Query 026716
Match_columns 234
No_of_seqs 175 out of 286
Neff 3.6
Searched_HMMs 29240
Date Mon Mar 25 20:23:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026716.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026716hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hx0_A Putative DNA-binding pr 98.9 3.4E-09 1.2E-13 86.8 7.1 61 151-212 13-88 (154)
2 2p6y_A Hypothetical protein VC 98.8 3E-09 1E-13 86.0 5.8 56 156-212 2-72 (142)
3 2h6l_A Hypothetical protein; N 98.4 1.3E-07 4.5E-12 76.3 3.9 55 157-212 10-82 (146)
4 2dt4_A Hypothetical protein PH 98.4 1.4E-07 4.7E-12 75.9 3.7 55 157-212 10-82 (143)
5 3htn_A Putative DNA binding pr 98.0 4E-06 1.4E-10 68.2 4.0 56 157-212 16-88 (149)
6 2ezd_A High mobility group pro 96.8 0.00049 1.7E-08 42.4 1.5 16 124-139 3-18 (26)
7 3hwu_A Putative DNA-binding pr 95.8 0.011 3.9E-07 47.6 5.0 55 158-212 14-84 (147)
8 4i95_A Putative uncharacterize 84.0 1.1 3.9E-05 37.0 4.4 33 170-204 36-70 (142)
9 4dyq_A Gene 1 protein; GP1, oc 73.8 0.97 3.3E-05 35.5 0.9 14 87-100 3-16 (140)
10 4gzv_A Hypothetical protein; A 72.0 4.3 0.00015 33.6 4.4 34 169-204 35-70 (142)
11 3kbe_A Superoxide dismutase [C 61.3 17 0.00059 29.6 6.0 35 170-205 3-37 (157)
12 4a7u_A Superoxide dismutase [C 41.6 41 0.0014 27.2 5.2 33 170-203 3-36 (153)
13 3t9g_A Pectate lyase; PL3, par 39.6 43 0.0015 28.9 5.3 32 168-199 43-78 (196)
14 1ee6_A Pectate lyase; parallel 32.8 52 0.0018 28.4 4.7 32 168-199 39-74 (197)
15 3f7l_A Copper,zinc superoxide 30.2 60 0.0021 26.2 4.5 31 170-203 3-34 (152)
16 1xso_A Copper,zinc superoxide 28.8 83 0.0028 25.2 5.0 32 170-203 2-34 (150)
17 3l9y_A Cu-znsod1, superoxide d 27.7 74 0.0025 25.6 4.6 32 170-203 4-35 (154)
18 2q2l_A Superoxide dismutase; S 27.4 75 0.0026 25.6 4.5 32 170-203 3-35 (152)
19 3pu7_A Superoxide dismutase [C 23.8 1.1E+02 0.0037 24.7 4.9 22 169-190 3-25 (154)
20 2wyt_A Superoxide dismutase [C 23.3 1.3E+02 0.0044 24.2 5.2 33 170-203 3-36 (153)
No 1
>2hx0_A Putative DNA-binding protein; NESG, PSI-2, SCR59, structural genomics, protein structure initiative; 1.55A {Salmonella choleraesuis} SCOP: d.290.1.3 PDB: 2nmu_A
Probab=98.87 E-value=3.4e-09 Score=86.84 Aligned_cols=61 Identities=18% Similarity=0.175 Sum_probs=54.5
Q ss_pred CCCCCceeEEEEEcCCC-------------CceeEEEecCCCceeEEEEcCCCCCCCceEEE--EEeEeeecccccc
Q 026716 151 SAGIAFAPHVISIGVGE-------------RPRVVCILSGRGTVSSVTLRQPATSVPTVTYE--VEALCLYLFLFWK 212 (234)
Q Consensus 151 s~g~~ftPHVItV~~GE-------------g~raICILSA~G~VSnVTLRQP~ssggtvTyE--FEILSLSGSflp~ 212 (234)
+....+++|+|++.+|| +-++.|||++.|++++|+||+++... +++|+ ||||||+|++.+.
