Query 026717
Match_columns 234
No_of_seqs 120 out of 520
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 20:24:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 3.4E-87 1.2E-91 582.1 22.5 212 4-218 6-236 (236)
2 3uzd_A 14-3-3 protein gamma; s 100.0 4.4E-87 1.5E-91 584.7 22.9 218 3-223 1-239 (248)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 2.2E-86 7.6E-91 582.7 23.3 214 3-219 28-260 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 8.4E-85 2.9E-89 567.6 22.9 213 3-218 2-233 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 3.3E-84 1.1E-88 570.6 23.7 215 4-221 6-241 (260)
6 2npm_A 14-3-3 domain containin 100.0 1.2E-83 4E-88 566.8 22.9 212 5-220 27-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 3.8E-83 1.3E-87 563.6 17.5 218 5-229 28-267 (268)
8 2o8p_A 14-3-3 domain containin 100.0 5.6E-79 1.9E-83 526.7 21.7 199 5-215 2-226 (227)
9 3n71_A Histone lysine methyltr 95.1 0.22 7.6E-06 46.7 12.3 97 96-206 326-422 (490)
10 3edt_B KLC 2, kinesin light ch 95.1 0.98 3.4E-05 35.9 18.2 74 123-207 126-199 (283)
11 3u3w_A Transcriptional activat 95.0 1.3 4.5E-05 36.9 19.4 73 124-208 155-227 (293)
12 3qwp_A SET and MYND domain-con 94.7 0.21 7.3E-06 45.8 10.8 57 150-207 345-401 (429)
13 3qww_A SET and MYND domain-con 94.6 0.37 1.3E-05 44.4 12.3 97 96-206 315-411 (433)
14 3vtx_A MAMA; tetratricopeptide 94.6 1.1 3.8E-05 34.0 18.9 164 7-206 6-170 (184)
15 3nf1_A KLC 1, kinesin light ch 94.4 1.6 5.6E-05 35.3 20.3 186 7-207 28-225 (311)
16 4a1s_A PINS, partner of inscut 94.2 2.4 8.2E-05 36.3 20.9 188 7-207 49-253 (411)
17 3ulq_A Response regulator aspa 94.1 0.79 2.7E-05 39.6 12.6 75 122-209 101-175 (383)
18 3sf4_A G-protein-signaling mod 93.8 2.6 9E-05 35.5 20.6 189 7-208 10-218 (406)
19 3edt_B KLC 2, kinesin light ch 93.7 0.74 2.5E-05 36.6 10.8 56 150-206 101-156 (283)
20 3q15_A PSP28, response regulat 93.4 0.77 2.6E-05 39.7 11.3 76 120-208 97-172 (378)
21 3qww_A SET and MYND domain-con 92.9 0.24 8.2E-06 45.7 7.5 55 151-206 315-369 (433)
22 2qfc_A PLCR protein; TPR, HTH, 92.7 3.7 0.00013 34.0 18.1 76 120-207 151-226 (293)
23 3ro2_A PINS homolog, G-protein 92.7 3.3 0.00011 33.4 21.1 189 7-208 6-214 (338)
24 3n71_A Histone lysine methyltr 92.3 0.31 1.1E-05 45.7 7.5 55 151-206 326-380 (490)
25 3ulq_A Response regulator aspa 92.0 5.3 0.00018 34.2 16.5 77 121-209 140-216 (383)
26 3u4t_A TPR repeat-containing p 91.0 5 0.00017 31.9 17.2 54 152-206 197-250 (272)
27 3qwp_A SET and MYND domain-con 90.3 0.36 1.2E-05 44.3 5.6 55 151-206 304-358 (429)
28 3ro2_A PINS homolog, G-protein 90.2 6.1 0.00021 31.7 17.1 56 150-208 199-254 (338)
29 4g1t_A Interferon-induced prot 90.1 8.9 0.0003 33.4 15.6 52 150-206 350-401 (472)
30 3ro3_A PINS homolog, G-protein 90.0 3.8 0.00013 29.0 11.3 73 123-208 48-120 (164)
31 4a1s_A PINS, partner of inscut 90.0 8.2 0.00028 32.8 17.0 70 150-222 319-388 (411)
32 3hym_B Cell division cycle pro 89.9 6.9 0.00024 31.7 17.9 48 150-206 252-299 (330)
33 4abn_A Tetratricopeptide repea 89.4 12 0.00041 33.8 17.8 174 7-206 103-287 (474)
34 4gcn_A Protein STI-1; structur 89.1 1.2 4E-05 32.8 6.8 48 150-206 24-71 (127)
35 2y4t_A DNAJ homolog subfamily 88.2 12 0.0004 32.2 16.8 48 150-206 311-358 (450)
36 3ieg_A DNAJ homolog subfamily 87.9 9.9 0.00034 31.0 19.7 48 150-206 288-335 (359)
37 3u4t_A TPR repeat-containing p 87.3 8.6 0.00029 30.5 11.5 58 7-69 4-61 (272)
38 3q15_A PSP28, response regulat 87.2 13 0.00045 31.7 17.3 55 150-208 238-292 (378)
39 2xpi_A Anaphase-promoting comp 86.5 18 0.0006 32.5 20.1 48 150-206 532-579 (597)
40 4b4t_Q 26S proteasome regulato 86.5 15 0.0005 31.5 18.3 178 9-207 58-246 (434)
41 3fp2_A TPR repeat-containing p 86.4 16 0.00056 32.0 15.4 54 150-206 394-457 (537)
42 1fch_A Peroxisomal targeting s 86.3 13 0.00045 30.8 16.5 59 7-70 99-157 (368)
43 4i17_A Hypothetical protein; T 86.1 10 0.00036 29.5 15.3 61 6-70 7-67 (228)
44 3fp2_A TPR repeat-containing p 85.9 18 0.0006 31.8 17.7 49 150-207 444-492 (537)
45 2ho1_A Type 4 fimbrial biogene 85.8 11 0.00038 29.5 16.1 58 8-70 39-96 (252)
46 3rkv_A Putative peptidylprolyl 84.9 1.6 5.4E-05 32.8 5.5 56 150-206 27-92 (162)
47 4gyw_A UDP-N-acetylglucosamine 84.7 30 0.001 33.6 16.9 164 7-207 10-175 (723)
48 3gw4_A Uncharacterized protein 83.5 12 0.00042 28.0 11.8 75 121-208 63-138 (203)
49 3sf4_A G-protein-signaling mod 83.4 18 0.00063 30.1 20.0 182 8-208 49-258 (406)
50 2gw1_A Mitochondrial precursor 83.1 22 0.00076 30.8 17.9 56 150-206 205-266 (514)
51 4eqf_A PEX5-related protein; a 83.1 19 0.00066 30.0 16.7 58 7-69 66-123 (365)
52 4gco_A Protein STI-1; structur 82.9 3.8 0.00013 29.9 6.8 48 150-206 29-76 (126)
53 4gcn_A Protein STI-1; structur 82.1 4.6 0.00016 29.4 7.0 55 150-206 58-112 (127)
54 3u3w_A Transcriptional activat 82.0 16 0.00053 30.1 11.1 71 124-208 115-186 (293)
55 1elr_A TPR2A-domain of HOP; HO 81.7 5.1 0.00018 27.5 6.8 55 150-206 54-108 (131)
56 2q7f_A YRRB protein; TPR, prot 81.6 16 0.00055 28.1 13.2 47 151-206 176-222 (243)
57 2pl2_A Hypothetical conserved 81.3 18 0.00062 28.4 14.8 59 7-70 6-64 (217)
58 3sz7_A HSC70 cochaperone (SGT) 80.9 13 0.00043 27.6 9.3 47 151-206 62-108 (164)
59 4g1t_A Interferon-induced prot 80.6 3.7 0.00013 35.8 6.9 56 150-206 67-123 (472)
60 2q7f_A YRRB protein; TPR, prot 80.6 17 0.0006 27.9 18.4 164 8-207 25-189 (243)
61 2y4t_A DNAJ homolog subfamily 80.1 27 0.00093 29.8 19.1 168 10-206 147-324 (450)
62 1xnf_A Lipoprotein NLPI; TPR, 80.1 20 0.00067 28.2 14.7 30 176-206 215-244 (275)
63 2l6j_A TPR repeat-containing p 79.5 6.3 0.00022 26.6 6.6 47 151-206 21-67 (111)
64 2gw1_A Mitochondrial precursor 79.4 30 0.001 29.9 16.2 49 150-207 431-479 (514)
65 3vtx_A MAMA; tetratricopeptide 78.6 10 0.00036 28.3 8.2 48 150-206 21-68 (184)
66 2ifu_A Gamma-SNAP; membrane fu 78.4 28 0.00096 28.9 15.9 52 151-206 132-184 (307)
67 1hz4_A MALT regulatory protein 78.1 8 0.00027 32.7 8.1 56 151-207 110-165 (373)
68 2vq2_A PILW, putative fimbrial 77.8 20 0.00068 27.0 17.8 59 7-70 9-67 (225)
69 1na3_A Designed protein CTPR2; 77.3 9.4 0.00032 24.7 6.8 48 150-206 25-72 (91)
70 3gyz_A Chaperone protein IPGC; 77.1 5.4 0.00018 30.6 6.2 49 150-207 86-134 (151)
71 2dba_A Smooth muscle cell asso 77.0 7.5 0.00026 27.5 6.6 35 170-205 59-93 (148)
72 3ieg_A DNAJ homolog subfamily 76.8 28 0.00097 28.2 19.6 168 10-206 124-301 (359)
73 3nf1_A KLC 1, kinesin light ch 76.8 26 0.0009 27.8 20.5 183 9-206 72-307 (311)
74 3ro3_A PINS homolog, G-protein 76.3 17 0.00059 25.4 18.7 58 150-210 105-162 (164)
75 3hym_B Cell division cycle pro 76.0 29 0.00098 27.9 18.2 56 150-206 209-265 (330)
76 2xev_A YBGF; tetratricopeptide 75.8 13 0.00045 25.7 7.6 50 151-206 56-105 (129)
77 2pl2_A Hypothetical conserved 75.8 27 0.00091 27.4 20.0 142 6-206 39-180 (217)
78 3k9i_A BH0479 protein; putativ 75.4 9.6 0.00033 26.7 6.8 48 150-206 43-90 (117)
79 2kck_A TPR repeat; tetratricop 74.6 11 0.00037 24.9 6.6 47 151-206 23-69 (112)
80 3lf9_A 4E10_D0_1IS1A_001_C (T1 74.3 16 0.00054 28.0 7.8 88 20-113 11-103 (121)
81 1qqe_A Vesicular transport pro 74.2 35 0.0012 28.0 16.0 54 150-207 134-188 (292)
82 3ma5_A Tetratricopeptide repea 74.2 10 0.00034 26.1 6.5 49 150-207 23-71 (100)
83 2xpi_A Anaphase-promoting comp 73.5 50 0.0017 29.4 21.4 54 150-206 491-545 (597)
84 2kc7_A BFR218_protein; tetratr 72.6 14 0.00049 24.5 6.9 48 151-206 17-64 (99)
85 3qky_A Outer membrane assembly 72.5 35 0.0012 27.1 18.5 185 5-206 14-224 (261)
86 2kat_A Uncharacterized protein 71.6 15 0.00052 25.3 7.0 49 150-207 35-83 (115)
87 1qqe_A Vesicular transport pro 71.1 42 0.0014 27.6 14.8 27 8-34 39-65 (292)
88 1xi4_A Clathrin heavy chain; a 70.9 26 0.00087 37.7 10.9 25 181-205 1284-1308(1630)
89 2xev_A YBGF; tetratricopeptide 70.6 11 0.00036 26.3 6.0 50 151-206 19-68 (129)
90 1a17_A Serine/threonine protei 70.6 20 0.00069 25.6 7.8 47 151-206 64-110 (166)
91 2ifu_A Gamma-SNAP; membrane fu 69.9 46 0.0016 27.5 15.1 51 150-204 171-222 (307)
92 2hr2_A Hypothetical protein; a 69.8 16 0.00055 29.0 7.4 55 150-206 27-86 (159)
93 3cv0_A Peroxisome targeting si 69.8 41 0.0014 26.9 16.4 60 7-71 22-81 (327)
94 3upv_A Heat shock protein STI1 69.7 16 0.00053 25.6 6.8 46 151-205 21-66 (126)
95 1fch_A Peroxisomal targeting s 69.6 46 0.0016 27.3 20.5 58 7-69 65-122 (368)
96 3k9i_A BH0479 protein; putativ 68.9 10 0.00034 26.6 5.5 49 152-206 8-56 (117)
97 4gco_A Protein STI-1; structur 68.7 16 0.00054 26.4 6.8 48 150-206 63-110 (126)
98 3cv0_A Peroxisome targeting si 68.6 43 0.0015 26.7 18.5 60 7-71 56-115 (327)
99 2lni_A Stress-induced-phosphop 68.4 18 0.00061 24.8 6.8 47 151-206 67-113 (133)
100 2v5f_A Prolyl 4-hydroxylase su 68.1 28 0.00095 24.3 7.9 54 151-206 22-75 (104)
101 1xnf_A Lipoprotein NLPI; TPR, 67.8 41 0.0014 26.2 9.9 48 150-206 93-140 (275)
102 1elr_A TPR2A-domain of HOP; HO 67.2 20 0.00068 24.3 6.8 49 150-207 20-68 (131)
103 3q49_B STIP1 homology and U bo 66.9 19 0.00065 25.1 6.8 17 190-206 90-106 (137)
104 1elw_A TPR1-domain of HOP; HOP 65.7 22 0.00074 23.5 6.6 47 151-206 55-101 (118)
105 3upv_A Heat shock protein STI1 65.6 21 0.00072 24.8 6.8 48 151-207 55-102 (126)
106 2qfc_A PLCR protein; TPR, HTH, 65.3 19 0.00064 29.6 7.3 180 7-207 76-267 (293)
107 1ihg_A Cyclophilin 40; ppiase 64.3 8.8 0.0003 33.8 5.3 56 150-206 239-302 (370)
108 3rkv_A Putative peptidylprolyl 64.1 40 0.0014 24.7 10.3 47 151-206 80-126 (162)
109 3as5_A MAMA; tetratricopeptide 63.9 37 0.0013 24.3 17.6 163 8-206 10-173 (186)
110 2vyi_A SGTA protein; chaperone 63.6 26 0.00088 23.6 6.8 17 190-206 93-109 (131)
111 1elw_A TPR1-domain of HOP; HOP 62.6 29 0.00099 22.9 6.8 48 150-206 20-67 (118)
112 2vyi_A SGTA protein; chaperone 62.6 28 0.00095 23.4 6.8 9 153-161 65-73 (131)
113 2vgx_A Chaperone SYCD; alterna 61.6 22 0.00075 26.4 6.5 47 151-206 72-118 (148)
114 3uq3_A Heat shock protein STI1 61.2 53 0.0018 25.1 19.0 56 7-68 6-61 (258)
115 2fbn_A 70 kDa peptidylprolyl i 61.0 26 0.0009 26.7 7.0 50 151-206 55-117 (198)
116 3uq3_A Heat shock protein STI1 60.8 54 0.0018 25.1 17.2 49 150-207 189-237 (258)
117 1a17_A Serine/threonine protei 60.8 27 0.00094 24.9 6.8 27 8-34 15-41 (166)
118 1lyp_A CAP18; lipopolysacchari 59.7 21 0.00071 20.4 4.4 26 85-110 4-29 (32)
119 4ga2_A E3 SUMO-protein ligase 59.6 28 0.00096 25.7 6.8 47 151-206 48-94 (150)
120 1na0_A Designed protein CTPR3; 59.3 35 0.0012 22.6 6.8 16 190-205 90-105 (125)
121 3q49_B STIP1 homology and U bo 59.3 32 0.0011 23.9 6.8 11 152-162 61-71 (137)
122 2dba_A Smooth muscle cell asso 59.0 31 0.001 24.1 6.6 48 150-206 81-128 (148)
123 1na0_A Designed protein CTPR3; 58.1 38 0.0013 22.4 6.8 9 19-27 22-30 (125)
124 2xcb_A PCRH, regulatory protei 57.6 29 0.001 25.0 6.5 48 150-206 68-115 (142)
125 2e2e_A Formate-dependent nitri 56.3 34 0.0012 25.3 6.8 47 151-206 98-144 (177)
126 3gw4_A Uncharacterized protein 56.1 59 0.002 24.0 20.3 79 122-213 105-183 (203)
127 1p5q_A FKBP52, FK506-binding p 55.4 13 0.00044 31.9 4.7 55 151-206 164-225 (336)
128 4gfq_A Ribosome-recycling fact 55.3 25 0.00086 29.4 6.2 69 40-113 127-199 (209)
129 1hh8_A P67PHOX, NCF-2, neutrop 55.2 34 0.0012 25.8 6.8 48 150-206 53-100 (213)
130 2lni_A Stress-induced-phosphop 54.8 18 0.00063 24.7 4.7 47 151-206 33-79 (133)
131 4gyw_A UDP-N-acetylglucosamine 54.5 1.6E+02 0.0054 28.5 15.0 57 7-68 44-100 (723)
132 2fbn_A 70 kDa peptidylprolyl i 54.4 36 0.0012 25.8 6.8 47 151-206 105-151 (198)
133 1kt0_A FKBP51, 51 kDa FK506-bi 54.0 25 0.00085 31.6 6.5 55 150-206 284-346 (457)
134 2hr2_A Hypothetical protein; a 53.1 31 0.0011 27.2 6.2 55 151-206 74-131 (159)
135 1ya0_A SMG-7 transcript varian 53.0 96 0.0033 28.9 10.5 48 129-188 157-210 (497)
136 3urz_A Uncharacterized protein 52.9 38 0.0013 26.3 6.8 29 6-34 4-32 (208)
137 2c2l_A CHIP, carboxy terminus 52.7 30 0.001 28.6 6.4 47 156-206 53-101 (281)
138 1zu2_A Mitochondrial import re 52.6 50 0.0017 26.0 7.4 74 128-206 40-120 (158)
139 3as5_A MAMA; tetratricopeptide 52.5 45 0.0015 23.8 6.8 47 151-206 93-139 (186)
140 2yhc_A BAMD, UPF0169 lipoprote 51.8 82 0.0028 24.5 19.1 65 7-73 5-69 (225)
141 1wao_1 Serine/threonine protei 51.2 31 0.0011 31.3 6.8 28 178-206 76-103 (477)
142 2ho1_A Type 4 fimbrial biogene 50.1 85 0.0029 24.1 17.5 62 6-72 71-132 (252)
143 1hxi_A PEX5, peroxisome target 49.9 28 0.00095 24.8 5.1 47 150-205 67-113 (121)
144 3gyz_A Chaperone protein IPGC; 49.8 49 0.0017 25.0 6.8 48 150-206 52-99 (151)
145 1dd5_A Ribosome recycling fact 48.7 42 0.0014 27.4 6.5 69 40-113 103-175 (185)
146 4eqf_A PEX5-related protein; a 48.2 1.1E+02 0.0039 25.0 18.6 58 7-69 100-157 (365)
147 1ise_A Ribosome recycling fact 46.9 44 0.0015 27.3 6.3 69 40-113 103-175 (185)
148 2vgx_A Chaperone SYCD; alterna 46.4 61 0.0021 23.8 6.8 47 151-206 38-84 (148)
149 1is1_A Ribosome recycling fact 46.4 46 0.0016 27.1 6.4 69 40-113 103-175 (185)
150 1hh8_A P67PHOX, NCF-2, neutrop 45.2 94 0.0032 23.2 14.1 57 150-207 87-151 (213)
151 4ga2_A E3 SUMO-protein ligase 45.1 32 0.0011 25.4 4.9 48 150-206 13-60 (150)
152 1wqg_A Ribosome recycling fact 45.1 50 0.0017 26.9 6.4 69 40-113 103-175 (185)
153 1w3b_A UDP-N-acetylglucosamine 45.0 1.3E+02 0.0046 24.9 16.3 47 151-206 254-300 (388)
154 3qky_A Outer membrane assembly 44.4 1.1E+02 0.0039 23.9 11.7 63 10-73 152-223 (261)
155 1hxi_A PEX5, peroxisome target 44.4 76 0.0026 22.3 6.8 48 150-206 33-80 (121)
156 1eh1_A Ribosome recycling fact 43.3 44 0.0015 27.3 5.8 73 40-113 104-176 (185)
157 3bee_A Putative YFRE protein; 43.2 35 0.0012 23.8 4.6 28 7-34 44-71 (93)
158 2yhc_A BAMD, UPF0169 lipoprote 43.0 90 0.0031 24.2 7.6 50 151-206 21-70 (225)
159 1ge9_A Ribosome recycling fact 42.5 73 0.0025 25.9 7.0 70 40-113 105-174 (184)
160 2kat_A Uncharacterized protein 37.6 93 0.0032 21.0 12.3 60 6-70 19-78 (115)
161 2wh5_A Acyl-COA-binding domain 37.5 62 0.0021 23.9 5.3 38 20-59 10-47 (106)
162 4abn_A Tetratricopeptide repea 37.2 2.2E+02 0.0075 25.2 18.1 46 7-57 138-183 (474)
163 1p5q_A FKBP52, FK506-binding p 36.4 82 0.0028 26.7 6.8 47 151-206 213-259 (336)
164 3ma5_A Tetratricopeptide repea 34.7 1E+02 0.0035 20.6 9.7 59 6-69 7-65 (100)
165 1wao_1 Serine/threonine protei 34.2 66 0.0023 29.0 6.1 13 190-202 123-135 (477)
166 2if4_A ATFKBP42; FKBP-like, al 33.2 39 0.0013 28.9 4.2 50 151-206 196-259 (338)
167 2wb7_A PT26-6P; extra chromoso 31.2 2.1E+02 0.0073 27.0 8.9 54 137-191 435-488 (526)
168 2e2e_A Formate-dependent nitri 30.8 98 0.0034 22.6 5.7 49 150-206 60-110 (177)
169 2w9y_A CE-FAR-7, fatty acid/re 30.4 80 0.0027 24.7 5.1 75 96-173 60-136 (140)
170 3sz7_A HSC70 cochaperone (SGT) 28.5 1.7E+02 0.0057 21.1 11.4 27 8-34 13-39 (164)
171 2c2l_A CHIP, carboxy terminus 28.2 77 0.0026 26.0 5.0 28 7-34 5-32 (281)
172 1zu2_A Mitochondrial import re 27.1 1.3E+02 0.0046 23.5 6.0 59 142-205 10-74 (158)
173 2vsy_A XCC0866; transferase, g 25.6 1.4E+02 0.0049 26.8 6.8 27 179-206 128-157 (568)
174 2w2u_A Hypothetical P60 katani 24.9 89 0.0031 21.8 4.1 27 8-34 21-47 (83)
175 2l6j_A TPR repeat-containing p 24.8 1.5E+02 0.005 19.2 6.1 29 6-34 4-32 (111)
176 1w3b_A UDP-N-acetylglucosamine 24.8 2.9E+02 0.01 22.7 17.0 17 190-206 216-232 (388)
177 3caz_A BAR protein; thermo-aci 24.3 3.1E+02 0.01 22.8 11.7 111 12-166 100-210 (294)
178 3mkr_A Coatomer subunit epsilo 24.3 1.8E+02 0.006 23.9 6.7 47 151-206 183-229 (291)
179 2g0u_A Type III secretion syst 24.1 45 0.0015 24.3 2.4 53 131-187 12-68 (92)
180 1ihg_A Cyclophilin 40; ppiase 23.4 1.2E+02 0.0043 26.2 5.7 47 151-206 290-336 (370)
181 2r5s_A Uncharacterized protein 23.4 2.1E+02 0.0073 20.9 6.5 45 152-205 92-136 (176)
182 2kck_A TPR repeat; tetratricop 22.8 1.5E+02 0.0053 18.8 7.7 26 9-34 9-34 (112)
183 2vsy_A XCC0866; transferase, g 22.5 4.1E+02 0.014 23.7 17.9 59 7-70 24-82 (568)
184 3u64_A Protein TP_0956; tetrat 22.5 1.5E+02 0.0052 25.9 6.0 67 127-206 202-269 (301)
185 2v6y_A AAA family ATPase, P60 21.5 1.1E+02 0.0039 21.1 4.1 27 8-34 13-39 (83)
186 2o8p_A 14-3-3 domain containin 21.5 1.5E+02 0.005 25.0 5.4 68 150-229 94-169 (227)
187 4h7y_A Dual specificity protei 21.3 2.3E+02 0.0078 22.6 6.3 75 116-204 9-87 (161)
188 2if4_A ATFKBP42; FKBP-like, al 21.0 1.4E+02 0.0049 25.2 5.5 47 151-206 247-293 (338)
189 3iyk_A VP5; icosahedral virus; 21.0 4E+02 0.014 25.1 8.7 74 19-95 120-199 (526)
190 2vq2_A PILW, putative fimbrial 20.9 2.5E+02 0.0085 20.5 18.2 165 7-205 43-210 (225)
191 3s0r_A De novo designed helica 20.8 85 0.0029 17.6 2.6 17 193-209 3-19 (30)
192 1kt0_A FKBP51, 51 kDa FK506-bi 20.0 2.1E+02 0.0072 25.3 6.6 47 151-206 334-380 (457)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=3.4e-87 Score=582.10 Aligned_cols=212 Identities=55% Similarity=0.845 Sum_probs=207.2
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhh
Q 026717 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (234)
