Query 026712
Match_columns 234
No_of_seqs 196 out of 1840
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 20:17:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sl7_A CBS domain-containing p 99.9 3.7E-24 1.3E-28 166.1 12.4 159 72-230 3-161 (180)
2 4esy_A CBS domain containing m 99.9 1.1E-23 3.7E-28 162.7 12.4 149 71-227 16-164 (170)
3 4gqw_A CBS domain-containing p 99.9 6.7E-23 2.3E-27 154.5 13.1 148 71-232 3-150 (152)
4 3k6e_A CBS domain protein; str 99.9 1.5E-22 5.3E-27 154.4 12.5 131 74-229 16-146 (156)
5 3lv9_A Putative transporter; C 99.9 7.9E-22 2.7E-26 148.6 16.1 126 70-226 20-146 (148)
6 3jtf_A Magnesium and cobalt ef 99.9 4.9E-22 1.7E-26 146.5 14.2 123 72-226 4-127 (129)
7 3lhh_A CBS domain protein; str 99.9 7.7E-22 2.6E-26 152.7 15.2 129 70-229 39-168 (172)
8 3kpb_A Uncharacterized protein 99.9 3.5E-22 1.2E-26 145.4 12.4 121 73-226 1-121 (122)
9 3lfr_A Putative metal ION tran 99.9 2.4E-22 8.4E-27 149.5 11.6 128 72-228 2-130 (136)
10 3i8n_A Uncharacterized protein 99.9 3.4E-22 1.2E-26 147.4 11.6 125 71-225 4-129 (130)
11 3gby_A Uncharacterized protein 99.9 6.3E-22 2.1E-26 145.6 12.9 125 71-226 3-127 (128)
12 3hf7_A Uncharacterized CBS-dom 99.9 4.3E-22 1.5E-26 147.1 11.5 126 73-226 2-128 (130)
13 3nqr_A Magnesium and cobalt ef 99.9 7.5E-22 2.6E-26 145.0 12.3 124 72-225 2-126 (127)
14 3lqn_A CBS domain protein; csg 99.9 1.3E-21 4.5E-26 147.5 13.7 137 70-230 12-148 (150)
15 2ef7_A Hypothetical protein ST 99.9 2.4E-21 8.1E-26 143.1 14.7 127 72-229 3-129 (133)
16 3fv6_A YQZB protein; CBS domai 99.9 2.1E-21 7.1E-26 148.2 14.6 133 70-232 14-151 (159)
17 2yzi_A Hypothetical protein PH 99.9 4.7E-21 1.6E-25 142.4 14.9 129 71-229 5-133 (138)
18 3kxr_A Magnesium transporter, 99.9 4.7E-21 1.6E-25 152.5 15.8 124 71-229 52-178 (205)
19 3fhm_A Uncharacterized protein 99.9 3.3E-21 1.1E-25 147.9 13.3 134 69-229 20-154 (165)
20 2rih_A Conserved protein with 99.9 5.7E-21 2E-25 142.6 14.0 124 72-226 4-129 (141)
21 3oco_A Hemolysin-like protein 99.9 1.7E-21 5.8E-26 147.7 11.1 127 71-228 18-146 (153)
22 2p9m_A Hypothetical protein MJ 99.9 5.1E-21 1.8E-25 142.1 13.4 127 70-226 5-137 (138)
23 1pbj_A Hypothetical protein; s 99.9 5.4E-21 1.8E-25 139.5 11.8 123 73-226 1-123 (125)
24 2o16_A Acetoin utilization pro 99.9 7.3E-21 2.5E-25 145.3 12.8 135 72-228 4-138 (160)
25 2rc3_A CBS domain; in SITU pro 99.9 1.1E-20 3.8E-25 139.9 13.3 123 74-226 7-132 (135)
26 3ocm_A Putative membrane prote 99.9 9.1E-21 3.1E-25 146.9 13.3 126 70-227 33-159 (173)
27 3ctu_A CBS domain protein; str 99.8 6.6E-21 2.3E-25 144.7 11.7 133 72-229 14-146 (156)
28 1y5h_A Hypothetical protein RV 99.8 4.9E-21 1.7E-25 141.4 9.8 125 71-225 6-131 (133)
29 1o50_A CBS domain-containing p 99.8 2E-20 6.8E-25 142.3 13.3 141 68-227 11-155 (157)
30 2emq_A Hypothetical conserved 99.8 3.3E-20 1.1E-24 140.8 14.4 136 70-229 8-143 (157)
31 3oi8_A Uncharacterized protein 99.8 1.1E-20 3.6E-25 143.9 10.7 120 70-220 35-155 (156)
32 3k2v_A Putative D-arabinose 5- 99.8 2.4E-20 8.4E-25 140.6 12.2 122 72-221 27-148 (149)
33 2nyc_A Nuclear protein SNF4; b 99.8 4.5E-20 1.6E-24 137.7 12.7 127 72-226 7-142 (144)
34 4fry_A Putative signal-transdu 99.8 3.9E-20 1.3E-24 140.5 12.5 130 73-230 7-140 (157)
35 1pvm_A Conserved hypothetical 99.8 3.9E-20 1.3E-24 144.4 12.6 126 72-225 8-133 (184)
36 2pfi_A Chloride channel protei 99.8 7.4E-20 2.5E-24 139.6 13.8 133 71-229 11-151 (164)
37 2uv4_A 5'-AMP-activated protei 99.8 6.6E-20 2.3E-24 138.7 12.8 125 71-225 21-151 (152)
38 1vr9_A CBS domain protein/ACT 99.8 1.5E-19 5.1E-24 144.6 14.9 120 72-226 12-131 (213)
39 1yav_A Hypothetical protein BS 99.8 5.6E-20 1.9E-24 140.0 11.7 136 70-229 11-146 (159)
40 2j9l_A Chloride channel protei 99.8 1E-19 3.5E-24 141.6 13.5 151 70-229 8-169 (185)
41 2oux_A Magnesium transporter; 99.8 1.1E-19 3.8E-24 151.6 13.6 124 70-228 134-262 (286)
42 2yvy_A MGTE, Mg2+ transporter 99.8 3.6E-19 1.2E-23 148.0 14.2 123 71-228 133-260 (278)
43 3ddj_A CBS domain-containing p 99.8 3E-19 1E-23 149.0 12.4 135 71-228 154-288 (296)
44 3l2b_A Probable manganase-depe 99.8 6.8E-19 2.3E-23 143.4 12.2 151 72-224 6-243 (245)
45 3t4n_C Nuclear protein SNF4; C 99.8 1.2E-18 4.2E-23 147.1 13.9 128 71-226 185-321 (323)
46 2d4z_A Chloride channel protei 99.8 3.4E-18 1.2E-22 139.7 15.4 154 70-226 10-247 (250)
47 3kh5_A Protein MJ1225; AMPK, A 99.8 9.2E-19 3.2E-23 144.5 9.6 134 71-223 146-279 (280)
48 2yzq_A Putative uncharacterize 99.8 2.2E-18 7.5E-23 142.6 11.2 151 71-225 124-279 (282)
49 3ddj_A CBS domain-containing p 99.8 9.6E-18 3.3E-22 139.9 14.6 124 72-226 92-215 (296)
50 2zy9_A Mg2+ transporter MGTE; 99.8 6.3E-18 2.2E-22 150.2 14.3 122 71-227 153-279 (473)
51 3kh5_A Protein MJ1225; AMPK, A 99.7 2.2E-17 7.4E-22 136.2 14.8 123 72-225 83-205 (280)
52 2qrd_G Protein C1556.08C; AMPK 99.7 1.8E-17 6.2E-22 140.5 13.3 129 72-228 181-318 (334)
53 3pc3_A CG1753, isoform A; CBS, 99.7 6.7E-18 2.3E-22 152.0 10.7 128 70-228 381-514 (527)
54 2yzq_A Putative uncharacterize 99.7 1E-17 3.5E-22 138.5 8.8 118 73-225 1-119 (282)
55 3org_A CMCLC; transporter, tra 99.7 3.6E-18 1.2E-22 156.7 6.2 154 71-225 451-625 (632)
56 2v8q_E 5'-AMP-activated protei 99.7 8.8E-17 3E-21 136.1 13.0 127 73-227 190-325 (330)
57 3usb_A Inosine-5'-monophosphat 99.7 3.2E-16 1.1E-20 140.1 12.9 118 74-225 114-234 (511)
58 3t4n_C Nuclear protein SNF4; C 99.7 3.6E-16 1.2E-20 131.9 11.9 126 75-226 116-249 (323)
59 2v8q_E 5'-AMP-activated protei 99.7 6.1E-16 2.1E-20 130.9 11.4 142 71-226 33-178 (330)
60 1zfj_A Inosine monophosphate d 99.6 2.3E-15 7.9E-20 134.4 15.0 118 74-225 91-211 (491)
61 4fxs_A Inosine-5'-monophosphat 99.6 2.1E-16 7.1E-21 140.9 4.9 117 74-224 90-208 (496)
62 2qrd_G Protein C1556.08C; AMPK 99.6 1E-14 3.6E-19 123.5 11.9 124 78-225 112-243 (334)
63 1vrd_A Inosine-5'-monophosphat 99.6 1.5E-16 5.3E-21 142.1 0.1 119 74-226 96-216 (494)
64 4avf_A Inosine-5'-monophosphat 99.6 2.3E-16 7.9E-21 140.5 0.1 118 73-225 88-207 (490)
65 1me8_A Inosine-5'-monophosphat 99.6 2.3E-16 8E-21 141.0 -0.1 120 74-226 97-222 (503)
66 4af0_A Inosine-5'-monophosphat 99.5 9.1E-16 3.1E-20 135.0 0.1 112 78-224 143-257 (556)
67 1jcn_A Inosine monophosphate d 99.4 1.6E-15 5.4E-20 136.2 -4.0 120 73-224 108-232 (514)
68 2cu0_A Inosine-5'-monophosphat 99.4 1.3E-14 4.4E-19 129.3 0.1 114 74-224 94-207 (486)
69 3ghd_A A cystathionine beta-sy 99.3 6.8E-12 2.3E-16 82.1 7.5 69 85-180 2-70 (70)
70 1vr9_A CBS domain protein/ACT 99.3 1.1E-11 3.9E-16 98.6 8.5 168 1-208 1-174 (213)
71 3fio_A A cystathionine beta-sy 99.1 5.8E-10 2E-14 72.3 7.5 68 85-179 2-69 (70)
72 4esy_A CBS domain containing m 99.0 4.1E-10 1.4E-14 86.1 5.8 60 164-223 15-74 (170)
73 3lfr_A Putative metal ION tran 98.9 4.9E-09 1.7E-13 77.1 8.0 105 24-131 15-125 (136)
74 3gby_A Uncharacterized protein 98.9 2.2E-09 7.6E-14 77.9 5.7 107 23-131 14-124 (128)
75 3ghd_A A cystathionine beta-sy 98.9 5.8E-09 2E-13 68.0 6.6 48 177-225 2-49 (70)
76 3nqr_A Magnesium and cobalt ef 98.8 8.2E-09 2.8E-13 74.8 7.8 59 70-131 66-124 (127)
77 3lv9_A Putative transporter; C 98.8 1.4E-08 4.6E-13 75.6 8.2 63 164-226 20-85 (148)
78 3usb_A Inosine-5'-monophosphat 98.8 6.5E-08 2.2E-12 86.5 13.5 154 18-208 117-279 (511)
79 3l2b_A Probable manganase-depe 98.8 1.4E-08 4.7E-13 82.1 8.0 62 165-226 5-66 (245)
80 3jtf_A Magnesium and cobalt ef 98.8 2.8E-08 9.7E-13 72.2 8.7 58 71-131 67-124 (129)
81 3kpb_A Uncharacterized protein 98.8 9.6E-09 3.3E-13 73.6 6.0 58 168-225 2-59 (122)
82 3k2v_A Putative D-arabinose 5- 98.8 2.8E-08 9.4E-13 74.0 8.4 60 166-225 27-88 (149)
83 3lhh_A CBS domain protein; str 98.8 1.4E-08 4.9E-13 77.7 6.9 63 164-226 39-104 (172)
84 3oi8_A Uncharacterized protein 98.8 1.3E-08 4.6E-13 76.5 6.5 114 10-128 33-155 (156)
85 3k6e_A CBS domain protein; str 98.8 1.6E-08 5.3E-13 76.4 6.8 60 167-226 15-76 (156)
86 2d4z_A Chloride channel protei 98.8 3.2E-08 1.1E-12 80.5 9.1 62 165-226 11-74 (250)
87 2o16_A Acetoin utilization pro 98.7 2.6E-08 8.9E-13 75.2 7.5 60 166-225 4-63 (160)
88 4af0_A Inosine-5'-monophosphat 98.7 2.5E-09 8.5E-14 94.4 2.0 111 17-130 141-255 (556)
89 3fio_A A cystathionine beta-sy 98.7 2.5E-08 8.4E-13 64.4 6.2 50 176-226 1-50 (70)
90 1me8_A Inosine-5'-monophosphat 98.7 3.3E-09 1.1E-13 94.8 2.5 112 70-212 158-269 (503)
91 2yzi_A Hypothetical protein PH 98.7 3.5E-08 1.2E-12 72.2 7.6 59 165-223 5-63 (138)
92 2rih_A Conserved protein with 98.7 4E-08 1.4E-12 72.3 7.8 60 167-226 5-66 (141)
93 2ef7_A Hypothetical protein ST 98.7 5.6E-08 1.9E-12 70.7 8.1 60 166-226 3-62 (133)
94 3ctu_A CBS domain protein; str 98.7 2.4E-08 8.3E-13 74.8 6.2 62 164-225 12-75 (156)
95 3fv6_A YQZB protein; CBS domai 98.7 6.8E-08 2.3E-12 72.7 8.7 61 164-225 14-74 (159)
96 1pbj_A Hypothetical protein; s 98.7 3.7E-08 1.3E-12 70.7 6.9 58 168-226 2-59 (125)
97 2p9m_A Hypothetical protein MJ 98.7 4.5E-08 1.5E-12 71.6 7.3 60 165-224 6-66 (138)
98 2uv4_A 5'-AMP-activated protei 98.7 3.4E-08 1.2E-12 73.8 6.7 58 72-131 86-149 (152)
99 4gqw_A CBS domain-containing p 98.7 2.8E-08 9.5E-13 73.7 6.0 59 71-131 83-141 (152)
100 1yav_A Hypothetical protein BS 98.7 2.8E-08 9.6E-13 74.8 6.1 62 164-225 11-74 (159)
101 3oco_A Hemolysin-like protein 98.7 4.3E-08 1.5E-12 73.3 7.1 57 72-131 85-141 (153)
102 3kxr_A Magnesium transporter, 98.7 4.8E-08 1.6E-12 77.1 7.4 59 71-131 114-172 (205)
103 3i8n_A Uncharacterized protein 98.7 2.6E-08 8.7E-13 72.5 5.2 62 165-226 4-68 (130)
104 3sl7_A CBS domain-containing p 98.6 3.4E-08 1.1E-12 75.6 5.8 59 71-131 96-154 (180)
105 2pfi_A Chloride channel protei 98.6 6.2E-08 2.1E-12 72.9 7.0 62 164-225 10-73 (164)
106 3hf7_A Uncharacterized CBS-dom 98.6 3.4E-08 1.2E-12 71.9 5.3 58 71-131 68-125 (130)
107 2emq_A Hypothetical conserved 98.6 4.7E-08 1.6E-12 73.2 6.1 62 164-225 8-71 (157)
108 3ocm_A Putative membrane prote 98.6 1.3E-07 4.6E-12 72.4 8.8 64 163-226 32-98 (173)
109 2nyc_A Nuclear protein SNF4; b 98.6 9.8E-08 3.4E-12 70.1 7.7 60 166-225 7-69 (144)
110 3lqn_A CBS domain protein; csg 98.6 3.7E-08 1.3E-12 73.3 5.3 60 165-224 13-74 (150)
111 2rc3_A CBS domain; in SITU pro 98.6 7E-08 2.4E-12 70.4 6.5 59 70-131 71-129 (135)
112 3fhm_A Uncharacterized protein 98.6 8.1E-08 2.8E-12 72.7 6.7 63 164-226 21-86 (165)
113 4fry_A Putative signal-transdu 98.6 8.8E-08 3E-12 71.8 6.6 59 71-132 76-134 (157)
114 1pvm_A Conserved hypothetical 98.6 1.2E-07 4.3E-12 73.1 7.5 58 167-224 9-66 (184)
115 1y5h_A Hypothetical protein RV 98.5 9.3E-08 3.2E-12 69.5 5.6 58 71-131 72-129 (133)
116 1o50_A CBS domain-containing p 98.5 1.1E-07 3.8E-12 71.3 6.0 60 164-224 13-73 (157)
117 2j9l_A Chloride channel protei 98.5 2E-07 6.8E-12 71.6 6.6 62 165-226 9-78 (185)
118 2yvy_A MGTE, Mg2+ transporter 98.4 3E-07 1E-11 75.8 6.5 59 71-131 197-255 (278)
119 3pc3_A CG1753, isoform A; CBS, 98.4 5.2E-07 1.8E-11 81.0 7.4 61 166-226 383-445 (527)
120 2oux_A Magnesium transporter; 98.4 3.6E-07 1.2E-11 75.7 5.9 59 71-131 199-257 (286)
121 4fxs_A Inosine-5'-monophosphat 98.4 3.1E-07 1E-11 81.8 5.3 109 18-130 93-206 (496)
122 4avf_A Inosine-5'-monophosphat 98.4 7.3E-07 2.5E-11 79.3 7.6 109 18-131 92-205 (490)
123 2zy9_A Mg2+ transporter MGTE; 98.3 1.2E-06 4.3E-11 77.5 6.7 59 71-131 217-275 (473)
124 3org_A CMCLC; transporter, tra 98.1 1.8E-06 6.2E-11 79.1 5.1 54 74-130 569-622 (632)
125 1vrd_A Inosine-5'-monophosphat 98.1 2.8E-06 9.7E-11 75.6 5.0 62 71-132 153-214 (494)
126 1jcn_A Inosine monophosphate d 98.0 3.3E-06 1.1E-10 75.5 4.9 61 71-131 171-231 (514)
127 2cu0_A Inosine-5'-monophosphat 98.0 2.7E-06 9.2E-11 75.6 3.4 58 71-130 148-205 (486)
128 1zfj_A Inosine monophosphate d 97.9 0.00015 5E-09 64.4 12.1 61 71-132 150-210 (491)
129 1tif_A IF3-N, translation init 66.0 14 0.00047 23.8 5.0 29 198-226 13-41 (78)
130 1tif_A IF3-N, translation init 45.1 32 0.0011 22.0 4.0 26 105-130 12-37 (78)
131 1svj_A Potassium-transporting 43.3 9.9 0.00034 27.8 1.6 34 186-220 121-154 (156)
132 3k2t_A LMO2511 protein; lister 42.2 34 0.0012 20.4 3.6 34 89-122 10-43 (57)
133 3ka5_A Ribosome-associated pro 41.3 41 0.0014 20.7 4.0 36 89-124 10-45 (65)
134 2lrn_A Thiol:disulfide interch 40.7 64 0.0022 22.3 5.8 42 189-230 101-143 (152)
135 3fan_A Non-structural protein; 35.5 21 0.00071 27.6 2.3 22 197-218 125-146 (213)
136 1p0z_A Sensor kinase CITA; tra 35.3 28 0.00097 24.0 3.0 25 94-118 37-62 (131)
137 3lyv_A Ribosome-associated fac 34.8 44 0.0015 20.6 3.4 34 90-123 12-45 (66)
138 3by8_A Sensor protein DCUS; hi 33.9 30 0.001 24.4 3.0 26 92-117 41-67 (142)
139 1svj_A Potassium-transporting 30.6 33 0.0011 24.9 2.7 35 94-129 121-155 (156)
140 2w5e_A Putative serine proteas 29.8 31 0.0011 25.2 2.5 22 195-216 123-144 (163)
141 3tjo_A Serine protease HTRA1; 28.4 32 0.0011 26.5 2.5 20 197-216 187-206 (231)
142 3raz_A Thioredoxin-related pro 26.8 1.3E+02 0.0043 20.6 5.4 52 179-230 85-142 (151)
143 3lgi_A Protease DEGS; stress-s 26.8 33 0.0011 26.5 2.3 21 196-216 173-193 (237)
144 2qkp_A Uncharacterized protein 25.6 38 0.0013 24.1 2.3 22 107-128 109-131 (151)
145 3sti_A Protease DEGQ; serine p 25.2 40 0.0014 26.4 2.5 21 196-216 184-204 (245)
146 3k6y_A Serine protease, possib 24.3 42 0.0014 25.8 2.5 21 196-216 180-200 (237)
147 3ia1_A THIO-disulfide isomeras 23.7 64 0.0022 22.2 3.2 49 184-232 96-148 (154)
148 2as9_A Serine protease; trypsi 23.2 42 0.0014 25.2 2.2 21 196-216 155-175 (210)
149 2w7s_A Serine protease SPLA; h 22.3 50 0.0017 24.4 2.5 22 196-217 151-172 (200)
150 1ttz_A Conserved hypothetical 22.1 41 0.0014 21.6 1.7 33 195-228 43-77 (87)
151 2kuc_A Putative disulphide-iso 22.1 1.1E+02 0.0037 20.3 4.1 45 185-229 74-122 (130)
152 1r7h_A NRDH-redoxin; thioredox 21.8 72 0.0025 18.7 2.8 34 189-222 39-72 (75)
153 3eyt_A Uncharacterized protein 21.4 1.6E+02 0.0054 20.1 5.0 44 188-231 108-155 (158)
154 2vid_A Serine protease SPLB; h 20.2 59 0.002 24.0 2.5 19 199-217 157-175 (204)
No 1
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.91 E-value=3.7e-24 Score=166.12 Aligned_cols=159 Identities=77% Similarity=1.199 Sum_probs=128.4
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
.++|+++|.+..++.++.+++++.+|+++|.+++++.+||+|++|+++|+|+.+|+.+.....+.......++......|
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 46899999875468899999999999999999999999999999999999999999976544444444444556667888
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhhC
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~~ 230 (234)
..|...+.........++.++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||..||++++.+...+.
