIRHTGATPLRELLPKRIKTYTVSPQDEMEHALGL 116
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L + +++LPV+D +VG+I+RG++++
Sbjct: 117 LAKHHFKKLPVIDEQQHVVGIISRGDIIK 145
>gi|389693107|ref|ZP_10181201.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388586493|gb|EIM26786.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 298
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 8/149 (5%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT+ D+ +V T + V E L KRI+ PV+ D +VG+VS+ DL+ I
Sbjct: 73 TVADVMTR--DVVSVSTASPVSEIAGVLAGKRISAVPVVGADGHVVGIVSESDLIRRAEI 130
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G Q S + + + + E + +T+G+ +MT + E+ L D ++
Sbjct: 131 --GTQRRRSWWRRILADIEA--EAAEYV-RTHGRKARHVMTSRVVTATEDMTLADVTDVM 185
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + +RLPV G LVG+++R ++V+A
Sbjct: 186 EKRRLKRLPVARGK-HLVGIVSRSDLVKA 213
>gi|320160660|ref|YP_004173884.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
gi|319994513|dbj|BAJ63284.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
Length = 275
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 21/151 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V ++M+ E++ V+ T++ EA + KRI PV+++D +LVG+V+ DL++
Sbjct: 143 VAEYMS--EEVVVVEPDTSLLEAHRLMGTKRIRALPVLEED-RLVGLVTRTDLVS----- 194
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+D S F + + Q L K + V +MT + V T L++AARLLL
Sbjct: 195 ----SDPSRFIS--------RKQQELSLKILTQPVEGIMTRTLVTVSPQTTLKEAARLLL 242
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
E K LPVV+ KLVG++T ++ R +Q
Sbjct: 243 EKKIHSLPVVEN-SKLVGILTESDLFRMVVQ 272
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 21/142 (14%)
Query: 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLF 144
++ V T + +A L ++I PV+ KLVG+V+ LL D
Sbjct: 14 VYTVTPETFIVDARRLLDVRKIRHLPVVSAG-KLVGIVTRRGLLRAD------------L 60
Query: 145 PNV-NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
P V + TW+ +L + + + D+MT P+ V NT + AAR++LE K LPV
Sbjct: 61 PAVSDETWEIAFDL-------HHQTIRDIMTVNPITVFPNTPMPKAARVMLENKITGLPV 113
Query: 204 VDGYGKLVGLITRGNVVRAALQ 225
++ +LVG++T ++ R ++
Sbjct: 114 LNDQRELVGILTSSDIFRFIIE 135
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+V + M+ V T + DA RLL K R LPVV GKLVG++TR ++RA L
Sbjct: 5 IVKNWMSSPVYTVTPETFIVDARRLLDVRKIRHLPVVSA-GKLVGIVTRRGLLRADL 60
>gi|386828147|ref|ZP_10115254.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
gi|386429031|gb|EIJ42859.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
Length = 142
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 20/153 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + M+ + L+ +K T TV +A + +++K I P++D+ +G+++ +D+LAL
Sbjct: 3 TVKELMSHR--LYTLKPTDTVHQARQLMLDKHIRHIPIVDNHGTFLGLITKHDILAL--- 57
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
S ++ E Q + +G + +M +V E+TNL +AAR +
Sbjct: 58 ------SVSELADI--------EPQERIEIESGIPLSQVMLTEVVVAQESTNLLEAARFI 103
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
LE K+ LPV +L G++T + V+ A+ +
Sbjct: 104 LEQKHGCLPVFRD-QQLTGMLTEADFVKLAIHL 135
>gi|407710625|ref|YP_006794489.1| hypothetical protein BUPH_05583 [Burkholderia phenoliruptrix
BR3459a]
gi|407239308|gb|AFT89506.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 230
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 17/144 (11%)
Query: 87 AVKTTT---TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
AV T T T+ +A V+ I+G PV+D + K+VG+VS DL L + G ++
Sbjct: 10 AVVTATPDMTIYDAARLFVDNHISGMPVLDANGKVVGIVSQGDL--LHRVENGTRHGKRR 67
Query: 144 FPNVNSTWKTF-----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
+ W F E K +G VGD+M + + ++ L+ A L+
Sbjct: 68 W------WLEFLLSSPREQAARYVKEHGHNVGDVMCTQVITIADDMPLDQVADLMERRHL 121
Query: 199 RRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV+ GKLVG+++R N++RA
Sbjct: 122 KRVPVLKD-GKLVGIVSRSNLIRA 144
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
D+MT A + + + DAARL ++ +PV+D GK+VG++++G+++ R G
Sbjct: 5 DIMTTAVVTATPDMTIYDAARLFVDNHISGMPVLDANGKVVGIVSQGDLLHRVENGTRHG 64
Query: 231 ER 232
+R
Sbjct: 65 KR 66
>gi|294101728|ref|YP_003553586.1| hypothetical protein [Aminobacterium colombiense DSM 12261]
gi|293616708|gb|ADE56862.1| CBS domain containing membrane protein [Aminobacterium colombiense
DSM 12261]
Length = 150
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--ALDS 132
+GD M + DL +V T + EA+E L + +TG PV+D+ LVG +S+ D++ +L S
Sbjct: 3 IGDLMDR--DLTSVTENTPLKEAIEMLSQHNLTGLPVVDEMGFLVGFISEKDIIKASLPS 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ + P+ F++L L K + VG MT + E + AA
Sbjct: 61 YCEYLEKGAAFIPD-------FDQLSEKLRKKGMEPVGKYMTRKVIYFSEEDSDLHAALS 113
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L++ + PVV G VG+++R +++
Sbjct: 114 LIQQGLKMAPVVREDGVFVGIVSRAHLIE 142
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+GDLM V ENT L++A +L + LPVVD G LVG I+ ++++A+L
Sbjct: 3 IGDLMDRDLTSVTENTPLKEAIEMLSQHNLTGLPVVDEMGFLVGFISEKDIIKASL 58
>gi|319778179|ref|YP_004134609.1| cbs domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171898|gb|ADV15435.1| CBS domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 232
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
A+ + ++ +A ++ +I+G PVI D LVG++S+ DLL + + G Q
Sbjct: 13 AIDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLRREEL--GTQRK------ 64
Query: 147 VNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
W F + NG+ + ++MT + + N +L + L+ + +R+P
Sbjct: 65 -RPRWLEFLVSPGRVAEEYVLANGRRIEEVMTDSVVTASPNASLAEVVELMTHHRIKRVP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIK 227
+VDG K+VG+I R +++RA L ++
Sbjct: 124 IVDG-DKVVGMIARSDLLRALLDMQ 147
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + + + ++ DAA L+L +K LPV+ G LVG+I+ G+++R
Sbjct: 6 IMTTPVVAIDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLR 55
>gi|138896350|ref|YP_001126803.1| acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|196249976|ref|ZP_03148671.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
gi|134267863|gb|ABO68058.1| Acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
gi|196210490|gb|EDY05254.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
Length = 214
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 22/139 (15%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ T T+ EAL+ L RI PVID++ L+G+V+D DL D S P++
Sbjct: 14 LRATNTIAEALQLLRHHRIRHLPVIDEEGHLIGLVTDRDL-----------RDAS--PSI 60
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ +LQ K V +M +V H +E+ A L E + LP+V+G
Sbjct: 61 FHLHQHLEDLQ--------KPVSTIMKTDIIVGHPLDFVEEVAALFYEHRIGCLPIVNG- 111
Query: 208 GKLVGLITRGNVVRAALQI 226
GKLVG+IT +++ +Q+
Sbjct: 112 GKLVGIITETDLLHTLIQL 130
>gi|365893444|ref|ZP_09431621.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425843|emb|CCE04163.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 242
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T + EA ++ + ++G PV+D KLVGVVS+ D + I G + +
Sbjct: 14 VTPETPIVEAANIMLTRHVSGLPVVDSAGKLVGVVSEGDFIRRSEI-GTERKRGRWLRFI 72
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
K+ + + +G+ V ++MT APL + E+T L + ++ +RLPV G
Sbjct: 73 LGPGKSAAD----FVQEHGRKVSEVMTKAPLTITEDTALAEIVDIMERNHVKRLPVTRG- 127
Query: 208 GKLVGLITRGNVVRAALQIKR 228
++VG+++R N+++A + R
Sbjct: 128 DQVVGIVSRANLLQAVASLAR 148
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+MT + V T + +AA ++L LPVVD GKLVG+++ G+ +R
Sbjct: 6 IMTRPVITVTPETPIVEAANIMLTRHVSGLPVVDSAGKLVGVVSEGDFIR 55
>gi|448425966|ref|ZP_21583074.1| CBS domain containing membrane protein [Halorubrum terrestre JCM
10247]
gi|448452595|ref|ZP_21593434.1| CBS domain containing membrane protein [Halorubrum litoreum JCM
13561]
gi|448508048|ref|ZP_21615282.1| CBS domain containing membrane protein [Halorubrum distributum JCM
9100]
gi|448518486|ref|ZP_21617563.1| CBS domain containing membrane protein [Halorubrum distributum JCM
10118]
gi|445679927|gb|ELZ32380.1| CBS domain containing membrane protein [Halorubrum terrestre JCM
10247]
gi|445697625|gb|ELZ49685.1| CBS domain containing membrane protein [Halorubrum distributum JCM
9100]
gi|445705067|gb|ELZ56971.1| CBS domain containing membrane protein [Halorubrum distributum JCM
10118]
gi|445808661|gb|EMA58722.1| CBS domain containing membrane protein [Halorubrum litoreum JCM
13561]
Length = 166
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T T D M + D+ V V + +R +GFPV+DDD ++VGV+++ DL+ L
Sbjct: 2 TLTARDLM--EPDVKTVSPDDDVADVFKRFARYEFSGFPVVDDDERVVGVITESDLVDL- 58
Query: 132 SISGGNQNDTSLFP------------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV 179
+++T P V W + L L + K + ++M+
Sbjct: 59 ---FEPEDETLWIPIGLPPFVDTLSYQVKRPWADID-LGVDLIRNADKPISEVMSTDVAT 114
Query: 180 VHENTNLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
V + +++D LL+ + R+PVVD G+LVG+I R +V+RA
Sbjct: 115 VTPDASVDDVLDLLVGDDPDINRVPVVDEDGRLVGIIARQDVIRA 159
>gi|340782050|ref|YP_004748657.1| CBS domain containing membrane protein [Acidithiobacillus caldus
SM-1]
gi|340556203|gb|AEK57957.1| CBS domain containing membrane protein [Acidithiobacillus caldus
SM-1]
Length = 161
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 64 NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
+ P T MT+ E +H V V +RL+E PV+D D ++VG++
Sbjct: 2 TAAPETAAPKTAATIMTR-EVVH-VAEGDDVQVVAKRLLESGHHSLPVLDQDGRVVGMIG 59
Query: 124 DYDLLALDSISGGNQ----NDTSLFPNVN--STWKTFNELQRLLSKTNGKVVGDLMTPAP 177
+ DL I Q SL +V S W+ + E R K L TP P
Sbjct: 60 ERDL-----IDAHRQIHLPTVLSLLDSVIPISGWREYEEELR---KATAVTALQLATPKP 111
Query: 178 LVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
V H ++E A +L+ LPVVD G L+G+++R +++RA +Q
Sbjct: 112 EVAHLGDSVESLADRILKRNLHALPVVDDGGHLLGIVSRSDILRALIQ 159
>gi|398822156|ref|ZP_10580542.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398227150|gb|EJN13386.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 242
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T++ EA ++++ ++G V++D KLVGVVS+ D + I G +
Sbjct: 13 SVTPDTSIVEAANIMLKRHVSGLTVVNDTGKLVGVVSEGDFIRRSEIGTGRK-------- 64
Query: 147 VNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
W F + +G+ V ++MT +P+ + E+T L + + +RLP
Sbjct: 65 -RGRWLRFILGPGKSASDFVHEHGRKVSEVMTASPVTITEDTALAEIVDHMERNNVKRLP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKRD 229
VV G K+VG+++R N+++A + R+
Sbjct: 124 VVRG-DKVVGIVSRANLLQAVAGLARE 149
>gi|319792614|ref|YP_004154254.1| cbs domain containing membrane protein [Variovorax paradoxus EPS]
gi|315595077|gb|ADU36143.1| CBS domain containing membrane protein [Variovorax paradoxus EPS]
Length = 376
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 10/160 (6%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R GT GD M+ +V+ T + EA + EKRI PV D ++VG+V+ D
Sbjct: 224 RLGTLDCGDIMSPNPI--SVEFGTPLQEAWALMHEKRIKALPVTDRTRRVVGIVTQADFF 281
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
Q D + + R + +VVG +MT V + D
Sbjct: 282 --------RQLDLQHHEGIAGRLRDLIRATRTVVSNKPEVVGQIMTRQVRVASAERPVVD 333
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
L E + +P++DG +L G+IT+ + VRA + R
Sbjct: 334 LVPLFSEGGHHHIPIIDGEKRLTGMITQSDFVRALYRAVR 373
>gi|386724649|ref|YP_006190975.1| hypothetical protein B2K_21315 [Paenibacillus mucilaginosus K02]
gi|384091774|gb|AFH63210.1| hypothetical protein B2K_21315 [Paenibacillus mucilaginosus K02]
Length = 152
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M + +++ V T +V + +E RI+G PV++ K+VG +SD D++ G
Sbjct: 6 DIMIR--NVYCVNETDSVRSVIRMFLEHRISGVPVVNGRKKIVGYISDGDIMEYI----G 59
Query: 137 NQNDT---SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
D SLF F +R +S+ V D+ T + V +E+ A +L
Sbjct: 60 RHEDRVVGSLFFTFVFRGDEFGFDER-ISRILDLPVMDIATKKVITVQAEEPMENIAAIL 118
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + ++LP V+ +G+L G+I+RG+V+R + +
Sbjct: 119 AQRQIKKLP-VEQHGELAGIISRGDVIRHSFK 149
>gi|422848126|ref|ZP_16894802.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|422851118|ref|ZP_16897788.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|422878252|ref|ZP_16924718.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|422928107|ref|ZP_16961049.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|422931103|ref|ZP_16964034.1| CBS domain protein [Streptococcus sanguinis SK340]
gi|325690658|gb|EGD32659.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|325694987|gb|EGD36891.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|332367226|gb|EGJ44961.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|339617252|gb|EGQ21878.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|339620285|gb|EGQ24855.1| CBS domain protein [Streptococcus sanguinis SK340]
Length = 218
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD +L G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQLYGVITDRDIFKAFLEVSGYGEE 139
>gi|323351071|ref|ZP_08086728.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|401681231|ref|ZP_10813136.1| CBS domain protein [Streptococcus sp. AS14]
gi|422820741|ref|ZP_16868934.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|422823062|ref|ZP_16871250.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|422826857|ref|ZP_16875036.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|422847223|ref|ZP_16893906.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|422854801|ref|ZP_16901465.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|322122795|gb|EFX94504.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|324991359|gb|EGC23292.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|324993712|gb|EGC25631.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|324994975|gb|EGC26888.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|325687061|gb|EGD29084.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|325696296|gb|EGD38187.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|400187366|gb|EJO21561.1| CBS domain protein [Streptococcus sp. AS14]
Length = 218
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD +L G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQLYGVITDRDIFKAFLEVSGYGEE 139
>gi|418466974|ref|ZP_13037875.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
gi|371552443|gb|EHN79690.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
Length = 224
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D M+ + + V+ T E L+E IT PV+D + + VGVVS+ DLL +
Sbjct: 5 TVRDLMS--DAVVRVQRGTPFKEIAHLLLEYDITAVPVVDGENRPVGVVSEADLL--QKM 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
GG P+ + ++ G LMT PL E+ ++ +AAR++
Sbjct: 61 WGGE-------PDGSPEHAEWSRAAAAGKADATDADG-LMTSPPLCARESWSVVEAARVM 112
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+ +RL VVD G+L G+++R +++R L+ R
Sbjct: 113 ARHRIKRLLVVDEEGRLAGVVSRSDLLRVFLRTDR 147
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ V DLM+ A + V T ++ A LLLE +PVVDG + VG+++ ++++
Sbjct: 4 QTVRDLMSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDGENRPVGVVSEADLLQKMWGG 63
Query: 227 KRDG 230
+ DG
Sbjct: 64 EPDG 67
>gi|13475518|ref|NP_107082.1| hypothetical protein mll6611 [Mesorhizobium loti MAFF303099]
gi|14026270|dbj|BAB52868.1| mll6611 [Mesorhizobium loti MAFF303099]
Length = 232
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 91 TTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150
+ ++ EA ++ K+++G PVI +D +LVG+VS+ D L + G + + + +
Sbjct: 17 SASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLRRGEL-GTERKRSRWLEFLVTP 75
Query: 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
+ +E R NG+ V ++M+ + +L L+ +R+P +G GK+
Sbjct: 76 GRAADEYVR----ANGRRVEEVMSQDVVTASPAASLAKVVELMTRRHVKRIPATEG-GKV 130
Query: 211 VGLITRGNVVRAALQIKRDG 230
VG+ITR +++RA L + DG
Sbjct: 131 VGIITRSDLLRALLGVLPDG 150
>gi|301058318|ref|ZP_07199351.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300447554|gb|EFK11286.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 225
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 20/158 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M+K + ++ +A++R+ EK I+ PVI KLVGVV+D DL
Sbjct: 3 VKDWMSK--GVITADANDSMQDAMQRMKEKGISMLPVIKKG-KLVGVVTDRDL------- 52
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ S ++T +EL L++K V D+MT P+ + + +E+AA +LL
Sbjct: 53 --KRASAS-----DATTLEVHELLFLITKIK---VQDIMTRNPITIPFDFTVEEAAEVLL 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
E PV+D GK++G+IT+ ++ R + + G+R
Sbjct: 103 EKNISGAPVMDEKGKVIGIITKNDLFRVLISLTGVGKR 140
>gi|225181720|ref|ZP_03735159.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225167591|gb|EEG76403.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 153
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 15/152 (9%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
DL + T+ E ++ +VE+ I+G PVID+ L+G+VS+ D++ L + T +
Sbjct: 10 DLVTIAEDKTLREVIKLMVEQNISGIPVIDETGNLMGIVSESDVIRL-------KRKTHM 62
Query: 144 FPNVNSTWKTFNELQ------RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETK 197
+ NE Q ++ N V D MT + V E+T L + RL++E
Sbjct: 63 PDYIQLLEAMLNEAQPEQFSADVIRSLNMP-VKDFMTKKVVTVKEDTTLAEITRLMVEHN 121
Query: 198 YRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
R+PVV KL+G++TR + + A ++ D
Sbjct: 122 INRIPVV-RKQKLLGIVTRRDAILAMAKLSPD 152
>gi|46190448|ref|ZP_00121474.2| COG0477: Permeases of the major facilitator superfamily
[Bifidobacterium longum DJO10A]
gi|189439522|ref|YP_001954603.1| major facilitator superfamily permease [Bifidobacterium longum
DJO10A]
gi|189427957|gb|ACD98105.1| permease of the major facilitator superfamily [Bifidobacterium
longum DJO10A]
Length = 683
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|448500146|ref|ZP_21611625.1| CBS domain containing membrane protein [Halorubrum coriense DSM
10284]
gi|445696868|gb|ELZ48947.1| CBS domain containing membrane protein [Halorubrum coriense DSM
10284]
Length = 166
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
+ T D M + D+ V V + +R +GFPV+DDD ++VGV+++ DL+ L
Sbjct: 2 SLTARDLM--EPDVKTVSPDDDVADVFKRFARYEFSGFPVVDDDERVVGVITESDLVDL- 58
Query: 132 SISGGNQNDTSLFP------------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV 179
+++T P V W + L + + + V D+M+
Sbjct: 59 ---FEPEDETLWIPIGLPPFVDTLSYQVKRPWADLD-LGVDMIRNADRPVSDVMSADVAT 114
Query: 180 VHENTNLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
V + ++D LL+ + R+PVVD G+LVG+I R +V+RA
Sbjct: 115 VTPDAPVDDVLDLLVGDDPDINRVPVVDDEGRLVGIIARQDVIRA 159
>gi|402847927|ref|ZP_10896195.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402501722|gb|EJW13366.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 243
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT + + +++ TV+EA+ ++++ RI+G PV+D + LVG+V++ D L
Sbjct: 5 DVMTSR--VVSIRPEATVEEAVRQMLDNRISGLPVVDGEGDLVGIVTEGDFLRRAETGTC 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+ L + N L + +++G+ V ++MT P+ V E+T L DA ++E
Sbjct: 63 RKRPRWLEILIGP-----NSLAKDYVRSHGRKVEEVMTRDPVTVTEDTTL-DAIVSIMER 116
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ + V ++VG+++R N++ A + RD
Sbjct: 117 RRVKRVPVVRGREVVGIVSRANLLHALASVSRD 149
>gi|422857902|ref|ZP_16904552.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|422859605|ref|ZP_16906249.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|422870375|ref|ZP_16916868.1| CBS domain protein [Streptococcus sanguinis SK1087]
gi|327462076|gb|EGF08405.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|327470488|gb|EGF15944.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|328946590|gb|EGG40728.1| CBS domain protein [Streptococcus sanguinis SK1087]
Length = 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD +L G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQLYGVITDRDIFKAFLEVSGYGEE 139
>gi|410463616|ref|ZP_11317120.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409983278|gb|EKO39663.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 29/157 (18%)
Query: 75 VGDFM-----TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
VGD+M T ED+ +K + E++I PV+D D KLVG+VS+ DL A
Sbjct: 3 VGDWMSTDVATATEDVSMIKAGRI-------MRERKIRRLPVVDKDGKLVGIVSERDLKA 55
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
S TSL E+ LLS+ K + MT P+ + +E A
Sbjct: 56 ASPSSA-----TSL---------DMYEMTYLLSELKVKAI---MTKDPVRIRRTDTVERA 98
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
A ++ + K+ LPVVD K+VG+IT ++ R + I
Sbjct: 99 ALIMRDRKFGSLPVVDEADKVVGIITDTDIFRLFVSI 135
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+VGD M+ E+ ++ A R++ E K RRLPVVD GKLVG+++
Sbjct: 2 LVGDWMSTDVATATEDVSMIKAGRIMRERKIRRLPVVDKDGKLVGIVS 49
>gi|389851878|ref|YP_006354112.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
gi|388249184|gb|AFK22037.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
Length = 485
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 35/138 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ + TV+ AL + + I G PV++D K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVEFALFLMEKHDIDGLPVVED-GKVVGIISKKDIAARE----------- 148
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
GK+V DLMT + V E ++E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKDLMTKEVITVPECVDVEEALKIMIENRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVV 220
VV+ GKLVGLIT ++V
Sbjct: 186 VVNKEGKLVGLITMSDLV 203
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 60 VGITNS--VPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK 117
VGI + + R G V D MTK ++ V V+EAL+ ++E RI PV++ + K
Sbjct: 136 VGIISKKDIAAREGKL-VKDLMTK--EVITVPECVDVEEALKIMIENRIDRLPVVNKEGK 192
Query: 118 LVGVVSDYDLLA 129
LVG+++ DL+A
Sbjct: 193 LVGLITMSDLVA 204
>gi|312132929|ref|YP_004000268.1| permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
gi|311773905|gb|ADQ03393.1| Permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
Length = 683
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|291456610|ref|ZP_06596000.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|417943311|ref|ZP_12586561.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
gi|291381887|gb|EFE89405.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|376165621|gb|EHS84569.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
Length = 692
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L SI+ S ST
Sbjct: 555 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIATYESRTVS--TGTGSTMVV 610
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 611 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 669
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 670 VGVIRRKSVMEHAF 683
>gi|384197111|ref|YP_005582855.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109832|gb|AEF26848.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
Length = 683
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|326315657|ref|YP_004233329.1| CBS domain-containing membrane protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372493|gb|ADX44762.1| CBS domain containing membrane protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 383
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
G GD M+++ A T + EA + +RI PV+D ++VG+V+ D +
Sbjct: 236 GQLRCGDIMSREPVTAAFGTG--LQEAWALMRRRRIKALPVVDRARRIVGIVTTADFM-- 291
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
Q D + + + + T +VVG +MT VV E +
Sbjct: 292 ------RQIDLDVHQGIGEQLRALVRRVGAVHSTKPEVVGQIMTRQVRVVSEQRPALELV 345
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L E + +PV+D +LVG+IT+ ++VRA
Sbjct: 346 PLFTEDGHHHIPVIDAERRLVGIITQSDLVRA 377
>gi|154249652|ref|YP_001410477.1| CBS domain-containing protein [Fervidobacterium nodosum Rt17-B1]
gi|154153588|gb|ABS60820.1| CBS domain containing protein [Fervidobacterium nodosum Rt17-B1]
Length = 155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V D MT DL V TV++ ++ L + ++G PV+D+D K+VG +S+ D++
Sbjct: 3 TLKVKDVMTY--DLTFVFENETVEQVIDLLEKSSMSGVPVVDNDLKVVGFISEEDIIRAC 60
Query: 132 SISGGNQNDTSLF-PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
S N T+ F P+ N ++ R +G ++ V N + A
Sbjct: 61 LPSYFNLLQTAAFLPDTNLVLSNLKKISR-------DPIGKYISKPVFTVKPNDTILYVA 113
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ ++ +PVVD L+G++TR +V+++A++
Sbjct: 114 DAFMRKNFKMIPVVDDNNTLIGVVTRISVLKSAIK 148
>gi|309792767|ref|ZP_07687211.1| CBS domain-containing protein [Oscillochloris trichoides DG-6]
gi|308225177|gb|EFO78961.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
Length = 419
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 11/158 (6%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P G TVGD M K A + V AL L++ R++ P+ D++ +LVG++S+ +L
Sbjct: 114 PLKGDRTVGDVMRKPAPTAA--SEANVSTALALLIKHRLSALPISDEEGRLVGLLSEQEL 171
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
+ G + +LF ++ T +E L++ + + ++M+ P V T+L
Sbjct: 172 ----AWRLGLRLPLNLFGHL-----TPDERDTLVAPRINRPLREVMSAEPRSVSIFTSLP 222
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
A ++E Y +PVVD GK+VG+I + +V+R ++
Sbjct: 223 QALVTMVEWGYPHVPVVDREGKVVGIIGQEDVLRVVVE 260
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ P P V + AA+ LLE + LPVVD +L+G+I RG +VRA LQ
Sbjct: 363 FVQPDPPTVRPEMPISQAAQRLLELGHESLPVVDSEQRLLGIIARGGLVRAILQ 416
>gi|296453971|ref|YP_003661114.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. longum JDM301]
gi|296183402|gb|ADH00284.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. longum JDM301]
Length = 683
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|315226962|ref|ZP_07868750.1| EmrB/QacA family drug resistance transporter [Parascardovia
denticolens DSM 10105 = JCM 12538]
gi|315121094|gb|EFT84226.1| EmrB/QacA family drug resistance transporter [Parascardovia
denticolens DSM 10105 = JCM 12538]
Length = 413
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ 138
+ K +++ + T T +A+ EK+I+G PV+++ +LVG VSD D+L+ +++ +
Sbjct: 270 LMMKAEVYTLPATATALDAMRLFTEKKISGAPVVNEQGELVGFVSDGDVLS--TLAEQHP 327
Query: 139 NDTSLFPNV-NSTWKTFN-ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
TS + V S ++F+ +L LLS V + T + N ++ +++++
Sbjct: 328 QFTSFYAAVIESNGESFDKKLDELLSLP----VDRISTKHVITADANDSMPHICQVMVQR 383
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+++PV+D G++VG++ R N++R A+
Sbjct: 384 HLKKVPVMD-QGRMVGILNRSNILRYAV 410
>gi|319764031|ref|YP_004127968.1| CBS domain-containing protein [Alicycliphilus denitrificans BC]
gi|317118592|gb|ADV01081.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
Length = 225
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R V D MT+ ++ ++ ++ +A + L ++++ PV+D ++VG++ D+
Sbjct: 82 RRPLTQVSDVMTR--EVFSLPAAMSIQDAWQALRLEQLSQAPVVDARGQVVGLLRRSDMA 139
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ D L P++ +TF + R ++ +++PAP V ++T+L
Sbjct: 140 SAD-----------LLPDLEGIKRTFAQAHRPITDV-------MLSPAP-TVSDDTDLRR 180
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A+ +LET LPV D G L G + R +++RA
Sbjct: 181 VAKAMLETGLSGLPVTDEAGMLQGFVARSDILRA 214
>gi|157364486|ref|YP_001471253.1| signal transduction protein [Thermotoga lettingae TMO]
gi|157315090|gb|ABV34189.1| putative signal transduction protein with CBS domains [Thermotoga
lettingae TMO]
Length = 315
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 29/138 (21%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+VK T+ + E L KRI+G PV+D + KL+G+VS D++ ++ GG +DT
Sbjct: 27 SVKPDRTLRQVKEILRIKRISGLPVVDSERKLIGIVSIEDIIK--ALEGGYVDDT----- 79
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
V + MT + + N+ L+D + + Y R PVVD
Sbjct: 80 ----------------------VEERMTKNVVSIQSNSTLKDVIEVFEKWPYGRFPVVDS 117
Query: 207 YGKLVGLITRGNVVRAAL 224
KLVG++T+ +V+ A L
Sbjct: 118 ENKLVGIVTKNDVMMALL 135
>gi|288932598|ref|YP_003436658.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288894846|gb|ADC66383.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 278
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 37/145 (25%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ED+ ++ T D+ +E + I+ PV+ D KLVG+++ D+L
Sbjct: 5 DVMT--EDVIFIELPNTRDKVIELFKKHGISAVPVVKDG-KLVGIITRKDIL-------- 53
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
K V LMTP P V +T+L++ AR+LL+T
Sbjct: 54 -------------------------RKVEEDQVAFLMTPNPTTVTPDTDLKEVARILLDT 88
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVR 221
+RRLPVV+ GKLVG+IT +++
Sbjct: 89 HFRRLPVVEN-GKLVGIITVRDIIE 112
>gi|443476949|ref|ZP_21066828.1| Cl- channel voltage-gated family protein [Pseudanabaena biceps PCC
7429]
gi|443018010|gb|ELS32338.1| Cl- channel voltage-gated family protein [Pseudanabaena biceps PCC
7429]
Length = 623
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 19/147 (12%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
+ + + + V E ++ R GFPV+ DD +VG+++ DL+ Q
Sbjct: 443 QRQVETLNSEMLVTEVMQSFARSRHRGFPVMSDD-HVVGIITQMDLVKF-------QEQN 494
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
L N++ + + +S+ N KV G +MT P+ V L LL K RL
Sbjct: 495 ILSKNIS------ENISKNISE-NIKV-GQIMTKNPITVSPEERLSQVLYLLSYYKLSRL 546
Query: 202 PVVDGYGKLVGLITRGNVVRAALQIKR 228
PV+D Y KLVG+ITR +++RA Q KR
Sbjct: 547 PVIDRY-KLVGIITRSDILRA--QAKR 570
>gi|288929624|ref|ZP_06423468.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
gi|288329129|gb|EFC67716.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
Length = 494
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 33/131 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV +AL+ + + I G PV+D+D LVG+V++ DL
Sbjct: 110 TVKDALDMMRDYHIGGIPVVDEDNCLVGIVTNRDL------------------------- 144
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ L K + ++MT LVV H+ T+L AA++L E K +LPVVD ++V
Sbjct: 145 ---RFEHRLDKK----IDEVMTSENLVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIV 197
Query: 212 GLITRGNVVRA 222
GLIT ++ +A
Sbjct: 198 GLITYKDITKA 208
>gi|385260148|ref|ZP_10038297.1| CBS domain protein [Streptococcus sp. SK140]
gi|385192068|gb|EIF39478.1| CBS domain protein [Streptococcus sp. SK140]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D KLVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPV+D G++ G+IT +V RA L+I GE
Sbjct: 103 KNKIGILPVIDN-GQVYGVITDRDVFRAFLEISGYGEE 139
>gi|422855005|ref|ZP_16901663.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|422861990|ref|ZP_16908622.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|422864959|ref|ZP_16911584.1| CBS domain protein [Streptococcus sanguinis SK1058]
gi|327462982|gb|EGF09303.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|327474585|gb|EGF19990.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|327490143|gb|EGF21931.1| CBS domain protein [Streptococcus sanguinis SK1058]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD +L G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQLYGVITDRDIFKAFLEVSGYGEE 139
>gi|76800670|ref|YP_325678.1| metalloprotease [Natronomonas pharaonis DSM 2160]
gi|76556535|emb|CAI48106.1| probable metalloprotease [Natronomonas pharaonis DSM 2160]
Length = 396
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 32/156 (20%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT ++ V+TT T+D L+R+ E+R TG+PV++ KLVG+V+ D+
Sbjct: 261 VADVMTPANEVRTVETTATLDAILDRMFEERHTGYPVVEGG-KLVGIVTLADI------- 312
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
NV+ K + V D+M+ V +T DA R L
Sbjct: 313 ----------RNVHP------------EKRSETRVADVMSEDLEAVSPDTEAMDAMRQLA 350
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRA--ALQIKR 228
+ RL V D +G L GL+TR ++V A +Q KR
Sbjct: 351 QHSVGRLVVTDEFGNLAGLLTRSDLVTAMNVVQEKR 386
>gi|262197635|ref|YP_003268844.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262080982|gb|ACY16951.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
14365]
Length = 640
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 26/152 (17%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R+G TVG FM+ DL V VD A + + I PV DD LVG+++ LL
Sbjct: 500 RHGYRTVGQFMST--DLFTVHPEDLVDLAASVMDWEHIRHVPVEDDHGSLVGIITHRTLL 557
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
L + G N L+ ++ V D+M AP+ V +T D
Sbjct: 558 RLMARRGTN-----------------------LAASSPVAVRDIMRVAPVTVSPDTLTID 594
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
A R++ E K LPVVDG KLVG+IT +++
Sbjct: 595 AIRMMREQKIGCLPVVDG-DKLVGIITESDLL 625
>gi|424918521|ref|ZP_18341885.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854697|gb|EJB07218.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 226
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 14/146 (9%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT + +++ T +V A+ +++ ++G PV+DD ++ G++++ DLL I
Sbjct: 5 DIMTTS--VVSIRPTVSVRHAVSVMMQANVSGLPVVDDGGRVCGMLTEGDLLLRREIRAT 62
Query: 137 NQNDTSLFPNVNSTWKTFNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
++ + + +E L+R + TNG V D+M+P +V ++ + D A L
Sbjct: 63 TRS--------SRAGEIISEIDLERYIC-TNGWSVADVMSPDVIVATPDSEVSDIAESLQ 113
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVV 220
+ +RLP+V+ G+LVG+++R +++
Sbjct: 114 AHRIKRLPIVED-GRLVGIVSRRDIL 138
>gi|422875867|ref|ZP_16922337.1| CBS domain protein [Streptococcus sanguinis SK1056]
gi|332362303|gb|EGJ40103.1| CBS domain protein [Streptococcus sanguinis SK1056]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD +L G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQLYGVITDRDIFKAFLEVSGYGEE 139
>gi|317151879|ref|YP_004119927.1| hypothetical protein Daes_0154 [Desulfovibrio aespoeensis Aspo-2]
gi|316942130|gb|ADU61181.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 224
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 17/121 (14%)
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN 165
I+ PV+D+ ++ G+VSD D+ D S P+ +T +EL LLS+
Sbjct: 32 ISRLPVVDESGRIAGIVSDRDI-----------KDAS--PS-KATTLDMHELYYLLSEVK 77
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
K D+MT + ++ +E AA L+LE + LPVVDG GK+VG+IT ++ + ++
Sbjct: 78 IK---DIMTKKVTTIRDDETVEKAAVLMLEGNFGGLPVVDGDGKVVGIITDTDIFKVLVE 134
Query: 226 I 226
I
Sbjct: 135 I 135
>gi|255021198|ref|ZP_05293248.1| CBS domain containing membrane protein [Acidithiobacillus caldus
ATCC 51756]
gi|254969313|gb|EET26825.1| CBS domain containing membrane protein [Acidithiobacillus caldus
ATCC 51756]
Length = 161
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 64 NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
+ P T MT+ E +H V V +RL+E PV+D D ++VG++
Sbjct: 2 TAAPGTAAPKTAATIMTR-EVVH-VAEGDDVQVVAKRLLESGHHSLPVLDQDGRVVGMIG 59
Query: 124 DYDLLALDSISGGNQ----NDTSLFPNVN--STWKTFNELQRLLSKTNGKVVGDLMTPAP 177
+ DL I Q SL +V S W+ + E R K L TP P
Sbjct: 60 ERDL-----IDAHRQIHLPTVLSLLDSVIPISGWREYEEELR---KATAVTALQLATPKP 111
Query: 178 LVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
V H ++E A +L+ LPVVD G L+G+++R +++RA +Q
Sbjct: 112 EVAHLGDSVESLADRILKRNLHALPVVDDGGHLLGIVSRSDILRALIQ 159
>gi|297560079|ref|YP_003679053.1| hypothetical protein Ndas_1105 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844527|gb|ADH66547.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 228
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+TV D MT ++ +V T E E LV ++ PV + + +VGVVSD DLL +
Sbjct: 2 HTVSDVMTT--EVFSVTGDTGYREIAEMLVTHGVSALPVTNGEGCVVGVVSDEDLLHKEE 59
Query: 133 ISGGNQNDTSLFPNVNSTWKT-FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+GG+ P + + + K + +LMT + V + ++ AAR
Sbjct: 60 FTGGD-----YAPPLRARLRARLGSGGSAGDKATARNAAELMTGPAVTVSSDASVVLAAR 114
Query: 192 LLLETKYRRLPVVDGYGKLVGLITR 216
L+ ++LPVVDG G L+G+++R
Sbjct: 115 LMERHGVKQLPVVDGDGHLLGIVSR 139
>gi|125718523|ref|YP_001035656.1| hypothetical protein SSA_1724 [Streptococcus sanguinis SK36]
gi|125498440|gb|ABN45106.1| CBS domain protein, putative [Streptococcus sanguinis SK36]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD +L G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQLYGVITDRDIFKAFLEVSGYGEE 139
>gi|422882791|ref|ZP_16929247.1| CBS domain protein [Streptococcus sanguinis SK355]
gi|332358281|gb|EGJ36107.1| CBS domain protein [Streptococcus sanguinis SK355]
Length = 218
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD +L G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQLYGVITDRDIFKAFLEVSGYGEE 139
>gi|225012062|ref|ZP_03702499.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
gi|225003617|gb|EEG41590.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
Length = 154
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 26/154 (16%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + L K T+ +E ++ RI+G PV++++ LVGV+S+ D + S
Sbjct: 22 TVSDIMTHQ--LIVFKPEDTIHVVMEAFIKNRISGGPVVNEEGDLVGVISEADCMKEISD 79
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
S + FN +L K+ V MT + N ++ DAA L
Sbjct: 80 S-----------------RYFN--MPILDKS----VSYFMTKKVDTIESNMSVFDAAALF 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
++ RR PV+ G +LVG ++R ++V AAL +K
Sbjct: 117 SKSSRRRYPVMKG-NRLVGQVSRKDIVIAALNMK 149
>gi|386814873|ref|ZP_10102091.1| CBS domain containing membrane protein [Thiothrix nivea DSM 5205]
gi|386419449|gb|EIJ33284.1| CBS domain containing membrane protein [Thiothrix nivea DSM 5205]
Length = 149
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT ++ K T V + +E + +I+G PV+DD+ +VGVVS+ D+L
Sbjct: 3 VKDIMT--TNVKTAKADTPVRDIVEVMCFNKISGLPVVDDNNNVVGVVSEKDVL------ 54
Query: 135 GGNQNDTSLFPNVNSTWKT-----FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+FP+++ + F ++++ S GD+M+ + + A
Sbjct: 55 ------RKMFPDISDVAREEGAPDFEKMEKDYSDALMLKTGDIMSKLVASASPDMPVMKA 108
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L+ K RR+PVV G KL+G+I+ G+V +A
Sbjct: 109 VSLMCVQKIRRIPVVQGT-KLMGIISLGDVHKA 140
>gi|365875256|ref|ZP_09414785.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442588350|ref|ZP_21007162.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
gi|365756904|gb|EHM98814.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442562055|gb|ELR79278.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
Length = 486
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 31/123 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ EA + +I+G PV+D+D KL+G++++ D+ Q D L
Sbjct: 108 TLGEAKGMMAHYKISGLPVVDNDNKLIGIITNRDV--------KYQEDLGL--------- 150
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
+++ +++K N +V H++T LE+A +LL+++ +LP+VD KLVG
Sbjct: 151 ---KVEEIMTKDN-----------LIVSHKSTTLEEAKEILLKSRVEKLPIVDSENKLVG 196
Query: 213 LIT 215
LIT
Sbjct: 197 LIT 199
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
V + MTK ++L +TT++EA E L++ R+ P++D + KLVG+++ D+
Sbjct: 152 VEEIMTK-DNLIVSHKSTTLEEAKEILLKSRVEKLPIVDSENKLVGLITIKDI 203
>gi|145225485|ref|YP_001136163.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium gilvum
PYR-GCK]
gi|315445838|ref|YP_004078717.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium gilvum Spyr1]
gi|145217971|gb|ABP47375.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium gilvum
PYR-GCK]
gi|315264141|gb|ADU00883.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium gilvum Spyr1]
Length = 517
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 64/218 (29%)
Query: 29 LPITVATPSHLSKRLRF-----------FTVSREVKAFAH-NGVGITNSVPP-------- 68
+P T T S L++R+R T SR A A G+G+ + P
Sbjct: 44 IPATADTSSQLTRRIRLKVPLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQV 103
Query: 69 ----RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124
R+ V D +T + T VD R RI+G PV+DD LVG++++
Sbjct: 104 ETVKRSEAGMVTDPVTCSPE----NTLAEVDAMCARF---RISGLPVVDDKGSLVGIITN 156
Query: 125 YDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHEN 183
D+ F Q K V ++MT APL+ E
Sbjct: 157 RDM-------------------------RFEVDQS-------KPVAEVMTKAPLITAQEG 184
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ E A LL K +LP+VDG+GKL GLIT + V+
Sbjct: 185 VSAEAALGLLRRNKIEKLPIVDGHGKLTGLITVKDFVK 222
>gi|402495573|ref|ZP_10842297.1| Inosine monophosphate dehydrogenase-related protein [Aquimarina
agarilytica ZC1]
Length = 155
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 33/174 (18%)