Q Consensus 4 ~~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 83 (234)
.+|+++||+|||||||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 6 ~~re~~v~~AklaeqaeRyddM~~~mk~v~~--~-~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~ 82 (236)
T 3iqu_A 6 MERASLIQKAKLAEQAERYEDMAAFMKGAVE--K-GEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEK 82 (236)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--T-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCC
T ss_pred ccHHHHHHHHHHHHHhccHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHH
Confidence 4799999999999999999999999999998 4 599999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHH
Q 026717 84 VSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDI 163 (234)
Q Consensus 84 ~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~ 163 (234)
++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+++
T Consensus 83 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~i 162 (236)
T 3iqu_A 83 GPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDI 162 (236)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh-------------------hhhhcchhhhc
Q 026717 164 ALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT-------------------RPLRRPLLSWT 218 (234)
Q Consensus 164 a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a-------------------~~l~dni~~W~ 218 (234)
|+++||||||+|||||||||||||||+|+|++||++||+|||+| |+|||||+.|+
T Consensus 163 A~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 163 SKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999996 99999999997
No 2
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=4.4e-87 Score=584.70 Aligned_cols=218 Identities=51% Similarity=0.813 Sum_probs=204.0
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 026717 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (234)
Q Consensus 3 ~~~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (234)
|.+|+++||+|||||||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++.+|++.
T Consensus 1 m~~re~lv~~AklaeqaeRyddM~~~Mk~v~~--~-~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~ 77 (248)
T 3uzd_A 1 MVDREQLVQKARLAEQAERYDDMAAAMKNVTE--L-NEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEK 77 (248)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC
T ss_pred CCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHH
Confidence 45899999999999999999999999999998 3 59999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCc--hhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHH
Q 026717 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAG--ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (234)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~--eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (234)
+++.+++||+||++||..+|++||++||++|||.++++ |++|||+|||||||||+|||..|++|++++++|+++|++|
T Consensus 78 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A 157 (248)
T 3uzd_A 78 KIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEA 157 (248)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh-------------------hhhhcchhhhcccc
Q 026717 161 QDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT-------------------RPLRRPLLSWTLWV 221 (234)
Q Consensus 161 ~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a-------------------~~l~dni~~W~~~~ 221 (234)
+++|+++||||||||||||||||||||||+|+|++||.+||+|||+| |+|||||+.|+.+.
T Consensus 158 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~ 237 (248)
T 3uzd_A 158 HEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQ 237 (248)
T ss_dssp HHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccC
Confidence 99999999999999999999999999999999999999999999996 99999999999886
Q ss_pred CC
Q 026717 222 KN 223 (234)
Q Consensus 222 ~~ 223 (234)
.+
T Consensus 238 ~~ 239 (248)
T 3uzd_A 238 QD 239 (248)
T ss_dssp --
T ss_pred cc
Confidence 43
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=2.2e-86 Score=582.70 Aligned_cols=214 Identities=63% Similarity=0.980 Sum_probs=207.2
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 026717 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (234)
Q Consensus 3 ~~~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (234)
|.+|++++|+|||+|||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++.+|++.
T Consensus 28 m~~re~lv~~AKLaeqaeRYddMv~~MK~v~~--~-~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~ 104 (261)
T 3ubw_A 28 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--M-DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 104 (261)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred hhhHHHHHHHHHHHHHhccHHHHHHHHHHHHh--c-CCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHH
Confidence 45899999999999999999999999999998 3 59999999999999999999999999999999999998889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Q 026717 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (234)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (234)
+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 105 ~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~ 184 (261)
T 3ubw_A 105 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 184 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh-------------------hhhhcchhhhcc
Q 026717 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT-------------------RPLRRPLLSWTL 219 (234)
Q Consensus 163 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a-------------------~~l~dni~~W~~ 219 (234)
+|+++||||||+|||||||||||||||+|+|++||++||+|||+| |+|||||+.|+.
T Consensus 185 iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts 260 (261)
T 3ubw_A 185 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 260 (261)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999996 999999999985
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=8.4e-85 Score=567.60 Aligned_cols=213 Identities=63% Similarity=0.988 Sum_probs=206.4
Q ss_pred CCcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 026717 3 TPTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (234)
Q Consensus 3 ~~~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (234)
|++|++++|+|||++||||||||+++||++++ . +++||.||||||||||||+||++|+|||+|+++||+++++|++.
T Consensus 2 m~~re~~v~~AklaeqaeRyddm~~~mk~v~~--~-~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~ 78 (234)
T 2br9_A 2 MDDREDLVYQAKLAEQAERYDEMVESMKKVAG--M-DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGED 78 (234)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--T-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred cchHHHHHHHHHHHHHHhCHHHHHHHHHHHhc--c-cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchH
Confidence 45799999999999999999999999999998 3 58999999999999999999999999999999999998888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Q 026717 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (234)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (234)
+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 79 ~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~ 158 (234)
T 2br9_A 79 KLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASD 158 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh-------------------hhhhcchhhhc
Q 026717 163 IALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT-------------------RPLRRPLLSWT 218 (234)
Q Consensus 163 ~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a-------------------~~l~dni~~W~ 218 (234)
+|+.+||||||+||||+||||||||||+|+|++||++||+|||+| |+|||||+.|+
T Consensus 159 iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWt 233 (234)
T 2br9_A 159 IAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 233 (234)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhc
Confidence 999899999999999999999999999999999999999999996 99999999997
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=3.3e-84 Score=570.60 Aligned_cols=215 Identities=70% Similarity=1.050 Sum_probs=207.9
Q ss_pred CcHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCC--CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccch
Q 026717 4 PTREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPA--TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE 81 (234)
Q Consensus 4 ~~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~--~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~ 81 (234)
++|++++|+|||++|+||||||+++||++++ . + ++||.||||||||||||+||++|+|||+|+++||+++.+|++
T Consensus 6 ~~re~~v~~AkLaeqaeRyddm~~~mk~v~~-~--~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~ 82 (260)
T 1o9d_A 6 TAREENVYMAKLAEQAERYEEMVEFMEKVSN-S--LGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNE 82 (260)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-T--CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHc-c--CCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcH
Confidence 4799999999999999999999999999998 3 5 899999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHH
Q 026717 82 EHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQ 161 (234)
Q Consensus 82 ~~~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 161 (234)
.+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+
T Consensus 83 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 162 (260)
T 1o9d_A 83 EHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQ 162 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh-------------------hhhhcchhhhcccc
Q 026717 162 DIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT-------------------RPLRRPLLSWTLWV 221 (234)
Q Consensus 162 ~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a-------------------~~l~dni~~W~~~~ 221 (234)
++|+.+||||||+||||+||||||||||+|+|++||.|||+|||+| |+|||||+.|+.+.
T Consensus 163 ~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~ 241 (260)
T 1o9d_A 163 DIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 241 (260)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC--
T ss_pred HHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhcc
Confidence 9999899999999999999999999999999999999999999996 99999999999763
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=1.2e-83 Score=566.80 Aligned_cols=212 Identities=58% Similarity=0.930 Sum_probs=205.1
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCC---CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccch
Q 026717 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPA---TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNE 81 (234)
Q Consensus 5 ~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~---~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~ 81 (234)
+|++++|+|||++|+||||||+++||++++ . + ++||.||||||||||||+||++|+|||+|+++||+++++|++
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~-~--~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~ 103 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVE-A--RQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAE 103 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-S--CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-c--cCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcH
Confidence 599999999999999999999999999998 3 5 899999999999999999999999999999999999888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHH
Q 026717 82 EHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQ 161 (234)
Q Consensus 82 ~~~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~ 161 (234)
.+++.+++||+||++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|+++|++|+
T Consensus 104 ~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~ 183 (260)
T 2npm_A 104 DASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDAT 183 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh-------------------hhhhcchhhhccc
Q 026717 162 DIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT-------------------RPLRRPLLSWTLW 220 (234)
Q Consensus 162 ~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a-------------------~~l~dni~~W~~~ 220 (234)
++| .+||||||+|||||||||||||||+|+|++||++||+|||+| |+|||||+.|+.+
T Consensus 184 ~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 184 VVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp HHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 999 899999999999999999999999999999999999999996 9999999999863
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=3.8e-83 Score=563.58 Aligned_cols=218 Identities=22% Similarity=0.380 Sum_probs=187.3
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhh-hcccc-hh
Q 026717 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EGRKN-EE 82 (234)
Q Consensus 5 ~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~-~~~~~-~~ 82 (234)
+|++++|+|||+|||||||||+++| ++ . +++||.||||||||||||+||++|+|||+|+++||++ +.+|+ +.
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e--~-~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~ 101 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TE--S-SDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNE 101 (268)
T ss_dssp ------------------CHHHHHH---TC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---Hh--c-CCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHH
Confidence 6999999999999999999999999 65 3 5999999999999999999999999999999999999 77787 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHH
Q 026717 83 HVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQD 162 (234)
Q Consensus 83 ~~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~ 162 (234)
+++.+++||+||++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|+++|++|++
T Consensus 102 ~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~e 180 (268)
T 3efz_A 102 FIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQ 180 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhcC--CCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh---h---------------hhhhcchhhhccccC
Q 026717 163 IALTDL--APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL---T---------------RPLRRPLLSWTLWVK 222 (234)
Q Consensus 163 ~a~~~L--~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~---a---------------~~l~dni~~W~~~~~ 222 (234)
+|+++| |||||||||||||||||||||+|+|++||++||+|||+ | |+|||||+.|+.+..
T Consensus 181 iA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~eestlImQLLRDNLtlWtsd~~ 260 (268)
T 3efz_A 181 RERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENTEKLLKILRDNVSQWEQGCS 260 (268)
T ss_dssp HHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHHHHHHHHHHHHHHHhhcccc
Confidence 999899 99999999999999999999999999999999999999 4 999999999999988
Q ss_pred CCceEee
Q 026717 223 NPTRIAL 229 (234)
Q Consensus 223 ~~~~~~~ 229 (234)
+--+-++
T Consensus 261 ~~~~~~~ 267 (268)
T 3efz_A 261 GLLTSAF 267 (268)
T ss_dssp TTCCCCC
T ss_pred chhHhcc
Confidence 7655443
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=5.6e-79 Score=526.72 Aligned_cols=199 Identities=21% Similarity=0.270 Sum_probs=187.1
Q ss_pred cHHhHH---HHHHHHHHhCCHHHHHHHHHHHhhc---cCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcc
Q 026717 5 TREQYV---YLAKLAEQAERYEEMVKFMDSLVTS---STPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGR 78 (234)
Q Consensus 5 ~re~li---~~Aklaeq~eRy~Dm~~~mk~~~~~---~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~ 78 (234)
+|++++ |+|||++||||||||+++||++++. . +++||.||||||||||||+||++|+|||+|+++||++ +
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~--~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k 77 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFE--NSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--L 77 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--C
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcc--CCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--c
Confidence 589999 9999999999999999999999972 3 4899999999999999999999999999999999998 6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHH
Q 026717 79 KNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYK 158 (234)
Q Consensus 79 ~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~ 158 (234)
|++.+++.+++||++|++||..+|++|+++||++|||.+ |++|||+|||||||||+|||..|+ +++|+++|+
T Consensus 78 ~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~ 149 (227)
T 2o8p_A 78 NNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQ 149 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHH
Confidence 788899999999999999999999999999999999997 999999999999999999999998 899999999
Q ss_pred HHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh--------------------hhhhcchh
Q 026717 159 AAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT--------------------RPLRRPLL 215 (234)
Q Consensus 159 ~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a--------------------~~l~dni~ 215 (234)
+|+++|+++||||||+||||+||||||||||+|+|++||.+|++|||.+ |.|||||.