T Consensus 13 ~~~~~~r~~vlrL~~Gedl~~~i~~~~~~~gi~~a~v~s~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~ 88 (154)
T 2hx0_A 13 HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEA-TTSLTGTFEVISLNGTLELT 88 (154)
T ss_dssp CSCCCCEEEEEEECTTCBHHHHHHHHHHHHTCSSEEEEEEEEEEEEEEEECTTCSS-CEEEEEEEEEEEEEEEEETT
T ss_pred CCCCCccEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEeeeEEeEEEccCCCc-cEecCCcEEEEEeeeeEeCC
Confidence 55678999999999999 67789999999999999999998765 67888 9999999999873
No 2
>2p6y_A Hypothetical protein VCA0587; NESG, Q9KM02_vibch, VCR80, structural genomics, PSI-2, prote structure initiative; 1.63A {Vibrio cholerae}
Probab=98.84 E-value=3e-09 Score=85.98 Aligned_cols=56 Identities=21% Similarity=0.211 Sum_probs=50.8
Q ss_pred ceeEEEEEcCCC-------------CceeEEEecCCCceeEEEEcCCCCCCCceEEE--EEeEeeecccccc
Q 026716 156 FAPHVISIGVGE-------------RPRVVCILSGRGTVSSVTLRQPATSVPTVTYE--VEALCLYLFLFWK 212 (234)
Q Consensus 156 ftPHVItV~~GE-------------g~raICILSA~G~VSnVTLRQP~ssggtvTyE--FEILSLSGSflp~ 212 (234)
|++|+|++.+|| +-++.||+++.|++++|+||+++... +++|+ ||||||+|++.+.
T Consensus 2 ~r~~~lrL~~Gedl~~~i~~~~~~~~i~~a~v~~~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~ 72 (142)
T 2p6y_A 2 IHLIALRLTRGMDLKQQIVQLVQQHRIHAGSIASCVGCLSTLHIRLADSVS-TLQVSAPFEILSLSGTLTYQ 72 (142)
T ss_dssp CEEEEEEECTTCBHHHHHHHHHHHTTCSSEEEEEEEEEEEEEEEECTTSSC-EEEECSCEEEEEEEEEECSS
T ss_pred CcEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEEEEEeEEEECCCCCc-cEecCCcEEEEEeEEEEeCC
Confidence 789999999999 66789999999999999999998754 67788 9999999999884
No 3
>2h6l_A Hypothetical protein; NESG GR103, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Archaeoglobus fulgidus} SCOP: d.290.1.3
Probab=98.42 E-value=1.3e-07 Score=76.27 Aligned_cols=55 Identities=18% Similarity=0.117 Sum_probs=46.8
Q ss_pred eeEEEEEcCCC-------------CceeEEEecCCCceeEEEEcCCCCCC---CceEEE--EEeEeeecccccc
Q 026716 157 APHVISIGVGE-------------RPRVVCILSGRGTVSSVTLRQPATSV---PTVTYE--VEALCLYLFLFWK 212 (234)
Q Consensus 157 tPHVItV~~GE-------------g~raICILSA~G~VSnVTLRQP~ssg---gtvTyE--FEILSLSGSflp~ 212 (234)
++|+|++.+|| +-++-|| ++.|++++|+||+++... .+++++ ||||||+|++.+.
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~v-s~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EIlsl~Gti~~~ 82 (146)
T 2h6l_A 10 KGFLLRLDYGKDLVRQIEEFLEEKGIHAAHI-SAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILSLSGNVSMK 82 (146)
T ss_dssp EEEEEECCTTSBHHHHHHHHHHHHTCCSEEE-EEEEEEEEEEEEEEETTTTEEEEEEECSCEEEEEEEEEEEEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHcCCCEEEE-EEEEEEEEEEEECCCCCCcceeEEEecCcEEEEEeEEEEECC
Confidence 58999999999 4556666 999999999999987665 257777 9999999999985
No 4
>2dt4_A Hypothetical protein PH0802; PPC domain, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii}
Probab=98.41 E-value=1.4e-07 Score=75.90 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=45.2
Q ss_pred eeEEEEEcCCC-------------CceeEEEecCCCceeEEEEcCCCCCCC---ceEEE--EEeEeeecccccc
Q 026716 157 APHVISIGVGE-------------RPRVVCILSGRGTVSSVTLRQPATSVP---TVTYE--VEALCLYLFLFWK 212 (234)
Q Consensus 157 tPHVItV~~GE-------------g~raICILSA~G~VSnVTLRQP~ssgg---tvTyE--FEILSLSGSflp~ 212 (234)
++|+|++.+|| +-++-| +++.|++++|+||+++.... .+++| ||||||+|++.+.