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~~~~ 161 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRNA 161 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHHHTC
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHhhhh
Confidence 8888888887777889999999999999999999999999999999999999998899999999999999998876543
No 2
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.90 E-value=1.1e-23 Score=162.71 Aligned_cols=149 Identities=21% Similarity=0.296 Sum_probs=119.0
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
..++|+++|++ +++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++............ ....
T Consensus 16 ~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~-----~~~~ 88 (170)
T 4esy_A 16 RQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASE-----ILSR 88 (170)
T ss_dssp HTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHH-----HHTT
T ss_pred cCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhh-----hhhh
Confidence 36789999998 8999999999999999999999999999999999999999999987632111000000 0000
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhh
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~ 227 (234)
.................++.++|+++++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++++.+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~~~~ 164 (170)
T 4esy_A 89 AIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLLLEE 164 (170)
T ss_dssp TSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSCCC-
T ss_pred ccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHHhcc
Confidence 0011223444455667899999999999999999999999999999999999999 699999999999999886553
No 3
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.89 E-value=6.7e-23 Score=154.48 Aligned_cols=148 Identities=84% Similarity=1.248 Sum_probs=117.0
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
+..+++++|.+..++.++++++++.+|++.|.+++++.+||+|++|+++|+|+.+|+.+.... ...
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------------~~~ 68 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSG--------------DST 68 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC------------------C
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcc--------------cCc
Confidence 367899999875568999999999999999999999999999998999999999999865321 122
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhhC
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRDG 230 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~~ 230 (234)
|..+.............++.++|.++++++.+++++.++++.|.+++.+++||+|++|+++|+||..||++++.+...+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~~~~ 148 (152)
T 4gqw_A 69 WKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKRSG 148 (152)
T ss_dssp CHHHHHHHTC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-----
T ss_pred ccchHHHHHHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhccccc
Confidence 33333333333345568899999999999999999999999999999999999998899999999999999999877665
Q ss_pred CC
Q 026712 231 ER 232 (234)
Q Consensus 231 ~~ 232 (234)
++
T Consensus 149 ~~ 150 (152)
T 4gqw_A 149 DR 150 (152)
T ss_dssp --
T ss_pred cC
Confidence 44
No 4
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.89 E-value=1.5e-22 Score=154.38 Aligned_cols=131 Identities=23% Similarity=0.318 Sum_probs=112.4
Q ss_pred ccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhh
Q 026712 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153 (234)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (234)
+++++|.|..++.++.+++++.+|+++|.+++++++||+|++|+++|+||.+|+.++.......
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~---------------- 79 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLS---------------- 79 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCC----------------
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccc----------------
Confidence 6889999888999999999999999999999999999999989999999999998764221110
Q ss_pred hHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhh
Q 026712 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~ 229 (234)
.......++.++|.++++++.+++++.+|++.|.+++ .+||||++|+++|+||++||++++.+...+
T Consensus 80 -------~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 80 -------QEIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp -------HHHHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSCC
T ss_pred -------cccccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhcc
Confidence 0123467899999999999999999999999998776 499999999999999999999999776543
No 5
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.89 E-value=7.9e-22 Score=148.61 Aligned_cols=126 Identities=19% Similarity=0.308 Sum_probs=113.2
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
+...+|+++|.+..++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|+.+...
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~---------------- 83 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKI---------------- 83 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHH----------------
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh----------------
Confidence 3477899999975578999999999999999999999999999988 89999999999987521
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
.....++.++| ++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 84 --------------~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 84 --------------NENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp --------------HHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred --------------cCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 11267899999 8899999999999999999999999999999889999999999999998753
No 6
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.88 E-value=4.9e-22 Score=146.48 Aligned_cols=123 Identities=22% Similarity=0.346 Sum_probs=109.2
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
..+|+++|.+..++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|+.+...
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~------------------ 65 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML------------------ 65 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT------------------
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc------------------
Confidence 66899999954378999999999999999999999999999986 89999999999987531
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
....++.++|.+ ++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 66 -------------~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 66 -------------EPALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp -------------CTTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHT
T ss_pred -------------cCCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 234679999965 88999999999999999999999999999889999999999999998754
No 7
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.88 E-value=7.7e-22 Score=152.65 Aligned_cols=129 Identities=21% Similarity=0.244 Sum_probs=111.9
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
+...+|+++|.+..++.++++++++.+|+++|.+++++.+||+|++ ++++|+||.+|+.+...
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~---------------- 102 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESI---------------- 102 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHH----------------
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHh----------------
Confidence 4577899999943378999999999999999999999999999987 89999999999987531
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhh
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~ 228 (234)
.....++.++| ++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.....
T Consensus 103 --------------~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~~ 167 (172)
T 3lhh_A 103 --------------AGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFF 167 (172)
T ss_dssp --------------TTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTCC
T ss_pred --------------hcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCCc
Confidence 12357899999 889999999999999999999999999999988999999999999999986544
Q ss_pred h
Q 026712 229 D 229 (234)
Q Consensus 229 ~ 229 (234)
.
T Consensus 168 d 168 (172)
T 3lhh_A 168 Q 168 (172)
T ss_dssp -
T ss_pred c
Confidence 3
No 8
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.88 E-value=3.5e-22 Score=145.37 Aligned_cols=121 Identities=25% Similarity=0.439 Sum_probs=109.4
Q ss_pred cccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhh
Q 026712 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152 (234)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
++|+++|.+ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+|+.+|+.+.+.
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~-------------------- 58 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALA-------------------- 58 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHH--------------------
T ss_pred CchHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHH--------------------
Confidence 368999998 8999999999999999999999999999999999999999999987531
Q ss_pred hhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
....++.++|.++++++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++++.+.
T Consensus 59 -----------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~~ 121 (122)
T 3kpb_A 59 -----------QNKKTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGGK 121 (122)
T ss_dssp -----------TTCCBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC--
T ss_pred -----------hcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhcC
Confidence 223589999999999999999999999999999999999999889999999999999987653
No 9
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=2.4e-22 Score=149.50 Aligned_cols=128 Identities=25% Similarity=0.355 Sum_probs=108.7
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
..+|+++|.+..++.++.+++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++.+...
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~---------------- 65 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKA---------------- 65 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSS----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhc----------------
Confidence 46799999954378999999999999999999999999999987 7999999999999864210
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhh
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~ 228 (234)
.....++.++|.+ ++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.....
T Consensus 66 ------------~~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~ 130 (136)
T 3lfr_A 66 ------------DGDSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIE 130 (136)
T ss_dssp ------------SGGGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-----
T ss_pred ------------cCCCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCc
Confidence 1234689999976 8999999999999999999999999999988999999999999998875443
No 10
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.88 E-value=3.4e-22 Score=147.43 Aligned_cols=125 Identities=22% Similarity=0.344 Sum_probs=108.4
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
...+|+++|.+..++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|+.+....
T Consensus 4 ~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~---------------- 67 (130)
T 3i8n_A 4 QDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS---------------- 67 (130)
T ss_dssp ---CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT----------------
T ss_pred CcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc----------------
Confidence 467899999964467789999999999999999999999999987 899999999999876321
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
.....++.++|. +++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 68 -------------~~~~~~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 68 -------------GSGQKQLGAVMR-PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp -------------TTTTSBHHHHSE-ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred -------------CCCcCCHHHHhc-CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 123578999995 58899999999999999999999999999988999999999999998864
No 11
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.88 E-value=6.3e-22 Score=145.56 Aligned_cols=125 Identities=18% Similarity=0.185 Sum_probs=112.0
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
...+++++|.+ ++.++++++++.+|++.|.+++.+.+||+|+ |+++|+|+.+|+.+......
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~--------------- 64 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWP--------------- 64 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSC---------------
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCC---------------
Confidence 36789999998 8999999999999999999999999999998 99999999999997532110
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
....++.++|.+++.++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++.+.+.
T Consensus 65 -------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 65 -------------TVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp -------------CTTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHTT
T ss_pred -------------cccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHhh
Confidence 122679999999999999999999999999999999999999899999999999999998764
No 12
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.88 E-value=4.3e-22 Score=147.09 Aligned_cols=126 Identities=15% Similarity=0.163 Sum_probs=107.9
Q ss_pred cccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcC-CCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD-DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
.+|+++|.+..++.++++++++.+|++.|.+++++.+||+++ +|+++|+||.+|+.+.......
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~--------------- 66 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE--------------- 66 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC---------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc---------------
Confidence 578999975447899999999999999999999999999975 5899999999999986421110
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
....++.++| ++++++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 67 ------------~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 67 ------------FTKEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp ------------CCHHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred ------------cchhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 1124688888 6689999999999999999999999999999889999999999999998753
No 13
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.87 E-value=7.5e-22 Score=145.02 Aligned_cols=124 Identities=23% Similarity=0.418 Sum_probs=107.8
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
..+++++|.+..++.++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|+.+.+..
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS----------------- 64 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST-----------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc-----------------
Confidence 46799999963358999999999999999999999999999988 899999999999976321
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
.....++.++|.+ ++++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++.+..
T Consensus 65 ------------~~~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 65 ------------DAEAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp ------------TCCCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred ------------cCCCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 1235689999965 7899999999999999999999999999988999999999999998753
No 14
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.87 E-value=1.3e-21 Score=147.54 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=114.6
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
+...+|+++|.+..++.++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.+.......
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~----------- 80 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIE----------- 80 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBC-----------
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccc-----------
Confidence 346789999996336899999999999999999999999999999999999999999998643211100
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhh
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~ 229 (234)
.......++.++|.++++++.+++++.+|++.|.++++ +||+|++|+++|+||..||++++.+...+
T Consensus 81 -----------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~~ 147 (150)
T 3lqn_A 81 -----------FERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVRQ 147 (150)
T ss_dssp -----------GGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred -----------hhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhHh
Confidence 01124578999999999999999999999999999987 99999889999999999999999987654
Q ss_pred C
Q 026712 230 G 230 (234)
Q Consensus 230 ~ 230 (234)
.
T Consensus 148 ~ 148 (150)
T 3lqn_A 148 H 148 (150)
T ss_dssp -
T ss_pred h
Confidence 3
No 15
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.87 E-value=2.4e-21 Score=143.11 Aligned_cols=127 Identities=23% Similarity=0.376 Sum_probs=112.6
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
..+++++|.+ ++.++++++++.+|.+.|.+++.+.+||+| +|+++|+|+.+|+.+.+....
T Consensus 3 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~---------------- 63 (133)
T 2ef7_A 3 EEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGK---------------- 63 (133)
T ss_dssp CCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC----------------
T ss_pred cccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCC----------------
Confidence 5689999998 799999999999999999999999999999 899999999999987532111
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhh
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~ 229 (234)
....++.++|.+++.++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++.+.+...+
T Consensus 64 ------------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 64 ------------SLETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp ------------CTTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC--
T ss_pred ------------CcccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHHH
Confidence 234789999998999999999999999999999999999999889999999999999999877553
No 16
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.87 E-value=2.1e-21 Score=148.18 Aligned_cols=133 Identities=23% Similarity=0.288 Sum_probs=116.5
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
+..++|+++|.+ . +++.+++++.+|++.|.+.+++.+||+|++|+++|+||.+|+.+.+....
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-------------- 76 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQ-------------- 76 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCS--------------
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccC--------------
Confidence 346789999986 4 59999999999999999999999999998899999999999998642111
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCC---cEEEEEehHHHHHHHH
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGYG---KLVGLITRGNVVRAAL 224 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~---~~vGiit~~dll~~l~ 224 (234)
.....++.++|.+ +++++.+++++.+|++.|.+++++++||+|++| +++|+||..||++++.
T Consensus 77 -------------~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 77 -------------ELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp -------------CTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHH
T ss_pred -------------cccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHH
Confidence 1245789999987 899999999999999999999999999999877 9999999999999999
Q ss_pred HhhhhCCC
Q 026712 225 QIKRDGER 232 (234)
Q Consensus 225 ~~~~~~~~ 232 (234)
+.......
T Consensus 144 ~~~~~~~~ 151 (159)
T 3fv6_A 144 SLSENEIL 151 (159)
T ss_dssp HHHTTCCC
T ss_pred HHhhcchh
Confidence 98776543
No 17
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.87 E-value=4.7e-21 Score=142.38 Aligned_cols=129 Identities=26% Similarity=0.366 Sum_probs=113.1
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
...+++++|.+ ++.++++++++.+|.+.|.+++++.+||+|++|+++|+|+.+|+.+.....+.
T Consensus 5 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------------- 68 (138)
T 2yzi_A 5 MKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-------------- 68 (138)
T ss_dssp TTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC--------------
T ss_pred hhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC--------------
Confidence 46789999998 89999999999999999999999999999988999999999999743211110
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhh
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~ 229 (234)
....++.++|.++++++.+++++.++++.|.+++.+++ |+|++|+++|+||..|+++.+.+....
T Consensus 69 -------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~~ 133 (138)
T 2yzi_A 69 -------------PYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLET 133 (138)
T ss_dssp -------------CTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSCC
T ss_pred -------------cccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHHh
Confidence 23478999999999999999999999999999999999 999889999999999999999876543
No 18
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.87 E-value=4.7e-21 Score=152.54 Aligned_cols=124 Identities=20% Similarity=0.289 Sum_probs=113.3
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhC---CCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK---RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~---~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 147 (234)
...+++++|++ +++++++++++.+|++.|.+. ++..+||+|++|+++|+|+.+|++..
T Consensus 52 ~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----------------- 112 (205)
T 3kxr_A 52 SENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH----------------- 112 (205)
T ss_dssp CTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS-----------------
T ss_pred CcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC-----------------
Confidence 46689999998 899999999999999999986 78999999999999999999999753
Q ss_pred cchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhh
Q 026712 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227 (234)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~ 227 (234)
....++.++|.++++++.+++++.+|++.|.+++++.+||||++|+++|+||..|+++.+.+..
T Consensus 113 ----------------~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 113 ----------------EPHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp ----------------CTTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred ----------------CCcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 2457899999999999999999999999999999999999998899999999999999998765
Q ss_pred hh
Q 026712 228 RD 229 (234)
Q Consensus 228 ~~ 229 (234)
.+
T Consensus 177 ~e 178 (205)
T 3kxr_A 177 EA 178 (205)
T ss_dssp C-
T ss_pred HH
Confidence 54
No 19
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=3.3e-21 Score=147.93 Aligned_cols=134 Identities=23% Similarity=0.376 Sum_probs=115.0
Q ss_pred CcCccccccccccC-CCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCc
Q 026712 69 RNGTYTVGDFMTKK-EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147 (234)
Q Consensus 69 ~~~~~~v~~im~~~-~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 147 (234)
....++|+++|.+. .++.++.+++++.+|+++|.+++++.+||+|++|+++|+||.+|+.+.+....
T Consensus 20 ~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~------------ 87 (165)
T 3fhm_A 20 QGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG------------ 87 (165)
T ss_dssp SSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG------------
T ss_pred hhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC------------
Confidence 45578999999952 25899999999999999999999999999999999999999999987532110
Q ss_pred cchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhh
Q 026712 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227 (234)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~ 227 (234)
......++.++|.++++++.+++++.++++.|.+++.+++||+|+ |+++|+||..||++++.+..