T Consensus 150 ~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 150 DAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999984 89999985
No 9
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.12 E-value=0.22 Score=46.69 Aligned_cols=97 Identities=10% Similarity=0.055 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 026717 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (234)
Q Consensus 96 ~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 175 (234)
+|-..+|...+.+-.+.|=|.. + ...=-+.-.|..|+..-. -+.|...|++|+++-+..|+|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~H--p-~~a~~~~nLa~~y~~~g~----------~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTN--L-YVLRLLSIASEVLSYLQA----------YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTS--H-HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--H-HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 4566777788887777664432 1 122223333444433321 35689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 176 LGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+....|.++.|+. .|+.++|..+.++|++-
T Consensus 393 a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 9999999999887 79999999999999875
No 10
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.09 E-value=0.98 Score=35.86 Aligned_cols=74 Identities=22% Similarity=0.157 Sum_probs=57.8
Q ss_pred HHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 026717 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ 202 (234)
Q Consensus 123 kVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~ 202 (234)
.+..+...|..|...-+ .+.|...|++|+++.+...++.+|.......+.+..++. .|+.++|+...++
T Consensus 126 ~~~~~~~la~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~ 194 (283)
T 3edt_B 126 VAKQLNNLALLCQNQGK----------AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKE 194 (283)
T ss_dssp HHHHHHHHHHHHHTTTC----------HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34444555665544322 467899999999999888888999888888888888877 7999999999999
Q ss_pred Hhhhh
Q 026717 203 EKTLT 207 (234)
Q Consensus 203 Afd~a 207 (234)
++...
T Consensus 195 ~l~~~ 199 (283)
T 3edt_B 195 ILTRA 199 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 11
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=95.00 E-value=1.3 Score=36.88 Aligned_cols=73 Identities=7% Similarity=0.033 Sum_probs=56.5
Q ss_pred HHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 026717 124 VFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQE 203 (234)
Q Consensus 124 Vfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~A 203 (234)
+-.+...|..|..+-+ -++|...|++|+++++ .++..+|....+..|.+..|++ +|+.++|+...++|
T Consensus 155 ~~~~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 155 LYIENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 3335555766654432 4678999999999886 4666777777788999999987 89999999999999
Q ss_pred hhhhh
Q 026717 204 KTLTR 208 (234)
Q Consensus 204 fd~a~ 208 (234)
++.+.
T Consensus 223 l~~~~ 227 (293)
T 3u3w_A 223 IEISC 227 (293)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98753
No 12
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.69 E-value=0.21 Score=45.83 Aligned_cols=57 Identities=9% Similarity=0.025 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
-+.|...|++|+++-+..++|.||.......|.++.|.. .|+.++|..+.++|++-.
T Consensus 345 ~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 345 LEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999887 899999999999998763
No 13
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.64 E-value=0.37 Score=44.41 Aligned_cols=97 Identities=13% Similarity=0.089 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchh
Q 026717 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR 175 (234)
Q Consensus 96 ~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir 175 (234)
+|...++...+.+-.+.|=|... ..+=-+.-.|.-|+.+- + -+.|...|++|+++-++.++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp---~~a~~~~nLa~~y~~~g-----~-----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNV---YMLHMMYQAMGVCLYMQ-----D-----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSH---HHHHHHHHHHHHHHHTT-----C-----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhch---HHHHHHHHHHHHHHhhc-----C-----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 45667777778777776644431 11111222333333221 1 35689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 176 LGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.....|.++-|+. .|+.++|..+-++|++-
T Consensus 382 a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAAGEKALKKAIAI 411 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHHHHHHHHHHHHH
Confidence 9999999998887 89999999999999875
No 14
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.59 E-value=1.1 Score=34.03 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=87.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSL 86 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~ 86 (234)
.-...++.+..+-|+|++++++++++++ . +|. +.+=...++.+|-. .+....+...+.......... .......
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~ 79 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLK-A--DPN-NVETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTS-AEAYYIL 79 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--CCC-CHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchh-HHHHHHH
Confidence 4556789999999999999999999998 2 244 45555666666644 344445555544332221111 1001111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHh
Q 026717 87 VKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (234)
Q Consensus 87 i~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (234)
..-+.. .-.++-.......+.+ -|.. ...+...|..|.-+ |+ -+.|.+.|++|+++
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~-----~~~~------~~~~~~lg~~~~~~-----g~-----~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIAL-----NTVY------ADAYYKLGLVYDSM-----GE-----HDKAIEAYEKTISI-- 136 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC------HHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----Cccc------hHHHHHHHHHHHHh-----CC-----chhHHHHHHHHHHh--
Confidence 011111 0011112222222221 2221 11233345544322 11 35688889988864
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.|.+| ....|.+..|+. +|+.++|+..-++|++.
T Consensus 137 ---~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 137 ---KPGFI---RAYQSIGLAYEG-KGLRDEAVKYFKKALEK 170 (184)
T ss_dssp ---CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred ---cchhh---hHHHHHHHHHHH-CCCHHHHHHHHHHHHhC
Confidence 44554 344556666655 89999999999998864
No 15
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.42 E-value=1.6 Score=35.26 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=101.4
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccC--C--CCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhh-hc--cc
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSST--P--ATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EG--RK 79 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~--~--~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~-~~--~~ 79 (234)
+-+..++.+....|+|++++.+++++++... . ..+....-...++.+|-. .+....+...+....... .. ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 4566788889999999999999998885210 0 011122223334444322 233334444433211110 00 00
Q ss_pred chh----hHHHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHH
Q 026717 80 NEE----HVSLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTM 154 (234)
Q Consensus 80 ~~~----~~~~i~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~ 154 (234)
.+. ...+..-|.. .=-++-.......+++.....-+. ....+..+-..|..|... |+ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 000 0111111111 111233334444444443322111 122333344445544332 11 46789
Q ss_pred HHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 155 LSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 155 ~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
+.|++|+++.....++.+|.......+.+..++. .|+.++|+...+++++..
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 9999999999888888899888888888888776 799999999999999754
No 16
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=94.18 E-value=2.4 Score=36.26 Aligned_cols=188 Identities=16% Similarity=0.109 Sum_probs=99.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (234)
..+..++....+.|+|++++.+++++++. ++. +.+ =...+..+|-. .+....+...+....+..+..+...
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQA---GTE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHh---ccc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 45667888889999999999999999972 243 222 23344444432 3444555554433222111111111
Q ss_pred -hH----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhh-------cccchHHHH
Q 026717 83 -HV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEF-------KVGDERKAA 149 (234)
Q Consensus 83 -~~----~~i~~yr-~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~-------~~~~~~~~~ 149 (234)
.. .+..-|. ..--++-...+...+++.... .+.......+...|..|...-.. ...++-...
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~ 198 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEA 198 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHH
Confidence 00 1111111 111233344445555544332 12233344455556666554430 001122344
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|++++... +.+|.......+.+..++. .|+.++|+...++|++..
T Consensus 199 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 253 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDL--GDRGAQGRACGNLGNTYYL-LGDFQAAIEHHQERLRIA 253 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHH
Confidence 678888999998888643 2334444455555555554 899999999998888765
No 17
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=94.06 E-value=0.79 Score=39.56 Aligned_cols=75 Identities=13% Similarity=0.157 Sum_probs=51.6
Q ss_pred hHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 026717 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (234)
Q Consensus 122 skVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk 201 (234)
...+|+-.+|.+|...-. -+.|...|++|++++.. . +.+|..-....+.+..|+. +|+.++|+...+
T Consensus 101 l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~ 167 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQRE----------YLSAIKFFKKAESKLIF-V-KDRIEKAEFFFKMSESYYY-MKQTYFSMDYAR 167 (383)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHhh-C-CCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 455667778887754432 45689999999988763 3 2333344444555666665 899999999999
Q ss_pred HHhhhhhh
Q 026717 202 QEKTLTRP 209 (234)
Q Consensus 202 ~Afd~a~~ 209 (234)
+|++....
T Consensus 168 ~al~~~~~ 175 (383)
T 3ulq_A 168 QAYEIYKE 175 (383)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99987543
No 18
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=93.82 E-value=2.6 Score=35.47 Aligned_cols=189 Identities=13% Similarity=0.052 Sum_probs=98.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (234)
..+..++..+-+.|+|++++.++.++++. ++. +.+ =...++.+|-. .+....+...+.....-....+...
T Consensus 10 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 10 LELALEGERLCKSGDCRAGVSFFEAAVQV---GTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhc---Ccc-cHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccH
Confidence 45677888999999999999999999972 233 222 23344444432 3444444444432111111111111
Q ss_pred h-H----HHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhh-------hcc---cchH
Q 026717 83 H-V----SLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE-------FKV---GDER 146 (234)
Q Consensus 83 ~-~----~~i~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE-------~~~---~~~~ 146 (234)
. . .+..-|.. .--++-...+...+++.... .+....+..+-..|..|...-. ... .++.
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 0 0 11111111 11233344445555544332 1223334444555555554443 000 1233
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhh
Q 026717 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (234)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a~ 208 (234)
....+.|...|++|+.++... +.+|.......|.+..++. .|+.++|+...++|+....
T Consensus 160 ~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHH
Confidence 444677888888888887642 3345554555566665555 7999999999888887653
No 19
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.67 E-value=0.74 Score=36.60 Aligned_cols=56 Identities=14% Similarity=0.066 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+.+.+....|.||.......|.+..++. .|+.++|+...+++++.
T Consensus 101 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 101 YKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 356899999999999888888899999999999888876 79999999999999876
No 20
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=93.42 E-value=0.77 Score=39.71 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=54.0
Q ss_pred chhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHH
Q 026717 120 GESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTM 199 (234)
Q Consensus 120 ~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~i 199 (234)
+....+|+-.+|.++...-. -+.|...|++|++++.. + +.+|..-....|.+.+|+. +|+.++|+..
T Consensus 97 ~~l~~~~~~~~g~~~~~~g~----------~~~A~~~~~~al~~~~~-~-~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~ 163 (378)
T 3q15_A 97 GLLKYYSLFFRGMYEFDQKE----------YVEAIGYYREAEKELPF-V-SDDIEKAEFHFKVAEAYYH-MKQTHVSMYH 163 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHTTGGG-C-CCHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHhh-C-CChHHHHHHHHHHHHHHHH-cCCcHHHHHH
Confidence 34456677788887655432 35689999999988763 3 2345555556666777765 8999999999
Q ss_pred HHHHhhhhh
Q 026717 200 AKQEKTLTR 208 (234)
Q Consensus 200 Ak~Afd~a~ 208 (234)
.++|++...
T Consensus 164 ~~~al~~~~ 172 (378)
T 3q15_A 164 ILQALDIYQ 172 (378)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987653
No 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.91 E-value=0.24 Score=45.73 Aligned_cols=55 Identities=7% Similarity=-0.038 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++.++.|.|.||..+...-|.+.-|.. +|+.++|..+.++|++-
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKP 369 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999888877 89999999999999865
No 22
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=92.72 E-value=3.7 Score=34.04 Aligned_cols=76 Identities=7% Similarity=0.023 Sum_probs=53.0
Q ss_pred chhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHH
Q 026717 120 GESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTM 199 (234)
Q Consensus 120 ~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~i 199 (234)
....+..+...|..|...-+ -+.|...|++|+++++. .+........+..|.+..|+. +|+.++|+..
T Consensus 151 ~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~~y~~-~~~y~~Al~~ 218 (293)
T 2qfc_A 151 VYQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYL-DSRYEESLYQ 218 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHHHHHH-HhhHHHHHHH
Confidence 33345456667777655432 35689999999999863 332222233577788887776 8999999999
Q ss_pred HHHHhhhh
Q 026717 200 AKQEKTLT 207 (234)
Q Consensus 200 Ak~Afd~a 207 (234)
.++|++..
T Consensus 219 ~~kal~~~ 226 (293)
T 2qfc_A 219 VNKAIEIS 226 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 23
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=92.70 E-value=3.3 Score=33.37 Aligned_cols=189 Identities=12% Similarity=0.039 Sum_probs=101.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHH----HHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVE----ERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE 82 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~e----ERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~ 82 (234)
..+...+....+.|+|++++.+++++++. .+. +.+ =...++.+|-. .+....+...+....+.....+...
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~---~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 80 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQV---GTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQL 80 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhh---Ccc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccH
Confidence 56778899999999999999999999972 133 222 12233444332 3334444444432211111111111
Q ss_pred h-H----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhc----------ccchH
Q 026717 83 H-V----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFK----------VGDER 146 (234)
Q Consensus 83 ~-~----~~i~~yr-~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~----------~~~~~ 146 (234)
. . .+..-|. ..--++-.......+++... ..+....+..+...|..|...-... ..++-
T Consensus 81 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a 155 (338)
T 3ro2_A 81 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDV 155 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhH
Confidence 1 0 1111111 11123334444445554433 2233444555667777777665511 01222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhh
Q 026717 147 KAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (234)
Q Consensus 147 ~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a~ 208 (234)
....+.|...|++|+.++... +.+|.......+.+..++. .|+.++|+...+++++...
T Consensus 156 ~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 156 RNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHH
Confidence 334677888888888887642 2334444445555555554 7999999999998887653
No 24
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=92.27 E-value=0.31 Score=45.65 Aligned_cols=55 Identities=16% Similarity=0.006 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++.++.|.|.||-.+...-|.+..|.. .|+.++|..+.++|++-
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i 380 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDG 380 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 45788899999999999999999999999999988887 79999999999999875
No 25
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=92.02 E-value=5.3 Score=34.19 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=50.2
Q ss_pred hhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHH
Q 026717 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMA 200 (234)
Q Consensus 121 eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iA 200 (234)
....-.+-..|..|..+-. -+.|...|++|+++... .+.. +.+.+.+++.--..|.-+|+.++|+...
T Consensus 140 ~~~a~~~~~lg~~~~~~~~----------~~~A~~~~~~al~~~~~-~~~~-~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 207 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQ----------TYFSMDYARQAYEIYKE-HEAY-NIRLLQCHSLFATNFLDLKQYEDAISHF 207 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHT-CSTT-HHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-Cccc-hHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3344445556766665432 35689999999999874 3332 4444544444334444489999999999
Q ss_pred HHHhhhhhh
Q 026717 201 KQEKTLTRP 209 (234)
Q Consensus 201 k~Afd~a~~ 209 (234)
++|++.+..
T Consensus 208 ~~al~~~~~ 216 (383)
T 3ulq_A 208 QKAYSMAEA 216 (383)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999877543
No 26
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=91.01 E-value=5 Score=31.91 Aligned_cols=54 Identities=15% Similarity=0.027 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.|...|++|+++....-.+.++.......+.+.+|+ ..|+.++|+...++|+..
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~ 250 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYT-INRDKVKADAAWKNILAL 250 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhc
Confidence 378889999998864333222223344455555555 489999999999999865
No 27
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=90.26 E-value=0.36 Score=44.33 Aligned_cols=55 Identities=13% Similarity=-0.036 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++.++.|+|.||..+...-|.+.-|.. .|+.++|..+.+++++-
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i 358 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEP 358 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 45677788888777778999999999999999888776 79999999999998865
No 28
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=90.24 E-value=6.1 Score=31.71 Aligned_cols=56 Identities=18% Similarity=0.012 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a~ 208 (234)
.+.|.+.|++|++++... .+|...+.+++.-...|...|+.++|....+++++...
T Consensus 199 ~~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 254 (338)
T 3ro2_A 199 FRDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 254 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 356888899998888642 23334444444434444458999999999998887653
No 29
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.11 E-value=8.9 Score=33.36 Aligned_cols=52 Identities=13% Similarity=0.085 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-++|.+.|++|+++ .|.++..-.+.+++..|.+...|+.++|+..-++|+..
T Consensus 350 ~~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i 401 (472)
T 4g1t_A 350 YEEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKI 401 (472)
T ss_dssp HHHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 35689999999853 34555555667788888777789999999988888753
No 30
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=90.04 E-value=3.8 Score=29.05 Aligned_cols=73 Identities=18% Similarity=0.164 Sum_probs=44.2
Q ss_pred HHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 026717 123 KVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQ 202 (234)
Q Consensus 123 kVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~ 202 (234)
.+..+...|..|...-+ .+.|...|++|++++... +.+|.......|.+..++. .|+.++|+...++
T Consensus 48 ~~~~~~~l~~~~~~~g~----------~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 114 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGE----------FETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTL-LQDYEKAIDYHLK 114 (164)
T ss_dssp HHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 33444455655544322 356778888888877642 2223334445555655555 7888888888888
Q ss_pred Hhhhhh
Q 026717 203 EKTLTR 208 (234)
Q Consensus 203 Afd~a~ 208 (234)
|++.+.
T Consensus 115 a~~~~~ 120 (164)
T 3ro3_A 115 HLAIAQ 120 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 31
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=90.00 E-value=8.2 Score=32.80 Aligned_cols=70 Identities=10% Similarity=-0.052 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhhhhcchhhhccccC
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRPLRRPLLSWTLWVK 222 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a~~l~dni~~W~~~~~ 222 (234)
.+.|...|++|++++... +.++.......+.+..|.. +|+.++|....++|++....+.+....|....+
T Consensus 319 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 388 (411)
T 4a1s_A 319 FNTAIEYHNRHLAIAQEL--GDRIGEARACWSLGNAHSA-IGGHERALKYAEQHLQLAXXXXXXXXXXXXXXX 388 (411)
T ss_dssp HHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHC--CChHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHhhcccchhhhhhhhh
Confidence 466899999999998743 2334444455566665554 899999999999999998777666666654433
No 32
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=89.85 E-value=6.9 Score=31.71 Aligned_cols=48 Identities=10% Similarity=0.012 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++. |.+| ....+.+..++. +|+.++|....+++++.
