Your job contains 1 sequence.
>026716
MDGREAMVASGGVSGPYYIQQHRGAFSGSHSATQSGLMQTPPGFRSSSNLNIPTQPNVGS
TFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQVSLGLSPLPARPKRSPAS
DSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGERPRVVCILSGRGT
VSSVTLRQPATSVPTVTYEVEALCLYLFLFWKKKIHQKNFHFCTLPFLCLLLVP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026716
(234 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2031321 - symbol:AT1G63470 species:3702 "Arabi... 412 1.6e-49 2
TAIR|locus:2031306 - symbol:AT1G63480 species:3702 "Arabi... 389 4.4e-36 1
TAIR|locus:2050766 - symbol:AT2G45850 species:3702 "Arabi... 335 2.3e-30 1
TAIR|locus:2098861 - symbol:AT3G61310 species:3702 "Arabi... 302 7.3e-27 1
TAIR|locus:2051038 - symbol:AT2G33620 species:3702 "Arabi... 264 7.8e-23 1
TAIR|locus:2122684 - symbol:AHL3 "AT-HOOK MOTIF NUCLEAR L... 149 4.7e-15 2
TAIR|locus:2141045 - symbol:AT4G17950 species:3702 "Arabi... 156 1.5e-14 2
TAIR|locus:2153142 - symbol:AHL4 "AT-HOOK MOTIF NUCLEAR L... 144 2.1e-14 2
TAIR|locus:2178505 - symbol:AT5G46640 species:3702 "Arabi... 172 2.0e-12 1
TAIR|locus:2084983 - symbol:AT3G04590 species:3702 "Arabi... 166 8.4e-11 1
TAIR|locus:2132599 - symbol:AT4G22770 species:3702 "Arabi... 159 6.7e-10 1
TAIR|locus:2167988 - symbol:AT5G62260 species:3702 "Arabi... 118 1.3e-09 2
TAIR|locus:2126946 - symbol:AT4G00200 species:3702 "Arabi... 152 5.2e-09 1
TAIR|locus:2118091 - symbol:AHL1 "AT-hook motif nuclear-l... 152 7.0e-09 1
TAIR|locus:2084958 - symbol:AHL19 "AT-hook motif nuclear-... 121 3.4e-05 1
TAIR|locus:2011701 - symbol:SOB3 "SUPPRESSOR OF PHYB-4#3"... 109 0.00082 1
TAIR|locus:2037350 - symbol:ESC "ESCAROLA" species:3702 "... 109 0.00087 1
>TAIR|locus:2031321 [details] [associations]
symbol:AT1G63470 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0000226 "microtubule cytoskeleton organization" evidence=RCA]
[GO:0000280 "nuclear division" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007000 "nucleolus organization" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0031048 "chromatin silencing by small
RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684 GO:GO:0003677
InterPro:IPR005175 Pfam:PF03479 eggNOG:NOG246569 EMBL:BT005545
EMBL:AK118329 EMBL:BR000341 IPI:IPI00536298 RefSeq:NP_176536.2
UniGene:At.36125 UniGene:At.73033 ProteinModelPortal:Q8GXB3
IntAct:Q8GXB3 STRING:Q8GXB3 PaxDb:Q8GXB3 PRIDE:Q8GXB3
EnsemblPlants:AT1G63470.1 GeneID:842653 KEGG:ath:AT1G63470
TAIR:At1g63470 InParanoid:Q8GXB3 OMA:EPTNSEM PhylomeDB:Q8GXB3
ProtClustDB:CLSN2690476 ArrayExpress:Q8GXB3 Genevestigator:Q8GXB3
Uniprot:Q8GXB3
Length = 378
Score = 412 (150.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 86/135 (63%), Positives = 101/135 (74%)
Query: 82 PLSDP-VKKKRGRPRKYAPDGQVSLGLSPLPARPKRSP----ASDSQALKRSRGRPPGTG 136
P P VKKKRGRPRKY PDGQVSLGLSP+P K+S SD A KR+RGRPPGTG
Sbjct: 98 PSEQPMVKKKRGRPRKYVPDGQVSLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTG 157
Query: 137 RKQQLATLGEWMNSSAGIAFAPHVISIGVGE------------RPRVVCILSGRGTVSSV 184
RKQ+LA LGEWMN+SAG+AFAPHVIS+G GE RPR +CI+SG GTVSSV
Sbjct: 158 RKQRLANLGEWMNTSAGLAFAPHVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSV 217
Query: 185 TLRQPATSVPTVTYE 199
TLR+PA++ P++T+E
Sbjct: 218 TLREPASTTPSLTFE 232
Score = 121 (47.7 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 36/88 (40%), Positives = 47/88 (53%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGAFSG-SHSATQSGLMQTPP--GFRSSSNLNI--PTQ 55