T Consensus 88 --------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 88 --------------AASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEI 152 (165)
T ss_dssp --------------GGGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC-
T ss_pred --------------CccccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHH
Confidence 123467899999999999999999999999999999999999997 99999999999999987765
Q ss_pred hh
Q 026712 228 RD 229 (234)
Q Consensus 228 ~~ 229 (234)
..
T Consensus 153 ~~ 154 (165)
T 3fhm_A 153 EA 154 (165)
T ss_dssp --
T ss_pred HH
Confidence 43
No 20
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.86 E-value=5.7e-21 Score=142.62 Aligned_cols=124 Identities=18% Similarity=0.206 Sum_probs=110.0
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCC--cEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDW--KLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~--~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
..+++++|.+ ++.++++++++.+|++.|.+++++.+||+|+++ +++|+|+.+|+.+.+....
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~-------------- 67 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL-------------- 67 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC--------------
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC--------------
Confidence 4579999998 899999999999999999999999999999888 9999999999987532110
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
....++.++|.++++++.++ ++.+|++.|.+++.+++||+|++|+++|+||..|+++.+...
T Consensus 68 --------------~~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 129 (141)
T 2rih_A 68 --------------DLDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAIL 129 (141)
T ss_dssp --------------CTTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHHH
T ss_pred --------------CCCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHHH
Confidence 23578999999999999999 999999999999999999999889999999999998876654
No 21
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.86 E-value=1.7e-21 Score=147.73 Aligned_cols=127 Identities=23% Similarity=0.363 Sum_probs=110.9
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEE-cC-CCcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVI-DD-DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVv-d~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
...+|+++|.+..++.++++++++.+|++.|.+++++.+||+ ++ +|+++|+||.+|+.+.+.
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~---------------- 81 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR---------------- 81 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH----------------
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh----------------
Confidence 367899999864468999999999999999999999999999 65 489999999999987531
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhh
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~ 228 (234)
.....++.++| ++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.....
T Consensus 82 --------------~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~ 146 (153)
T 3oco_A 82 --------------IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLR 146 (153)
T ss_dssp --------------HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC---
T ss_pred --------------cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCC
Confidence 12357899999 889999999999999999999999999999988999999999999999986443
No 22
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.86 E-value=5.1e-21 Score=142.09 Aligned_cols=127 Identities=33% Similarity=0.530 Sum_probs=111.8
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHH-hhhhccCCCCCCCCCCCCCcc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDL-LALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl-~~~~~~~~~~~~~~~~~~~~~ 148 (234)
....+++++|.+ ++.++++++++.+|.+.|.+++.+.+||+|++|+++|+|+.+|+ .+.+...
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-------------- 68 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDK-------------- 68 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTC--------------
T ss_pred cccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhc--------------
Confidence 346789999988 88999999999999999999999999999988999999999999 7653211
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcC-----CCEEEEEcCCCcEEEEEehHHHHHHH
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETK-----YRRLPVVDGYGKLVGLITRGNVVRAA 223 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~-----~~~vpVv~~~~~~vGiit~~dll~~l 223 (234)
.....++.++|.+++.++.+++++.++++.|.+++ .+++||+|++|+++|+||..|+++.+
T Consensus 69 --------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 134 (138)
T 2p9m_A 69 --------------YTLETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTI 134 (138)
T ss_dssp --------------CCSSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred --------------ccCCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHH
Confidence 12356899999999999999999999999999999 99999999889999999999999988
Q ss_pred HHh
Q 026712 224 LQI 226 (234)
Q Consensus 224 ~~~ 226 (234)
.+.
T Consensus 135 ~~~ 137 (138)
T 2p9m_A 135 SKI 137 (138)
T ss_dssp HHC
T ss_pred Hhh
Confidence 653
No 23
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.85 E-value=5.4e-21 Score=139.49 Aligned_cols=123 Identities=20% Similarity=0.347 Sum_probs=107.6
Q ss_pred cccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhh
Q 026712 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152 (234)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
++++++|.+ ++.++++++++.+|.+.|.+++.+.+||+| +|+++|+|+.+|+.+.+....
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~----------------- 60 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGD----------------- 60 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTC-----------------
T ss_pred CCHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCC-----------------
Confidence 368899998 899999999999999999999999999999 899999999999987532110
Q ss_pred hhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
.....++.++|.+++.++.+++++.++++.|.+++.+++||+|+ |+++|+||..|+++++.+.
T Consensus 61 ----------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 61 ----------DLAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMAK 123 (125)
T ss_dssp ----------CTTTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC--
T ss_pred ----------cccccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 01357899999999999999999999999999999999999997 9999999999999987653
No 24
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.85 E-value=7.3e-21 Score=145.32 Aligned_cols=135 Identities=28% Similarity=0.338 Sum_probs=112.8
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
..+|+++|.+ ++.++++++++.+|+++|.+.+++.+||+|++|+++|+|+.+|+.+..........
T Consensus 4 ~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~------------ 69 (160)
T 2o16_A 4 MIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSA------------ 69 (160)
T ss_dssp CCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------------
T ss_pred cCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccc------------
Confidence 5689999998 89999999999999999999999999999988999999999999876421110000
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhh
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~ 228 (234)
.........++.++|.++++++.+++++.+|++.|.+++.+.+||+|+ |+++|+||..||++++.+...
T Consensus 70 -------~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~~ 138 (160)
T 2o16_A 70 -------QGDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLLE 138 (160)
T ss_dssp -------------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHHH
T ss_pred -------cccchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHhc
Confidence 000113457899999999999999999999999999999999999996 999999999999999887543
No 25
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.85 E-value=1.1e-20 Score=139.90 Aligned_cols=123 Identities=28% Similarity=0.445 Sum_probs=108.6
Q ss_pred ccccccc---cCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 74 TVGDFMT---KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 74 ~v~~im~---~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
+++++|. + ++.++++++++.+|++.|.+++.+.+||+| +|+++|+|+.+|+.+.....+.
T Consensus 7 ~v~~im~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~-------------- 69 (135)
T 2rc3_A 7 TVKHLLQEKGH--TVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK-------------- 69 (135)
T ss_dssp BHHHHHHHHCC--CCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS--------------
T ss_pred eHHHHHhcCCC--CcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC--------------
Confidence 8999998 6 899999999999999999999999999999 7999999999999864222110
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
.....++.++|.+++.++.+++++.++++.|.+++.+++||+| +|+++|+||..|+++++.+.
T Consensus 70 ------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 70 ------------PVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp ------------CGGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred ------------CcccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 0235789999999999999999999999999999999999999 79999999999999998765
No 26
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.85 E-value=9.1e-21 Score=146.95 Aligned_cols=126 Identities=21% Similarity=0.218 Sum_probs=110.0
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
+...+|+++|++..+++++++++++.+|++.|.+++++.+||+|++ ++++|+|+.+|+++...
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~---------------- 96 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI---------------- 96 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH----------------
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh----------------
Confidence 3477899999864478999999999999999999999999999987 89999999999987531
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhh
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIK 227 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~ 227 (234)
.....++. + .++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..||++.+....
T Consensus 97 --------------~~~~~~v~-~-~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 97 --------------TEGRVRRN-R-LRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp --------------HHSSCCGG-G-SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCC
T ss_pred --------------cCCcchhH-h-cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcC
Confidence 11345677 4 467899999999999999999999999999998899999999999999998644
No 27
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.85 E-value=6.6e-21 Score=144.67 Aligned_cols=133 Identities=23% Similarity=0.300 Sum_probs=112.6
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
..+++++|.+..++.++++++++.+|.++|.+++++.+||+|++|+++|+||.+|+.+.+......
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~-------------- 79 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLS-------------- 79 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCC--------------
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhcccc--------------
Confidence 457999999544899999999999999999999999999999999999999999998764211100
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhh
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~ 229 (234)
.......++.++|.++++++.+++++.+|++.|.+++ ++||+|++|+++|+||..|+++++.+...+
T Consensus 80 ---------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 80 ---------QEIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp ---------HHHHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC
T ss_pred ---------ccccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 0012367899999999999999999999999999886 799999889999999999999999887654
No 28
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.84 E-value=4.9e-21 Score=141.43 Aligned_cols=125 Identities=24% Similarity=0.391 Sum_probs=108.1
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhh-hhccCCCCCCCCCCCCCccc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA-LDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~-~~~~~~~~~~~~~~~~~~~~ 149 (234)
...+++++|.+ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+|+.+|+.+ .+....
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------------- 69 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGL-------------- 69 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTC--------------
T ss_pred hhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCC--------------
Confidence 35689999998 8899999999999999999999999999988899999999999984 321110
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
.....++.++|.++++++.+++++.++++.|.+++.+++||+|+ |+++|+||..|+++++.+
T Consensus 70 -------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 70 -------------DPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp -------------CTTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC-
T ss_pred -------------CccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 01347899999999999999999999999999999999999996 999999999999987654
No 29
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.84 E-value=2e-20 Score=142.32 Aligned_cols=141 Identities=23% Similarity=0.376 Sum_probs=114.2
Q ss_pred CCcCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCe-eEEEcCCCcEEEEEehHHHhhhhccC---CCCCCCCCC
Q 026712 68 PRNGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITG-FPVIDDDWKLVGVVSDYDLLALDSIS---GGNQNDTSL 143 (234)
Q Consensus 68 ~~~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~-~pVvd~~~~~~Givt~~dl~~~~~~~---~~~~~~~~~ 143 (234)
......+++++|.+ ++.++++++++.+|++.|.+.+.+. +||+|++ +++|+||.+|+.+..... ....
T Consensus 11 ~~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~----- 82 (157)
T 1o50_A 11 HHMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPK----- 82 (157)
T ss_dssp TTCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC------
T ss_pred hhhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhcc-----
Confidence 34557789999998 8999999999999999999999999 9999987 999999999998763210 0000
Q ss_pred CCCccchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHH
Q 026712 144 FPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223 (234)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l 223 (234)
+.. +..........++.++|.+ ++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..||++.+
T Consensus 83 -------~~~---~~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l 151 (157)
T 1o50_A 83 -------EEL---IRSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLAL 151 (157)
T ss_dssp ----------------CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred -------HHH---HHHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHH
Confidence 000 0000011345789999999 99999999999999999999999999999889999999999999998
Q ss_pred HHhh
Q 026712 224 LQIK 227 (234)
Q Consensus 224 ~~~~ 227 (234)
.+..
T Consensus 152 ~~~~ 155 (157)
T 1o50_A 152 WKGR 155 (157)
T ss_dssp HHSC
T ss_pred HHhh
Confidence 7653
No 30
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.84 E-value=3.3e-20 Score=140.80 Aligned_cols=136 Identities=19% Similarity=0.245 Sum_probs=113.4
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
....+|+++|.+..++.++++++++.+|++.|.+++++.+||+|++|+++|+|+.+|+.+.......
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~------------- 74 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLER------------- 74 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSS-------------
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccc-------------
Confidence 3467899999853368899999999999999999999999999988999999999999876432100
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhh
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~ 229 (234)
|. .......++.++|.++++++.+++++.+|++.|.++++ +||+|++|+++|+||..|+++.+.+...+
T Consensus 75 -~~--------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~~ 143 (157)
T 2emq_A 75 -IE--------FERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLHR 143 (157)
T ss_dssp -BC--------GGGGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTCC
T ss_pred -cc--------hHHhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhhc
Confidence 00 00124578999999999999999999999999999987 99999889999999999999999876543
No 31
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.84 E-value=1.1e-20 Score=143.88 Aligned_cols=120 Identities=21% Similarity=0.367 Sum_probs=106.3
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCC-cEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDW-KLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~-~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
....+|+++|.+..++.++++++++.+|++.|.+++++.+||+|+++ +++|+||.+|+.+....
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~--------------- 99 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN--------------- 99 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC---------------
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc---------------
Confidence 34778999998644689999999999999999999999999999874 99999999999875310
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHH
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll 220 (234)
....++.++|.+ ++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|++
T Consensus 100 ---------------~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 100 ---------------PEQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp ---------------GGGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred ---------------CCcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 134679999965 89999999999999999999999999999889999999999986
No 32
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.84 E-value=2.4e-20 Score=140.61 Aligned_cols=122 Identities=23% Similarity=0.355 Sum_probs=107.5
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
.++|+++|.+..++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.+....
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---------------- 90 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGV---------------- 90 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSS----------------
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCC----------------
Confidence 3589999986446889999999999999999999999999998899999999999998643211
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHH
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~ 221 (234)
.....++.++|.++++++.+++++.++++.|.+++++.+||+|+ ++++|+||..||++
T Consensus 91 -----------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~~~~Giit~~dil~ 148 (149)
T 3k2v_A 91 -----------DMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG-DHLLGVVHMHDLLR 148 (149)
T ss_dssp -----------CCTTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHTC
T ss_pred -----------CcccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC-CEEEEEEEHHHhhc
Confidence 02457899999999999999999999999999999999999995 49999999999975
No 33
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.83 E-value=4.5e-20 Score=137.71 Aligned_cols=127 Identities=24% Similarity=0.380 Sum_probs=107.1
Q ss_pred cccccc---ccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 72 TYTVGD---FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 72 ~~~v~~---im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
..++++ +|.+ ++.++++++++.+|++.|.+++++.+||+|++|+++|+|+.+|+.+.+.....
T Consensus 7 ~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~------------ 72 (144)
T 2nyc_A 7 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY------------ 72 (144)
T ss_dssp GSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC--------------
T ss_pred hcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccc------------
Confidence 345677 7876 89999999999999999999999999999988999999999999875321100
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccC------CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHH
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTP------APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~ 222 (234)
.....++.++|.+ +++++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++.
T Consensus 73 --------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~ 138 (144)
T 2nyc_A 73 --------------NDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKY 138 (144)
T ss_dssp ----------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred --------------ccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHH
Confidence 0235678888865 68899999999999999999999999999988999999999999999
Q ss_pred HHHh
Q 026712 223 ALQI 226 (234)
Q Consensus 223 l~~~ 226 (234)
+.+.
T Consensus 139 l~~~ 142 (144)
T 2nyc_A 139 ILLG 142 (144)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8764
No 34
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.83 E-value=3.9e-20 Score=140.52 Aligned_cols=130 Identities=25% Similarity=0.403 Sum_probs=112.4
Q ss_pred cccccccccC----CCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 73 YTVGDFMTKK----EDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 73 ~~v~~im~~~----~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
.+|+++|.+. .++.++++++++.+|++.|.+++++.+||++ +|+++|+|+.+|+.+.+......
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~~----------- 74 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERS----------- 74 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTCC-----------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccCC-----------
Confidence 4799999853 3679999999999999999999999999965 78999999999998764322210
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhh
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~ 228 (234)
....++.++|.++++++.+++++.++++.|.+++++++||+| +|+++|+||..||++++.+...
T Consensus 75 ---------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~ 138 (157)
T 4fry_A 75 ---------------SKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQ 138 (157)
T ss_dssp ---------------SSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCC
T ss_pred ---------------ccccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHH
Confidence 235789999999999999999999999999999999999999 7999999999999999987655
Q ss_pred hC
Q 026712 229 DG 230 (234)
Q Consensus 229 ~~ 230 (234)
+.
T Consensus 139 ~~ 140 (157)
T 4fry_A 139 FT 140 (157)
T ss_dssp CC
T ss_pred hh
Confidence 43
No 35
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.83 E-value=3.9e-20 Score=144.42 Aligned_cols=126 Identities=25% Similarity=0.303 Sum_probs=111.2
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
..+++++|.+ +++++++++++.+|+++|.+++++.+||+|++|+++|+|+.+|+++.+.....
T Consensus 8 ~~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~--------------- 70 (184)
T 1pvm_A 8 FMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK--------------- 70 (184)
T ss_dssp CCBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCC---------------
T ss_pred ccCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc---------------
Confidence 3689999998 89999999999999999999999999999988999999999999875321110
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
.....++.++|.++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..||++++.+
T Consensus 71 -----------~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 71 -----------KPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp -----------CGGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred -----------CcccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 123468999999999999999999999999999999999999988999999999999987655
No 36
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.83 E-value=7.4e-20 Score=139.61 Aligned_cols=133 Identities=18% Similarity=0.321 Sum_probs=111.7
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcC--CCcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD--DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
...+|+++|.+ ++.++++++++.+|+++|.+++++.+||+|+ +|+++|+||.+|+.+.........
T Consensus 11 ~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~---------- 78 (164)
T 2pfi_A 11 HHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR---------- 78 (164)
T ss_dssp CSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC---------------
T ss_pred cCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc----------
Confidence 36789999998 8999999999999999999999999999996 789999999999987642211000
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccCC------CeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHH
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTPA------PLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~~------~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~ 222 (234)
......++.++|..+ ++++.+++++.+|++.|.+++.+++||+| +|+++|+||..||++.
T Consensus 79 -------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~ 144 (164)
T 2pfi_A 79 -------------APGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKA 144 (164)
T ss_dssp ---------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred -------------CCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHH
Confidence 001345678888765 78999999999999999999999999999 7999999999999999
Q ss_pred HHHhhhh
Q 026712 223 ALQIKRD 229 (234)
Q Consensus 223 l~~~~~~ 229 (234)
+.+....
T Consensus 145 ~~~~~~~ 151 (164)
T 2pfi_A 145 ISNLTNP 151 (164)
T ss_dssp HHHHHSC
T ss_pred HHhhhCC
Confidence 9886644
No 37
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.83 E-value=6.6e-20 Score=138.67 Aligned_cols=125 Identities=25% Similarity=0.390 Sum_probs=107.4
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
...+|+++ + ++.++.+++++.+|++.|.+.+++.+||+|++|+++|+|+.+|+.+........
T Consensus 21 ~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~------------- 83 (152)
T 2uv4_A 21 EELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN------------- 83 (152)
T ss_dssp HHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCC-------------
T ss_pred HHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhh-------------
Confidence 36678887 4 689999999999999999999999999999889999999999998764321100
Q ss_pred hhhhHHHHHHHhhcCCCccccccc------CCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMT------PAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~------~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
....++.++|. ++++++.+++++.++++.|.+++.+++||+|++|+++|+||..||++.+.
T Consensus 84 -------------~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 84 -------------NLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp -------------CTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred -------------hhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 12467888886 78899999999999999999999999999998899999999999999875
Q ss_pred H
Q 026712 225 Q 225 (234)
Q Consensus 225 ~ 225 (234)
+
T Consensus 151 ~ 151 (152)
T 2uv4_A 151 L 151 (152)
T ss_dssp -
T ss_pred h
Confidence 4
No 38
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.83 E-value=1.5e-19 Score=144.58 Aligned_cols=120 Identities=30% Similarity=0.392 Sum_probs=110.0
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
..+++++|.+ ++.++.+++++.+|+++|.+.+.+.+||+|++++++|+||.+|+.+..