T Consensus 252 ~~~A~~~~~~a~~~~-----~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 299 (330)
T 3hym_B 252 YAEALDYHRQALVLI-----PQNA---STYSAIGYIHSL-MGNFENAVDYFHTALGL 299 (330)
T ss_dssp HHHHHHHHHHHHHHS-----TTCS---HHHHHHHHHHHH-HTCHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHhhC-----ccch---HHHHHHHHHHHH-hccHHHHHHHHHHHHcc
Confidence 456888899988753 3443 234455555555 89999999999988865
No 33
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=89.43 E-value=12 Score=33.82 Aligned_cols=174 Identities=17% Similarity=0.134 Sum_probs=94.4
Q ss_pred HhHHHHHHHHHHhCCH-HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHH
Q 026717 7 EQYVYLAKLAEQAERY-EEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (234)
Q Consensus 7 e~li~~Aklaeq~eRy-~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~ 85 (234)
+-+..++++....|+| ++++.++++.++ . +|. +.+=...+..+|-. .+....|...+....+.... ......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~-~--~p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~--~~~~~~ 175 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVK-L--EPE-LVEAWNQLGEVYWK-KGDVTSAHTCFSGALTHCKN--KVSLQN 175 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHHHHTTCCC--HHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHh-h--CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCC--HHHHHH
Confidence 4456677777788899 999999988887 2 133 45556666666644 34455555554332221110 011111
Q ss_pred HHHHHHH----------HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHH
Q 026717 86 LVKDYRS----------KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (234)
Q Consensus 86 ~i~~yr~----------ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (234)
+..-|.. .=-++-...++..+++ -|.. . ..+-..|..|..+. +..+. ...-.+.|..
T Consensus 176 lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~----~--~~~~~lg~~~~~~~-~~~~~-~~g~~~~A~~ 242 (474)
T 4abn_A 176 LSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD----G--RSWYILGNAYLSLY-FNTGQ-NPKISQQALS 242 (474)
T ss_dssp HHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC----H--HHHHHHHHHHHHHH-HHTTC-CHHHHHHHHH
T ss_pred HHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC----H--HHHHHHHHHHHHHH-Hhhcc-ccchHHHHHH
Confidence 1111111 1112333334444432 1321 1 22344566554431 12222 1223677899
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 156 aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.|++|+++ .|.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 243 ~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l 287 (474)
T 4abn_A 243 AYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAAL 287 (474)
T ss_dssp HHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 99999876 33223555677788887776 79999999999988765
No 34
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=89.12 E-value=1.2 Score=32.77 Aligned_cols=48 Identities=15% Similarity=0.280 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|.+.|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+..
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 46789999999875 45554 355677887777 89999999999999865
No 35
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=88.23 E-value=12 Score=32.20 Aligned_cols=48 Identities=8% Similarity=0.050 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++ .|.+| ....+.+..+. ..|+.++|+...++++..
T Consensus 311 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~-~~~~~~~A~~~~~~al~~ 358 (450)
T 2y4t_A 311 PVEAIRVCSEVLQM-----EPDNV---NALKDRAEAYL-IEEMYDEAIQDYETAQEH 358 (450)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 45678888888764 34444 34445555554 489999999999999875
No 36
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=87.86 E-value=9.9 Score=30.99 Aligned_cols=48 Identities=6% Similarity=-0.004 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++ .|.+| ....+.+..++. .|+.++|+...++|++.
T Consensus 288 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~g~~~~A~~~~~~a~~~ 335 (359)
T 3ieg_A 288 PVEAIRICSEVLQM-----EPDNV---NALKDRAEAYLI-EEMYDEAIQDYEAAQEH 335 (359)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 35678888888764 34444 355566666554 89999999999998865
No 37
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=87.28 E-value=8.6 Score=30.46 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=37.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (234)
+.++.+|...-+.|+|++++..++++++ . +|. +.+-...++.+|-. .+..-.|...+.
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~--~-~p~-~~~~~~~l~~~~~~-~~~~~~A~~~~~ 61 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEA--K-KYN-SPYIYNRRAVCYYE-LAKYDLAQKDIE 61 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHH--T-TCC-CSTTHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH--h-CCC-cHHHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 5788999999999999999999999997 2 243 22233444444432 333444444443
No 38
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=87.17 E-value=13 Score=31.70 Aligned_cols=55 Identities=7% Similarity=0.096 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a~ 208 (234)
-+.|...|++|+++++..- +|.......|.+..++. .|+.++|+...++|++.+.
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 4678999999999987543 44444455566666665 8999999999999998753
No 39
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=86.52 E-value=18 Score=32.46 Aligned_cols=48 Identities=6% Similarity=0.072 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|.+.|++++++ .|.+| ....+.+..|. ..|+.++|.+..+++++.
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~~~~-~~g~~~~A~~~~~~~l~~ 579 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIALVYL-HKKIPGLAITHLHESLAI 579 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHH-HhCCHHHHHHHHHHHHhc
Confidence 45688888888765 35555 33344444444 489999999999998865
No 40
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.45 E-value=15 Score=31.50 Aligned_cols=178 Identities=11% Similarity=-0.006 Sum_probs=90.5
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHH-----HHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhh
Q 026717 9 YVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEE-----RNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEH 83 (234)
Q Consensus 9 li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eE-----RnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~ 83 (234)
+..++++....|+|++++++++++.... +.++... ++++...+. ..+..-.+..............+....
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~ 133 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYM---MQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFL 133 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHH---HTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH---HHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHH
Confidence 6789999999999999999999988632 4454432 122222211 111112222222111111000111100
Q ss_pred HHHHHHHHHHHH------HHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHH
Q 026717 84 VSLVKDYRSKVE------SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSY 157 (234)
Q Consensus 84 ~~~i~~yr~ki~------~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY 157 (234)
...+.....++. .+...+.++++... +...+....+-++-..|..|.-+-. -++|...|
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~ 198 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREF-----KKLDDKPSLVDVHLLESKVYHKLRN----------LAKSKASL 198 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----TTSSCSTHHHHHHHHHHHHHHHTTC----------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHH-----HhcccchhHHHHHHHHHHHHHHhCc----------HHHHHHHH
Confidence 011111111111 12222222322222 1222333455455555555433221 35689999
Q ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 158 KAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 158 ~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
++|..++.. .+ ..|.-.|...+...-+|...++.++|+..-.++|+..
T Consensus 199 ~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~ 246 (434)
T 4b4t_Q 199 TAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESY 246 (434)
T ss_dssp HHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 999998863 43 2334446666666667777899999999999988764
No 41
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=86.38 E-value=16 Score=31.99 Aligned_cols=54 Identities=9% Similarity=0.134 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHh----------CCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEIL----------NSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~----------~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++.... +.-...+|..++.+..++. . |+.++|+...++++..
T Consensus 394 ~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~A~~~~~~a~~~ 457 (537)
T 3fp2_A 394 FDTAIKQYDIAKRLEEVQ--EKIHVGIGPLIGKATILAR-QSSQDPTQLDEEKFNAAIKLLTKACEL 457 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--SSCSSTTHHHHHHHHHHHH-HHTC----CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcc--hhhHHHHHHHHHHHHHHHH-HhhccchhhhHhHHHHHHHHHHHHHHh
Confidence 457899999999887532 2233556666777766665 5 9999999999988865
No 42
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=86.26 E-value=13 Score=30.76 Aligned_cols=59 Identities=17% Similarity=0.213 Sum_probs=35.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (234)
+-+..++.+....|+|++++.+++++++ . +|. +.+=...+..+|-. .+....+...+..
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~-~--~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 157 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLE-L--KPD-NQTALMALAVSFTN-ESLQRQACEILRD 157 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHh-c--CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4456677777888888888888888776 2 133 44445555555543 3444455555543
No 43
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=86.12 E-value=10 Score=29.49 Aligned_cols=61 Identities=13% Similarity=0.015 Sum_probs=41.9
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 026717 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (234)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (234)
-+.+..++.+..+.|+|++++.++.++++ . +++-+..-...+..+|-. .+....|...+..
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~-~--~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLK-L--TNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--TTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh-c--cCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 36788899999999999999999999997 2 242344444445555543 4555566665543
No 44
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=85.85 E-value=18 Score=31.81 Aligned_cols=49 Identities=8% Similarity=0.180 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|+++ .|.+| ....+.+..|+. .|+.++|+...+++++..
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHhC
Confidence 45678888888764 45555 344566666555 899999999999988763
No 45
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=85.79 E-value=11 Score=29.47 Aligned_cols=58 Identities=12% Similarity=0.042 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (234)
-+..+|.+..+.|+|++++.+++++++ . ++. +.+-...+..+|-. .+..-.+...+..
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~-~--~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 96 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALE-I--DPS-SADAHAALAVVFQT-EMEPKLADEEYRK 96 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHh-c--CCC-hHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 356777888888999999999888886 2 133 34444555555533 3444555555543
No 46
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=84.86 E-value=1.6 Score=32.76 Aligned_cols=56 Identities=16% Similarity=0.140 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHhhcC---CCC-------CchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDL---APT-------HPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L---~pt-------~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|...|++|+.+..... .|. +|....+..|.+..|+. +|+.++|+..+.+|+..
T Consensus 27 ~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~~ 92 (162)
T 3rkv_A 27 YKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhc
Confidence 3568999999998865321 233 67778888999888876 79999999999998865
No 47
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=84.73 E-value=30 Score=33.60 Aligned_cols=164 Identities=12% Similarity=0.138 Sum_probs=84.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh-hhhhhhcccchhhHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS-IEQKEEGRKNEEHVS 85 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~-ieqk~~~~~~~~~~~ 85 (234)
+-+..++.+..+.|+|++++.+.++.+++ +|+. .+=.+-|..+|.. .+..-.|...+.. ++.... . .+....
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l---~P~~-~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~-~-~~a~~n 82 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEV---FPEF-AAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPT-F-ADAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CSCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT-C-HHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC-C-HHHHHH
Confidence 55678899999999999999999999982 2553 4445556666654 3444444444432 111110 0 011111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Q 026717 86 LVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (234)
Q Consensus 86 ~i~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (234)
+-.-|.+ .=-++-....+..+++ -|.. ..+ +...|..|+-+- + .+.|.++|++|+++
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l-----~P~~----~~a--~~~Lg~~~~~~g-----~-----~~eAi~~~~~Al~l- 140 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQI-----NPAF----ADA--HSNLASIHKDSG-----N-----IPEAIASYRTALKL- 140 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHTT-----C-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHcC-----C-----HHHHHHHHHHHHHh-
Confidence 1111111 0011112222222222 1221 112 223344443221 1 45688889988864
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 165 LTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 165 ~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.|.+|- ...|.+..+ ..+|+.++|++..+++.+..
T Consensus 141 ----~P~~~~---a~~~L~~~l-~~~g~~~~A~~~~~kal~l~ 175 (723)
T 4gyw_A 141 ----KPDFPD---AYCNLAHCL-QIVCDWTDYDERMKKLVSIV 175 (723)
T ss_dssp ----CSCCHH---HHHHHHHHH-HHTTCCTTHHHHHHHHHHHH
T ss_pred ----CCCChH---HHhhhhhHH-HhcccHHHHHHHHHHHHHhC
Confidence 455543 334444444 44799999998888887763
No 48
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=83.48 E-value=12 Score=28.03 Aligned_cols=75 Identities=9% Similarity=0.085 Sum_probs=49.4
Q ss_pred hhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH-HHHHHHHHHHHhCCHHHHHHH
Q 026717 121 ESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGL-ALNFSVFYYEILNSSEKACTM 199 (234)
Q Consensus 121 eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL-~LN~SVF~yEi~~~~~~A~~i 199 (234)
...+..+-..|..|...-+ .+.|...|++|+++++ ..+ .+|...+. ..|.+..++. .|++++|...
T Consensus 63 ~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~ 129 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALH-FGDLAGARQE 129 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHH-hCCHHHHHHH
Confidence 3445555566766655432 3568999999999987 333 34534444 4455555554 8999999999
Q ss_pred HHHHhhhhh
Q 026717 200 AKQEKTLTR 208 (234)
Q Consensus 200 Ak~Afd~a~ 208 (234)
.++|++.+.
T Consensus 130 ~~~al~~~~ 138 (203)
T 3gw4_A 130 YEKSLVYAQ 138 (203)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987653
No 49
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=83.43 E-value=18 Score=30.08 Aligned_cols=182 Identities=15% Similarity=0.062 Sum_probs=91.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccC--CCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchh---
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSST--PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEE--- 82 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~--~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~--- 82 (234)
-+..++.+..+.|+|++++.++++.+.... +.++....=...++.+|. ..+....+...+..........+...
T Consensus 49 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 127 (406)
T 3sf4_A 49 IYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK-VLGNFDEAIVCCQRHLDISRELNDKVGEA 127 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccccchH
Confidence 355788888899999999999988764210 001111112223333332 23444455554432221111111110
Q ss_pred --hHHHHHHHHHH-H--------------------HHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhh
Q 026717 83 --HVSLVKDYRSK-V--------------------ESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAE 139 (234)
Q Consensus 83 --~~~~i~~yr~k-i--------------------~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE 139 (234)
...+..-|... - -++-.......+.+.... .+.......+...|..|...-.
T Consensus 128 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~g~ 202 (406)
T 3sf4_A 128 RALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL-----GDRAAQGRAFGNLGNTHYLLGN 202 (406)
T ss_dssp HHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc-----cCcHHHHHHHHHHHHHHHHccC
Confidence 01111111111 1 233444455555554432 1222333344445665554322
Q ss_pred hcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhh
Q 026717 140 FKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTR 208 (234)
Q Consensus 140 ~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a~ 208 (234)
.+.|...|++|++++... +.++.......|.+..++. .|+.++|+...++|++...
T Consensus 203 ----------~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 203 ----------FRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIF-LGEFETASEYYKKTLLLAR 258 (406)
T ss_dssp ----------HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHH
Confidence 356888999999988642 2233333344455555554 8999999999999887653
No 50
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=83.08 E-value=22 Score=30.76 Aligned_cols=56 Identities=14% Similarity=0.015 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhhcC--CCCC----chhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDL--APTH----PIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--~pt~----pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|+++++.-...+ .|.+ |-......+.+..++. .|+.++|+...++++..
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFL-KNDPLGAHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHH-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHhh
Confidence 5667888888887443333 4444 6666666667766665 79999999999988764
No 51
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=83.06 E-value=19 Score=29.99 Aligned_cols=58 Identities=10% Similarity=0.048 Sum_probs=34.8
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (234)
+.++.++....+.|+|++++.+++++++ . .|. +.+=...+..+|-. .+....+...+.
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~ 123 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAIL-Q--DPG-DAEAWQFLGITQAE-NENEQAAIVALQ 123 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHH-h--CcC-CHHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 3467777888888888888888888776 2 133 34445555555543 344444444443
No 52
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=82.90 E-value=3.8 Score=29.95 Aligned_cols=48 Identities=19% Similarity=0.095 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|.+.|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+..
T Consensus 29 ~~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 29 YPTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIRL 76 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHHh
Confidence 35678888888754 34444 445666666665 78888888888887764
No 53
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=82.10 E-value=4.6 Score=29.36 Aligned_cols=55 Identities=5% Similarity=-0.069 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|.+.|++|+++.. ..++.++.+-....|.+..+.. +|+.++|++.-++|+..
T Consensus 58 ~~~A~~~~~~al~~~~-~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 58 FAECVQFCEKAVEVGR-ETRADYKLIAKAMSRAGNAFQK-QNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCc-ccchhhHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhh
Confidence 3568999999999876 3444555443345556666554 89999999998888754
No 54
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=81.97 E-value=16 Score=30.12 Aligned_cols=71 Identities=14% Similarity=0.023 Sum_probs=45.7
Q ss_pred HHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHHH
Q 026717 124 VFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQ 202 (234)
Q Consensus 124 Vfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~ 202 (234)
+.|+...|.+|... ++ .+.|...|++|+++.. +..++.... +..|.+++|++ +|+.++|+..-++
T Consensus 115 ~~~~~~l~~~~~~~-----~~-----~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~ 180 (293)
T 3u3w_A 115 LQWQYYVAAYVLKK-----VD-----YEYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQ 180 (293)
T ss_dssp HHHHHHHHHHHTTS-----SC-----HHHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcc-----cC-----HHHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 44555566665221 11 3568899999988542 223333333 45566666666 8999999999999
Q ss_pred Hhhhhh
Q 026717 203 EKTLTR 208 (234)
Q Consensus 203 Afd~a~ 208 (234)
|++.+.
T Consensus 181 al~~~~ 186 (293)
T 3u3w_A 181 ILKQLE 186 (293)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 997553
No 55
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=81.71 E-value=5.1 Score=27.47 Aligned_cols=55 Identities=5% Similarity=-0.064 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++.. ..++.++.......+.+..++. .|+.++|....+++++.
T Consensus 54 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 54 YNKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 3568889999998875 3345555556667777777765 89999999999888875
No 56
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=81.64 E-value=16 Score=28.09 Aligned_cols=47 Identities=21% Similarity=0.293 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|....+++++.
T Consensus 176 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 176 DEALSQFAAVTEQ-----DPGHA---DAFYNAGVTYAY-KENREKALEMLDKAIDI 222 (243)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHcc
Confidence 3466667666543 23333 234444444444 68888888887777664
No 57
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=81.26 E-value=18 Score=28.45 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=35.5
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (234)
+-+..++.+..+.|+|++++..+.+++. . +|. +.+=...+..+|-. .+....+...+..
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~-~p~-~~~a~~~lg~~~~~-~g~~~~A~~~~~~ 64 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK--E-NPQ-DPEALYWLARTQLK-LGLVNPALENGKT 64 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--T-SSS-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--h-CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4566777777778888888888888776 2 133 44555555555533 3444455555543
No 58
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=80.91 E-value=13 Score=27.62 Aligned_cols=47 Identities=9% Similarity=0.034 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++++..