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~-vs~iGsl~~~~l~~~~~~~~~~~~~~~~g~~EIlsl~Gti~~~ 82 (143)
T 2dt4_A 10 RTYLFRVPEGEELLTYIKNFCKKEGIETAI-INGIGTLKNPKIGYFLEEKKEYKVIPLKGSYELISLIGNVSLK 82 (143)
T ss_dssp EEEEEEECTTCBHHHHHHHHHHHHTCCSEE-EEEEEEEEEEEEEEEETTTTEEEEEECCSEEEEEEEEEEEEEE
T ss_pred CEEEEEECCCCcHHHHHHHHHHHcCCCEEE-EEEEEEEEEEEEEeecCccCcceeEeecCCEEEEEeEEEEECC
Confidence 69999999999 444444 49999999999999865542 46666 9999999999985
No 5
>3htn_A Putative DNA binding protein; DUF269 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE 1PE; 1.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.290.1.0
Probab=97.99 E-value=4e-06 Score=68.21 Aligned_cols=56 Identities=18% Similarity=0.139 Sum_probs=45.1
Q ss_pred eeEEEEEcCCC------------CceeEEEecCCCceeEEEEcCCCCCC---CceEEE--EEeEeeecccccc
Q 026716 157 APHVISIGVGE------------RPRVVCILSGRGTVSSVTLRQPATSV---PTVTYE--VEALCLYLFLFWK 212 (234)
Q Consensus 157 tPHVItV~~GE------------g~raICILSA~G~VSnVTLRQP~ssg---gtvTyE--FEILSLSGSflp~ 212 (234)
+.+++.+.+|| .....|++++.|++++|+||+++... ..++++ |||+||+|++.+.
T Consensus 16 r~~~lrl~~Gedl~~~l~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EI~sl~Gti~~~ 88 (149)
T 3htn_A 16 NKYIVSINNHTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSM 88 (149)
T ss_dssp TEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEECTTTCCEEEEEECSCEEEEEEEEEEEEE
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCcEEEEEEEEEeeeEEEEccCCCcccceeEEecCceEEEEeEEEEEcc
Confidence 68999999999 23444555999999999999975432 256777 9999999999985
No 6
>2ezd_A High mobility group protein HMG-I/HMG-Y; DNA binding protein, minor groove DNA binding, transcriptional CO-activator, architectural factor; HET: DNA; NMR {Homo sapiens} SCOP: j.10.1.1 PDB: 2eze_A*
Probab=96.75 E-value=0.00049 Score=42.37 Aligned_cols=16 Identities=50% Similarity=0.814 Sum_probs=14.4
Q ss_pred hcccCCCCCCCCCCcc
Q 026716 124 ALKRSRGRPPGTGRKQ 139 (234)
Q Consensus 124 ~~KR~RGRP~GSknK~ 139 (234)
..||+||||.|||||.
T Consensus 3 tpKrpRgRpkGSKNk~ 18 (26)
T 2ezd_A 3 TPKRPRGRPKGSKNKG 18 (26)
T ss_dssp SCCCCSSCCTTCCCCS
T ss_pred CCcCCCCCcCcccccC
Confidence 4799999999999994
No 7
>3hwu_A Putative DNA-binding protein; YP_299413.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.30A {Ralstonia eutropha}
Probab=95.77 E-value=0.011 Score=47.59 Aligned_cols=55 Identities=20% Similarity=0.197 Sum_probs=40.5
Q ss_pred eEEEEEcCCC------------CceeEEEecCCCceeEEEEcCCCCCCC---ceEEE-EEeEeeecccccc
Q 026716 158 PHVISIGVGE------------RPRVVCILSGRGTVSSVTLRQPATSVP---TVTYE-VEALCLYLFLFWK 212 (234)
Q Consensus 158 PHVItV~~GE------------g~raICILSA~G~VSnVTLRQP~ssgg---tvTyE-FEILSLSGSflp~ 212 (234)
-.++.+.+|| ....-+++++-|++++++|+-.+.... ..+++ |||+||+|+..+.