MDGREAM G S +Y+Q RG F+ + S SGL PP G R SN NI P
Sbjct: 1 MDGREAMAFPGSHS-QFYLQ--RGVFTNLTPSQVASGLHAPPPPPGMRPMSNPNIHHPQA 57
Query: 56 PNVGSTFAV-EPKHVNFGHNMSVPSGVP 82
N G F++ E +H +FGH++ + P
Sbjct: 58 SNPGPPFSMAEHRHSDFGHSIHMGMASP 85
>TAIR|locus:2031306 [details] [associations]
symbol:AT1G63480 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506
eggNOG:NOG246569 ProtClustDB:CLSN2690476 EMBL:AY096576
EMBL:BR000348 IPI:IPI00529016 RefSeq:NP_176537.2 UniGene:At.28375
ProteinModelPortal:Q8LPN5 IntAct:Q8LPN5 EnsemblPlants:AT1G63480.1
GeneID:842654 KEGG:ath:AT1G63480 TAIR:At1g63480 InParanoid:Q8LPN5
OMA:GARAKTH PhylomeDB:Q8LPN5 Genevestigator:Q8LPN5 Uniprot:Q8LPN5
Length = 361
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 108/227 (47%), Positives = 130/227 (57%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGAFSG-SHSATQSGLMQTPP--GFRSSSNLNI--PTQ 55
MDGREAM G S YY+Q RGAF+ + S SGL PP G R SN NI P
Sbjct: 1 MDGREAMAFPGSHS-QYYLQ--RGAFTNLAPSQVASGLHAPPPHTGLRPMSNPNIHHPQA 57
Query: 56 PNVGSTFAVEPKHVNFGHNMSV--------PSGVPLSDP-VKKKRGRPRKYAPDGQVSLG 106
N G F+ ++ G S P P +P VK+KRGRPRKY G+
Sbjct: 58 NNPGPPFSDFGHTIHMGVVSSASDADVQPPPPPPPPEEPMVKRKRGRPRKY---GE---- 110
Query: 107 LSPLPARPKR--SPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIG 164
P+ + R SP SD KR+RGRPPGTGRKQ+LA LGEWMN+SAG+AFAPHVISIG
Sbjct: 111 --PMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAGLAFAPHVISIG 168
Query: 165 VGE------------RPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 199
GE RPR +CI+SG GT+SSVTL +P ++ +TYE
Sbjct: 169 AGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYE 215
>TAIR|locus:2050766 [details] [associations]
symbol:AT2G45850 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 EMBL:AC004665
InterPro:IPR005175 Pfam:PF03479 UniGene:At.12707 UniGene:At.48596
HOGENOM:HOG000116506 EMBL:AF367271 EMBL:AY059157 EMBL:AY062699
EMBL:AY114678 EMBL:BR000345 IPI:IPI00548851 PIR:T02462
RefSeq:NP_182109.1 RefSeq:NP_850442.1 ProteinModelPortal:O80834
SMR:O80834 IntAct:O80834 PaxDb:O80834 PRIDE:O80834
EnsemblPlants:AT2G45850.1 EnsemblPlants:AT2G45850.2 GeneID:819193
KEGG:ath:AT2G45850 TAIR:At2g45850 eggNOG:NOG246569
InParanoid:O80834 OMA:TITPNNS PhylomeDB:O80834
ProtClustDB:CLSN2683445 ArrayExpress:O80834 Genevestigator:O80834
Uniprot:O80834
Length = 348
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 95/228 (41%), Positives = 122/228 (53%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGAFSGSHSATQSGLMQTPPGFRSSSNLNIPT------ 54
MD R+AM SG SG YYI HRG SGS T G Q G R N N P
Sbjct: 1 MDRRDAMGLSG--SGSYYI--HRG-LSGSGPPTFHGSPQQQQGLRHLPNQNSPFGSGSTG 55
Query: 55 --QPNV-G----STFA----VEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQV 103
P++ G +T A P H+ G NM P P P+K+KRGRPRKY DG V
Sbjct: 56 FGSPSLHGDPSLATAAGGAGALPHHI--GVNMIAPPPPPSETPMKRKRGRPRKYGQDGSV 113
Query: 104 SLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISI 163
SL LS S + + + KR RGRPPG+G+KQ++A++GE M SS+G++F PHVI++
Sbjct: 114 SLALSSSSV----STITPNNSNKRGRGRPPGSGKKQRMASVGELMPSSSGMSFTPHVIAV 169
Query: 164 GVGER------------PRVVCILSGRGTVSSVTLRQPATSVPTVTYE 199
+GE PR +C+LS G VS+ TL QP+ S + YE
Sbjct: 170 SIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAIKYE 217
>TAIR|locus:2098861 [details] [associations]
symbol:AT3G61310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 InterPro:IPR005175
Pfam:PF03479 HOGENOM:HOG000116506 ProtClustDB:CLSN2683445
EMBL:AY128386 EMBL:BT008837 EMBL:BR000347 IPI:IPI00541455
RefSeq:NP_191690.2 UniGene:At.48793 UniGene:At.65801