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~-------------------- 69 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD-------------------- 69 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC--------------------
T ss_pred ccCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc--------------------
Confidence 4478999998 899999999999999999999999999999889999999999998642
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
...++.++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++.+...
T Consensus 70 -------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 70 -------------LDSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp -------------TTSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHS
T ss_pred -------------CCCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 24679999999999999999999999999999999999999879999999999999988754
No 39
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.82 E-value=5.6e-20 Score=140.04 Aligned_cols=136 Identities=19% Similarity=0.251 Sum_probs=113.1
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
....+|+++|.+..++.++++++++.+|++.|.+++++.+||+|++|+++|+|+.+|+.+........ .
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~-~---------- 79 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERI-E---------- 79 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSB-C----------
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhccc-c----------
Confidence 34678999998644688999999999999999999999999999889999999999998764321100 0
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhhh
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKRD 229 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~~ 229 (234)
.......++.++|.++++++.+++++.+|++.|.++++ +||+|++|+++|+||..|+++.+.+...+
T Consensus 80 -----------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 80 -----------FEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp -----------GGGTTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC--
T ss_pred -----------hhhhccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHHh
Confidence 00124578999999999999999999999999998876 99999889999999999999998876544
No 40
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.82 E-value=1e-19 Score=141.59 Aligned_cols=151 Identities=22% Similarity=0.319 Sum_probs=114.6
Q ss_pred cCccccccccccCCC--ceee--cCCCCHHHHHHHHHhCCCCeeEEE--cCCCcEEEEEehHHHhhhhccCCC---CCCC
Q 026712 70 NGTYTVGDFMTKKED--LHAV--KTTTTVDEALERLVEKRITGFPVI--DDDWKLVGVVSDYDLLALDSISGG---NQND 140 (234)
Q Consensus 70 ~~~~~v~~im~~~~~--~~~v--~~~~~v~~a~~~~~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~---~~~~ 140 (234)
....+|+++|.+..+ +.++ .+++++.+|+++|.+++++.+||+ |++|+++|+|+..|+.+.+..... ....
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 457789999998211 7888 999999999999999999999999 778999999999999876432100 0000
Q ss_pred CC--CCCCccchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHH
Q 026712 141 TS--LFPNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGN 218 (234)
Q Consensus 141 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~d 218 (234)
.. .+....... ........++.++|.++++++.+++++.+|++.|.+++.+++||+| +|+++|+||..|
T Consensus 88 ~~~~~~~~~~~~~--------~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~d 158 (185)
T 2j9l_A 88 TSIIYFTEHSPPL--------PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKD 158 (185)
T ss_dssp TCEEECSSSCCCC--------CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHH
T ss_pred cceeecccCCccc--------ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHH
Confidence 00 000000000 0001245689999999999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHhhhh
Q 026712 219 VVRAALQIKRD 229 (234)
Q Consensus 219 ll~~l~~~~~~ 229 (234)
|++.+.+....
T Consensus 159 ll~~l~~~~~~ 169 (185)
T 2j9l_A 159 VLKHIAQMANQ 169 (185)
T ss_dssp HHHHHHHHCC-
T ss_pred HHHHHHHhhcc
Confidence 99999877554
No 41
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.82 E-value=1.1e-19 Score=151.64 Aligned_cols=124 Identities=24% Similarity=0.360 Sum_probs=113.4
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhC-----CCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCC
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-----RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLF 144 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~-----~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 144 (234)
....+++++|++ +++++++++++.+|++.|.+. +++.+||+|++|+++|+||.+|+++.
T Consensus 134 ~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~-------------- 197 (286)
T 2oux_A 134 YEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN-------------- 197 (286)
T ss_dssp SCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS--------------
T ss_pred CChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC--------------
Confidence 346789999998 899999999999999999986 78889999998999999999999863
Q ss_pred CCccchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 145 PNVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
....++.++|.++++++.+++++.+|++.|.+++.+.+||||++|+++|+||..|+++.+.
T Consensus 198 -------------------~~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 198 -------------------DDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVID 258 (286)
T ss_dssp -------------------CTTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred -------------------CCCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 2457899999999999999999999999999999999999998899999999999999988
Q ss_pred Hhhh
Q 026712 225 QIKR 228 (234)
Q Consensus 225 ~~~~ 228 (234)
+...
T Consensus 259 ~e~~ 262 (286)
T 2oux_A 259 DEAA 262 (286)
T ss_dssp HHHH
T ss_pred HHhH
Confidence 7654
No 42
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.81 E-value=3.6e-19 Score=147.95 Aligned_cols=123 Identities=32% Similarity=0.440 Sum_probs=109.2
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhC-----CCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCC
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-----RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFP 145 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~-----~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 145 (234)
...+++++|++ +++++++++++.+|++.|.+. ++..+||+|++|+++|+||.+|++..
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~--------------- 195 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--------------- 195 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---------------
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---------------
Confidence 35689999998 899999999999999999886 78999999988999999999999863
Q ss_pred CccchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 146 NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
....++.++|.++++++++++++.+|++.|.+++.+.+||||++|+++|+||..|+++.+.+
T Consensus 196 ------------------~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 196 ------------------DPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp ------------------CTTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred ------------------CCCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 24578999999999999999999999999999999999999988999999999999998876
Q ss_pred hhh
Q 026712 226 IKR 228 (234)
Q Consensus 226 ~~~ 228 (234)
...
T Consensus 258 e~~ 260 (278)
T 2yvy_A 258 EAT 260 (278)
T ss_dssp ---
T ss_pred HhH
Confidence 543
No 43
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.80 E-value=3e-19 Score=149.04 Aligned_cols=135 Identities=22% Similarity=0.357 Sum_probs=115.5
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
...+++++|.+ ++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+++.+.. .
T Consensus 154 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~----------------~ 215 (296)
T 3ddj_A 154 EIFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAK----------------A 215 (296)
T ss_dssp CCCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH----------------H
T ss_pred ccccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH----------------H
Confidence 45589999987 89999999999999999999999999999999999999999999876320 0
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHhhh
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQIKR 228 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~~~ 228 (234)
|..... ......++.++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||+.||++++.+...
T Consensus 216 ~~~~~~-----~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~~ 288 (296)
T 3ddj_A 216 VDKLDP-----DYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHILV 288 (296)
T ss_dssp HHHTCT-----HHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHH
T ss_pred HhhcCh-----hhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHhc
Confidence 000000 1124578999999999999999999999999999999999999988999999999999999987654
No 44
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.79 E-value=6.8e-19 Score=143.39 Aligned_cols=151 Identities=19% Similarity=0.235 Sum_probs=109.1
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCC-------------
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ------------- 138 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~------------- 138 (234)
..+|+++|.+ ++.++.+++++.+|+++|.+++++.+||+|++|+++|+||..|+.+.+.......
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~ 83 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNIL 83 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHH
Confidence 5589999998 8999999999999999999999999999999899999999999998753221100
Q ss_pred ----------------CCCC----------CCCCc--------cchhh--------------------------------
Q 026712 139 ----------------NDTS----------LFPNV--------NSTWK-------------------------------- 152 (234)
Q Consensus 139 ----------------~~~~----------~~~~~--------~~~~~-------------------------------- 152 (234)
..+. +.... +..+.
T Consensus 84 ~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~ 163 (245)
T 3l2b_A 84 DTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKN 163 (245)
T ss_dssp HHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHH
T ss_pred HHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHc
Confidence 0000 00000 00000
Q ss_pred -------hhHHHHHHHhhcCCCccccccc-CCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 153 -------TFNELQRLLSKTNGKVVGDLMT-PAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 153 -------~~~~~~~~~~~~~~~~v~~im~-~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
.+..+..........++.++|+ ++++++.+++++.++++.|.+++++++||+|++|+++|+||.+|+++...
T Consensus 164 ~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~~ 243 (245)
T 3l2b_A 164 NITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTHK 243 (245)
T ss_dssp TCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-------
T ss_pred CCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchhh
Confidence 0011112222234578999999 89999999999999999999999999999998899999999999998754
No 45
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.79 E-value=1.2e-18 Score=147.09 Aligned_cols=128 Identities=23% Similarity=0.374 Sum_probs=112.6
Q ss_pred Cccccccc---cccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCc
Q 026712 71 GTYTVGDF---MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147 (234)
Q Consensus 71 ~~~~v~~i---m~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 147 (234)
...+++++ |.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+++.+....
T Consensus 185 ~~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~------------ 250 (323)
T 3t4n_C 185 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI------------ 250 (323)
T ss_dssp CCSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTH------------
T ss_pred hhCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhch------------
Confidence 35588999 877 7999999999999999999999999999999999999999999988642100
Q ss_pred cchhhhhHHHHHHHhhcCCCcccccccC------CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHH
Q 026712 148 NSTWKTFNELQRLLSKTNGKVVGDLMTP------APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR 221 (234)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~ 221 (234)
......++.++|.+ +++++.+++++.++++.|.+++++++||+|++|+++|+||..||++
T Consensus 251 --------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~ 316 (323)
T 3t4n_C 251 --------------YNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILK 316 (323)
T ss_dssp --------------HHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHH
T ss_pred --------------hhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHH
Confidence 01235689999987 7899999999999999999999999999998899999999999999
Q ss_pred HHHHh
Q 026712 222 AALQI 226 (234)
Q Consensus 222 ~l~~~ 226 (234)
++...
T Consensus 317 ~l~~~ 321 (323)
T 3t4n_C 317 YILLG 321 (323)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 99865
No 46
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.78 E-value=3.4e-18 Score=139.75 Aligned_cols=154 Identities=21% Similarity=0.292 Sum_probs=110.9
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC--CcEEEEEehHHHhhhhccCC---CC--CC---
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD--WKLVGVVSDYDLLALDSISG---GN--QN--- 139 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~--~~~~Givt~~dl~~~~~~~~---~~--~~--- 139 (234)
...++|+++|.+ +++++.+++++.+|.++|.+++++.+||||++ ++++|+|+..||++++.... .. ..
T Consensus 10 ~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~ 87 (250)
T 2d4z_A 10 KYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAE 87 (250)
T ss_dssp CSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCC
T ss_pred cCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhc
Confidence 457789999998 89999999999999999999999999999974 68999999999987643210 00 00
Q ss_pred ---------C--------CC--CCCCcc----------------chhhh-------------------------------
Q 026712 140 ---------D--------TS--LFPNVN----------------STWKT------------------------------- 153 (234)
Q Consensus 140 ---------~--------~~--~~~~~~----------------~~~~~------------------------------- 153 (234)
. .. .+.+.. ..+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (250)
T 2d4z_A 88 ADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRF 167 (250)
T ss_dssp BCCC---------------------------------------------------------------------------C
T ss_pred ccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccc
Confidence 0 00 000000 00000
Q ss_pred -----hHHHHHHHhhcCCCcc--c-ccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 154 -----FNELQRLLSKTNGKVV--G-DLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 154 -----~~~~~~~~~~~~~~~v--~-~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
..+...........+| . .+|++.++++.+++++.+|..+|.+.|++++||++ .|+++||||++||++++..
T Consensus 168 ~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 168 EEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp CSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 0000011111233455 3 47999999999999999999999999999999998 7999999999999999875
Q ss_pred h
Q 026712 226 I 226 (234)
Q Consensus 226 ~ 226 (234)
.
T Consensus 247 ~ 247 (250)
T 2d4z_A 247 S 247 (250)
T ss_dssp -
T ss_pred H
Confidence 4
No 47
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.77 E-value=9.2e-19 Score=144.47 Aligned_cols=134 Identities=18% Similarity=0.368 Sum_probs=109.1
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccch
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNST 150 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+ ++|+++|+||.+|+++.+... ..
T Consensus 146 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~--------------~~ 208 (280)
T 3kh5_A 146 ENEVIDDYITR--DVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSD--------------WA 208 (280)
T ss_dssp TTCBSGGGCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSH--------------HH
T ss_pred CCCCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhh--------------hh
Confidence 34589999987 88999999999999999999999999999 578999999999998764210 00
Q ss_pred hhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHH
Q 026712 151 WKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l 223 (234)
|..+.. .........++.++|.++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+||++++
T Consensus 209 ~~~~~~--~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 209 FNHMQT--GNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHHHHS--CCTHHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred hhhhcc--cchhhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 000000 00001134689999999999999999999999999999999999999888999999999999865
No 48
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.76 E-value=2.2e-18 Score=142.55 Aligned_cols=151 Identities=21% Similarity=0.324 Sum_probs=110.4
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCC-CCCCCCCCc--
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQ-NDTSLFPNV-- 147 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~-~~~~~~~~~-- 147 (234)
...+++++|.+ ++.++++++++.++.+.|.+++++.+||+|++|+++|+++..|+++......... ....+....
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~ 201 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEW 201 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC---------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhh
Confidence 35689999987 7899999999999999999999999999998899999999999983211000000 000000000
Q ss_pred --cchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 148 --NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 148 --~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
...+..+ ...........++.++|.++++++.+++++.+|+++|.+++++++||+|++|+++|+||++|+++++.+
T Consensus 202 ~~~~~~~~~--~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 202 ILESHPTLL--FEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred hcccchHHH--HhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 0000000 001111234678999999999999999999999999999999999999977899999999999987754
No 49
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.76 E-value=9.6e-18 Score=139.91 Aligned_cols=124 Identities=27% Similarity=0.390 Sum_probs=112.4
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
..+++++|.+ ++.++.+++++.+|++.|.+++++.+||+|++|+++|++|.+|+++.+..
T Consensus 92 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~------------------ 151 (296)
T 3ddj_A 92 TTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKD------------------ 151 (296)
T ss_dssp TSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGG------------------
T ss_pred cccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhc------------------
Confidence 5689999998 89999999999999999999999999999989999999999999875321
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
.....++.++|.++++++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++.+.+.
T Consensus 152 -----------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 215 (296)
T 3ddj_A 152 -----------LDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKA 215 (296)
T ss_dssp -----------SCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred -----------ccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 1234689999999999999999999999999999999999999889999999999999998743
No 50
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.76 E-value=6.3e-18 Score=150.15 Aligned_cols=122 Identities=32% Similarity=0.444 Sum_probs=111.6
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhC-----CCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCC
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEK-----RITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFP 145 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~-----~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 145 (234)
...+++++|++ +++++++++++.++.+.|.+. +++.+||+|++++++|+||.+|++..
T Consensus 153 ~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~--------------- 215 (473)
T 2zy9_A 153 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--------------- 215 (473)
T ss_dssp CTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS---------------
T ss_pred CCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC---------------
Confidence 46689999998 899999999999999999875 57899999988999999999999863
Q ss_pred CccchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 146 NVNSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
..+.++.++|+++++++++++++.++++.|.+++.+.+||||++|+++|+||..|+++.+.+
T Consensus 216 ------------------~~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 216 ------------------DPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp ------------------CTTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred ------------------CCCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 24578999999999999999999999999999999999999999999999999999999876
Q ss_pred hh
Q 026712 226 IK 227 (234)
Q Consensus 226 ~~ 227 (234)
..
T Consensus 278 e~ 279 (473)
T 2zy9_A 278 EA 279 (473)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 51
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.75 E-value=2.2e-17 Score=136.22 Aligned_cols=123 Identities=27% Similarity=0.505 Sum_probs=109.9
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
..+++++|.+ ++.++++++++.+|++.|.+++++.+||+|++|+++|++|.+|+.+.+....
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---------------- 144 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKI---------------- 144 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGS----------------
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcC----------------
Confidence 4589999998 8999999999999999999999999999999999999999999987632111
Q ss_pred hhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
....++.++|.++++++.+++++.++++.|.+++.+++||++ +|+++|+||..|+++.+.+
T Consensus 145 ------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~-~~~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 145 ------------DENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS-EGRLVGIITSTDFIKLLGS 205 (280)
T ss_dssp ------------CTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHTS
T ss_pred ------------CCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHhh
Confidence 223589999999999999999999999999999999999995 8999999999999998753
No 52
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.74 E-value=1.8e-17 Score=140.51 Aligned_cols=129 Identities=19% Similarity=0.242 Sum_probs=110.9
Q ss_pred cccccc---ccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCcc
Q 026712 72 TYTVGD---FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVN 148 (234)
Q Consensus 72 ~~~v~~---im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 148 (234)
..++++ +|.+ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|+++.+.....
T Consensus 181 ~~~v~~l~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~------------ 246 (334)
T 2qrd_G 181 RVPLNQMTIGTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDY------------ 246 (334)
T ss_dssp CCBGGGSSCSBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCG------------
T ss_pred hCcHHHhCCcccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhcccc------------
Confidence 457888 4877 88999999999999999999999999999988999999999999876421110
Q ss_pred chhhhhHHHHHHHhhcCCCcccccccC------CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHH
Q 026712 149 STWKTFNELQRLLSKTNGKVVGDLMTP------APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222 (234)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~ 222 (234)
.....++.++|.. +++++.+++++.+|++.|.+++++++||+|++|+++|+||..||++.
T Consensus 247 --------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~ 312 (334)
T 2qrd_G 247 --------------SNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNY 312 (334)
T ss_dssp --------------GGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHH
T ss_pred --------------ccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHH
Confidence 0124678888874 79999999999999999999999999999988999999999999999
Q ss_pred HHHhhh
Q 026712 223 ALQIKR 228 (234)
Q Consensus 223 l~~~~~ 228 (234)
+.+...
T Consensus 313 ~~~~~~ 318 (334)
T 2qrd_G 313 IIYDKT 318 (334)
T ss_dssp HHSCCC
T ss_pred HHhccc
Confidence 886543
No 53
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.74 E-value=6.7e-18 Score=152.04 Aligned_cols=128 Identities=19% Similarity=0.210 Sum_probs=111.9
Q ss_pred cCccccccccccCCCceeecCC-CCHHHHHHHHHhCCCCeeEEEc-CCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTT-TTVDEALERLVEKRITGFPVID-DDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNV 147 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~-~~v~~a~~~~~~~~~~~~pVvd-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 147 (234)
+...+|+++|.+ +++++.++ +++.+|+++|.+++++.+||+| ++++++|+||.+||++.+....