T Consensus 14 ~~~~rL~~Gedl~~~l~~~~~~~~i~~a~v~~iGsl~~~~l~~~~~~~~~y~~~~~~~~Ei~sl~Gtis~~ 84 (147)
T 3hwu_A 14 GYLMVLRHGDNVLQNLEQLARDEHIPSASFVGIGFMSEATFGFYDFGRKQFDPKTYRNVEMANMTGSIAWK 84 (147)
T ss_dssp EEEEEEETTCBHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEECCCChHHHHHHHHHHHcCCCEEEEEEEecccEEEEEeecCCcCccccEEecCcEEEEEEEEEEcC
Confidence 3789999999 223334559999999999985432221 34566 9999999999874
No 8
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=83.96 E-value=1.1 Score=37.05 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=27.9
Q ss_pred eeEEEecCCCceeEEEEcCCCCCCCceEEE--EEeEe
Q 026716 170 RVVCILSGRGTVSSVTLRQPATSVPTVTYE--VEALC 204 (234)
Q Consensus 170 raICILSA~G~VSnVTLRQP~ssggtvTyE--FEILS 204 (234)
..+=|||..|++.|+++++ .++.++|.+ |||.|
T Consensus 36 n~lKIlSdDgtF~Ni~m~~--~~~aiIt~~GtY~~~S 70 (142)
T 4i95_A 36 NTFKVLSDDGRIVNFTIRP--GTDAIITGYGTYRQIS 70 (142)
T ss_dssp EEEEEECTTSEEEEEECCT--TSCCEEEEEEEEEEEE
T ss_pred ccEEEEcCCCcEEEEEEec--CCCcEEEEeEEEEecC
Confidence 5789999999999999994 467777765 99887
No 9
>4dyq_A Gene 1 protein; GP1, octamer, DNA-binding, viral protein; 1.50A {Shigella phage SF6} PDB: 4dyc_A 4dyr_A 3hef_A 4dzj_A 4dzp_A
Probab=73.80 E-value=0.97 Score=35.54 Aligned_cols=14 Identities=43% Similarity=0.947 Sum_probs=6.2
Q ss_pred ccccCCCCCCCCCC
Q 026716 87 VKKKRGRPRKYAPD 100 (234)
Q Consensus 87 ~KkKRGRPRKYgpd 100 (234)
.|+|+|||.||-+.
T Consensus 3 ~~~k~GRPtk~t~e 16 (140)
T 4dyq_A 3 TEPKAGRPSDYMPE 16 (140)
T ss_dssp -------CCSCCTT
T ss_pred CCCCCCCCCCCCHH
Confidence 48999999999875
No 10
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=72.02 E-value=4.3 Score=33.58 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=27.1
Q ss_pred ceeEEEecCCCceeEEEEcCCCCCCCceEEE--EEeEe
Q 026716 169 PRVVCILSGRGTVSSVTLRQPATSVPTVTYE--VEALC 204 (234)
Q Consensus 169 ~raICILSA~G~VSnVTLRQP~ssggtvTyE--FEILS 204 (234)
.-..=|||.+|++.|++++... +.++|-+ ||+.|
T Consensus 35 s~~~KIlS~DgtF~N~~m~~~~--~aiIt~yGtY~l~S 70 (142)
T 4gzv_A 35 SNTFKVLSDDGRIVNFTIIPGA--DAIITGYGTYKQLT 70 (142)
T ss_dssp EEEEEEECTTSEEEEEECCTTS--CCEEEEEEEEEEEE
T ss_pred cCceEEECCCCcEEEEEEeCCC--CcEEEEeEEEEecC
Confidence 3578899999999999997643 6677755 99887
No 11
>3kbe_A Superoxide dismutase [CU-ZN]; Cu-Zn superoxide dismutase, antioxidant, oxidoreductase, NEM disulfide bond, metal-binding; 1.10A {Caenorhabditis elegans} SCOP: b.1.8.1 PDB: 3kbf_A