Query: 60 VGITNSV----PPRNG---TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVI 112
+GI+N + P+ G V D+MTKK L + T+ E +E LV ITG PV+
Sbjct: 1 MGISNFMGERAKPKKGIDAAIAVSDYMTKK--LISFTPQQTLLETMETLVRNEITGGPVV 58
Query: 113 DDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDL 172
+D L+G++S+ D + +D+ F ST ++V
Sbjct: 59 NDKGVLIGMISESDCMK-------QLSDSRYFNMPMST----------------EIVEKY 95
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
M+ + + ++ +AA ++ Y+R PV++G KLVG I++ +++ AAL +
Sbjct: 96 MSTIVETIDSSASIFEAAEQFHKSPYKRFPVLEG-SKLVGQISQHDIILAALHL 148
>gi|269925732|ref|YP_003322355.1| hypothetical protein Tter_0615 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789392|gb|ACZ41533.1| protein of unknown function DUF190 [Thermobaculum terrenum ATCC
BAA-798]
Length = 426
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 12/142 (8%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLF-P 145
++ ++ + +A+E L + PVID++ ++GV++ DL+ NQ + P
Sbjct: 131 SINVSSPIVDAIELLYNQVFKALPVIDNEKHVLGVITSSDLV--------NQGILPFYLP 182
Query: 146 NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
++ KT + + L +K V +M+ + ++++ ++AA L+ K +RLPVVD
Sbjct: 183 LLD---KTDVDKKDLHNKAYNSSVSSVMSKPAVTINQDATAQEAANLMASKKIKRLPVVD 239
Query: 206 GYGKLVGLITRGNVVRAALQIK 227
KLVG+++R +++ AA+ K
Sbjct: 240 DQDKLVGIVSRVDILAAAMHTK 261
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 16/143 (11%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+ T EA + K+I PV+DD KLVG+VS D+LA + + D +
Sbjct: 214 INQDATAQEAANLMASKKIKRLPVVDDQDKLVGIVSRVDILAAAMHTKAREEDLKPPSQI 273
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+S+ K V D+M V + D + LLE+ RL VVD
Sbjct: 274 SSSTK----------------VSDIMHTQVPTVDLGAPILDVVKGLLESPIHRLIVVDEQ 317
Query: 208 GKLVGLITRGNVVRAALQIKRDG 230
K+ G+I +++ A R G
Sbjct: 318 NKVKGIIGSSDLMNAVSSHNRAG 340
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS--LFPNVNSTWKTFNELQ 158
L+E I V+D+ K+ G++ DL+ +++S N+ L + ++ ++
Sbjct: 303 LLESPIHRLIVVDEQNKVKGIIGSSDLM--NAVSSHNRAGIMEILRAQILRDERSMEHIR 360
Query: 159 RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGN 218
++ ++T D+M + + + ++ AA L+++ + + LPVVD GKLVG+I R
Sbjct: 361 KIRART----AEDIMNREVVCISADADISSAAELMVKQRKKILPVVDDSGKLVGVIARDE 416
Query: 219 VV 220
++
Sbjct: 417 IL 418
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+ ++MTP P+ ++ ++ + DA LL ++ LPV+D ++G+IT ++V
Sbjct: 121 IKEIMTPNPISINVSSPIVDAIELLYNQVFKALPVIDNEKHVLGVITSSDLV 172
>gi|209544346|ref|YP_002276575.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532023|gb|ACI51960.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
Length = 236
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 84/147 (57%), Gaps = 14/147 (9%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL---ALDSISG-GNQNDTS 142
V++T ++ +A+ ++ R++ PV+ ++ LVGVV++ DL+ L++ SG G D
Sbjct: 13 CVESTRSLADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMRRSELETRSGHGWLGD-- 70
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
LF S+ + +E ++G+ V D+M+ P+ V T L DA +LL R LP
Sbjct: 71 LF---RSSGRQASEY----VHSHGRKVFDIMSDQPVSVEPGTVLRDAVEVLLLRNIRHLP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKRD 229
VV+ ++VG+++R +V+RA L + D
Sbjct: 124 VVEN-NRVVGMVSRTDVLRALLPLIAD 149
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
V D+MT + V +L DA L+L + LPVV G LVG++T G+++R + R
Sbjct: 3 VRDIMTSPAVCVESTRSLADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMRRSELETR 62
Query: 229 DG 230
G
Sbjct: 63 SG 64
>gi|328951634|ref|YP_004368969.1| hypothetical protein Marky_2136 [Marinithermus hydrothermalis DSM
14884]
gi|328451958|gb|AEB12859.1| CBS domain containing membrane protein [Marinithermus
hydrothermalis DSM 14884]
Length = 149
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA-LDSISGGNQNDTSLFPN 146
V+ + EA + ++ R G PV+D + +LVG+V DLL + ++ + LF
Sbjct: 8 VRADVPLLEAAQLMLRNRFGGLPVVDAEGRLVGLVEVEDLLPRMSAVPFSDVRAMRLF-- 65
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
W +L L + V + V+H + L+ A + E ++RR+PVVD
Sbjct: 66 --DEWVD-RDLAELYEELRQVPVAKALRKDVEVLHPDDPLDQALDRMAENRFRRMPVVDE 122
Query: 207 YGKLVGLITRGNVVRAALQI 226
G+LVG++TR + +R L++
Sbjct: 123 TGRLVGILTRSDFLRLMLEL 142
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
MTP PL V + L +AA+L+L ++ LPVVD G+LVGL+
Sbjct: 1 MTPNPLTVRADVPLLEAAQLMLRNRFGGLPVVDAEGRLVGLV 42
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN 137
++D+ + +D+AL+R+ E R PV+D+ +LVG+++ D L L GG
Sbjct: 90 RKDVEVLHPDDPLDQALDRMAENRFRRMPVVDETGRLVGILTRSDFLRLMLELGGR 145
>gi|427430313|ref|ZP_18920167.1| CBS domain containing membrane protein [Caenispirillum salinarum
AK4]
gi|425878773|gb|EKV27484.1| CBS domain containing membrane protein [Caenispirillum salinarum
AK4]
Length = 148
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 29/154 (18%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V + M+K D+H V TT+ E +R+ ++ I FPV ++D KL+GVV+D D+ +
Sbjct: 4 TMNVSEIMSK--DVHLVDPNTTIRECAKRMRDEDIGAFPVGEND-KLIGVVTDRDI-TVR 59
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
++G DT L + V D M+ L ++ ++E AA+
Sbjct: 60 CVAG----DTDL---------------------SSATVRDAMSEGVLWCFDDDDVEKAAK 94
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ E + RR+PV++ ++ G++T ++ +A ++
Sbjct: 95 SMAEHQIRRMPVINHDKRMCGVVTVADLAKAGVE 128
>gi|294053802|ref|YP_003547460.1| putative signal transduction protein [Coraliomargarita akajimensis
DSM 45221]
gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
[Coraliomargarita akajimensis DSM 45221]
Length = 151
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P N V K +H V TV EA+ + +RI V DD + G+ ++ D+
Sbjct: 2 PLNKVSVVSILKEKSSSVHCVAEQVTVAEAVNEMNRQRIGSILVKADDGTVTGIFTERDV 61
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L +G + T V ++MTP + +T++E
Sbjct: 62 LVRVVSAGRDPQATK--------------------------VQEVMTPDFESIAPDTSVE 95
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
DA +L+ E + R LP++DG G L G+I+ G+V R LQ+
Sbjct: 96 DAMQLMTEQRVRHLPILDG-GTLCGMISIGDVTRWLLQV 133
>gi|414152863|ref|ZP_11409190.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455245|emb|CCO07092.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 148
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS-----ISGG 136
K D+ V T + + + L +K I+G PV++ + KLVG+V++ DLL ++ G
Sbjct: 8 KTDVITVTADTNIKDIAQILTDKGISGVPVVNQEGKLVGIVTEGDLLHKEANPRIPKFFG 67
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
F V+ + F +L L + ++MT + V + T++ A L++E
Sbjct: 68 ILGAMIYFGGVDQYREDFKKLAALKA-------SEIMTSEVITVSKETDIRTIATLMIEH 120
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+R+PVV+ GK++G+++R ++++ Q
Sbjct: 121 NIKRIPVVEN-GKVLGIVSRSDIIKTLTQ 148
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
D+M + V +TN++D A++L + +PVV+ GKLVG++T G+++
Sbjct: 5 DIMKTDVITVTADTNIKDIAQILTDKGISGVPVVNQEGKLVGIVTEGDLL 54
>gi|254393775|ref|ZP_05008892.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294814613|ref|ZP_06773256.1| CBS domain containing membrane protein [Streptomyces clavuligerus
ATCC 27064]
gi|326442999|ref|ZP_08217733.1| hypothetical protein SclaA2_18128 [Streptomyces clavuligerus ATCC
27064]
gi|197707379|gb|EDY53191.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294327212|gb|EFG08855.1| CBS domain containing membrane protein [Streptomyces clavuligerus
ATCC 27064]
Length = 210
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 31/142 (21%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT +V+ T E L E IT PV+D+D + VGVVS+ DLL
Sbjct: 6 VADLMTPV--AVSVQRGTAFKEIARLLDEYGITAVPVVDEDERPVGVVSEADLL------ 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+R S+T LMT +V ++ AAR++
Sbjct: 58 -----------------------RRQTSRTTAGTAEGLMTSPAIVAEPEWSVVRAARVME 94
Query: 195 ETKYRRLPVVDGYGKLVGLITR 216
E + +RLPVVDG G+L G+++R
Sbjct: 95 EKRIKRLPVVDGEGRLTGVVSR 116
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
V DLMTP + V T ++ ARLL E +PVVD + VG+++ +++R
Sbjct: 6 VADLMTPVAVSVQRGTAFKEIARLLDEYGITAVPVVDEDERPVGVVSEADLLR 58
>gi|167629788|ref|YP_001680287.1| cbs domain [Heliobacterium modesticaldum Ice1]
gi|167592528|gb|ABZ84276.1| cbs domain [Heliobacterium modesticaldum Ice1]
Length = 151
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 25/159 (15%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD-- 131
T + M++ +++ V T V + ++ ++EKRI+G PVI ++G++S+ DLL D
Sbjct: 2 TASEIMSR--EVYTVYPDTPVADVVKLMIEKRISGVPVISRQGDVIGIISEGDLLFKDKD 59
Query: 132 -------SISGGNQNDTSLFPNVNSTWKTFNELQRLLS-KTNGKVVGDLMTPAPLVVHEN 183
S+ GG + S + E ++ ++ + + GD++T V E
Sbjct: 60 LRYPSFISLLGG-------MIYLESPKRFAEEFRKSIALRAEEIMTGDVIT-----VEEE 107
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + A L+ E + RLPV+ GKLVG++TR +++RA
Sbjct: 108 ARVSEMAGLMTEQQVNRLPVLRN-GKLVGIVTRADILRA 145
>gi|433461426|ref|ZP_20419036.1| thioesterase family protein [Halobacillus sp. BAB-2008]
gi|432190253|gb|ELK47296.1| thioesterase family protein [Halobacillus sp. BAB-2008]
Length = 437
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 33/154 (21%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D T ED +KTT +VD + E + + +PV+D ++VG+V+ D++
Sbjct: 191 VDDIYTAYEDSKFLKTTDSVDHWHDLNEETKHSRYPVVDSQNRVVGIVTSKDVI------ 244
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G DT + +MT P+ VH T+L +AA +++
Sbjct: 245 -GKSADTK--------------------------IDKVMTKNPMTVHPKTSLANAAHVMV 277
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+PVVD KL G+I+R +V++A I+R
Sbjct: 278 WEGIELMPVVDAAQKLQGIISRQDVLKALQHIQR 311
>gi|156743706|ref|YP_001433835.1| hypothetical protein Rcas_3778 [Roseiflexus castenholzii DSM 13941]
gi|156235034|gb|ABU59817.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 225
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 26/165 (15%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M+ + + TTT+ EA + ++RI PV+++ KL+G+++ DL A
Sbjct: 6 VADWMSTPAIV--IAPTTTLAEAQRLMEQRRIRRLPVVENG-KLIGIITRGDLRA----- 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
DT+L ++ E + LL + V + MT + + + + DAARL+L
Sbjct: 58 -AQPADTTL---------SYYEWRALLDRVT---VVECMTRHVVTITPDASALDAARLML 104
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI-----KRDGERST 234
K LPVVD G+++G+IT ++ R + + RD ER T
Sbjct: 105 TYKIGGLPVVDDEGRVIGIITESDLFRLQIALATGGEARDAERPT 149
>gi|291287158|ref|YP_003503974.1| hypothetical protein Dacet_1246 [Denitrovibrio acetiphilus DSM
12809]
gi|290884318|gb|ADD68018.1| CBS domain containing membrane protein [Denitrovibrio acetiphilus
DSM 12809]
Length = 137
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTSLFPNVNSTW 151
T+ + + ++ +K ++G PV+D + K++ S+ D+ AL I N+ P V+
Sbjct: 19 TIKDVILKMRKKNVSGLPVVDKNNKVLATFSETDVAKALPDI----LNEAQYIPLVDVRE 74
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
T ++R++ PA + +TN+ +AAR++LE RLPVVD G L+
Sbjct: 75 LTSEPIKRVME-----------IPA-YSIKADTNVTEAARIVLEKFRHRLPVVDDAGHLI 122
Query: 212 GLITRGNVVRAAL 224
GL+T G++++A L
Sbjct: 123 GLVTLGDILKALL 135
>gi|116249487|ref|YP_765325.1| hypothetical protein pRL90028 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254135|emb|CAK03738.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 214
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
+++ +I+G PV+D + LVG+VSD D L ++ + + L + S K +E R
Sbjct: 1 MLDNKISGLPVVDANGALVGIVSDGDFLRRSELN-TERKRSWLLEWLTSPGKIADEYVR- 58
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+G+ V ++MT + ++ DA RL+ +RLPVV G+LVG++ R +++
Sbjct: 59 ---AHGRRVEEVMTAPVSAIAPTASISDAVRLMERRDIKRLPVVTD-GRLVGIVARSDLL 114
Query: 221 RAALQ 225
RA Q
Sbjct: 115 RALSQ 119
>gi|448589429|ref|ZP_21649588.1| metalloprotease [Haloferax elongans ATCC BAA-1513]
gi|445735857|gb|ELZ87405.1| metalloprotease [Haloferax elongans ATCC BAA-1513]
Length = 395
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT EDL V+ T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 253 VVRDIMTGSEDLDVVEEQTSVAELLERMFVERHTGYPVLRNG-NLVGMVT------LDDA 305
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + V D+M+ + + + DA L+
Sbjct: 306 ------------------RSIREVER-----DAYRVDDIMSDELATIDPDADAMDAIALM 342
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G LVGL++R ++V A I+ G
Sbjct: 343 QERGVGRLPVVDEQGDLVGLVSRSDLVTAFNIIRSRG 379
>gi|239908873|ref|YP_002955615.1| hypothetical protein DMR_42380 [Desulfovibrio magneticus RS-1]
gi|239798740|dbj|BAH77729.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 220
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+M+K K TT++ +A + + E PV+DDD +LVG+++D D+
Sbjct: 3 IKDWMSKTP--VTAKATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDV------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ VGD+MT + V + +E AA L+L
Sbjct: 54 ------KEASPS-KATTLDMHELYYLLSEIK---VGDIMTKTVISVSPDDTVEKAAVLML 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+PVVD G +VG+IT ++ + + I
Sbjct: 104 RHNVGGMPVVDAKGLVVGVITDSDIFKVLVSI 135
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D M+ P+ T++ AA+L+ E Y RLPVVD G+LVG+IT +V A+
Sbjct: 2 LIKDWMSKTPVTAKATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDVKEAS 57
>gi|452853043|ref|YP_007494727.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451896697|emb|CCH49576.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 224
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 17/124 (13%)
Query: 103 EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLS 162
+K I+ PV+D++ K+VG+VSD D+ D S P+ +T +EL LLS
Sbjct: 29 DKIISCVPVVDENGKIVGIVSDRDI-----------KDAS--PS-KATTLDMHELYYLLS 74
Query: 163 KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ K D+MT + E+ +E AA L+LE ++ LPVVD +VG+IT +V +
Sbjct: 75 EIKIK---DIMTKKVTTIREDETVEKAAVLMLEGRFGSLPVVDENNVVVGIITDTDVFKV 131
Query: 223 ALQI 226
++I
Sbjct: 132 LVEI 135
>gi|411006638|ref|ZP_11382967.1| hypothetical protein SgloC_27880 [Streptomyces globisporus C-1027]
Length = 225
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + MT D+ + T+ + E ++ PV+D + +L+G+VS+ DLL
Sbjct: 5 TVFEVMT--HDVVTATSQTSFKQIARLFAEHDVSAVPVVDPERRLLGLVSEADLL----- 57
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNG----KVVGDLMTPAPLVVHENTNLEDA 189
T+ P++ RLLS+ G + LMT + N NL +
Sbjct: 58 -----RATAELPDLEGRPAGV----RLLSQERGLPAAETAAQLMTSPAVTAQPNWNLVET 108
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AR + +RLPV D G+LVG+I+R +++R L+
Sbjct: 109 ARTMHRKGVKRLPVTDETGRLVGIISRSDLLRPFLR 144
>gi|227545976|ref|ZP_03976025.1| efflux transporter protein [Bifidobacterium longum subsp. longum
ATCC 55813]
gi|227213610|gb|EEI81459.1| efflux transporter protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|390935988|ref|YP_006393547.1| putative transporter [Bifidobacterium bifidum BGN4]
gi|389889601|gb|AFL03668.1| putative transporter [Bifidobacterium bifidum BGN4]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|322391656|ref|ZP_08065124.1| CBS domain protein [Streptococcus peroris ATCC 700780]
gi|321145467|gb|EFX40860.1| CBS domain protein [Streptococcus peroris ATCC 700780]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + T V A + + E+ + PVI++D KLVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTNVAHAADLMREQGLHRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD G+L G+IT +V RA L+I GE
Sbjct: 103 KNKIGILPVVDN-GQLYGVITDRDVFRAFLEIAGYGEE 139
>gi|311063535|ref|YP_003970260.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
gi|310865854|gb|ADP35223.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|294496296|ref|YP_003542789.1| XRE family transcriptional regulator [Methanohalophilus mahii DSM
5219]
gi|292667295|gb|ADE37144.1| putative transcriptional regulator, XRE family [Methanohalophilus
mahii DSM 5219]
Length = 154
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI-SGGNQNDTSLFPNVNSTWK 152
V +A L + I+G PV+D+ +VG++S+ DLLAL I G+ S F + +
Sbjct: 20 VSDAARSLKDNDISGMPVVDNG-NIVGILSEVDLLALLEIPEHGDFWLPSPFEVIEIPIR 78
Query: 153 TF---NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209
F + +++LS V +M V ++EDA+ L+ K RLPVV+ K
Sbjct: 79 EFISWEDTKKMLSDVGSMPVSKIMRYGVFTVSPEDSIEDASHLMSRHKINRLPVVEN-DK 137
Query: 210 LVGLITRGNVVRA 222
L G+ITRG+++R
Sbjct: 138 LTGIITRGDIIRG 150
>gi|217977212|ref|YP_002361359.1| hypothetical protein Msil_1028 [Methylocella silvestris BL2]
gi|217502588|gb|ACK49997.1| CBS domain containing membrane protein [Methylocella silvestris
BL2]
Length = 226
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 80/150 (53%), Gaps = 16/150 (10%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M + D+ V + A+ LV+ ++ PV+D D ++VGV+S+ DLL
Sbjct: 5 DVMVR--DVVTVGPDDEIAAAVRLLVDHDVSALPVVDADGRVVGVLSEADLLF------- 55
Query: 137 NQNDTSLFPNVNSTW----KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ D + P +S W + L + +K +G+ V ++M+ + + +L D A L
Sbjct: 56 REEDGTAQP--HSWWVEALTPASILAQQFAKEHGRKVSEVMSSEVISAPADASLADIAHL 113
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L + + +R+P++ GKLVG+++R N+++A
Sbjct: 114 LEKRRIKRVPIITD-GKLVGIVSRSNIMQA 142
>gi|303247748|ref|ZP_07334017.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
gi|302490832|gb|EFL50731.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 23/154 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVD--EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
VGD+M++ + V T V +A + E +I PV+D D KL+G+VS+ DL A
Sbjct: 3 VGDWMSR----NVVTATGDVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVSERDLKA--- 55
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ TSL EL LLS+ V ++MT +P + +E AA +
Sbjct: 56 --ASPSDATSL---------DMYELTYLLSEMK---VKNIMTKSPRFIRPTDTVERAALI 101
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ + K LPV+D GK++G+IT ++ R + I
Sbjct: 102 MRDLKIGSLPVIDADGKVLGIITDTDIFRLFVSI 135
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+VGD M+ + + ++ A R++ E K RRLPVVD GKL+G+++ ++ A+
Sbjct: 2 LVGDWMSRNVVTATGDVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVSERDLKAAS 57
>gi|404485708|ref|ZP_11020905.1| inosine-5'-monophosphate dehydrogenase [Barnesiella
intestinihominis YIT 11860]
gi|404338396|gb|EJZ64843.1| inosine-5'-monophosphate dehydrogenase [Barnesiella
intestinihominis YIT 11860]
Length = 490
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 33/136 (24%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+K +TV EAL + E I G PV+DD LVG+V++ DL
Sbjct: 104 IKCGSTVREALSMMSEYHIGGIPVVDDKNLLVGIVTNRDL-------------------- 143
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARLLLETKYRRLPVVDG 206
+ +L+RL V ++MT LV ++T+L+ AA +L K +LPVVD
Sbjct: 144 ----RFERDLERL--------VDEVMTKDNLVTTSQSTDLQQAADILQRHKIEKLPVVDK 191
Query: 207 YGKLVGLITRGNVVRA 222
G LVGL+T ++ +A
Sbjct: 192 DGHLVGLVTYKDITKA 207
>gi|310286641|ref|YP_003937899.1| multidrug resistance transporter [Bifidobacterium bifidum S17]
gi|309250577|gb|ADO52325.1| multidrug resistance transporter, Major Facilitator Superfamily
[Bifidobacterium bifidum S17]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|119026509|ref|YP_910354.1| efflux transporter protein [Bifidobacterium adolescentis ATCC
15703]
gi|118766093|dbj|BAF40272.1| possible efflux transporter protein [Bifidobacterium adolescentis
ATCC 15703]
Length = 692
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 555 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 610
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 611 FDD-ETVASKVQALSGKKVMDIATHKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 669
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 670 VGVIRRKSVMEHAF 683
>gi|374630841|ref|ZP_09703226.1| putative signal transduction protein with CBS domains
[Methanoplanus limicola DSM 2279]
gi|373908954|gb|EHQ37058.1| putative signal transduction protein with CBS domains
[Methanoplanus limicola DSM 2279]
Length = 159
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN- 146
+ + V EA L +KRI G PV++ + +L G+V++ D+L+L + G+ +D P+
Sbjct: 14 ITVNSKVSEAAGILRKKRIGGLPVMNGE-RLAGIVTETDILSL--LDTGDLSDDLWLPSP 70
Query: 147 ---VNSTWKTF---NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
+ + F + ++ LS V D+M+ + + + ++EDAA L+L R
Sbjct: 71 LEIIEIPIREFINWEKTKKALSDIGDSPVSDIMSTEIVSIDDEADIEDAAGLMLSEGIAR 130
Query: 201 LPVVDGYGKLVGLITRGNVVRA 222
LPV+ +LVG+ITR ++VR
Sbjct: 131 LPVLK-QNRLVGIITRQDIVRG 151
>gi|313139333|ref|ZP_07801526.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313131843|gb|EFR49460.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 692
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 555 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 610
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 611 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 669
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 670 VGVIRRKSVMEHAF 683
>gi|296133844|ref|YP_003641091.1| hypothetical protein TherJR_2350 [Thermincola potens JR]
gi|296032422|gb|ADG83190.1| CBS domain containing membrane protein [Thermincola potens JR]
Length = 217
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 23/146 (15%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFP-NVNSTW 151
TV EALE + + + PV+D LVGV S+ DLL +FP N +
Sbjct: 19 TVGEALELIRQHDVRHLPVVDRKQHLVGVTSESDLL-------------KIFPRNKHDER 65
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
KTF LL +T + +M P P ++ + +E+AA L+ K LPV++ + K++
Sbjct: 66 KTFE--TNLLLRTP---ITQVMVPNPYHINPHITIEEAALLMKNHKIGCLPVIE-HSKVI 119
Query: 212 GLITRGNVVRA---ALQIKRDGERST 234
GLI+R +V+ A +L + + G R T
Sbjct: 120 GLISRTDVIEAFINSLGLGKSGVRVT 145
>gi|282164424|ref|YP_003356809.1| hypothetical protein MCP_1754 [Methanocella paludicola SANAE]
gi|282156738|dbj|BAI61826.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 159
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
V + MTK D+ + + VD ++ + EK I+G PV+D + K+VG+V++ D++ L
Sbjct: 1 MKVSEVMTK--DVITCRPSDPVDGVVKLMSEKDISGLPVVDGE-KVVGMVTEADIMRLLV 57
Query: 133 ISGGNQNDTSLFPN-----VNSTWKTFNELQRL---LSKTNGKVVGDLMTPAPLVVHENT 184
+ ++ T P+ + K +L+RL + G+ VG +M L + +
Sbjct: 58 VPEPSR--TLWMPSPLEVLIEIPLKEIIQLRRLQQSVKDAGGQNVGSIMQKDVLSISPDD 115
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
++EDAA +++ K RL VV GKLVG+ITR +++
Sbjct: 116 DIEDAASAMVKHKVNRL-VVLKDGKLVGIITRDDIIHG 152
>gi|260771378|ref|ZP_05880304.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613694|gb|EEX38887.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 18/159 (11%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R+ T MT + L +K T+ +ALE L + + T PV+DD+ +LVG+ S D
Sbjct: 216 RHQKLTCEHVMTSR--LITLKPNDTIHKALELLQQNQFTALPVVDDEHELVGIFSLVDF- 272
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
L S+ N + +F L K K V M AP+ + +T++
Sbjct: 273 -LRSVE-------------NRKFDSFIALYLQAKKKAMKEVSQFMNAAPVFMRTDTHIAR 318
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
LL + Y +P+VD +L G++T+ +++ IK
Sbjct: 319 TIP-LLTSGYHHIPIVDNRNRLKGMVTQSDLIEFLYNIK 356
>gi|23465493|ref|NP_696096.1| efflux transporter protein [Bifidobacterium longum NCC2705]
gi|322688919|ref|YP_004208653.1| transport protein [Bifidobacterium longum subsp. infantis 157F]
gi|23326150|gb|AAN24732.1| possible efflux transporter protein [Bifidobacterium longum
NCC2705]
gi|320460255|dbj|BAJ70875.1| putative transport protein [Bifidobacterium longum subsp. infantis
157F]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|284163584|ref|YP_003401863.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
gi|284013239|gb|ADB59190.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
Length = 393
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 34/165 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDW----KLVGVVSDYDLLA 129
TVGD MT DLH V+ TT+ E ++R+ +R TG+PVID D +LVG+V+ D
Sbjct: 251 TVGDIMTPAGDLHTVEPETTIAELVQRMFTERHTGYPVIDTDAFEGERLVGLVTLTDARE 310
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+D + + D V ST DL T P +++ A
Sbjct: 311 VDPV----ERDAFTVDEVMST--------------------DLKTITP-----DSDAMTA 341
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
+ E RL VVD G LVGLI+R +V+ A +++ G S+
Sbjct: 342 IEEMRENNIGRLLVVDD-GDLVGLISRSDVMTAFDIVQKSGAVSS 385
>gi|448462810|ref|ZP_21597869.1| peptidase M50 [Halorubrum kocurii JCM 14978]
gi|445818031|gb|EMA67899.1| peptidase M50 [Halorubrum kocurii JCM 14978]
Length = 394
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 30/161 (18%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT++E+LH V T+V + + R+ E+R TG+PV+ D LVG+V+ D
Sbjct: 249 TVADVMTRREELHTVSGGTSVADLMNRMFEERHTGYPVLHGD-DLVGMVTLEDA------ 301
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + V D+M + V T+ A + +
Sbjct: 302 ------------------RSVREVER-----DAYQVADVMETDLVGVGPETDAMTALQTM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
E RLPVVD +LVGLI+R +++ A I+ G S
Sbjct: 339 QENGVGRLPVVDRDNELVGLISRSDLMTAFNIIQTGGTPSV 379
>gi|269837219|ref|YP_003319447.1| hypothetical protein Sthe_1190 [Sphaerobacter thermophilus DSM
20745]
gi|269786482|gb|ACZ38625.1| CBS domain containing membrane protein [Sphaerobacter thermophilus
DSM 20745]
Length = 159
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 18/128 (14%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL-------FPNVNSTWKT 153
L + ++TG PV++ ++VGVV++YDL+A S + D L F V T
Sbjct: 31 LWKHKLTGVPVLEGR-RVVGVVTEYDLIARQS-----EWDAPLYVVFLDAFLRVPGTGDE 84
Query: 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGL 213
+L+R+L+ T G+ LM+ + + + ++DAA L+ E + +P+VD G+LVG+
Sbjct: 85 -EQLRRILATTAGQ----LMSAPAITLTPDATVQDAATLMYERRVNPVPIVDDAGELVGI 139
Query: 214 ITRGNVVR 221
++R ++VR
Sbjct: 140 VSRSDIVR 147
>gi|407478610|ref|YP_006792487.1| hypothetical protein Eab7_2799 [Exiguobacterium antarcticum B7]
gi|407062689|gb|AFS71879.1| CBS domain containing membrane protein [Exiguobacterium antarcticum
B7]
Length = 151
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 84/153 (54%), Gaps = 13/153 (8%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN 137
+ + KE + V T+ +ER + I+G PV++D ++VG +SD D++ + G +
Sbjct: 4 YQSMKETVITVNEQDTIRTVVERFITSGISGVPVVNDQQEVVGYISDGDIM---RVIGKH 60
Query: 138 QN---DTSLFPNV-NSTWKTFNE-LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
++ DT L+ +V K + E ++ +L++ V D+ + + T +E+ A
Sbjct: 61 KDIIVDTFLYVDVIKGDDKNYEERVRHILTRP----VMDMARRKVVTANVETEMEEIAAT 116
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L + ++LP++ GKLVG+I+RG+V+R + +
Sbjct: 117 LGAKRIKKLPILKD-GKLVGIISRGDVIRHSFK 148
>gi|395776820|ref|ZP_10457335.1| hypothetical protein Saci8_43913 [Streptomyces acidiscabies 84-104]
Length = 234
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + V+ T E + L E IT PV+DDD + VGVVS+ DLL ++
Sbjct: 6 VSDLMTTS--VVRVRRETGFKEIAKLLAEYDITAVPVVDDDDRPVGVVSEADLLRKEA-- 61
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G ++ T L P ++ +K LM + + +AA+++
Sbjct: 62 -GQRDPTGLLPVLHPRPTDR-------AKAEATTAEGLMNSPAVTARPQWTVVEAAQVME 113
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+RLPVVD +L+G+I+R +++R L+ R
Sbjct: 114 RHHVKRLPVVDEADRLLGVISRADLLRVFLRGDR 147
>gi|154487114|ref|ZP_02028521.1| hypothetical protein BIFADO_00954 [Bifidobacterium adolescentis
L2-32]
gi|154084977|gb|EDN84022.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium adolescentis L2-32]
Length = 692
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 555 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 610
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 611 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 669
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 670 VGVIRRKSVMEHAF 683
>gi|326792093|ref|YP_004309914.1| hypothetical protein Clole_3019 [Clostridium lentocellum DSM 5427]
gi|326542857|gb|ADZ84716.1| CBS domain containing membrane protein [Clostridium lentocellum DSM
5427]
Length = 150
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V+ +++ + L++ +I+G PV+D++ +LVGVVS+ DL+ + N +S +
Sbjct: 14 VRNEELLEDIINILMKHQISGVPVVDENNQLVGVVSEKDLMTKEK----GLNISSYIAFM 69
Query: 148 NSTW-----KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
S K E + +L T K V + TPA VHE +E+ L++ R+P
Sbjct: 70 TSILGIDGKKQLGESRAILQTTTAKEV--MSTPA-FAVHEEATIEEVVSLMMNRHINRIP 126
Query: 203 VVDGYGKLVGLITRGNVV 220
V++ KLVG+I R +++
Sbjct: 127 VINEDNKLVGIIGRTDLL 144
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
AV T++E + ++ + I PVI++D KLVG++ DLL L
Sbjct: 103 AVHEEATIEEVVSLMMNRHINRIPVINEDNKLVGIIGRTDLLPL 146
>gi|120402520|ref|YP_952349.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium vanbaalenii
PYR-1]
gi|119955338|gb|ABM12343.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium vanbaalenii
PYR-1]
Length = 517
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 89/218 (40%), Gaps = 64/218 (29%)
Query: 29 LPITVATPSHLSKRLRF-----------FTVSREVKAFAH-NGVGITNSVPP-------- 68
+P T T S L++++R T SR A A G+G+ + P
Sbjct: 44 IPATADTSSQLTRKIRLKVPLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQV 103
Query: 69 ----RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124
R+ V D +T D T VD R RI+G PV+DD LVG++++
Sbjct: 104 ETVKRSEAGMVTDPVTCSPD----NTLAEVDAMCARF---RISGLPVVDDRGSLVGIITN 156
Query: 125 YDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHEN 183
D+ + LSK V ++MT APL+ E
Sbjct: 157 RDM----------------------------RFEVDLSKP----VSEVMTKAPLITAQEG 184
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ E A LL K +LP+VDG+GKL GLIT + V+
Sbjct: 185 VSAEAALGLLRRNKIEKLPIVDGHGKLTGLITVKDFVK 222
>gi|421733867|ref|ZP_16172962.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
gi|407078240|gb|EKE51051.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
Length = 618
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 481 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 536
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 537 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 595
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 596 VGVIRRKSVMEHAF 609
>gi|384201729|ref|YP_005587476.1| transporter [Bifidobacterium longum subsp. longum KACC 91563]
gi|338754736|gb|AEI97725.1| transport protein [Bifidobacterium longum subsp. longum KACC 91563]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|291440953|ref|ZP_06580343.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
gi|291343848|gb|EFE70804.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
Length = 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + +V T E + + + ++ PV++D ++VGVVS+ DLL +
Sbjct: 3 HIVRDVMTRS--VVSVGRQTPFKEIVRLMRGRGVSALPVLEDGDRVVGVVSEADLLPKEE 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ P+ + + +L K +LMT + V L DAA L
Sbjct: 61 FRDSD-------PDRRTQRRRLPDLL----KAGALTAEELMTSPAVTVRAGVTLSDAAGL 109
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + +RLPVVDG G L G+++R +++ L+
Sbjct: 110 MTRHRVKRLPVVDGRGALEGVVSRADLLEVFLR 142
>gi|290955614|ref|YP_003486796.1| hypothetical protein SCAB_10531 [Streptomyces scabiei 87.22]
gi|260645140|emb|CBG68226.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 233
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 12/154 (7%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + V+ T E + L E IT PV+DDD + VGVVS+ DLL ++
Sbjct: 6 VSDLMTTS--VVRVRPDTGFKEIAKLLAEYDITAVPVVDDDDRPVGVVSEADLLRKEA-- 61
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ L P ++ K + + G LM + + +AA+++
Sbjct: 62 -AQLDPAGLLPVLHP--KPAARAKAEAATAEG-----LMNSPAVTAQPQWTVVEAAQVME 113
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+ +RLPVVD G+LVGLI+R +++R L+ R
Sbjct: 114 RHRVKRLPVVDEAGRLVGLISRADLLRVFLRGDR 147
>gi|57640129|ref|YP_182607.1| inosine 5'-monophosphate dehydrogenase [Thermococcus kodakarensis
KOD1]
gi|57158453|dbj|BAD84383.1| inosine-5'-monophosphate dehydrogenase [Thermococcus kodakarensis
KOD1]
Length = 486
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 34/139 (24%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ ++K ++D AL + + G PV+DD+ ++VGV++ D+ A
Sbjct: 101 EDVISIKPDESLDYALFLMERNGVDGLPVVDDEGRVVGVITKKDIAA------------- 147
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
G V ++MT + V E E+A +++ + + RLP
Sbjct: 148 ---------------------KQGSKVSEVMTGEVITVPETVTAEEAVQIMFDHRIDRLP 186
Query: 203 VVDGYGKLVGLITRGNVVR 221
VVDG G+LVG+IT ++ +
Sbjct: 187 VVDGEGRLVGIITMSDLAK 205
>gi|345852847|ref|ZP_08805772.1| hypothetical protein SZN_23651 [Streptomyces zinciresistens K42]
gi|345635710|gb|EGX57292.1| hypothetical protein SZN_23651 [Streptomyces zinciresistens K42]
Length = 233
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + +V+ T E + L E IT PV+DDD + VGVVS+ DLL ++
Sbjct: 6 VSDLMTTP--VVSVRRGTGFKEIAKLLAEHGITAVPVVDDDERAVGVVSEADLLRKEA-- 61
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ L P + R +K LM + +AA+++
Sbjct: 62 -AQLDPAGLLPVLRP-----GPTDR--AKARATTAEGLMNSPAVTARAQWTAVEAAQVME 113
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+RLPVVD G+LVGL++R +++R L+
Sbjct: 114 RHHVKRLPVVDEAGRLVGLVSRADLLRVFLR 144
>gi|372222662|ref|ZP_09501083.1| putative signal transduction protein with CBS domains
[Mesoflavibacter zeaxanthinifaciens S86]
Length = 160
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 26/152 (17%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT+K L + ++ E +E + I+G PV+DD LVG++S+ D + S S
Sbjct: 25 VSDYMTRK--LITFRPDQSILEVMESFAKYNISGGPVLDDSGFLVGIISEADCMKQISES 82
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ FN Q +L K+ V MT A + + + DAA + +
Sbjct: 83 -----------------RYFN--QPILDKS----VERFMTKAVETIPHDMTIFDAAGIFV 119
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
RRLPV++ G LVG I+R ++V AAL++
Sbjct: 120 RHNRRRLPVMNN-GLLVGQISRKDIVIAALKL 150
>gi|422884639|ref|ZP_16931087.1| CBS domain protein [Streptococcus sanguinis SK49]
gi|332359069|gb|EGJ36890.1| CBS domain protein [Streptococcus sanguinis SK49]
Length = 218
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + E+++ PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT VGD+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD ++ G+IT ++ +A L++ GE
Sbjct: 103 KNKIGILPVVDN-EQIYGVITDRDIFKAFLEVSGYGEE 139
>gi|229817773|ref|ZP_04448055.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785562|gb|EEP21676.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L SI+ ++ ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIA--TYESRTVPTGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|213692518|ref|YP_002323104.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|384199715|ref|YP_005585458.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|213523979|gb|ACJ52726.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|320458667|dbj|BAJ69288.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
Length = 683
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVTSKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|392546646|ref|ZP_10293783.1| CBS domain-containing protein [Pseudoalteromonas rubra ATCC 29570]
Length = 139
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 19/150 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT D AV T T+++A + EK I PVIDD+ LVG+++ ++A +
Sbjct: 4 TVADLMTP--DPLAVSETNTLNDAHNLMREKNIRHIPVIDDNGMLVGMLTQKIMIA--KV 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + +T+ T N L+R K + V ++M V +L++ R
Sbjct: 60 MG-----------IIATYGT-NALER---KEKQQQVAEVMATDFASVQPQQSLQEVVRFF 104
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ ++ +PV D GKL+G++T + VR A
Sbjct: 105 VDNRHGCMPVTDDNGKLLGILTSSDFVRLA 134
>gi|350560258|ref|ZP_08929098.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782526|gb|EGZ36809.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 160
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ D V T+V+ ++ LV+K I G PV+D+ +++G+V+ DL+
Sbjct: 3 VRDLMTR--DPVTVGPATSVEALIDLLVDKGINGLPVVDEFGRVLGMVTTGDLI------ 54
Query: 135 GGNQNDTSLFPNVNSTWK------TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
++ + P+ +S W+ F + G G +M+ P V + ++
Sbjct: 55 --HRVADAHVPSRDSIWRESLYKSVFRHDDSEPNPAEGVTAGAVMSRNPAYVLPSDDMAV 112
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
AARLL+E + + LPV+D +LVG+++R +++R
Sbjct: 113 AARLLIEHRVKSLPVLD-EERLVGMVSRLDLLRC 145
>gi|116747758|ref|YP_844445.1| hypothetical protein Sfum_0309 [Syntrophobacter fumaroxidans MPOB]
gi|116696822|gb|ABK16010.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 230
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 24/150 (16%)
Query: 89 KTTTTVDE------ALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
KT T++E A+ + E +I PV+ KLVGVVSD DL + +D
Sbjct: 9 KTVVTIEEDDSMQHAMSLMKEHKIRMLPVVAR-GKLVGVVSDTDL------KRASASD-- 59
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
+T +EL L+SK V D+MT P+ V +N +E+ A LL+ K P
Sbjct: 60 ------ATTLDMHELLYLISKIK---VQDIMTKTPITVSQNFTVEETAELLMRKKISGCP 110
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKRDGER 232
V+D G +VG+ITR ++ + + + G++
Sbjct: 111 VLDDDGLVVGVITRDDLFKVLIMLSGLGKK 140
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSI 133
V D MTK V TV+E E L+ K+I+G PV+DDD +VGV++ DL L +
Sbjct: 77 VQDIMTKTP--ITVSQNFTVEETAELLMRKKISGCPVLDDDGLVVGVITRDDLFKVLIML 134
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV 168
SG + L V + + ++ K +G++
Sbjct: 135 SGLGKKGIQLAFQVEDRSGSIKNITDVIRKYDGRI 169
>gi|336323149|ref|YP_004603116.1| hypothetical protein Flexsi_0886 [Flexistipes sinusarabici DSM
4947]
gi|336106730|gb|AEI14548.1| CBS domain containing membrane protein [Flexistipes sinusarabici
DSM 4947]
Length = 140
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 18/124 (14%)
Query: 100 RLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTSLFPNVNSTWKTFNELQ 158
+L +K +TG PV++ D ++VGV S+ D+L L I ND P V ++Q
Sbjct: 28 KLRKKNLTGLPVLNKDGEVVGVFSESDVLNQLPDI----LNDADKIPLV--------DVQ 75
Query: 159 RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGN 218
L + V ++M P+ V NL+D A++ LE R+PVVD GKLVG+++ G+
Sbjct: 76 ELTNPP----VKNVMGKPPITVTPEHNLKDVAKIFLENYIHRVPVVDN-GKLVGIVSLGD 130
Query: 219 VVRA 222
+++A
Sbjct: 131 LLKA 134
>gi|75675224|ref|YP_317645.1| hypothetical protein Nwi_1031 [Nitrobacter winogradskyi Nb-255]
gi|74420094|gb|ABA04293.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
Length = 143
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 21/149 (14%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV +MT+ D+ V T+D+ + +PV+DD + +G+V+ +D L +I
Sbjct: 8 TVDRYMTR--DVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFLKCFAI 65
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ ++S ++EL R + V D+M + V T L +L+
Sbjct: 66 T------------LSSVVPHYDELMR-------RAVSDVMIHEFIYVGPTTKLARVLQLM 106
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+E + R +PV+ G LVG+I+R +V+RA
Sbjct: 107 VEHRLRSIPVMGGGRNLVGIISREDVMRA 135
>gi|239906907|ref|YP_002953648.1| hypothetical protein DMR_22710 [Desulfovibrio magneticus RS-1]
gi|239796773|dbj|BAH75762.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 218
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VGD+M+ D+ ++ +A + +K+I PV+D D KLVG++S+ DL A
Sbjct: 3 VGDWMST--DVATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIISERDLKAAS--- 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ ++ + E+ LLS+ K + MT P+ + +E AA ++
Sbjct: 58 ----------PSTATSLDMY-EMTYLLSELKVKAI---MTKDPVRIRRTDTVERAALIMR 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K+ LPVVD K+VG+IT ++ R + I
Sbjct: 104 DRKFGSLPVVDETNKVVGIITDTDIFRLFVSI 135
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+VGD M+ E+ ++ A R++ + K RRLPVVD GKLVG+I+ ++ A+
Sbjct: 2 LVGDWMSTDVATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIISERDLKAAS 57
>gi|410463871|ref|ZP_11317355.1| putative signal-transduction protein (cAMP-binding and CBS domain
containing protein) [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982989|gb|EKO39394.1| putative signal-transduction protein (cAMP-binding and CBS domain
containing protein) [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 220