UniGene:At.71203 ProteinModelPortal:Q8L7L5 IntAct:Q8L7L5
PaxDb:Q8L7L5 PRIDE:Q8L7L5 EnsemblPlants:AT3G61310.1 GeneID:825303
KEGG:ath:AT3G61310 TAIR:At3g61310 eggNOG:NOG291819
InParanoid:Q8L7L5 OMA:SSIGEMM PhylomeDB:Q8L7L5 ArrayExpress:Q8L7L5
Genevestigator:Q8L7L5 Uniprot:Q8L7L5
Length = 354
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 94/229 (41%), Positives = 119/229 (51%)
Query: 1 MDGREAMVASGGVSGPYYIQQHRGA-FSGSHSATQSGLMQTPPGFRSSSNLNIP------ 53
MD R+AM SG SG YYIQ RG SG GF +N P
Sbjct: 1 MDRRDAMALSG--SGSYYIQ--RGIPGSGPPPPQTQPTFHGSQGFHHFTNSISPFGSNPN 56
Query: 54 TQPNVG--ST-FAVEPKHVNFG--HNMSVPSGVPLSDP-----VKKKRGRPRKYAPDG-Q 102
PN G ST F P V+ + + +G ++ P VK+KRGRPRKY DG
Sbjct: 57 PNPNPGGVSTGFVSPPLPVDSSPADSSAAAAGALVAPPSGDTSVKRKRGRPRKYGQDGGS 116
Query: 103 VSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVIS 162
VSL LSP + SP S+ KR RGRPPG+G+KQ+L+++GE M SS G++F PHVI
Sbjct: 117 VSLALSPSISNV--SPNSN----KRGRGRPPGSGKKQRLSSIGEMMPSSTGMSFTPHVIV 170
Query: 163 IGVGER------------PRVVCILSGRGTVSSVTLRQPATSVPTVTYE 199
+ +GE PR +C+LS G VS+ TL QPA S T+ YE
Sbjct: 171 VSIGEDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYE 219
>TAIR|locus:2051038 [details] [associations]
symbol:AT2G33620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0048438 "floral whorl development" evidence=RCA]
[GO:0048439 "flower morphogenesis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 EMBL:AC002332 InterPro:IPR005175 Pfam:PF03479
EMBL:AY081729 EMBL:BR000346 IPI:IPI00516597 PIR:G84747
RefSeq:NP_001118437.1 RefSeq:NP_565769.1 RefSeq:NP_850215.1
RefSeq:NP_973590.1 UniGene:At.48546 UniGene:At.49689
UniGene:At.64420 ProteinModelPortal:O22812 SMR:O22812 STRING:O22812
PaxDb:O22812 PRIDE:O22812 EnsemblPlants:AT2G33620.1
EnsemblPlants:AT2G33620.2 EnsemblPlants:AT2G33620.3
EnsemblPlants:AT2G33620.4 GeneID:817928 KEGG:ath:AT2G33620
TAIR:At2g33620 eggNOG:NOG315719 HOGENOM:HOG000116506
InParanoid:O22812 OMA:SENGGHR PhylomeDB:O22812
ProtClustDB:CLSN2688664 ArrayExpress:O22812 Genevestigator:O22812
Uniprot:O22812
Length = 351
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 63/131 (48%), Positives = 81/131 (61%)
Query: 84 SDPVKKKRGRPRKYAPD-GQVSLGLSP-LPARPKRSPASDSQALKRSRGRPPGTGRKQ-Q 140
S+PVKK+RGRPRKY PD G++SLGL+P P+ P+S ++ RGRPPG+ K+ +
Sbjct: 93 SEPVKKRRGRPRKYGPDSGEMSLGLNPGAPSFTVSQPSSGGDGGEKKRGRPPGSSSKRLK 152
Query: 141 LATLGEWMNSSAGIAFAPHVISIGVGER------------PRVVCILSGRGTVSSVTLRQ 188
L LG S GI F PHV+++ GE PR VC+LS G +S+VTLRQ
Sbjct: 153 LQALG-----STGIGFTPHVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQ 207
Query: 189 PATSVPTVTYE 199
ATS TVTYE
Sbjct: 208 SATSGGTVTYE 218
>TAIR|locus:2122684 [details] [associations]
symbol:AHL3 "AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010089 "xylem development" evidence=IMP] InterPro:IPR017956
SMART:SM00384 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161563 InterPro:IPR005175 Pfam:PF03479 EMBL:AL035396
HOGENOM:HOG000116506 ProtClustDB:CLSN2685677 EMBL:AY099572
EMBL:BT003408 EMBL:BR000339 IPI:IPI00535403 PIR:T05553
RefSeq:NP_194262.1 UniGene:At.2582 ProteinModelPortal:Q9SB31
SMR:Q9SB31 IntAct:Q9SB31 PaxDb:Q9SB31 PRIDE:Q9SB31
EnsemblPlants:AT4G25320.1 GeneID:828635 KEGG:ath:AT4G25320
TAIR:At4g25320 eggNOG:NOG313609 InParanoid:Q9SB31 OMA:TSEFPPR
PhylomeDB:Q9SB31 Genevestigator:Q9SB31 Uniprot:Q9SB31
Length = 404
Score = 149 (57.5 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 51/183 (27%), Positives = 80/183 (43%)