Probab=61.25 E-value=17 Score=29.62 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=24.8
Q ss_pred eeEEEecCCCceeEEEEcCCCCCCCceEEEEEeEee
Q 026716 170 RVVCILSGRGTVSSVTLRQPATSVPTVTYEVEALCL 205 (234)
Q Consensus 170 raICILSA~G~VSnVTLRQP~ssggtvTyEFEILSL 205 (234)
+|||||..+++.-.|++.|... +..+.++.+|--|
T Consensus 3 ~Avavl~g~~V~G~v~f~q~~~-g~~v~v~~~l~GL 37 (157)
T 3kbe_A 3 RAVAVLRGETVTGTIWITQKSE-NDQAVIEGEIKGL 37 (157)
T ss_dssp EEEEEEBCSSCEEEEEEECSST-TSCCEEEEEEESC
T ss_pred EEEEEEeCCCEEEEEEEEEeCC-CCeEEEEEEEECC
Confidence 7999999999899999999643 3334444444333
No 12
>4a7u_A Superoxide dismutase [CU-ZN]; oxidoreductase, amyotrophic lateral sclerosis, antioxidant, mutation, metal-binding, Zn superoxide dismutase; HET: ALE; 0.98A {Homo sapiens} PDB: 3ecv_A 1uxl_A* 4a7g_F* 4a7q_A* 4a7t_A* 4a7s_A* 4a7v_A* 4b3e_A 4a7g_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A ...
Probab=41.59 E-value=41 Score=27.17 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=22.4
Q ss_pred eeEEEecCCC-ceeEEEEcCCCCCCCceEEEEEeE
Q 026716 170 RVVCILSGRG-TVSSVTLRQPATSVPTVTYEVEAL 203 (234)
Q Consensus 170 raICILSA~G-~VSnVTLRQP~ssggtvTyEFEIL 203 (234)
+|||||..++ +.-.|++.|.... +.+.++.+|-
T Consensus 3 ~Avavl~g~~~v~G~v~f~q~~~~-~~v~v~~~i~ 36 (153)
T 4a7u_A 3 KAVCVLKGDGPVQGIINFEQKESN-GPVKVWGSIK 36 (153)
T ss_dssp EEEEEEBCSSSCEEEEEEEESSTT-CCEEEEEEEE
T ss_pred EEEEEEcCCCccEEEEEEEEeCCC-CcEEEEEEEE
Confidence 7999999887 5678999996432 3344444443
No 13
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=39.62 E-value=43 Score=28.90 Aligned_cols=32 Identities=13% Similarity=0.158 Sum_probs=25.6
Q ss_pred CceeEEEecCCCceeEEEEcCCCCCC----CceEEE
Q 026716 168 RPRVVCILSGRGTVSSVTLRQPATSV----PTVTYE 199 (234)
Q Consensus 168 g~raICILSA~G~VSnVTLRQP~ssg----gtvTyE 199 (234)
++.+|-||-.-++++||.|-.++..| +.-|+|
T Consensus 43 ~q~~vF~le~GaTLkNvIIG~~~~dGIHC~G~ctl~ 78 (196)
T 3t9g_A 43 NQKPIFKLEKGANLKNVIIGAPGCDGIHCYGDNVVE 78 (196)
T ss_dssp CCCCSEEECTTCEEEEEEECSCCTTCEEECSSEEEE
T ss_pred CCCceEEEcCCCEEEEEEECCCCcCcEEEcCCEeEE
Confidence 67899999999999999997776544 556666
No 14
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=32.80 E-value=52 Score=28.42 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=25.0
Q ss_pred CceeEEEecCCCceeEEEEcCCCCCC----CceEEE
Q 026716 168 RPRVVCILSGRGTVSSVTLRQPATSV----PTVTYE 199 (234)