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~------------ 446 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN------------ 446 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC------------
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc------------
Confidence 557899999998 89999999 9999999999999999999999 7899999999999987632110
Q ss_pred cchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCC----CcEEEEEehHHHHHHH
Q 026712 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY----GKLVGLITRGNVVRAA 223 (234)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~----~~~vGiit~~dll~~l 223 (234)
.....+|.++|+++++++.+++++.+++++|.++++ +||||++ |+++||||+.||++++
T Consensus 447 ---------------~~~~~~V~~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l 509 (527)
T 3pc3_A 447 ---------------RQQSDPAIKALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFI 509 (527)
T ss_dssp ---------------CCTTSBGGGGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHH
T ss_pred ---------------CcCCCcHHHHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHH
Confidence 134578999999999999999999999999976664 7999974 8999999999999999
Q ss_pred HHhhh
Q 026712 224 LQIKR 228 (234)
Q Consensus 224 ~~~~~ 228 (234)
.+...
T Consensus 510 ~~~~~ 514 (527)
T 3pc3_A 510 AAGKQ 514 (527)
T ss_dssp HTCCC
T ss_pred Hhccc
Confidence 98753
No 54
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.72 E-value=1e-17 Score=138.52 Aligned_cols=118 Identities=34% Similarity=0.511 Sum_probs=89.8
Q ss_pred cccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhh
Q 026712 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152 (234)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
++++++|.+ ++.++++++++.+|+++|.+++++.+||+|++|+++|+++.+|+++.
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~---------------------- 56 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVN---------------------- 56 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC-------------------------
T ss_pred CchHHhccC--CCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhh----------------------
Confidence 368899998 89999999999999999999999999999988999999999999854
Q ss_pred hhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHH-HHHH
Q 026712 153 TFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVR-AALQ 225 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~-~l~~ 225 (234)
....++.++|.++++++.+++++.++++.|.+++.+.+||+|++|+++|+||..|+++ .+.+
T Consensus 57 -----------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 57 -----------PDEEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp ------------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT
T ss_pred -----------hccCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhc
Confidence 1246799999988999999999999999999999999999998889999999999998 6653
No 55
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.72 E-value=3.6e-18 Score=156.72 Aligned_cols=154 Identities=16% Similarity=0.108 Sum_probs=108.3
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHH-hCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCC---C
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLV-EKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFP---N 146 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~-~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~---~ 146 (234)
...+|+|+|++.+++.+++++++++|+.+.|. +++++.+||+|++++++|+|+.+|+.+.+.............. .
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~ 530 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLV 530 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC---------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhccccccccccee
Confidence 57899999994338999999999999999999 7999999999998999999999999986533211111000000 0
Q ss_pred ccchhhhhHHHHHHHhh-----------------cCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCc
Q 026712 147 VNSTWKTFNELQRLLSK-----------------TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGK 209 (234)
Q Consensus 147 ~~~~~~~~~~~~~~~~~-----------------~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~ 209 (234)
..+.++..+.+...... ....++.++|+++++++++++++.++++.|.+++.+++||+ ++|+
T Consensus 531 ~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~ 609 (632)
T 3org_A 531 LLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGK 609 (632)
T ss_dssp ----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTE
T ss_pred ccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCE
Confidence 00000000000111000 12235899999999999999999999999999999999999 5899
Q ss_pred EEEEEehHHHHHHHHH
Q 026712 210 LVGLITRGNVVRAALQ 225 (234)
Q Consensus 210 ~vGiit~~dll~~l~~ 225 (234)
++|+||++|+++.+.+
T Consensus 610 lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 610 LVGIVEREDVAYGYSN 625 (632)
T ss_dssp EEEEEEGGGTEECCCC
T ss_pred EEEEEehhhHHHHHhh
Confidence 9999999999876554
No 56
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.71 E-value=8.8e-17 Score=136.13 Aligned_cols=127 Identities=24% Similarity=0.345 Sum_probs=107.0
Q ss_pred cccccc--cc-cCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 73 YTVGDF--MT-KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 73 ~~v~~i--m~-~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
.+++++ |. + ++.++.+++++.++.+.|.+++.+.+||+|++|+++|+||.+|+++........
T Consensus 190 ~~v~~~~v~~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~------------ 255 (330)
T 2v8q_E 190 KSLEELQIGTYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN------------ 255 (330)
T ss_dssp SBHHHHTCSBCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCC------------
T ss_pred CCHHHhcccCcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccc------------
Confidence 345555 54 4 789999999999999999999999999999889999999999999864322110
Q ss_pred hhhhhHHHHHHHhhcCCCcccccc------cCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHH
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLM------TPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im------~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l 223 (234)
....++.++| .++++++.+++++.++++.|.+++++++||+|++|+++|+||..|+++++
T Consensus 256 --------------~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~ 321 (330)
T 2v8q_E 256 --------------NLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQAL 321 (330)
T ss_dssp --------------CCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred --------------cccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHH
Confidence 1135667776 57899999999999999999999999999999889999999999999998
Q ss_pred HHhh
Q 026712 224 LQIK 227 (234)
Q Consensus 224 ~~~~ 227 (234)
.+..
T Consensus 322 ~~~~ 325 (330)
T 2v8q_E 322 VLTG 325 (330)
T ss_dssp HSSC
T ss_pred Hhhc
Confidence 8763
No 57
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.67 E-value=3.2e-16 Score=140.15 Aligned_cols=118 Identities=26% Similarity=0.398 Sum_probs=106.5
Q ss_pred ccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcC--CCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD--DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
+.++.|.+ +++++++++++.++.++|.+.+++.+||+|+ +++++|+||.+|+...
T Consensus 114 ~~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~--------------------- 170 (511)
T 3usb_A 114 RSESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI--------------------- 170 (511)
T ss_dssp TSSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---------------------
T ss_pred cccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---------------------
Confidence 34556666 7899999999999999999999999999998 8999999999999642
Q ss_pred hhhHHHHHHHhhcCCCcccccccC-CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTP-APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
.....++.++|++ +++++++++++.++++.|.+++++.+||||++|+++|+||.+|+++.+..
T Consensus 171 -----------~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 171 -----------QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp -----------CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred -----------ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 1345789999997 89999999999999999999999999999999999999999999999865
No 58
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.67 E-value=3.6e-16 Score=131.91 Aligned_cols=126 Identities=19% Similarity=0.268 Sum_probs=104.5
Q ss_pred cccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCc-----EEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 75 VGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK-----LVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 75 v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~-----~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
+.++|.+ +++++++++++.+|++.|.+++++.+||+|+++. ++|++|.+|+++.+......
T Consensus 116 ~~~~~~~--~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~------------ 181 (323)
T 3t4n_C 116 ALGVDQL--DTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE------------ 181 (323)
T ss_dssp HTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG------------
T ss_pred HhCCCCC--CceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc------------
Confidence 4455666 7899999999999999999999999999998775 99999999998763211100
Q ss_pred hhhhhHHHHHHHhhcCCCccccc---ccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDL---MTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~i---m~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
......++.++ |.++++++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++.+.+.
T Consensus 182 ------------~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~ 249 (323)
T 3t4n_C 182 ------------THFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGG 249 (323)
T ss_dssp ------------GGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTT
T ss_pred ------------hhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhc
Confidence 12345689999 888999999999999999999999999999999889999999999999987654
No 59
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.65 E-value=6.1e-16 Score=130.94 Aligned_cols=142 Identities=19% Similarity=0.215 Sum_probs=109.6
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC-CcEEEEEehHHHhhhhccCC--CCCCCCCCCCCc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD-WKLVGVVSDYDLLALDSISG--GNQNDTSLFPNV 147 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~--~~~~~~~~~~~~ 147 (234)
...+++++|.+..++.++++++++.+|++.|.+++++.+||+|++ ++++|+|+.+|++..+.... .......+.
T Consensus 33 ~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~l~--- 109 (330)
T 2v8q_E 33 KSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYELE--- 109 (330)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCCGG---
T ss_pred HcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhHHh---
Confidence 466899999443389999999999999999999999999999987 78999999999987532110 000000000
Q ss_pred cchhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEehHHHHHHHHHh
Q 026712 148 NSTWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG-YGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~-~~~~vGiit~~dll~~l~~~ 226 (234)
... +... ..++.++|.++++++.+++++.++++.|.+++.+++||+|+ +|+++|+||..|+++++...
T Consensus 110 -----~~~-~~~~-----~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~ 178 (330)
T 2v8q_E 110 -----EHK-IETW-----REVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLF 178 (330)
T ss_dssp -----GCB-HHHH-----HHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHH
T ss_pred -----hcc-HHHH-----HHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHH
Confidence 000 0000 01345778899999999999999999999999999999997 79999999999999988654
No 60
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.65 E-value=2.3e-15 Score=134.38 Aligned_cols=118 Identities=28% Similarity=0.432 Sum_probs=108.5
Q ss_pred ccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEc--CCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchh
Q 026712 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVID--DDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTW 151 (234)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd--~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
.++++|.+ ++.++++++++.+++++|.+.+++.+||+| ++++++|+||.+|+....
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~-------------------- 148 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS-------------------- 148 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--------------------
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--------------------
Confidence 46789998 899999999999999999999999999999 789999999999998631
Q ss_pred hhhHHHHHHHhhcCCCcccccccC-CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 152 KTFNELQRLLSKTNGKVVGDLMTP-APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
....++.++|++ +++++++++++.++++.|.+++.+.+||||++|+++|+||..|+++.+.+
T Consensus 149 ------------~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 149 ------------DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp ------------CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ------------cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 235789999998 89999999999999999999999999999999999999999999999875
No 61
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.62 E-value=2.1e-16 Score=140.89 Aligned_cols=117 Identities=21% Similarity=0.289 Sum_probs=92.7
Q ss_pred ccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhh
Q 026712 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153 (234)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (234)
+++++|.+ +++++++++++.++.++|.+++++.+||+|++++++|+||.+|+...
T Consensus 90 ~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~----------------------- 144 (496)
T 4fxs_A 90 IFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV----------------------- 144 (496)
T ss_dssp HCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC-----------------------
T ss_pred cccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc-----------------------
Confidence 56778987 89999999999999999999999999999998999999999999632
Q ss_pred hHHHHHHHhhcCCCccccccc-C-CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 154 FNELQRLLSKTNGKVVGDLMT-P-APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~im~-~-~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
.....++.++|+ . +++++++++++.++++.|.+++++.+||||++|+++|+||.+|+++...
T Consensus 145 ---------~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 145 ---------TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAES 208 (496)
T ss_dssp ---------CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CC
T ss_pred ---------ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhc
Confidence 124578999998 4 5999999999999999999999999999999999999999999998753
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.58 E-value=1e-14 Score=123.45 Aligned_cols=124 Identities=17% Similarity=0.220 Sum_probs=101.6
Q ss_pred ccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCc-----EEEEEehHHHhhhhccCCCCCCCCCCCCCccchhh
Q 026712 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWK-----LVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152 (234)
Q Consensus 78 im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~-----~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
+|.+..++.++.+++++.++++.|.+.+.+.+||+|+++. ++|++|.+|+.+.+......
T Consensus 112 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~--------------- 176 (334)
T 2qrd_G 112 IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE--------------- 176 (334)
T ss_dssp HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG---------------
T ss_pred hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc---------------
Confidence 4555112389999999999999999999999999997654 99999999998764211000
Q ss_pred hhHHHHHHHhhcCCCcccc---cccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 153 TFNELQRLLSKTNGKVVGD---LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~v~~---im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
......++.+ +|.++++++.+++++.++++.|.+++.+++||+|++|+++|+||..|+++.+.+
T Consensus 177 ---------~~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 177 ---------TAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQD 243 (334)
T ss_dssp ---------GGGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTT
T ss_pred ---------hhhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhc
Confidence 0113467888 488899999999999999999999999999999988999999999999998764
No 63
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.58 E-value=1.5e-16 Score=142.11 Aligned_cols=119 Identities=32% Similarity=0.476 Sum_probs=7.3
Q ss_pred ccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhh
Q 026712 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153 (234)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (234)
+++++|.+ ++.++.+++++.+|+++|.+.+++.+||+|++++++|+||.+|+.+.
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~----------------------- 150 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFE----------------------- 150 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhh-----------------------
Confidence 46788988 89999999999999999999999999999988999999999999752
Q ss_pred hHHHHHHHhhcCCCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 154 FNELQRLLSKTNGKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
.....++.++|++ +++++.+++++.++++.|.+++++.+||||++|+++|+||..|+++.+...
T Consensus 151 ---------~~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 151 ---------KNLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp -------------------------------------------------------------------CHHHHTCT
T ss_pred ---------cCCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 0234689999997 899999999999999999999999999999999999999999999987644
No 64
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.56 E-value=2.3e-16 Score=140.46 Aligned_cols=118 Identities=29% Similarity=0.373 Sum_probs=3.8
Q ss_pred cccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhh
Q 026712 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWK 152 (234)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
.+++++|.+ +++++++++++.++.++|.+.+++.+||+| +++++|+||.+|+...
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~---------------------- 142 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVK---------------------- 142 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhc----------------------
Confidence 457888987 889999999999999999999999999999 7999999999999632
Q ss_pred hhHHHHHHHhhcCCCccccccc-C-CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 153 TFNELQRLLSKTNGKVVGDLMT-P-APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~v~~im~-~-~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
.....++.++|+ . +++++++++++.+++++|.+++++.+||||++|+++|+||.+|+++....
T Consensus 143 ----------~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 207 (490)
T 4avf_A 143 ----------PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTY 207 (490)
T ss_dssp --------------------------------------------------------------------------C
T ss_pred ----------cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccC
Confidence 124578999998 4 69999999999999999999999999999999999999999999998643
No 65
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.56 E-value=2.3e-16 Score=141.02 Aligned_cols=120 Identities=23% Similarity=0.274 Sum_probs=2.7
Q ss_pred ccccc-cccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCC---CcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 74 TVGDF-MTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDD---WKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 74 ~v~~i-m~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~---~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
+..++ |.+ +++++++++++.+++++|.+++++.+||+|++ ++++|+||.+|+.+.
T Consensus 97 ~~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~------------------- 155 (503)
T 1me8_A 97 KNFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID------------------- 155 (503)
T ss_dssp HTTTC---------------------------------------------------------------------------
T ss_pred hhcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-------------------
Confidence 33455 888 89999999999999999999999999999987 899999999999752
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCC--CeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPA--PLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~--~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
......++.++|+++ ++++++++++.+++++|.+++++.+||||++|+++|+||.+||++.+...
T Consensus 156 ------------~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 156 ------------LTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp ------------------------------------------------------------------------------C
T ss_pred ------------hccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 012346899999987 99999999999999999999999999999999999999999999988754
No 66
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.52 E-value=9.1e-16 Score=134.95 Aligned_cols=112 Identities=29% Similarity=0.403 Sum_probs=0.0
Q ss_pred ccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcC---CCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhhh
Q 026712 78 FMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD---DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTF 154 (234)
Q Consensus 78 im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (234)
.|.. +++++.++.++.||.++|.+.+++.+||+|+ +++++|+||.+|+.-.
T Consensus 143 g~i~--dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~------------------------ 196 (556)
T 4af0_A 143 GFIT--DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ------------------------ 196 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccC--CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc------------------------
Confidence 3444 6789999999999999999999999999986 5799999999998531
Q ss_pred HHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 155 NELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 155 ~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
....+|.++|++++++++.+.++.+|.++|.+++++.+||||++|+++|+||++|+++.-.
T Consensus 197 ---------d~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 197 ---------DAETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ---------ccceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 2457899999999999999999999999999999999999999999999999999998654
No 67
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.45 E-value=1.6e-15 Score=136.17 Aligned_cols=120 Identities=25% Similarity=0.420 Sum_probs=71.8
Q ss_pred cccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcC---CCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 73 YTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDD---DWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 73 ~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
.++.++|.+ ++.++.+++++.+|.++|.+++++.+||+|+ +++++|+||.+|+.... .
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~---~-------------- 168 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA---E-------------- 168 (514)
T ss_dssp HTCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC---------------------
T ss_pred hhhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhh---h--------------
Confidence 357788987 7899999999999999999999999999997 58999999999997531 0
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
.....++.++|++ +++++.+++++.++++.|.+++.+.+||||++|+++|+||++|+++.+.
T Consensus 169 -------------~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 169 -------------KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp -------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred -------------ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 0234689999998 9999999999999999999999999999999999999999999987654
No 68
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.42 E-value=1.3e-14 Score=129.33 Aligned_cols=114 Identities=37% Similarity=0.597 Sum_probs=1.9
Q ss_pred ccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhh
Q 026712 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKT 153 (234)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (234)
...+.|.. ++.++++++++.++.++|.+.+++.+||+|+ ++++|+|+.+|+..
T Consensus 94 ~~~~~m~~--~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~------------------------ 146 (486)
T 2cu0_A 94 RAERLIVE--DVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA------------------------ 146 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhcccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc------------------------
Confidence 34667887 8999999999999999999999999999997 89999999999963
Q ss_pred hHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 154 FNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
....++.++|+++++++++++++.++++.|.+++.+.+||||++|+++|+||.+||++.+.
T Consensus 147 ----------~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 147 ----------REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ----------------------------------------------------------------------C
T ss_pred ----------CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 1236799999988999999999999999999999999999999999999999999999864
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.30 E-value=6.8e-12 Score=82.13 Aligned_cols=69 Identities=25% Similarity=0.350 Sum_probs=57.1
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhhhHHHHHHHhhc
Q 026712 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKT 164 (234)
Q Consensus 85 ~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (234)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+|+.+.+...+.. .
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~~--------------------------~ 54 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGKN--------------------------P 54 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTCC--------------------------G
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCCC--------------------------c
Confidence 57899999999999999999999999998 58999999999998764322211 2
Q ss_pred CCCcccccccCCCeEe
Q 026712 165 NGKVVGDLMTPAPLVV 180 (234)
Q Consensus 165 ~~~~v~~im~~~~~~v 180 (234)
...+++++|+++++++
T Consensus 55 ~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 55 KEVKVEEIMTKNPVKI 70 (70)
T ss_dssp GGCBGGGTCEECTTCC
T ss_pred ccCCHHHhcCCCCeEC
Confidence 3568999999988764
No 70
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.27 E-value=1.1e-11 Score=98.59 Aligned_cols=168 Identities=17% Similarity=0.097 Sum_probs=74.8
Q ss_pred CCcccccchhhhhhcccCceecCCCccCCCccccC--cc-cccCcceeeccccccc--ccccccccccccCCCCcCcccc
Q 026712 1 MSSISIPSCLTLARLNANGVINSVPHLQLPITVAT--PS-HLSKRLRFFTVSREVK--AFAHNGVGITNSVPPRNGTYTV 75 (234)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~--~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v 75 (234)
|.|=||+|.--...- ......+++.+.++.++.. .. .......++....... +.....++... ....++
T Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~-----~~~~~v 74 (213)
T 1vr9_A 1 MGSDKIHHHHHHMKV-KKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDL-----DLDSSV 74 (213)
T ss_dssp ------------CBG-GGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTS-----CTTSBS
T ss_pred CCcccccccccccCH-HHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhh-----cCCCcH
Confidence 344455554332222 2233445666777777622 11 2233344444432221 22222232221 124579
Q ss_pred ccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhhhH
Q 026712 76 GDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFN 155 (234)
Q Consensus 76 ~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (234)
+++|.+ ++.++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+....