Query: 1 MDGREAMVASGGVSGPYYI-QQHRGAFS-GSHSATQSGLMQTPPGFRSSSNLNIP--TQP 56
M+ RE + ++ + + QQH A S G +S M PP + + +P T P
Sbjct: 1 MEEREGTNINNNITSSFGLKQQHEAAASDGGYS------MDPPPRPENPNPFLVPPTTVP 54
Query: 57 NVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQVSLGLSPLPARPKR 116
+ A ++ ++++P+ ++ +KKKRGRPRKY PDG + + LSP+P
Sbjct: 55 AAATVAAAVTENAATPFSLTMPTENTSAEQLKKKRGRPRKYNPDGTLVVTLSPMPISSSV 114
Query: 117 SPASDSQALKRSRGRPPGTG--RKQQLATL----------GEWMNSSAGIAFAPHVISIG 164
S+ KR RGR +K Q+ G G F PHV+ +
Sbjct: 115 PLTSEFPPRKRGRGRGKSNRWLKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVN 174
Query: 165 VGE 167
GE
Sbjct: 175 AGE 177
Score = 98 (39.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 153 GIAFAPHVISIGVGER------------PRVVCILSGRGTVSSVTLRQPATSVPTVTYE 199
G F PHV+ + GE R +CILS G +S+VTLRQ TS T+TYE
Sbjct: 163 GANFTPHVLIVNAGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYE 221
>TAIR|locus:2141045 [details] [associations]
symbol:AT4G17950 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017956 Pfam:PF02178 SMART:SM00384 GO:GO:0005829
EMBL:CP002687 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
EMBL:AY054610 EMBL:AY081495 EMBL:BR000349 IPI:IPI00547973
RefSeq:NP_567546.1 UniGene:At.119 ProteinModelPortal:Q940I0
SMR:Q940I0 IntAct:Q940I0 PRIDE:Q940I0 EnsemblPlants:AT4G17950.1
GeneID:827520 KEGG:ath:AT4G17950 TAIR:At4g17950 InParanoid:Q940I0
OMA:MGHNTST PhylomeDB:Q940I0 ProtClustDB:CLSN2686193
Genevestigator:Q940I0 Uniprot:Q940I0
Length = 439
Score = 156 (60.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 42/95 (44%), Positives = 53/95 (55%)
Query: 119 ASDSQALKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGER---------- 168
+SD A KR+RGRPPG+G+KQ L LG + G+ F PHVI + GE
Sbjct: 190 SSDPPA-KRNRGRPPGSGKKQ-LDALG----GTGGVGFTPHVIEVKTGEDIATKILAFTN 243
Query: 169 --PRVVCILSGRGTVSSVTLRQPATSVPTVTYEVE 201
PR +CILS G V++V LRQ S PT T + E
Sbjct: 244 QGPRAICILSATGAVTNVMLRQANNSNPTGTVKYE 278
Score = 84 (34.6 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 37/120 (30%), Positives = 48/120 (40%)
Query: 6 AMVASGGVSGPYYIQQHRGAFSGSHSATQSGLMQTPPGFRSSSNLNIPTQPNVGSTFAVE 65
A V G + R F GS S Q Q + ++ T ++G F
Sbjct: 53 AAVLMGHNTSTSQAMHQRLPFGGSMSPHQPQQHQYHHP-QPQQQIDQKTLESLG--FDGS 109
Query: 66 PKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDG--------QVSLGLSPLPARPKRS 117
P V S+ G+ VKKKRGRPRKYA DG ++LGL+P P S
Sbjct: 110 PSSVAATQQHSMRFGID-HQQVKKKRGRPRKYAADGGGGGGGGSNIALGLAPTSPLPSAS 168
Score = 50 (22.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 29/109 (26%), Positives = 45/109 (41%)
Query: 39 QTPPGFRSSSNLNIPTQPNVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKY- 97
Q PPG S + + PN + AV H N + ++ +P + + + +Y
Sbjct: 32 QPPPGMLMSHHNSYNRNPNAAA--AVLMGH-NTSTSQAMHQRLPFGGSMSPHQPQQHQYH 88
Query: 98 --APDGQV------SLGL--SP--LPARPKRSP--ASDSQALKRSRGRP 132
P Q+ SLG SP + A + S D Q +K+ RGRP
Sbjct: 89 HPQPQQQIDQKTLESLGFDGSPSSVAATQQHSMRFGIDHQQVKKKRGRP 137
>TAIR|locus:2153142 [details] [associations]
symbol:AHL4 "AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 4"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010089 "xylem
development" evidence=IMP] InterPro:IPR017956 SMART:SM00384
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 EMBL:AB018109
InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506 EMBL:AB493788
EMBL:BR000340 IPI:IPI00523440 RefSeq:NP_199972.1 UniGene:At.46739
ProteinModelPortal:Q9FHM5 SMR:Q9FHM5 PaxDb:Q9FHM5 PRIDE:Q9FHM5