T Consensus 62 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 62 EKAAEDAELATVV-----DPKYS---KAWSRLGLARFD-MADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 3455566666543 23332 334455555554 67777777777776655
No 59
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=80.59 E-value=3.7 Score=35.83 Aligned_cols=56 Identities=13% Similarity=0.157 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALT-DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~-~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|.+.|++|+++.+. .....||-.+...-|.+.-|+. +|+.++|...-++|..-
T Consensus 67 ~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~i 123 (472)
T 4g1t_A 67 NEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKHV 123 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHH
Confidence 36789999999999865 3445678777777888888877 89999998887776643
No 60
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=80.57 E-value=17 Score=27.86 Aligned_cols=164 Identities=9% Similarity=0.018 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHH
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLV 87 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 87 (234)
.+..+|...-+.|+|++++.+++++++ . .+-+.+-...+..+|- ..+....+...+....+..... ......+.
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~--~--~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la 98 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIE--E--NKEDAIPYINFANLLS-SVNELERALAFYDKALELDSSA-ATAYYGAG 98 (243)
T ss_dssp -----------------CCTTHHHHHT--T--CTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHH--h--CcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCcc-hHHHHHHH
Confidence 344556666666777777777766665 1 2223444444444443 2344445555544332221111 11111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhh
Q 026717 88 KDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (234)
Q Consensus 88 ~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (234)
.-|.. .--++-......++++- |.. .. .+...|..|... |+ .+.|...|++|+++
T Consensus 99 ~~~~~~~~~~~A~~~~~~~~~~~-----~~~----~~--~~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~--- 154 (243)
T 2q7f_A 99 NVYVVKEMYKEAKDMFEKALRAG-----MEN----GD--LFYMLGTVLVKL-----EQ-----PKLALPYLQRAVEL--- 154 (243)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHT-----CCS----HH--HHHHHHHHHHHT-----SC-----HHHHHHHHHHHHHH---
T ss_pred HHHHHhccHHHHHHHHHHHHHhC-----CCC----HH--HHHHHHHHHHHh-----cc-----HHHHHHHHHHHHHh---
Confidence 11111 11233333444444421 221 12 244456665432 21 35688889998865
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 167 DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 167 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.|.+| ....+.+..++. .|+.++|+...++++...
T Consensus 155 --~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 155 --NENDT---EARFQFGMCLAN-EGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp --CTTCH---HHHHHHHHHHHH-HTCCHHHHHHHHHHHHHC
T ss_pred --CCccH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 23333 244555666665 799999999999988773
No 61
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=80.14 E-value=27 Score=29.80 Aligned_cols=168 Identities=13% Similarity=0.079 Sum_probs=86.6
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHHHH
Q 026717 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (234)
Q Consensus 10 i~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 89 (234)
..+|....+.|+|++++..+.++++ . .+-+..-...+..+|-. .+....+...+....+..... ......+..-
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~-~---~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~ 220 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILE-V---CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKNDN-TEAFYKISTL 220 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH-H---CTTCHHHHHHHHHHHHH-TTCGGGGHHHHHHHHHHHCSC-HHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH-h---CCCChHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 4457778889999999999999987 2 23355556666666643 455566666665443322111 1111122222
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHh--------hhhhhhhhhhhcccchHHHHHHHHHHHHHHH
Q 026717 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKM--------KGDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (234)
Q Consensus 90 yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~Km--------kgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (234)
|.. .--++-......++.+ -|.. ......+..+ .|+.+.- .| -.+.|...|++|
T Consensus 221 ~~~~g~~~~A~~~~~~~~~~-----~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~g-----~~~~A~~~~~~~ 283 (450)
T 2y4t_A 221 YYQLGDHELSLSEVRECLKL-----DQDH--KRCFAHYKQVKKLNKLIESAEELIR-----DG-----RYTDATSKYESV 283 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHHH-----CTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-----HT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh-----CCCh--HHHHHHHHHHHHHHHHHHHHHHHHH-----cC-----CHHHHHHHHHHH
Confidence 211 1112222222333221 2221 1111111011 1222211 11 145678888888
Q ss_pred HHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 161 QDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 161 ~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
++ +.|.+|.... +..+.+..+. -.|+.++|+...++++..
T Consensus 284 l~-----~~p~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 284 MK-----TEPSIAEYTVRSKERICHCFS-KDEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp HH-----HCCSSHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHH
T ss_pred Hh-----cCCcchHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHh
Confidence 76 3466776544 4444454444 589999999999998864
No 62
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=80.13 E-value=20 Score=28.17 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 176 LGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 176 LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
....++.+..++. .|+.++|+...++|+..
T Consensus 215 ~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 244 (275)
T 1xnf_A 215 SETNFYLGKYYLS-LGDLDSATALFKLAVAN 244 (275)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHH-cCCHHHHHHHHHHHHhC
Confidence 4455666666665 79999999999998864
No 63
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=79.51 E-value=6.3 Score=26.58 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+...++|+..
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 5688899999865 44554 345677776665 89999999999998864
No 64
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=79.36 E-value=30 Score=29.89 Aligned_cols=49 Identities=10% Similarity=0.144 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|+++ .|.+| ....+.+..+.. .|+.++|....+++++..
T Consensus 431 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 479 (514)
T 2gw1_A 431 FIEATNLLEKASKL-----DPRSE---QAKIGLAQMKLQ-QEDIDEAITLFEESADLA 479 (514)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHhc
Confidence 45678888888764 34444 334455555554 899999999999988763
No 65
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=78.59 E-value=10 Score=28.30 Aligned_cols=48 Identities=17% Similarity=0.236 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|.+.|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++...
T Consensus 21 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~~ 68 (184)
T 3vtx_A 21 FDGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVVL 68 (184)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHhc
Confidence 35688888888764 45554 333444455554 78888888888877655
No 66
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=78.35 E-value=28 Score=28.93 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++.... .++.. .....|.+.+|.. +|+.++|+...++|+..
T Consensus 132 ~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 132 SKAVHLYQQAAAVFENE---ERLRQAAELIGKASRLLVR-QQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC---CChhHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 44666666666665431 11222 2233444555444 56666666666666554
No 67
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=78.09 E-value=8 Score=32.69 Aligned_cols=56 Identities=9% Similarity=0.008 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|.....+|++..
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHh
Confidence 56888999999988765555567666666777777776 699999999998887654
No 68
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=77.83 E-value=20 Score=26.96 Aligned_cols=59 Identities=10% Similarity=0.034 Sum_probs=38.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (234)
+-+..++.+..+.|+|++++..++++++ . .+. +.+-...++.+|-. .+....+...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~-~--~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 67 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALK-S--DPK-NELAWLVRAEIYQY-LKVNDKAQESFRQ 67 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHH-h--Ccc-chHHHHHHHHHHHH-cCChHHHHHHHHH
Confidence 3456778888899999999999999987 2 133 34445555555543 3455555555543
No 69
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=77.32 E-value=9.4 Score=24.66 Aligned_cols=48 Identities=17% Similarity=0.294 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++ .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 25 ~~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 25 YDEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 35688889988864 34443 345566666665 89999999999988865
No 70
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=77.14 E-value=5.4 Score=30.59 Aligned_cols=49 Identities=10% Similarity=-0.034 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
-+.|..+|++|+.+ .|.||. ...|.++.|.. +|+.++|+..-++|+...
T Consensus 86 ~~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 86 FQQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HHHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 45689999999864 466663 45677777665 899999999999888763
No 71
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.02 E-value=7.5 Score=27.49 Aligned_cols=35 Identities=23% Similarity=0.067 Sum_probs=16.3
Q ss_pred CCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 170 PTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 170 pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (234)
|.+|....+..+.+..++. .|+.++|+...++++.
T Consensus 59 ~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 59 ATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 3443334444444444443 4555555555555443
No 72
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=76.80 E-value=28 Score=28.16 Aligned_cols=168 Identities=13% Similarity=0.111 Sum_probs=89.3
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHHHH
Q 026717 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKD 89 (234)
Q Consensus 10 i~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~ 89 (234)
..+|.+..+.|+|++++..++++++ . .+-+.+-...++.+|-. .+....+...+....+..... ......+..-
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~-~---~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~ 197 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILE-V---CVWDAELRELRAECFIK-EGEPRKAISDLKAASKLKSDN-TEAFYKISTL 197 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH-H---CTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH-h---CCCchHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHH
Confidence 3457888999999999999999997 2 23355556666666544 455566666665443322111 1111112111
Q ss_pred HHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhh--------hhhhhhhhhhcccchHHHHHHHHHHHHHHH
Q 026717 90 YRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMK--------GDYYRYLAEFKVGDERKAAAENTMLSYKAA 160 (234)
Q Consensus 90 yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~Kmk--------gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A 160 (234)
|.. .=.++-......++++ -|. .+....+|.++. |..+. ..| -.+.|...|+++
T Consensus 198 ~~~~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~-----~~~~A~~~~~~~ 260 (359)
T 3ieg_A 198 YYQLGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDG-----RYTDATSKYESV 260 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTT-----CHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcC-----CHHHHHHHHHHH
Confidence 211 1112222223333221 122 222222332221 22221 111 145678888888
Q ss_pred HHHHhhcCCCCCchhH-HHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 161 QDIALTDLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 161 ~~~a~~~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
++. .|.+|... .+..+.+..++. .|+.++|+...+++++.
T Consensus 261 ~~~-----~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 261 MKT-----EPSVAEYTVRSKERICHCFSK-DEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHH-----CCSSHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCchHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 764 34565443 345556666665 89999999999999875
No 73
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=76.77 E-value=26 Score=27.81 Aligned_cols=183 Identities=13% Similarity=0.104 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhccC----CCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhh-hc--ccch
Q 026717 9 YVYLAKLAEQAERYEEMVKFMDSLVTSST----PATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKE-EG--RKNE 81 (234)
Q Consensus 9 li~~Aklaeq~eRy~Dm~~~mk~~~~~~~----~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~-~~--~~~~ 81 (234)
+..++.+....|+|++++.++++.+.... .+.+....-...++..|-. .+....+...+....+.. .. ...+
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~ 150 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDHP 150 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 45788888899999999999999886210 0112222233334444322 344444555544322211 00 0011
Q ss_pred hhH----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHH
Q 026717 82 EHV----SLVKDYR-SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLS 156 (234)
Q Consensus 82 ~~~----~~i~~yr-~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~a 156 (234)
... .+..-|. ..=-++-.......+++.....-+ +....+..+...|..|...-. .+.|...
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~----------~~~A~~~ 217 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGP---DDPNVAKTKNNLASCYLKQGK----------FKQAETL 217 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCT---TCHHHHHHHHHHHHHHHHHTC----------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHHHHcCC----------HHHHHHH
Confidence 100 1111111 111233344444555554433211 122233334444555433321 3567888
Q ss_pred HHHHHHHHhh-----------------------------------------cCCCCCchhHHHHHHHHHHHHHHhCCHHH
Q 026717 157 YKAAQDIALT-----------------------------------------DLAPTHPIRLGLALNFSVFYYEILNSSEK 195 (234)
Q Consensus 157 Y~~A~~~a~~-----------------------------------------~L~pt~pirLgL~LN~SVF~yEi~~~~~~ 195 (234)
|++|++++.. .....+|.......+.+..|.. .|+.++
T Consensus 218 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~ 296 (311)
T 3nf1_A 218 YKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRR-QGKFEA 296 (311)
T ss_dssp HHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHH-HTCHHH
T ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHH-CCCHHH
Confidence 8888876532 1122566666667777777666 799999
Q ss_pred HHHHHHHHhhh
Q 026717 196 ACTMAKQEKTL 206 (234)
Q Consensus 196 A~~iAk~Afd~ 206 (234)
|....++|++.
T Consensus 297 A~~~~~~al~l 307 (311)
T 3nf1_A 297 AETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 74
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=76.28 E-value=17 Score=25.41 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLTRPL 210 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a~~l 210 (234)
-+.|...|++|++++... . .+|.......+.+..++. .|+.++|+...++|++.+..+
T Consensus 105 ~~~A~~~~~~a~~~~~~~-~-~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~~ 162 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQEL-K-DRIGEGRACWSLGNAYTA-LGNHDQAMHFAEKHLEISREV 162 (164)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHc-c-chHhHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHHHh
Confidence 456889999999988642 2 234444455556665555 799999999999998766543
No 75
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=76.01 E-value=29 Score=27.86 Aligned_cols=56 Identities=13% Similarity=-0.060 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-chhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTH-PIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~-pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++....-.+.+ |-......+.+..++. .|+.++|+...+++++.
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 45688999999998764333222 3333455566666655 89999999999998875
No 76
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=75.84 E-value=13 Score=25.72 Aligned_cols=50 Identities=18% Similarity=0.148 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++++. +.|.+|......++.+..++. +|+.++|+..-++++..
T Consensus 56 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 56 QLAEAQFRDLVS-----RYPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 567888888875 356777666666777777765 89999999999988865
No 77
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=75.83 E-value=27 Score=27.40 Aligned_cols=142 Identities=15% Similarity=0.155 Sum_probs=78.4
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHH
Q 026717 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVS 85 (234)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~ 85 (234)
-+-+..++.+..+.|++++++..++++++ . +|. +.+=...++.+|...- +. .+. ..
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~-~--~P~-~~~a~~~lg~~~~~~~-------~~----------~~~---~~ 94 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA-R--TPR-YLGGYMVLSEAYVALY-------RQ----------AED---RE 94 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHHHH-------HT----------CSS---HH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--CCC-cHHHHHHHHHHHHHhh-------hh----------hhh---hc
Confidence 34567789999999999999999999997 2 244 4455555565554320 00 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHh
Q 026717 86 LVKDYRSKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIAL 165 (234)
Q Consensus 86 ~i~~yr~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~ 165 (234)
....=-++-......++++ -|.. .. .+-..|..|...-. .+.|...|++|+++.
T Consensus 95 ----~~~g~~~~A~~~~~~al~~-----~P~~----~~--~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~- 148 (217)
T 2pl2_A 95 ----RGKGYLEQALSVLKDAERV-----NPRY----AP--LHLQRGLVYALLGE----------RDKAEASLKQALALE- 148 (217)
T ss_dssp ----HHHHHHHHHHHHHHHHHHH-----CTTC----HH--HHHHHHHHHHHTTC----------HHHHHHHHHHHHHHC-
T ss_pred ----ccccCHHHHHHHHHHHHHh-----Cccc----HH--HHHHHHHHHHHcCC----------hHHHHHHHHHHHhcc-
Confidence 0000001111122222221 2321 11 23344555433221 356889999998764
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 166 TDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 166 ~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+| ....|.+..+.. +|+.++|+...++++..
T Consensus 149 -----~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 149 -----DTP---EIRSALAELYLS-MGRLDEALAQYAKALEQ 180 (217)
T ss_dssp -----CCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred -----cch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 222 233566666655 79999999999988875
No 78
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=75.45 E-value=9.6 Score=26.72 Aligned_cols=48 Identities=13% Similarity=0.165 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|...|++|+++ .|.+ .....|.+..++. +|+.++|+...++++..
T Consensus 43 ~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 43 YRKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688888888764 4455 3456677777776 79999999999999876
No 79
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=74.60 E-value=11 Score=24.93 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.++ ....+.+..++. .|+.++|+...++++..
T Consensus 23 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEES---KYWLMKGKALYN-LERYEEAVDCYNYVINV 69 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcCCH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4678888888764 23333 345666776666 79999999988888764
No 80
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=74.29 E-value=16 Score=28.03 Aligned_cols=88 Identities=20% Similarity=0.098 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHHh-hccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh--hh--hhhhcccchhhHHHHHHHHHHH
Q 026717 20 ERYEEMVKFMDSLV-TSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS--IE--QKEEGRKNEEHVSLVKDYRSKV 94 (234)
Q Consensus 20 eRy~Dm~~~mk~~~-~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~--ie--qk~~~~~~~~~~~~i~~yr~ki 94 (234)
+|.|..++.+|.-+ .+.+ |++||.|-|.=|.--.|...-.-|-|+|-+.. .. .+.+..+ .+-++-..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~ 84 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRT-GGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQA 84 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCC-SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhH
Confidence 57788888887654 3234 69999999999988888888777888877742 11 1111111 0113334445
Q ss_pred HHHHHHHHHHHHHHhhhcc
Q 026717 95 ESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 95 ~~EL~~~C~eil~lId~~L 113 (234)
+++|..+.+..+.-||..|
T Consensus 85 e~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 85 LWEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5555555555555555544
No 81
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=74.22 E-value=35 Score=28.05 Aligned_cols=54 Identities=7% Similarity=-0.088 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhH-HHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|+++.... .++... ....|.+.++.. +|+.++|+...+++.+..
T Consensus 134 ~~~A~~~~~~Al~~~~~~---~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 134 YAKAIDCYELAGEWYAQD---QSVALSNKCFIKCADLKAL-DGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhC---CChHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHH
Confidence 467899999999987532 123232 345667777776 799999999998887653
No 82
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=74.19 E-value=10 Score=26.13 Aligned_cols=49 Identities=12% Similarity=0.167 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
-+.|...|++|+++ .|.+|. ...+.+..|+. +|+.++|+...++|++..
T Consensus 23 ~~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 23 ASRALALFEELVET-----DPDYVG---TYYHLGKLYER-LDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhhh
Confidence 35678888888864 344443 45566666655 899999999999998764
No 83
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=73.46 E-value=50 Score=29.42 Aligned_cols=54 Identities=13% Similarity=0.055 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|.+.|++++++... . +.+|-. .....+.+..++ ..|+.++|+...+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYR-KLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHh
Confidence 46788999999887653 2 345554 333444444444 589999999999998865
No 84
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=72.60 E-value=14 Score=24.54 Aligned_cols=48 Identities=17% Similarity=0.109 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++|+..
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHhc
Confidence 4678888888753 4555431 45666777666 79999999999988865
No 85
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=72.46 E-value=35 Score=27.14 Aligned_cols=185 Identities=11% Similarity=0.064 Sum_probs=94.7
Q ss_pred cHHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccc--hh
Q 026717 5 TREQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN--EE 82 (234)
Q Consensus 5 ~re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~--~~ 82 (234)
+-+.+..+|...-+.|+|++++..+++++. ..++.++..+=...+..+|-. .+....|...+....+....... ..