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+M+K K TT++ +A + + E PV+DDD +LVG+++D D+
Sbjct: 3 IKDWMSKTP--VTAKATTSIMKAAKLMKENGFGRLPVVDDDGRLVGIITDRDV------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ VGD+MT + V + +E AA L+L
Sbjct: 54 ------KEASPS-KATTLDMHELYYLLSEIK---VGDIMTKTVITVGPDDTVEKAAVLML 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+PVVD G +VG+IT ++ + + I
Sbjct: 104 RHNVGGMPVVDDKGLVVGVITDSDIFKVLVSI 135
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D M+ P+ T++ AA+L+ E + RLPVVD G+LVG+IT +V A+
Sbjct: 2 LIKDWMSKTPVTAKATTSIMKAAKLMKENGFGRLPVVDDDGRLVGIITDRDVKEAS 57
>gi|390444607|ref|ZP_10232382.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
gi|389664305|gb|EIM75806.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
Length = 153
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 28/170 (16%)
Query: 52 VKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPV 111
VK+F GV + + TVG M+ K L + V + +E +K+I+G PV
Sbjct: 2 VKSF--QGVRVVET-KKNEAALTVGACMSTK--LITFRPEDPVLKVVEVFAQKKISGAPV 56
Query: 112 IDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGD 171
+DD KL+G++S+ D L + G ++T +P+ V +
Sbjct: 57 VDDAGKLIGMISEGD--CLQEVIRGKYSNTPQYPS---------------------TVEN 93
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
MT + ++ +L +AA+ K RR PV+ G+LVG I+ +V+R
Sbjct: 94 YMTREVRTLQQDMSLFEAAQAFRVEKVRRFPVLSASGQLVGQISISDVIR 143
>gi|338974904|ref|ZP_08630260.1| tnosine-5'-monophosphate dehydrogenase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231999|gb|EGP07133.1| tnosine-5'-monophosphate dehydrogenase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 254
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 67 PPRNGTYTVGDFMTKKEDL--HAVKTT--TTVDEALERLVEKRITGFPVIDDDWKLVGVV 122
P R + GDFM + +K T ++ A + +++ ++G PV+D +L+G+V
Sbjct: 3 PHRPHPNSKGDFMRAHHIMTRKVIKVTPDDSIAHAAKLMLDNHVSGLPVVDLKGELIGIV 62
Query: 123 SDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE 182
++ DLL I + L + + +Q T G+ V ++MT V E
Sbjct: 63 TERDLLRRREIGTQRKRPRWLDFILGPGRQAAEYVQ-----TAGRRVDEIMTRDVQTVTE 117
Query: 183 NTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+T L D ++ + +R+PVV+G KL G+++R N VRA + RD
Sbjct: 118 DTPLADVVAIMEKYHIKRVPVVNGK-KLTGIVSRQNFVRAVAGLTRD 163
>gi|322387419|ref|ZP_08061029.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|417936147|ref|ZP_12579464.1| CBS domain protein [Streptococcus infantis X]
gi|419842595|ref|ZP_14365932.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|321141948|gb|EFX37443.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|343403056|gb|EGV15561.1| CBS domain protein [Streptococcus infantis X]
gi|385703540|gb|EIG40653.1| CBS domain protein [Streptococcus infantis ATCC 700779]
Length = 218
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D KLVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD G+L G+IT +V A L+I GE
Sbjct: 103 KNKIGILPVVDN-GQLYGVITDRDVFSAFLEIAGYGEE 139
>gi|253699582|ref|YP_003020771.1| hypothetical protein GM21_0947 [Geobacter sp. M21]
gi|251774432|gb|ACT17013.1| CBS domain containing protein [Geobacter sp. M21]
Length = 216
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 23/146 (15%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
+V EAL + +K+I PV++ + KLVG+VSD DL TSL + W+
Sbjct: 19 SVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLF-----QASPSPATSL-----AIWE 68
Query: 153 TFNELQRL-LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ L +L + KT K D++T V E+T LE+AAR++++ + LPV+ G LV
Sbjct: 69 IHDLLAKLTVDKTMAK---DVIT-----VTEDTPLEEAARVMVDRRIGGLPVMKGDA-LV 119
Query: 212 GLITRGNVVRAALQI---KRDGERST 234
G+IT ++ +A L++ +R G R T
Sbjct: 120 GIITESDLFQALLELLGGRRQGVRLT 145
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+V D MTP P+ + + ++ +A RL+ + K RRLPVV+ GKLVG+++ ++ +A+
Sbjct: 2 LVRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQAS 57
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 80 TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQ 138
T +D+ V T ++EA +V++RI G PV+ D LVG++++ DL AL + GG +
Sbjct: 81 TMAKDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD-ALVGIITESDLFQALLELLGGRR 139
Query: 139 NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
L T ++ + + + G +VG
Sbjct: 140 QGVRLTVTTTGAKGTLADVAQTIYEAGGDIVG 171
>gi|170695632|ref|ZP_02886775.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170139431|gb|EDT07616.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 229
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 77 DFMTKKEDLHAVKTTT---TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
D MT H V + T T+ + + V+ I+G PV+D D +VG++S+ DLL I
Sbjct: 5 DVMT-----HTVVSATPDMTIRQVAKMFVDNGISGAPVLDTDGSIVGIISEGDLLRRSEI 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
S W +E R KT+ V D+MT + V +T L + A +L
Sbjct: 60 GTDETRRASWL----DFWSARHE-ARDYVKTHAAKVSDVMTTDVVTVQPDTPLGEVAGIL 114
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV + G++VG+++R N+V+A
Sbjct: 115 EARHVKRVPVTE-RGQVVGIVSRANLVQA 142
>gi|156741506|ref|YP_001431635.1| signal transduction protein [Roseiflexus castenholzii DSM 13941]
gi|156232834|gb|ABU57617.1| putative signal transduction protein with CBS domains [Roseiflexus
castenholzii DSM 13941]
Length = 212
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 19/139 (13%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V TTV +AL EKRI PVID +LVG+V++ DLL TSL
Sbjct: 14 VAPKTTVSDALMLFREKRIRRAPVIDHH-RLVGIVAERDLL-----FASPSPITSL---- 63
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
S W EL LLSK V ++MT + V E+T +E+AAR++ + + LPV+ G+
Sbjct: 64 -SVW----ELNYLLSKLT---VDEVMTHEVITVAEDTPIEEAARIMADKRVGGLPVMRGH 115
Query: 208 GKLVGLITRGNVVRAALQI 226
+VG+IT ++ + L++
Sbjct: 116 -DVVGIITETDLFKILLEL 133
>gi|209517837|ref|ZP_03266671.1| CBS domain containing membrane protein [Burkholderia sp. H160]
gi|209501670|gb|EEA01692.1| CBS domain containing membrane protein [Burkholderia sp. H160]
Length = 230
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ +A + V+ I G PV+D + +++G+VS DLL G ++S+ +
Sbjct: 19 TIHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLLHRVETGTGRGKRRWWLELLSSSAR 78
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
E K +G +VGD+M + + E+ L A L+ +R+PV+ G+LVG
Sbjct: 79 ---EQAARYVKEHGHIVGDVMCDNVISIPEDMPLNQIADLMGRRHLKRVPVLKD-GRLVG 134
Query: 213 LITRGNVVRA 222
+++R N++RA
Sbjct: 135 IVSRSNLIRA 144
>gi|206901430|ref|YP_002250654.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
gi|206740533|gb|ACI19591.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
Length = 214
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 18/122 (14%)
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
++ D KLVG+V++ DL S+S S+F E+ LL K V
Sbjct: 36 LVRDKGKLVGIVTERDL---RSVSPSQATSLSIF-----------EINYLLEKLK---VK 78
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
D MTP P+ V + +E+AA ++ + K LPV++ G++VG+IT ++ RA +++ DG
Sbjct: 79 DAMTPNPITVDADAPIEEAALIMRDNKISALPVIEN-GEVVGIITESDIFRAFIEMLGDG 137
Query: 231 ER 232
++
Sbjct: 138 KK 139
>gi|448579115|ref|ZP_21644392.1| metalloprotease [Haloferax larsenii JCM 13917]
gi|445723794|gb|ELZ75430.1| metalloprotease [Haloferax larsenii JCM 13917]
Length = 390
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT EDL V+ T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGSEDLDVVEEQTSVAELLERMFVERHTGYPVLRNG-DLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + V D+M+ + + + DA L+
Sbjct: 301 ------------------RSVKEVER-----DAYRVDDIMSDELATIGPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G LVGL++R ++V A I+ G
Sbjct: 338 QERGVGRLPVVDEQGDLVGLVSRSDLVTAFNIIRSRG 374
>gi|333984454|ref|YP_004513664.1| signal transduction protein with CBS domains [Methylomonas
methanica MC09]
gi|333808495|gb|AEG01165.1| putative signal transduction protein with CBS domains [Methylomonas
methanica MC09]
Length = 131
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 32/151 (21%)
Query: 74 TVGDFMTKKEDLHAVKTT--TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
V D+M++ H V + T V A +++++ +IT PV+D KLVG+ S+ D + +
Sbjct: 6 AVADYMSR----HPVTVSPDTEVSAAFKKMLDHKITSVPVVDGHGKLVGIFSEKDGMKIV 61
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
S NQ+ T GK V + MT AP+VV +L D A
Sbjct: 62 LESAYNQSMT------------------------GK-VSEFMTAAPMVVDVEESLVDVAA 96
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ R PV G +VG+I+R +V+RA
Sbjct: 97 KFQNSPIRSFPVFQ-EGAMVGMISRVDVLRA 126
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
V D M+ P+ V +T + A + +L+ K +PVVDG+GKLVG+ + + ++ L+
Sbjct: 7 VADYMSRHPVTVSPDTEVSAAFKKMLDHKITSVPVVDGHGKLVGIFSEKDGMKIVLE 63
>gi|389845760|ref|YP_006347999.1| metalloprotease [Haloferax mediterranei ATCC 33500]
gi|388243066|gb|AFK18012.1| metalloprotease [Haloferax mediterranei ATCC 33500]
Length = 390
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E L V TT+V E LER+ +R TG+PV+ + LVG+V+ D
Sbjct: 248 VVRDIMTPRESLDVVDETTSVAELLERMFVERHTGYPVLRNG-DLVGMVTLDDA------ 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + V D+M+ + + + DA L+
Sbjct: 301 ------------------RSVKEVER-----DAFRVDDIMSNELTTIDPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G LVGLI+R ++V A I+ G
Sbjct: 338 QERSVGRLPVVDETGDLVGLISRSDLVTAFNIIRSRG 374
>gi|384440224|ref|YP_005654948.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359291357|gb|AEV16874.1| hypothetical protein TCCBUS3UF1_18350 [Thermus sp. CCB_US3_UF1]
Length = 150
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL-DSI 133
V + MTK D + T++EA R++EKR PV+D + L+G++ +LL +++
Sbjct: 3 VQELMTKDPD--TIGPEATLEEAARRILEKRYGSLPVVDREGYLLGLLQVEELLPRPENV 60
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ LF W N LQ + + V +M VH + A +L
Sbjct: 61 PFSDVEALQLF----GEWVDGNFLQDIYRRYQKTPVKAVMRTDIPRVHPEDPVGKALEVL 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
L + R LPVVDG ++VG++TR + ++ L+
Sbjct: 117 LTREIRHLPVVDGSNRVVGILTRSDFLKLILR 148
>gi|421277076|ref|ZP_15727896.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
gi|395876357|gb|EJG87433.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 83/157 (52%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D KLVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ K LPVVD G+L G+IT +V A L+I GE
Sbjct: 103 KNKIGILPVVDN-GQLYGVITDRDVFSAFLEIAGYGE 138
>gi|218440518|ref|YP_002378847.1| chloride channel core [Cyanothece sp. PCC 7424]
gi|218173246|gb|ACK71979.1| Chloride channel core [Cyanothece sp. PCC 7424]
Length = 875
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 46/175 (26%)
Query: 58 NGVGITNSVPPRNGTYTVGDFMTK-------KEDLHAVKTTTTVDEALERLVEKRITGFP 110
+G+ +T +P V DF++K + + + + +++ L+ + R GFP
Sbjct: 432 SGIHLTEEIP-------VNDFLSKLKASDVMQSQVETLDSYLSLEAVLQAMSISRHRGFP 484
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
V+++ KLVG+V+ DL N D S EL +
Sbjct: 485 VVEEG-KLVGIVTQSDL--------SNLGDRS------------EEL----------TLR 513
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+MTP P+ V T+L D LL + RLPV +G+ KLVG+ITR ++++A ++
Sbjct: 514 QIMTPKPITVQPETSLSDVLYLLNRYQLSRLPVTEGH-KLVGIITRTDIIQAEVK 567
>gi|420237534|ref|ZP_14741999.1| hypothetical protein A200_07053 [Parascardovia denticolens IPLA
20019]
gi|391879156|gb|EIT87668.1| hypothetical protein A200_07053 [Parascardovia denticolens IPLA
20019]
Length = 616
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
K +++ + T T +A+ EK+I+G PV+D+ +LVG VSD D+ L +++ + T
Sbjct: 476 KTEVYTLPATATALDAMRLFTEKKISGAPVVDEQGELVGFVSDGDV--LSTLAEQHPQFT 533
Query: 142 SLFPNV-NSTWKTFN-ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
S + V S ++F+ +L LLS V + T + N ++ +++++ +
Sbjct: 534 SFYAAVIESNGESFDKKLDELLSLP----VDRISTKHVITADVNDSMPHICQVMVQRHLK 589
Query: 200 RLPVVDGYGKLVGLITRGNVVRAAL 224
++PV+D G++VG++ R N++R A+
Sbjct: 590 KVPVMD-QGRMVGILNRSNILRYAV 613
>gi|417938413|ref|ZP_12581711.1| CBS domain protein [Streptococcus infantis SK970]
gi|343391503|gb|EGV04078.1| CBS domain protein [Streptococcus infantis SK970]
Length = 218
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D KLVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD G+L G+IT +V A L+I GE
Sbjct: 103 KNKIGILPVVDN-GQLYGVITDRDVFSAFLEIAGYGEE 139
>gi|297197552|ref|ZP_06914949.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
gi|197715576|gb|EDY59610.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
AV T E + + + +++ PV++ + ++VG+VS+ DLL +
Sbjct: 7 AVGRKATFKEIVRLMQDWKVSALPVLEGEGRVVGLVSEADLLPKEEFR------------ 54
Query: 147 VNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
+S + +L+RL L+K +LMT L + L AAR + ++ +RLPVV
Sbjct: 55 -DSDPDRYTQLRRLSDLAKAGAVTAEELMTSPALTTRPDATLAQAARTMAHSRVKRLPVV 113
Query: 205 DGYGKLVGLITRGNVVRAALQ 225
+ G L G+++R ++++ L+
Sbjct: 114 NELGMLEGIVSRADLLKVFLR 134
>gi|448484929|ref|ZP_21606330.1| CBS domain containing membrane protein [Halorubrum arcis JCM 13916]
gi|445819362|gb|EMA69206.1| CBS domain containing membrane protein [Halorubrum arcis JCM 13916]
Length = 166
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T T D M + D+ V V + +R +GFPV+DDD ++VGV+++ DL+ L
Sbjct: 2 TLTARDLM--EPDVKTVSPDDDVADVFKRFARYEFSGFPVVDDDERVVGVITESDLVDL- 58
Query: 132 SISGGNQNDTSLFP------------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV 179
+++T P V W + L L + + V ++M+
Sbjct: 59 ---FEPEDETLWIPIGLPPFVDTLSYQVKRPWADID-LGVDLIRNADRPVAEVMSTDVAT 114
Query: 180 VHENTNLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
V + +++D LL+ + R+PVVD G LVG+I R +V+RA
Sbjct: 115 VTPDASVDDVLDLLVGDDPDINRVPVVDEDGHLVGIIARQDVIRA 159
>gi|424886817|ref|ZP_18310425.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393176168|gb|EJC76210.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN---QNDTSLFPNVNS 149
+V A + + ++ ++G PV+D D ++GV+S+ DL+ +S G + D L P
Sbjct: 19 SVRHAAKLMSDQHVSGVPVVDHDGCVLGVISEGDLIRRTELSNGAFVLKADMGLGP---- 74
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209
++ K VGD+MTP P+V+ E L A L+ + +R+PV+ GK
Sbjct: 75 -----DDRANAFIKRCAWRVGDVMTPDPVVIDEEAPLFRVAVLMQDRGIKRIPVLRD-GK 128
Query: 210 LVGLITRGNVVR 221
LVG+++R ++++
Sbjct: 129 LVGIVSRADLLQ 140
>gi|452949577|gb|EME55044.1| CBS domain containing membrane protein [Amycolatopsis decaplanina
DSM 44594]
Length = 231
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 105 RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKT 164
R++G PV+DD+ ++VGVVS DLL + + L K
Sbjct: 35 RLSGAPVVDDEGRVVGVVSQRDLLEREIRHRLLRFRPRLR-----------------RKV 77
Query: 165 NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
G+ +LMT + V ++ +++A RL+ + + RLPV+D KLVG++ R +++R L
Sbjct: 78 EGRRADELMTTPAITVAQDAGVDEAIRLMEDHRVHRLPVLDDDAKLVGIVGRSDLLRGFL 137
Query: 225 Q 225
+
Sbjct: 138 R 138
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
VDEA+ + + R+ PV+DDD KLVG+V DLL G ++D+ L V +
Sbjct: 99 VDEAIRLMEDHRVHRLPVLDDDAKLVGIVGRSDLL-----RGFLRSDSGLCAEVRT 149
>gi|220905178|ref|YP_002480490.1| hypothetical protein Ddes_1916 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869477|gb|ACL49812.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 219
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V ++MT D+ +V T++ + + + + + PV+DD ++VG++SD D+
Sbjct: 3 VQNWMTT--DVVSVTPETSLLKVGKLMKDHHVRRLPVLDDKGRVVGIISDRDV------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
D S P+ +T + E+ LL++ K ++MT P+ V + +E AA ++L
Sbjct: 54 ----RDAS--PSKATTLDMY-EMHYLLAELKAK---NIMTANPMTVKPSDTVEQAALIML 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVV+ GKLVG+I+ +V +A + I
Sbjct: 104 DNKIGGLPVVEDSGKLVGIISDHDVFKALVDI 135
>gi|448616620|ref|ZP_21665330.1| metalloprotease [Haloferax mediterranei ATCC 33500]
gi|445751275|gb|EMA02712.1| metalloprotease [Haloferax mediterranei ATCC 33500]
Length = 395
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E L V TT+V E LER+ +R TG+PV+ + LVG+V+ D
Sbjct: 253 VVRDIMTPRESLDVVDETTSVAELLERMFVERHTGYPVLRNG-DLVGMVTLDDA------ 305
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ E++R + V D+M+ + + + DA L+
Sbjct: 306 ------------------RSVKEVER-----DAFRVDDIMSNELTTIDPDADAMDAIALM 342
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G LVGLI+R ++V A I+ G
Sbjct: 343 QERSVGRLPVVDETGDLVGLISRSDLVTAFNIIRSRG 379
>gi|170741730|ref|YP_001770385.1| hypothetical protein M446_3570 [Methylobacterium sp. 4-46]
gi|168196004|gb|ACA17951.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
Length = 246
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 17/137 (12%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTF----NE 156
++EKRI+G P++D +LVG+V++ DL+A I + W +
Sbjct: 27 MLEKRISGLPILDAAGRLVGIVTEGDLVARREIGTARP---------HPAWIRYLLSPGR 77
Query: 157 LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
L ++ G VGD MT + T L+D L+ + RR+P+V+ G+LVG++TR
Sbjct: 78 LAAAYARECGHRVGDAMTREVVTASPETPLDDIVGLMARRRIRRVPIVED-GRLVGIVTR 136
Query: 217 GNVVRA---ALQIKRDG 230
+++RA AL+ R+
Sbjct: 137 ADLLRALHDALRAAREA 153
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 183 NTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+ +LE AA L+LE + LP++D G+LVG++T G++V
Sbjct: 17 DLSLELAAALMLEKRISGLPILDAAGRLVGIVTEGDLV 54
>gi|414173939|ref|ZP_11428566.1| hypothetical protein HMPREF9695_02212 [Afipia broomeae ATCC 49717]
gi|410890573|gb|EKS38372.1| hypothetical protein HMPREF9695_02212 [Afipia broomeae ATCC 49717]
Length = 241
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGN 137
MT+K + V ++ +A +++ ++G PV+D LVG+V++ DLL I G
Sbjct: 6 IMTRK--VIKVAPGDSITDAARLMLDNHLSGLPVVDLKGALVGIVTERDLLRRREI-GTQ 62
Query: 138 QNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETK 197
+N + + + +T G+ V ++MT V E+T L D ++ +
Sbjct: 63 RNRPRWLDFILGPGRQAADY----VQTAGRRVDEIMTRDVQTVTEDTPLSDVVAIMERYR 118
Query: 198 YRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+R+PV++ KL G+I+R N VRA + RD
Sbjct: 119 IKRVPVMNSNNKLTGIISRQNFVRAVAGLARD 150
>gi|158521214|ref|YP_001529084.1| CBS domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510040|gb|ABW67007.1| CBS domain containing membrane protein [Desulfococcus oleovorans
Hxd3]
Length = 152
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 17/151 (11%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MTK ++ V T + +A L+E I G PV++ D +LVG++ DL+
Sbjct: 6 DIMTK--EVITVSPETDIAQATRLLLENHINGAPVVNADGELVGMLCQSDLIV------- 56
Query: 137 NQNDTSLFPNVNS------TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
Q P++ + ++ + L++ + K V D M+ P+ V + +ED A
Sbjct: 57 -QQKKIPLPSIFTFLDGVFSFSSTKSLEKEMQKIAATTVADAMSTDPVSVTPDATVEDVA 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L+ E + +PVV+ K+VG++ + +V++
Sbjct: 116 SLMAEKHFHTIPVVEN-SKVVGVLGKEDVLK 145
>gi|219852650|ref|YP_002467082.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
E1-9c]
gi|219546909|gb|ACL17359.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
E1-9c]
Length = 490
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 32/140 (22%)
Query: 82 KEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQND 140
+ D+ +V +TV + +ERL+ I G PV+DDD +++G+VS D+ A+
Sbjct: 98 ERDVQSVTPESTVAD-VERLMNIHGIGGVPVLDDDQRIIGIVSRRDVRAI---------- 146
Query: 141 TSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
+SK + + +MT P+ EN N++DA ++ K R
Sbjct: 147 --------------------VSKRGAESIRTIMTKQPITTGENINIDDALEVMYTNKVER 186
Query: 201 LPVVDGYGKLVGLITRGNVV 220
LPVV+ +L+G+IT +++
Sbjct: 187 LPVVNSEKRLLGIITMQDIL 206
>gi|320527726|ref|ZP_08028896.1| CBS domain pair protein [Solobacterium moorei F0204]
gi|320131891|gb|EFW24451.1| CBS domain pair protein [Solobacterium moorei F0204]
Length = 225
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 28/163 (17%)
Query: 79 MTKKEDLHAVKTTTTVD----EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
M K+ + A T T D +ALE + + PV+D + KL+G++++
Sbjct: 1 MYVKDHMTANPITITADTPLSKALEIMGKNHFHRLPVVDANHKLIGLITE---------- 50
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGK--VVGDLMTPAPLVVHENTNLEDAARL 192
G ND S N+T + EL LLS+T K ++ D+ T +P+V LE+AA++
Sbjct: 51 -GLVNDAS---GKNATSLSIYELNYLLSRTQAKDIMIRDVHTISPMVF-----LEEAAQV 101
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRA---ALQIKRDGER 232
+LE LPVVD +VG+IT ++ + +KR G R
Sbjct: 102 MLENAVNVLPVVDEENHVVGIITEKDIFLTFVDLMGLKRQGTR 144
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 30 PITVATPSHLSKRL---------RFFTVSREVKAFAHNGVGITNSVPPRNGT----YTVG 76
PIT+ + LSK L R V K G+ N +N T Y +
Sbjct: 11 PITITADTPLSKALEIMGKNHFHRLPVVDANHKLIGLITEGLVNDASGKNATSLSIYELN 70
Query: 77 DFMTKKE-------DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-L 128
+++ + D+H + ++EA + ++E + PV+D++ +VG++++ D+ L
Sbjct: 71 YLLSRTQAKDIMIRDVHTISPMVFLEEAAQVMLENAVNVLPVVDEENHVVGIITEKDIFL 130
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV 168
+ G + T ++ F ++ +L ++ N V
Sbjct: 131 TFVDLMGLKRQGTRFVMLIDDKPGVFAQVTKLFAQENANV 170
>gi|39996900|ref|NP_952851.1| hypothetical protein GSU1801 [Geobacter sulfurreducens PCA]
gi|409912322|ref|YP_006890787.1| hypothetical protein KN400_1824 [Geobacter sulfurreducens KN400]
gi|39983788|gb|AAR35178.1| CBS domain pair-containing protein [Geobacter sulfurreducens PCA]
gi|298505913|gb|ADI84636.1| CBS domain pair-containing protein [Geobacter sulfurreducens KN400]
Length = 149
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT ++ + TT+ E E + RI PV+D+ L G+V++ DL+
Sbjct: 3 TVRDIMTT--NVVTARRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLI----- 55
Query: 134 SGGNQNDTSL-FPNVNST--WKTFNE----LQRLLSKTNGKVVGDLMTPAPLVVHENTNL 186
+ D SL P V S W + E +R + K G+ GD+ T V T +
Sbjct: 56 ----EQDKSLHIPTVISLFDWVIYLESAKKFEREIQKVTGQTAGDIYTTEVESVTPETPV 111
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
A ++ K LPVV+G KLVG+++R +++R
Sbjct: 112 STVADIMANKKLHTLPVVEG-KKLVGIVSRIDLIR 145
>gi|344940460|ref|ZP_08779748.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
gi|344261652|gb|EGW21923.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
Length = 386
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
G D M + D+ V+ T V+EA + + ++++ PVID +++G+++ D
Sbjct: 231 KGNIICADIMVR--DVPVVEYGTEVEEAWKIMHKQKLKAMPVIDRARRVIGIITWNDFFK 288
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
++S + + ++ F +S + VG +MT + V+ E+ ++ D
Sbjct: 289 FINLSA--------YESFQDRFRAFIRRTPDVSTDKPESVGHMMTTSVTVLPESAHIADL 340
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L+ YR++P+V+ +LVG++ + N++ A
Sbjct: 341 ISLMSTQGYRQIPIVNSENRLVGMVYQANLIAA 373
>gi|399035557|ref|ZP_10732972.1| CBS domain-containing protein [Rhizobium sp. CF122]
gi|398066688|gb|EJL58247.1| CBS domain-containing protein [Rhizobium sp. CF122]
Length = 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 78/146 (53%), Gaps = 25/146 (17%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG----GNQN 139
D+ + ++V +A++ +V K I+G PVID+D L G++++ DL+ G GN +
Sbjct: 10 DITTISADSSVHQAIDLMVAKNISGLPVIDNDGNLCGLLTEGDLMRRIEFGGGRSAGNPD 69
Query: 140 DTSL--FPNV--NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
+TSL F + + +W+ F D+M+ + + V T A ++ +
Sbjct: 70 NTSLVDFDDYIRSRSWRVF----------------DVMSASVISVTPETPAAAVAEVMFQ 113
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVR 221
K +R+PVV G +L+G+++R ++++
Sbjct: 114 HKIKRVPVVSGK-RLLGIVSRIDLLK 138
>gi|376296861|ref|YP_005168091.1| hypothetical protein DND132_2083 [Desulfovibrio desulfuricans
ND132]
gi|323459423|gb|EGB15288.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 224
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 81/152 (53%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V ++MTK D+ + ++ +A + + +K I+ PV+D+ +++G+VSD D+
Sbjct: 3 VANWMTK--DVITITPERSMMKASKLMKDKAISRLPVVDESGRIIGIVSDRDI------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
D S P+ +T +EL LLS+ + D+MT + + + +E AA L+L
Sbjct: 54 ----KDAS--PSKATTLDV-HELYYLLSEIK---IADIMTKKVVTIRDTETVEKAAVLML 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
E + LPVVD +VG+IT ++ + ++I
Sbjct: 104 EGNFGGLPVVDENDHVVGIITDTDIFKVLVEI 135
>gi|212716979|ref|ZP_03325107.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660264|gb|EEB20839.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 692
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ ++ ST
Sbjct: 555 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIA--TYESRTVPTGTGSTMVV 610
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 611 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 669
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 670 VGVIRRKSVMEHAF 683
>gi|344212132|ref|YP_004796452.1| CBS domain-containing IMP dehydrogenase/putative signal
transduction protein [Haloarcula hispanica ATCC 33960]
gi|343783487|gb|AEM57464.1| CBS domain-containing IMP dehydrogenase / putative signal
transduction protein [Haloarcula hispanica ATCC 33960]
Length = 272
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 39/156 (25%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TVGD+MT++ + V+ TV E R+ + +GFPV D ++ G VS DLL
Sbjct: 17 TVGDYMTRE--VATVELDDTVGEVARRIADNDHFSGFPVTDG-RRVEGFVSARDLL---- 69
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
L + ++ +MT LV H + ++DAAR+
Sbjct: 70 ----------LAEDHEPMFR-------------------VMTDDILVAHPDMAVQDAARV 100
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 101 ILRSGIQKLPVVDDAGHLVGIISNADVIRS--QIER 134
>gi|299535418|ref|ZP_07048740.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|424737584|ref|ZP_18166035.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
gi|298729179|gb|EFI69732.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
gi|422948439|gb|EKU42818.1| acetoin utilization protein [Lysinibacillus fusiformis ZB2]
Length = 215
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 86 HAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFP 145
+ + T TV EAL+ + EK++ PV+DD+ ++GV+++ D+ + S ++ ++ +F
Sbjct: 12 YTLAPTNTVQEALKLMREKKVRHLPVVDDEQHVLGVITERDIKEVLPSSLQDEPNSPIF- 70
Query: 146 NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
N K V D+M PL+ H +E+ A E+K LP+V
Sbjct: 71 -------------------NAK-VEDIMVKDPLIGHPLDFVEEVALTFYESKIGCLPIVS 110
Query: 206 GYGKLVGLITRGNVVRAALQI 226
G GKLVG++T +++ +++
Sbjct: 111 G-GKLVGIVTTTDLLYTYIEL 130
>gi|392542741|ref|ZP_10289878.1| hypothetical protein PpisJ2_13063 [Pseudoalteromonas piscicida JCM
20779]
gi|409201902|ref|ZP_11230105.1| hypothetical protein PflaJ_11189 [Pseudoalteromonas flavipulchra
JG1]
Length = 142
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 25/134 (18%)
Query: 89 KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148
K V+ A+E+L++ +G PVID+ +++G +S+ D L + QN++
Sbjct: 18 KQDMRVESAVEKLLQSGQSGGPVIDEARRVIGFLSEQDCLK-KMLEATYQNESH------ 70
Query: 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG 208
VV D+MT PL V ++ A L++ K + PVVD G
Sbjct: 71 ------------------SVVSDVMTKEPLCVKREDSIVQMADLMICNKPKVYPVVDDEG 112
Query: 209 KLVGLITRGNVVRA 222
+L+G+I+R NV+ A
Sbjct: 113 RLLGVISRANVLLA 126
>gi|403234640|ref|ZP_10913226.1| hypothetical protein B1040_02530 [Bacillus sp. 10403023]
Length = 150
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
K+D+ VK + TV +++ + I+G P+ID+ ++G +SD D++ +T
Sbjct: 8 KQDVITVKDSDTVKTVIQKFITHGISGLPIIDNHHHIIGYISDGDIMRYIGKHREIMINT 67
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAP---LVVHENTNLEDAARLLLETKY 198
+ V + E + L + N +MT A L + N ++E+ A +L +
Sbjct: 68 FNYIAVVKDQDDYEERTQKLLELN------VMTVAKTSVLKISYNEDVENIAAILGKKHI 121
Query: 199 RRLPVVDGYGKLVGLITRGNVVRAALQ 225
++LP V+ GKLVG+I+RG+V+R + +
Sbjct: 122 KKLP-VERDGKLVGIISRGDVIRESFK 147
>gi|160334181|gb|ABX24505.1| putative transport protein [Streptomyces cacaoi subsp. asoensis]
gi|399912905|gb|AFP55324.1| putative transport protein [Streptomyces aureochromogenes]
Length = 267
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 14/153 (9%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV D MT + V T E + L E IT PV++D+ +++GVVS+ DLL ++
Sbjct: 39 TVSDLMTTS--VVKVHRDTGFKEIAKLLAEHDITAVPVVNDEERVMGVVSEADLLRKEA- 95
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLM-TPAPLVVHENTNLEDAARL 192
+ L P ++ +K LM +PA + T +E AA++
Sbjct: 96 --AQLDPAGLLPVLHPGPADR-------AKAEATTAAGLMHSPAVTAGPQWTAVE-AAQV 145
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + +RLPVVD G+LVGLI+R +++R L+
Sbjct: 146 MERHRVKRLPVVDEAGRLVGLISRADLLRVFLR 178
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
WK R + V DLMT + + VH +T ++ A+LL E +PVV+ ++
Sbjct: 22 WKQERTRPREAGAMRHRTVSDLMTTSVVKVHRDTGFKEIAKLLAEHDITAVPVVNDEERV 81
Query: 211 VGLITRGNVVR 221
+G+++ +++R
Sbjct: 82 MGVVSEADLLR 92
>gi|307104771|gb|EFN53023.1| hypothetical protein CHLNCDRAFT_59753 [Chlorella variabilis]
Length = 209
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN 165
I G PV+D D KLVGVVS DL
Sbjct: 109 IEGMPVVDGDNKLVGVVSRKDL-----------------------------------AKG 133
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
G +V D+M+ P+ + + + DAA ++++ K+ R+PVVD VG++TR ++ A Q
Sbjct: 134 GALVQDIMSSTPVSLKASGKVADAAEIMIKHKFHRVPVVDDDNTCVGIVTRSDIFWALTQ 193
Query: 226 IKRDGE 231
++G+
Sbjct: 194 TDQEGD 199
>gi|223478496|ref|YP_002583173.1| inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
gi|214033722|gb|EEB74548.1| Inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
Length = 485
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 35/139 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ ++ T+D AL + + I G PV++D K+VGV+S + D +
Sbjct: 101 EDVISISPDETIDYALFLMEKNDIDGLPVVED-GKVVGVIS--------------KKDIA 145
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
+ P GK+V ++MT P+ V E+ E+A L+ E + RLP
Sbjct: 146 VKP--------------------GKLVREVMTGEPITVPESVTAEEALNLMFEHRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVVR 221
VV+ GKLVG+IT ++ +
Sbjct: 186 VVNSEGKLVGIITMSDLAK 204
>gi|225352807|ref|ZP_03743830.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156414|gb|EEG69983.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 692
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L +I+ ++ ST
Sbjct: 555 ITHVVHEFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KAIA--TYESRTVPTGTGSTMVV 610
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 611 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 669
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 670 VGVIRRKSVMEHAF 683
>gi|448681766|ref|ZP_21691857.1| CBS domain-containing IMP dehydrogenase/putative signal
transduction protein [Haloarcula argentinensis DSM
12282]
gi|445767636|gb|EMA18739.1| CBS domain-containing IMP dehydrogenase/putative signal
transduction protein [Haloarcula argentinensis DSM
12282]
Length = 263
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 39/156 (25%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TVGD+MT++ + V+ TV E R+ + +GFPV D ++ G VS DLL
Sbjct: 8 TVGDYMTRE--VATVELDDTVGEVARRIADNDHFSGFPVTDG-RRVEGFVSARDLL---- 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
L + ++ +MT LV H + ++DAAR+
Sbjct: 61 ----------LAEDHEPMFR-------------------VMTDDILVAHPDMAVQDAARV 91
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 92 ILRSGIQKLPVVDDAGHLVGIISNADVIRS--QIER 125
>gi|448671913|ref|ZP_21687667.1| CBS domain-containing IMP dehydrogenase/putative signal
transduction protein [Haloarcula amylolytica JCM 13557]
gi|445764542|gb|EMA15694.1| CBS domain-containing IMP dehydrogenase/putative signal
transduction protein [Haloarcula amylolytica JCM 13557]
Length = 263
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 39/156 (25%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TVGD+MT++ + V+ TV E R+ + +GFPV D ++ G VS DLL
Sbjct: 8 TVGDYMTRE--VATVELDDTVGEVARRIADNDHFSGFPVTDG-RRVEGFVSARDLL---- 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
L + ++ +MT LV H + ++DAAR+
Sbjct: 61 ----------LAEDHEPMFR-------------------VMTDDILVAHPDMAVQDAARV 91
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 92 ILRSGIQKLPVVDDAGHLVGIISNADVIRS--QIER 125
>gi|433645952|ref|YP_007290954.1| inosine-5''-monophosphate dehydrogenase [Mycobacterium smegmatis
JS623]
gi|433295729|gb|AGB21549.1| inosine-5''-monophosphate dehydrogenase [Mycobacterium smegmatis
JS623]
Length = 513
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 89/218 (40%), Gaps = 64/218 (29%)
Query: 29 LPITVATPSHLSKRLRF-----------FTVSREVKAFAH-NGVGITNSVPP-------- 68
+P T T S L++++R T SR A A G+G+ + P
Sbjct: 44 VPATADTSSQLTRKIRLRVPLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQV 103
Query: 69 ----RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124
R+ V D +T D T VD R RI+G PV+D D LVG++++
Sbjct: 104 ETVKRSEAGMVTDPVTCSPD----NTLAEVDAMCARF---RISGLPVVDADGALVGIITN 156
Query: 125 YDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHEN 183
D+ + +SK V ++MT APL+ E
Sbjct: 157 RDM----------------------------RFEVDMSKP----VSEVMTKAPLITAQEG 184
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ E A LL K +LP+VDG+GKL GLIT + V+
Sbjct: 185 VSAEAALGLLRRNKIEKLPIVDGHGKLTGLITVKDFVK 222
>gi|25027164|ref|NP_737218.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium efficiens
YS-314]
gi|23492445|dbj|BAC17418.1| IMP dehydrogenase [Corynebacterium efficiens YS-314]
Length = 513
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 33/130 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T++E RI+G PV+D D L+G+ ++ D+
Sbjct: 125 TIEEVDNLCARFRISGLPVVDKDGTLLGICTNRDM------------------------- 159
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
R S N ++V D+MTP PL+V E EDA +LL K +LP+VD KLV
Sbjct: 160 ------RFESDPN-RLVTDVMTPMPLIVAEEGVAKEDALQLLSTHKVEKLPIVDKNNKLV 212
Query: 212 GLITRGNVVR 221
GLIT + V+
Sbjct: 213 GLITVKDFVK 222
>gi|448629209|ref|ZP_21672608.1| CBS domain-containing IMP dehydrogenase/putative signal
transduction protein [Haloarcula vallismortis ATCC
29715]
gi|445757775|gb|EMA09116.1| CBS domain-containing IMP dehydrogenase/putative signal
transduction protein [Haloarcula vallismortis ATCC
29715]
Length = 263
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 39/156 (25%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TVGD+MT++ + V+ TV E R+ + +GFPV D ++ G VS DLL
Sbjct: 8 TVGDYMTRE--VATVELDDTVGEVARRIADNDHFSGFPVTDG-RRVEGFVSARDLL---- 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
L + ++ +MT LV H + ++DAAR+
Sbjct: 61 ----------LAEDHEPMFR-------------------VMTDDILVAHPDMAVQDAARV 91
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 92 ILRSGIQKLPVVDDAGHLVGIISNADVIRS--QIER 125
>gi|442804457|ref|YP_007372606.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740307|gb|AGC67996.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 213
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 19/142 (13%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ +A E + + I PV+ D KLVGVVS+ D+ T P+ +T
Sbjct: 19 TIPDAHEIMTKNNIRRLPVVKD-GKLVGVVSNLDI-------------TRATPS-PATSL 63
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
+ NEL +L+KT + +MT P+ + N LE+AA L+ + LPVVD GKLVG
Sbjct: 64 SINELTYILAKTK---ISKVMTKNPITISPNALLEEAAILMRDNGVSFLPVVDS-GKLVG 119
Query: 213 LITRGNVVRAALQIKRDGERST 234
+IT ++ + +++ E+ T
Sbjct: 120 IITESDIFDSFIELLGFREKGT 141
>gi|357024559|ref|ZP_09086708.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
gi|355543521|gb|EHH12648.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
Length = 214
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 21/152 (13%)
Query: 81 KKEDLHAVKTTTT-----VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
K +D+ V T V A +++ RI+G PV+D+D +LVGVVS+ D L +
Sbjct: 2 KAKDVMTVNVVTVSPDHGVRHAARIMLDHRISGLPVVDNDGRLVGVVSEGDFLRRSEL-- 59
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
+L PN ++ K + V DLMT +V E+T + A L+ E
Sbjct: 60 ---GVPALLPNEARSY----------VKGHSWKVSDLMTSDVIVADEDTTIARIAALMQE 106
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
+R+PV+ +LVG+++R +++R + K
Sbjct: 107 HGIKRIPVLR-RQRLVGVVSRADLLRVFVAAK 137
>gi|114567398|ref|YP_754552.1| CBS domain-containing protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338333|gb|ABI69181.1| CBS domain containing membrane protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 154
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 25/169 (14%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
G D MT+ ++ V +++E L+E++I+G PVID D ++G+V++ DL+
Sbjct: 2 GKMLAKDIMTR--EVITVGKNDSLEEVARILLEEKISGVPVIDADSYVIGIVTEKDLIVK 59
Query: 131 DSISGGNQNDTSLFPNV---------NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVH 181
S +LF ++ N+ K F Q V D MT ++V
Sbjct: 60 AS-ELKMPFYVTLFDSIIFLENPIRFNNNIKKFTASQ----------VEDAMTTKVIMVE 108
Query: 182 ENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E+T + ++ + + R+PVV +GKLVG+I+R +++++ +K++G
Sbjct: 109 EDTEVSRIVEIMQDKRVNRVPVV-RHGKLVGIISRNDILKSL--VKKNG 154
>gi|429196463|ref|ZP_19188423.1| hypothetical protein STRIP9103_08187 [Streptomyces ipomoeae 91-03]
gi|428667796|gb|EKX66859.1| hypothetical protein STRIP9103_08187 [Streptomyces ipomoeae 91-03]
Length = 119
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNEL----QRLLSKTNG 166
++D+D K++GV+S DL+A + + G F TF+ L +R +K N
Sbjct: 1 MVDEDDKVIGVISQTDLIARQAATPGPYEPRRRF--------TFSSLTRGARRQAAKANA 52
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
+ G LMT P+ H + + +AAR + + + RLPV+D
Sbjct: 53 RTAGRLMTEPPVTAHADDTIVEAARTMAQHQVERLPVLD 91
>gi|386360358|ref|YP_006058603.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383509385|gb|AFH38817.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 153
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
TT+D+ ++E+RI V+D+ +LVG+V++ D L G T P + +
Sbjct: 22 TTLDQVAALMLERRIGSVLVVDEKGRLVGIVTESDFLK----EKGIPFSTFRAPLLLGRF 77
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+L+R+L + V ++MT V L A +++L R+PVVD GK V
Sbjct: 78 LNGGQLERILQEAKATRVEEIMTAPVHTVAPEAPLRQALKVMLAYDINRVPVVDEEGKPV 137
Query: 212 GLITRGNVVR 221
G++ R +++R
Sbjct: 138 GVLARFDLLR 147
>gi|299068305|emb|CBJ39527.1| conserved protein of unknown function
(cystathionine-beta-synthase-CBS domain) [Ralstonia
solanacearum CMR15]
Length = 378
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T T D MT + T+V AL L + PVIDDD +L+G+V+ DL
Sbjct: 234 TLTCADIMTP--SVVTASAATSVPHALRLLQRHGVKALPVIDDDRRLIGIVTRADL---- 287
Query: 132 SISGGNQNDTSLFPNVN-STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
T P W T + T +V G +M P L + + + D
Sbjct: 288 ------AGTTPRVPRQRLRDWFTIGAM------TPPRVRG-VMNPRVLTIRADAPMADLV 334
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + +PVVD +G+L G++T+ +V+ A
Sbjct: 335 PMFASAGHHHIPVVDAHGRLAGILTQADVIHA 366
>gi|55378068|ref|YP_135918.1| inosine monophosphate dehydrogenase/GMP reductase [Haloarcula
marismortui ATCC 43049]
gi|448636538|ref|ZP_21675140.1| inosine monophosphate dehydrogenase/GMP reductase [Haloarcula
sinaiiensis ATCC 33800]
gi|448652798|ref|ZP_21681234.1| inosine monophosphate dehydrogenase/GMP reductase [Haloarcula
californiae ATCC 33799]
gi|55230793|gb|AAV46212.1| inosine monophosphate dehydrogenase/GMP reductase [Haloarcula
marismortui ATCC 43049]
gi|445766117|gb|EMA17253.1| inosine monophosphate dehydrogenase/GMP reductase [Haloarcula
sinaiiensis ATCC 33800]
gi|445768254|gb|EMA19340.1| inosine monophosphate dehydrogenase/GMP reductase [Haloarcula
californiae ATCC 33799]
Length = 263
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 39/156 (25%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TVGD+MT++ + V+ TV E R+ + +GFPV D ++ G VS DLL
Sbjct: 8 TVGDYMTRE--VATVELDDTVGEVARRIADNDHFSGFPVTDG-RRVEGFVSARDLL---- 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
L + ++ +MT LV H + ++DAAR+
Sbjct: 61 ----------LAEDHEPMFR-------------------VMTDDILVAHPDMAVQDAARV 91
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 92 ILRSGIQKLPVVDDAGHLVGIISNADVIRS--QIER 125
>gi|303247185|ref|ZP_07333459.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
gi|302491344|gb|EFL51232.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