T Consensus 75 ~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~-------------------- 132 (213)
T 1vr9_A 75 FNKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL-------------------- 132 (213)
T ss_dssp GGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC--------------------
T ss_pred HHHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh--------------------
Confidence 999998 8899999999999999999999999999998899999999999997632111
Q ss_pred HHHHHHhhcCCCcccccccCC-CeEecCCCCHHHHHHHHHHcCCCEEEEEcCCC
Q 026712 156 ELQRLLSKTNGKVVGDLMTPA-PLVVHENTNLEDAARLLLETKYRRLPVVDGYG 208 (234)
Q Consensus 156 ~~~~~~~~~~~~~v~~im~~~-~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~ 208 (234)
.+.+.+..- +.+.....++.++++.|.+++++.++|++.+|
T Consensus 133 ------------~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 133 ------------AMDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp ------------C-----------------------------------------
T ss_pred ------------cCCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 112222211 11113334599999999999999999986544
No 71
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.05 E-value=5.8e-10 Score=72.34 Aligned_cols=68 Identities=24% Similarity=0.326 Sum_probs=55.8
Q ss_pred ceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhhhHHHHHHHhhc
Q 026712 85 LHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKT 164 (234)
Q Consensus 85 ~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (234)
+.++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|+.+.+...+. ..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~--------------------------~~ 54 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGK--------------------------NP 54 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTC--------------------------CG
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCC--------------------------Cc
Confidence 578999999999999999999999999997 999999999999986432211 02
Q ss_pred CCCcccccccCCCeE
Q 026712 165 NGKVVGDLMTPAPLV 179 (234)
Q Consensus 165 ~~~~v~~im~~~~~~ 179 (234)
...++.++|++++++
T Consensus 55 ~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 55 KEVKVEEIMTKNPVK 69 (70)
T ss_dssp GGCBGGGTCEECTTC
T ss_pred ccCCHHHhcCCCCeE
Confidence 346899999887654
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.00 E-value=4.1e-10 Score=86.10 Aligned_cols=60 Identities=32% Similarity=0.536 Sum_probs=55.8
Q ss_pred cCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHH
Q 026712 164 TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223 (234)
Q Consensus 164 ~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l 223 (234)
....+|+++|+++++++.+++++.+|++.|.+++++.+||+|++|+++|+||..|+++.+
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~ 74 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGS 74 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGT
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999998643
No 73
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.89 E-value=4.9e-09 Score=77.07 Aligned_cols=105 Identities=12% Similarity=0.060 Sum_probs=72.0
Q ss_pred CCccCCCccccC--c-ccccCcceeeccccc-cc--ccccccccccccCCCCcCccccccccccCCCceeecCCCCHHHH
Q 026712 24 VPHLQLPITVAT--P-SHLSKRLRFFTVSRE-VK--AFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEA 97 (234)
Q Consensus 24 ~~~l~~~~~~~~--~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~v~~a 97 (234)
+.++.++.++.. . .....+.+++..... .. +.....++............+++++|.+ +.++++++++.+|
T Consensus 15 ~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~~ 91 (136)
T 3lfr_A 15 MISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRP---ATFVPESKRLNVL 91 (136)
T ss_dssp CCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBC---CCEEETTCBHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCC---CeEECCCCcHHHH
Confidence 345556665511 1 122334444444332 12 3344444444332233456789999965 7899999999999
Q ss_pred HHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 98 LERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 98 ~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
+++|.+++.+.+||+|++|+++|+||..|+++.+
T Consensus 92 ~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 92 LREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQI 125 (136)
T ss_dssp HHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC
T ss_pred HHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 9999999999999999999999999999999864
No 74
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.88 E-value=2.2e-09 Score=77.92 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=72.3
Q ss_pred CCCccCCCccccC--c-ccccCcceeeccccccc-ccccccccccccCCCCcCccccccccccCCCceeecCCCCHHHHH
Q 026712 23 SVPHLQLPITVAT--P-SHLSKRLRFFTVSREVK-AFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTTTVDEAL 98 (234)
Q Consensus 23 ~~~~l~~~~~~~~--~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~v~~a~ 98 (234)
+++.+.++.++.. . ........++....+.. +.....++............+++++|.+ ++.++.+++++.+++
T Consensus 14 ~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~~ 91 (128)
T 3gby_A 14 DYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLE--TVRSYRPGEQLFDNL 91 (128)
T ss_dssp CSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCB--CCCCBCTTSBGGGSH
T ss_pred CcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhhCCcccCcHHHHccC--CCcEECCCCCHHHHH
Confidence 3566666666622 1 12223333444333211 2233333333222222223679999998 889999999999999
Q ss_pred HHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 99 ERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 99 ~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
+.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 92 ~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (128)
T 3gby_A 92 ISVAAAKCSVVPLADEDGRYEGVVSRKRILGFL 124 (128)
T ss_dssp HHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred HHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHH
Confidence 999999999999999999999999999999763
No 75
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.86 E-value=5.8e-09 Score=68.00 Aligned_cols=48 Identities=17% Similarity=0.382 Sum_probs=44.3
Q ss_pred CeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 177 PLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 177 ~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
++++.+++++.+|+++|.+++++++||+| +|+++||+|.+|+++.+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHh
Confidence 67899999999999999999999999998 6899999999999976653
No 76
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.85 E-value=8.2e-09 Score=74.81 Aligned_cols=59 Identities=22% Similarity=0.267 Sum_probs=53.3
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
....+++++|.+ +.++++++++.+|++.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 66 ~~~~~v~~~m~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 66 AEAFSMDKVLRT---AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCCHHHHCBC---CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred CCCCCHHHHcCC---CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 356789999965 67899999999999999999999999999999999999999999763
No 77
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.82 E-value=1.4e-08 Score=75.60 Aligned_cols=63 Identities=17% Similarity=0.310 Sum_probs=57.9
Q ss_pred cCCCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHHHHHHHHh
Q 026712 164 TNGKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGY-GKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 164 ~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~-~~~vGiit~~dll~~l~~~ 226 (234)
....+++++|++ +++++.+++++.+|++.|.+++++++||+|++ |+++|+||..|+++.+.+.
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcC
Confidence 456789999998 89999999999999999999999999999977 8999999999999987654
No 78
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.80 E-value=6.5e-08 Score=86.46 Aligned_cols=154 Identities=19% Similarity=0.151 Sum_probs=99.7
Q ss_pred CceecCCCccCCCccccC---cccccCcceeecccc--ccc--ccccccccccccCCCCcCccccccccccCCCceeecC
Q 026712 18 NGVINSVPHLQLPITVAT---PSHLSKRLRFFTVSR--EVK--AFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKT 90 (234)
Q Consensus 18 ~g~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~ 90 (234)
++++.+|.++.++.++.. ......+++++.... ... ......++.. ......+++++|++ .+++++++
T Consensus 117 ~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~----~~~~~~~V~~vM~~-~~~vtv~~ 191 (511)
T 3usb_A 117 SGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF----IQDYSIKISDVMTK-EQLITAPV 191 (511)
T ss_dssp SCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT----CCCSSSBHHHHCCC-CCCCCEET
T ss_pred cccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh----hccCCCcHHHhccc-CCCEEECC
Confidence 456667777777777722 123344555655443 211 2222223221 22346789999985 36889999
Q ss_pred CCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccchhhhhHHHHHHHhhcCCCccc
Q 026712 91 TTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNSTWKTFNELQRLLSKTNGKVVG 170 (234)
Q Consensus 91 ~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 170 (234)
+.++.+++++|.+++...+||+|++|+++|+||.+|+++.... ...+.
T Consensus 192 ~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~--------------------------------p~a~~ 239 (511)
T 3usb_A 192 GTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF--------------------------------PNSAK 239 (511)
T ss_dssp TCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC--------------------------------TTCCB
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc--------------------------------ccchh
Confidence 9999999999999999999999999999999999999986421 12233
Q ss_pred ccccCCCe--EecCCCCHHHHHHHHHHcCCCEEEEEcCCC
Q 026712 171 DLMTPAPL--VVHENTNLEDAARLLLETKYRRLPVVDGYG 208 (234)
Q Consensus 171 ~im~~~~~--~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~ 208 (234)
+.+.+-.+ .+.......+.++.+.+.+.+.+.|-..++
T Consensus 240 D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 240 DKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp CTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred hhccceeeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 33333222 233344445666777788888776655444
No 79
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.79 E-value=1.4e-08 Score=82.12 Aligned_cols=62 Identities=21% Similarity=0.350 Sum_probs=57.9
Q ss_pred CCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 165 NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 165 ~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
...+++++|+++++++.+++++.+|++.|.+++++++||+|++|+++|+||..|+++.+...
T Consensus 5 ~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 5 VKLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp CCCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCC
T ss_pred ccCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999889999999999999998653
No 80
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.78 E-value=2.8e-08 Score=72.18 Aligned_cols=58 Identities=16% Similarity=0.139 Sum_probs=51.8
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|.+ +.++++++++.+|+++|.+++.+.+||+|++|+++|+||..|+++.+
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 35679999965 78999999999999999999999999999989999999999999764
No 81
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.78 E-value=9.6e-09 Score=73.60 Aligned_cols=58 Identities=36% Similarity=0.681 Sum_probs=54.6
Q ss_pred cccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 168 ~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
+++++|.++++++.+++++.++++.|.+++.+.+||+|++|+++|+|+..|+++.+.+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~ 59 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ 59 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 5788999999999999999999999999999999999988999999999999998765
No 82
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.76 E-value=2.8e-08 Score=74.03 Aligned_cols=60 Identities=20% Similarity=0.187 Sum_probs=56.3
Q ss_pred CCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 166 GKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 166 ~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
..+++++|.+ +++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.+
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc
Confidence 4689999998 99999999999999999999999999999988999999999999988754
No 83
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.76 E-value=1.4e-08 Score=77.67 Aligned_cols=63 Identities=17% Similarity=0.363 Sum_probs=54.8
Q ss_pred cCCCccccccc--CCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHHHHHHHHh
Q 026712 164 TNGKVVGDLMT--PAPLVVHENTNLEDAARLLLETKYRRLPVVDGY-GKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 164 ~~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~-~~~vGiit~~dll~~l~~~ 226 (234)
....+++++|+ .+++++.+++++.+|++.|.+++++++||+|++ |+++|+||..|+++.+.+.
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~ 104 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG 104 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc
Confidence 34578999998 778999999999999999999999999999977 8999999999999987643
No 84
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.75 E-value=1.3e-08 Score=76.52 Aligned_cols=114 Identities=15% Similarity=0.169 Sum_probs=76.4
Q ss_pred hhhhhcccCceecC---CCccCCCccccC--c-ccccCcceeecccccc-c--ccccccccccccCCCCcCccccccccc
Q 026712 10 LTLARLNANGVINS---VPHLQLPITVAT--P-SHLSKRLRFFTVSREV-K--AFAHNGVGITNSVPPRNGTYTVGDFMT 80 (234)
Q Consensus 10 ~~~~~~~~~g~~~~---~~~l~~~~~~~~--~-~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~v~~im~ 80 (234)
+.+..+....+.++ +.++.++.++.. . .....+.+++...... . +.....++....... ...+++++|.
T Consensus 33 ~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~--~~~~v~~im~ 110 (156)
T 3oi8_A 33 LDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP--EQFHLKSILR 110 (156)
T ss_dssp HHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG--GGCCHHHHCB
T ss_pred hccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC--CcccHHHHcC
Confidence 34445555566653 566677777622 1 1223344454443321 2 333333443322111 4668999996
Q ss_pred cCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHh
Q 026712 81 KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLL 128 (234)
Q Consensus 81 ~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~ 128 (234)
+ +.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++
T Consensus 111 ~---~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 111 P---AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp C---CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred C---CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 5 78999999999999999999999999999999999999999985
No 85
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.75 E-value=1.6e-08 Score=76.40 Aligned_cols=60 Identities=23% Similarity=0.335 Sum_probs=54.2
Q ss_pred Cccccccc--CCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 167 KVVGDLMT--PAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 167 ~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
..+.++|+ .+++++.+++++.+|++.|.+++++++||+|++|+++|+||.+|+++.+.+.
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~ 76 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEH 76 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHH
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhc
Confidence 46889997 4789999999999999999999999999999889999999999999988754
No 86
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.75 E-value=3.2e-08 Score=80.51 Aligned_cols=62 Identities=26% Similarity=0.313 Sum_probs=56.8
Q ss_pred CCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCC--CcEEEEEehHHHHHHHHHh
Q 026712 165 NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGY--GKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 165 ~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~--~~~vGiit~~dll~~l~~~ 226 (234)
....|.++|+++++++.+++++.+|+++|.+++++.+||||++ ++++|+|++.||++.+...
T Consensus 11 ~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 11 YNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHh
Confidence 4578999999999999999999999999999999999999963 6899999999999987655
No 87
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.73 E-value=2.6e-08 Score=75.18 Aligned_cols=60 Identities=28% Similarity=0.454 Sum_probs=56.0
Q ss_pred CCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 166 ~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
..+++++|.++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHH
Confidence 467999999999999999999999999999999999999988999999999999998764
No 88
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.73 E-value=2.5e-09 Score=94.36 Aligned_cols=111 Identities=20% Similarity=0.136 Sum_probs=1.1
Q ss_pred cCceecCCCccCCCccccCccc---ccCcceeecccccccccccccccccc-cCCCCcCccccccccccCCCceeecCCC
Q 026712 17 ANGVINSVPHLQLPITVATPSH---LSKRLRFFTVSREVKAFAHNGVGITN-SVPPRNGTYTVGDFMTKKEDLHAVKTTT 92 (234)
Q Consensus 17 ~~g~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~im~~~~~~~~v~~~~ 92 (234)
.+|++.+|.++.|+.++..... +..++.+.......... ...++.+. .........+|+++|++ ++++++++.
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~-kLvGIvT~RD~rf~d~~~~V~evMT~--~lvt~~~~~ 217 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS-KLLGIVTGRDVQFQDAETPIKSVMTT--EVVTGSSPI 217 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC-EEEEEEecccccccccceEhhhhccc--ceEEecCCC
Confidence 4677778889999998844332 22333332222111111 11122222 22222446789999998 899999999
Q ss_pred CHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhh
Q 026712 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130 (234)
Q Consensus 93 ~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 130 (234)
++++|.++|.++++..+||||++++++|+||.+|+.+.
T Consensus 218 ~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 218 TLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp --------------------------------------
T ss_pred CHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhh
Confidence 99999999999999999999999999999999999875
No 89
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.72 E-value=2.5e-08 Score=64.45 Aligned_cols=50 Identities=18% Similarity=0.420 Sum_probs=45.7
Q ss_pred CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 176 APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 176 ~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
+++++.+++++.+|++.|.+++++.+||+|+ |+++|+||.+|+++.+.+.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHc
Confidence 3678999999999999999999999999996 9999999999999987553
No 90
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.72 E-value=3.3e-09 Score=94.77 Aligned_cols=112 Identities=20% Similarity=0.164 Sum_probs=22.8
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhccCCCCCCCCCCCCCccc
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDSISGGNQNDTSLFPNVNS 149 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
....+++++|++..+++++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+....
T Consensus 158 ~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~-------------- 223 (503)
T 1me8_A 158 QTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHN-------------- 223 (503)
T ss_dssp ----------------------------------------------------------------CC--------------
T ss_pred cccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhccc--------------
Confidence 346689999998223999999999999999999999999999999999999999999997632110
Q ss_pred hhhhhHHHHHHHhhcCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEE
Q 026712 150 TWKTFNELQRLLSKTNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVG 212 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vG 212 (234)
....+...++. ...+.. ....+.++.|.+.+++.++|-..+|...|
T Consensus 224 --------------~~~d~~~~l~v--~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g~~~~ 269 (503)
T 1me8_A 224 --------------ELVDSQKRYLV--GAGINT-RDFRERVPALVEAGADVLCIDSSDGFSEW 269 (503)
T ss_dssp --------------CCBCTTSCBCC--EEEECS-SSHHHHHHHHHHHTCSEEEECCSCCCSHH
T ss_pred --------------chhcccccccc--ccccCc-hhHHHHHHHHHhhhccceEEecccCcccc
Confidence 00111222221 122344 56667788888889987666333444433
No 91
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.72 E-value=3.5e-08 Score=72.23 Aligned_cols=59 Identities=27% Similarity=0.441 Sum_probs=54.4
Q ss_pred CCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHH
Q 026712 165 NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAA 223 (234)
Q Consensus 165 ~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l 223 (234)
...+++++|.++++++.+++++.+|++.|.+++.+.+||+|++|+++|+|+..|+++.+
T Consensus 5 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 63 (138)
T 2yzi_A 5 MKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRV 63 (138)
T ss_dssp TTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHT
T ss_pred hhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHH
Confidence 45789999999999999999999999999999999999999889999999999998543
No 92
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.71 E-value=4e-08 Score=72.31 Aligned_cols=60 Identities=15% Similarity=0.260 Sum_probs=55.7
Q ss_pred CcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCC--cEEEEEehHHHHHHHHHh
Q 026712 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYG--KLVGLITRGNVVRAALQI 226 (234)
Q Consensus 167 ~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~--~~vGiit~~dll~~l~~~ 226 (234)
.++.++|.++++++.+++++.+|++.|.+++.+.+||+|++| +++|+|+..|+++.+.+.
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~ 66 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR 66 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC
Confidence 579999999999999999999999999999999999999877 999999999999987643
No 93
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.69 E-value=5.6e-08 Score=70.66 Aligned_cols=60 Identities=28% Similarity=0.406 Sum_probs=55.5
Q ss_pred CCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 166 GKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 166 ~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
..+++++|.++++++.+++++.+|++.|.+++.+.+||+| +|+++|+|+..|+++.+.+.
T Consensus 3 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~ 62 (133)
T 2ef7_A 3 EEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKG 62 (133)
T ss_dssp CCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT
T ss_pred cccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcC
Confidence 4679999999999999999999999999999999999999 89999999999999887653
No 94
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.69 E-value=2.4e-08 Score=74.81 Aligned_cols=62 Identities=23% Similarity=0.284 Sum_probs=56.0
Q ss_pred cCCCccccccc--CCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 164 TNGKVVGDLMT--PAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 164 ~~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
....+++++|. .+++++.+++++.+|++.|.+++.+++||+|++|+++|+||..|+++.+..