EnsemblPlants:AT5G51590.1 GeneID:835233 KEGG:ath:AT5G51590
TAIR:At5g51590 eggNOG:NOG322801 InParanoid:Q9FHM5 OMA:HEPSTNT
PhylomeDB:Q9FHM5 ProtClustDB:CLSN2685677 Genevestigator:Q9FHM5
Uniprot:Q9FHM5
Length = 419
Score = 144 (55.7 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 42/102 (41%), Positives = 54/102 (52%)
Query: 41 PPGFRS-SSNLNI-PT-QPNVGSTFA-VEPKHVNFGHNMSVPSGVP-LSDPVKKKRGRPR 95
PPG+ S N N+ P Q + S A V+P N S+ V S +KKKRGRPR
Sbjct: 27 PPGYPPRSENPNLFPVGQSSTSSAAAAVKPSE-NVAPPFSLTMPVENSSSELKKKRGRPR 85
Query: 96 KYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGR 137
KY PDG +++ LSP+P S+ + KR RGR G GR
Sbjct: 86 KYNPDGSLAVTLSPMPISSSVPLTSEFGSRKRGRGRGRGRGR 127
Score = 99 (39.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 155 AFAPHVISIGVGER------------PRVVCILSGRGTVSSVTLRQPATSVPTVTYE 199
+F PHV+++ GE R +CILS G +S+VTLRQ TS T+TYE
Sbjct: 177 SFTPHVLTVNAGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYE 233
>TAIR|locus:2178505 [details] [associations]
symbol:AT5G46640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR017956 Pfam:PF02178 SMART:SM00384
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 EMBL:AB016882
InterPro:IPR005175 Pfam:PF03479 eggNOG:NOG315719
HOGENOM:HOG000116506 ProtClustDB:CLSN2686193 EMBL:BT015318
EMBL:BT015755 EMBL:AB493779 EMBL:BR000344 IPI:IPI00530307
RefSeq:NP_199476.1 UniGene:At.29940 ProteinModelPortal:Q9FIR1
SMR:Q9FIR1 PaxDb:Q9FIR1 PRIDE:Q9FIR1 EnsemblPlants:AT5G46640.1
GeneID:834707 KEGG:ath:AT5G46640 TAIR:At5g46640 InParanoid:Q9FIR1
OMA:DIASKVM PhylomeDB:Q9FIR1 Genevestigator:Q9FIR1 Uniprot:Q9FIR1
Length = 386
Score = 172 (65.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 44/98 (44%), Positives = 56/98 (57%)
Query: 87 VKKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQA-----------------LKRSR 129
VKKKRGRPRKY PDG ++LGL+P P S AS+S +KR+R
Sbjct: 101 VKKKRGRPRKYTPDGSIALGLAP--TSPLLSAASNSYGEGGVGDSGGNGNSVDPPVKRNR 158
Query: 130 GRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGE 167
GRPPG+ +KQ L LG ++G+ F PHVI + GE
Sbjct: 159 GRPPGSSKKQ-LDALG----GTSGVGFTPHVIEVNTGE 191
Score = 145 (56.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 38/87 (43%), Positives = 48/87 (55%)
Query: 125 LKRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGER------------PRVV 172
+KR+RGRPPG+ +KQ L LG ++G+ F PHVI + GE R +
Sbjct: 154 VKRNRGRPPGSSKKQ-LDALG----GTSGVGFTPHVIEVNTGEDIASKVMAFSDQGSRTI 208
Query: 173 CILSGRGTVSSVTLRQPATSVPTVTYE 199
CILS G VS V LRQ + S VTYE
Sbjct: 209 CILSASGAVSRVMLRQASHSSGIVTYE 235
Score = 46 (21.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 19/56 (33%), Positives = 25/56 (44%)
Query: 40 TPPGFRSSSNLNI-PTQPNVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRP 94
TP G S L + PT P + A + G S +G + PVK+ RGRP
Sbjct: 112 TPDG---SIALGLAPTSPLLS---AASNSYGEGGVGDSGGNGNSVDPPVKRNRGRP 161
>TAIR|locus:2084983 [details] [associations]
symbol:AT3G04590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017956 Pfam:PF02178 SMART:SM00384
EMBL:CP002686 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
EMBL:BT029764 EMBL:AB493600 IPI:IPI00529282 RefSeq:NP_187109.2
UniGene:At.19818 ProteinModelPortal:A1L4X7 SMR:A1L4X7 PRIDE:A1L4X7
EnsemblPlants:AT3G04590.2 GeneID:819615 KEGG:ath:AT3G04590
TAIR:At3g04590 OMA:GHESSEN PhylomeDB:A1L4X7 Genevestigator:Q3E6V9
Uniprot:A1L4X7
Length = 411
Score = 166 (63.5 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 57/164 (34%), Positives = 78/164 (47%)
Query: 55 QPNVGST-FAVEPKHVNFGHNMSVPSGVPLS--DPVKKKRGRPRKYAPDGQVSLGLSPLP 111