Length = 152
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT D+ + T + A + L+EK G PV++ KL G++ DL+A
Sbjct: 6 DMMT--SDVVTITEDTEISAAAKLLLEKGFNGMPVLNAAGKLTGILCQADLVA------- 56
Query: 137 NQNDTSLFPNVNSTWKTF------NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
Q SL P+V S F +L R + K + M+ P V T +++ A
Sbjct: 57 QQKKLSL-PSVFSLLDGFIPLGSMKDLDREVEKMSALTAVHAMSRNPATVSPETGIDEVA 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
L+ + Y +PV D GK+VG+I +V+
Sbjct: 116 SLMTDKGYHTIPVTDAQGKVVGIIGMSDVL 145
>gi|456392581|gb|EMF57924.1| hypothetical protein SBD_0596 [Streptomyces bottropensis ATCC
25435]
Length = 217
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V + MT+ D+ + E ++ L E +T PV+DD +GVVS+ DLL S
Sbjct: 6 VEELMTR--DVVRARRDMPFKEIVKLLAENDVTAVPVVDDLDHPIGVVSEADLLRKSS-- 61
Query: 135 GGNQNDTSLFPNVN--STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
Q+D S V W+ +K G +LM+ + + +AAR
Sbjct: 62 --AQDDPSGLTPVPHLEAWER--------AKAEGASAEELMSAPAVCARPEWTVVEAARF 111
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ +RLPVVD G+L G+++RG+++R L+
Sbjct: 112 MSVRNVKRLPVVDEAGRLRGIVSRGDLLRIFLR 144
>gi|147678461|ref|YP_001212676.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274558|dbj|BAF60307.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
Length = 211
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 20/160 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT+ +L V T + EALE + + +I PV+ + L G+V++ +LL ++S
Sbjct: 3 VRDYMTR--NLITVDKKTGIFEALEIMKKHKIRQLPVVSAEGHLEGLVTEKELL---TVS 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
S++ EL LL+K V + M PL V +T LE+AA L+
Sbjct: 58 PSPATSLSIY-----------ELNYLLAKMT---VAEAMVKNPLTVTTDTTLEEAALLMR 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
E K +PV++G G++ G+IT ++ A ++ G+ T
Sbjct: 104 EHKIGSVPVMEG-GRIAGIITVTDIFDALVKFFGYGKAGT 142
>gi|87303510|ref|ZP_01086293.1| CBS protein [Synechococcus sp. WH 5701]
gi|87281923|gb|EAQ73886.1| CBS protein [Synechococcus sp. WH 5701]
Length = 144
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V TT + EA++ + + I+G PV+D+ L+ +S+ DL+ + SG + + +
Sbjct: 7 SVTPTTPLQEAVKLMSDHHISGLPVLDEQGALIAELSEQDLMVRE--SGFDAGPYVMLLD 64
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+ + + + + G VGD+M+ P L AA+LL + +RL V +G
Sbjct: 65 AVIYLRNPLDWDKQVHQVLGNTVGDVMSRHPHSCSAEVTLAAAAKLLHDRSTQRLFVREG 124
Query: 207 YGKLVGLITRGNVVRA 222
+VG++TRG+VVRA
Sbjct: 125 E-TVVGVLTRGDVVRA 139
>gi|340618018|ref|YP_004736471.1| hypothetical protein zobellia_2032 [Zobellia galactanivorans]
gi|339732815|emb|CAZ96148.1| CBS domain protein [Zobellia galactanivorans]
Length = 155
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 26/152 (17%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MTKK L K ++ E +E + I+G PV+DD+ LVG++S+ D + S S
Sbjct: 25 VSDYMTKK--LVTFKPDQSILEVMELFTKHNISGGPVMDDNGFLVGIISEADCMKQISES 82
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ FN Q +L K+ V MT + + ++ DAA +
Sbjct: 83 -----------------RYFN--QPILDKS----VEKFMTKEVETIPHDISIFDAASIFD 119
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ RRLPV+ G LVG I+R ++V AAL++
Sbjct: 120 KHNRRRLPVMKD-GILVGQISRKDIVIAALKL 150
>gi|259506701|ref|ZP_05749603.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium efficiens
YS-314]
gi|259165719|gb|EEW50273.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium efficiens
YS-314]
Length = 506
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 33/130 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T++E RI+G PV+D D L+G+ ++ D+
Sbjct: 118 TIEEVDNLCARFRISGLPVVDKDGTLLGICTNRDM------------------------- 152
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
R S N ++V D+MTP PL+V E EDA +LL K +LP+VD KLV
Sbjct: 153 ------RFESDPN-RLVTDVMTPMPLIVAEEGVAKEDALQLLSTHKVEKLPIVDKNNKLV 205
Query: 212 GLITRGNVVR 221
GLIT + V+
Sbjct: 206 GLITVKDFVK 215
>gi|256829700|ref|YP_003158428.1| hypothetical protein Dbac_1922 [Desulfomicrobium baculatum DSM
4028]
gi|256578876|gb|ACU90012.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
DSM 4028]
Length = 196
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D MT +H ++ + EA + I+G PV+D + ++ GVVS+ D L +
Sbjct: 53 TAEDIMTAP--VHCLQKGMSASEAAALMAGLGISGAPVLDVEGRICGVVSEKDYLRKMGL 110
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G T + +++ ++++LL V D+M+ P+V T + + + +L
Sbjct: 111 PGTASFMTVVSTCLSTPGCMVTDVRKLL-------VDDIMSSPPVVASRETPVAELSEML 163
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVV 220
RLP+ D G+ VG++TR ++V
Sbjct: 164 ARHSINRLPICDEEGRPVGIVTRTDLV 190
>gi|188584946|ref|YP_001916491.1| hypothetical protein Nther_0305 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349633|gb|ACB83903.1| CBS domain containing membrane protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 147
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS-IS-GGNQNDT 141
D+ V +TV+EA + + ++ I+G PVI+ LVG++++ DLL IS G
Sbjct: 10 DIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRISPPGYIEFL 69
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
S + F +L++ ++ V DLM+ + V +E+ A + + +RL
Sbjct: 70 GGIVFTESQDEFFEQLRKYVATQ----VKDLMSDQVVTVGPEAGIEEIATTMDQKNVKRL 125
Query: 202 PVVDGYGKLVGLITRGNVVRAAL 224
PVV G GKL+G+++R ++++A L
Sbjct: 126 PVV-GEGKLLGIVSRADLLKALL 147
>gi|86748495|ref|YP_484991.1| hypothetical protein RPB_1370 [Rhodopseudomonas palustris HaA2]
gi|86571523|gb|ABD06080.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
HaA2]
Length = 171
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 26/179 (14%)
Query: 48 VSREVKAFAHNGVGIT----NSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVE 103
+SR + A H + N V + TV D MT+ + V T+ E ++
Sbjct: 6 ISRCLDALCHRSCDGSPTDWNLVLYKFLEATVADHMTRS--VKPVTREMTMRELEDQFER 63
Query: 104 KRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSK 163
+PV++ + +G+V+ YD L + + T + P+ + L+++
Sbjct: 64 DDYNAYPVLEGS-RAIGLVTKYDFLNCFAF-----HPTQMLPHYDD----------LMNR 107
Query: 164 TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
T VGD+MTP + VH +T L +L++E + R +PV+D +L G+I+R +V++A
Sbjct: 108 T----VGDIMTPDFIYVHADTKLTRVLQLMVEHQTRSIPVLDADRRLEGIISREDVIKA 162
>gi|121595740|ref|YP_987636.1| signal transduction protein [Acidovorax sp. JS42]
gi|120607820|gb|ABM43560.1| putative signal transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 226
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 41 KRLRFFTVSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALER 100
K LR V A+ G V PR VGD MT V V++A +
Sbjct: 61 KPLRLLEA---VSAYVQTEQG---PVQPRQPLSRVGDVMTTGA--LTVAPDQRVNDAWQT 112
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
L E I PV++D ++VG++ D+ LD L P + + +R
Sbjct: 113 LAEHEIAQAPVVNDQGQVVGLLLRADMAPLD-----------LLPEPGAVKQAIELARRP 161
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+S+ +++P P V E+T L A +LL+T LPV D G L G I+R +++
Sbjct: 162 VSEV-------MVSPVP-TVAEDTELRRVAGVLLDTGLPGLPVTDERGLLAGFISRTDIL 213
Query: 221 RA 222
RA
Sbjct: 214 RA 215
>gi|397618554|gb|EJK64944.1| hypothetical protein THAOC_14262, partial [Thalassiosira oceanica]
Length = 277
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 32/183 (17%)
Query: 56 AHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD- 114
H G+ + +S P TV T D T VDEA+ +LV I+ PV++
Sbjct: 108 CHLGIRVQSS-PSSEELETVPHLFTLSPD-------TKVDEAISQLVSYSISSAPVVERL 159
Query: 115 --------DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNG 166
+LVG VS +D L + +T + T + +R+L G
Sbjct: 160 KDAETNQVFARLVGFVSSFDFLP--------REETGSLVTLGETKD--DVARRIL----G 205
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG-YGKLVGLITRGNVVRAALQ 225
+ V D+MT P+ V N N+++AA ++ + LPVVD +G VG+IT +V+R ++
Sbjct: 206 RTVEDVMTRDPISVTTNQNMKEAAEVMAGHRLHALPVVDAKHGHCVGIITAEDVMRDVMK 265
Query: 226 IKR 228
R
Sbjct: 266 TAR 268
>gi|407004025|gb|EKE20499.1| IMP dehydrogenase [uncultured bacterium]
Length = 151
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MTK D+ V TTV+ + L ++RI G PV+D D K++G+V++ + A +
Sbjct: 3 VKDIMTK--DVIFVFDHTTVNNVADILTKERIHGVPVVDKDRKVIGIVTETNFFA--KVD 58
Query: 135 GGNQNDTSLFPNVNSTWKT-FNELQRLLSKTNGKV---VGDLMTPAPLVVHENTNLEDAA 190
G D L V + K +++ L +K KV VGD+MT + V +E+
Sbjct: 59 G----DLYLSKFVKTIKKNKLPDVRDLKNKNEIKVETTVGDIMTKNCVTVSPEMKVEELF 114
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ + + +PVVD G L G+++ N++ ++++
Sbjct: 115 EVFRKKGFHTIPVVDKNGILEGIVSLANIIAISVKL 150
>gi|299132348|ref|ZP_07025543.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298592485|gb|EFI52685.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 228
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MTK L +V V EA + +V I+ V+D+ LVG++S+ DLL ++
Sbjct: 3 VRDVMTKH--LVSVLPNVHVREAAKMMVGNGISALTVVDERGSLVGLLSEGDLLHRRELN 60
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLS----KTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ S W R L+ K+N ++V D+MT L + L D A
Sbjct: 61 TETRR---------SWWLDLFASDRDLAADYVKSNSRMVRDVMTTKVLTASPDDTLGDVA 111
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
R + +RLPV++ G L+G+ITR N+V+A K
Sbjct: 112 RRFEKHHIKRLPVIEN-GHLIGIITRANLVQALANTK 147
>gi|260424707|ref|ZP_05733025.2| putative CBS domain protein [Dialister invisus DSM 15470]
gi|260402912|gb|EEW96459.1| putative CBS domain protein [Dialister invisus DSM 15470]
Length = 176
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-------- 128
DFMTK + ++ TV E ++ V ++ PV+ DD +L+G+VS+ DLL
Sbjct: 16 DFMTKY--VFSIPPDVTVHELVKLFVTHPVSAVPVVGDDNELLGIVSEGDLLYKKVKPKV 73
Query: 129 -ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
A I G N + F +R K DLMT V T++E
Sbjct: 74 PAYLDILGAN-----------IYYCGFGRYERSFRKLLATQAADLMTKDVRCVTPETDME 122
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L+++ + +PVV+ +LVG+ITR +++ A
Sbjct: 123 TIMNLMIDEHLKTVPVVEKPNRLVGIITRHDILGA 157
>gi|303245552|ref|ZP_07331835.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
gi|302492815|gb|EFL52680.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
Length = 220
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+M+K K T++ +A + + E PV+DD+ +LVG+VSD D+
Sbjct: 3 IKDWMSKSP--VTAKPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDI------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ +GD+MT + V + +E AA LLL
Sbjct: 54 ------KEASPS-KATTLDMHELYYLLSEIK---IGDIMTKTVVAVTPDDTVEKAAVLLL 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
LPVVD K+VG+IT ++ + + I
Sbjct: 104 RHNVGGLPVVDDDNKVVGVITDSDIFKVLVSI 135
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D M+ +P+ T++ AA+++ E Y RLPVVD G+LVG+++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDIKEAS 57
>gi|435852150|ref|YP_007313736.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
gi|433662780|gb|AGB50206.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
Length = 157
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI- 133
V D M D+ TT+ EA + L + I+G PV+++ ++VG+VS+ DLL L +
Sbjct: 3 VKDIMNT--DVIVCDPHTTISEASQLLKKHNISGLPVVEEG-RVVGIVSEGDLLKLLEVP 59
Query: 134 SGGNQNDTSLFPNVNSTWK---TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
G S F + + + E + +L K V ++M ++ +++DA
Sbjct: 60 EHGGLWLPSPFEVIEIPIRELLNWEETKHMLDDIGSKPVSEIMQKNVHLISPENSIQDAV 119
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
RL+ + K RLPVV+ LVG+ITRG+++
Sbjct: 120 RLITKHKVNRLPVVED-DILVGIITRGDIIHG 150
>gi|392390812|ref|YP_006427415.1| inosine-5''-monophosphate dehydrogenase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521890|gb|AFL97621.1| inosine-5''-monophosphate dehydrogenase [Ornithobacterium
rhinotracheale DSM 15997]
Length = 489
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 46/197 (23%)
Query: 26 HLQLPITVATPSHLSKRLRFFTVSREVK-AFAHNGVGITNSVPPRNGTYTVGDFMTKKED 84
L +PI A +S+ ++RE AF H + I D + + E+
Sbjct: 42 QLNIPIVSAAMDTVSEAKLAIALAREGGLAFIHKNMTIEQQAKEI-------DMVKRSEN 94
Query: 85 LHAVKTTT-----TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQN 139
T T+++A + RI+G PVI +D L+G++++ D+ Q
Sbjct: 95 GMIANPITLHPDQTLEDAENLMRTYRISGLPVIKEDRTLIGILTNRDIR--------YQT 146
Query: 140 DTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE-NTNLEDAARLLLETKY 198
D S + V D+MT APLV + NT+L+DA +LL+ +
Sbjct: 147 DMS------------------------QKVTDVMTKAPLVTSDINTSLDDAKEILLKNRI 182
Query: 199 RRLPVVDGYGKLVGLIT 215
+LP+VD KL+GLIT
Sbjct: 183 EKLPIVDKDNKLIGLIT 199
>gi|295681015|ref|YP_003609589.1| signal transduction protein [Burkholderia sp. CCGE1002]
gi|295440910|gb|ADG20078.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 230
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ +A + V+ I+G PV+ + +++G+VS DLL G+ ++S+ +
Sbjct: 19 TIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLLHRVENGTGHGKRRWWLELLSSSAR 78
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
E K +G VVGD+M + + E+ L A L+ +R+PV+ G+LVG
Sbjct: 79 ---EQAARYVKEHGHVVGDVMCENVISIPEDMPLHQIADLMERRHLKRVPVLKD-GQLVG 134
Query: 213 LITRGNVVRA 222
+++R N++RA
Sbjct: 135 IVSRSNLIRA 144
>gi|302549210|ref|ZP_07301552.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302466828|gb|EFL29921.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 223
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T+G+ MT+ + V+ T L + +T PV+D+ +GVVS+ DLL +
Sbjct: 5 TIGELMTRP--VVRVRRDTPFKGVAGLLADHDVTALPVVDELDHPIGVVSEADLLRTIA- 61
Query: 134 SGGNQNDTSLFPN-VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ + N SL P V+ T +G G+LMT + + +AARL
Sbjct: 62 ARPDPNGLSLPPAPVDGTLSA-----------DGTTAGELMTAPAVCARPEWTVVEAARL 110
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ +RLPVVD G L+G+++RG+++R L+
Sbjct: 111 MDVEGVKRLPVVDEAGTLIGIVSRGDLLRVFLR 143
>gi|146320503|ref|YP_001200214.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|253751473|ref|YP_003024614.1| hypothetical protein SSUSC84_0586 [Streptococcus suis SC84]
gi|253753374|ref|YP_003026515.1| hypothetical protein SSU0613 [Streptococcus suis P1/7]
gi|253755797|ref|YP_003028937.1| hypothetical protein SSUBM407_1211 [Streptococcus suis BM407]
gi|386577642|ref|YP_006074048.1| hypothetical protein [Streptococcus suis GZ1]
gi|386579699|ref|YP_006076104.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|386581647|ref|YP_006078051.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|386587880|ref|YP_006084281.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|403061284|ref|YP_006649500.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
gi|145691309|gb|ABP91814.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|251815762|emb|CAZ51364.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818261|emb|CAZ56069.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251819620|emb|CAR45355.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|292558105|gb|ADE31106.1| hypothetical protein SSGZ1_0647 [Streptococcus suis GZ1]
gi|319757891|gb|ADV69833.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|353733793|gb|AER14803.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|354985041|gb|AER43939.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|402808610|gb|AFR00102.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
Length = 218
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 21/159 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V DFMT+K + + TTV A + + E+ + PVI++D KLVG+V++
Sbjct: 2 SVKDFMTRK--VVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVTE--------- 49
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + S P+ +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 50 --GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD G+L G+IT ++ A L + GE
Sbjct: 102 YKNKVGILPVVDN-GQLYGVITDRDIFAAFLHVSGYGEE 139
>gi|443323877|ref|ZP_21052856.1| chloride channel protein EriC [Xenococcus sp. PCC 7305]
gi|442796329|gb|ELS05620.1| chloride channel protein EriC [Xenococcus sp. PCC 7305]
Length = 875
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 40/163 (24%)
Query: 77 DFMTK-------KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129
DF+T+ + + + T T++E + + GFPV+ D KLVG+++ D+
Sbjct: 447 DFLTELTAEDVMQSQVETLATNLTIEEVVTAMSLSHHRGFPVVKGD-KLVGIITQSDIA- 504
Query: 130 LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
++++R+ G + D+MTP P+ V + +L D
Sbjct: 505 -------------------------DDMKRM----EGLFLEDIMTPQPITVSPDISLADV 535
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
LL + RLPV +G KLVG+ITR ++++ Q + G+R
Sbjct: 536 LYLLSRYQLSRLPVTEG-NKLVGIITRSDIIKVEAQ-RLSGDR 576
>gi|256828518|ref|YP_003157246.1| hypothetical protein Dbac_0707 [Desulfomicrobium baculatum DSM
4028]
gi|256577694|gb|ACU88830.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
DSM 4028]
Length = 221
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+MTK D+ V T++ A + + EK I PV+DD K++G++SD D+
Sbjct: 3 IKDWMTK--DVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDV------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ V ++MTP+PL + E + A ++
Sbjct: 54 ------KEASPSKATTL-DVHELYYLLSEIK---VKNIMTPSPLTIRETDTVVKCAAIMH 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPV++ +LVG++T+ V L I
Sbjct: 104 DKKISGLPVLNDKDELVGIMTQNEVYSVLLSI 135
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D MT + V T++ AA+L+ E RRLPVVD GK++G+++ +V A+
Sbjct: 2 IIKDWMTKDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDVKEAS 57
>gi|219848817|ref|YP_002463250.1| hypothetical protein Cagg_1919 [Chloroflexus aggregans DSM 9485]
gi|219543076|gb|ACL24814.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 409
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 111 VIDDDWKLVGVVSDYDLLALDSISGGNQND--TSLFPNVNSTWKTFNELQRLLSKTNGKV 168
V+D D ++VGV L L + Q+D TSL + ST + +Q +
Sbjct: 301 VVDGDRRVVGV------LRLSKVLSNLQDDERTSLLTALQSTQR----VQPTALPGARRT 350
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + P P V+ NT+L AAR LL RLPVVD G+L G+I RG +VRA LQ
Sbjct: 351 IDAFLEPPPPVLAINTSLGVAARQLLTMNTERLPVVDSEGRLSGIIARGALVRALLQ 407
>gi|281208518|gb|EFA82694.1| putative acetoin dehydrogenase [Polysphondylium pallidum PN500]
Length = 227
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 21/136 (15%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-LALDSI 133
V MTK +++V +T+D AL+ L I PVIDDD L G+++D DL LA DS
Sbjct: 13 VKHLMTKT--IYSVSMDSTLDMALKCLNTHSIHRIPVIDDDGNLKGIITDRDLRLACDS- 69
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
P N +R++ + K V +M PL + EN+ + D A+LL
Sbjct: 70 --------PFLPESNE--------ERVMKLSQHK-VSQVMKNNPLTIEENSPVVDVAKLL 112
Query: 194 LETKYRRLPVVDGYGK 209
+ LPVVD GK
Sbjct: 113 RVSDVGGLPVVDNNGK 128
>gi|120601585|ref|YP_965985.1| hypothetical protein Dvul_0535 [Desulfovibrio vulgaris DP4]
gi|120561814|gb|ABM27558.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
Length = 256
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 19/158 (12%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+ T + ++MT+ ++ V T++ +A + + E PV+D + KL+G+VSD D+
Sbjct: 26 KEATMLIREWMTR--NVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDI- 82
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
P+ +T +EL LLS+ V D+MT P+ V + +E
Sbjct: 83 ------------KEASPSKATTLD-MHELYYLLSEIK---VKDIMTRDPICVQPDETVER 126
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
A L++E +PVVD G+LVG+IT ++ + + I
Sbjct: 127 VALLMIEKHIGGMPVVDEEGQLVGIITDSDIFKVLIAI 164
>gi|219853206|ref|YP_002467638.1| signal transduction protein with CBS domains [Methanosphaerula
palustris E1-9c]
gi|219547465|gb|ACL17915.1| putative signal transduction protein with CBS domains
[Methanosphaerula palustris E1-9c]
Length = 161
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN- 146
++ V EA + EK + G PV+D +LVG+V+D DLL+L + G+ +D P+
Sbjct: 14 IQADAMVSEAARTMREKHVGGLPVLDGT-RLVGMVTDSDLLSL--LKTGDLSDDLWLPSP 70
Query: 147 ---VNSTWKTFNELQR---LLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
+ + F ++ L +G V ++M+ + + + + +AA ++L K R
Sbjct: 71 LEIIEVPIREFINWEKTRGALRDISGMKVREVMSVPAITIDQEAEISEAAAVMLREKIVR 130
Query: 201 LPVVDGYGKLVGLITRGNVVRA 222
LPV+D LVG++TR ++V+
Sbjct: 131 LPVMDKR-TLVGIVTRSDIVQG 151
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
V ++MT PLV+ + + +AAR + E LPV+DG +LVG++T +++
Sbjct: 3 VSEIMTTNPLVIQADAMVSEAARTMREKHVGGLPVLDGT-RLVGMVTDSDLL 53
>gi|120609584|ref|YP_969262.1| hypothetical protein Aave_0890 [Acidovorax citrulli AAC00-1]
gi|120588048|gb|ABM31488.1| CBS domain containing membrane protein [Acidovorax citrulli
AAC00-1]
Length = 383
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
G GD M+++ A T + EA + +RI PV+D ++VG+V+ D +
Sbjct: 236 GQLRCGDIMSREPVTAAFGTG--LQEAWALMRRRRIKALPVVDRARRIVGIVTTADFM-- 291
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
Q D + + + + T +VVG +MT VV E +
Sbjct: 292 ------RQIDLDVHHGIGEQLRALVRRVGAVHSTKPEVVGQIMTRQVRVVSERRPALELV 345
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L E + +PV+D +LVG+IT+ ++VRA
Sbjct: 346 PLFTEDGHHHIPVIDEERRLVGIITQSDLVRA 377
>gi|408419370|ref|YP_006760784.1| hypothetical protein TOL2_C19190 [Desulfobacula toluolica Tol2]
gi|405106583|emb|CCK80080.1| CBS domain protein [Desulfobacula toluolica Tol2]
Length = 154
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 23/157 (14%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D M K+D+ ++ T + +A+E L+ I G PV+D + L G++ DL+
Sbjct: 3 TAKDIM--KKDVISISPDTDITKAVEILLSNHINGVPVVDSNGILKGILCQSDLIF---- 56
Query: 134 SGGNQNDTSLFP---------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
Q D P ++S+ K +EL+++ + V M P+ VH +T
Sbjct: 57 ---AQKDIPFPPIFVLLDGIIPLSSSKKLNSELKKIAATK----VEQAMVKNPISVHPDT 109
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ + A L++E + LPVVD KLVG+I + ++++
Sbjct: 110 PVSEIASLMVEKHFHTLPVVD-KNKLVGIIGKEDILK 145
>gi|405372577|ref|ZP_11027652.1| Inosine-5'-monophosphate dehydrogenase [Chondromyces apiculatus DSM
436]
gi|397088151|gb|EJJ19148.1| Inosine-5'-monophosphate dehydrogenase [Myxococcus sp. (contaminant
ex DSM 436)]
Length = 143
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 27/158 (17%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG+ MT+ D+ +K T + +A E L RI PV+ D KLVG+++ DLL +
Sbjct: 4 VGELMTR--DVVTLKETQNLAKADELLRLHRIRHLPVVRQD-KLVGLITHRDLL---RAA 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ ND P + W D+MT V T L+ A ++L
Sbjct: 58 ATHAND----PAAHPLW-----------------AADIMTRDVKTVRPETPLKRAVTMML 96
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ KY LPVVD G L GL+T ++VR A + + +R
Sbjct: 97 DHKYGCLPVVDETGTLQGLLTEADLVRYARYLIEEQDR 134
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++VG+LMT + + E NL A LL + R LPVV KLVGLIT +++RAA
Sbjct: 2 QIVGELMTRDVVTLKETQNLAKADELLRLHRIRHLPVV-RQDKLVGLITHRDLLRAA 57
>gi|304315406|ref|YP_003850553.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588865|gb|ADL59240.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 269
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 42/160 (26%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT+ D+ V + T+ E ++ + E GFPV D+ ++G+V+ +DLL
Sbjct: 7 VKDYMTR--DVITVSSDTSTAEIIKLMKETGHDGFPV-KDNGTVIGMVTAFDLL------ 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ P V K V ++M+ +V ++ +L DAAR++
Sbjct: 58 --------IKPWV-------------------KTVSEIMSRDVVVADQDMSLNDAARVMF 90
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
RLPV+D GKLVG+IT ++VR+ + ERST
Sbjct: 91 RMGISRLPVIDKEGKLVGIITNTDIVRSHI------ERST 124
>gi|222149685|ref|YP_002550642.1| hypothetical protein Avi_3655 [Agrobacterium vitis S4]
gi|221736667|gb|ACM37630.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 389
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R+ T G M + A+ TT+ EAL RL + R+ PV +D ++G+V+ DL+
Sbjct: 237 RSSHTTCGAVMIA--GVAALSPDTTLSEALHRLRQSRVKALPVTAEDATILGIVTQTDLM 294
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
S S G P + + LQ S NG V D+MT V + L +
Sbjct: 295 DKASWSRGR-------PMIGLGRRLALALQG-ASAPNG-TVKDIMTTPVRTVTPDAPLSE 345
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
A E LPV++ KL+G+I + +V+ A +Q R
Sbjct: 346 AIVTFAEAALHHLPVINAQAKLIGMIAQTDVLMAMVQASNQKAR 389
>gi|334340400|ref|YP_004545380.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334091754|gb|AEG60094.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 148
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS--------- 132
+ D+ V T+ E E LV I+G PV+D+ LVG+V++ DLL +S
Sbjct: 8 RSDVITVTKDMTIQEVAEVLVTHNISGVPVVDEAGSLVGMVTEGDLLHKESNPRIPKFFG 67
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ GG F V+ + F +L L + ++MT + V + A L
Sbjct: 68 LLGG----LIYFGGVDQYKEDFKKLAALKA-------AEIMTSKVITVSGEEEVGQVATL 116
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+++ +R+PVV+ GK++G+++R ++V+
Sbjct: 117 MIDNNIKRIPVVEN-GKMIGIVSRADIVK 144
>gi|227494839|ref|ZP_03925155.1| IMP dehydrogenase [Actinomyces coleocanis DSM 15436]
gi|226831291|gb|EEH63674.1| IMP dehydrogenase [Actinomyces coleocanis DSM 15436]
Length = 504
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 31/128 (24%)
Query: 96 EALERLVEK-RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTF 154
E L+RL + R++G PV+D D KL+G++++ DL P W T
Sbjct: 112 EELDRLCGRYRVSGLPVVDADNKLLGIITNRDL--------------RFVPT--EEWST- 154
Query: 155 NELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLVGL 213
+ V D MTP PL+ H + E+A LL + +LP+VD G+L GL
Sbjct: 155 ------------RRVSDCMTPMPLITGHVGISREEAKALLATNRIEKLPLVDDEGRLAGL 202
Query: 214 ITRGNVVR 221
IT + V+
Sbjct: 203 ITVKDFVK 210
>gi|295681503|ref|YP_003610077.1| XRE family transcriptional regulator [Burkholderia sp. CCGE1002]
gi|295441398|gb|ADG20566.1| putative transcriptional regulator, XRE family [Burkholderia sp.
CCGE1002]
Length = 229
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT + + ++ ++V +A + L + +I+G PV+DD ++G+VS+ DLL
Sbjct: 5 DIMTTQ--VVSIAPDSSVYDAAKLLADSKISGMPVLDDTGSVIGIVSEGDLL-------- 54
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLS----KTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ +T S F R L+ K V D+M+ + V E+ L A L
Sbjct: 55 RRVETGTETPRRSWLAQFIAPTRQLAVEYLKERSIRVRDVMSAPAVTVDESAPLTAVAEL 114
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L +RLPV+ GKLVG+++R N+VRA
Sbjct: 115 LGRKHIKRLPVLRD-GKLVGIVSRANLVRA 143
>gi|429195458|ref|ZP_19187490.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428668824|gb|EKX67815.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 234
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT + A+ + E + + E +++ PV++ + +VGVVS+ DLL +
Sbjct: 6 HIVSDVMTHT--VAAIGRGASFKEIVRMMQEWKVSALPVLEGEGLVVGVVSEADLLHKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRL--LSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+S +L+RL L+K G+LMT L V + L AA
Sbjct: 64 FR-------------DSDPDRHTQLRRLSDLAKAGAVTAGELMTSPALTVRADATLAQAA 110
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
R + K +RLPVVD G L G+++R ++++ L RD E
Sbjct: 111 RAMARAKVKRLPVVDELGMLQGIVSRADLLKVFL---RDDE 148
>gi|386844837|ref|YP_006249895.1| transport protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374105138|gb|AEY94022.1| putative transport protein [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798127|gb|AGF68176.1| putative transport protein [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 224
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + M++ D+ + T E + L E +T PV+D+ + +GVVS+ DLL S
Sbjct: 5 TVEELMSR--DVVRARRDTPFKELVRLLEENGVTAVPVVDELDRPLGVVSEADLLR-KSA 61
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ + + P++ + W+ +K G +LM+ + + +AARL+
Sbjct: 62 DQADPSGRTPIPHLEA-WER--------AKAEGSRAEELMSAPAVCARPEWTVVEAARLM 112
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+RLPVVD +L+G+++RG+++R L+
Sbjct: 113 ETQNVKRLPVVDETDRLLGIVSRGDLLRVFLR 144
>gi|358446955|ref|ZP_09157493.1| IMP dehydrogenase [Corynebacterium casei UCMA 3821]
gi|356607147|emb|CCE55845.1| IMP dehydrogenase [Corynebacterium casei UCMA 3821]
Length = 506
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 40/154 (25%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R+ + V D +T D+ T VD+ R RI+G PV+DD+ L+G+ ++ D+
Sbjct: 100 RSESGMVTDPVTANPDM----TIQEVDDLCARF---RISGLPVVDDEGTLLGICTNRDM- 151
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLE 187
+R S+ V D+MT PLVV E + E
Sbjct: 152 ---------------------------RFERDYSRK----VSDIMTAMPLVVAKEGVSKE 180
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+A LL K +LP+VDG KLVGLIT + V+
Sbjct: 181 EALELLSANKVEKLPIVDGNNKLVGLITVKDFVK 214
>gi|433422911|ref|ZP_20406106.1| SpoIVFB-type metallopeptidase [Haloferax sp. BAB2207]
gi|432198493|gb|ELK54770.1| SpoIVFB-type metallopeptidase [Haloferax sp. BAB2207]
Length = 390
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E+L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGRENLDVVDEKTSVAELLERMFVERHTGYPVLRNG-DLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELATITPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPVVD G+LVGL++R ++V A
Sbjct: 338 QERGVGRLPVVDEAGELVGLVSRSDLVTA 366
>gi|73668035|ref|YP_304050.1| hypothetical protein Mbar_A0488 [Methanosarcina barkeri str.
Fusaro]
gi|72395197|gb|AAZ69470.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 39/153 (25%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P+N + D M + D+ + + DE L+ L K I+G PV+ D K+VGVV+ +L
Sbjct: 20 PKN--IFIEDIMVR--DVASATLPGSRDEVLKILKNKHISGVPVLKDS-KVVGVVTRTNL 74
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L QN E Q L LMT P+ + ++L+
Sbjct: 75 L---------QNP--------------EEEQLAL----------LMTRGPITISSGSDLQ 101
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
AARLLLE RRLPVVD GKLVGL+T +++
Sbjct: 102 TAARLLLEHHIRRLPVVDD-GKLVGLVTVADII 133
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 62 ITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGV 121
I ++ N + D++ K ++ A+ + T + A + + PV+D + +L+G+
Sbjct: 132 IIGTIADMNIDIPIKDYVEK--EVVAIYSETPLPVAARIMELAGVKAVPVLDSNLELIGI 189
Query: 122 VSDYDLLA---------LDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDL 172
+SD D++A + +S G +D + ++ T + + R+ K + D+
Sbjct: 190 ISDRDVIAASIIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYSVSRI--KVPNLIGSDI 247
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
M P+ T++ D AR + + ++P+++ KL GL+ ++++ ++++
Sbjct: 248 MIREPITATYITSVSDCARKMKRNRIDQVPIINSNRKLQGLLRDHDLLKPLIELE 302
>gi|317489686|ref|ZP_07948190.1| CBS domain pair [Eggerthella sp. 1_3_56FAA]
gi|325830283|ref|ZP_08163740.1| CBS domain protein [Eggerthella sp. HGA1]
gi|316911280|gb|EFV32885.1| CBS domain pair [Eggerthella sp. 1_3_56FAA]
gi|325487750|gb|EGC90188.1| CBS domain protein [Eggerthella sp. HGA1]
Length = 162
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL--- 130
T+GD M + D + + + E + E +G VID+D +VG +SD D++
Sbjct: 4 TIGDIMER--DAYTCRYDQNLGEVVTLFNELGTSGLVVIDEDRHVVGFISDGDIMKAVAA 61
Query: 131 ---DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
SI G ++ L+ + ++F E R L + N V +L L + +
Sbjct: 62 QKTRSIFSGGYSNMVLYDS-----ESFEEKARALKRRN---VMELAVQRVLCATADQTIG 113
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ A +L + K++++PV+D G+L+G++ R + R
Sbjct: 114 EIADVLAKKKFKKVPVIDEDGRLIGMVRRATITR 147
>gi|260060968|ref|YP_003194048.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
gi|88785100|gb|EAR16269.1| CBS domain protein [Robiginitalea biformata HTCC2501]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 26/152 (17%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT+ +L + ++ E +E RI+G PV+DD+ LVG+VS+ D + S S
Sbjct: 41 VSDYMTR--NLVTFRPDQSILEVMEAFTRHRISGGPVLDDNGFLVGIVSEADCMKQISES 98
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ FN Q +L K+ V MT + + ++ DAA +
Sbjct: 99 -----------------RYFN--QPILDKS----VERFMTKEVETIPHDMSIFDAAGVFH 135
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ RRLPV+ G L+G I+R ++V AAL++
Sbjct: 136 KNNRRRLPVMKD-GLLIGQISRKDIVVAALKL 166
>gi|379727483|ref|YP_005319668.1| hypothetical protein MPD5_0940 [Melissococcus plutonius DAT561]
gi|376318386|dbj|BAL62173.1| CBS domain containing protein [Melissococcus plutonius DAT561]
Length = 167
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
G F+ E++ V ++ ++ A+ L + + + PV+D + + VG++S D++
Sbjct: 15 GSFLIPAENVANVMSSHPLNHAVLVLSKVKYSKIPVLDKNDQFVGLISLADIMG------ 68
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
K F+ L N V D+M V+HE+ LED L++
Sbjct: 69 ----------------KMFSMTSIDLKNLNKYTVSDVMEREVTVIHEDWELEDVLHFLVD 112
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
T + LPVVD Y G+ITR +++A + + E+S
Sbjct: 113 TSF--LPVVDKYQCFKGIITRKEILKAVNHLAHELEKS 148
>gi|357634461|ref|ZP_09132339.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357583015|gb|EHJ48348.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 220
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+M+K K T++ +A + + E PVIDD+ +L G+VSD D+
Sbjct: 3 IKDWMSKSP--VTAKPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDI------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ V D+MT + + + +E AA L+L
Sbjct: 54 ------KEASPS-KATTLDMHELYYLLSEIK---VADIMTKKVIFIGPDDTVEKAAVLML 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
LPVVDG K+VG+IT ++ + + I
Sbjct: 104 RNNVSGLPVVDGDSKVVGVITDSDIFKVLVNI 135
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D M+ +P+ T++ AA+L+ E + RLPV+D G+L G+++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDIKEAS 57
>gi|253995397|ref|YP_003047461.1| hypothetical protein Mmol_0023 [Methylotenera mobilis JLW8]
gi|253982076|gb|ACT46934.1| CBS domain containing membrane protein [Methylotenera mobilis JLW8]
Length = 394
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 11/155 (7%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R G D M+K D+ +V T +++A + + +I PVID ++VG+++ + +
Sbjct: 234 RFGEIICADIMSK--DVVSVVFGTLLEDAWLLMRQHQIKALPVIDRARRVVGIITQANFM 291
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
+ ++ + K+F LS +VVG +MT + N ++ +
Sbjct: 292 --------QHANLEVYEGFETKLKSFIRRTHTLSSHKPEVVGQIMTSPAVTATANMHIIE 343
Query: 189 AARLLLETK-YRRLPVVDGYGKLVGLITRGNVVRA 222
L+ +TK + +PVVD +LVG++T+ ++V A
Sbjct: 344 LIPLMSQTKVHHHIPVVDDERRLVGMVTQSDLVSA 378
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 146 NVNSTWKTFNE--------LQRLLSKTN--------GKVV-GDLMTPAPLVVHENTNLED 188
++N+ K +N+ LQ LL +T G+++ D+M+ + V T LED
Sbjct: 200 DLNAVLKEYNQVLDVSRDDLQSLLQQTEMHAYRRRFGEIICADIMSKDVVSVVFGTLLED 259
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
A L+ + + + LPV+D ++VG+IT+ N ++ A
Sbjct: 260 AWLLMRQHQIKALPVIDRARRVVGIITQANFMQHA 294
>gi|237511946|gb|ACQ99689.1| putative bile efflux protein [Bifidobacterium breve UCC2003]
gi|339479060|gb|ABE95522.1| Multidrug resistance protein B, MFS member, bile efflux, induced
upon bile salt exposure [Bifidobacterium breve UCC2003]
Length = 683
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D+L SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVV+G G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVTATPDQHVGEVARILAKKQFKKLPVVNGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|289523011|ref|ZP_06439865.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503554|gb|EFD24718.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 492
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 33/131 (25%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
T+ +A+ + I+G P++D D KLVG++++ DL
Sbjct: 110 TLRDAVALMEHYHISGVPIVDADMKLVGIITNRDL------------------------- 144
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
R ++ + + + D+MT L+V H T LEDA +L++ K +LP+VD G+L
Sbjct: 145 ------RFITDYD-QPIKDVMTKENLIVSHIGTTLEDAKAILMKHKVEKLPIVDSEGRLK 197
Query: 212 GLITRGNVVRA 222
GLIT ++++A
Sbjct: 198 GLITIKDIIKA 208
>gi|254380638|ref|ZP_04996004.1| CBS [Streptomyces sp. Mg1]
gi|194339549|gb|EDX20515.1| CBS [Streptomyces sp. Mg1]
Length = 218
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ 138
MT K + +V T+T+ + + L + I+G PV+D+ +++GV+S+ DL+ +
Sbjct: 1 MTDK--VASVVTSTSFKDVAKLLAQHDISGLPVLDEQDRVLGVISESDLIVRQTAEHPLM 58
Query: 139 NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
+D ++ +F G++M+ + VH AARL+
Sbjct: 59 SDAPCGRGTFASEVSFT-------------AGEVMSAPAVTVHAEETAAGAARLMARRGI 105
Query: 199 RRLPVVDGYGKLVGLITRGNVV 220
RLPVVD +LVG++TR +++
Sbjct: 106 ERLPVVDEEDRLVGIVTRRDLL 127
>gi|448573376|ref|ZP_21640960.1| SpoIVFB-type metallopeptidase [Haloferax lucentense DSM 14919]
gi|445719141|gb|ELZ70824.1| SpoIVFB-type metallopeptidase [Haloferax lucentense DSM 14919]
Length = 390
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E+L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGRENLDVVDEKTSVAELLERMFVERHTGYPVLRNG-DLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELATITPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPVVD G+LVGL++R ++V A
Sbjct: 338 QERGVGRLPVVDEAGELVGLVSRSDLVTA 366
>gi|397904553|ref|ZP_10505459.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
gi|397162411|emb|CCJ32793.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
Length = 143
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 30/145 (20%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT ++ V T V E + + +K + PV+D D K+VG+V+D D++ D
Sbjct: 3 VKDFMTT--NVAYVTPNTPVVEIAKIMKDKNVGSVPVLDGD-KVVGIVTDRDIVLRDIAF 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G N N+ +L+K D+MT + N ++ DAAR++
Sbjct: 60 GKNPNE-------------------VLAK-------DVMTVGVTTANPNMDIHDAARIMA 93
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNV 219
E + RRLPVV+ G+LVG++ G++
Sbjct: 94 EKQVRRLPVVEN-GRLVGMLAIGDI 117
>gi|257095774|ref|YP_003169415.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048298|gb|ACV37486.1| CBS domain containing membrane protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 203
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 29/177 (16%)
Query: 48 VSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRIT 107
V++ V A+ + S P R Y M ++ + +V +T V+ A L+E+RI
Sbjct: 47 VAQAVSAYRE----MLRSDPERGPLYHAYQIMQRQ--IVSVTSTDAVERAWRILLERRIH 100
Query: 108 GFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGK 167
PV+D ++LVG+VS+ DLL + ++ G D +
Sbjct: 101 QAPVLDPTYRLVGIVSERDLLTVLNVEEGRVRDAL-----------------------AR 137
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
V D+MT + T++ A ++LE + +P+V+ LVG ++R +++RA +
Sbjct: 138 QVSDVMTTPVVSADPITDIRRIAWVMLEHQVDGVPIVNDTQALVGFVSRSDILRAII 194
>gi|453054062|gb|EMF01518.1| hypothetical protein H340_05761 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 226
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVD-EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL-- 130
+VG+ MT E HA T D L RL +R++G PV+D D K++GVVS+ DLL L
Sbjct: 5 SVGEIMTS-EVAHARADTPHRDLVTLLRL--RRVSGVPVVDHDDKVIGVVSEADLLRLRT 61
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
D G++ P + + T LM+ + VH DAA
Sbjct: 62 DGTGAGHRGRWPGLPPLVPVPRRLGAGAARAPVTAAA----LMSTPAVTVHPYQRAADAA 117
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
R++ RLPVVD +L+G++TR +++R
Sbjct: 118 RVMDRHHVNRLPVVDEEDRLIGIVTRHDLLR 148
>gi|357420278|ref|YP_004933270.1| signal transduction protein with CBS domains [Thermovirga lienii
DSM 17291]
gi|355397744|gb|AER67173.1| putative signal transduction protein with CBS domains [Thermovirga
lienii DSM 17291]
Length = 152
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+G+ M + DL A+ TT+ EA+E L R++G PV D++ +LVG +S+ D++ ++
Sbjct: 3 IGELMDR--DLTALFPETTIAEAVEVLSTHRVSGLPVADEEGRLVGFISENDIIRA-ALP 59
Query: 135 GGNQ--NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
G D S P+ F + + L K + V M + EN + A +
Sbjct: 60 GYFDFLKDPSFLPD-------FGQFGKRLLKISNDPVEKYMVKKVIAFDENDSDFQVAMI 112
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
++++ +R PV+ G VG+++R +++ L+ R+ S
Sbjct: 113 MMKSNLKRAPVLSN-GIFVGMVSRADLLDRILRSAREEAES 152
>gi|339444250|ref|YP_004710254.1| major facilitator superfamily permease [Eggerthella sp. YY7918]
gi|338904002|dbj|BAK43853.1| permease of the major facilitator superfamily [Eggerthella sp.