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh
Confidence 34467999998 679999999999999999999999999999988999999999999998875
No 95
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.69 E-value=6.8e-08 Score=72.74 Aligned_cols=61 Identities=31% Similarity=0.439 Sum_probs=55.6
Q ss_pred cCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 164 TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 164 ~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
....++.++|.+ ++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 14 l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 74 (159)
T 3fv6_A 14 LKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIG 74 (159)
T ss_dssp HTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTS
T ss_pred HhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhc
Confidence 456789999987 5699999999999999999999999999988999999999999998743
No 96
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.69 E-value=3.7e-08 Score=70.74 Aligned_cols=58 Identities=28% Similarity=0.268 Sum_probs=53.6
Q ss_pred cccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 168 VVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 168 ~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
+++++|.++++++.+++++.+|++.|.+++.+.+||+| +|+++|+|+..|+++.+.+.
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~ 59 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEG 59 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHT
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcC
Confidence 47789999999999999999999999999999999999 89999999999999887653
No 97
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.68 E-value=4.5e-08 Score=71.57 Aligned_cols=60 Identities=23% Similarity=0.377 Sum_probs=55.2
Q ss_pred CCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHH-HHHHH
Q 026712 165 NGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNV-VRAAL 224 (234)
Q Consensus 165 ~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dl-l~~l~ 224 (234)
...+++++|.++++++.+++++.+|++.|.+++.+.+||+|++|+++|+|+..|+ ++.+.
T Consensus 6 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 6 KNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp TTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred ccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 3578999999999999999999999999999999999999988999999999999 87654
No 98
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.68 E-value=3.4e-08 Score=73.77 Aligned_cols=58 Identities=22% Similarity=0.306 Sum_probs=52.9
Q ss_pred ccccccccc------cCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 72 TYTVGDFMT------KKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 72 ~~~v~~im~------~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
..++.++|. + ++.++.+++++.+|++.|.+.+.+.+||+|++|+++|+||..|+++.+
T Consensus 86 ~~~v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 567899996 5 789999999999999999999999999999889999999999998753
No 99
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.67 E-value=2.8e-08 Score=73.75 Aligned_cols=59 Identities=31% Similarity=0.486 Sum_probs=54.4
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|.+ ++.++++++++.+|+++|.+++.+.+||+|++|+++|+||.+|+++.+
T Consensus 83 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 83 NGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAA 141 (152)
T ss_dssp -CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred ccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHH
Confidence 35689999998 789999999999999999999999999999899999999999999864
No 100
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.67 E-value=2.8e-08 Score=74.76 Aligned_cols=62 Identities=29% Similarity=0.372 Sum_probs=56.7
Q ss_pred cCCCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 164 TNGKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 164 ~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
....++.++|.+ +++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 74 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFG 74 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBC
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhh
Confidence 345789999987 89999999999999999999999999999988999999999999988754
No 101
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.67 E-value=4.3e-08 Score=73.33 Aligned_cols=57 Identities=21% Similarity=0.318 Sum_probs=53.4
Q ss_pred ccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 72 TYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 72 ~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
..+++++| + ++.++++++++.+|++.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l 141 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEEL 141 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHH
Confidence 56899999 6 789999999999999999999999999999999999999999999874
No 102
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.66 E-value=4.8e-08 Score=77.11 Aligned_cols=59 Identities=29% Similarity=0.317 Sum_probs=54.9
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|.+ ++.++++++++.+|++.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 114 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 114 PHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALV 172 (205)
T ss_dssp TTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 35689999988 789999999999999999999999999999999999999999998764
No 103
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.65 E-value=2.6e-08 Score=72.46 Aligned_cols=62 Identities=16% Similarity=0.232 Sum_probs=53.6
Q ss_pred CCCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHHHHHHHHh
Q 026712 165 NGKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGY-GKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 165 ~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~-~~~vGiit~~dll~~l~~~ 226 (234)
...+++++|++ .++++.+++++.+|++.|.+++++++||+|++ |+++|+||..|+++.+.+.
T Consensus 4 ~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~ 68 (130)
T 3i8n_A 4 QDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSG 68 (130)
T ss_dssp ---CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTT
T ss_pred CcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcC
Confidence 35789999984 46689999999999999999999999999976 8999999999999987654
No 104
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.64 E-value=3.4e-08 Score=75.56 Aligned_cols=59 Identities=29% Similarity=0.482 Sum_probs=54.8
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|.+ ++.++++++++.+|+++|.+++++.+||+|++|+++|+||.+|+++.+
T Consensus 96 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 96 YGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred ccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHH
Confidence 35689999998 889999999999999999999999999999999999999999999864
No 105
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.63 E-value=6.2e-08 Score=72.92 Aligned_cols=62 Identities=23% Similarity=0.378 Sum_probs=56.6
Q ss_pred cCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcC--CCcEEEEEehHHHHHHHHH
Q 026712 164 TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDG--YGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 164 ~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~--~~~~vGiit~~dll~~l~~ 225 (234)
....+++++|.++++++.+++++.+|++.|.+++.+++||+|+ +|+++|+||..|+++.+..
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~ 73 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQA 73 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHh
Confidence 3457899999999999999999999999999999999999996 6899999999999988754
No 106
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.63 E-value=3.4e-08 Score=71.94 Aligned_cols=58 Identities=16% Similarity=0.087 Sum_probs=52.5
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|. ++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|+++.+
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEI 125 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHH
Confidence 3567999994 578999999999999999999999999999999999999999999864
No 107
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.63 E-value=4.7e-08 Score=73.19 Aligned_cols=62 Identities=29% Similarity=0.335 Sum_probs=55.4
Q ss_pred cCCCcccccccC--CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 164 TNGKVVGDLMTP--APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 164 ~~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
....++.++|.+ +++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 8 l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~ 71 (157)
T 2emq_A 8 FMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILG 71 (157)
T ss_dssp --CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBC
T ss_pred HhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhc
Confidence 345789999986 89999999999999999999999999999988999999999999987643
No 108
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.63 E-value=1.3e-07 Score=72.42 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=57.2
Q ss_pred hcCCCccccccc--CCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHHHHHHHHh
Q 026712 163 KTNGKVVGDLMT--PAPLVVHENTNLEDAARLLLETKYRRLPVVDGY-GKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 163 ~~~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~-~~~vGiit~~dll~~l~~~ 226 (234)
.....+++++|+ .+++++.+++++.+|++.|.+++++++||++++ |+++|+|+.+|+++.+.+.
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~ 98 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE 98 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC
Confidence 356788999997 468899999999999999999999999999976 8999999999999987643
No 109
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.62 E-value=9.8e-08 Score=70.13 Aligned_cols=60 Identities=17% Similarity=0.258 Sum_probs=54.5
Q ss_pred CCcccc---cccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHH
Q 026712 166 GKVVGD---LMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQ 225 (234)
Q Consensus 166 ~~~v~~---im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~ 225 (234)
..++++ +|.++++++.+++++.+|++.|.+++.+.+||+|++|+++|+|+..|+++.+.+
T Consensus 7 ~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 7 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp GSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred hcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcc
Confidence 356777 888889999999999999999999999999999988999999999999988754
No 110
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.62 E-value=3.7e-08 Score=73.25 Aligned_cols=60 Identities=32% Similarity=0.418 Sum_probs=55.3
Q ss_pred CCCccccccc--CCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 165 NGKVVGDLMT--PAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 165 ~~~~v~~im~--~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
...+++++|. .+++++.+++++.+|++.|.+++.+++||+|++|+++|+||..|+++.+.
T Consensus 13 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 13 QQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGIL 74 (150)
T ss_dssp HHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTB
T ss_pred hcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 3478999998 46999999999999999999999999999998899999999999998875
No 111
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.61 E-value=7e-08 Score=70.41 Aligned_cols=59 Identities=27% Similarity=0.404 Sum_probs=54.3
Q ss_pred cCccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 70 NGTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 70 ~~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
....+++++|.+ ++.++++++++.+|++.|.+++.+.+||+| +|+++|+||..|+++.+
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHH
Confidence 456789999998 889999999999999999999999999999 79999999999999764
No 112
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.60 E-value=8.1e-08 Score=72.75 Aligned_cols=63 Identities=24% Similarity=0.317 Sum_probs=57.5
Q ss_pred cCCCcccccccC---CCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 164 TNGKVVGDLMTP---APLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 164 ~~~~~v~~im~~---~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
....+++++|.+ +++++.+++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+.+.
T Consensus 21 l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp SSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred hhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhc
Confidence 345789999984 799999999999999999999999999999889999999999999988765
No 113
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.59 E-value=8.8e-08 Score=71.77 Aligned_cols=59 Identities=29% Similarity=0.434 Sum_probs=54.6
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 132 (234)
...+++++|.+ ++.++.+++++.+|+++|.+++++.+||+| +|+++|+||..|+++.+.
T Consensus 76 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 76 KATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVI 134 (157)
T ss_dssp SSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 46789999998 889999999999999999999999999999 799999999999998753
No 114
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.58 E-value=1.2e-07 Score=73.06 Aligned_cols=58 Identities=26% Similarity=0.340 Sum_probs=54.9
Q ss_pred CcccccccCCCeEecCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHHHH
Q 026712 167 KVVGDLMTPAPLVVHENTNLEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 167 ~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
.+++++|.++++++.+++++.+|++.|.+++.+.+||+|++|+++|+|+..|+++.+.
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 6899999999999999999999999999999999999997899999999999998765
No 115
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.55 E-value=9.3e-08 Score=69.47 Aligned_cols=58 Identities=26% Similarity=0.467 Sum_probs=53.4
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|.+ ++.++++++++.+|++.|.+.+.+.+||+|+ |+++|+||..|+++.+
T Consensus 72 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 72 NTATAGELARD--SIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTSBHHHHHTT--CCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred cccCHHHHhcC--CCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 45689999988 8899999999999999999999999999997 8999999999998753
No 116
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.54 E-value=1.1e-07 Score=71.30 Aligned_cols=60 Identities=30% Similarity=0.378 Sum_probs=55.1
Q ss_pred cCCCcccccccCCCeEecCCCCHHHHHHHHHHcCCCE-EEEEcCCCcEEEEEehHHHHHHHH
Q 026712 164 TNGKVVGDLMTPAPLVVHENTNLEDAARLLLETKYRR-LPVVDGYGKLVGLITRGNVVRAAL 224 (234)
Q Consensus 164 ~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~~~-vpVv~~~~~~vGiit~~dll~~l~ 224 (234)
....+++++|.++++++.+++++.+|++.|.+++.+. +||+|++ +++|+||..|+++.+.
T Consensus 13 ~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 13 MKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp CBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHH
T ss_pred hccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHh
Confidence 3456799999999999999999999999999999999 9999976 9999999999998765
No 117
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.50 E-value=2e-07 Score=71.56 Aligned_cols=62 Identities=27% Similarity=0.492 Sum_probs=56.2
Q ss_pred CCCcccccccCC----CeEe--cCCCCHHHHHHHHHHcCCCEEEEE--cCCCcEEEEEehHHHHHHHHHh
Q 026712 165 NGKVVGDLMTPA----PLVV--HENTNLEDAARLLLETKYRRLPVV--DGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 165 ~~~~v~~im~~~----~~~v--~~~~~l~~~~~~m~~~~~~~vpVv--~~~~~~vGiit~~dll~~l~~~ 226 (234)
...+++++|.+. ++++ .+++++.+|++.|.+++.+.+||+ |++|+++|+|+..|+++.+...
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~ 78 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENA 78 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHH
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhh
Confidence 457899999876 7888 999999999999999999999999 7789999999999999988754
No 118
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.43 E-value=3e-07 Score=75.79 Aligned_cols=59 Identities=27% Similarity=0.406 Sum_probs=54.8
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|.+ ++.++++++++.++++.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 197 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i 255 (278)
T 2yvy_A 197 PRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVL 255 (278)
T ss_dssp TTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC
T ss_pred CCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHH
Confidence 46689999987 789999999999999999999999999999999999999999999864
No 119
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.39 E-value=5.2e-07 Score=81.01 Aligned_cols=61 Identities=23% Similarity=0.504 Sum_probs=57.3
Q ss_pred CCcccccccCCCeEecCC-CCHHHHHHHHHHcCCCEEEEEc-CCCcEEEEEehHHHHHHHHHh
Q 026712 166 GKVVGDLMTPAPLVVHEN-TNLEDAARLLLETKYRRLPVVD-GYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 166 ~~~v~~im~~~~~~v~~~-~~l~~~~~~m~~~~~~~vpVv~-~~~~~vGiit~~dll~~l~~~ 226 (234)
..+|.++|+++++++.++ +++.+|++.|.+++++++||+| ++|+++|+||.+||++.+.+.
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc
Confidence 578999999999999999 9999999999999999999999 789999999999999988764
No 120
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.38 E-value=3.6e-07 Score=75.71 Aligned_cols=59 Identities=17% Similarity=0.311 Sum_probs=54.7
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|.+ ++.++++++++.+|++.|.+++...+||+|++|+++|+||..|+++.+
T Consensus 199 ~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 199 DDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVI 257 (286)
T ss_dssp TTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred CCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 46689999988 789999999999999999999999999999999999999999998763
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.36 E-value=3.1e-07 Score=81.82 Aligned_cols=109 Identities=23% Similarity=0.264 Sum_probs=64.1
Q ss_pred CceecCCCccCCCccccCc---ccccCcceeeccccccc--ccccccccccccCCCCcCccccccccccCCCceeecCCC
Q 026712 18 NGVINSVPHLQLPITVATP---SHLSKRLRFFTVSREVK--AFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTT 92 (234)
Q Consensus 18 ~g~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~ 92 (234)
.+++.+|.++.++.++... .......+++....... ......++. .......++.++|++.+++++++++.
T Consensus 93 ~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~----~~~~~~~~v~diM~p~~~~vtv~~~~ 168 (496)
T 4fxs_A 93 AGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR----FVTDLTKSVAAVMTPKERLATVKEGA 168 (496)
T ss_dssp C--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHT----TCCCTTSBGGGTSEEGGGCCEEECC-
T ss_pred cccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHh----hcccCCCcHHHHhcCCCCCEEECCCC
Confidence 4566677777777777221 23334455555443222 222222222 12234678999999432489999999
Q ss_pred CHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhh
Q 026712 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130 (234)
Q Consensus 93 ~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 130 (234)
++.+++++|.+++...+||+|++|+++|+||.+|+++.
T Consensus 169 ~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~ 206 (496)
T 4fxs_A 169 TGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206 (496)
T ss_dssp ---CGGGTCC---CCCEEEECTTSBCCEEECCC-----
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHh
Confidence 99999999999999999999999999999999999976
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.36 E-value=7.3e-07 Score=79.28 Aligned_cols=109 Identities=19% Similarity=0.210 Sum_probs=0.4
Q ss_pred CceecCCCccCCCccccCc---ccccCcceeeccccccc--ccccccccccccCCCCcCccccccccccCCCceeecCCC
Q 026712 18 NGVINSVPHLQLPITVATP---SHLSKRLRFFTVSREVK--AFAHNGVGITNSVPPRNGTYTVGDFMTKKEDLHAVKTTT 92 (234)
Q Consensus 18 ~g~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~ 92 (234)
.+++.+|.++.++.++... .....+.+++... ... ......++.. ......+++++|++.++++++++++
T Consensus 92 ~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~----~~~~~~~V~~vMtp~~~~vtv~~~~ 166 (490)
T 4avf_A 92 TAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRV----KPNAGDTVAAIMTPKDKLVTAREGT 166 (490)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhh----ccccCCcHHHHhccCCCCEEECCCC
Confidence 4455566667777666222 2222334444333 111 1122222211 1234668999999422489999999
Q ss_pred CHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 93 TVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 93 ~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
++.+++++|.++++..+||+|++|+++|+||.+|+++..
T Consensus 167 ~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 167 PLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------
T ss_pred cHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 999999999999999999999999999999999999863
No 123
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.26 E-value=1.2e-06 Score=77.51 Aligned_cols=59 Identities=27% Similarity=0.406 Sum_probs=54.8
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...+++++|++ ++.++++++++.++++.|.+++...+||+|++|+++|+||.+|+.+.+
T Consensus 217 ~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 217 PRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVL 275 (473)
T ss_dssp TTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHH
Confidence 46689999987 799999999999999999999999999999999999999999998763
No 124
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.13 E-value=1.8e-06 Score=79.11 Aligned_cols=54 Identities=19% Similarity=-0.001 Sum_probs=49.5
Q ss_pred ccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhh
Q 026712 74 TVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130 (234)
Q Consensus 74 ~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 130 (234)
+++++|++ ++.++++++++.|+.+.|.+++.+.+||+ ++|+++|+||.+|+.+.
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~ 622 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYG 622 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEEC
T ss_pred ccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHH
Confidence 48899998 89999999999999999999999999999 67999999999999875
No 125
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.07 E-value=2.8e-06 Score=75.61 Aligned_cols=62 Identities=27% Similarity=0.442 Sum_probs=4.3
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 132 (234)
...++.++|++.+++.++++++++.+++++|.++++..+||+|++|+++|+||..|+++...
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp --------------------------------------------------------CHHHHT
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 35689999985335889999999999999999999999999999999999999999998743
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.04 E-value=3.3e-06 Score=75.54 Aligned_cols=61 Identities=25% Similarity=0.300 Sum_probs=42.5
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALD 131 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 131 (234)
...++.++|.+..++.++.+++++.++.++|.+++...+||+|++|+++|+||.+|+++.+
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 4568999998533588999999999999999999999999999999999999999998764
No 127
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.00 E-value=2.7e-06 Score=75.62 Aligned_cols=58 Identities=38% Similarity=0.573 Sum_probs=0.0
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhh
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLAL 130 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 130 (234)
...++.++|.+ ++.++++++++.+++++|.+++...+||+|++|+++|+||.+|+++.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~ 205 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVAR 205 (486)
T ss_dssp ------------------------------------------------------------
T ss_pred CCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHh
Confidence 35679999997 78999999999999999999999999999999999999999999976
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.86 E-value=0.00015 Score=64.42 Aligned_cols=61 Identities=23% Similarity=0.338 Sum_probs=54.6
Q ss_pred CccccccccccCCCceeecCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhhhhc
Q 026712 71 GTYTVGDFMTKKEDLHAVKTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLALDS 132 (234)
Q Consensus 71 ~~~~v~~im~~~~~~~~v~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 132 (234)
...+++++|++. +++++++++++.++++.|.+++...+||+|++++++|++|.+|+++.+.