Q Consensus 168 g~raICILSA~G~VSnVTLRQP~ssg----gtvTyE 199 (234)
++.+|-||-.-++++||.|-.++..| +.-|+|
T Consensus 39 ~q~~vF~le~GaTLkNvIIG~~~~dGIHC~G~Ctle 74 (197)
T 1ee6_A 39 NQKPIFRLEAGASLKNVVIGAPAADGVHCYGDCTIT 74 (197)
T ss_dssp SCCCSEEECTTEEEEEEEECSSCTTCEEEESCEEEE
T ss_pred CCCcEEEecCCCEEEEEEEcCCCcccEEEcCceeEE
Confidence 56789999999999999997776544 456666
No 15
>3f7l_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor), greek KEY beta-barrel, amyloid filaments, ALS, FALS; 0.99A {Alvinella pompejana} SCOP: b.1.8.1 PDB: 3f7k_A
Probab=30.22 E-value=60 Score=26.17 Aligned_cols=31 Identities=26% Similarity=0.436 Sum_probs=21.3
Q ss_pred eeEEEecCCC-ceeEEEEcCCCCCCCceEEEEEeE
Q 026716 170 RVVCILSGRG-TVSSVTLRQPATSVPTVTYEVEAL 203 (234)
Q Consensus 170 raICILSA~G-~VSnVTLRQP~ssggtvTyEFEIL 203 (234)
+|||||..++ ++-.|++.|. ...+.++.+|-
T Consensus 3 ~Avavl~g~~~v~G~v~f~q~---~~~v~v~~~l~ 34 (152)
T 3f7l_A 3 HAVCVLKGDSPVTGTIHLKEE---GDMVTVTGEIT 34 (152)
T ss_dssp EEEEEEBCSSSCEEEEEEEEE---TTEEEEEEEEE
T ss_pred EEEEEEcCCCCcEEEEEEEEc---CCcEEEEEEEE
Confidence 6999999875 6678999986 23344444443
No 16
>1xso_A Copper,zinc superoxide dismutase; oxidoreductase (superoxide acceptor); 1.49A {Xenopus laevis} SCOP: b.1.8.1
Probab=28.84 E-value=83 Score=25.24 Aligned_cols=32 Identities=28% Similarity=0.472 Sum_probs=21.7
Q ss_pred eeEEEecCCC-ceeEEEEcCCCCCCCceEEEEEeE
Q 026716 170 RVVCILSGRG-TVSSVTLRQPATSVPTVTYEVEAL 203 (234)
Q Consensus 170 raICILSA~G-~VSnVTLRQP~ssggtvTyEFEIL 203 (234)
+|+|||..++ ++-.|++.|-. . +.++++.+|-
T Consensus 2 ~Ava~l~~~~~v~G~v~f~q~~-~-~~v~v~~~i~ 34 (150)
T 1xso_A 2 KAVCVLAGSGDVKGVVHFEQQD-E-GAVSVEGKIE 34 (150)
T ss_dssp EEEEEEBCSSSCEEEEEEEEST-T-SCEEEEEEEE
T ss_pred EEEEEEcCCCccEEEEEEEEcC-C-CcEEEEEEEC
Confidence 5899999886 55799999962 2 3344444443
No 17
>3l9y_A Cu-znsod1, superoxide dismutase [CU-ZN]; greek-KEY-barrel, antioxidant, copper, cytoplasm, metal- binding, oxidoreductase; 1.80A {Bombyx mori} SCOP: b.1.8.1 PDB: 3l9e_A
Probab=27.70 E-value=74 Score=25.65 Aligned_cols=32 Identities=25% Similarity=0.404 Sum_probs=22.0
Q ss_pred eeEEEecCCCceeEEEEcCCCCCCCceEEEEEeE
Q 026716 170 RVVCILSGRGTVSSVTLRQPATSVPTVTYEVEAL 203 (234)
Q Consensus 170 raICILSA~G~VSnVTLRQP~ssggtvTyEFEIL 203 (234)
+|||||..+ +.-.|++.|.... ..+.++.+|-
T Consensus 4 ~Ava~l~G~-v~G~v~f~q~~~~-~~v~v~~~l~ 35 (154)
T 3l9y_A 4 KAVCVLRGD-VSGTVFFDQQDEK-SPVVVSGEVQ 35 (154)