YY7918]
Length = 641
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQND 140
K D++ + +++TV EA++ LVEK I+ P+++ + + VG VSD D++ L S +
Sbjct: 481 KRDVYTLPSSSTVAEAMQFLVEKHISAAPLVNAEGQAVGFVSDGDIMRYLSKRSAMVMDP 540
Query: 141 TSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR 200
+ T + ++ R L + G V + + + V + +L + R+L + ++
Sbjct: 541 VVMIMQTVDTDSSNSDFARKLDQLMGMNVTAIGSKGIIGVDIHADLPEVCRVLGDNHLKK 600
Query: 201 LPVVDGYGKLVGLITRGNVVRAALQ--IKRDGERS 233
+PV+D G++VG+I R ++ ++Q + GE++
Sbjct: 601 VPVLDD-GQVVGVINRSDITHYSMQKYLAERGEKA 634
>gi|292654466|ref|YP_003534363.1| SpoIVFB-type metallopeptidase [Haloferax volcanii DS2]
gi|448293531|ref|ZP_21483637.1| SpoIVFB-type metallopeptidase [Haloferax volcanii DS2]
gi|448597630|ref|ZP_21654555.1| SpoIVFB-type metallopeptidase [Haloferax alexandrinus JCM 10717]
gi|291371025|gb|ADE03252.1| SpoIVFB-type metallopeptidase, transmembrane (TBD) [Haloferax
volcanii DS2]
gi|445570585|gb|ELY25145.1| SpoIVFB-type metallopeptidase [Haloferax volcanii DS2]
gi|445739091|gb|ELZ90600.1| SpoIVFB-type metallopeptidase [Haloferax alexandrinus JCM 10717]
Length = 390
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E+L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGRENLDVVDEKTSVAELLERMFVERHTGYPVLRNG-DLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELTTITPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPVVD G+LVGL++R ++V A
Sbjct: 338 QERGVGRLPVVDEAGELVGLVSRSDLVTA 366
>gi|239906791|ref|YP_002953532.1| hypothetical protein DMR_21550 [Desulfovibrio magneticus RS-1]
gi|239796657|dbj|BAH75646.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 152
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D MT EDL A++ ++ A + E RI P+ID VG+V+ DLLA S+
Sbjct: 3 TTRDLMT--EDLIALRHDDSLLSAKRTMEEARIRHLPIIDGSGAFVGLVTHRDLLAA-SV 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
S + D ++ + G +G++M +V + L AA +L
Sbjct: 60 SRLAEIDAQTQEDIYA----------------GIPLGEVMRADVAMVTPDLPLRQAAEVL 103
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
L KY LPVV+G GKLVG++T + +R +L++
Sbjct: 104 LTQKYGCLPVVEG-GKLVGILTASDFIRLSLEL 135
>gi|408371984|ref|ZP_11169737.1| CBS domain-containing protein [Galbibacter sp. ck-I2-15]
gi|407742596|gb|EKF54190.1| CBS domain-containing protein [Galbibacter sp. ck-I2-15]
Length = 153
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 26/152 (17%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT+ +L + ++ E +E LV+ +I+G PV D LVG++S+ D + S S
Sbjct: 23 VSDYMTR--NLVTFRPEQSILEVMELLVKHKISGGPVCDQRGGLVGIISEADCMKQISES 80
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ FN +L K+ V M+ + + N+ DAA
Sbjct: 81 -----------------RYFN--MPILDKS----VEKFMSTNVETIPSDMNIFDAASQFH 117
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
RRLPV+D GKLVG ++R +VV AAL++
Sbjct: 118 NGHRRRLPVLD-QGKLVGQLSRKDVVVAALKL 148
>gi|91773707|ref|YP_566399.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712722|gb|ABE52649.1| Cystathionine beta-synthase domain-containing protein
[Methanococcoides burtonii DSM 6242]
Length = 258
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 26/129 (20%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLL----ALDSISGGNQNDTSLFPNVNSTWKTFNE 156
+++K I FPVI+D KL+G+V++ D+ A I GNQ DT
Sbjct: 152 ILDKDIGRFPVIED-GKLIGIVTEQDIAKSMRAFRDIVSGNQQDT--------------- 195
Query: 157 LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
+ +V D+M V NT + D ++L+ K LPVV+ G +VG ITR
Sbjct: 196 ------RIKNLIVEDIMKRGVKTVQSNTLMSDVTAMMLKEKIGGLPVVNLEGDMVGFITR 249
Query: 217 GNVVRAALQ 225
N++ A Q
Sbjct: 250 RNIISAFAQ 258
>gi|448606526|ref|ZP_21658952.1| SpoIVFB-type metallopeptidase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445738734|gb|ELZ90246.1| SpoIVFB-type metallopeptidase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 390
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E+L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGRENLDVVDEKTSVAELLERMFVERHTGYPVLRNG-DLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELTTITPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPVVD G+LVGL++R ++V A
Sbjct: 338 QERGVGRLPVVDEAGELVGLVSRSDLVTA 366
>gi|223932398|ref|ZP_03624400.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|302023619|ref|ZP_07248830.1| hypothetical protein Ssui0_03021 [Streptococcus suis 05HAS68]
gi|330832631|ref|YP_004401456.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|386583892|ref|YP_006080295.1| putative signal transduction protein [Streptococcus suis D9]
gi|389856795|ref|YP_006359038.1| putative signal transduction protein [Streptococcus suis ST1]
gi|417092660|ref|ZP_11957276.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|223898852|gb|EEF65211.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|329306854|gb|AEB81270.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|353532339|gb|EHC02011.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|353736038|gb|AER17047.1| putative signal transduction protein with CBS domains
[Streptococcus suis D9]
gi|353740513|gb|AER21520.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST1]
Length = 218
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 83/159 (52%), Gaps = 21/159 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V DFMT+K + + TT+ A + + E+ + PVI++D KLVG+V++
Sbjct: 2 SVKDFMTRK--VVYISPDTTIAHAADIMREQDLHRLPVIEND-KLVGLVTE--------- 49
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + S P+ +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 50 --GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD G+L G+IT ++ A L + GE
Sbjct: 102 YKNKVGILPVVDN-GQLYGVITDRDIFAAFLHVSGYGEE 139
>gi|451945157|ref|YP_007465793.1| major facilitator superfamily permease [Corynebacterium
halotolerans YIM 70093 = DSM 44683]
gi|451904544|gb|AGF73431.1| major facilitator superfamily permease [Corynebacterium
halotolerans YIM 70093 = DSM 44683]
Length = 636
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
K D++A+ + TV EAL+ E+ I+G P+ID D L G +SD D+ + +S + + T
Sbjct: 479 KSDVYALSSDQTVLEALQTFAERGISGAPIIDTDGSLAGFLSDGDV--MRYLSAAHPSST 536
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
S++ + +L++ +S G V L T L + +++ DA + + +++
Sbjct: 537 SIY---SYAIGADEDLEQAMSDLAGLNVMKLATHDVLTIDVGSSIADAVAAVSDAHIKKV 593
Query: 202 PVVDGY-GKLVGLITRGNVVRAAL 224
PVV G G++VG+++R + R A+
Sbjct: 594 PVVRGENGQVVGIVSRSAINRLAI 617
>gi|448622473|ref|ZP_21669167.1| SpoIVFB-type metallopeptidase [Haloferax denitrificans ATCC 35960]
gi|445754555|gb|EMA05960.1| SpoIVFB-type metallopeptidase [Haloferax denitrificans ATCC 35960]
Length = 390
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E+L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGRENLDVVDEKTSVAELLERMFVERHTGYPVLRNG-DLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELTTITPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPVVD G+LVGL++R ++V A
Sbjct: 338 QERGVGRLPVVDEAGELVGLVSRSDLVTA 366
>gi|383831533|ref|ZP_09986622.1| CBS-domain-containing membrane protein [Saccharomonospora
xinjiangensis XJ-54]
gi|383464186|gb|EID56276.1| CBS-domain-containing membrane protein [Saccharomonospora
xinjiangensis XJ-54]
Length = 189
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 25/126 (19%)
Query: 96 EALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFN 155
+A+ RL E G PV+D++ ++VG++++ D AL + N T+ P V
Sbjct: 22 DAVVRLTEGGFAGLPVVDEEQQVVGMITESD--ALRAAEQANTTGTATAPRV-------- 71
Query: 156 ELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
D+MT VV N ++ D ARL+L + R LPVV+ G+LVG+++
Sbjct: 72 --------------ADVMTSPVAVVSTNDDVMDIARLMLGDRLRSLPVVEN-GELVGIVS 116
Query: 216 RGNVVR 221
R +V++
Sbjct: 117 RRDVLK 122
>gi|289596982|ref|YP_003483678.1| signal transduction protein with CBS domains [Aciduliprofundum
boonei T469]
gi|289534769|gb|ADD09116.1| putative signal transduction protein with CBS domains
[Aciduliprofundum boonei T469]
Length = 161
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D M K D+ + T+ +A E V+ I+G PV+D KL+G+++ D+L I
Sbjct: 4 IKDIMNK--DVITLSPEMTIKDAYELFVKNHISGAPVVDPHGKLLGILTTKDIL---KII 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV---------VGDLMTPAPLVVHENTN 185
D ++ V T F E+ + K VG++M V+ +T+
Sbjct: 59 KNRMEDIGIY--VFPTPFDFMEVLPIEIPEESKATFESIANTKVGEIMERRVHYVNPDTD 116
Query: 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ +A LL++ RLPVV+ K+VG+ITR +V++A
Sbjct: 117 IYEALELLVKKGISRLPVVNENKKVVGIITRSDVLKA 153
>gi|448475853|ref|ZP_21603208.1| peptidase M50 [Halorubrum aidingense JCM 13560]
gi|445816071|gb|EMA65980.1| peptidase M50 [Halorubrum aidingense JCM 13560]
Length = 393
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVGD MT +E+LH V T+V E ++R+ E+R TG+PV+ + LVG+V+ D
Sbjct: 249 TVGDVMTPREELHTVTEDTSVSELMQRMFEERHTGYPVLHGE-DLVGMVTLEDA------ 301
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ +++R + VG++M + + + + A + +
Sbjct: 302 ------------------RSVRDVER-----DAYRVGEVMADNVVAIGPHVDAMTALQTM 338
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVV+ +L+G+I+R +++ A I+ G
Sbjct: 339 QENGVGRLPVVNESDELIGIISRSDLMTAFNIIQTGG 375
>gi|374703637|ref|ZP_09710507.1| hypothetical protein PseS9_09665 [Pseudomonas sp. S9]
Length = 141
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 28/149 (18%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT L + T + A+ RL+E RI G PV+D +LVG++S+ D L ++S
Sbjct: 7 VRDYMTTH--LVTFRAETDLFTAINRLLEHRIAGAPVVDSQGRLVGLISEGDCLRA-TLS 63
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + + ++ T VGD M+ + T++ + + L
Sbjct: 64 G------AYYESIGGT------------------VGDYMSRNIETITPETSVIEVSERFL 99
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+ K R+PV+ G+LVG I+R +V+RAA
Sbjct: 100 QGKLGRMPVI-ADGRLVGQISRSDVLRAA 127
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
V D MT + T+L A LLE + PVVD G+LVGLI+ G+ +RA L
Sbjct: 7 VRDYMTTHLVTFRAETDLFTAINRLLEHRIAGAPVVDSQGRLVGLISEGDCLRATL 62
>gi|448437421|ref|ZP_21587444.1| CBS domain containing membrane protein [Halorubrum tebenquichense
DSM 14210]
gi|445681148|gb|ELZ33587.1| CBS domain containing membrane protein [Halorubrum tebenquichense
DSM 14210]
Length = 166
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T T D M + D+ V V E +R +GFPV+DDD ++VGV+++ DL+ L
Sbjct: 2 TLTARDLM--ESDVKTVSPDDDVAEVFKRFARYEFSGFPVVDDDERVVGVITESDLVDL- 58
Query: 132 SISGGNQNDTSLFP------------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV 179
+++T P V W + L + + + + ++M+
Sbjct: 59 ---FEPEDETLWIPIGLPPFVDTLSYQVKRPWADLD-LGVDMVRNADRPISEVMSADVAT 114
Query: 180 VHENTNLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
V + +++ LL+ + R+PVVD G++VG+I R +V+RA
Sbjct: 115 VTPDASVDAVLDLLVGDDPDINRVPVVDDEGRIVGIIARQDVIRA 159
>gi|354610020|ref|ZP_09027976.1| peptidase M50 [Halobacterium sp. DL1]
gi|353194840|gb|EHB60342.1| peptidase M50 [Halobacterium sp. DL1]
Length = 389
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V D MT ED+H V+ T +V E +ER+ E+R TG+PV D +VG+V+ D
Sbjct: 250 SVEDVMTPAEDVHTVEATASVAELMERMFEQRHTGYPVTRDG-DVVGMVTLDDA------ 302
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
++ N+++R + V D+MT + +N DA L
Sbjct: 303 ------------------RSVNQVER-----DAIRVEDVMTREVHSIPRFSNAMDAIDAL 339
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RL VVD G++ GLI+R +++ A I+ G
Sbjct: 340 QEHGIGRLVVVDADGEMAGLISRTDLMTAFDIIQSTG 376
>gi|92117441|ref|YP_577170.1| hypothetical protein Nham_1902 [Nitrobacter hamburgensis X14]
gi|91800335|gb|ABE62710.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
X14]
Length = 231
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 13/134 (9%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
TV + + L+EKRI+ PV+D+ K++G+V++ DL+ G + S W
Sbjct: 19 TVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLM--HRAEAGTERPYSW-------WV 69
Query: 153 TFNELQRLLS----KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG 208
F ++ K++ + D+MT + T L + A L E + +R+P+V+ G
Sbjct: 70 HFLAGDATMAADYVKSHATRIEDVMTTDVVTATPETLLHEIAMLFEERQIKRVPIVNNDG 129
Query: 209 KLVGLITRGNVVRA 222
LVG+++R N+++A
Sbjct: 130 DLVGIVSRANLIQA 143
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+M + V + + D A++LLE + +PVVD GK++G++T +++ A
Sbjct: 5 DVMVSPVITVGKIATVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLMHRA 57
>gi|296133812|ref|YP_003641059.1| putative signal transduction protein with CBS domains [Thermincola
potens JR]
gi|296032390|gb|ADG83158.1| putative signal transduction protein with CBS domains [Thermincola
potens JR]
Length = 147
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 79 MTKKEDLHA----VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
M KE +H K ++ E + ++ ++ P++DD+ K++GVV++ D++ + S
Sbjct: 1 MLAKEVMHTNVLTGKPENSIQELIRMMLNFNVSMLPIVDDNLKVLGVVTEGDII-YRAYS 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G D + + E+ + ++K +G ++MT E+T + + AR+++
Sbjct: 60 DGEPVDVGV-----AFLGKLREMIKSINKRSGTTAREVMTEELFTASEDTPISEIARMMV 114
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
K + +P++ GKLVGL++R +++R ++ K
Sbjct: 115 REKIKNVPIL-ADGKLVGLVSRRDIMRLVMEGK 146
>gi|383764076|ref|YP_005443058.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384344|dbj|BAM01161.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 429
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 91/177 (51%), Gaps = 15/177 (8%)
Query: 48 VSREVKAFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRIT 107
+ RE H +G S P N V M + +++ +V T +V E ++ L+++ +
Sbjct: 97 IVREPVTVVHYSMG--RSKDPLN--QPVSYIMRELDEVASVTTDASVAEVVKLLLDRGVR 152
Query: 108 GFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLS--KTN 165
PV+D++ +LVG+++D DLL G +L + +++ LL+ + +
Sbjct: 153 SLPVVDEERRLVGIITDGDLLR----RAGLTARIALHKEMPD-----DQIHALLTTLRRS 203
Query: 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
G++MT + V + + AA +++ +RLPVV+ G+L+G+++R ++ R+
Sbjct: 204 PLTAGEMMTAPVISVRTDETVRTAAARMVKHNLKRLPVVNEEGRLMGMVSRIDIFRS 260
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 8/169 (4%)
Query: 57 HNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDW 116
H+ T+ PR G ++ + M D+ V T++E + L R V+D +
Sbjct: 264 HSDRKATDIEEPRPG-RSITELMYT--DVPTVGPDATLEEIVRALEASRRRRVVVVDSER 320
Query: 117 KLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPA 176
++G+++D DLL + L + + ++L + G+ DLM+
Sbjct: 321 HVLGMITDGDLLR----RSQQRQHPGLLERLRRLVVGEPAIDQVLP-SAGERAADLMSAP 375
Query: 177 PLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + + +L +A RL+ +RLPVVD G+L+GL+ R +V+R ++
Sbjct: 376 VITIRPDASLGEALRLMTTHAVKRLPVVDAEGRLLGLLGRASVLRGLME 424
>gi|297564600|ref|YP_003683572.1| hypothetical protein [Meiothermus silvanus DSM 9946]
gi|296849049|gb|ADH62064.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
Length = 181
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Query: 86 HAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL-DSISGGNQNDTSLF 144
++V+ T+ A +R++E R+ G PV+++ KLVG++ DLL +++ LF
Sbjct: 30 YSVRLDETLLVAAQRMLEHRLGGLPVVNEAGKLVGLIEVDDLLPRPENVPFSEVEALRLF 89
Query: 145 PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA-ARLLLETKYRRLPV 203
W ++ + + K V M VV LE A R++ + +YRR+ V
Sbjct: 90 ----DEWVDPGSVESVYRQYQSKPVAAAMRTELAVVSPEDPLETALVRMMQDRQYRRVLV 145
Query: 204 VDGYGKLVGLITRGNVVR 221
VD G+LVG +TR + +R
Sbjct: 146 VDEQGQLVGTLTRSDFLR 163
>gi|373109163|ref|ZP_09523442.1| hypothetical protein HMPREF9712_01035 [Myroides odoratimimus CCUG
10230]
gi|423129169|ref|ZP_17116844.1| hypothetical protein HMPREF9714_00244 [Myroides odoratimimus CCUG
12901]
gi|423132828|ref|ZP_17120475.1| hypothetical protein HMPREF9715_00250 [Myroides odoratimimus CIP
101113]
gi|371645161|gb|EHO10687.1| hypothetical protein HMPREF9712_01035 [Myroides odoratimimus CCUG
10230]
gi|371649367|gb|EHO14847.1| hypothetical protein HMPREF9714_00244 [Myroides odoratimimus CCUG
12901]
gi|371649585|gb|EHO15062.1| hypothetical protein HMPREF9715_00250 [Myroides odoratimimus CIP
101113]
Length = 138
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 21/146 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V M+K L AV T + E + LVE I PVI+ + +VG++S D+L +
Sbjct: 7 VSQIMSKA--LIAVPTNKKLSEVNQLLVEYNIRHIPVIEAE-NVVGIISSNDILKIGY-- 61
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G N D S + +K + D+MT P+VV ++TN++D A +
Sbjct: 62 GANDLDQSALDAIYDAYK----------------LEDVMTKNPIVVMDDTNIKDVAEIFS 105
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVV 220
+ ++ LPVVD L G++T +++
Sbjct: 106 KQQFHSLPVVDKDNVLQGIVTTTDMI 131
>gi|448534833|ref|ZP_21621930.1| CBS domain containing membrane protein [Halorubrum hochstenium ATCC
700873]
gi|445703984|gb|ELZ55904.1| CBS domain containing membrane protein [Halorubrum hochstenium ATCC
700873]
Length = 166
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T T D M + D+ V V E +R +GFPV+DDD ++VGV+++ DL+ L
Sbjct: 2 TLTARDLM--ESDVKTVSPDDDVAEVFKRFARYEFSGFPVVDDDERVVGVITESDLVDL- 58
Query: 132 SISGGNQNDTSLFP------------NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV 179
+++T P V W + L + + + + ++M+
Sbjct: 59 ---FEPEDETLWIPIGLPPFVDTLSYQVKRPWADLD-LGVDMVRNADRPISEVMSADVAT 114
Query: 180 VHENTNLEDAARLLL--ETKYRRLPVVDGYGKLVGLITRGNVVRA 222
V + +++ LL+ + R+PVVD G++VG+I R +V+RA
Sbjct: 115 VTPDASVDAVLDLLVGDDPDINRVPVVDDEGRIVGIIARQDVIRA 159
>gi|423074979|ref|ZP_17063698.1| CBS domain protein [Desulfitobacterium hafniense DP7]
gi|361853928|gb|EHL06043.1| CBS domain protein [Desulfitobacterium hafniense DP7]
Length = 160
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T + E + L + I+G PVID L+G+VS+ DLL + + + F +
Sbjct: 29 TEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLHKE--THPRVPEAVGFLGALIYY 86
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ + + L K ++MT + + ++ ++E+AA L++ +RLP+++ GK+V
Sbjct: 87 RGVKQYESDLKKLVALKASEIMTHEVITLDKDASIEEAASLMINHNVKRLPIMEN-GKMV 145
Query: 212 GLITRGNVVRAALQ 225
G+ITR +V++ ++
Sbjct: 146 GIITRKDVIKVLIE 159
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
V D+M + + NT + + A+LL + +PV+D +G L+G+++ G+++
Sbjct: 14 VQDIMQTNVITISPNTEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLH 66
>gi|268323709|emb|CBH37297.1| conserved hypothetical protein, CBS domain containing [uncultured
archaeon]
Length = 290
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 100 RLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDSISGG-NQNDTSLFPNVNS-TWKTFNE 156
R++E R+ PV++ + +LVG+++D DL+ + I Q+D SL + ++ TW+ +
Sbjct: 153 RIMELARVKAAPVLNLELELVGLITDLDLINVVVIEDTTEQSDLSLGSDEDAWTWEGMRD 212
Query: 157 LQRLLS-----KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
RL K K+V D++ + V N+ + D A+ + E K+ +LPV+ GKL
Sbjct: 213 TMRLYYDVSKIKLPDKLVKDVLVKDVITVTRNSEVSDCAKKMSENKFDQLPVISARGKLT 272
Query: 212 GLITRGNVVRAALQ 225
G++ +++R +
Sbjct: 273 GMLIDRDLLRVLFE 286
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 158 QRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRG 217
Q +L + + LM P+++ + +AA ++L RRLPVV G KLVGLIT
Sbjct: 58 QDVLRNRDENQIALLMHRNPIIISPEATIAEAAEIILSHGIRRLPVVVGE-KLVGLITIA 116
Query: 218 NVVRAALQIKRDGERS 233
+++R KRD E S
Sbjct: 117 DLIREIA--KRDYEES 130
>gi|421601459|ref|ZP_16044253.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
gi|404266431|gb|EJZ31317.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
Length = 242
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V T++ EA ++++ ++G V+D+ +LVG+VS+ D + I G +
Sbjct: 13 SVTPDTSIVEAANIMLKRHVSGLTVVDETGRLVGIVSEGDFIRRSEIGTGRK-------- 64
Query: 147 VNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
W F + +G+ V ++MT + + + E+T L + L+ +RLP
Sbjct: 65 -RGRWLRFILGPGKSASDFVHEHGRRVSEVMTESVVTITEDTALAEIVDLMERNNVKRLP 123
Query: 203 VVDGYGKLVGLITRGNVVRAALQIKRD 229
VV G K+VG+++R N+++A + R+
Sbjct: 124 VVRG-DKVVGIVSRANLLQAVAGLARE 149
>gi|224009930|ref|XP_002293923.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
CCMP1335]
gi|220970595|gb|EED88932.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
CCMP1335]
Length = 132
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT+ + T+VDEA+ L+ ++G PV++ +LVG VS +D L
Sbjct: 3 VSDLMTQNP--FTLSPQTSVDEAIATLLAAGVSGAPVVEQ-LRLVGFVSSFDFL------ 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQ--RLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
P S T E++ + G+ V D+MT P+ V+ N ++ AA +
Sbjct: 54 ----------PREESGLVTLGEMEDSETARRILGQSVKDIMTRNPVSVNTNDLMKTAAEI 103
Query: 193 LLETKYRRLPVVDGY-GKLVGLITRGNVV 220
+ + + LPVVD + G LVG+I+ +V+
Sbjct: 104 MAKHRLHVLPVVDVHRGNLVGVISAKDVM 132
>gi|386844835|ref|YP_006249893.1| hypothetical protein SHJG_8756 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105136|gb|AEY94020.1| hypothetical protein SHJG_8756 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798125|gb|AGF68174.1| hypothetical protein SHJGH_8512 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 214
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 103 EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL-- 160
E+ ++ PV+ + +++GVVS+ DLL + G F +QR
Sbjct: 23 ERCVSAVPVVSGEGRVIGVVSEADLLPKEEFRG-------------RELTRFERIQRRSD 69
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
L+K G ++M+ + V + L AAR + +RLPVVD +L G+++RG+++
Sbjct: 70 LTKAEGMTAEEVMSTPAVTVRPDDTLAQAARRMAVHHVKRLPVVDDADRLRGVVSRGDLL 129
Query: 221 RAALQIKRDGE 231
+ L+ D E
Sbjct: 130 KVFLRPDEDIE 140
>gi|365899445|ref|ZP_09437351.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419812|emb|CCE09893.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 249
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T + EA + ++ I PV+D KLVG+V+D D + I + L V
Sbjct: 14 VTPGTPIVEAAKVMLRNHIGALPVVDTGGKLVGIVTDGDFIRRAEIGTARKRGRWLGLLV 73
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ +++G+ V ++MTP P+ V EN L + L+ +RLPVV G
Sbjct: 74 GR-----GRINADFIRSHGRAVCEIMTPDPVTVSENATLPEIVGLMERKHVKRLPVVSG- 127
Query: 208 GKLVGLITRGNVVRA 222
+LVG+++ + V+A
Sbjct: 128 DRLVGIVSYRDFVQA 142
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 172 LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+M+ + + V T + +AA+++L LPVVD GKLVG++T G+ +R A
Sbjct: 6 IMSRSVITVTPGTPIVEAAKVMLRNHIGALPVVDTGGKLVGIVTDGDFIRRA 57
>gi|153004477|ref|YP_001378802.1| hypothetical protein Anae109_1614 [Anaeromyxobacter sp. Fw109-5]
gi|152028050|gb|ABS25818.1| CBS domain containing protein [Anaeromyxobacter sp. Fw109-5]
Length = 431
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 10/153 (6%)
Query: 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
T D M++ + + + + E +E L+ K V++D+ +G+V+ DL
Sbjct: 119 AAMTAADVMSRG--VLSTREDAPIREVVEALLGKPYRAVLVVEDEVP-IGIVTSSDL--- 172
Query: 131 DSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ GG L +++ + L+ LS++ +V GD+MT P+ V L + A
Sbjct: 173 -ARKGGLGMRLELVQSLDR--PALDGLRERLSRST-QVAGDVMTRPPVTVEAAAPLPEVA 228
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+ + +RLPVV+ +GKLVG+++R +++RAA
Sbjct: 229 ERMARLRLKRLPVVNDHGKLVGIVSRVDLLRAA 261
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS---GGNQ 138
+ D V+ T + E + ++ R+ V+D + ++VG+V+D +LL + + G +
Sbjct: 288 RRDFPLVRPDTALPEVFQAVIATRLNRALVVDAEHRVVGLVTDAELLERITPALRPGALR 347
Query: 139 NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKY 198
+ S P +S + + ++T DLMT +V E+T + +A L+LE +
Sbjct: 348 SLMSRLPFGHSDPEESATERHARART----AADLMTREVVVAREDTPVSEAIGLVLEGNH 403
Query: 199 RRLPVVDGYGKLVGLITRGNVVRA 222
+ L V D G+L+G + R +++ A
Sbjct: 404 KVLAVTDASGRLLGAVDRADLLHA 427
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T GD MT+ V+ + E ER+ R+ PV++D KLVG+VS DLL
Sbjct: 204 TQVAGDVMTRPPV--TVEAAAPLPEVAERMARLRLKRLPVVNDHGKLVGIVSRVDLL--R 259
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ +GG + + T L R++ + PLV +T L + +
Sbjct: 260 AAAGGFEGAPPAHRELGLARDT--PLSRVMRRDF-----------PLV-RPDTALPEVFQ 305
Query: 192 LLLETKYRRLPVVDGYGKLVGLIT 215
++ T+ R VVD ++VGL+T
Sbjct: 306 AVIATRLNRALVVDAEHRVVGLVT 329
>gi|393757933|ref|ZP_10346757.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393165625|gb|EJC65674.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 161
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T V E L+E RI G PV D + +L+G+V++ DL+ D L P S W
Sbjct: 18 TAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV-------HRAADERLEPR-ESVW 69
Query: 152 K------TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
K F KT G+ +MT L V ++ AARLL + + LPV++
Sbjct: 70 KENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSLPVIE 129
Query: 206 GYGKLVGLITRGNVVR 221
+L+G+I+R ++++
Sbjct: 130 NE-RLIGIISRFDLIK 144
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
V DLMTP P+ + T + + AR+L+E + +PV D G+L+G++T G++V A
Sbjct: 3 VRDLMTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLVHRA 57
>gi|374610540|ref|ZP_09683331.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tusciae
JS617]
gi|373550415|gb|EHP77057.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tusciae
JS617]
Length = 513
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 87/218 (39%), Gaps = 64/218 (29%)
Query: 29 LPITVATPSHLSKRLRF-----------FTVSREVKAFAH-NGVGITNSVPP-------- 68
+P T T S L+KR+R T SR A A G+G+ + P
Sbjct: 44 VPATADTSSQLTKRIRLRVPLVSSAMDTVTESRMAIAMARAGGMGVLHRNLPVAEQAGQV 103
Query: 69 ----RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124
R+ V D +T D T VD R RI+G PV+D LVG++++
Sbjct: 104 ETVKRSEAGMVTDPVTCSPD----NTLAEVDAMCARF---RISGLPVVDSLGSLVGIITN 156
Query: 125 YDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHEN 183
D+ F Q K V ++MT APL+ E
Sbjct: 157 RDM-------------------------RFEVDQS-------KPVSEVMTKAPLITAQEG 184
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ E A LL K +LP+VDG+GKL GLIT + V+
Sbjct: 185 VSAEAALGLLRRHKIEKLPIVDGHGKLTGLITVKDFVK 222
>gi|345888479|ref|ZP_08839562.1| hypothetical protein HMPREF0178_02336 [Bilophila sp. 4_1_30]
gi|345040648|gb|EGW44885.1| hypothetical protein HMPREF0178_02336 [Bilophila sp. 4_1_30]
Length = 225
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 22/148 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ ++MTK D+ V T++ +A + + + I PV+D ++VG+VSD D+ A
Sbjct: 3 IREWMTK--DVITVTPDTSMLKASKLMKDHNIRRLPVLDGK-RVVGIVSDRDIRAAS--- 56
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ V D+MT P+ V+ +T+ DAA LL+
Sbjct: 57 ----------PSKATTLD-MHELYYLLSEVK---VKDIMTSDPVTVY-DTDAVDAAALLM 101
Query: 195 ETK-YRRLPVVDGYGKLVGLITRGNVVR 221
E K LPVVDG G+LVG+IT ++ R
Sbjct: 102 ENKGIGGLPVVDGSGELVGIITDHDIFR 129
>gi|315231806|ref|YP_004072242.1| inosine-5'-monophosphate dehydrogenase [Thermococcus barophilus MP]
gi|315184834|gb|ADT85019.1| inosine-5'-monophosphate dehydrogenase [Thermococcus barophilus MP]
Length = 485
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 35/138 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ + T+D AL + + I G PVI D K+VG+VS D+ A
Sbjct: 101 EDVITISPDETLDYALFLMEKHDIDGLPVIKD-GKVVGIVSKKDIAA------------- 146
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
G+ V D+MT + V E+ ++E+A +++++ + RLP
Sbjct: 147 ---------------------KEGQKVKDIMTKEVITVEEDISVEEAMKIMVKNRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVV 220
VV+ GKL+GLIT ++V
Sbjct: 186 VVNKKGKLIGLITMSDLV 203
>gi|411006726|ref|ZP_11383055.1| putative CBS domain-containing protein [Streptomyces globisporus
C-1027]
Length = 216
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
YTV D MT+K + AV T + + + + ++ PV++ + +VGVVS+ DLL +
Sbjct: 6 YTVADVMTRK--VIAVARTASFKDIVTAMSRWSVSALPVVEGEGHVVGVVSEADLLPKEE 63
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
++ L ++ T +K DLMT L + + L AARL
Sbjct: 64 F---HERSPGLLEQMHRLDAT--------AKAGSLTAEDLMTRPALTIGPDATLPQAARL 112
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ +RLPVV+G L G+++R ++++ L+
Sbjct: 113 MATRGVKRLPVVEG-DVLRGIVSRSDLLKVFLR 144
>gi|410455934|ref|ZP_11309805.1| hypothetical protein BABA_18866 [Bacillus bataviensis LMG 21833]
gi|409928582|gb|EKN65684.1| hypothetical protein BABA_18866 [Bacillus bataviensis LMG 21833]
Length = 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V +FM K D+ +V ++ + + VEK+I G P++ D L+G+V+D D+L +I
Sbjct: 3 VREFMVK--DVISVSPERSIKDVMALFVEKKIGGVPILKKDGTLLGMVTDGDILR--AIK 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
++ F + K + RL N ++ T + V ++ LL
Sbjct: 59 PVDRRIPDYFSFITYVAKEDMD-NRLKELANTEISKIAKTHGIVTVFPEDDMRTVVELLS 117
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ +++LPVVD +VG+I+RG+V+R Q
Sbjct: 118 KHHFKKLPVVDEQNHVVGVISRGDVIRNIQQ 148
>gi|89897037|ref|YP_520524.1| hypothetical protein DSY4291 [Desulfitobacterium hafniense Y51]
gi|89336485|dbj|BAE86080.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 174
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T + E + L + I+G PVID L+G+VS+ DLL + + + F +
Sbjct: 43 TEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLHKE--THPRVPEAVGFLGALIYY 100
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ + + L K ++MT + + ++ ++E+AA L++ +RLP+++ GK+V
Sbjct: 101 RGVKQYESDLKKLVALKASEIMTHEVITLDKDASIEEAASLMINHNVKRLPIMEN-GKMV 159
Query: 212 GLITRGNVVRAALQ 225
G+ITR +V++ ++
Sbjct: 160 GIITRKDVIKVLIE 173
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 147 VNSTWKTFNELQRLLSKTNGK-----VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
++ +W T + ++ + + N K V D+M + + NT + + A+LL + +
Sbjct: 1 MSKSWYTSTKFRQNMFQGNHKGVLAMKVQDIMQTNVITISPNTEIREIAKLLCDHHISGV 60
Query: 202 PVVDGYGKLVGLITRGNVVR 221
PV+D +G L+G+++ G+++
Sbjct: 61 PVIDLFGNLIGIVSEGDLLH 80
>gi|322690887|ref|YP_004220457.1| transport protein [Bifidobacterium longum subsp. longum JCM 1217]
gi|320455743|dbj|BAJ66365.1| putative transport protein [Bifidobacterium longum subsp. longum
JCM 1217]
Length = 683
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ + +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGNGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|298674758|ref|YP_003726508.1| hypothetical protein Metev_0814 [Methanohalobium evestigatum
Z-7303]
gi|298287746|gb|ADI73712.1| CBS domain containing membrane protein [Methanohalobium evestigatum
Z-7303]
Length = 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 27/154 (17%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ K++ ++ + L + I+G PV+DD +VGV+S+ DLL I
Sbjct: 10 DVIYSKSSDSIRSTAQILKKNGISGVPVVDDKNNIVGVISEEDLLRFLEI---------- 59
Query: 144 FPNVNSTW---------------KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
P+ W ++ E + +LS K V +M L + +E
Sbjct: 60 -PDHRGLWLPSPFEVIEIPIREFVSWEETKHMLSDFGDKKVQQVMKTDVLTITPEDTIEY 118
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A++L+ + K RLPV++ GKL+G++TRG+++
Sbjct: 119 ASQLMTKHKINRLPVIED-GKLIGIVTRGDIIEG 151
>gi|424875673|ref|ZP_18299332.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393163276|gb|EJC63329.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 226
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 79/146 (54%), Gaps = 14/146 (9%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ++ ++ + A+ +++ ++G PVIDD+ ++ G++++ DLL
Sbjct: 5 DIMTT--NVVSIGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGMLTEGDLLL------- 55
Query: 137 NQNDTSLFPNVNSTWKTFNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ + P + +E L+R +S +NG V D+M+ +V ++ + D A L
Sbjct: 56 -RKEIRFAPRAARAPEIISEIDLERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQ 113
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVV 220
+ +RLP+V+ G+LVG+++R +++
Sbjct: 114 AHRIKRLPIVED-GRLVGIVSRRDIL 138
>gi|448582649|ref|ZP_21646153.1| metalloprotease [Haloferax gibbonsii ATCC 33959]
gi|445732297|gb|ELZ83880.1| metalloprotease [Haloferax gibbonsii ATCC 33959]
Length = 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E+L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGRENLDVVDERTSVAELLERMFVERHTGYPVLRNG-NLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELATISPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G LVGL++R ++V A I+ G
Sbjct: 338 QERGVGRLPVVDETGDLVGLVSRSDLVTAFNIIRSRG 374
>gi|340795243|ref|YP_004760706.1| inosine-5-monophosphate dehydrogenase [Corynebacterium variabile
DSM 44702]
gi|340535153|gb|AEK37633.1| inosine-5-monophosphate dehydrogenase [Corynebacterium variabile
DSM 44702]
Length = 684
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 33/112 (29%)
Query: 105 RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKT 164
RI+G PV+D + LVG+ ++ D+ R
Sbjct: 305 RISGLPVVDAEGMLVGICTNRDM-------------------------------RFEEDF 333
Query: 165 NGKVVGDLMTPAPLVVHENTNLEDAA-RLLLETKYRRLPVVDGYGKLVGLIT 215
+ KV D+MTP PL+V E DAA RLL + K +LP+V+G GKL GLIT
Sbjct: 334 SAKVA-DVMTPMPLIVAEEGVSADAALRLLSQHKVEKLPIVNGAGKLTGLIT 384
>gi|332686500|ref|YP_004456274.1| hypothetical protein MPTP_1007 [Melissococcus plutonius ATCC 35311]
gi|332370509|dbj|BAK21465.1| CBS domain containing protein [Melissococcus plutonius ATCC 35311]
Length = 167
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 24/158 (15%)
Query: 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
G F+ E++ V ++ ++ A+ L + + + PV+D + + VG++S D++
Sbjct: 15 GSFLIPAENVANVMSSHPLNHAVLVLSKVKYSKIPVLDKNDQFVGLISLADIMG------ 68
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
K F+ L N V D+M V+HE+ LED L++
Sbjct: 69 ----------------KMFSITSIDLKNLNKYTVSDVMEREVTVIHEDWELEDVLHFLVD 112
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERS 233
T + LPVVD Y G+ITR +++A + + E+S
Sbjct: 113 TSF--LPVVDKYQCFKGIITRKEILKAVNHLAHELEKS 148
>gi|435852510|ref|YP_007314096.1| CBS-domain-containing membrane protein [Methanomethylovorans
hollandica DSM 15978]
gi|433663140|gb|AGB50566.1| CBS-domain-containing membrane protein [Methanomethylovorans
hollandica DSM 15978]
Length = 258
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 26/129 (20%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLL----ALDSISGGNQNDTSLFPNVNSTWKTFNE 156
+++K + P+I+D KLVG+V++ D++ A I GNQ +
Sbjct: 152 MLDKNVGRIPIIED-GKLVGIVTEKDVVKAMRAFRDIVSGNQQE---------------- 194
Query: 157 LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
++ +V D+M + V+ NT L D A+++LE LPV++ G+ VGLITR
Sbjct: 195 -----ARIKNLIVADIMKRSVKTVNTNTPLSDVAKMMLEENIGGLPVMNLEGEFVGLITR 249
Query: 217 GNVVRAALQ 225
N+V + Q
Sbjct: 250 RNLVHSMAQ 258
>gi|419849921|ref|ZP_14372942.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 35B]
gi|419853424|ref|ZP_14376246.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 2-2B]
gi|386407953|gb|EIJ22897.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 2-2B]
gi|386410650|gb|EIJ25427.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 35B]
Length = 683
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ + +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGNGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVDG G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|60686976|gb|AAX35684.1| CBS domain-like protein [Acidithiobacillus caldus]
Length = 158
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T V E L+E RI G PV D + +L+G+V++ DL+ D L P S W
Sbjct: 18 TAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV-------HRAADERLEPR-ESVW 69
Query: 152 K------TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVD 205
K F KT G+ +MT L V ++ AARLL + + LPV++
Sbjct: 70 KENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSLPVIE 129
Query: 206 GYGKLVGLITRGNVVR 221
+L+G+I+R ++++
Sbjct: 130 NE-RLIGIISRFDLIK 144
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
V DLMTP P+ + T + + AR+L+E + +PV D G+L+G++T G++V A
Sbjct: 3 VRDLMTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLVHRA 57
>gi|219667093|ref|YP_002457528.1| signal transduction protein with CBS domains [Desulfitobacterium
hafniense DCB-2]
gi|219537353|gb|ACL19092.1| putative signal transduction protein with CBS domains
[Desulfitobacterium hafniense DCB-2]
Length = 149
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T + E + L + I+G PVID L+G+VS+ DLL + + + F +
Sbjct: 18 TEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLHKE--THPRVPEAVGFLGALIYY 75
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ + + L K ++MT + + ++ +E+AA L++ +RLP+++ GK+V
Sbjct: 76 RGVKQYESDLKKLVALKASEIMTHEVITLEKDAAIEEAASLMINHNVKRLPIMEN-GKMV 134
Query: 212 GLITRGNVVRAALQ 225
G+ITR +V++ ++
Sbjct: 135 GIITRKDVIKVLIE 148
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
V D+M + + NT + + A+LL + +PV+D +G L+G+++ G+++
Sbjct: 3 VQDIMQTNVITISPNTEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLH 55
>gi|296119415|ref|ZP_06837974.1| drug resistance transporter, EmrB/QacA family [Corynebacterium
ammoniagenes DSM 20306]
gi|295967587|gb|EFG80853.1| drug resistance transporter, EmrB/QacA family [Corynebacterium
ammoniagenes DSM 20306]
Length = 623
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 5/151 (3%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
K +++++ +TV EAL R I+G P++D + +LVG +SD D+ L +S + +
Sbjct: 472 KSEVYSINADSTVLEALYRFTSLGISGAPIVDHNNQLVGFISDGDI--LRYLSAAHPSSV 529
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
+ + + E + L N V L T + + ++ DA L + +++
Sbjct: 530 NFYSFAVGEKQDLEEAMQELGSLN---VMSLATKQVISLPSTASVADAVAALSDASLKKV 586
Query: 202 PVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
PV++ G +VG+++R + R A+ + E
Sbjct: 587 PVLNPAGAMVGIVSRSAINRLAIASYLEAEH 617
>gi|386002319|ref|YP_005920618.1| Putative signal transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
gi|357210375|gb|AET64995.1| Putative signal transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
Length = 161
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
A++ T V +A+ L I+G PV++ D +L GVVS+ DLL + S+ + P+
Sbjct: 13 AIQATEAVSDAVRLLRTNEISGMPVLEGD-RLAGVVSESDLLRMLSV---EREGGLWLPS 68
Query: 147 VNSTWKT-------FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
+ + +LQ + V ++MT V ++E AA +++ +
Sbjct: 69 PLEVLEVPIRDLIRWEKLQAGAEEAGMTRVSEVMTKKVFTVSPEDSIERAASMMVRHRIN 128
Query: 200 RLPVVDGYGKLVGLITRGNVV 220
RLPV++ GKLVG++TRG+++
Sbjct: 129 RLPVLE-EGKLVGIVTRGDII 148
>gi|289524464|ref|ZP_06441318.1| inosine-5'-monophosphate dehydrogenase, partial [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289502296|gb|EFD23460.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 305
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 33/118 (27%)
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN 165
I+G P++D + KLVG++++ DL R ++ +
Sbjct: 5 ISGVPIVDAEMKLVGIITNRDL-------------------------------RFITDYD 33
Query: 166 GKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ + D+MT L+V H T LEDA +L++ K +LP+VDG G L GLIT ++++A
Sbjct: 34 -QSIKDVMTKENLIVSHIGTTLEDAKAILMKHKVEKLPIVDGEGHLKGLITIKDIIKA 90
>gi|260584956|ref|ZP_05852700.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
gi|260157386|gb|EEW92458.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
Length = 213
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 83/152 (54%), Gaps = 20/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M+ +L V+ TTTV +AL+ + E + PV++ D KLVG+++ +L+A
Sbjct: 3 VKDYMST--NLITVEPTTTVMKALDLMKEHDVHRLPVVEGD-KLVGLLT-AELVA----- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
QN S+ +T + +EL LL+KT K D+M + V LE+AA ++
Sbjct: 54 ---QNSPSM-----ATSLSVHELNYLLNKTTAK---DIMLKQVITVKPTAVLEEAASIMR 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ LPV++ G LVG+IT +++ A + I
Sbjct: 103 QQGIGVLPVLESRGNLVGIITDKDIMDAFIDI 134
>gi|424828149|ref|ZP_18252890.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
gi|365979632|gb|EHN15685.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
Length = 138
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 34/157 (21%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT +++ V +V++A + E + P+ +++ K+VGV++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAGLMSEYNVGSLPICENN-KVVGVITDRDI-ALRSVA 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N+ VGD+MT P+V +++ ++ DAAR++
Sbjct: 59 KREDNNIK--------------------------VGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
E + RRLPV D +VG+++ G++ A++ K + E
Sbjct: 93 ERQIRRLPVEDNQN-IVGIVSLGDI---AIEPKHENE 125
>gi|297568231|ref|YP_003689575.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924146|gb|ADH84956.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 228
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 22/160 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+M K ++ V T++ A + E I PV+ KL+G+V+D D+
Sbjct: 3 IEDWMAK--NVLTVDENTSLMRATRIMKENNIRRLPVVSH-GKLIGIVTDRDV------- 52
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
D S P+ +T +EL LLS+ V D+MT +PL + +LE AA ++L
Sbjct: 53 ----KDAS--PSKTATLD-IHELYYLLSEMK---VKDVMTASPLTLKGKDSLELAAVIML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK--RDGER 232
E K LPVVD G+L GL++ +++RA ++ +DG R
Sbjct: 103 EDKISGLPVVDESGRLTGLLSETDLLRAFVRSTGIKDGSR 142
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D M L V ENT+L A R++ E RRLPVV +GKL+G++T +V A+
Sbjct: 2 LIEDWMAKNVLTVDENTSLMRATRIMKENNIRRLPVV-SHGKLIGIVTDRDVKDAS 56
>gi|219847332|ref|YP_002461765.1| putative signal transduction protein with CBS domains [Chloroflexus
aggregans DSM 9485]
gi|219541591|gb|ACL23329.1| putative signal transduction protein with CBS domains [Chloroflexus
aggregans DSM 9485]
Length = 149
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 24/152 (15%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V ++MT E+ V + A ER+ + + PV+D LVG+++ D+
Sbjct: 4 TERVAEWMT--ENPVCVPPDFSALAAYERMRARGVRRMPVVDKQGNLVGIITRSDI---- 57
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN--GKVVGDLMTPAPLVVHENTNLEDA 189
P +E +R L++ N G+ V +LMTP PL + + ++ A
Sbjct: 58 -------EQAMSHPR--------DEEERRLARFNLAGQTVAELMTPNPLTIASSDSIGKA 102
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
A +++ + LPVVD G+LVG+IT ++ R
Sbjct: 103 AAMMVRARVSGLPVVD-EGRLVGIITESDIFR 133
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+SKT + V + MT P+ V + + A + RR+PVVD G LVG+ITR ++
Sbjct: 1 MSKT--ERVAEWMTENPVCVPPDFSALAAYERMRARGVRRMPVVDKQGNLVGIITRSDIE 58
Query: 221 RAALQIKRDGER 232
+A + + ER
Sbjct: 59 QAMSHPRDEEER 70
>gi|392414996|ref|YP_006451601.1| inosine-5''-monophosphate dehydrogenase [Mycobacterium chubuense
NBB4]
gi|390614772|gb|AFM15922.1| inosine-5''-monophosphate dehydrogenase [Mycobacterium chubuense
NBB4]
Length = 517
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 36/133 (27%)
Query: 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
T VD R RI+G PV+DD LVG++++ D+
Sbjct: 125 TLAEVDAMCARF---RISGLPVVDDTGSLVGIITNRDM---------------------- 159
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARLLLETKYRRLPVVDGYG 208
F Q K V ++MT APL+ E + E A LL K +LP+VDG+G
Sbjct: 160 ---RFEVDQS-------KPVSEVMTKAPLITAQEGVSAEAALGLLRRNKIEKLPIVDGHG 209
Query: 209 KLVGLITRGNVVR 221
KL GLIT + V+
Sbjct: 210 KLTGLITVKDFVK 222
>gi|407474893|ref|YP_006789293.1| hypothetical protein Curi_c24510 [Clostridium acidurici 9a]
gi|407051401|gb|AFS79446.1| CBS domain-containing protein [Clostridium acidurici 9a]
Length = 146
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 22/139 (15%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL---------ALDSISGGNQNDTS 142
TT++E + L E I+G PV++++ K++G+V++ DLL + S+ GG
Sbjct: 18 TTIEELAKVLTENNISGVPVVENE-KIIGIVTEGDLLHKEVNPKTPGVYSVMGGF----- 71
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
+ K F + + L K + ++MT +V E+T +++ A +++ R+P
Sbjct: 72 ------AYLKEFEKYKLELQKLSAHKASEIMTTKLELVTEDTEIKEIASIMINKNINRVP 125
Query: 203 VVDGYGKLVGLITRGNVVR 221
VV GKLVG+++R +V++
Sbjct: 126 VVRD-GKLVGIVSRADVLK 143
>gi|325971923|ref|YP_004248114.1| hypothetical protein [Sphaerochaeta globus str. Buddy]
gi|324027161|gb|ADY13920.1| CBS domain containing membrane protein [Sphaerochaeta globus str.