T Consensus 150 ~~~~v~~im~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 150 YNAPISEHMTSE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSSBTTTSCCCS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 466899999841 4789999999999999999999999999999999999999999998754
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=65.98 E-value=14 Score=23.78 Aligned_cols=29 Identities=17% Similarity=0.363 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCcEEEEEehHHHHHHHHHh
Q 026712 198 YRRLPVVDGYGKLVGLITRGNVVRAALQI 226 (234)
Q Consensus 198 ~~~vpVv~~~~~~vGiit~~dll~~l~~~ 226 (234)
...|-+++++|+-+|+++..+-++...+.
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~ 41 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARR 41 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHc
Confidence 45677999999999999999999876553
No 130
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=45.10 E-value=32 Score=22.03 Aligned_cols=26 Identities=23% Similarity=0.382 Sum_probs=21.8
Q ss_pred CCCeeEEEcCCCcEEEEEehHHHhhh
Q 026712 105 RITGFPVIDDDWKLVGVVSDYDLLAL 130 (234)
Q Consensus 105 ~~~~~pVvd~~~~~~Givt~~dl~~~ 130 (234)
+...+-+++++|..+|+++..+.++.
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHH
Confidence 34557788999999999999999875
No 131
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=43.30 E-value=9.9 Score=27.84 Aligned_cols=34 Identities=18% Similarity=0.321 Sum_probs=27.8
Q ss_pred HHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHHH
Q 026712 186 LEDAARLLLETKYRRLPVVDGYGKLVGLITRGNVV 220 (234)
Q Consensus 186 l~~~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll 220 (234)
+.+.++.+.+.|...+.|-. +|+++|+|...|.+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCC
Confidence 67778888888987777776 69999999988754
No 132
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=42.25 E-value=34 Score=20.42 Aligned_cols=34 Identities=12% Similarity=0.032 Sum_probs=25.4
Q ss_pred cCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEE
Q 026712 89 KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVV 122 (234)
Q Consensus 89 ~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Giv 122 (234)
-+.++++||+..|...+...+...|.+..-+.+|
T Consensus 10 ~kpmsveEAv~qmel~gh~F~vF~n~~t~~~nVv 43 (57)
T 3k2t_A 10 LKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIV 43 (57)
T ss_dssp -CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEE
Confidence 3568999999999999988888888653233444
No 133
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=41.28 E-value=41 Score=20.68 Aligned_cols=36 Identities=19% Similarity=0.073 Sum_probs=27.2
Q ss_pred cCCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEeh
Q 026712 89 KTTTTVDEALERLVEKRITGFPVIDDDWKLVGVVSD 124 (234)
Q Consensus 89 ~~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~ 124 (234)
-+.+|++||+..|...+.+.+...|.+..-+.+|-+
T Consensus 10 ~kpMsveEAv~qmel~gh~F~vF~n~etg~~nVVYR 45 (65)
T 3ka5_A 10 IKPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYK 45 (65)
T ss_dssp CSCBCHHHHHHHHHHHTCSEEEEEETTTTEEEEEEE
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEeCCCCCEEEEEE
Confidence 356899999999999898888888876444455543
No 134
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=40.67 E-value=64 Score=22.27 Aligned_cols=42 Identities=12% Similarity=0.172 Sum_probs=28.6
Q ss_pred HHHHHHHcCCCEEEEEcCCCcEEEE-EehHHHHHHHHHhhhhC
Q 026712 189 AARLLLETKYRRLPVVDGYGKLVGL-ITRGNVVRAALQIKRDG 230 (234)
Q Consensus 189 ~~~~m~~~~~~~vpVv~~~~~~vGi-it~~dll~~l~~~~~~~ 230 (234)
+.+.+.-.++..+.++|.+|++++. ++..++.+.+.+.....
T Consensus 101 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~l~~~l~~l~~~~ 143 (152)
T 2lrn_A 101 VLESYCIVGFPHIILVDPEGKIVAKELRGDDLYNTVEKFVNGA 143 (152)
T ss_dssp HHHHTTCCSSCEEEEECTTSEEEEECCCTTHHHHHHHHHHTSS
T ss_pred HHHHhCCCcCCeEEEECCCCeEEEeeCCHHHHHHHHHHHHhhc
Confidence 3333333445666789989999988 67888888777765543
No 135
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=35.46 E-value=21 Score=27.55 Aligned_cols=22 Identities=36% Similarity=0.471 Sum_probs=17.0
Q ss_pred CCCEEEEEcCCCcEEEEEehHH
Q 026712 197 KYRRLPVVDGYGKLVGLITRGN 218 (234)
Q Consensus 197 ~~~~vpVv~~~~~~vGiit~~d 218 (234)
|-+-=||+|.+|+++||-+..|
T Consensus 125 GdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 125 GDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp CSTTCEEEETTSCEEEEEEC--
T ss_pred CCCCCccCCCCCcEEEEEeccC
Confidence 4455699999999999998776
No 136
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=35.34 E-value=28 Score=24.01 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=17.2
Q ss_pred HHHHHHHHH-hCCCCeeEEEcCCCcE
Q 026712 94 VDEALERLV-EKRITGFPVIDDDWKL 118 (234)
Q Consensus 94 v~~a~~~~~-~~~~~~~pVvd~~~~~ 118 (234)
+...++.+. ..+...+.|.|.+|..
T Consensus 37 l~~~~~~~~~~~~~~~i~v~d~~G~~ 62 (131)
T 1p0z_A 37 IKALIDPMRSFSDATYITVGDASGQR 62 (131)
T ss_dssp HHHHHHHHHHHSCCSEEEEEETTSBE
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCcE
Confidence 444444444 4688899999998864
No 137
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=34.77 E-value=44 Score=20.60 Aligned_cols=34 Identities=15% Similarity=0.025 Sum_probs=25.7
Q ss_pred CCCCHHHHHHHHHhCCCCeeEEEcCCCcEEEEEe
Q 026712 90 TTTTVDEALERLVEKRITGFPVIDDDWKLVGVVS 123 (234)
Q Consensus 90 ~~~~v~~a~~~~~~~~~~~~pVvd~~~~~~Givt 123 (234)
+.+|++||+..|...+.+.+...|.+..-+.+|-
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n~etg~~nVVY 45 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTDSEDGATNILY 45 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEETTTCSEEEEE
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEeCCCCCEEEEE
Confidence 5678999999999999998888886533334443
No 138
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=33.94 E-value=30 Score=24.36 Aligned_cols=26 Identities=12% Similarity=0.023 Sum_probs=18.9
Q ss_pred CCHHHHHHHHH-hCCCCeeEEEcCCCc
Q 026712 92 TTVDEALERLV-EKRITGFPVIDDDWK 117 (234)
Q Consensus 92 ~~v~~a~~~~~-~~~~~~~pVvd~~~~ 117 (234)
..+...++.+. ..+...+.|.|.+|.
T Consensus 41 ~~l~~~~~~~~~~~~~~~i~v~d~~G~ 67 (142)
T 3by8_A 41 SGIQAIAEAVRKRNDLLFIVVTDMQSL 67 (142)
T ss_dssp CSHHHHHHHHHHHTTCSEEEEEETTCB
T ss_pred HHHHHHHHHHHhhcCCcEEEEECCCCc
Confidence 45677666665 467888999998873
No 139
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=30.60 E-value=33 Score=24.93 Aligned_cols=35 Identities=20% Similarity=0.456 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCCCeeEEEcCCCcEEEEEehHHHhh
Q 026712 94 VDEALERLVEKRITGFPVIDDDWKLVGVVSDYDLLA 129 (234)
Q Consensus 94 v~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~ 129 (234)
+.+..+.+...+...+.|-. +++++|+|...|.++
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCCC
Confidence 67777778888877777765 689999999888653
No 140
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=29.76 E-value=31 Score=25.21 Aligned_cols=22 Identities=18% Similarity=0.374 Sum_probs=18.0
Q ss_pred HcCCCEEEEEcCCCcEEEEEeh
Q 026712 195 ETKYRRLPVVDGYGKLVGLITR 216 (234)
Q Consensus 195 ~~~~~~vpVv~~~~~~vGiit~ 216 (234)
..|-+-=|++|.+|+++||.+.
T Consensus 123 ~pGnSGGPl~n~~G~VVGI~~~ 144 (163)
T 2w5e_A 123 QDGMSGAPVCDKYCRVLAVHQT 144 (163)
T ss_dssp SSCCTTCEEECTTSCEEEEEEE
T ss_pred CCCCchhhEEcCCCEEEEEEcc
Confidence 4566677999999999999864
No 141
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=28.37 E-value=32 Score=26.51 Aligned_cols=20 Identities=25% Similarity=0.316 Sum_probs=15.9
Q ss_pred CCCEEEEEcCCCcEEEEEeh
Q 026712 197 KYRRLPVVDGYGKLVGLITR 216 (234)
Q Consensus 197 ~~~~vpVv~~~~~~vGiit~ 216 (234)
|-.-=|++|.+|+++||++.
T Consensus 187 G~SGGPLv~~~G~vVGI~s~ 206 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTL 206 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeE
Confidence 44455899888999999875
No 142
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=26.84 E-value=1.3e+02 Score=20.59 Aligned_cols=52 Identities=6% Similarity=-0.181 Sum_probs=33.5
Q ss_pred EecCCCCHHHHHHHHH--HcCCCEEEEEcCCCcEEE----EEehHHHHHHHHHhhhhC
Q 026712 179 VVHENTNLEDAARLLL--ETKYRRLPVVDGYGKLVG----LITRGNVVRAALQIKRDG 230 (234)
Q Consensus 179 ~v~~~~~l~~~~~~m~--~~~~~~vpVv~~~~~~vG----iit~~dll~~l~~~~~~~ 230 (234)
....+....++.+.+. -.++....++|.+|+++. ..+..++.+.+.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 85 WRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp EEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred EecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3444555666666554 455667789998887654 567788887777665443
No 143
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=26.82 E-value=33 Score=26.50 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=16.5
Q ss_pred cCCCEEEEEcCCCcEEEEEeh
Q 026712 196 TKYRRLPVVDGYGKLVGLITR 216 (234)
Q Consensus 196 ~~~~~vpVv~~~~~~vGiit~ 216 (234)
.|-.-=|++|.+|+++||++.
T Consensus 173 ~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 173 HGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp TTCTTCEEECTTCCEEEEECC
T ss_pred CCCchHHeeCCCCeEEEEEee
Confidence 455556899988999999765
No 144
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=25.60 E-value=38 Score=24.12 Aligned_cols=22 Identities=27% Similarity=0.193 Sum_probs=16.0
Q ss_pred CeeEEEcCCCcEEEEEe-hHHHh
Q 026712 107 TGFPVIDDDWKLVGVVS-DYDLL 128 (234)
Q Consensus 107 ~~~pVvd~~~~~~Givt-~~dl~ 128 (234)
.+.||.|++|+++|+|. ..|+.
T Consensus 109 ~~~Pi~d~~G~~~G~vev~~Dit 131 (151)
T 2qkp_A 109 TYAAVRDQAGDFQGVLEYVQDIK 131 (151)
T ss_dssp EEEEEECTTCCEEEEEEEEEECG
T ss_pred EEEEEECCCCCEEEEEEEEEECH
Confidence 46788888899999883 44443
No 145
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=25.24 E-value=40 Score=26.42 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=16.7
Q ss_pred cCCCEEEEEcCCCcEEEEEeh
Q 026712 196 TKYRRLPVVDGYGKLVGLITR 216 (234)
Q Consensus 196 ~~~~~vpVv~~~~~~vGiit~ 216 (234)
.|-.-=|++|.+|+++||.+.
T Consensus 184 ~G~SGGPLvn~~G~vVGI~s~ 204 (245)
T 3sti_A 184 RGNSGGALLNLNGELIGINTA 204 (245)
T ss_dssp TTTTTSEEECTTSCEEEEEEC
T ss_pred CCcchhHeecCCCeEEEEEEe
Confidence 455566899988999999775
No 146
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=24.35 E-value=42 Score=25.78 Aligned_cols=21 Identities=19% Similarity=0.349 Sum_probs=16.6
Q ss_pred cCCCEEEEEcCCCcEEEEEeh
Q 026712 196 TKYRRLPVVDGYGKLVGLITR 216 (234)
Q Consensus 196 ~~~~~vpVv~~~~~~vGiit~ 216 (234)
.|-.-=|++|.+|+++||++.
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~ 200 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFG 200 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEE
T ss_pred CCccHHHEECCCCEEEEEEEe
Confidence 355556899878999999876
No 147
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=23.71 E-value=64 Score=22.20 Aligned_cols=49 Identities=27% Similarity=0.161 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHcCCCEEEEEcCCCcEEEE----EehHHHHHHHHHhhhhCCC
Q 026712 184 TNLEDAARLLLETKYRRLPVVDGYGKLVGL----ITRGNVVRAALQIKRDGER 232 (234)
Q Consensus 184 ~~l~~~~~~m~~~~~~~vpVv~~~~~~vGi----it~~dll~~l~~~~~~~~~ 232 (234)
....++.+.+.-.++..+.++|.+|++++. .+..++.+.+.+......+
T Consensus 96 ~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 148 (154)
T 3ia1_A 96 DRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLEG 148 (154)
T ss_dssp CCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC--
T ss_pred cchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcccc
Confidence 344555555544566777899988876554 5777888888777655443
No 148
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=23.16 E-value=42 Score=25.22 Aligned_cols=21 Identities=14% Similarity=0.373 Sum_probs=15.7
Q ss_pred cCCCEEEEEcCCCcEEEEEeh
Q 026712 196 TKYRRLPVVDGYGKLVGLITR 216 (234)
Q Consensus 196 ~~~~~vpVv~~~~~~vGiit~ 216 (234)
.|-.-=|+++.+|+++||++.
T Consensus 155 ~GdSGGPlv~~~g~lvGI~s~ 175 (210)
T 2as9_A 155 PGNSGSPVLNSNNEVIGVVYG 175 (210)
T ss_dssp TTCTTCEEECTTSCEEEEECC
T ss_pred CCCccCcEECCCCeEEEEEec
Confidence 344556888877899999874
No 149
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=22.30 E-value=50 Score=24.40 Aligned_cols=22 Identities=23% Similarity=0.468 Sum_probs=16.2
Q ss_pred cCCCEEEEEcCCCcEEEEEehH
Q 026712 196 TKYRRLPVVDGYGKLVGLITRG 217 (234)
Q Consensus 196 ~~~~~vpVv~~~~~~vGiit~~ 217 (234)
.|-.-=|+++.+|+++||++..
T Consensus 151 ~GdSGGPl~~~~g~lvGI~s~g 172 (200)
T 2w7s_A 151 PGNSGSPVLNSKHELIGILYAG 172 (200)
T ss_dssp TTCTTCEEECTTSCEEEEEEEE
T ss_pred CCCccCeEECcCCEEEEEEecc
Confidence 3445568888778999998863
No 150
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=22.09 E-value=41 Score=21.56 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=22.8
Q ss_pred HcCCCEEEEEc-CCCcEE-EEEehHHHHHHHHHhhh
Q 026712 195 ETKYRRLPVVD-GYGKLV-GLITRGNVVRAALQIKR 228 (234)
Q Consensus 195 ~~~~~~vpVv~-~~~~~v-Giit~~dll~~l~~~~~ 228 (234)
+.++. +|++- .+|+.+ |..+...|.+.+.+...
T Consensus 43 ~~g~~-vPtl~~~~G~~v~g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 43 AYGLR-VPVLRDPMGRELDWPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp HHTTT-CSEEECTTCCEEESCCCHHHHHHHHHTCC-
T ss_pred HhCCC-cCeEEEECCEEEeCCCCHHHHHHHHHHHHH
Confidence 45676 88776 678777 67888888887765433
No 151
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=22.07 E-value=1.1e+02 Score=20.29 Aligned_cols=45 Identities=11% Similarity=0.097 Sum_probs=29.6
Q ss_pred CHHHHHHHHHHcCCCEEEEEcCCCcEE----EEEehHHHHHHHHHhhhh
Q 026712 185 NLEDAARLLLETKYRRLPVVDGYGKLV----GLITRGNVVRAALQIKRD 229 (234)
Q Consensus 185 ~l~~~~~~m~~~~~~~vpVv~~~~~~v----Giit~~dll~~l~~~~~~ 229 (234)
.-.++.+.+.-.++..+.++|.+|+++ |..+..++.+.+.+....
T Consensus 74 ~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 74 EGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp THHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred chHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 345555555555666777887778655 556778888887776543
No 152
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=21.77 E-value=72 Score=18.75 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=21.3
Q ss_pred HHHHHHHcCCCEEEEEcCCCcEEEEEehHHHHHH
Q 026712 189 AARLLLETKYRRLPVVDGYGKLVGLITRGNVVRA 222 (234)
Q Consensus 189 ~~~~m~~~~~~~vpVv~~~~~~vGiit~~dll~~ 222 (234)
..+.+...+...+|++-.+|+.+|=.+...+.+.
T Consensus 39 ~~~~~~~~~~~~vP~l~~~g~~~~g~~~~~l~~~ 72 (75)
T 1r7h_A 39 ARDYVMALGYVQAPVVEVDGEHWSGFRPERIKQL 72 (75)
T ss_dssp HHHHHHHTTCBCCCEEEETTEEEESCCHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEECCeEEcCCCHHHHHHH
Confidence 3444566888889876546776654566555443
No 153
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=21.36 E-value=1.6e+02 Score=20.15 Aligned_cols=44 Identities=9% Similarity=0.002 Sum_probs=29.3
Q ss_pred HHHHHHHHcCCCEEEEEcCCCcEEE----EEehHHHHHHHHHhhhhCC
Q 026712 188 DAARLLLETKYRRLPVVDGYGKLVG----LITRGNVVRAALQIKRDGE 231 (234)
Q Consensus 188 ~~~~~m~~~~~~~vpVv~~~~~~vG----iit~~dll~~l~~~~~~~~ 231 (234)
++.+.+.-.++....++|.+|+++. ..+..++.+.+.+...+..
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~~~ 155 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGEAA 155 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTSCC
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhccCC
Confidence 3444444456667779998897655 4577778888777765544
No 154
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=20.25 E-value=59 Score=23.95 Aligned_cols=19 Identities=26% Similarity=0.431 Sum_probs=14.4
Q ss_pred CEEEEEcCCCcEEEEEehH
Q 026712 199 RRLPVVDGYGKLVGLITRG 217 (234)
Q Consensus 199 ~~vpVv~~~~~~vGiit~~ 217 (234)
.-=|+++.+|+++||++..
T Consensus 157 SGGPl~~~~g~lvGI~s~g 175 (204)
T 2vid_A 157 SGSPVLNSNNELVGIHFAS 175 (204)
T ss_dssp TTCEEECTTSCEEEEEEEE
T ss_pred ccCcEECCCCeEEEEEecC
Confidence 3458888778999998753
Done!