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~-~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFT-YGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGG-GCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-hCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 456788999999999999999999999997 211122235555666666643 46666677776654433211101 01
Q ss_pred hHHHHHHHH---------HHHHHHHHHHHHHHHHHhhhccCCCCCCc-hhHHHHHHhhhhh---hhhhhhh--cccchHH
Q 026717 83 HVSLVKDYR---------SKVESELSDVCGSILKLLDSHLVPSATAG-ESKVFYLKMKGDY---YRYLAEF--KVGDERK 147 (234)
Q Consensus 83 ~~~~i~~yr---------~ki~~EL~~~C~eil~lId~~Lip~~~~~-eskVfy~KmkgDy---yRYlaE~--~~~~~~~ 147 (234)
...+..-|. ..--++-....+.+++. -|..... ........+.+++ +-.++.+ ..|+
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~--- 163 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYERREL--- 163 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---
Confidence 111111111 11122222333333221 2433221 1111111111110 0111111 1111
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHH---------hCCHHHHHHHHHHHhhh
Q 026717 148 AAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEI---------LNSSEKACTMAKQEKTL 206 (234)
Q Consensus 148 ~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi---------~~~~~~A~~iAk~Afd~ 206 (234)
-+.|...|+++++ ..|.+|.......+.+.-|+.. .|+.++|+...++++..
T Consensus 164 --~~~A~~~~~~~l~-----~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 164 --YEAAAVTYEAVFD-----AYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp --HHHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHH-----HCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH
Confidence 3567888888875 3456676655566666666542 28889999998888765
No 86
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=71.58 E-value=15 Score=25.31 Aligned_cols=49 Identities=12% Similarity=-0.030 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|+.+ .|.++ ....+.+..+.. .|+.++|+...++|+...
T Consensus 35 ~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 35 FDAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhc
Confidence 35688889988864 34443 334566666665 899999999999888753
No 87
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=71.10 E-value=42 Score=27.57 Aligned_cols=27 Identities=7% Similarity=-0.124 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
-+-..+.+....|+|++++++..+.++
T Consensus 39 ~~~~a~~~~~~~g~~~~A~~~~~~al~ 65 (292)
T 1qqe_A 39 LCVQAATIYRLRKELNLAGDSFLKAAD 65 (292)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 355667788889999999999988886
No 88
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=70.92 E-value=26 Score=37.69 Aligned_cols=25 Identities=20% Similarity=0.106 Sum_probs=20.8
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 181 NFSVFYYEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 181 N~SVF~yEi~~~~~~A~~iAk~Afd 205 (234)
.-.|-+|+-.|..++|+.+..+|+.
T Consensus 1284 eeli~yYe~~G~feEAI~LlE~aL~ 1308 (1630)
T 1xi4_A 1284 EELINYYQDRGYFEELITMLEAALG 1308 (1630)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 3557788999999999999999843
No 89
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=70.61 E-value=11 Score=26.27 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...+++++.
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHH
Confidence 456777777764 356788666666677777776 79999999999988865
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=70.58 E-value=20 Score=25.64 Aligned_cols=47 Identities=6% Similarity=-0.154 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 4567777777654 34443 344566666555 79999999998888865
No 91
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=69.90 E-value=46 Score=27.54 Aligned_cols=51 Identities=8% Similarity=-0.058 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLG-LALNFSVFYYEILNSSEKACTMAKQEK 204 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLg-L~LN~SVF~yEi~~~~~~A~~iAk~Af 204 (234)
-+.|...|++|+++.... +. +| ..+ ..++. ...|-.+|+.++|+...+++.
T Consensus 171 ~~~A~~~~~~al~~~~~~-~~-~~-~~~~~~~~~-g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 171 FDEAAASLQKEKSMYKEM-EN-YP-TCYKKCIAQ-VLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-HH-HHHHHHHHH-HHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc-CC-hh-HHHHHHHHH-HHHHHHcCCHHHHHHHHHHHh
Confidence 456899999999988642 21 22 333 33444 344445899999999988877
No 92
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=69.83 E-value=16 Score=28.97 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhH-----HHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRL-----GLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirL-----gL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|..+|++|+++.-. .|+..++.+ ....|-+.-+.. +|+.++|+.-+.+|+..
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 46689999999998753 222223333 377777777666 89999999999998864
No 93
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=69.81 E-value=41 Score=26.88 Aligned_cols=60 Identities=12% Similarity=-0.010 Sum_probs=42.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~i 71 (234)
+.++.+|...-+.|+|++++.+++++++ . .|. +.+-...+..+|-. .+....+...+...
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~-~--~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~~a 81 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQ-A--APE-REEAWRSLGLTQAE-NEKDGLAIIALNHA 81 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH-h--CCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 4578899999999999999999999987 2 244 45555566666544 35555666666543
No 94
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=69.68 E-value=16 Score=25.58 Aligned_cols=46 Identities=17% Similarity=0.065 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (234)
+.|...|++|+++ .|.+| .+..|.+..++. +|+.++|+...++|+.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 3455555555543 23332 333344444443 5666666665555554
No 95
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=69.56 E-value=46 Score=27.35 Aligned_cols=58 Identities=12% Similarity=0.003 Sum_probs=40.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (234)
+.+..++....+.|+|++++.+++++++ . .|. +.+=...+..+|-. .+....+...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~--~-~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQ--Q-DPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHH--S-CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH--h-CCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 4578899999999999999999999997 2 243 45555566666543 344445555544
No 96
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=68.90 E-value=10 Score=26.63 Aligned_cols=49 Identities=12% Similarity=0.000 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.|...|++|++ +.+.+|-......|.+..|+. +|+.++|+...++|+..
T Consensus 8 ~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 8 QAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp CCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 46778888875 334577777788888888886 89999999999999876
No 97
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=68.73 E-value=16 Score=26.41 Aligned_cols=48 Identities=4% Similarity=-0.051 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|.+.|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+..
T Consensus 63 ~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~l 110 (126)
T 4gco_A 63 FQRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 35688889999864 45554 345566666665 89999999999998864
No 98
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=68.63 E-value=43 Score=26.72 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=39.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSI 71 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~i 71 (234)
.-+..++.+..+.|+|++++.+++++++ . .|. +.+-...++.+|- ..+....+.+.+...
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~--~~~-~~~~~~~la~~~~-~~~~~~~A~~~~~~~ 115 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARM-L--DPK-DIAVHAALAVSHT-NEHNANAALASLRAW 115 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh-c--CcC-CHHHHHHHHHHHH-HcCCHHHHHHHHHHH
Confidence 4556788889999999999999999987 2 133 3444555555553 344555566655443
No 99
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=68.38 E-value=18 Score=24.76 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 5678888888764 33443 345566666655 89999999999998865
No 100
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=68.05 E-value=28 Score=24.31 Aligned_cols=54 Identities=17% Similarity=0.028 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
..|..-|++|++.....-. ..+.+-.+..++++-+|. +|+.++|+...++|+..
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhc
Confidence 4577888888877643211 123344555666666665 89999999999999865
No 101
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=67.81 E-value=41 Score=26.19 Aligned_cols=48 Identities=13% Similarity=0.002 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...+++++.
T Consensus 93 ~~~A~~~~~~al~~-----~~~~~---~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 93 FDAAYEAFDSVLEL-----DPTYN---YAHLNRGIALYY-GGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHHHHH-----CTTCT---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----Ccccc---HHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 34577777777654 34443 233444455554 78888888888888765
No 102
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=67.22 E-value=20 Score=24.26 Aligned_cols=49 Identities=16% Similarity=0.324 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|++. .|.+| ....+.+..++. .|+.++|+...+++++..
T Consensus 20 ~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~ 68 (131)
T 1elr_A 20 FDTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVG 68 (131)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhc
Confidence 35678888888765 24443 345566666665 799999999999988764
No 103
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=66.93 E-value=19 Score=25.15 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=8.1
Q ss_pred hCCHHHHHHHHHHHhhh
Q 026717 190 LNSSEKACTMAKQEKTL 206 (234)
Q Consensus 190 ~~~~~~A~~iAk~Afd~ 206 (234)
+|+.++|+...++|+..
T Consensus 90 ~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 90 MESYDEAIANLQRAYSL 106 (137)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHH
Confidence 45555555444444443
No 104
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=65.74 E-value=22 Score=23.54 Aligned_cols=47 Identities=13% Similarity=-0.077 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|....+++.+.
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALEF-LNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHc
Confidence 4577888888764 34444 345666666554 89999999999988764
No 105
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=65.60 E-value=21 Score=24.84 Aligned_cols=48 Identities=8% Similarity=0.036 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
+.|...|++|+++ .|.+| ....+.+..++. +|+.++|+...++++...
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 5688889988865 34553 345566666665 899999999999888654
No 106
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=65.31 E-value=19 Score=29.62 Aligned_cols=180 Identities=13% Similarity=0.046 Sum_probs=88.7
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH-----HhhhhhhhhHHHHHHh-hhhhhhcccc
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAY-----KNVIGSLRAAWRIISS-IEQKEEGRKN 80 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvay-----Kn~i~~~R~s~R~l~~-ieqk~~~~~~ 80 (234)
+.+...+...-..|+|+++++.+++.++ . .+. ..+....+..-+ -...+..-.|...+.. ++........
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 151 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELK--K-EEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--T-CCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhc--c-ccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch
Confidence 3455677777788999999999998887 2 133 333322221111 1111233344444432 2111111101
Q ss_pred hhhH----HHHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHH
Q 026717 81 EEHV----SLVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTML 155 (234)
Q Consensus 81 ~~~~----~~i~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~ 155 (234)
.... .+..-|.. .=-++-....+..+++.+.. |. +....+..+-..|..|..+-+ -+.|..
T Consensus 152 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~--~~~~~~~~~~nlg~~y~~~~~----------y~~Al~ 217 (293)
T 2qfc_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL--HD--NEEFDVKVRYNHAKALYLDSR----------YEESLY 217 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CC--CHHHHHHHHHHHHHHHHHTTC----------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--Cc--cccchHHHHHhHHHHHHHHhh----------HHHHHH
Confidence 0001 11111211 11234445555666555432 22 112121233344555543221 467899
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHH-HHHHHHHhhhh
Q 026717 156 SYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKA-CTMAKQEKTLT 207 (234)
Q Consensus 156 aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A-~~iAk~Afd~a 207 (234)
.|++|++++.. ..++..++.+++.--..|.-+|+.++| ....++|+.-+
T Consensus 218 ~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 218 QVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 99999999853 233444555544444444558999999 56577777655
No 107
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=64.35 E-value=8.8 Score=33.78 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhhc--------CCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTD--------LAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~--------L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|...|++|+++.... ....+|....+.+|.+..|+. +++.++|+...++|++.
T Consensus 239 ~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 239 WEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHh
Confidence 356788888888865431 111567777888888888876 79999999999888865
No 108
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=64.06 E-value=40 Score=24.65 Aligned_cols=47 Identities=6% Similarity=-0.195 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.+| ...++.+..|+. +|+.++|+...++|+..
T Consensus 80 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~~~~~-~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 80 HEAEETSSEVLKR-----EETNE---KALFRRAKARIA-AWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCcch---HHHHHHHHHHHH-HhcHHHHHHHHHHHHhc
Confidence 4677888888765 45554 344555666665 89999999999988865
No 109
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=63.92 E-value=37 Score=24.29 Aligned_cols=163 Identities=16% Similarity=0.151 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHH
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLV 87 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i 87 (234)
-+..++....+.|+|++++..+++++. . .+. +..-...++.+|- ..+....+...+....+..... ........
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~--~-~~~-~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a 83 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYD--A-DAF-DVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDN-VKVATVLG 83 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCC--T-TSC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHH--h-Ccc-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCC-HHHHHHHH
Confidence 345678888889999999999998886 2 133 3444444444443 2344555555554333221110 11111111
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhh
Q 026717 88 KDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (234)
Q Consensus 88 ~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (234)
.-|.. .=-++-....+.++.+ -|. ...+ +...|..|.-. |+ .+.|...|+++++..
T Consensus 84 ~~~~~~~~~~~A~~~~~~~~~~-----~~~----~~~~--~~~~a~~~~~~-----~~-----~~~A~~~~~~~~~~~-- 140 (186)
T 3as5_A 84 LTYVQVQKYDLAVPLLIKVAEA-----NPI----NFNV--RFRLGVALDNL-----GR-----FDEAIDSFKIALGLR-- 140 (186)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH-----CTT----CHHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHC--
T ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CcH----hHHH--HHHHHHHHHHc-----Cc-----HHHHHHHHHHHHhcC--
Confidence 11111 1112222233333322 121 1112 22334433221 11 356788888887642
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 167 DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 167 ~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
|.+| ....+.+..++. .|+.++|....+++++.
T Consensus 141 ---~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 141 ---PNEG---KVHRAIAFSYEQ-MGRHEEALPHFKKANEL 173 (186)
T ss_dssp ---TTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred ---ccch---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence 3443 344555555554 79999999999988764
No 110
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=63.63 E-value=26 Score=23.57 Aligned_cols=17 Identities=29% Similarity=0.278 Sum_probs=9.6
Q ss_pred hCCHHHHHHHHHHHhhh
Q 026717 190 LNSSEKACTMAKQEKTL 206 (234)
Q Consensus 190 ~~~~~~A~~iAk~Afd~ 206 (234)
.|+.++|+...++++..
T Consensus 93 ~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 93 LNKHVEAVAYYKKALEL 109 (131)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhc
Confidence 56666666655555543
No 111
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=62.59 E-value=29 Score=22.87 Aligned_cols=48 Identities=21% Similarity=0.214 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+.. .|.+| ....+.+..++. .|+.++|+...+++++.
T Consensus 20 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 20 IDDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 35678888888764 34443 344555666555 79999999999998875
No 112
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=62.58 E-value=28 Score=23.40 Aligned_cols=9 Identities=11% Similarity=0.065 Sum_probs=3.9
Q ss_pred HHHHHHHHH
Q 026717 153 TMLSYKAAQ 161 (234)
Q Consensus 153 a~~aY~~A~ 161 (234)
|.+.|++|+
T Consensus 65 A~~~~~~~~ 73 (131)
T 2vyi_A 65 AVQDCERAI 73 (131)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
No 113
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=61.65 E-value=22 Score=26.37 Aligned_cols=47 Identities=11% Similarity=0.053 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++|+..
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5688999999864 466663 34667777766 89999999999888764
No 114
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=61.17 E-value=53 Score=25.10 Aligned_cols=56 Identities=11% Similarity=0.048 Sum_probs=35.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l 68 (234)
+.+..++...-+.|+|++++.++.++++ . + -+.+=...++.+|-. .+....+...+
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~-~--~--~~~~~~~~~~~~~~~-~~~~~~A~~~~ 61 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWE-L--H--KDITYLNNRAAAEYE-KGEYETAISTL 61 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--S--CCTHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHH-h--h--ccHHHHHHHHHHHHH-cccHHHHHHHH
Confidence 5667788888889999999999988886 2 2 233444445554433 23334444444
No 115
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=60.95 E-value=26 Score=26.68 Aligned_cols=50 Identities=22% Similarity=0.293 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-------------hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHP-------------IRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p-------------irLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+...++|+..
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 45788888887643 3333 123566677777765 79999999999888765
No 116
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=60.80 E-value=54 Score=25.06 Aligned_cols=49 Identities=8% Similarity=0.020 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|+++ .|.+| ....+.+..++. +|+.++|....++|++..
T Consensus 189 ~~~A~~~~~~al~~-----~~~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 189 FPEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CHHHH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHhC
Confidence 35678888888764 34443 344555555555 799999999999988764
No 117
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=60.80 E-value=27 Score=24.90 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
.+..+|....+.|+|++++..+++++.
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~ 41 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIE 41 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 345566666777777777777777665
No 118
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=59.68 E-value=21 Score=20.41 Aligned_cols=26 Identities=23% Similarity=0.461 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 026717 85 SLVKDYRSKVESELSDVCGSILKLLD 110 (234)
Q Consensus 85 ~~i~~yr~ki~~EL~~~C~eil~lId 110 (234)
+.++.||.+|.+.|..+.+.|-.++.
T Consensus 4 krlrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45688999999999999998877764
No 119
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=59.56 E-value=28 Score=25.67 Aligned_cols=47 Identities=11% Similarity=0.084 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|.+.|++|+++ .|.||- ...+.+..|+. +|+.++|+..-++|++.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDPK---AHRFLGLLYEL-EENTDKAVECYRRSVEL 94 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCchHHHHHHHHHHHHh
Confidence 5678888888764 455542 33445555554 78999999888888765
No 120
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=59.35 E-value=35 Score=22.63 Aligned_cols=16 Identities=6% Similarity=0.021 Sum_probs=7.5
Q ss_pred hCCHHHHHHHHHHHhh
Q 026717 190 LNSSEKACTMAKQEKT 205 (234)
Q Consensus 190 ~~~~~~A~~iAk~Afd 205 (234)
.|+.++|....+++++
T Consensus 90 ~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 90 QGDYDEAIEYYQKALE 105 (125)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHH
Confidence 4455555444444443
No 121
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=59.28 E-value=32 Score=23.89 Aligned_cols=11 Identities=9% Similarity=0.259 Sum_probs=6.1
Q ss_pred HHHHHHHHHHH
Q 026717 152 NTMLSYKAAQD 162 (234)
Q Consensus 152 ~a~~aY~~A~~ 162 (234)
.|...|++|+.
T Consensus 61 ~A~~~~~~al~ 71 (137)
T 3q49_B 61 QALADCRRALE 71 (137)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555666654
No 122
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.01 E-value=31 Score=24.07 Aligned_cols=48 Identities=10% Similarity=-0.063 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 81 ~~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 81 YDKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHc
Confidence 35678888888765 34443 344566666655 79999999999988865
No 123
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=58.08 E-value=38 Score=22.44 Aligned_cols=9 Identities=22% Similarity=0.608 Sum_probs=3.2
Q ss_pred hCCHHHHHH
Q 026717 19 AERYEEMVK 27 (234)
Q Consensus 19 ~eRy~Dm~~ 27 (234)
.|+|++++.