Buddy]
Length = 214
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 77/134 (57%), Gaps = 18/134 (13%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
++ EA + ++++ PV+D + KLVG++++ D+L P+ S+
Sbjct: 19 SIAEASALMKQEKVHRLPVLDKEKKLVGIITEKDILYAT-------------PSPASSL- 64
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
+ +E+ LLSK V LM+ + ++++T +E+AAR++++ LPV++G KL+G
Sbjct: 65 SIHEMAYLLSKLT---VKKLMSKNVVTINKDTTVEEAARMMVDQDLSSLPVLEG-DKLIG 120
Query: 213 LITRGNVVRAALQI 226
++T+ ++ + L++
Sbjct: 121 IVTKSDMFKILLEL 134
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 173 MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
MT P+ + ++ +A+ L+ + K RLPV+D KLVG+IT +++ A
Sbjct: 7 MTRNPVTATPDMSIAEASALMKQEKVHRLPVLDKEKKLVGIITEKDILYA 56
>gi|357414758|ref|YP_004926494.1| transport-associated protein [Streptomyces flavogriseus ATCC 33331]
gi|320012127|gb|ADW06977.1| transport-associated protein [Streptomyces flavogriseus ATCC 33331]
Length = 224
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132
+ V D MT+ + AV E + + + ++T PV++ + ++VGV+S+ DLL +
Sbjct: 7 HRVKDVMTQT--VVAVGLDARFKEIVAAMNQWQVTAVPVLEGEGRVVGVISEADLLLKEE 64
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLL--SKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
+ G D ++ + +RL +K DLM+ + V + L +AA
Sbjct: 65 LRG---EDATMI----------GQGERLTDHAKAGAVTARDLMSSPAVTVATDAPLPEAA 111
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
RL+ + +RLPVVD G L G+++R +V++ L+ D
Sbjct: 112 RLMARHRVKRLPVVDERGVLKGIVSRIDVLKVFLRTDDD 150
>gi|257792227|ref|YP_003182833.1| EmrB/QacA subfamily drug resistance transporter [Eggerthella lenta
DSM 2243]
gi|257476124|gb|ACV56444.1| drug resistance transporter, EmrB/QacA subfamily [Eggerthella lenta
DSM 2243]
Length = 657
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 43/176 (24%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL---------LALDS 132
K D++ + TV EA++ LV++ I+ P++D+ K VG VSD D+ + +D
Sbjct: 481 KRDVYTLPANATVAEAMQVLVDRHISAAPLVDEQGKAVGFVSDGDIMRYLSKRSQMLMDP 540
Query: 133 I---------SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGK--VVGDLMTPAPLVVH 181
+ GGNQ+ + +EL + +K+ G ++G V
Sbjct: 541 VVMIMQTVDADGGNQDFA----------RKLDELMGMPAKSIGAKGIIG---------VD 581
Query: 182 ENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ---IKRDGERST 234
+ +L + R+L E +++PV+D G++VG+I R ++ ++Q +RD E ++
Sbjct: 582 VHADLPEVCRVLGENHLKKVPVLD-EGQVVGVINRSDITHYSMQQYLAERDAEAAS 636
>gi|239814766|ref|YP_002943676.1| CBS domain containing membrane protein [Variovorax paradoxus S110]
gi|239801343|gb|ACS18410.1| CBS domain containing membrane protein [Variovorax paradoxus S110]
Length = 376
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R GT GD M++ D +V+ T + EA + ++RI PV D ++VG+V+ D
Sbjct: 224 RLGTLHCGDIMSR--DPVSVEFGTPLQEAWMLMNQRRIKALPVTDRTRRVVGIVTQADFF 281
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
Q D + + R + +VVG +MT V + + D
Sbjct: 282 --------RQLDLEHHEGIAGRLRDLIRATRTVVSNKPEVVGQIMTRQVRVASADRPVVD 333
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
L E + +P++D +L G+IT+ + VRA + R
Sbjct: 334 LVPLFSEGGHHHIPIIDHEKRLTGMITQSDFVRALYRAVR 373
>gi|448560650|ref|ZP_21634098.1| metalloprotease [Haloferax prahovense DSM 18310]
gi|445722300|gb|ELZ73963.1| metalloprotease [Haloferax prahovense DSM 18310]
Length = 390
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +E+L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTSRENLDVVDERTSVAELLERMFVERHTGYPVLRNG-NLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELTTITPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G LVGL++R ++V A I+ G
Sbjct: 338 QERGVGRLPVVDETGDLVGLVSRSDLVTAFNIIRSRG 374
>gi|317482260|ref|ZP_07941281.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316916276|gb|EFV37677.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 683
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVD G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDADGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|153955500|ref|YP_001396265.1| transporter protein [Clostridium kluyveri DSM 555]
gi|219855903|ref|YP_002473025.1| hypothetical protein CKR_2560 [Clostridium kluyveri NBRC 12016]
gi|146348358|gb|EDK34894.1| Predicted transporter protein [Clostridium kluyveri DSM 555]
gi|219569627|dbj|BAH07611.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 621
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Query: 79 MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL---ALDSISG 135
+ K D + V +++ +E+ + R +G PV+D + ++VG +SD D+L A +
Sbjct: 471 IAMKVDPYTVSRYDNLEQVVEKFINYRTSGLPVVDGEKRIVGFISDGDVLRYMAKQDVHF 530
Query: 136 GNQNDTSLFPNVNS-TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G ++ + + P+ S T K N LQ + + K + AP +T L + RL+
Sbjct: 531 GAESYSVVLPDTESFTAKAKNLLQMNVMEIASKHI----ITAP----RSTPLLEVCRLIS 582
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVR 221
E K +LPV G L+G ++RG+++R
Sbjct: 583 ERKLNKLPVTQD-GVLIGTVSRGDIMR 608
>gi|298230935|ref|ZP_06964616.1| AcuB family protein [Streptococcus pneumoniae str. Canada MDR_19F]
Length = 196
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G S P+ +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAQAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD Y ++ G+IT +V +A L+I GE
Sbjct: 103 KNKIGILPVVDNY-QVYGVITDRDVFQAFLEIAGYGEE 139
>gi|428311380|ref|YP_007122357.1| chloride channel protein EriC [Microcoleus sp. PCC 7113]
gi|428252992|gb|AFZ18951.1| chloride channel protein EriC [Microcoleus sp. PCC 7113]
Length = 883
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 32/149 (21%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D M ++ + + + T+DEA++ GFPV+DD +LVG+++ D I
Sbjct: 447 TAADLMQRR--VETLASQMTLDEAVQAFSRSHHRGFPVVDDG-ELVGIITQTD------I 497
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+ QN S+ + +MTP P+ V L + LL
Sbjct: 498 ANATQN----------------------SQPGDTPLAQIMTPQPITVKPIYTLSEVLFLL 535
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+ RLPV + KLVG+ITR +++RA
Sbjct: 536 NRYQLSRLPVTEDR-KLVGIITRADIIRA 563
>gi|410670371|ref|YP_006922742.1| hypothetical protein Mpsy_1166 [Methanolobus psychrophilus R15]
gi|409169499|gb|AFV23374.1| hypothetical protein Mpsy_1166 [Methanolobus psychrophilus R15]
Length = 154
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 14/147 (9%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ T+ + L + I+G PV+D K+VG+VS+ DLL L + + T L
Sbjct: 10 DVVVCSPEDTIGDVARLLKQNNISGLPVVDGG-KVVGIVSEGDLLKLLEVP----DRTGL 64
Query: 144 F-PNVNSTWKT-------FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
+ P+ ++ + E +R+L K V ++M V ++E A+ L+ +
Sbjct: 65 WLPSPLEVFEVPIRELINWEETKRMLDDVGSKSVEEIMNKKVHTVSPEDSIEKASALITK 124
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVRA 222
K RLPV++G G +VG++TRG+++R
Sbjct: 125 HKINRLPVMEG-GLMVGIVTRGDIIRG 150
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
V D+M P +V + D ARLL + LPVVDG GK+VG+++ G++++
Sbjct: 3 VKDVMNPDVVVCSPEDTIGDVARLLKQNNISGLPVVDG-GKVVGIVSEGDLLK 54
>gi|197119665|ref|YP_002140092.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089025|gb|ACH40296.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
Length = 216
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 21/145 (14%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152
+V EAL + +K+I PV++ KLVG+VSD DL TSL + W
Sbjct: 19 SVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLF-----QASPSPATSL-----AIW- 67
Query: 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212
E+ LL+K V M + V E+T LE+AAR++++ + LPV+ G LVG
Sbjct: 68 ---EIHDLLAKLT---VDKTMATDVITVTEDTPLEEAARVMVDRRIGGLPVMKGDA-LVG 120
Query: 213 LITRGNVVRAALQI---KRDGERST 234
+IT ++ +A L++ +R G R T
Sbjct: 121 IITESDLFQALLELLGGRRHGVRLT 145
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 39/56 (69%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+V D MTP P+ + + ++ +A RL+ + K RRLPVV+ GKLVG+++ ++ +A+
Sbjct: 2 LVRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQAS 57
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 80 TKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQ 138
T D+ V T ++EA +V++RI G PV+ D LVG++++ DL AL + GG +
Sbjct: 81 TMATDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD-ALVGIITESDLFQALLELLGGRR 139
Query: 139 NDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170
+ L T ++ + + + G +VG
Sbjct: 140 HGVRLTVTTTGAKGTLADVAQTIYQAGGDIVG 171
>gi|116249467|ref|YP_765305.1| hypothetical protein pRL90009 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254115|emb|CAK03717.1| conserved CBS domain hypothetical protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 226
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 79/146 (54%), Gaps = 14/146 (9%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MT ++ ++ + A+ +++ ++G PVIDD+ ++ G++++ DLL
Sbjct: 5 DIMTT--NVVSIGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGLLTEGDLLL------- 55
Query: 137 NQNDTSLFPNVNSTWKTFNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ + P + +E L+R +S +NG V D+M+ +V ++ + D A L
Sbjct: 56 -RREIRFAPRAARAPEIISEIDLERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQ 113
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVV 220
+ +RLP+V+ G+LVG+++R +++
Sbjct: 114 AHRIKRLPIVED-GRLVGIVSRRDIL 138
>gi|386001693|ref|YP_005919992.1| Putative signal transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
gi|357209749|gb|AET64369.1| Putative signal transduction protein with CBS domains [Methanosaeta
harundinacea 6Ac]
Length = 287
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 37/151 (24%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ V + D L+ L E+ ++G PV+ +LVG+V+ DLL ++ T+L
Sbjct: 13 DVAYVTVPGSRDMVLKALQERHVSGVPVVKGG-ELVGMVTRTDLL-----RNPEEDQTAL 66
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
LMT PLVVH + ++ +AAR L E RRLPV
Sbjct: 67 ----------------------------LMTRDPLVVHPDDDVVEAARHLAENDIRRLPV 98
Query: 204 VDGYGKLVGLITRGNVVR--AALQIKRDGER 232
V+ G LVG+++ +V+R A L+IKR ER
Sbjct: 99 VED-GALVGIVSVADVIRVVADLEIKRPIER 128
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 106 ITGFPVIDDDWKLVGVVSDYDLL---------ALDSISGGNQNDTSLFPNVNSTWKTFNE 156
+ PVID + KLVG+VSD DL+ + +S N D + + T +
Sbjct: 155 VQASPVIDSELKLVGIVSDRDLINASVIEDSVEMSDMSSANDEDEWTWESTRDTLNFYYG 214
Query: 157 LQRL-LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+ R+ L K V M PA + + + + + AR+++ +LPVV + KL G++
Sbjct: 215 VSRISLRKIP---VKQAMVPAVTAI-KTSEVSECARVMMRKGIDQLPVVTAHQKLAGMLK 270
Query: 216 RGNVVRAALQ 225
+++ A +Q
Sbjct: 271 DSDLLWALIQ 280
>gi|419847222|ref|ZP_14370405.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|419855291|ref|ZP_14378051.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
gi|386411373|gb|EIJ26106.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|386415756|gb|EIJ30278.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
Length = 683
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
+ + + ++ PV++ D +LVG VSD D++ SI+ S ST
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIATYESRTVS--TGTGSTMVV 601
Query: 154 FNELQRLLSKT---NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKL 210
F++ + + SK +GK V D+ T + + ++ + AR+L + ++++LPVVD G+L
Sbjct: 602 FDD-ETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDADGRL 660
Query: 211 VGLITRGNVVRAAL 224
VG+I R +V+ A
Sbjct: 661 VGVIRRKSVMEHAF 674
>gi|153005297|ref|YP_001379622.1| signal transduction protein [Anaeromyxobacter sp. Fw109-5]
gi|152028870|gb|ABS26638.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter sp. Fw109-5]
Length = 166
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 33/166 (19%)
Query: 66 VPPRNGTYTVGDFMTKKEDLHAVKTTT--TVDEALERLVEKRITGFPVIDDDWKLVGVVS 123
VP +V DFM+K DL V + + E+L RL I PV+ D +LVG+V+
Sbjct: 15 VPESTPMISVADFMSK--DLVTVGESDDLALAESLLRL--SGIRHLPVVKD-GRLVGLVT 69
Query: 124 DYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHEN 183
D+L G S +T V ++MT V
Sbjct: 70 QRDVL-----RSGQSG--------RSGARTL-------------AVSEVMTRDLTTVRPA 103
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
T L AARL+LE KY LPV D G+LVG++T + VR A + RD
Sbjct: 104 TALSQAARLMLERKYGCLPVCDEEGRLVGIVTEADFVRFAADVVRD 149
>gi|398808664|ref|ZP_10567524.1| CBS-domain-containing membrane protein [Variovorax sp. CF313]
gi|398087016|gb|EJL77614.1| CBS-domain-containing membrane protein [Variovorax sp. CF313]
Length = 375
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R GT T D M+ +V+ T + EA + E+ I PV D ++VG+V+ D
Sbjct: 224 RLGTLTCADIMSSVPI--SVEFGTPLQEAWALMHERHIKALPVTDRTRRVVGIVTQADFF 281
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
Q D + + R + +VVG +MT V + + D
Sbjct: 282 --------RQLDLQHHDGIAGKLRDLIRATRTVMSNKPEVVGQIMTRQVRVASADRPVVD 333
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L E + +P++DG +L G+IT+ + VRA
Sbjct: 334 LVPLFSEGGHHHIPIIDGEKRLTGMITQSDFVRA 367
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 155 NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
EL+ + D+M+ P+ V T L++A L+ E + LPV D ++VG++
Sbjct: 216 TELESYKRRLGTLTCADIMSSVPISVEFGTPLQEAWALMHERHIKALPVTDRTRRVVGIV 275
Query: 215 TRGNVVR 221
T+ + R
Sbjct: 276 TQADFFR 282
>gi|225860728|ref|YP_002742237.1| AcuB family protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298255816|ref|ZP_06979402.1| AcuB family protein [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502539|ref|YP_003724479.1| AcuB family protein [Streptococcus pneumoniae TCH8431/19A]
gi|387787916|ref|YP_006252984.1| acetoin utilization protein AcuB [Streptococcus pneumoniae ST556]
gi|417312325|ref|ZP_12099039.1| CBS domain pair family protein [Streptococcus pneumoniae GA04375]
gi|418082630|ref|ZP_12719832.1| CBS domain pair family protein [Streptococcus pneumoniae GA44288]
gi|418084826|ref|ZP_12722012.1| CBS domain pair family protein [Streptococcus pneumoniae GA47281]
gi|418093594|ref|ZP_12730723.1| CBS domain pair family protein [Streptococcus pneumoniae GA49138]
gi|418100486|ref|ZP_12737574.1| CBS domain pair family protein [Streptococcus pneumoniae 7286-06]
gi|418118690|ref|ZP_12755648.1| CBS domain pair family protein [Streptococcus pneumoniae GA18523]
gi|418141352|ref|ZP_12778165.1| CBS domain pair family protein [Streptococcus pneumoniae GA13455]
gi|418150917|ref|ZP_12787664.1| CBS domain pair family protein [Streptococcus pneumoniae GA14798]
gi|418152491|ref|ZP_12789231.1| CBS domain pair family protein [Streptococcus pneumoniae GA16121]
gi|418157052|ref|ZP_12793768.1| CBS domain pair family protein [Streptococcus pneumoniae GA16833]
gi|418164092|ref|ZP_12800766.1| CBS domain pair family protein [Streptococcus pneumoniae GA17371]
gi|418170966|ref|ZP_12807593.1| CBS domain pair family protein [Streptococcus pneumoniae GA19451]
gi|418198265|ref|ZP_12834725.1| CBS domain pair family protein [Streptococcus pneumoniae GA47778]
gi|418223024|ref|ZP_12849669.1| CBS domain pair family protein [Streptococcus pneumoniae 5185-06]
gi|418227343|ref|ZP_12853962.1| CBS domain pair family protein [Streptococcus pneumoniae 3063-00]
gi|419424785|ref|ZP_13964985.1| CBS domain protein [Streptococcus pneumoniae 7533-05]
gi|419429011|ref|ZP_13969180.1| CBS domain protein [Streptococcus pneumoniae GA11856]
gi|419435629|ref|ZP_13975724.1| CBS domain protein [Streptococcus pneumoniae 8190-05]
gi|419437711|ref|ZP_13977783.1| CBS domain protein [Streptococcus pneumoniae GA13499]
gi|419444365|ref|ZP_13984380.1| CBS domain protein [Streptococcus pneumoniae GA19923]
gi|419446493|ref|ZP_13986498.1| CBS domain protein [Streptococcus pneumoniae 7879-04]
gi|419449058|ref|ZP_13989055.1| CBS domain protein [Streptococcus pneumoniae 4075-00]
gi|419450728|ref|ZP_13990715.1| CBS domain protein [Streptococcus pneumoniae EU-NP02]
gi|419501493|ref|ZP_14041179.1| CBS domain protein [Streptococcus pneumoniae GA47628]
gi|419518558|ref|ZP_14058165.1| CBS domain protein [Streptococcus pneumoniae GA08825]
gi|419527590|ref|ZP_14067134.1| CBS domain protein [Streptococcus pneumoniae GA17719]
gi|421287241|ref|ZP_15738007.1| CBS domain pair family protein [Streptococcus pneumoniae GA58771]
gi|225728031|gb|ACO23882.1| AcuB family protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298238134|gb|ADI69265.1| AcuB family protein [Streptococcus pneumoniae TCH8431/19A]
gi|327390111|gb|EGE88454.1| CBS domain pair family protein [Streptococcus pneumoniae GA04375]
gi|353758067|gb|EHD38660.1| CBS domain pair family protein [Streptococcus pneumoniae GA44288]
gi|353760061|gb|EHD40643.1| CBS domain pair family protein [Streptococcus pneumoniae GA47281]
gi|353765470|gb|EHD46012.1| CBS domain pair family protein [Streptococcus pneumoniae GA49138]
gi|353773195|gb|EHD53694.1| CBS domain pair family protein [Streptococcus pneumoniae 7286-06]
gi|353791391|gb|EHD71769.1| CBS domain pair family protein [Streptococcus pneumoniae GA18523]
gi|353805603|gb|EHD85877.1| CBS domain pair family protein [Streptococcus pneumoniae GA13455]
gi|353814800|gb|EHD95023.1| CBS domain pair family protein [Streptococcus pneumoniae GA14798]
gi|353819136|gb|EHD99334.1| CBS domain pair family protein [Streptococcus pneumoniae GA16121]
gi|353823500|gb|EHE03674.1| CBS domain pair family protein [Streptococcus pneumoniae GA16833]
gi|353832419|gb|EHE12537.1| CBS domain pair family protein [Streptococcus pneumoniae GA17371]
gi|353837136|gb|EHE17222.1| CBS domain pair family protein [Streptococcus pneumoniae GA19451]
gi|353862903|gb|EHE42833.1| CBS domain pair family protein [Streptococcus pneumoniae GA47778]
gi|353880296|gb|EHE60112.1| CBS domain pair family protein [Streptococcus pneumoniae 5185-06]
gi|353882944|gb|EHE62753.1| CBS domain pair family protein [Streptococcus pneumoniae 3063-00]
gi|379137658|gb|AFC94449.1| acetoin utilization protein AcuB [Streptococcus pneumoniae ST556]
gi|379540165|gb|EHZ05339.1| CBS domain protein [Streptococcus pneumoniae GA13499]
gi|379552271|gb|EHZ17361.1| CBS domain protein [Streptococcus pneumoniae GA11856]
gi|379566535|gb|EHZ31523.1| CBS domain protein [Streptococcus pneumoniae GA17719]
gi|379572058|gb|EHZ37015.1| CBS domain protein [Streptococcus pneumoniae GA19923]
gi|379601854|gb|EHZ66626.1| CBS domain protein [Streptococcus pneumoniae GA47628]
gi|379614033|gb|EHZ78743.1| CBS domain protein [Streptococcus pneumoniae 7879-04]
gi|379616406|gb|EHZ81102.1| CBS domain protein [Streptococcus pneumoniae 8190-05]
gi|379620440|gb|EHZ85096.1| CBS domain protein [Streptococcus pneumoniae 7533-05]
gi|379624116|gb|EHZ88749.1| CBS domain protein [Streptococcus pneumoniae 4075-00]
gi|379624627|gb|EHZ89258.1| CBS domain protein [Streptococcus pneumoniae EU-NP02]
gi|379641537|gb|EIA06072.1| CBS domain protein [Streptococcus pneumoniae GA08825]
gi|395889650|gb|EJH00657.1| CBS domain pair family protein [Streptococcus pneumoniae GA58771]
Length = 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G S P+ +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAQAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD Y ++ G+IT +V +A L+I GE
Sbjct: 103 KNKIGILPVVDNY-QVYGVITDRDVFQAFLEIAGYGEE 139
>gi|108803646|ref|YP_643583.1| signal transduction protein [Rubrobacter xylanophilus DSM 9941]
gi|108764889|gb|ABG03771.1| putative signal transduction protein with CBS domains [Rubrobacter
xylanophilus DSM 9941]
Length = 160
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS- 132
TVGD M D + TV+ A+ E I+G PV++D +LVG+V++ DL+ D+
Sbjct: 10 TVGDVM--HADWPTLGPEDTVERAIRLFAESHISGAPVLEDG-RLVGIVTEGDLIFRDAE 66
Query: 133 ISGGNQNDT--SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
I D + P +W+ + E K+ G VG++MT + V T L +AA
Sbjct: 67 IKAPGFLDILGGIIPL--GSWEEYREET---LKSAGVTVGEVMTRDVVTVSPQTPLPEAA 121
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+ + + LPVV+G L G+I+R +++ AL + R
Sbjct: 122 TAMARRRIKLLPVVEGERLLRGVISRMDIL--ALHVIR 157
>gi|449886273|ref|ZP_21786097.1| putative acetoin utilization protein [Streptococcus mutans SA41]
gi|449999339|ref|ZP_21824479.1| putative acetoin utilization protein [Streptococcus mutans N29]
gi|449187075|gb|EMB88876.1| putative acetoin utilization protein [Streptococcus mutans N29]
gi|449254452|gb|EMC52360.1| putative acetoin utilization protein [Streptococcus mutans SA41]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMNYLLNKTKAR---DVMIKDVITVSKDARLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|450159921|ref|ZP_21879722.1| putative acetoin utilization protein [Streptococcus mutans 66-2A]
gi|449240685|gb|EMC39348.1| putative acetoin utilization protein [Streptococcus mutans 66-2A]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMNYLLNKTKAR---DVMIKDVITVSKDARLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|88808652|ref|ZP_01124162.1| CBS domain protein [Synechococcus sp. WH 7805]
gi|88787640|gb|EAR18797.1| CBS domain protein [Synechococcus sp. WH 7805]
Length = 156
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TVG+ M+ + V T + +A+ L + I+G PV+ DD LVG +++ +L+ +S
Sbjct: 6 TVGEVMSAP--VLTVTPATPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLMVRES- 62
Query: 134 SGGNQNDTSLFPNVNSTWKTFNEL--QRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
G + + ++S N L + + + G V DLM+ ++ L AA
Sbjct: 63 -GVDAGPYVML--LDSVIYLRNPLNWDKQVHQVLGNTVADLMSRDSHCCAQSLPLPKAAS 119
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
+L E +RL VVD + VG++TRG+VVRA
Sbjct: 120 MLHEKGTQRLIVVDEERRPVGMLTRGDVVRA 150
>gi|449881924|ref|ZP_21784689.1| putative acetoin utilization protein [Streptococcus mutans SA38]
gi|449893410|ref|ZP_21788702.1| putative acetoin utilization protein [Streptococcus mutans SF12]
gi|449918485|ref|ZP_21797373.1| putative acetoin utilization protein [Streptococcus mutans 1SM1]
gi|449965343|ref|ZP_21811844.1| putative acetoin utilization protein [Streptococcus mutans 15VF2]
gi|450009923|ref|ZP_21828427.1| putative acetoin utilization protein [Streptococcus mutans A19]
gi|450024689|ref|ZP_21831369.1| putative acetoin utilization protein [Streptococcus mutans U138]
gi|450046111|ref|ZP_21838771.1| putative acetoin utilization protein [Streptococcus mutans N34]
gi|450104990|ref|ZP_21859594.1| putative acetoin utilization protein [Streptococcus mutans SF14]
gi|450115012|ref|ZP_21863671.1| putative acetoin utilization protein [Streptococcus mutans ST1]
gi|450134117|ref|ZP_21870952.1| putative acetoin utilization protein [Streptococcus mutans NLML8]
gi|450175824|ref|ZP_21885423.1| putative acetoin utilization protein [Streptococcus mutans SM1]
gi|449149913|gb|EMB53694.1| putative acetoin utilization protein [Streptococcus mutans NLML8]
gi|449160329|gb|EMB63602.1| putative acetoin utilization protein [Streptococcus mutans 1SM1]
gi|449171340|gb|EMB74005.1| putative acetoin utilization protein [Streptococcus mutans 15VF2]
gi|449190552|gb|EMB92114.1| putative acetoin utilization protein [Streptococcus mutans A19]
gi|449191738|gb|EMB93204.1| putative acetoin utilization protein [Streptococcus mutans U138]
gi|449199285|gb|EMC00359.1| putative acetoin utilization protein [Streptococcus mutans N34]
gi|449225210|gb|EMC24821.1| putative acetoin utilization protein [Streptococcus mutans SF14]
gi|449228481|gb|EMC27846.1| putative acetoin utilization protein [Streptococcus mutans ST1]
gi|449246202|gb|EMC44514.1| putative acetoin utilization protein [Streptococcus mutans SM1]
gi|449250733|gb|EMC48782.1| putative acetoin utilization protein [Streptococcus mutans SA38]
gi|449255841|gb|EMC53681.1| putative acetoin utilization protein [Streptococcus mutans SF12]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMNYLLNKTKAR---DVMIKDVITVSKDARLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|433637791|ref|YP_007283551.1| putative transcriptional regulator containing CBS domains
[Halovivax ruber XH-70]
gi|433289595|gb|AGB15418.1| putative transcriptional regulator containing CBS domains
[Halovivax ruber XH-70]
Length = 269
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 39/161 (24%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-RITGFPVIDDDWKLVGVVSDYDL 127
R VG++MT+ D+ V TV+E R+ E +G+PV D ++ G VS DL
Sbjct: 6 RGSKPQVGEYMTQ--DVATVAPEATVEEVAVRIAESDNHSGYPVCDR-RRVEGFVSARDL 62
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L D +G+ + +M+ +V H +
Sbjct: 63 LLAD---------------------------------DGEPIWKVMSTNLIVAHPEMKVT 89
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
DAAR++L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 90 DAARVILRSGIQKLPVVDDAGNLVGIISNADVIRS--QIER 128
>gi|449924036|ref|ZP_21799376.1| putative acetoin utilization protein [Streptococcus mutans 4SM1]
gi|449163333|gb|EMB66441.1| putative acetoin utilization protein [Streptococcus mutans 4SM1]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMDYLLNKTKAR---DVMIKDVITVSKDARLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|21226927|ref|NP_632849.1| hypothetical protein MM_0825 [Methanosarcina mazei Go1]
gi|452209408|ref|YP_007489522.1| hypothetical protein MmTuc01_0846 [Methanosarcina mazei Tuc01]
gi|20905236|gb|AAM30521.1| conserved protein [Methanosarcina mazei Go1]
gi|452099310|gb|AGF96250.1| hypothetical protein MmTuc01_0846 [Methanosarcina mazei Tuc01]
Length = 283
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 74/155 (47%), Gaps = 39/155 (25%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P+N + D M + D+ + DE L+ L K I+G PV+ D K+VG+V+ +L
Sbjct: 2 PKN--IFIEDIMVR--DVACATLPGSRDEVLKILKNKHISGVPVLKDS-KVVGIVTRTNL 56
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L QN E Q L LMT P+ + ++L+
Sbjct: 57 L---------QNP--------------EEEQLAL----------LMTRDPITISPGSDLQ 83
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
AARLLL+ RRLPVVD GKLVGL+T +VV A
Sbjct: 84 SAARLLLQHGIRRLPVVDD-GKLVGLVTVADVVGA 117
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 106 ITGFPVIDDDWKLVGVVSDYDLLA---------LDSISGGNQNDTSLFPNVNSTWKTFNE 156
+ PV+D +L+G++SD D+++ + +S G +D + ++ T +
Sbjct: 156 VKAVPVLDAALELIGIISDRDIISASVIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYS 215
Query: 157 LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
+ R+ K + D+M P+ ++ D AR + + ++P+++ KL GL+
Sbjct: 216 VSRI--KVPNLIGSDIMIREPITATYIASISDCARKMKRNRIDQIPIINSNRKLQGLLRD 273
Query: 217 GNVVRAALQ 225
++++ ++
Sbjct: 274 HDLLKPLIE 282
>gi|395760675|ref|ZP_10441344.1| hypothetical protein JPAM2_02821 [Janthinobacterium lividum PAMC
25724]
Length = 387
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R G T D M+K D+ +V+ T +D A + ++ PV++ +++G+++ D L
Sbjct: 234 RFGVVTCADIMSK--DVLSVEFGTPLDVAWRTMRSHQVGALPVVNRARRVIGIITQTDFL 291
Query: 129 A---LDSISGGNQNDTSLFPNVNSTWKTFNELQR--LLSKTNGKVVGDLMTPAPLVVHEN 183
LD G Q L LQR L + VG LMT +P +
Sbjct: 292 CHGGLDDYQGVRQRLRDL-------------LQRSGLSHSDKPEAVGQLMTASPHTACLD 338
Query: 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
T + D L+ + Y+ +P++D +L G+I++ +++ A Q
Sbjct: 339 TPIIDLLPLMADAGYQHIPILDATERLAGIISQSDLMAALYQ 380
>gi|449956378|ref|ZP_21809474.1| putative acetoin utilization protein [Streptococcus mutans 4VF1]
gi|450138358|ref|ZP_21872127.1| putative acetoin utilization protein [Streptococcus mutans NLML1]
gi|449170660|gb|EMB73356.1| putative acetoin utilization protein [Streptococcus mutans 4VF1]
gi|449234141|gb|EMC33165.1| putative acetoin utilization protein [Streptococcus mutans NLML1]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMNYLLNKTKAR---DVMIKDVITVSKDARLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|309798594|ref|ZP_07692869.1| CBS domain protein [Streptococcus infantis SK1302]
gi|308117830|gb|EFO55231.1| CBS domain protein [Streptococcus infantis SK1302]
Length = 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D KLVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRNVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPV+D ++ G+IT +V RA L+I GE
Sbjct: 103 KNKIGILPVIDN-EQVYGVITDRDVFRAFLEISGYGEE 139
>gi|290579979|ref|YP_003484371.1| acetoin utilization protein [Streptococcus mutans NN2025]
gi|387785650|ref|YP_006250746.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans LJ23]
gi|397650262|ref|YP_006490789.1| acetoin utilization protein, acetoin dehydrogenase [Streptococcus
mutans GS-5]
gi|449874971|ref|ZP_21781934.1| putative acetoin utilization protein [Streptococcus mutans S1B]
gi|449899450|ref|ZP_21791029.1| putative acetoin utilization protein [Streptococcus mutans R221]
gi|449910100|ref|ZP_21794537.1| putative acetoin utilization protein [Streptococcus mutans OMZ175]
gi|449914637|ref|ZP_21795705.1| putative acetoin utilization protein [Streptococcus mutans 15JP3]
gi|449932118|ref|ZP_21802681.1| putative acetoin utilization protein [Streptococcus mutans 3SN1]
gi|449936405|ref|ZP_21803969.1| putative acetoin utilization protein [Streptococcus mutans 2ST1]
gi|449944352|ref|ZP_21806709.1| putative acetoin utilization protein [Streptococcus mutans 11A1]
gi|449947433|ref|ZP_21807378.1| putative acetoin utilization protein [Streptococcus mutans 11SSST2]
gi|449969045|ref|ZP_21812984.1| putative acetoin utilization protein [Streptococcus mutans 2VS1]
gi|449974234|ref|ZP_21815172.1| putative acetoin utilization protein [Streptococcus mutans 11VS1]
gi|449980981|ref|ZP_21817521.1| putative acetoin utilization protein [Streptococcus mutans 5SM3]
gi|449990622|ref|ZP_21821659.1| putative acetoin utilization protein [Streptococcus mutans NVAB]
gi|449995303|ref|ZP_21822923.1| putative acetoin utilization protein [Streptococcus mutans A9]
gi|450005210|ref|ZP_21826568.1| putative acetoin utilization protein [Streptococcus mutans NMT4863]
gi|450031287|ref|ZP_21833620.1| putative acetoin utilization protein [Streptococcus mutans G123]
gi|450035293|ref|ZP_21834934.1| putative acetoin utilization protein [Streptococcus mutans M21]
gi|450039073|ref|ZP_21836042.1| putative acetoin utilization protein [Streptococcus mutans T4]
gi|450049691|ref|ZP_21839812.1| putative acetoin utilization protein [Streptococcus mutans NFSM1]
gi|450056209|ref|ZP_21841916.1| putative acetoin utilization protein [Streptococcus mutans NLML4]
gi|450062714|ref|ZP_21844491.1| putative acetoin utilization protein [Streptococcus mutans NLML5]
gi|450072906|ref|ZP_21848831.1| putative acetoin utilization protein [Streptococcus mutans M2A]
gi|450078859|ref|ZP_21851171.1| putative acetoin utilization protein [Streptococcus mutans N3209]
gi|450087667|ref|ZP_21854410.1| putative acetoin utilization protein [Streptococcus mutans NV1996]
gi|450094123|ref|ZP_21856897.1| putative acetoin utilization protein [Streptococcus mutans W6]
gi|450098395|ref|ZP_21857991.1| putative acetoin utilization protein [Streptococcus mutans SF1]
gi|450112061|ref|ZP_21863036.1| putative acetoin utilization protein [Streptococcus mutans SM6]
gi|450121177|ref|ZP_21866180.1| putative acetoin utilization protein [Streptococcus mutans ST6]
gi|450127474|ref|ZP_21868603.1| putative acetoin utilization protein [Streptococcus mutans U2A]
gi|450143119|ref|ZP_21873252.1| putative acetoin utilization protein [Streptococcus mutans 1ID3]
gi|450148321|ref|ZP_21875559.1| putative acetoin utilization protein [Streptococcus mutans 14D]
gi|450155935|ref|ZP_21878542.1| putative acetoin utilization protein [Streptococcus mutans 21]
gi|450166051|ref|ZP_21882145.1| putative acetoin utilization protein [Streptococcus mutans B]
gi|450171654|ref|ZP_21884108.1| putative acetoin utilization protein [Streptococcus mutans SM4]
gi|450181087|ref|ZP_21887620.1| putative acetoin utilization protein [Streptococcus mutans 24]
gi|254996878|dbj|BAH87479.1| putative acetoin utilization protein [Streptococcus mutans NN2025]
gi|379132051|dbj|BAL68803.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans LJ23]
gi|392603831|gb|AFM81995.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans GS-5]
gi|449148579|gb|EMB52436.1| putative acetoin utilization protein [Streptococcus mutans 11A1]
gi|449152730|gb|EMB56430.1| putative acetoin utilization protein [Streptococcus mutans 1ID3]
gi|449157740|gb|EMB61175.1| putative acetoin utilization protein [Streptococcus mutans 15JP3]
gi|449161731|gb|EMB64905.1| putative acetoin utilization protein [Streptococcus mutans 3SN1]
gi|449165620|gb|EMB68610.1| putative acetoin utilization protein [Streptococcus mutans 2ST1]
gi|449168618|gb|EMB71426.1| putative acetoin utilization protein [Streptococcus mutans 11SSST2]
gi|449174484|gb|EMB76970.1| putative acetoin utilization protein [Streptococcus mutans 2VS1]
gi|449176169|gb|EMB78528.1| putative acetoin utilization protein [Streptococcus mutans 5SM3]
gi|449178610|gb|EMB80863.1| putative acetoin utilization protein [Streptococcus mutans 11VS1]
gi|449181560|gb|EMB83641.1| putative acetoin utilization protein [Streptococcus mutans NVAB]
gi|449184598|gb|EMB86531.1| putative acetoin utilization protein [Streptococcus mutans A9]
gi|449188852|gb|EMB90542.1| putative acetoin utilization protein [Streptococcus mutans NMT4863]
gi|449191795|gb|EMB93255.1| putative acetoin utilization protein [Streptococcus mutans G123]
gi|449195658|gb|EMB96971.1| putative acetoin utilization protein [Streptococcus mutans M21]
gi|449200729|gb|EMC01750.1| putative acetoin utilization protein [Streptococcus mutans T4]
gi|449203442|gb|EMC04301.1| putative acetoin utilization protein [Streptococcus mutans NFSM1]
gi|449205446|gb|EMC06193.1| putative acetoin utilization protein [Streptococcus mutans NLML5]