QPN GS+ AV P H SVPS + +PVK+KRGRPRKY Q +L L
Sbjct: 77 QPNDGSSSLAVYP------H--SVPSSAVTAPMEPVKRKRGRPRKYVTPEQ-ALAAKKLA 127
Query: 112 ARPKRSPASDSQALKRSRGRP----PGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGE 167
+ S A + L G G+ +K QL ++G+ G F PH+++I GE
Sbjct: 128 SSASSSSAKQRRELAAVTGGTVSTNSGSSKKSQLGSVGK-----TGQCFTPHIVNIAPGE 182
Query: 168 ------------RPRVVCILSGRGTVSSVTLRQPATSVPTVTYE 199
+C+LS GT+S+ +LRQPA S + YE
Sbjct: 183 DVVQKIMMFANQSKHELCVLSASGTISNASLRQPAPSGGNLPYE 226
>TAIR|locus:2132599 [details] [associations]
symbol:AT4G22770 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR017956 SMART:SM00384 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161558 EMBL:AL021635
InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506 EMBL:AY084893
EMBL:BT026450 EMBL:AB493692 EMBL:BR000338 IPI:IPI00530161
PIR:T04572 RefSeq:NP_194008.1 UniGene:At.32499 UniGene:At.70599
ProteinModelPortal:O49658 SMR:O49658 PRIDE:O49658
EnsemblPlants:AT4G22770.1 GeneID:828376 KEGG:ath:AT4G22770
TAIR:At4g22770 eggNOG:NOG255062 InParanoid:O49658 OMA:ADHRTIR
PhylomeDB:O49658 ProtClustDB:CLSN2685830 ArrayExpress:O49658
Genevestigator:O49658 Uniprot:O49658
Length = 334
Score = 159 (61.0 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 44/116 (37%), Positives = 59/116 (50%)
Query: 84 SDPVKKKRGRPRKYAPDGQVSLGLSPLP---ARPKRSPASDSQALKRSRGR-PPGTGR-- 137
S P+KK+RGRPRKY DG ++ LSP P A P S D RG+ P T
Sbjct: 68 SGPIKKRRGRPRKYGHDG-AAVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPS 126
Query: 138 -----KQQLATLGEWMNSSAGIAFAPHVISIGVGE--RPRVVCILSGRGTVSSVTL 186
K Q+ LGEW SSA F PH+I++ GE R++ S +G+++ L
Sbjct: 127 SFIRPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISF-SQQGSLAICVL 181
Score = 139 (54.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 138 KQQLATLGEWMNSSAGIAFAPHVISIGVGE--RPRVV----------CILSGRGTVSSVT 185
K Q+ LGEW SSA F PH+I++ GE R++ C+L G VSSVT
Sbjct: 132 KYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSSVT 191
Query: 186 LRQPATSVPTVTYE 199
LRQP +S T+TYE
Sbjct: 192 LRQPDSSGGTLTYE 205
>TAIR|locus:2167988 [details] [associations]
symbol:AT5G62260 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR017956 Pfam:PF02178
SMART:SM00384 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB019235 InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506
EMBL:BT005681 EMBL:AK118328 EMBL:BR000342 IPI:IPI00545024
RefSeq:NP_201032.2 UniGene:At.29059 ProteinModelPortal:Q9LVB0
SMR:Q9LVB0 IntAct:Q9LVB0 PRIDE:Q9LVB0 EnsemblPlants:AT5G62260.1
GeneID:836347 KEGG:ath:AT5G62260 TAIR:At5g62260 eggNOG:NOG283759
InParanoid:Q9LVB0 PhylomeDB:Q9LVB0 ProtClustDB:CLSN2918888
ArrayExpress:Q9LVB0 Genevestigator:Q9LVB0 Uniprot:Q9LVB0
Length = 404
Score = 118 (46.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 37/97 (38%), Positives = 47/97 (48%)
Query: 44 FRSSSNLNIPTQPNVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRPRKYAPDGQV 103
F S + + P P + A P V G + + +G SDP KKKRGRPRKYAPDG
Sbjct: 36 FVSPTTVVTPLPPPPAPSSAPVPTTVTPG-SATASTG---SDPTKKKRGRPRKYAPDGS- 90
Query: 104 SLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQ 140
L+P RP SP S ++ S G+ QQ
Sbjct: 91 ---LNPRFLRPTLSPTPISSSIPLSGDYQWKRGKAQQ 124
Score = 85 (35.0 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 170 RVVCILSGRGTVSSVTLRQPATSVPTVTYE 199
R +CILS G++S+VTL QP + T+TYE
Sbjct: 186 RAICILSATGSISNVTLGQPTNAGGTLTYE 215
>TAIR|locus:2126946 [details] [associations]