T Consensus 22 ~~~~~~A~~ 30 (125)
T 1na0_A 22 QGDYDEAIE 30 (125)
T ss_dssp TTCHHHHHH
T ss_pred cCCHHHHHH
Confidence 333333333
No 124
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=57.55 E-value=29 Score=24.98 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|...|++|+.+ .|.+|. ..+|.+..++. +|+.++|+...++++..
T Consensus 68 ~~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 68 YEQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35688899998864 466664 34566666665 89999999999988765
No 125
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=56.26 E-value=34 Score=25.27 Aligned_cols=47 Identities=9% Similarity=-0.015 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+.+ .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHhh
Confidence 5678888888764 34554 445666776666 79999999999998876
No 126
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=56.09 E-value=59 Score=24.03 Aligned_cols=79 Identities=6% Similarity=-0.099 Sum_probs=52.3
Q ss_pred hHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 026717 122 SKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAK 201 (234)
Q Consensus 122 skVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk 201 (234)
..+..+-..|..|...-+ .+.|...|++|+.++.. . .+|...+.++..-...|.-.|+.++|....+
T Consensus 105 ~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 105 AASANAYEVATVALHFGD----------LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHHHHHHTC----------HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 444555556665554422 45689999999998863 2 3455555555444444445899999999999
Q ss_pred HHhhhhhhhhcc
Q 026717 202 QEKTLTRPLRRP 213 (234)
Q Consensus 202 ~Afd~a~~l~dn 213 (234)
+|++.+..+.+.
T Consensus 172 ~al~~~~~~~~~ 183 (203)
T 3gw4_A 172 RARDIFAELEDS 183 (203)
T ss_dssp HHHHHHHHTTCH
T ss_pred HHHHHHHHcCCH
Confidence 999987655543
No 127
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=55.45 E-value=13 Score=31.91 Aligned_cols=55 Identities=18% Similarity=0.241 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcC-------CCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDL-------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L-------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+..
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 457777777776532110 00124455666777776665 67777777777777654
No 128
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=55.31 E-value=25 Score=29.38 Aligned_cols=69 Identities=17% Similarity=0.115 Sum_probs=45.4
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhh----hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026717 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~L 113 (234)
|+||.|-|.=|....|...-.-|.|+|-+..--. +.+..+ .+-++-.++.++|+..+.++.+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999998888888888742111 111111 11134445666777777777777777654
No 129
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=55.19 E-value=34 Score=25.83 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++|++.
T Consensus 53 ~~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 53 MTEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHHh
Confidence 35688899998865 24443 455667777666 89999999999999873
No 130
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=54.82 E-value=18 Score=24.69 Aligned_cols=47 Identities=21% Similarity=0.152 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+. +.|.+ .....+.+..++. .|+.++|+...++++..
T Consensus 33 ~~A~~~~~~al~-----~~~~~---~~~~~~la~~~~~-~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 33 PQAMKHYTEAIK-----RNPKD---AKLYSNRAACYTK-LLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHT-----TCTTC---HHHHHHHHHHHTT-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCCc---HHHHHHHHHHHHH-hccHHHHHHHHHHHHHh
Confidence 457788888864 34444 3445566666655 79999999999998875
No 131
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=54.55 E-value=1.6e+02 Score=28.51 Aligned_cols=57 Identities=11% Similarity=0.169 Sum_probs=38.2
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRII 68 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l 68 (234)
+-+..++.+..+.|+|++++.+.++.+++ +|+. .+=.+-|..+|.. .+..-.|...+
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l---~P~~-~~a~~nLg~~l~~-~g~~~~A~~~~ 100 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRI---SPTF-ADAYSNMGNTLKE-MQDVQGALQCY 100 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CTTC-HHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCC-HHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 45667899999999999999999999982 2553 4445555666544 23333444433
No 132
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=54.42 E-value=36 Score=25.84 Aligned_cols=47 Identities=11% Similarity=-0.011 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.++ ...++.+..|+. +|+.++|+...++|+..
T Consensus 105 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 105 PKAIDHASKVLKI-----DKNNV---KALYKLGVANMY-FGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-cccHHHHHHHHHHHHHH
Confidence 5678888888865 34443 445666666665 89999999999998865
No 133
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=54.02 E-value=25 Score=31.59 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhhcCC--------CCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLA--------PTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~--------pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|...|++|+++.... + ..+|.+..+.+|.+..|+. +++.++|+...++|+..
T Consensus 284 ~~~A~~~y~~Al~~~p~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 284 YMQAVIQYGKIVSWLEME-YGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHHTTC-CSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccc-ccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhc
Confidence 356888999998765321 1 0245677888899888887 89999999999988875
No 134
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=53.13 E-value=31 Score=27.24 Aligned_cols=55 Identities=11% Similarity=0.009 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhh--cCCCCCchhH-HHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALT--DLAPTHPIRL-GLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~--~L~pt~pirL-gL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|..+|.+|+++-.. ++.|.++--+ .-..|-++-+.. +|+.++|+.--++|+..
T Consensus 74 ~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~-lgr~eEAl~~y~kAlel 131 (159)
T 2hr2_A 74 DEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDG-LGRGAEAMPEFKKVVEM 131 (159)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHH-CCCHHHHHHHHHHHHhc
Confidence 4578888888886322 4566654211 111344444444 89999999999888876
No 135
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=52.97 E-value=96 Score=28.86 Aligned_cols=48 Identities=21% Similarity=0.310 Sum_probs=30.6
Q ss_pred hhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHH------HHHHHH
Q 026717 129 MKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNF------SVFYYE 188 (234)
Q Consensus 129 mkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~------SVF~yE 188 (234)
--||..||.... ..|...|++|..+.=.+= ..--.||+.-.+ +||||-
T Consensus 157 ~LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G--~~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 157 HLGDIARYRNQT----------SQAESYYRHAAQLVPSNG--QPYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHHTTCH----------HHHHHHHHHHHHHCTTBS--HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HcccHHHHHHHH----------HHHHHHHHHHHHhCCCCC--chHHHHHHHHhcccccHHHHHHHH
Confidence 379999999763 578999999986531111 112456655544 566664
No 136
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=52.91 E-value=38 Score=26.29 Aligned_cols=29 Identities=10% Similarity=0.174 Sum_probs=26.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
-+.++..+...-+.|+|++++..+.+++.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA 32 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 46788899999999999999999999987
No 137
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=52.75 E-value=30 Score=28.59 Aligned_cols=47 Identities=13% Similarity=0.047 Sum_probs=26.0
Q ss_pred HHHHHHHHHhh--cCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 156 SYKAAQDIALT--DLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 156 aY~~A~~~a~~--~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-|++|....++ .+.|.++ ....+.+..|+. +|+.++|+...++|+..
T Consensus 53 ~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 53 QPEQALADCRRALELDGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSL 101 (281)
T ss_dssp CHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 34555555443 3344443 344455555444 67777777777777665
No 138
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=52.64 E-value=50 Score=26.02 Aligned_cols=74 Identities=18% Similarity=0.155 Sum_probs=47.2
Q ss_pred HhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHHHHHH----HHHhCCHHHHHHHH
Q 026717 128 KMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNFSVFY----YEILNSSEKACTMA 200 (234)
Q Consensus 128 KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgL~LN~SVF~----yEi~~~~~~A~~iA 200 (234)
...|.-+.=+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|++.-
T Consensus 40 ~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~ 114 (158)
T 1zu2_A 40 TRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFF 114 (158)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHH
Confidence 334555555666777777777889999999999864 45555 3455554321111 11235788888888
Q ss_pred HHHhhh
Q 026717 201 KQEKTL 206 (234)
Q Consensus 201 k~Afd~ 206 (234)
++|++.
T Consensus 115 ~kAl~l 120 (158)
T 1zu2_A 115 QQAVDE 120 (158)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887765
No 139
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=52.52 E-value=45 Score=23.84 Aligned_cols=47 Identities=13% Similarity=0.083 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|.+.|+++... .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 93 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 93 DLAVPLLIKVAEA-----NPINF---NVRFRLGVALDN-LGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CcHhH---HHHHHHHHHHHH-cCcHHHHHHHHHHHHhc
Confidence 4677888888764 33443 344555655555 89999999999998876
No 140
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=51.81 E-value=82 Score=24.46 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=42.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ 73 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieq 73 (234)
+.+..+|...-+.|+|++++..+++++... ++.+...+-...+..+|-. .+....|...+..+.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~ 69 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIR 69 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHH
Confidence 456778889999999999999999999721 1123344555555666533 4556666666655443
No 141
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=51.24 E-value=31 Score=31.25 Aligned_cols=28 Identities=7% Similarity=-0.187 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 178 LALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 178 L~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
...|.+..|+. +|+.++|+...++|+..
T Consensus 76 ~~~~lg~~~~~-~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 76 GYYRRAASNMA-LGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 34445554444 57777777776666654
No 142
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=50.15 E-value=85 Score=24.12 Aligned_cols=62 Identities=8% Similarity=-0.052 Sum_probs=41.7
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhh
Q 026717 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIE 72 (234)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ie 72 (234)
.+-+..+|.+..+.|+|++++++++++++ . ++. +..-...++.+|-. .+....+.+.+....
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~-~--~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALA-S--DSR-NARVLNNYGGFLYE-QKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-H--CcC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHHH
Confidence 34566788999999999999999999987 2 243 44445555555543 455566666665443
No 143
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=49.94 E-value=28 Score=24.77 Aligned_cols=47 Identities=9% Similarity=0.042 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (234)
.+.|..+|++|+++ .|.+|- ...+.++.+.. .|+.++|+...++++.
T Consensus 67 ~~~A~~~~~~al~l-----~P~~~~---~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 67 DGLAIIALNHARML-----DPKDIA---VHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35688899998764 455553 44566666655 7999999999888874
No 144
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=49.85 E-value=49 Score=24.98 Aligned_cols=48 Identities=8% Similarity=0.007 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
-+.|...|++|+.+ .|.||- ...|.++.|+. +|+.++|+..-++|+..
T Consensus 52 ~~eA~~~~~~al~~-----~P~~~~---~~~~lg~~~~~-~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 52 IEEAEVFFRFLCIY-----DFYNVD---YIMGLAAIYQI-KEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHH-HccHHHHHHHHHHHHhh
Confidence 35688888888753 566654 34566666665 89999999999988765
No 145
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=48.70 E-value=42 Score=27.39 Aligned_cols=69 Identities=17% Similarity=0.216 Sum_probs=44.9
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhh----hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026717 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~L 113 (234)
|+||.|-|.=|..-.|...-.-|.++|-+..--. +.+..| .+-++-.++.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 111011 11234445666777777777777776654
No 146
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=48.19 E-value=1.1e+02 Score=25.04 Aligned_cols=58 Identities=14% Similarity=0.228 Sum_probs=37.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (234)
+-+..++.+..+.|+|++++.+++++++ . +|. +.+-...+..+|.. .+....+...+.
T Consensus 100 ~~~~~lg~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 100 EAWQFLGITQAENENEQAAIVALQRCLE-L--QPN-NLKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHh-c--CCC-CHHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 4566788888888999999999988887 2 133 34445555555543 344444544443
No 147
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=46.93 E-value=44 Score=27.28 Aligned_cols=69 Identities=17% Similarity=0.204 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhh----hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026717 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQ----KEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieq----k~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~L 113 (234)
|+||.|-|.=|..-.|...-.-|.++|-+..--. +.+..| .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 111111 01234445566677777776666666554
No 148
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=46.37 E-value=61 Score=23.75 Aligned_cols=47 Identities=11% Similarity=0.016 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+. +.|.+|.- ..+.++.++. +|+.++|+...++|+..
T Consensus 38 ~~A~~~~~~al~-----~~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 38 EDAHXVFQALCV-----LDHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHH-----HCTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHhc
Confidence 457788888765 35566533 3456666665 89999999999998865
No 149
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=46.36 E-value=46 Score=27.13 Aligned_cols=69 Identities=23% Similarity=0.183 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhh----hhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026717 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIE----QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ie----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~L 113 (234)
|+||.|-|.=|..-.|...-.-|.++|-+..-- .+.+..| .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998888888888874211 1111111 01234445566777777777776666654
No 150
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=45.17 E-value=94 Score=23.23 Aligned_cols=57 Identities=11% Similarity=0.008 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhhcC--------CCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhhh
Q 026717 150 AENTMLSYKAAQDIALTDL--------APTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTLT 207 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L--------~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~a 207 (234)
.+.|...|++|+++...+- ...+|-......|.+..++. +|+.++|+...++|+...
T Consensus 87 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 87 YDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALATSMK 151 (213)
T ss_dssp HHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHHHcC
Confidence 3567888999886532110 00334455666777777776 799999999999988763
No 151
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=45.11 E-value=32 Score=25.36 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.++|..+|++|.. .+|-+-...++.+..|++ .|+.++|+...++|+..
T Consensus 13 ~e~ai~~~~~a~~--------~~p~~~~~~~~la~~y~~-~~~~~~A~~~~~~al~~ 60 (150)
T 4ga2_A 13 VERYIASVQGSTP--------SPRQKSIKGFYFAKLYYE-AKEYDLAKKYICTYINV 60 (150)
T ss_dssp HHHHHHHHHHHSC--------SHHHHHTTHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc--------cCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 4556666666642 333333345677777787 79999999999998865
No 152
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=45.06 E-value=50 Score=26.94 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhh----hhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026717 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIE----QKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ie----qk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~L 113 (234)
|+||.|-|.=|..-.|...-.-|.+.|-+..-- .+.+..| .+-++-.++.++++..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999988888888888874211 1111111 01134445566666666666666666544
No 153
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=45.02 E-value=1.3e+02 Score=24.93 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|.+.|++|++ +.|.+|. ...+.+..+.. .|+.++|+...+++...
T Consensus 254 ~~A~~~~~~al~-----~~p~~~~---~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 300 (388)
T 1w3b_A 254 DLAIDTYRRAIE-----LQPHFPD---AYCNLANALKE-KGSVAEAEDCYNTALRL 300 (388)
T ss_dssp HHHHHHHHHHHH-----TCSSCHH---HHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhh
Confidence 345566666553 3455542 33444444444 68888888888877765
No 154
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=44.44 E-value=1.1e+02 Score=23.95 Aligned_cols=63 Identities=21% Similarity=0.146 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhh---------hhhhhhHHHHHHhhhh
Q 026717 10 VYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV---------IGSLRAAWRIISSIEQ 73 (234)
Q Consensus 10 i~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~---------i~~~R~s~R~l~~ieq 73 (234)
..+|.+..+.|+|++++..++++++.. ++.....+-...+..+|.+. .+....|...+..+.+
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAY-PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHC-CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 678999999999999999999999722 22334566677777787654 2445556666554433
No 155
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=44.41 E-value=76 Score=22.33 Aligned_cols=48 Identities=13% Similarity=0.105 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+.+ .|.|| ....+.++.+.. .|+.++|+...++|+..
T Consensus 33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 35678888888753 44554 334455565555 79999999999988875
No 156
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=43.30 E-value=44 Score=27.29 Aligned_cols=73 Identities=22% Similarity=0.210 Sum_probs=45.4
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026717 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~L 113 (234)
|+||.|-|.=|..-.|...-.-|.++|-+..--.+.- +.-.....+-++-.++.++|+..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111000 000000011244455667777777777777777654
No 157
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=43.22 E-value=35 Score=23.76 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=20.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
.-+++++.++.+.|+|++++.+..++.+
T Consensus 44 rA~~~lg~~~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 44 AALSLIANDHFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3456677777777777777777777775
No 158
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=42.98 E-value=90 Score=24.23 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|+++++ ..|.+|..-...++.+..|+. .|+.++|+...+++++.
T Consensus 21 ~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 21 RQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYK-NADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHH
Confidence 557777777764 356777655555666655665 89999999999888765
No 159
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=42.45 E-value=73 Score=25.91 Aligned_cols=70 Identities=14% Similarity=0.168 Sum_probs=46.2
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026717 40 TELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRSKVESELSDVCGSILKLLDSHL 113 (234)
Q Consensus 40 ~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ki~~EL~~~C~eil~lId~~L 113 (234)
|+||.|-|.=|..-.|...-.-|.++|-+..--.+.-.+ .. +.-++-.++.++|+..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk-~~---kiseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEE-LE---GISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ST---TCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc---CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998888888888874211110000 00 02244555677777777777777777654
No 160
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=37.63 E-value=93 Score=20.99 Aligned_cols=60 Identities=12% Similarity=0.078 Sum_probs=42.0
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 026717 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (234)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (234)
-.-+..++.+..+.|+|++++.++++++. . +|. ..+=...+..+|.. .+....+...+..
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~--~p~-~~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD-F--DPT-YSVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH-H--CCC-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34567789999999999999999999997 2 244 34555666777654 4555555555543
No 161
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=37.48 E-value=62 Score=23.92 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhh
Q 026717 20 ERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIG 59 (234)
Q Consensus 20 eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~ 59 (234)
++|+.+++.++.+-. .+...++.+++-.|-.-||....
T Consensus 10 ~~F~~A~~~vk~l~~--~g~~~ps~e~~L~LYaLyKQAt~ 47 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPK--NGSYRPSYEEMLRFYSYYKQATM 47 (106)
T ss_dssp HHHHHHHHHHHHSCS--SCSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHHhhhcc
Confidence 678889999988653 11136899999999888998753
No 162
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=37.25 E-value=2.2e+02 Score=25.21 Aligned_cols=46 Identities=11% Similarity=0.091 Sum_probs=36.3
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNV 57 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~ 57 (234)
+-+..++.+..+.|+|++++.+++++++ . +|. .+-...++.+|...
T Consensus 138 ~a~~~lg~~~~~~g~~~~A~~~~~~al~--~-~p~--~~~~~~lg~~~~~~ 183 (474)
T 4abn_A 138 EAWNQLGEVYWKKGDVTSAHTCFSGALT--H-CKN--KVSLQNLSMVLRQL 183 (474)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHT--T-CCC--HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh--h-CCC--HHHHHHHHHHHHHh
Confidence 4567889999999999999999999997 3 366 56667777777654
No 163
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=36.40 E-value=82 Score=26.68 Aligned_cols=47 Identities=13% Similarity=-0.029 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+..