gi|449206987|gb|EMC07671.1| putative acetoin utilization protein [Streptococcus mutans NLML4]
gi|449209720|gb|EMC10228.1| putative acetoin utilization protein [Streptococcus mutans N3209]
gi|449210637|gb|EMC11078.1| putative acetoin utilization protein [Streptococcus mutans M2A]
gi|449216605|gb|EMC16707.1| putative acetoin utilization protein [Streptococcus mutans W6]
gi|449217575|gb|EMC17617.1| putative acetoin utilization protein [Streptococcus mutans NV1996]
gi|449221592|gb|EMC21360.1| putative acetoin utilization protein [Streptococcus mutans SF1]
gi|449222815|gb|EMC22530.1| putative acetoin utilization protein [Streptococcus mutans SM6]
gi|449229447|gb|EMC28761.1| putative acetoin utilization protein [Streptococcus mutans ST6]
gi|449230675|gb|EMC29924.1| putative acetoin utilization protein [Streptococcus mutans U2A]
gi|449236001|gb|EMC34937.1| putative acetoin utilization protein [Streptococcus mutans 14D]
gi|449236497|gb|EMC35412.1| putative acetoin utilization protein [Streptococcus mutans 21]
gi|449240055|gb|EMC38750.1| putative acetoin utilization protein [Streptococcus mutans B]
gi|449243706|gb|EMC42115.1| putative acetoin utilization protein [Streptococcus mutans SM4]
gi|449247375|gb|EMC45658.1| putative acetoin utilization protein [Streptococcus mutans 24]
gi|449254349|gb|EMC52258.1| putative acetoin utilization protein [Streptococcus mutans S1B]
gi|449258381|gb|EMC55963.1| putative acetoin utilization protein [Streptococcus mutans R221]
gi|449260247|gb|EMC57751.1| putative acetoin utilization protein [Streptococcus mutans OMZ175]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMNYLLNKTKAR---DVMIKDVITVSKDARLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|450066028|ref|ZP_21845752.1| putative acetoin utilization protein [Streptococcus mutans NLML9]
gi|449209347|gb|EMC09876.1| putative acetoin utilization protein [Streptococcus mutans NLML9]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMNYLLNKTKAR---DVMIKDVITVSKDARLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|435846397|ref|YP_007308647.1| putative transcriptional regulator containing CBS domains
[Natronococcus occultus SP4]
gi|433672665|gb|AGB36857.1| putative transcriptional regulator containing CBS domains
[Natronococcus occultus SP4]
Length = 268
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 39/155 (25%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D+MT+ D+ V TTV E R+ E +GFPV + ++ G VS DLL D
Sbjct: 12 VEDYMTR--DVATVSPETTVGEVANRIAETDNHSGFPVCER-RRVEGFVSARDLLLAD-- 66
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
+G + +MT LV H + DAAR++
Sbjct: 67 -------------------------------DGDPIFKVMTTDLLVAHPEMKVTDAARVI 95
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 96 LRSGIQKLPVVDDAGNLVGIISNADVIRS--QIER 128
>gi|302039062|ref|YP_003799384.1| hypothetical protein NIDE3783 [Candidatus Nitrospira defluvii]
gi|300607126|emb|CBK43459.1| conserved protein of unknown function, contains CBS domain pair
[Candidatus Nitrospira defluvii]
Length = 157
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 34/158 (21%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDS 132
TVGD + K+ + A + D + +L+ K + PV+D +L GVVS++DLL ALD
Sbjct: 26 TVGDIVNKR--VQAARLDMKGDR-VAKLLLKEGSHVPVVDQAKQLAGVVSEHDLLSALDE 82
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
W + + DLMT P V T+L +
Sbjct: 83 ---------------GQAW-------------SAQTAKDLMTENPYSVPPETSLSTLIHV 114
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ--IKR 228
L E+ +PVV +LVG++TR +VVRAAL+ +KR
Sbjct: 115 LTESDLMSVPVVTAQNRLVGVVTRRDVVRAALRPGVKR 152
>gi|163848958|ref|YP_001637002.1| hypothetical protein Caur_3428 [Chloroflexus aurantiacus J-10-fl]
gi|222526911|ref|YP_002571382.1| putative signal transduction protein with CBS domains [Chloroflexus
sp. Y-400-fl]
gi|163670247|gb|ABY36613.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222450790|gb|ACM55056.1| putative signal transduction protein with CBS domains [Chloroflexus
sp. Y-400-fl]
Length = 145
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 24/152 (15%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V ++MT E+ V +V A ER+ + I PV+D D LVG+++ D+
Sbjct: 4 TERVAEWMT--ENPVTVTPDFSVLAAYERMRARGIRRMPVVDKDGALVGIITRSDI---- 57
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTN--GKVVGDLMTPAPLVVHENTNLEDA 189
P +E +R +++ + G+ V + MTP P+ V + ++ +A
Sbjct: 58 -------EQAMSHPR--------SEEERRMARFSLAGQTVAEYMTPNPITVAADASIGEA 102
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
A +++ + LPV+D G+L+G+IT ++ R
Sbjct: 103 AAMMIRARVSGLPVMDN-GRLIGIITESDIFR 133
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
V + MT P+ V + ++ A + RR+PVVD G LVG+ITR ++ +A +
Sbjct: 7 VAEWMTENPVTVTPDFSVLAAYERMRARGIRRMPVVDKDGALVGIITRSDIEQAMSHPRS 66
Query: 229 DGER 232
+ ER
Sbjct: 67 EEER 70
>gi|448374738|ref|ZP_21558528.1| signal transduction protein with CBS domains [Halovivax asiaticus
JCM 14624]
gi|445659864|gb|ELZ12666.1| signal transduction protein with CBS domains [Halovivax asiaticus
JCM 14624]
Length = 269
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 39/161 (24%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-RITGFPVIDDDWKLVGVVSDYDL 127
R VG++MT+ D+ V TV+E R+ E +G+PV D ++ G VS DL
Sbjct: 6 RGSKPQVGEYMTQ--DVATVAPEATVEEVAVRIAESDNHSGYPVCDR-RRVEGFVSARDL 62
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L D +G+ + +M+ +V H +
Sbjct: 63 LLAD---------------------------------DGEPIWKVMSTNLIVAHPEMKVT 89
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
DAAR++L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 90 DAARVILRSGIQKLPVVDDAGNLVGIISNADVIRS--QIER 128
>gi|222111943|ref|YP_002554207.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221731387|gb|ACM34207.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 226
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
PR VGD MT+ V V++A + L E I PV++D ++VG++ D+
Sbjct: 82 PRQPLSRVGDVMTRGA--LTVAPDQRVNDAWQTLAEHEIAQAPVVNDQGQVVGLLLRADM 139
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
LD L P + + +R +S+ +++P P V +T L
Sbjct: 140 APLD-----------LLPEPGAVKQAIELARRPVSEV-------MVSPVP-TVAADTELR 180
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A +LL+T LPV D G L G I+R +++RA
Sbjct: 181 RVAGVLLDTGLPGLPVTDERGLLAGFISRTDILRA 215
>gi|153872441|ref|ZP_02001333.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
gi|152071093|gb|EDN68667.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
Length = 155
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 20/150 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
TV + M++ +L+ +K TV EA + ++ ++I PVID+ +L+G++S D+LA SI
Sbjct: 3 TVKELMSR--ELYTLKPDDTVHEARQLMLSQQIRHIPVIDEQEQLIGLLSQRDVLA-ASI 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
S +T + S G + +MT ++ E+T+L +A + +
Sbjct: 60 STLADLETQEREELES----------------GIPINKIMTTNVVIAEEDTSLLNATQFM 103
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
L K LPV+ G +L+G++T + V+ A
Sbjct: 104 LSQKQGCLPVLRG-KQLIGILTETDFVKLA 132
>gi|253701619|ref|YP_003022808.1| hypothetical protein GM21_3021 [Geobacter sp. M21]
gi|251776469|gb|ACT19050.1| CBS domain containing membrane protein [Geobacter sp. M21]
Length = 149
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D MTK ++ V+ TTV + + + RI+ PV+DD LVG+VS+ DL+
Sbjct: 6 DIMTK--EVITVRRDTTVRDLAQLFAQHRISTVPVVDDQGLLVGIVSESDLI-------- 55
Query: 137 NQNDTSLFPNVNST--WKTFNE----LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAA 190
Q+ P V S W + E ++ L K + VG++ V + + + A
Sbjct: 56 EQDKNLHIPTVVSIFDWVIYLESDKRFEKELQKMTAQTVGEIYAEEVFSVGPESPVSEVA 115
Query: 191 RLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
++ + + +PVV+G ++VG+I R ++VR +
Sbjct: 116 DIMTSKRIQAVPVVEGR-RVVGIIGRIDMVRTMI 148
>gi|448415704|ref|ZP_21578359.1| cbs-domain-containing membrane protein [Halosarcina pallida JCM
14848]
gi|445680405|gb|ELZ32852.1| cbs-domain-containing membrane protein [Halosarcina pallida JCM
14848]
Length = 169
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS--------G 135
D+ V V E L RL GFPV+D+ +VG+V+ +DL+ L G
Sbjct: 12 DVKTVAPDDDVSEVLGRLARADFNGFPVVDEGGAVVGIVTQHDLVELFQTKERTLWIPVG 71
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL- 194
+L V+ +W + L L+K + + ++MT + V + +L+ LL
Sbjct: 72 LPPFTETLTYAVDVSWDDLD-LGVDLAKNADRPISEVMTTDVVTVGPDADLDTVLDLLSG 130
Query: 195 -ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ RLPVV+ G+LVG++ R +VVRA ++RD +
Sbjct: 131 DDRDINRLPVVED-GRLVGIVARQDVVRAVRDLRRDAD 167
>gi|197123713|ref|YP_002135664.1| hypothetical protein AnaeK_3318 [Anaeromyxobacter sp. K]
gi|196173562|gb|ACG74535.1| protein of unknown function DUF190 [Anaeromyxobacter sp. K]
Length = 436
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 10/150 (6%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
T V D M++ D+ V +T V E +E + K PV++D + VG+V+ DL+
Sbjct: 118 TAVVADVMSR--DVVTVARSTPVREVVELTLGKTYRAVPVVED-GRPVGIVTSSDLVH-- 172
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
GG L ++ EL L++ + D+MTP P+ V + +L AA
Sbjct: 173 --RGGLGVRLDLLARLDK--PALQELLERLTQQR-RTAADVMTPDPVTVSSSASLPAAAE 227
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
L++ + +RLPVVD G LVG+++R +++R
Sbjct: 228 LMVRGRLKRLPVVDHAGSLVGIVSRVDLLR 257
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 59 GVGITNSVPPRNGTYTVGD---FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD 115
G+G P VGD + D+ AV+ T++ E + + R+ V+D++
Sbjct: 260 GIGYGKKEPVARELGLVGDQPLSRVMRRDVPAVRPDTSLPEVFQAVTSTRLNRALVLDEE 319
Query: 116 WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTP 175
+ VG+V+D +LL + + +L + ++ + + T G+ D+M+
Sbjct: 320 RRPVGLVTDAELLERVTPALRPGAIRALMQRL--PFRHAKGEESAAAHTRGRTAADVMSR 377
Query: 176 APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
V E+ L +A +L + + L V D G++VG++ R +++
Sbjct: 378 HVATVREDVLLSEAIASMLRGEDKVLAVTDAEGRVVGIVDRADLL 422
>gi|421591912|ref|ZP_16036684.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
gi|403702494|gb|EJZ19048.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
Length = 219
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
++ +V A+ +++ ++G PV+DD ++ G+V++ DLL + + L P
Sbjct: 7 SISPAVSVRHAVAIMLQNHVSGLPVVDDQERVCGLVTEGDLLL--------RREVRLAPR 58
Query: 147 VNSTWKTFNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
+ +E L+R + +NG V D+M+ +V ++ + D A L + +RLP+V
Sbjct: 59 SARAPELISEIDLERYIC-SNGWCVADVMSRDVIVARPDSEVSDIAESLQVHRIKRLPIV 117
Query: 205 DGYGKLVGLITRGNVVR 221
+ +LVG+++R +++R
Sbjct: 118 E-EERLVGIVSRRDILR 133
>gi|344173267|emb|CCA88419.1| conserved hypothetical protein (cystathionine-beta-synthase-CBS
domain) [Ralstonia syzygii R24]
Length = 378
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
V T+V AL L + PV+DD+ +L+G+V+ DL T P
Sbjct: 248 VSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTRADL-------------TGTAPRA 294
Query: 148 NSTWKTFNELQRL-----LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
QRL + VG +MTP L + + + D + + +P
Sbjct: 295 RR--------QRLRDWFAIGAMTPPRVGGVMTPRVLTIRADAPMADLVPMFASAGHHHIP 346
Query: 203 VVDGYGKLVGLITRGNVVRA 222
VVD +G+L G++T+ +++ A
Sbjct: 347 VVDAHGRLAGILTQADIIHA 366
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 158 QRLLSKT-NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
Q+ ++T + ++MTP+ + V T++ A RLL + LPV+D +L+G++TR
Sbjct: 225 QQAYARTFHALTCANIMTPSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVTR 284
Query: 217 GNVVRAALQIKRDGER 232
++ A + +R R
Sbjct: 285 ADLTGTAPRARRQRLR 300
>gi|284162218|ref|YP_003400841.1| chloride channel core [Archaeoglobus profundus DSM 5631]
gi|284012215|gb|ADB58168.1| Chloride channel core [Archaeoglobus profundus DSM 5631]
Length = 587
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 37/156 (23%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKR-ITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT+ D+ V TV E RL+E+ GFPV++D KL+G++
Sbjct: 462 VKDAMTR--DVMTVTPDQTVGEVF-RLIERTGHMGFPVLEDG-KLIGII----------- 506
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRL-LSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
TF +++R+ L + V D+MTP P+ + +L+ A
Sbjct: 507 -------------------TFEDIERVPLEERTKTKVRDVMTPNPITASPDDDLKSALEK 547
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
++ RLPVV+ G+LVG+IT+G++++A ++IKR
Sbjct: 548 MVIRGVGRLPVVEN-GRLVGIITKGDIIKAYVRIKR 582
>gi|24380042|ref|NP_721997.1| acetoin utilization protein, acetoin dehydrogenase [Streptococcus
mutans UA159]
gi|449865163|ref|ZP_21778824.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans U2B]
gi|449872303|ref|ZP_21781442.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans 8ID3]
gi|449902349|ref|ZP_21791536.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans M230]
gi|449984198|ref|ZP_21818884.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans NFSM2]
gi|450081445|ref|ZP_21851728.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans N66]
gi|24378033|gb|AAN59303.1|AE014996_6 putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans UA159]
gi|449154556|gb|EMB58129.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans 8ID3]
gi|449180449|gb|EMB82606.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans NFSM2]
gi|449215250|gb|EMC15457.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans N66]
gi|449262875|gb|EMC60314.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans M230]
gi|449264426|gb|EMC61768.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus mutans U2B]
Length = 219
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT++ + + TTV +A + + EK + PVI++D LVG LL +I+
Sbjct: 3 VKDFMTRR--VVYISPDTTVAKATDIMREKNLRRLPVIENDV-LVG------LLTEGTIA 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +T + E+ LL+KT + D+M + V ++ LEDA +++
Sbjct: 54 DANPS--------KATSLSIYEMNYLLNKTKAR---DVMIKDVITVSKDDRLEDAIYIMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVDG ++ G+IT +V RA L++
Sbjct: 103 KHKIGVLPVVDG-NQMSGIITDKDVFRAFLEV 133
>gi|397775005|ref|YP_006542551.1| CBS domain containing protein [Natrinema sp. J7-2]
gi|448343833|ref|ZP_21532750.1| CBS domain containing protein [Natrinema gari JCM 14663]
gi|397684098|gb|AFO58475.1| CBS domain containing protein [Natrinema sp. J7-2]
gi|445621916|gb|ELY75381.1| CBS domain containing protein [Natrinema gari JCM 14663]
Length = 275
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 39/156 (25%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TV D+MT+ D+ V TV + R+ E ++ +GFPV D ++ G +S DLL
Sbjct: 11 TVKDYMTR--DVATVSPDETVGQVATRIAESEQHSGFPVCDR-RRVEGFISARDLLL--- 64
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
++D +F +M LV H + + DAAR+
Sbjct: 65 ----AEDDDPIFK--------------------------VMATELLVAHPDMKVNDAARV 94
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 95 ILRSGIQKLPVVDDAGNLVGIISNADVIRS--QIER 128
>gi|410694908|ref|YP_003625530.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
gi|294341333|emb|CAZ89748.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
Length = 159
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+ T V E L+E RI G PV D L+G+V++ DL+ D L P
Sbjct: 14 IAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLV-------HRAADERLEPR- 65
Query: 148 NSTWK------TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
S WK F K G+ +MT L V ++N+ AARLL + + L
Sbjct: 66 ESLWKENFYRSVFRRHTPEPDKAEGRTAEQVMTREVLTVAPDSNVTVAARLLADHNIKSL 125
Query: 202 PVVDGYGKLVGLITRGNVVR 221
PV++ + +LVG+I+R ++V+
Sbjct: 126 PVIE-HERLVGMISRFDLVK 144
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
V DLMTP P+ + T + + AR+L+E + +PV D G L+G++T G++V A
Sbjct: 3 VRDLMTPNPIRIAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLVHRA 57
>gi|259048099|ref|ZP_05738500.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
gi|259035160|gb|EEW36415.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
Length = 213
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 20/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+M+ ++ V TTV +AL+ + E I PV++D KLVG++++ +L+A S S
Sbjct: 3 VKDYMST--NVITVTPETTVMKALDLMKEHDIHRLPVVED-GKLVGLLTE-ELVAGHSPS 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
TSL + +EL LL+KT ++M L V +T LE+AA L+
Sbjct: 59 MA----TSL---------SMHELNYLLNKTTA---SEIMQKQVLTVKAHTLLEEAASLMR 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
+ K LPVVD G + G+IT ++ A ++I
Sbjct: 103 QQKVGVLPVVDARGHVEGIITDKDIFDAFIEI 134
>gi|334706234|ref|ZP_08522100.1| CBS domain-containing protein [Aeromonas caviae Ae398]
Length = 124
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 28/138 (20%)
Query: 86 HAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTSLF 144
H++ + EAL+RL + G PV+DD LVG +S+ D + AL ++G DT
Sbjct: 3 HSLHPGLGLAEALDRLHRANLGGLPVLDDHQHLVGFLSEQDCIPAL--LTGSYHCDTR-- 58
Query: 145 PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVV 204
+V DLM+ PL V + N+ D AR + + + PV+
Sbjct: 59 ----------------------TLVEDLMSRTPLFVSPDDNIVDLARQMAGARPKVYPVM 96
Query: 205 DGYGKLVGLITRGNVVRA 222
+G GK+ G+I+R V++A
Sbjct: 97 EG-GKVTGIISRRQVMQA 113
>gi|39937301|ref|NP_949577.1| hypothetical protein RPA4241 [Rhodopseudomonas palustris CGA009]
gi|192293081|ref|YP_001993686.1| hypothetical protein Rpal_4720 [Rhodopseudomonas palustris TIE-1]
gi|39651159|emb|CAE29682.1| CBS domain [Rhodopseudomonas palustris CGA009]
gi|192286830|gb|ACF03211.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
TIE-1]
Length = 130
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 23/139 (16%)
Query: 87 AVKTTT---TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
AVK+ + T+ E ++ +PV++D +++G+V+ YD L+ + + T +
Sbjct: 4 AVKSVSRELTMRELEDKFEHDDFNAYPVVED-QRVIGMVTKYDFLSCFAF-----HPTQM 57
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
P+ + L++++ VGD+M+ L VH +T L +L++E + R +PV
Sbjct: 58 LPHYDD----------LMNRS----VGDIMSGDFLYVHSDTKLTRVLQLMVEHQTRSIPV 103
Query: 204 VDGYGKLVGLITRGNVVRA 222
+D KL G+I+R +V++A
Sbjct: 104 LDADRKLDGIISREDVIKA 122
>gi|322385954|ref|ZP_08059594.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|417922506|ref|ZP_12565994.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|321269937|gb|EFX52857.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|342832603|gb|EGU66898.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
Length = 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TT+ A + + ++++ PVI++D KLVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADIMRDQKLHRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT V D+M + + + +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIHDVVTISQYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD ++ G+IT ++ +A L++ GE+
Sbjct: 103 KNKIGILPVVDN-EQVYGIITDRDIFKAFLEVSGYGEK 139
>gi|448337881|ref|ZP_21526954.1| CBS domain containing protein [Natrinema pallidum DSM 3751]
gi|448344754|ref|ZP_21533656.1| CBS domain containing protein [Natrinema altunense JCM 12890]
gi|445624841|gb|ELY78214.1| CBS domain containing protein [Natrinema pallidum DSM 3751]
gi|445636860|gb|ELY90017.1| CBS domain containing protein [Natrinema altunense JCM 12890]
Length = 275
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 39/156 (25%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVE-KRITGFPVIDDDWKLVGVVSDYDLLALDS 132
TV D+MT+ D+ V TV + R+ E ++ +GFPV D ++ G +S DLL
Sbjct: 11 TVKDYMTR--DVATVSPDETVGQVATRIAESEQHSGFPVCDR-RRVEGFISARDLLL--- 64
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
++D +F +M LV H + + DAAR+
Sbjct: 65 ----AEDDDPIFK--------------------------VMATELLVAHPDMKVNDAARV 94
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228
+L + ++LPVVD G LVG+I+ +V+R+ QI+R
Sbjct: 95 ILRSGIQKLPVVDDAGNLVGIISNADVIRS--QIER 128
>gi|392410019|ref|YP_006446626.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390623155|gb|AFM24362.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 233
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 18/145 (12%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDT 141
++D+ + ++ +A+ + E ++ PV+ + +L+GVV+D DL + T
Sbjct: 8 RKDVPTIDVNASMQDAMVCMKEHKVALLPVMQKN-QLIGVVTDRDLK-----RASASDAT 61
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
SL +EL LLS+ V D+M+ P+ + + LE+AA +LL+ +
Sbjct: 62 SL---------DIHELIYLLSRIK---VSDIMSRKPVTLAPDLTLEEAASILLKNNFSGA 109
Query: 202 PVVDGYGKLVGLITRGNVVRAALQI 226
PV++G GK++GLI+ + +A + +
Sbjct: 110 PVINGDGKVIGLISNHELFQALISL 134
>gi|392392580|ref|YP_006429182.1| signal transduction protein [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523658|gb|AFL99388.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfitobacterium dehalogenans ATCC 51507]
Length = 149
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D M K ++ + T + E + L + I+G PV+D L+G+VS+ DLL + +
Sbjct: 3 VQDIM--KTNVITISPNTEIREIAKLLCDHHISGVPVLDFFGNLIGIVSEGDLLHKE--T 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ F ++ + + L K ++MT + ++++ +E+AA L++
Sbjct: 59 NPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTQEVITLNKDATIEEAASLMI 118
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ +RLP+++ GK++G+I+R +V++ ++
Sbjct: 119 KHNVKRLPIMED-GKMIGIISRKDVIKVLIE 148
>gi|18976657|ref|NP_578014.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|397650783|ref|YP_006491364.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|1170554|sp|P42851.1|IMDH_PYRFU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|595287|gb|AAC44532.1| IMP dehydrogenase [Pyrococcus furiosus]
gi|18892229|gb|AAL80409.1| inosine-5'-monophosphate dehydrogenase (imp dehydrogenase)
[Pyrococcus furiosus DSM 3638]
gi|393188374|gb|AFN03072.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 485
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 35/138 (25%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+ + T+D AL + + I G PV+++D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAARE----------- 148
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
G+ V +LMT + V E+ ++E+A ++++E + RLP
Sbjct: 149 -----------------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLP 185
Query: 203 VVDGYGKLVGLITRGNVV 220
VV+ GKLVGLIT ++V
Sbjct: 186 VVNEDGKLVGLITMSDLV 203
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 59 GVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKL 118
G+ + R G TV + MT+ ++ V + V+EAL+ ++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREGR-TVKELMTR--EVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 119 VGVVSDYDLLA 129
VG+++ DL+A
Sbjct: 194 VGLITMSDLVA 204
>gi|56421343|ref|YP_148661.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
gi|375009929|ref|YP_004983562.1| acetoin utilization protein [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448239087|ref|YP_007403145.1| acetoin utilization protein [Geobacillus sp. GHH01]
gi|56381185|dbj|BAD77093.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
gi|359288778|gb|AEV20462.1| Acetoin utilization protein [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207929|gb|AGE23394.1| acetoin utilization protein [Geobacillus sp. GHH01]
Length = 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 22/139 (15%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
++ T T+ EAL+ L RI PV+D++ +L+G+V+ DL D S P++
Sbjct: 14 LRATNTIAEALQLLRHHRIRHLPVVDEEGRLLGLVTSQDL-----------RDAS--PSI 60
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ +LQ K V +M +V H +E+ A L E + LP+V+ +
Sbjct: 61 FHLHEHLEDLQ--------KPVSTIMKTDLIVGHPLDFVEEVAALFYEHRIGCLPIVN-H 111
Query: 208 GKLVGLITRGNVVRAALQI 226
GKLVG+IT+ +++R +++
Sbjct: 112 GKLVGIITQTDLLRTFIEL 130
>gi|288561286|ref|YP_003424772.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
gi|288543996|gb|ADC47880.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
Length = 283
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 40/160 (25%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MTK ++ V+ + ++ + + E + G+PV+D++ +VG+++ YDLL D
Sbjct: 13 VRDYMTK--NVITVRYDSLNNDVIALMKETKHDGYPVVDEEGHIVGIITAYDLLLKD--- 67
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
W+T + V +M+ +V E+ ++ DA+R++
Sbjct: 68 ----------------WET-------------EYVKSIMSQEVIVAREDMHINDASRVMF 98
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
RLPVVD + G++T ++VR+ + ERST
Sbjct: 99 RHGISRLPVVDKERHVKGIMTNTDIVRSHI------ERST 132
>gi|320159747|ref|YP_004172971.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
gi|319993600|dbj|BAJ62371.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
Length = 427
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL 127
P V + MT+ D+ + V +A ++++E + PV+D + ++VG+++ DL
Sbjct: 116 PLPAERLVREVMTR--DVVHLMPEMNVRQAWQKMLESGVKAMPVVDSERRVVGILTSEDL 173
Query: 128 LALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L I L V E RLLS + V D+MT + E+ +L
Sbjct: 174 LERGVIR------QRLSVAVRLDEAEIQEELRLLS-ASPLTVKDVMTQPVITAREDEHLG 226
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+A R +++ +R+PVV+ +LVG+++R +++R
Sbjct: 227 NAVRRMIDKGLKRMPVVNAGNQLVGMLSRLDILR 260
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
R TVG+ M + DL ++ T +D LE+ V+D+ K VGV+SD D++
Sbjct: 276 RGAVRTVGEVM--RTDLPVIRLTERLDTLLEKFAACDSNRLLVVDEQNKPVGVISDSDVV 333
Query: 129 ALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG-DLMTPAPLVVHENTNLE 187
+ + L+RL S KV DL +P L V + +
Sbjct: 334 V--RVEAAQRKGI------------LQALRRLTSPPPLKVTAEDLYSPGVLTVPTDAPIA 379
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A + +L + L VVD G L+G++ R +++ A
Sbjct: 380 SAVQTMLAEGRKVLAVVDKQGTLLGIVDRQSLLEA 414
>gi|313672827|ref|YP_004050938.1| CBS domain-containing membrane protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939583|gb|ADR18775.1| CBS domain containing membrane protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 136
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Query: 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL-ALDSISGGNQNDTSLFPNVNSTW 151
++ E RL EK+ITG PV++D+ ++VGV S+ DLL L I ND P V+
Sbjct: 19 SIREVTLRLREKKITGVPVLNDNGEVVGVFSETDLLNRLPDI----LNDADKIPLVDVKE 74
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
T ++ ++S +PA + V +T+++D A++ L R+PV++G KLV
Sbjct: 75 LTDPPVKTVMS-----------SPA-ITVTPDTDIKDVAKIFLYKYIHRVPVLEG-DKLV 121
Query: 212 GLITRGNVVRA 222
G+++ G++++A
Sbjct: 122 GIVSLGDLLKA 132
>gi|409438980|ref|ZP_11266043.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408749640|emb|CCM77221.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 78/142 (54%), Gaps = 17/142 (11%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG----GNQN 139
D+ + ++V +A++ +V K I+G PVID+D L G++++ DL+ G GN +
Sbjct: 10 DITTISADSSVYQAIDLMVAKEISGLPVIDNDGNLCGLLTEGDLMRRIEFGGGRSAGNPD 69
Query: 140 DTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
TSL F++ R + V D+M+ + + V +T + A ++ + + +
Sbjct: 70 KTSLVD--------FDDYIR----SRSWRVSDIMSTSVISVTLDTPVAAVAEVMFQNRIK 117
Query: 200 RLPVVDGYGKLVGLITRGNVVR 221
R+PVV G +L+G+++R ++++
Sbjct: 118 RVPVVSGK-RLLGIVSRIDLLK 138
>gi|386390886|ref|ZP_10075667.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
gi|385731764|gb|EIG51962.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
Length = 220
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D+M+K K T++ +A + + E PV+DD+ +L G+VSD D+
Sbjct: 3 IKDWMSKSP--VTAKPGTSIMKAAKLMKENGFHRLPVVDDNDRLAGIVSDRDI------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ V D+MT + + + +E AA L+L
Sbjct: 54 ------KEASPS-KATTLDMHELYYLLSEIK---VADIMTKKVIFIGPDDTVEKAAVLML 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
LPVVDG K+VG+IT ++ + + I
Sbjct: 104 RNNVSGLPVVDGDSKVVGVITDSDIFKVLVNI 135
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ D M+ +P+ T++ AA+L+ E + RLPVVD +L G+++ ++ A+
Sbjct: 2 LIKDWMSKSPVTAKPGTSIMKAAKLMKENGFHRLPVVDDNDRLAGIVSDRDIKEAS 57
>gi|374635803|ref|ZP_09707394.1| CBS domain containing protein [Methanotorris formicicus Mc-S-70]
gi|373561124|gb|EHP87367.1| CBS domain containing protein [Methanotorris formicicus Mc-S-70]
Length = 264
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 38/153 (24%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V ++MTKK D + TV +A+ + E FPV+ D KLVG+VS +DL+ D
Sbjct: 4 VSEYMTKKVD--CLSPNNTVKDAIRFVKETGHDAFPVVVD-GKLVGIVSVHDLVGKDE-- 58
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAP--LVVHENTNLEDAARL 192
+ VG++MT +V + N+ D RL
Sbjct: 59 -------------------------------DEKVGNIMTKREDMIVAKPDANIMDVGRL 87
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ T + +LPVVD LVG+IT +V+R+ ++
Sbjct: 88 MFRTGFSKLPVVDDENNLVGIITNTDVIRSQIE 120
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG+ MTK+ED+ K + + + + PV+DD+ LVG++++ D++
Sbjct: 62 VGNIMTKREDMIVAKPDANIMDVGRLMFRTGFSKLPVVDDENNLVGIITNTDVIR----- 116
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHEN 183
+Q + + +N KT+ L G V D + P VHE+
Sbjct: 117 --SQIEKTTPEKLNKIVKTYENLGLKTRVERGYVPIDELKPTQSKVHED 163
>gi|386586288|ref|YP_006082690.1| putative signal transduction protein [Streptococcus suis D12]
gi|353738434|gb|AER19442.1| putative signal transduction protein with CBS domains
[Streptococcus suis D12]
gi|451937306|gb|AGF87609.1| CBS family protein [Streptococcus phage phiD12]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 21/159 (13%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V DFMT+K + + TT+ A + + E+ + PVI++D KLVG+V++
Sbjct: 2 SVKDFMTRK--VVYISPDTTIAHAADIMREQYLHRLPVIEND-KLVGLVTE--------- 49
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + S P+ +T + E+ LL+KT V D+M + V +LEDA L+
Sbjct: 50 --GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDATYLM 101
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD G+L G+IT ++ A L + GE
Sbjct: 102 YKNKVGILPVVDN-GQLYGVITDRDIFAAFLHVSGYGEE 139
>gi|392407165|ref|YP_006443773.1| contains C-terminal CBS domains [Anaerobaculum mobile DSM 13181]
gi|390620301|gb|AFM21448.1| putative transcriptional regulator, contains C-terminal CBS domains
[Anaerobaculum mobile DSM 13181]
Length = 154
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M K DL A+ + +A++ ++TG PVI+ +W LVG +S+ D++ +
Sbjct: 7 DIMQK--DLTALSKEDFIVDAVKMFYIHKVTGVPVIEGNWCLVGFISESDIIKAALPTYL 64
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
+S F + F+++ + + V D MT + V + +L A L++
Sbjct: 65 ETITSSAFLDKEGELGLFDKIHGI----GFRKVEDFMTKEVIYVEPSASLMSVADLMIRK 120
Query: 197 KYRRLPVVDGYGKLVGLITR 216
+ +RLPVV GKL+G+I R
Sbjct: 121 RIKRLPVVQN-GKLMGIIDR 139
>gi|78184351|ref|YP_376786.1| CBS [Synechococcus sp. CC9902]
gi|78168645|gb|ABB25742.1| CBS [Synechococcus sp. CC9902]
Length = 157
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS- 132
TV D MTK + V+ T + EA++ + + ++G PV+D+ L+G +S+ DL+ +S
Sbjct: 6 TVADVMTKP--VLTVRADTPLQEAVKLISDHHVSGLPVVDEQGALIGELSEKDLMVRESG 63
Query: 133 ISGGNQN---DTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDA 189
+ G D+ ++ W ++ ++L G VG+LM +L A
Sbjct: 64 VDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GTTVGELMQKNSHSCDGTLDLPKA 117
Query: 190 ARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
A +L +RL V+D +G++TRG+VVRA
Sbjct: 118 ASMLHNKGTQRLFVLDNEKNPIGVLTRGDVVRA 150
>gi|15679286|ref|NP_276403.1| inosine-5'-monophosphate dehydrogenase-like protein VI
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622389|gb|AAB85764.1| inosine-5'-monophosphate dehydrogenase related protein VI
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 269
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 42/160 (26%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MT+ D+ V + T+ E ++ + E GFPV D+ ++G+V+ +DLL
Sbjct: 7 VRDYMTR--DVITVSSDTSTAEIIKLMKETGHDGFPV-KDNGSVIGMVTAFDLL------ 57
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
+ P V K V ++M+ +V ++ +L DAAR++
Sbjct: 58 --------IKPWV-------------------KTVSEIMSRDVVVADQDMSLNDAARVMF 90
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGERST 234
RLPV++ GKLVG+IT ++VR+ + ERST
Sbjct: 91 RMGISRLPVINKEGKLVGIITNTDIVRSHI------ERST 124
>gi|421487791|ref|ZP_15935189.1| CBS domain protein [Streptococcus oralis SK304]
gi|400369753|gb|EJP22750.1| CBS domain protein [Streptococcus oralis SK304]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD + ++ G+IT +V RA L+I GE
Sbjct: 103 KNKIGILPVVDNH-QVYGVITDRDVFRAFLEIAGYGEE 139
>gi|296269624|ref|YP_003652256.1| hypothetical protein Tbis_1649 [Thermobispora bispora DSM 43833]
gi|296092411|gb|ADG88363.1| CBS domain containing membrane protein [Thermobispora bispora DSM
43833]
Length = 234
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D MT + + +V +T + E L+ ++ PV+D + ++GVVS+ DLL + +
Sbjct: 5 VRDVMTTQ--VASVNGSTPFRDIAEVLITHNVSAAPVVDGEGHVIGVVSEADLLRKEELR 62
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKV--------VGDLMTPAPLVVHENTNL 186
+ P L+ L + G V LMT P+ + ++
Sbjct: 63 EQYYREGYKLP-------LSARLRERLGRPGGDVEEKARALTAAQLMTAPPITITPYKSV 115
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
AARL+ + +RLPVVD G+LVG+++R ++++ ++ D
Sbjct: 116 VSAARLMSKHGVKRLPVVDDEGRLVGIVSRHDLLKVFVRSDED 158
>gi|315655909|ref|ZP_07908807.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
gi|315489973|gb|EFU79600.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
Length = 212
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+ + TV +A+E + IT PV+ D KL GVVS DL P+
Sbjct: 14 IDSGATVPDAIELMQAHGITKLPVLHD-GKLCGVVSQLDL-------------NRALPS- 58
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
++T +F E+ LLSK + +M P + + LE+AA L+ +TK LPV+D
Sbjct: 59 DATSLSFGEVAYLLSKLK---IYKIMQKNPPTIAPDAMLEEAAILMRDTKVEILPVLD-E 114
Query: 208 GKLVGLITRGNVVRAALQI 226
GK+VG+IT +V+ A + I
Sbjct: 115 GKVVGVITESDVLDAFIDI 133
>gi|46581178|ref|YP_011986.1| hypothetical protein DVU2774 [Desulfovibrio vulgaris str.