symbol:AT4G00200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 InterPro:IPR005175
Pfam:PF03479 HOGENOM:HOG000116506 EMBL:BT023416 EMBL:AK228631
IPI:IPI00518846 RefSeq:NP_191931.2 UniGene:At.34588
ProteinModelPortal:Q4V3E0 SMR:Q4V3E0 PRIDE:Q4V3E0
EnsemblPlants:AT4G00200.1 GeneID:828162 KEGG:ath:AT4G00200
TAIR:At4g00200 OMA:SATDINI PhylomeDB:Q4V3E0 ProtClustDB:CLSN2920282
Genevestigator:Q4V3E0 Uniprot:Q4V3E0
Length = 318
Score = 152 (58.6 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 43/124 (34%), Positives = 59/124 (47%)
Query: 88 KKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRKQQLATLGEW 147
KK+RGRPRKY +G L S +P KR + + + G + +G
Sbjct: 56 KKRRGRPRKYEANG-APLPSSSVPLVKKRVRGKLNGFDMKKMHKTIGFHSSGERFGVGGG 114
Query: 148 MNSSAGIAFAPHVISIGVGER------------PRVVCILSGRGTVSSVTLRQPATSVPT 195
+ G F PHVI++ GE PR +CILS G +S+VTLRQP + T
Sbjct: 115 VGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQPDSCGGT 174
Query: 196 VTYE 199
+TYE
Sbjct: 175 LTYE 178
>TAIR|locus:2118091 [details] [associations]
symbol:AHL1 "AT-hook motif nuclear-localized protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 GO:GO:0005739 EMBL:CP002687
GO:GO:0005730 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
HOGENOM:HOG000116506 ProtClustDB:CLSN2685830 EMBL:AY070738
EMBL:AY149932 EMBL:AB284367 IPI:IPI00521294 RefSeq:NP_192945.2
UniGene:At.28340 ProteinModelPortal:Q8VYJ2 SMR:Q8VYJ2 IntAct:Q8VYJ2
PaxDb:Q8VYJ2 PRIDE:Q8VYJ2 EnsemblPlants:AT4G12080.1 GeneID:826816
KEGG:ath:AT4G12080 TAIR:At4g12080 eggNOG:NOG314683
InParanoid:Q8VYJ2 OMA:ADHRTIH PhylomeDB:Q8VYJ2
Genevestigator:Q8VYJ2 Uniprot:Q8VYJ2
Length = 356
Score = 152 (58.6 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 65/197 (32%), Positives = 87/197 (44%)
Query: 29 SHSATQSGLMQTPPGFRSSSN------LNIPTQPNVGSTFAVEPKHVNFGHNMSVPSGVP 82
S S+ QS TPP + SS+ L I T +T A+E ++ G M G P
Sbjct: 39 SESSNQSPTSVTPPPPQPSSHHTAPPPLQISTVTTTTTTAAMEG--IS-GGLMKKKRGRP 95
Query: 83 LS-DP---VKKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRPPGTGRK 138
P V +P AP S LP P S + KRS+ +P + +
Sbjct: 96 RKYGPDGTVVALSPKPISSAP------APSHLPP-PSSHVIDFSASEKRSKVKPTNSFNR 148
Query: 139 ----QQLATLGEWMNSSAGIAFAPHVISIGVGER------------PRVVCILSGRGTVS 182
Q+ LGEW S G F PH+I++ GE PR +C+LS G +S
Sbjct: 149 TKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVIS 208
Query: 183 SVTLRQPATSVPTVTYE 199
SVTLRQP +S T+TYE
Sbjct: 209 SVTLRQPDSSGGTLTYE 225
>TAIR|locus:2084958 [details] [associations]
symbol:AHL19 "AT-hook motif nuclear-localized protein 19"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0000041 "transition metal ion transport"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0050832
GO:GO:0003677 EMBL:AC011437 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 UniGene:At.40820
eggNOG:NOG328801 EMBL:AY085572 EMBL:BT005882 EMBL:AK228206
EMBL:BR000355 IPI:IPI00516612 RefSeq:NP_566232.1
ProteinModelPortal:Q9SR17 STRING:Q9SR17 PaxDb:Q9SR17 PRIDE:Q9SR17
EnsemblPlants:AT3G04570.1 GeneID:819613 KEGG:ath:AT3G04570
TAIR:At3g04570 InParanoid:Q9SR17 OMA:PNALKSH PhylomeDB:Q9SR17
ProtClustDB:CLSN2917091 Genevestigator:Q9SR17 Uniprot:Q9SR17
Length = 315
Score = 121 (47.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 48/160 (30%), Positives = 69/160 (43%)
Query: 35 SGLMQTPPGFRSSSNLNIPTQPNVGSTFAVEPKHVNFGHNMSVPSGVPLSDPVKKKRGRP 94
SGL TPPG SS L P ++ A++ H N H+ V + D R
Sbjct: 13 SGLETTPPG---SSQLKKPDL-HISMNMAMDSGHNNHHHHQEVDNNNNDDD-------RD 61
Query: 95 RKYAPDGQVSLGLSPLPAR-PKRSPASDSQALKRSRGRPP-GTGRKQQLATLGEWMNSSA 152