T ss_dssp EEEEEEEES-SEEEEEEEESSTT-SCEEEEEEEE
T ss_pred EEEEEEcCC-CEEEEEEEEeCCC-CcEEEEEEEE
Confidence 799999987 7789999996432 3344444443
No 18
>2q2l_A Superoxide dismutase; SOD, SAD, antioxidant, oxidoreductase, metal-binding; 2.37A {Potentilla atrosanguinea}
Probab=27.36 E-value=75 Score=25.61 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=21.6
Q ss_pred eeEEEecCCC-ceeEEEEcCCCCCCCceEEEEEeE
Q 026716 170 RVVCILSGRG-TVSSVTLRQPATSVPTVTYEVEAL 203 (234)
Q Consensus 170 raICILSA~G-~VSnVTLRQP~ssggtvTyEFEIL 203 (234)
.|+|||..++ ++-.|++.|. ..+.+.++.+|-
T Consensus 3 ~Ava~l~g~~~v~G~v~f~q~--~~g~v~v~~~i~ 35 (152)
T 2q2l_A 3 KGVAVLSSSEGVAGTILFTQE--GDGPTTVTGNIS 35 (152)
T ss_dssp EEEEECBCSSSCEEEEEEEES--TTSCEEEEEEEE
T ss_pred eEEEEEeCCCccEEEEEEEEc--CCCcEEEEEEEC
Confidence 6899999876 5589999994 233344444443
No 19
>3pu7_A Superoxide dismutase [CU-ZN], chloroplastic; oxidoreductase, antioxidant, metal-binding, DIS bond, transit peptide; 1.80A {Solanum lycopersicum} PDB: 3km1_A 3km2_A 3mkg_A 3hog_A 3s0p_A 1srd_A
Probab=23.80 E-value=1.1e+02 Score=24.74 Aligned_cols=22 Identities=32% Similarity=0.448 Sum_probs=17.6
Q ss_pred ceeEEEecCCC-ceeEEEEcCCC
Q 026716 169 PRVVCILSGRG-TVSSVTLRQPA 190 (234)
Q Consensus 169 ~raICILSA~G-~VSnVTLRQP~ 190 (234)
.+|||||..++ +.-.|++.|..
T Consensus 3 ~~Avavl~g~~~V~G~v~f~q~~ 25 (154)
T 3pu7_A 3 KKAVAVLKGNSNVEGVVTLSQDD 25 (154)
T ss_dssp EEEEEEEBCSSSCEEEEEEEEET
T ss_pred ceEEEEECCCCCCEEEEEEEEeC
Confidence 37999999875 56889999964
No 20
>2wyt_A Superoxide dismutase [CU-ZN]; oxidoreductase, disease mutation, amyotrophic lateral sclero antioxidant; HET: SO4; 1.00A {Homo sapiens} PDB: 2wyz_A* 2wz0_A* 2wz5_A* 1hl4_A 1spd_A 2c9v_A* 1hl5_A 1pu0_A 2c9u_A 2c9s_A* 2v0a_A* 3ecu_A 3kh3_A 3kh4_A 3re0_A 2wko_A 3gzo_A 2wz6_A* 3gzp_A 1uxl_A ...
Probab=23.32 E-value=1.3e+02 Score=24.21 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=22.6
Q ss_pred eeEEEecCCC-ceeEEEEcCCCCCCCceEEEEEeE
Q 026716 170 RVVCILSGRG-TVSSVTLRQPATSVPTVTYEVEAL 203 (234)
Q Consensus 170 raICILSA~G-~VSnVTLRQP~ssggtvTyEFEIL 203 (234)
.|+|+|..+| ++-.|++.|-.. +..++++.+|-
T Consensus 3 ~Ava~l~~~~~v~G~v~f~q~~~-g~~v~v~~~i~ 36 (153)
T 2wyt_A 3 KAVCVLKGDGPVQGIINFEQKES-NGPVKVWGSIK 36 (153)
T ss_dssp EEEEEEBCSSSCEEEEEEEECST-TCCEEEEEEEE
T ss_pred EEEEEEcCCCceEEEEEEEEcCC-CCcEEEEEEEC
Confidence 5899999877 457999999643 34455555543
Done!