Hildenborough]
gi|387154408|ref|YP_005703344.1| hypothetical protein Deval_2564 [Desulfovibrio vulgaris RCH1]
gi|46450599|gb|AAS97246.1| CBS domain protein/ACT domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234852|gb|ADP87706.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
RCH1]
Length = 227
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ ++MT+ ++ V T++ +A + + E PV+D + KL+G+VSD D+
Sbjct: 3 IREWMTR--NVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDI------- 53
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T +EL LLS+ V D+MT P+ V + +E A L++
Sbjct: 54 ------KEASPSKATTLD-MHELYYLLSEIK---VKDIMTRDPICVQPDETVERVALLMI 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
E +PVVD G+LVG+IT ++ + + I
Sbjct: 104 EKHIGGMPVVDEEGQLVGIITDSDIFKVLIAI 135
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
++ + MT + V +T++ A++L+ E +RRLPV+DG GKL+G+++ ++ A+
Sbjct: 2 LIREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEAS 57
>gi|358446514|ref|ZP_09157060.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
gi|356607688|emb|CCE55400.1| putative uncharacterized protein [Corynebacterium casei UCMA 3821]
Length = 366
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 7/158 (4%)
Query: 67 PPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYD 126
P T TV M K D++ +K+ +TV EAL + I+G P++D D +LVG +SD D
Sbjct: 202 PQVESTGTVAGLM--KTDVYRIKSESTVLEALYKFTSLGISGAPIVDQDNRLVGFISDGD 259
Query: 127 LLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNL 186
+ L +S + + +++ K + + L + N V L T + + +
Sbjct: 260 I--LRYLSAAHPSSANIYSFAIGADKDLEQAMQELGQLN---VMSLATKDVISLPHTATV 314
Query: 187 EDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
DA L + ++ PV + G +VG+++R + R A+
Sbjct: 315 ADAVAALSDANLKKAPVTNDQGHMVGIVSRSAINRLAI 352
>gi|294633519|ref|ZP_06712078.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831300|gb|EFF89650.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 217
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 74 TVGDFMTKKEDLHAV---KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130
TV D MT HAV + T+ + + L + ++ PV+DD + VG+VS+ DLL
Sbjct: 5 TVEDLMT-----HAVVRVRRDTSFKDLVRTLADNGVSAVPVVDDLGRPVGLVSEADLL-- 57
Query: 131 DSISGGNQNDTSLF--PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLED 188
G + L P + +E G+LMT P+ ++ +
Sbjct: 58 -RTVAGRPDPAGLLAEPRRDGVLGQASE---------EATAGELMTAPPVCARPGWSVVE 107
Query: 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
AAR + +RLPVVD G LVG+++R +++R L+
Sbjct: 108 AARTMDAHTVKRLPVVDETGVLVGIVSRADLLRVFLR 144
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
+ V DLMT A + V +T+ +D R L + +PVVD G+ VGL++ +++R
Sbjct: 4 RTVEDLMTHAVVRVRRDTSFKDLVRTLADNGVSAVPVVDDLGRPVGLVSEADLLR 58
>gi|294496136|ref|YP_003542629.1| hypothetical protein Mmah_1488 [Methanohalophilus mahii DSM 5219]
gi|292667135|gb|ADE36984.1| CBS domain containing protein [Methanohalophilus mahii DSM 5219]
Length = 285
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
D+ A + DE L L +K+++G PV+ D+ ++VG+VS
Sbjct: 14 DVAAATLPGSRDEVLNILKDKKVSGVPVLKDN-RVVGIVS-------------------- 52
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
LLS + + LMT PL + N++ AA+ L+E +RRLPV
Sbjct: 53 -------------RSNLLSNPEEEQIALLMTRDPLKIKPEDNIKKAAQYLMEYGFRRLPV 99
Query: 204 VDGYGKLVGLITRGNVVRAALQIKRD 229
VD KL G+IT ++V + ++ D
Sbjct: 100 VDDDDKLEGMITVADIVASMASLQLD 125
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 106 ITGFPVIDDDWKLVGVVSDYDL---------LALDSISGGNQNDTSLFPNVNSTWKTFNE 156
I P+++ + LVG++SD D+ L + +S G+ +D + ++ T +
Sbjct: 158 IKAVPILNSELDLVGIISDRDIISASVIEDSLEMSDMSAGSGDDEWTWESMRDTLSIYYS 217
Query: 157 LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITR 216
+ R+ K V ++M + N ++ + A + + ++PVVD G +GL+
Sbjct: 218 VSRI--KVPDVPVKEVMVTDLIKASSNMSVSECALKMKRNRVDQVPVVDANGTFIGLLRD 275
Query: 217 GNVVRAAL 224
+++A +
Sbjct: 276 RYLMKALI 283
>gi|448543813|ref|ZP_21625274.1| SpoIVFB-type metallopeptidase [Haloferax sp. ATCC BAA-646]
gi|448550886|ref|ZP_21629115.1| SpoIVFB-type metallopeptidase [Haloferax sp. ATCC BAA-645]
gi|448558797|ref|ZP_21633210.1| SpoIVFB-type metallopeptidase [Haloferax sp. ATCC BAA-644]
gi|445705955|gb|ELZ57842.1| SpoIVFB-type metallopeptidase [Haloferax sp. ATCC BAA-646]
gi|445710831|gb|ELZ62627.1| SpoIVFB-type metallopeptidase [Haloferax sp. ATCC BAA-645]
gi|445712030|gb|ELZ63815.1| SpoIVFB-type metallopeptidase [Haloferax sp. ATCC BAA-644]
Length = 390
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +++L V T+V E LER+ +R TG+PV+ + LVG+V+ LD
Sbjct: 248 VVRDIMTGRDNLDVVDEKTSVAELLERMFVERHTGYPVLRNG-DLVGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELATITPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRA 222
E RLPVVD G+LVGL++R ++V A
Sbjct: 338 QERGVGRLPVVDEAGELVGLVSRSDLVTA 366
>gi|448611074|ref|ZP_21661708.1| metalloprotease [Haloferax mucosum ATCC BAA-1512]
gi|445743506|gb|ELZ94987.1| metalloprotease [Haloferax mucosum ATCC BAA-1512]
Length = 390
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 30/157 (19%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
V D MT +++L V+ T+V E LER+ +R TG+PV+ + L+G+V+ LD
Sbjct: 248 VVRDIMTARDNLDVVEERTSVTELLERMFVERHTGYPVLRNG-DLIGMVT------LDDA 300
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G + + F V D+M+ + + + DA L+
Sbjct: 301 RGVKEVERDAFR-----------------------VDDIMSDELTTIDPDADAMDAIALM 337
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230
E RLPVVD G+LVGL++R ++V A I+ G
Sbjct: 338 QERGVGRLPVVDETGELVGLVSRSDLVTAFNIIRSRG 374
>gi|48478187|ref|YP_023893.1| hypothetical protein PTO1115 [Picrophilus torridus DSM 9790]
gi|48430835|gb|AAT43700.1| CBS domain containing protein [Picrophilus torridus DSM 9790]
Length = 281
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 17/119 (14%)
Query: 108 GFPVIDDDWKLVGVVSD---YDLLALDSI----SGGNQNDTSLFPNVNSTWKTF-NELQR 159
FPV+D D G+V+D +D + + S+ G +D + TW N
Sbjct: 157 SFPVLDRDGNFTGLVTDRDIFDKVKMSSVEMLSQAGIADDEDPW-----TWDGIRNVFTY 211
Query: 160 LLSKTNGKV----VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLI 214
++ K+N K+ ++M P+V + N L DA +L+++ Y +LPV+DG+G L G++
Sbjct: 212 IIEKSNVKIPNIPAREIMVKNPVVTYINARLGDAVKLMMQKNYNQLPVLDGHGNLAGML 270
>gi|409387294|ref|ZP_11239534.1| Acetoin utilization acuB protein [Lactococcus raffinolactis 4877]
gi|399205601|emb|CCK20449.1| Acetoin utilization acuB protein [Lactococcus raffinolactis 4877]
Length = 219
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTKK + V TT V +A + + E+ I PVI++D KLVG+V+
Sbjct: 3 VKDFMTKK--VIYVSPTTKVAKAADIMKEQGIHRLPVIEND-KLVGLVT----------- 48
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G S P+V ++ + E+ LL+KT VG++M L + + +LEDA +
Sbjct: 49 AGTIEKAS--PSVATSLSVY-EMNYLLNKTT---VGEVMIREVLTISKYASLEDAVYRMR 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
+ LPVVD + ++ G+IT +V A L+I GE
Sbjct: 103 QNNVGVLPVVD-HDQISGVITDKDVFGAFLKIAGYGE 138
>gi|317484599|ref|ZP_07943503.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
gi|316924139|gb|EFV45321.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
Length = 225
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 22/146 (15%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
++MTK D+ V T++ +A + + + I PV+D +VG+VSD D+ A
Sbjct: 5 EWMTK--DVITVTPDTSMLKASKLMKDHNIRRLPVLDGK-HVVGIVSDRDIRAAS----- 56
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
P+ +T +EL LLS+ V D+MT P+ V+ +T+ DAA LL+E
Sbjct: 57 --------PSKATTLD-MHELYYLLSEVK---VKDIMTSDPVTVY-DTDAVDAAALLMEN 103
Query: 197 K-YRRLPVVDGYGKLVGLITRGNVVR 221
K LPVVDG G+LVG+IT ++ R
Sbjct: 104 KGIGGLPVVDGSGELVGIITDHDIFR 129
>gi|325960187|ref|YP_004291653.1| hypothetical protein Metbo_2468 [Methanobacterium sp. AL-21]
gi|325331619|gb|ADZ10681.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
Length = 126
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 31/140 (22%)
Query: 83 EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTS 142
ED+H T + A +++ + G PV+ D+ KLVG+++ D+L ++GG
Sbjct: 13 EDVHVTSRTDVLAAAKLKMMRCNVGGLPVV-DEGKLVGMITHRDIL----LAGGEA---- 63
Query: 143 LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
T K V DLM+ +V + T + + +++ + Y+R+P
Sbjct: 64 ------LTLK----------------VDDLMSKDLMVADKKTPIVEITKIMADKGYQRIP 101
Query: 203 VVDGYGKLVGLITRGNVVRA 222
V+D +G LVGLIT+ +++RA
Sbjct: 102 VIDDHGDLVGLITQSSLIRA 121
>gi|302336892|ref|YP_003802098.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301634077|gb|ADK79504.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 214
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 18/130 (13%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T V +A+ + ++++ PV+D + KLVG+VS+ DLL P+ ST
Sbjct: 18 TAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYAS-------------PSPASTL 64
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+ E+ LL++ K V MT + V E T +EDAAR++++ LPV+ G LV
Sbjct: 65 SVY-EMSALLARLKVKKV---MTKEVITVTEQTLIEDAARIMVDKNVGGLPVMRD-GLLV 119
Query: 212 GLITRGNVVR 221
G+IT ++ +
Sbjct: 120 GIITESDIFK 129
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 169 VGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
V +MT P + ++T + DA L+ + K RLPV+D KLVG+++ +++ A+
Sbjct: 3 VSRVMTHNPFTISDDTAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYAS 57
>gi|296532012|ref|ZP_06894792.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296267665|gb|EFH13510.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 251
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 69 RNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128
+ V D MT+ + V TT + E+ ++G PV+D+ +L+G+V++ D+
Sbjct: 19 KEDAMQVQDLMTRT--VLTVPPTTPLATLAALFAERGVSGVPVVDEAGRLLGLVTEGDM- 75
Query: 129 ALDSISGGNQNDTSLFPN-VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
L ++ + + + S + E R+ +G+ D+M+ + ++
Sbjct: 76 -LRRLAAPAERPRPWYQRLLASAPRQAEEFARI----HGRCAQDVMSTGLVTAPPEMPVD 130
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
+AA LL + + RRLPV+ G+LVG+++R +++RA L
Sbjct: 131 EAAALLEKHRIRRLPVLR-EGRLVGILSRADLMRAML 166
>gi|401684690|ref|ZP_10816566.1| CBS domain protein [Streptococcus sp. BS35b]
gi|414158169|ref|ZP_11414463.1| hypothetical protein HMPREF9188_00737 [Streptococcus sp. F0441]
gi|400184960|gb|EJO19196.1| CBS domain protein [Streptococcus sp. BS35b]
gi|410870714|gb|EKS18671.1| hypothetical protein HMPREF9188_00737 [Streptococcus sp. F0441]
Length = 218
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 84/158 (53%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + S P+ +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAEAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD + ++ G+IT +V RA L+I GE
Sbjct: 103 KNKIGILPVVDNH-QVYGVITDRDVFRAFLEIAGYGEE 139
>gi|397779242|ref|YP_006543715.1| signal transduction protein [Methanoculleus bourgensis MS2]
gi|396937744|emb|CCJ34999.1| signal transduction protein [Methanoculleus bourgensis MS2]
Length = 164
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ D MT D V+ + V EA L + I G PV+D D ++ G+V++ D+++L +
Sbjct: 5 IKDIMTP--DPVTVRVDSPVREAAGLLRKYHIGGLPVMDGD-RVAGIVTETDIISL--LD 59
Query: 135 GGNQNDTSLFPN----VNSTWKTF---NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLE 187
G+ + P+ + + F + +R L+ + V +M+ + + E +++
Sbjct: 60 VGDLSSDLWLPSPLEVIEVPIREFINWEKTKRALTDISDMEVRRVMSSPVVTIDEESDIV 119
Query: 188 DAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
DAA L+L + RLPV+ GKLVG++TR ++VR
Sbjct: 120 DAASLMLRERIARLPVLRD-GKLVGIVTRADIVRG 153
>gi|334340052|ref|YP_004545032.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334091406|gb|AEG59746.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 151
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 86 HAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFP 145
+ VK + TV +E+ + RI+G PV++D ++V +SD D++ DT F
Sbjct: 12 YKVKESDTVRSVIEKFIAYRISGLPVVNDSNEIVAYISDGDIMRYIGKYNDFVIDTFFFA 71
Query: 146 NV--NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPV 203
V QRLL+ V D+ + V N +E+ A +L + K +++
Sbjct: 72 TVIKGDDEDFLKRAQRLLNLN----VMDIAQRKVIKVAWNEEIENIAAILGKKKIKKVR- 126
Query: 204 VDGYGKLVGLITRGNVVRAALQ 225
V+ G LVG+I+RG+V+R + +
Sbjct: 127 VERNGVLVGIISRGDVIRHSFK 148
>gi|399040053|ref|ZP_10735507.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
gi|398061938|gb|EJL53724.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
Length = 223
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153
V A+ +++ I+G PV+DD+ + G++++ DLL + + L P + +
Sbjct: 20 VRHAVAVMIQNNISGLPVVDDESLVCGMLTEGDLLL--------RREIRLAPRSVRSAEF 71
Query: 154 FNE--LQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+E L+R + ++G V D+M+ +V ++ + D A L + +RLP+V+ G+LV
Sbjct: 72 ISEIDLERYIC-SHGWCVADVMSQDVIVARPDSEVSDIAESLQAHRIKRLPIVED-GRLV 129
Query: 212 GLITRGNVVRAALQ 225
G+++R +++R ++
Sbjct: 130 GIVSRRDILRIIVE 143
>gi|294633516|ref|ZP_06712075.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831297|gb|EFF89647.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 227
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 31/143 (21%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V+ T E L E IT V+DD + VGVVS+ DLL
Sbjct: 7 SVRPGTPFKEIARVLDEYDITAVVVVDDQDRPVGVVSEADLL------------------ 48
Query: 147 VNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG 206
+R S G DLMT +V + AAR + +RLPVVDG
Sbjct: 49 -----------RRQTSGGRGSTARDLMTSPAVVAEPGWHAVRAARTMERHHVKRLPVVDG 97
Query: 207 YGKLVGLITRGNVVRAALQIKRD 229
G+L+G+++R ++VR L ++RD
Sbjct: 98 EGRLIGVVSRSDLVR--LFLRRD 118
>gi|414167219|ref|ZP_11423448.1| hypothetical protein HMPREF9696_01303 [Afipia clevelandensis ATCC
49720]
gi|410891036|gb|EKS38834.1| hypothetical protein HMPREF9696_01303 [Afipia clevelandensis ATCC
49720]
Length = 240
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 78 FMTKKEDLHAVKTT--TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISG 135
MT+K +K T ++ A + +++ ++G PV+D +L+G+V++ DLL I
Sbjct: 6 IMTRK----VIKVTPDDSIAHAAKLMLDNHVSGLPVVDLKGELIGIVTERDLLRRREIGT 61
Query: 136 GNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLE 195
+ L + + +Q T G+ V ++MT V E+T L D ++ +
Sbjct: 62 QRKRPRWLDFILGPGRQAAEYVQ-----TAGRRVDEIMTRDVQTVTEDTPLADVVAIMEK 116
Query: 196 TKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+R+PVV+G KL G+++R N VRA + RD
Sbjct: 117 YHIKRVPVVNGK-KLSGIVSRQNFVRAVAGLARD 149
>gi|384083466|ref|ZP_09994641.1| hypothetical protein gproHI_09146 [gamma proteobacterium HIMB30]
Length = 140
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 29/160 (18%)
Query: 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131
+ V DFMT L K + + ++ L+ + I+G PV+DDD KL+G++S+ D L
Sbjct: 4 SIVVDDFMTTH--LATAKPSMDLLSLVDLLLIQGISGAPVVDDDGKLIGMISEQDCLRA- 60
Query: 132 SISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAAR 191
+ G Q D G VGD+M+ + N+ + A
Sbjct: 61 ILVGTYQGDI------------------------GGRVGDVMSNPVETIQLGENIVEVAE 96
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRA--ALQIKRD 229
++ T RR PVVD G L G I+R +++RA A +I D
Sbjct: 97 RMIRTNRRRFPVVDSDGNLRGQISRRDLLRAVRAYEIPED 136
>gi|220904801|ref|YP_002480113.1| hypothetical protein Ddes_1533 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869100|gb|ACL49435.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 223
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 20/145 (13%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T++ + + L + RI PV+D D +VG+++ DL A F ++T
Sbjct: 18 TSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADLKA--------------FAPQHTTG 63
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
E +L++T V D+M AP+ +H N +E AA+ + + LPV+D KLV
Sbjct: 64 FEILEALDILAETK---VKDVMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLV 120
Query: 212 GLITRGNVVRAALQI---KRDGERS 233
G+IT ++ A L + ++ GE +
Sbjct: 121 GIITGWDIFHALLNMSGAEQGGEEA 145
>gi|317490155|ref|ZP_07948643.1| H+ antiporter-1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325833625|ref|ZP_08166074.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Eggerthella sp. HGA1]
gi|316910649|gb|EFV32270.1| H+ antiporter-1 family protein [Eggerthella sp. 1_3_56FAA]
gi|325485549|gb|EGC88018.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Eggerthella sp. HGA1]
Length = 657
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 43/176 (24%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL---------LALDS 132
K D++ + TV EA++ L+++ I+ P++D+ K VG VSD D+ + +D
Sbjct: 481 KRDVYTLPANATVAEAMQVLMDRHISAAPLVDEQGKAVGFVSDGDIMRYLSKRSQMLMDP 540
Query: 133 I---------SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGK--VVGDLMTPAPLVVH 181
+ GGNQ+ + +EL + +K+ G ++G V
Sbjct: 541 VVMIMQTVDADGGNQDFA----------RKLDELMGMPAKSIGAKGIIG---------VD 581
Query: 182 ENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ---IKRDGERST 234
+ +L + R+L E +++PV+D G++VG+I R ++ ++Q +RD E ++
Sbjct: 582 VHADLPEVCRVLGENHLKKVPVLD-EGQVVGVINRSDITHYSMQQYLAERDAEAAS 636
>gi|197122932|ref|YP_002134883.1| hypothetical protein AnaeK_2529 [Anaeromyxobacter sp. K]
gi|220917724|ref|YP_002493028.1| hypothetical protein A2cp1_2625 [Anaeromyxobacter dehalogenans
2CP-1]
gi|196172781|gb|ACG73754.1| CBS domain containing protein [Anaeromyxobacter sp. K]
gi|219955578|gb|ACL65962.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 146
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V DFMT+ DL V+ + + A L I PV+ + KLVG+++ DLL
Sbjct: 3 SVADFMTR--DLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLLRSGQA 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
D + V ++MT P+ V T L AARL+
Sbjct: 60 GAPAARD--------------------------RAVSEVMTREPVAVRPGTGLAHAARLM 93
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
LE K+ LPV + G LVG++T + VR A + RD
Sbjct: 94 LERKFGCLPVCEDDGLLVGIVTEADFVRFAADVVRD 129
>gi|16263041|ref|NP_435834.1| hypothetical protein SMa1086 [Sinorhizobium meliloti 1021]
gi|433616399|ref|YP_007193194.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
gi|14523696|gb|AAK65246.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|429554646|gb|AGA09595.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
Length = 224
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 77 DFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGG 136
D M K+ + ++ +V A ++E +I+G PV DD +LVG++S+ DLL +
Sbjct: 5 DIMKKR--VLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAELGLV 62
Query: 137 NQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLET 196
++ D V + + F K + VGD+MT + V E+ + A L+
Sbjct: 63 SRRD---IAGVRAKPEAF-------IKGHSWRVGDVMTQPVVTVDEDMPVGRVAELMAAK 112
Query: 197 KYRRLPVVDGYGKLVGLITRGNVVRA 222
+R+PV+ ++VG+I+R +++RA
Sbjct: 113 GIKRIPVMRAE-EMVGIISRSDILRA 137
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 171 DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
D+M L + + ++ AAR +LE + LPV D G+LVG+++ G+++R A
Sbjct: 5 DIMKKRVLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRA 57
>gi|320450872|ref|YP_004202968.1| acetoin utilization AcuB protein [Thermus scotoductus SA-01]
gi|320151041|gb|ADW22419.1| acetoin utilization AcuB protein [Thermus scotoductus SA-01]
Length = 210
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V D+MTK D V T V EA+ L K PV+ D KLVG+V+D DL
Sbjct: 3 VRDWMTK--DPLTVAPDTPVLEAINLLKNKGFRRLPVVKDG-KLVGLVTDKDL------- 52
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
P+ +T + E+ LLS+ V ++M + V + LE AA L+
Sbjct: 53 ------KDAMPSKATTLSVW-EMNYLLSRLT---VQEVMAKPVITVEADAPLEKAALLME 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
E K LPV+DG KLVG+IT +V+RA +++
Sbjct: 103 EKKIGGLPVMDGE-KLVGIITVTDVLRAFIEV 133
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLIT 215
+V D MT PL V +T + +A LL +RRLPVV GKLVGL+T
Sbjct: 2 LVRDWMTKDPLTVAPDTPVLEAINLLKNKGFRRLPVVKD-GKLVGLVT 48
>gi|383806958|ref|ZP_09962519.1| inosine-5'-monophosphate dehydrogenase [Candidatus Aquiluna sp.
IMCC13023]
gi|383299388|gb|EIC92002.1| inosine-5'-monophosphate dehydrogenase [Candidatus Aquiluna sp.
IMCC13023]
Length = 442
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 32/133 (24%)
Query: 86 HAVKTT--TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSL 143
H V TT T+ E + R++G PVID+D KLVG+V++ D+
Sbjct: 40 HPVTTTPYATIQEVDDLCGRYRVSGLPVIDEDGKLVGIVTNRDM---------------- 83
Query: 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHE-NTNLEDAARLLLETKYRRLP 202
+ E+QR + +V D+MT PL+V + + ++A LL + + +LP
Sbjct: 84 --------RFVLEVQRTTT-----LVKDVMTSMPLIVGKAGIHPDEAMALLAQHRIEKLP 130
Query: 203 VVDGYGKLVGLIT 215
++D GKL GLIT
Sbjct: 131 LIDDNGKLKGLIT 143
>gi|333910621|ref|YP_004484354.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333751210|gb|AEF96289.1| protein of unknown function DUF39 [Methanotorris igneus Kol 5]
Length = 512
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 163 KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K++ K+VG++++ P+V +E+A+R+L++ LP+VD +G+LVG+IT ++ RA
Sbjct: 384 KSDVKLVGEILSKPPIVAPIGITIEEASRILIKNNINHLPIVDEFGRLVGIITSWDIARA 443
Query: 223 ALQIKRDGER 232
Q K+ E
Sbjct: 444 IAQNKKSIEE 453
>gi|374597842|ref|ZP_09670844.1| CBS domain containing membrane protein [Myroides odoratus DSM 2801]
gi|423323824|ref|ZP_17301666.1| hypothetical protein HMPREF9716_01023 [Myroides odoratimimus CIP
103059]
gi|373909312|gb|EHQ41161.1| CBS domain containing membrane protein [Myroides odoratus DSM 2801]
gi|404609042|gb|EKB08467.1| hypothetical protein HMPREF9716_01023 [Myroides odoratimimus CIP
103059]
Length = 138
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 73/146 (50%), Gaps = 21/146 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
+ MTK L AV TT + E + + I PV++ + +LVG++S D+L + S
Sbjct: 7 ISQIMTKV--LIAVPTTKKISEVNQLFTDYNIRHIPVVEGE-QLVGIISSNDILKI-GYS 62
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
N + +N+ + + + D+MT P+VV ++ +++ A LL+
Sbjct: 63 TANMD----VEAINAIYDAYK-------------LEDIMTVNPVVVEDDVTIKEVAELLV 105
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVV 220
E ++ LPVVD LVG++T +++
Sbjct: 106 EQQFHSLPVVDKNKTLVGIVTTTDLI 131
>gi|282162967|ref|YP_003355352.1| hypothetical protein MCP_0297 [Methanocella paludicola SANAE]
gi|282155281|dbj|BAI60369.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 325
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 77/143 (53%), Gaps = 36/143 (25%)
Query: 82 KEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL--DSISGGNQN 139
+ED+ V+ ++D+A++ ++++ + G PVID + +VG++++ D++ L DS+SG
Sbjct: 134 EEDVATVQDDASLDDAIKVMIDRSVGGVPVIDPESIVVGIITERDIVRLMGDSVSGTKVR 193
Query: 140 DTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYR 199
D ++S+ +T AP N +E AA+ ++E+ +R
Sbjct: 194 D-------------------IMSRR--------VTTAP----PNMPIETAAKTMIESGFR 222
Query: 200 RLPVV-DGYGKLVGLITRGNVVR 221
RLPVV D Y + G+IT +++R
Sbjct: 223 RLPVVTDSY--VCGIITATDIMR 243
>gi|400289748|ref|ZP_10791775.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus ratti FA-1 = DSM 20564]
gi|399920539|gb|EJN93356.1| putative acetoin utilization protein, acetoin dehydrogenase
[Streptococcus ratti FA-1 = DSM 20564]
Length = 219
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMTK+ + V TTV +A + + +K + PVI++D LVG++++
Sbjct: 3 VKDFMTKR--VVYVSPDTTVAKATDIMRDKNLRRLPVIENDV-LVGLLTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G +TS P+ +T + E+ LL+KT V D+M + V ++ LEDA L++
Sbjct: 50 -GTIAETS--PS-KATSLSIYEMNYLLNKTK---VRDVMIKDVITVSKDARLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
K LPVVDG ++ G+IT ++ RA L++
Sbjct: 103 VHKIGVLPVVDG-SQMSGIITDKDIFRAFLEV 133
>gi|383319118|ref|YP_005379959.1| transcriptional regulator [Methanocella conradii HZ254]
gi|379320488|gb|AFC99440.1| putative transcriptional regulator [Methanocella conradii HZ254]
Length = 253
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 18/122 (14%)
Query: 101 LVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRL 160
++EK ++ P++D D LVG+VS+ D+ N + K + R
Sbjct: 149 MMEKGVSRVPIMDGDA-LVGMVSETDV-----------------ANAMRSIKKHSPQSRQ 190
Query: 161 LSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220
+ + D+M + T+L+DAA+L+++ LPV+DG G+LVG+ITR ++V
Sbjct: 191 DNNVELLIAMDIMRTNVITATPETSLKDAAKLMVDKDIGALPVLDGQGRLVGIITRRDIV 250
Query: 221 RA 222
RA
Sbjct: 251 RA 252
>gi|333911650|ref|YP_004485383.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333752239|gb|AEF97318.1| protein of unknown function DUF39 [Methanotorris igneus Kol 5]
Length = 511
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%)
Query: 163 KTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
K++ K+VG++++ P+V +E+A+R+L++ LP+VD +G+LVG+IT ++ RA
Sbjct: 384 KSDVKLVGEILSKPPIVAPIGITIEEASRILIKNNINHLPIVDEFGRLVGIITSWDIARA 443
Query: 223 ALQIKRDGER 232
Q K+ E
Sbjct: 444 IAQNKKSIEE 453
>gi|319900081|ref|YP_004159809.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
gi|319415112|gb|ADV42223.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
Length = 491
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 31/135 (22%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+K +TV +AL+ + E +I G PV+DD+ LVG+V++ DL +S
Sbjct: 104 IKRGSTVADALDLMAEYKIGGIPVVDDERYLVGIVTNRDLRFEKDLS------------- 150
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
+ +++K N ++T P T+++ +++L E + +LPVVD
Sbjct: 151 -------KRIDEVMTKEN------IITTNP-----TTDMDAVSQILQEHRIEKLPVVDKD 192
Query: 208 GKLVGLITRGNVVRA 222
KLVGLIT ++ +A
Sbjct: 193 NKLVGLITYKDITKA 207
>gi|440780313|ref|ZP_20958901.1| Two CBS domain containing protein [Clostridium pasteurianum DSM
525]
gi|440221989|gb|ELP61193.1| Two CBS domain containing protein [Clostridium pasteurianum DSM
525]
Length = 141
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 29/154 (18%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V F+T K ++ K T+T+ + LER+ R + P+IDD+ K VG +++ DLL
Sbjct: 3 VAFFLTPKTEVICEKITSTMRQVLERMEYHRYSAIPIIDDEGKYVGTLTEGDLL------ 56
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLV---VHENTNLEDAAR 191
WK N T+ V D+ P +V VH N+N+ED
Sbjct: 57 ----------------WKMKNSPNLKFKDTSKVHVYDI--PRHIVNKPVHINSNIEDLIS 98
Query: 192 LLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ + +PVVD +G+I R +++ +
Sbjct: 99 TAVNQNF--VPVVDDNNIFIGIIKRSDIITYCYE 130
>gi|395777454|ref|ZP_10457969.1| hypothetical protein Saci8_47232 [Streptomyces acidiscabies 84-104]
Length = 235
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG MT ++ + T E + L + RI G PV+D+D ++GV+S DL+ ++
Sbjct: 6 VGALMT--HEVVTARYGTPFKEVVRLLDDHRIGGLPVVDEDGTVIGVISATDLVPHQAVR 63
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G ++ S P +++ + G +MT + V + +AARL+
Sbjct: 64 TGVRHRFS--PRARRA----------AARSRARTAGGIMTAPAVTVRADATATEAARLMA 111
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225
+ RLPVVD +LVG++TR +++ L+
Sbjct: 112 ARRVERLPVVDEEDRLVGIVTRHDLLHVFLR 142
>gi|66804789|ref|XP_636127.1| hypothetical protein DDB_G0289609 [Dictyostelium discoideum AX4]
gi|74852157|sp|Q54H97.1|Y8960_DICDI RecName: Full=CBS domain-containing protein DDB_G0289609
gi|60464476|gb|EAL62622.1| hypothetical protein DDB_G0289609 [Dictyostelium discoideum AX4]
Length = 145
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 21/153 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-LALDSI 133
V M+K L + TT+D AL+ L I PV+D+D L G+++D DL LA DS
Sbjct: 5 VKQLMSKS--LFTINLDTTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRLATDS- 61
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
P N L K V +M P+ + + + + +AA+L+
Sbjct: 62 --------PFLPENNEDR---------LEKLRLHKVSSIMKQNPVTIEDFSPVVEAAKLM 104
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226
T LPV+D G+L+G++TR +++ +++
Sbjct: 105 RVTNVGGLPVLDKKGRLIGMVTRSDLLDLLIKV 137
>gi|302344164|ref|YP_003808693.1| signal transduction protein with CBS domains [Desulfarculus baarsii
DSM 2075]
gi|301640777|gb|ADK86099.1| putative signal transduction protein with CBS domains
[Desulfarculus baarsii DSM 2075]
Length = 222
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 18/130 (13%)
Query: 92 TTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151
T+V A + + E I PV DD +LVG++++ DL D S P+ +T
Sbjct: 18 TSVMRASQMMKENTIRRLPVTDDQGRLVGIITETDL-----------KDAS--PSKATTL 64
Query: 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLV 211
+EL LL++ V D+MT + + +E AA +LE + LPV+DG GKLV
Sbjct: 65 DV-HELYYLLAELK---VKDIMTREVITIGVGETVEKAAVKMLEHRITGLPVMDG-GKLV 119
Query: 212 GLITRGNVVR 221
G+I++G+V R
Sbjct: 120 GVISQGDVFR 129
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223
+V + MT PL V +T++ A++++ E RRLPV D G+LVG+IT ++ A+
Sbjct: 2 LVKEWMTHDPLTVTPDTSVMRASQMMKENTIRRLPVTDDQGRLVGIITETDLKDAS 57
>gi|298345503|ref|YP_003718190.1| putative acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
gi|298235564|gb|ADI66696.1| possible acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
Length = 206
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 88 VKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147
+ + TV +A+E + IT PV+ D KL GVVS DL P+
Sbjct: 8 IDSGATVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRALPS- 52
Query: 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY 207
++T +F E+ LLSK + +M P + + LE+AA L+ +TK LPV+D
Sbjct: 53 DATSLSFGEVAYLLSKLK---IYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLD-E 108
Query: 208 GKLVGLITRGNVVRAALQI 226
GK+VG+IT +V+ A + I
Sbjct: 109 GKVVGVITESDVLDAFIDI 127
>gi|86157756|ref|YP_464541.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774267|gb|ABC81104.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 146
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
+V DFMT+ DL V+ + + A L I PV+ + KLVG+++ DLL
Sbjct: 3 SVADFMTR--DLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLLRSGQA 59
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
D + V ++MT P+ V T L AARL+
Sbjct: 60 GAPAARD--------------------------RAVSEVMTREPVAVRPGTGLAHAARLM 93
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
LE K+ LPV + G LVG++T + VR A + RD
Sbjct: 94 LERKFGCLPVCEDDGLLVGIVTEADFVRFAADVVRD 129
>gi|389689835|ref|ZP_10178948.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388589965|gb|EIM30252.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 239
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 87 AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPN 146
+V+ + TV EA ++ RI+G PV D LVG++S+ DLL + +
Sbjct: 13 SVEPSATVAEAARLMLADRISGLPVTTRDGTLVGMISEGDLLRRGELGTDRK-------- 64
Query: 147 VNSTWKTF----NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLP 202
S+W F L +T+G+ V +M+ P+ + LE+ + +RLP
Sbjct: 65 -RSSWLEFLVGPGTLADEYVRTHGRKVEQVMSGDPVTTRRDAPLEEVVTAMGRHGIKRLP 123
Query: 203 VVDGYGKLVGLITRGNVVRA 222
V++ K+VG++ R +V+RA
Sbjct: 124 VLESR-KVVGIVARSDVLRA 142
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227
+V D+M + V + + +AARL+L + LPV G LVG+I+ G+++R ++
Sbjct: 2 IVEDVMATPVISVEPSATVAEAARLMLADRISGLPVTTRDGTLVGMISEGDLLRRG-ELG 60
Query: 228 RDGERST 234
D +RS+
Sbjct: 61 TDRKRSS 67
>gi|359419070|ref|ZP_09211036.1| inosine-5'-monophosphate dehydrogenase [Gordonia araii NBRC 100433]
gi|358244987|dbj|GAB09105.1| inosine-5'-monophosphate dehydrogenase [Gordonia araii NBRC 100433]
Length = 525
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 33/132 (25%)
Query: 91 TTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150
T T+ E RI+G PV+D +LVG++++ D+
Sbjct: 135 TNTLAEVDAMCARYRISGLPVVDGAGELVGIITNRDM----------------------- 171
Query: 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLV-VHENTNLEDAARLLLETKYRRLPVVDGYGK 209
R N + V ++MTPAPL+ E + + A LL K +LP+VDG GK
Sbjct: 172 --------RFEVDQN-RPVSEVMTPAPLITAQEGVSADAALNLLRRHKIEKLPIVDGAGK 222
Query: 210 LVGLITRGNVVR 221
L GLIT + V+
Sbjct: 223 LTGLITVKDFVK 234
>gi|39997108|ref|NP_953059.1| hypothetical protein GSU2010 [Geobacter sulfurreducens PCA]
gi|409912533|ref|YP_006890998.1| hypothetical protein KN400_2032 [Geobacter sulfurreducens KN400]
gi|39983998|gb|AAR35386.1| CBS domain pair-containing protein [Geobacter sulfurreducens PCA]
gi|298506121|gb|ADI84844.1| CBS domain pair-containing protein [Geobacter sulfurreducens KN400]
Length = 144
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 20/155 (12%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
VG +MTK ++ TV EA+ + EK I PV+D + +VG++++ ++A S
Sbjct: 4 VGTWMTKNP--VTIEKDATVIEAVHLMKEKSIRRLPVMDKE-TIVGILTEK-MVADFRPS 59
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
DT W E+ +LSKT+ V + M P P V +T+L +AA+LL
Sbjct: 60 KATSLDT---------W----EVHYILSKTS---VTEAMNPKPYKVKPDTDLTEAAQLLH 103
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229
+ K + VVD +LVG++T N + A ++I +D
Sbjct: 104 DRKLNGVLVVDDNDRLVGILTVTNALEALIEICKD 138
>gi|218296612|ref|ZP_03497330.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242925|gb|EED09458.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 150
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 79 MTKKEDLH-----AVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
M K +DL +V T ++E +VE+RI V+D + +LVG+V++ D L
Sbjct: 1 MMKAKDLMVSPVVSVPLGTNLEEVARLMVERRIGSVLVVDGEGRLVGIVTESDFLK---- 56
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G T P + + ++L+RLL + V ++MT V L + L+
Sbjct: 57 ERGIPFSTFRAPMLLGRFLNGDQLERLLQEARTTKVEEIMTSPVHAVGLEAPLREVLDLM 116
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVR 221
L +PVVD G+ VG+I+R +++R
Sbjct: 117 LTYDINHVPVVDEAGRPVGIISRFDLLR 144
>gi|254417696|ref|ZP_05031421.1| CBS domain pair protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196175508|gb|EDX70547.1| CBS domain pair protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 336
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 25/151 (16%)
Query: 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSI 133
T D M ++ + + T+D+AL+ + GFPV+D+ LVG++S DL +
Sbjct: 22 TAEDLMQRQ--VETLSLHMTLDDALQMVSRSTHQGFPVVDEG-TLVGIISQSDLTQATKM 78
Query: 134 SGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLL 193
G FP + ++MT P+ V +L D LL
Sbjct: 79 QGNPPR--CPFPGTTP-------------------LAEIMTSHPITVKPTASLVDVLYLL 117
Query: 194 LETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224
RLPV +G KL+G+ITR +++RA L
Sbjct: 118 NRYHLSRLPVTEGR-KLLGIITRSDIIRAEL 147
>gi|398806453|ref|ZP_10565361.1| CBS-domain-containing membrane protein [Polaromonas sp. CF318]
gi|398088370|gb|EJL78936.1| CBS-domain-containing membrane protein [Polaromonas sp. CF318]
Length = 385
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 18 NGVINSVPHLQLPITVATPSHLSKRL------------RFFTVSRE-VKAFAHNGVGITN 64
N + PH+QLP A PS ++L + VSR+ +KA
Sbjct: 171 NATRRAYPHMQLPPPGAAPSAEDRQLDADLDAVLARYNQVLDVSRDDLKALLAETR--LR 228
Query: 65 SVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124
+ + D M++ DL V+ T ++EA L E+RI PV+D +++ G+++
Sbjct: 229 AYDRKLAEVRCEDIMSR--DLVTVEFGTPLEEAWALLRERRIKALPVVDRSFRIAGIITV 286
Query: 125 YDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENT 184
D + D L+ ++ + R + +VVG +MT V
Sbjct: 287 ADFM--------RAADLDLYEGFDAKLRQLVRSTRSVYSDKPEVVGQIMTRNVRVAGRQR 338
Query: 185 NLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L + L T + +P++ +LVG+IT+ ++V A
Sbjct: 339 RLVELVPLFGSTGHHHIPIIGEGERLVGIITQSDLVAA 376
>gi|357636277|ref|ZP_09134152.1| CBS domain protein [Streptococcus macacae NCTC 11558]
gi|357584731|gb|EHJ51934.1| CBS domain protein [Streptococcus macacae NCTC 11558]
Length = 219
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 86/157 (54%), Gaps = 21/157 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFM+KK + V TTV +A + + EKR+ PVI++D KLVG+V++
Sbjct: 3 VKDFMSKK--VVYVSPDTTVAKATDIMREKRLRRLPVIEND-KLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G + + P+ +T + E+ LL+KT + D+M + + ++ +LEDA L++
Sbjct: 50 -GTIAEAT--PS-KATSLSIYEMNYLLNKTK---IRDVMIHDVITISKDAHLEDAIYLMM 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGE 231
K LPVVD ++ G+IT ++ +A L++ G+
Sbjct: 103 NHKIGVLPVVDE-EQISGIITDKDIFKAFLEVSGYGQ 138
>gi|237784941|ref|YP_002905646.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium
kroppenstedtii DSM 44385]
gi|237757853|gb|ACR17103.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
kroppenstedtii DSM 44385]
Length = 504
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 36/133 (27%)
Query: 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149
T VDE + R++G PV++D+ LVG+ ++ D+
Sbjct: 113 TIGHVDELCAKF---RVSGLPVVNDEGMLVGICTNRDM---------------------- 147
Query: 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVV-HENTNLEDAARLLLETKYRRLPVVDGYG 208
R S + KV D+MTP PLVV E + E A LL K +LP+VD G
Sbjct: 148 ---------RFESDLSRKVA-DVMTPMPLVVAQEGVSAEAALNLLSTHKVEKLPIVDSAG 197
Query: 209 KLVGLITRGNVVR 221
KL GLIT + V+
Sbjct: 198 KLTGLITVKDFVK 210
>gi|149010620|ref|ZP_01831991.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP19-BS75]
gi|418166367|ref|ZP_12803023.1| CBS domain pair family protein [Streptococcus pneumoniae GA17971]
gi|418188980|ref|ZP_12825495.1| CBS domain pair family protein [Streptococcus pneumoniae GA47373]
gi|419442244|ref|ZP_13982275.1| CBS domain protein [Streptococcus pneumoniae GA13224]
gi|421210706|ref|ZP_15667694.1| CBS domain pair family protein [Streptococcus pneumoniae 2070035]
gi|421231520|ref|ZP_15688167.1| CBS domain pair family protein [Streptococcus pneumoniae 2080076]
gi|147765101|gb|EDK72030.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP19-BS75]
gi|353829963|gb|EHE10093.1| CBS domain pair family protein [Streptococcus pneumoniae GA17971]
gi|353856122|gb|EHE36091.1| CBS domain pair family protein [Streptococcus pneumoniae GA47373]
gi|379554211|gb|EHZ19291.1| CBS domain protein [Streptococcus pneumoniae GA13224]
gi|395574579|gb|EJG35156.1| CBS domain pair family protein [Streptococcus pneumoniae 2070035]
gi|395596619|gb|EJG56835.1| CBS domain pair family protein [Streptococcus pneumoniae 2080076]
Length = 218
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSIS 134
V DFMT+K + + TTV A + + E+ + PVI++D +LVG+V++
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTE---------- 49
Query: 135 GGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLL 194
G S P+ +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 50 -GTIAQAS--PS-KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 195 ETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDGER 232
+ K LPVVD + ++ G+IT +V +A L+I GE
Sbjct: 103 KNKIGILPVVDNH-QVYGVITDRDVFQAFLEIAGYGEE 139
>gi|389844093|ref|YP_006346173.1| hypothetical protein Theba_1242 [Mesotoga prima MesG1.Ag.4.2]
gi|387858839|gb|AFK06930.1| CBS-domain-containing membrane protein [Mesotoga prima
MesG1.Ag.4.2]
Length = 150
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 84 DLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL--ALDSISGGNQNDT 141
D+ A+ T+++ + + + +G PV+D+++K+VG +S+ D++ AL S Q+
Sbjct: 10 DVSAIFEDETIEDFIVFCLRQNKSGLPVVDEEFKVVGFLSESDVIKSALPSYFSLLQS-A 68
Query: 142 SLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRL 201
S P+ + + L K V M P+++ + + AA LL++ + +
Sbjct: 69 SFIPDTH-------QFVIRLGKIKDDHVSQHMVKPPVLIKPDDTVIYAADLLIKNGLKIM 121
Query: 202 PVVDGYGKLVGLITRGNVVRAALQ 225
PVVD GKLVG++ R ++ A Q
Sbjct: 122 PVVDDEGKLVGIVNRIYLIHVATQ 145
>gi|84496283|ref|ZP_00995137.1| CBS:HPP [Janibacter sp. HTCC2649]
gi|84383051|gb|EAP98932.1| CBS:HPP [Janibacter sp. HTCC2649]
Length = 197
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 22/150 (14%)
Query: 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL--DS 132
+ + MT + ++ ++ A++ L +R++ PV+D+D ++VG++++ D+L L
Sbjct: 3 IAELMTTA--VESIHPDAPLEAAIDVLARERVSALPVVDEDHQVVGIITEGDILRLRLPE 60
Query: 133 ISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARL 192
+ T P V+ QR V D+M+ P + + A
Sbjct: 61 DPRAHLRPTRPMPTVD---------QR---------VRDVMSAEPECATAHQDSSHVALT 102
Query: 193 LLETKYRRLPVVDGYGKLVGLITRGNVVRA 222
L ++ +PVVD +G LVG+++R + VRA
Sbjct: 103 LSRRGWKSMPVVDDHGALVGMVSRSDFVRA 132
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221
++ +LMT A +H + LE A +L + LPVVD ++VG+IT G+++R
Sbjct: 2 LIAELMTTAVESIHPDAPLEAAIDVLARERVSALPVVDEDHQVVGIITEGDILR 55
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,816,660,909
Number of Sequences: 23463169
Number of extensions: 162395959
Number of successful extensions: 453548
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3938
Number of HSP's successfully gapped in prelim test: 4139
Number of HSP's that attempted gapping in prelim test: 432883
Number of HSP's gapped (non-prelim): 19649
length of query: 234
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 96
effective length of database: 9,121,278,045
effective search space: 875642692320
effective search space used: 875642692320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)