D + G P R P+ PA +++ +PP R A M ++
Sbjct: 62 NLSGDDHEPREGAVEAPTRRPRGRPAGS-----KNKPKPPIFVTRDSPNALKSHVMEIAS 116
Query: 153 GIAFAPHVISIGVGERPRVVCILSGRGTVSSVTLRQPATS 192
G ++ R R +CILSG GTV++VTLRQP+T+
Sbjct: 117 GTDVI-ETLATFARRRQRGICILSGNGTVANVTLRQPSTA 155
>TAIR|locus:2011701 [details] [associations]
symbol:SOB3 "SUPPRESSOR OF PHYB-4#3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0009640 "photomorphogenesis" evidence=RCA;IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0009933
"meristem structural organization" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 GO:GO:0009640 EMBL:AC015450
HOGENOM:HOG000239043 ProtClustDB:CLSN2679445 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BR000365
IPI:IPI00530632 PIR:H96792 RefSeq:NP_177776.1 UniGene:At.7934
ProteinModelPortal:Q9C9K7 SMR:Q9C9K7 STRING:Q9C9K7 PRIDE:Q9C9K7
EnsemblPlants:AT1G76500.1 GeneID:843983 KEGG:ath:AT1G76500
TAIR:At1g76500 eggNOG:NOG321476 InParanoid:Q9C9K7 OMA:HGANGGT
PhylomeDB:Q9C9K7 Genevestigator:Q9C9K7 Uniprot:Q9C9K7
Length = 302
Score = 109 (43.4 bits), Expect = 0.00082, P = 0.00082
Identities = 40/132 (30%), Positives = 58/132 (43%)
Query: 73 HNMSVPSGVPLSDPVKKKRGRPRKYAPDGQVSLGLSPLPARPKRSPASDSQALKRSRGRP 132
H+ P P P+ + + +P+ P Q S S P P + KR RGRP
Sbjct: 24 HHQLQPQ--PQLHPLPQPQPQPQ---PQQQNSDDESDSNKDPGSDPVTSGSTGKRPRGRP 78
Query: 133 PGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVG------------ERPRVVCILSGRGT 180
PG+ K + + + + HV+ + G R R V ILSG GT
Sbjct: 79 PGSKNKPKPPVI---VTRDSPNVLRSHVLEVSSGADIVESVTTYARRRGRGVSILSGNGT 135
Query: 181 VSSVTLRQPATS 192
V++V+LRQPAT+
Sbjct: 136 VANVSLRQPATT 147
>TAIR|locus:2037350 [details] [associations]
symbol:ESC "ESCAROLA" species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0003690 "double-stranded
DNA binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006325 "chromatin organization" evidence=IMP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0003680 "AT DNA binding" evidence=IDA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0010150 GO:GO:0009640
GO:GO:0003690 GO:GO:0006325 EMBL:AC007369 GO:GO:0003680
EMBL:AF194974 EMBL:BT006460 IPI:IPI00529897 PIR:F86341
RefSeq:NP_173514.1 UniGene:At.11202 UniGene:At.75184
ProteinModelPortal:Q9S7C9 SMR:Q9S7C9 STRING:Q9S7C9 PaxDb:Q9S7C9
PRIDE:Q9S7C9 EnsemblPlants:AT1G20900.1 GeneID:838683
KEGG:ath:AT1G20900 TAIR:At1g20900 eggNOG:NOG303772
HOGENOM:HOG000239043 InParanoid:Q9S7C9 OMA:DSRESDH PhylomeDB:Q9S7C9
ProtClustDB:CLSN2679445 Genevestigator:Q9S7C9 GermOnline:AT1G20900
InterPro:IPR005175 InterPro:IPR014476 Pfam:PF03479
PIRSF:PIRSF016021 Uniprot:Q9S7C9
Length = 311
Score = 109 (43.4 bits), Expect = 0.00087, P = 0.00087
Identities = 34/92 (36%), Positives = 44/92 (47%)
Query: 113 RPKRSPASDSQAL-KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVG----- 166
RP P + S A KR RGRPPG+ K + + + + A HV+ + G
Sbjct: 72 RPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPII---VTRDSPNALRSHVLEVSPGADIVE 128
Query: 167 -------ERPRVVCILSGRGTVSSVTLRQPAT 191
R R V +L G GTVS+VTLRQP T
Sbjct: 129 SVSTYARRRGRGVSVLGGNGTVSNVTLRQPVT 160
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 234 234 0.00087 113 3 11 22 0.43 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 600 (64 KB)
Total size of DFA: 182 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.66u 0.12s 25.78t Elapsed: 00:00:01
Total cpu time: 25.66u 0.12s 25.78t Elapsed: 00:00:01
Start: Sat May 11 02:55:22 2013 End: Sat May 11 02:55:23 2013