T Consensus 213 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 213 SAAIESCNKALEL-----DSNNE---KGLSRRGEAHLA-VNDFELARADFQKVLQL 259 (336)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 4566667766654 23333 233444554444 67777777766666554
No 164
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=34.67 E-value=1e+02 Score=20.62 Aligned_cols=59 Identities=14% Similarity=0.122 Sum_probs=40.1
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 026717 6 REQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIIS 69 (234)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~ 69 (234)
-.-+..++.+..+.|+|++++.+++++++ . +|.. ..=...++.+|.. .+..-.|...+.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~-~--~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE-T--DPDY-VGTYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--STTC-THHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h--CCCc-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34567889999999999999999999997 2 2553 3345566666644 344444444443
No 165
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=34.22 E-value=66 Score=29.04 Aligned_cols=13 Identities=15% Similarity=0.113 Sum_probs=4.2
Q ss_pred hCCHHHHHHHHHH
Q 026717 190 LNSSEKACTMAKQ 202 (234)
Q Consensus 190 ~~~~~~A~~iAk~ 202 (234)
.|+.++|+....+
T Consensus 123 ~g~~~~A~~~~~~ 135 (477)
T 1wao_1 123 QKAFERAIAGDEH 135 (477)
T ss_dssp HHHHCCC------
T ss_pred HHHHHHHhccccc
Confidence 4566666665443
No 166
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=33.20 E-value=39 Score=28.85 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHP--------------IRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~p--------------irLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +|+.++|+...++|+..
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~~ 259 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLTE 259 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 45778888887653 2332 122467888887776 89999999999988765
No 167
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=31.24 E-value=2.1e+02 Score=27.00 Aligned_cols=54 Identities=17% Similarity=-0.042 Sum_probs=35.8
Q ss_pred hhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhC
Q 026717 137 LAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILN 191 (234)
Q Consensus 137 laE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~ 191 (234)
.+|....+.-.+.+++|.++|++|++..++--..-+|--.-.+||- +-.||..|
T Consensus 435 k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~-ak~yE~aG 488 (526)
T 2wb7_A 435 KAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNA-AKKHEMAG 488 (526)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHH-HHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHH-hhhhhhcc
Confidence 3566677777889999999999999999753334444333344443 33366644
No 168
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=30.84 E-value=98 Score=22.57 Aligned_cols=49 Identities=16% Similarity=0.269 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCH--HHHHHHHHHHhhh
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSS--EKACTMAKQEKTL 206 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~--~~A~~iAk~Afd~ 206 (234)
.+.|...|++|+.+. |.+| ....+.+..+|.-.|+. ++|+...++++..
T Consensus 60 ~~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 60 YSNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 356889999998764 4444 34556666655557888 9999999988865
No 169
>2w9y_A CE-FAR-7, fatty acid/retinol binding protein protein 7, isoform A, confirmed by transcript...; lipid transport; HET: CSX; 1.80A {Caenorhabditis elegans}
Probab=30.38 E-value=80 Score=24.69 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccc--hHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 026717 96 SELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGD--ERKAAAENTMLSYKAAQDIALTDLAPTHP 173 (234)
Q Consensus 96 ~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~--~~~~~~~~a~~aY~~A~~~a~~~L~pt~p 173 (234)
.+|..-...+.+.|...+ .+.+++++-|.-+|.+-+---.++...|. ...++.. ..+.|+.-.+-+++.|..+-|
T Consensus 60 p~L~~K~~~l~~~lk~Ki--~~L~Peak~Fv~kli~~~r~l~~~~~~G~k~~~~~lK~-~~~~ykaLS~~aK~dL~k~FP 136 (140)
T 2w9y_A 60 PELGKRLATVLEGNKKRL--DGLSPAAVEYAKKLIHMVTTTLCSLTVGKPIDDADAKR-LHQEFQSLSSEDQAALRKNNP 136 (140)
T ss_dssp HHHHHHHHHHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCTHHHHH-HHHHHHTSCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHH-HHHHHHcCCHHHHHHHHHhCc
Confidence 345555556667777776 56689999999999887766666654443 2222222 237777555555554444444
No 170
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=28.48 E-value=1.7e+02 Score=21.11 Aligned_cols=27 Identities=7% Similarity=0.158 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
.+..++.+..+.|+|++++.++.++++
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~ 39 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALS 39 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344555555555666666666655554
No 171
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=28.18 E-value=77 Score=25.98 Aligned_cols=28 Identities=11% Similarity=0.082 Sum_probs=20.1
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
+.+..+|.+..+.|+|++++.++.+++.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAIT 32 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4556677777777777777777777765
No 172
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=27.13 E-value=1.3e+02 Score=23.46 Aligned_cols=59 Identities=14% Similarity=-0.003 Sum_probs=31.7
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hhHHHHHHHHHHH---HHHhCCHHHHHHHHHHHhh
Q 026717 142 VGDERKAAAENTMLSYKAAQDIALTDLAPTHP---IRLGLALNFSVFY---YEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 142 ~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~p---irLgL~LN~SVF~---yEi~~~~~~A~~iAk~Afd 205 (234)
.+.+|...-+.|.+.|+.|++ +.|.+| +.+|.+|--..-+ -+.++..++|+..-++|+.
T Consensus 10 ~~~~r~~~feeA~~~~~~Ai~-----l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ 74 (158)
T 1zu2_A 10 TEFDRILLFEQIRQDAENTYK-----SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL 74 (158)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH-----HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHhHHHHHHHHHHHHHH-----HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH
Confidence 455676777788888888875 445665 3344433322111 1122334566665555554
No 173
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=25.57 E-value=1.4e+02 Score=26.82 Aligned_cols=27 Identities=4% Similarity=0.014 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHhhh
Q 026717 179 ALNFSVFYYEIL---NSSEKACTMAKQEKTL 206 (234)
Q Consensus 179 ~LN~SVF~yEi~---~~~~~A~~iAk~Afd~ 206 (234)
..|.+..++. + |+.++|.+..+++++.
T Consensus 128 ~~~l~~~~~~-~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 128 TAQLLNWRRR-LCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHHH-TTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-hhccccHHHHHHHHHHHHhc
Confidence 3444444444 5 7777777777777666
No 174
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=24.89 E-value=89 Score=21.83 Aligned_cols=27 Identities=19% Similarity=0.212 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
+++..|=-.+++|+|++++.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345555556888999999988877765
No 175
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=24.79 E-value=1.5e+02 Score=19.24 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=25.6
Q ss_pred HHhHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 6 REQYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 6 re~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
-+.+..++......|+|++++....+.+.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 45677888999999999999999999997
No 176
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=24.78 E-value=2.9e+02 Score=22.72 Aligned_cols=17 Identities=12% Similarity=0.057 Sum_probs=10.1
Q ss_pred hCCHHHHHHHHHHHhhh
Q 026717 190 LNSSEKACTMAKQEKTL 206 (234)
Q Consensus 190 ~~~~~~A~~iAk~Afd~ 206 (234)
.|+.++|+...++++..
T Consensus 216 ~~~~~~A~~~~~~al~~ 232 (388)
T 1w3b_A 216 ARIFDRAVAAYLRALSL 232 (388)
T ss_dssp TTCTTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 56666666666655543
No 177
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=24.35 E-value=3.1e+02 Score=22.77 Aligned_cols=111 Identities=18% Similarity=0.291 Sum_probs=60.9
Q ss_pred HHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHHHHHH
Q 026717 12 LAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYR 91 (234)
Q Consensus 12 ~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr 91 (234)
.|++.+....|-.|++-+|.-.. +..|..|.=.-||=-+.. +|.+. + .++++..=+..-
T Consensus 100 iarllekiqkyfQ~IEtlK~ql~--------nf~e~RLiYDHYKlKvdE----------LEK~~--K-dSeKI~RNQsKL 158 (294)
T 3caz_A 100 IARLLEKIQKYRQEIEEIKKEYK--------ETDKYRERYDHYKVKLDN----------LEKKN--K-DQERIERNQQKF 158 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHH----------HHHHT--C-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHHhHHH----------HHhcc--c-hHHHHHHhHHHh
Confidence 57777877778778877765332 123556666666654433 23211 1 112222222222
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhh
Q 026717 92 SKVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALT 166 (234)
Q Consensus 92 ~ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~ 166 (234)
.+-+.--..+|-|+|+-.++ +-|.|||.++|..+. +=...--|-+|++.|..
T Consensus 159 ssAEtaYkqvcsDiInkMnk-----------------ll~n~~riineaasa------vwstqlqyakaleaaan 210 (294)
T 3caz_A 159 KDAEAAYSSVCADLIQKMET-----------------VWKKHVSIFAEAASA------VWSTQLQYAKALEAAAN 210 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHG
T ss_pred hhHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhcC
Confidence 33444555667777765553 457788888876543 22234457788877753
No 178
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=24.30 E-value=1.8e+02 Score=23.91 Aligned_cols=47 Identities=9% Similarity=-0.022 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|+++++. .|.+| .+..|.++.+.. +|+.++|...-++|+..
T Consensus 183 ~eA~~~~~~~l~~-----~p~~~---~~~~~la~~~~~-~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 183 QDAYYIFQEMADK-----CSPTL---LLLNGQAACHMA-QGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHHHHHHHH-----SCCCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 3455555555532 33443 344455555554 89999999999888875
No 179
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=24.14 E-value=45 Score=24.29 Aligned_cols=53 Identities=13% Similarity=0.234 Sum_probs=31.5
Q ss_pred hhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH----HHHHHHHHHH
Q 026717 131 GDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIRLG----LALNFSVFYY 187 (234)
Q Consensus 131 gDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pirLg----L~LN~SVF~y 187 (234)
|+---||-.+...-+ .-+....+..+.|++-- +..|.||..|+ +.-+|++|+-
T Consensus 12 ~~~~~~Ld~vs~~f~--~~a~~~~~~l~~Al~~L--~~~psNPa~LAe~Qa~lseynl~RN 68 (92)
T 2g0u_A 12 YEWSGYLTGIGRAFD--DGVKDLNKQLQDAQANL--TKNPSDPTALANYQMIMSEYNLYRN 68 (92)
T ss_dssp SSSTHHHHHHHGGGC--TTTHHHHHHHHHHHHHH--HHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcccchHHHHHHHHH--HHHHHHHHHHHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344445555443221 12344566677776543 36899999998 6677887753
No 180
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=23.44 E-value=1.2e+02 Score=26.16 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|++ +.|.++ ....+.+..|+. +|+.++|+...++|+..
T Consensus 290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~~-~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQG-LKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 457778888775 445554 334555555555 89999999999998876
No 181
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=23.38 E-value=2.1e+02 Score=20.87 Aligned_cols=45 Identities=16% Similarity=0.182 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 152 NTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 152 ~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (234)
.|...|++|+++ +|-.....++.+..+.. .|+.++|+...++++.
T Consensus 92 ~a~~~~~~al~~--------~P~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~ 136 (176)
T 2r5s_A 92 PELKRLEQELAA--------NPDNFELACELAVQYNQ-VGRDEEALELLWNILK 136 (176)
T ss_dssp HHHHHHHHHHHH--------STTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHh--------CCCCHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
No 182
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=22.78 E-value=1.5e+02 Score=18.80 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=15.3
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 9 YVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 9 li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
+..++.+..+.|+|++++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34455555556666666666666554
No 183
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=22.54 E-value=4.1e+02 Score=23.65 Aligned_cols=59 Identities=8% Similarity=-0.099 Sum_probs=40.9
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHh
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISS 70 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ 70 (234)
+-+..+|.+..+.|+|+++++++++.++ . ++. +.+-...+..+|-. .+....|...+..
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~--~-~p~-~~~~~~~lg~~~~~-~g~~~~A~~~~~~ 82 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLA--L-HPG-HPEAVARLGRVRWT-QQRHAEAAVLLQQ 82 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHT--T-STT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH--h-CCC-CHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 4566788899999999999999999997 2 243 45556666666644 3555555555543
No 184
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=22.49 E-value=1.5e+02 Score=25.92 Aligned_cols=67 Identities=9% Similarity=0.065 Sum_probs=47.1
Q ss_pred HHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCCchh-HHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 127 LKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTHPIR-LGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 127 ~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~pir-LgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (234)
+-.-|-+|-.+-++.-|+ -++|.+.|++|+++. |-. +..-.-|+-|+..-.++++.|....++|+.
T Consensus 202 ~~~LG~lY~~vPp~~gGd-----~ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 202 WNVLTKFYAAAPESFGGG-----MEKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHSCTTTTCC-----HHHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCccCCC-----HHHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 334455555555555555 367899999999864 332 555667777777767999999999999876
Q ss_pred h
Q 026717 206 L 206 (234)
Q Consensus 206 ~ 206 (234)
.
T Consensus 269 a 269 (301)
T 3u64_A 269 I 269 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 185
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=21.47 E-value=1.1e+02 Score=21.12 Aligned_cols=27 Identities=19% Similarity=0.431 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 8 QYVYLAKLAEQAERYEEMVKFMDSLVT 34 (234)
Q Consensus 8 ~li~~Aklaeq~eRy~Dm~~~mk~~~~ 34 (234)
+++..|=-.+++|+|++++.+.+..++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 355566566888999998888877665
No 186
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=21.45 E-value=1.5e+02 Score=24.96 Aligned_cols=68 Identities=6% Similarity=-0.067 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHH--------HHHHHHHHhhhhhhhhcchhhhcccc
Q 026717 150 AENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEK--------ACTMAKQEKTLTRPLRRPLLSWTLWV 221 (234)
Q Consensus 150 ~~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~--------A~~iAk~Afd~a~~l~dni~~W~~~~ 221 (234)
...-...-.+.+++...+|-|.. ---|||+-..||.-+ ..+-|.+|+..|..+-.. ....
T Consensus 94 e~EL~~iC~dil~lld~~Lip~a--------EskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~----~L~p 161 (227)
T 2o8p_A 94 RKDIKAFLQSFEDCVDRLVEKSF--------FSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCE----HPDK 161 (227)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCSH--------HHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH----CGGG
T ss_pred HHHHHHHHhhHHHHHHHhccCcH--------HHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHh----hCCC
Confidence 33344455667788888888875 446999988775522 144555555555433221 2566
Q ss_pred CCCceEee
Q 026717 222 KNPTRIAL 229 (234)
Q Consensus 222 ~~~~~~~~ 229 (234)
.+|+|+.|
T Consensus 162 thPirLGL 169 (227)
T 2o8p_A 162 IEQLPLGF 169 (227)
T ss_dssp GGGSCHHH
T ss_pred CChHHHHH
Confidence 77888765
No 187
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=21.32 E-value=2.3e+02 Score=22.57 Aligned_cols=75 Identities=15% Similarity=0.101 Sum_probs=48.5
Q ss_pred CCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHhhcCCCCC----chhHHHHHHHHHHHHHHhC
Q 026717 116 SATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIALTDLAPTH----PIRLGLALNFSVFYYEILN 191 (234)
Q Consensus 116 ~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a~~~L~pt~----pirLgL~LN~SVF~yEi~~ 191 (234)
.+.++++-.-|+++--+. .+..-+...++-.+.|+.|.. ++||+. .-+.-|=++|+.| .++ +
T Consensus 9 ~p~~yd~W~~yl~llE~~--------g~p~~d~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~ 74 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKN--------SVPLSDALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-Q 74 (161)
T ss_dssp -CCSHHHHHHHHHHHHHH--------TCSCCHHHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-H
T ss_pred CCCCHHHHHHHHHHHHHc--------CCCchhhHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-c
Confidence 445677777777663332 111111566778899998864 566653 3455688999998 454 8
Q ss_pred CHHHHHHHHHHHh
Q 026717 192 SSEKACTMAKQEK 204 (234)
Q Consensus 192 ~~~~A~~iAk~Af 204 (234)
|+++|.++=+.+.
T Consensus 75 D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 75 EPDDARDYFQMAR 87 (161)
T ss_dssp CGGGCHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9998888777774
No 188
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=21.03 E-value=1.4e+02 Score=25.16 Aligned_cols=47 Identities=9% Similarity=0.029 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.++ ....|.+.-|+. +|+.++|+...++|+..
T Consensus 247 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~a~~~-~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 247 DEAIGHCNIVLTE-----EEKNP---KALFRRGKAKAE-LGQMDSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHT-TTCHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 4578888888764 34454 344556665555 89999999999988765
No 189
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=20.99 E-value=4e+02 Score=25.09 Aligned_cols=74 Identities=19% Similarity=0.413 Sum_probs=48.4
Q ss_pred hCCHHHHHHHHHHHhhccCCCCCCCHH---HHHHHHH---HHHhhhhhhhhHHHHHHhhhhhhhcccchhhHHHHHHHHH
Q 026717 19 AERYEEMVKFMDSLVTSSTPATELTVE---ERNLLSV---AYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVSLVKDYRS 92 (234)
Q Consensus 19 ~eRy~Dm~~~mk~~~~~~~~~~~Ls~e---ERnLlsv---ayKn~i~~~R~s~R~l~~ieqk~~~~~~~~~~~~i~~yr~ 92 (234)
.++|.+-++-+++++... .....+ |-.+|-. +|..++..-+..+..|..--++|....+.+...+++.||.
T Consensus 120 ~~k~g~~l~~v~~~~~~~---~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~ 196 (526)
T 3iyk_A 120 KEKFGKELEEVYNFMNGE---ANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRD 196 (526)
T ss_pred HHHHHHHHHHHHHHHHHh---hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Confidence 355666677777776411 334443 4445554 4566777778888888776777766556666788888888
Q ss_pred HHH
Q 026717 93 KVE 95 (234)
Q Consensus 93 ki~ 95 (234)
++.
T Consensus 197 k~~ 199 (526)
T 3iyk_A 197 KID 199 (526)
T ss_pred HHH
Confidence 764
No 190
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=20.88 E-value=2.5e+02 Score=20.48 Aligned_cols=165 Identities=8% Similarity=-0.064 Sum_probs=84.0
Q ss_pred HhHHHHHHHHHHhCCHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhhhhhhhHHHHHHhhhhhhhcccc-hhhHH
Q 026717 7 EQYVYLAKLAEQAERYEEMVKFMDSLVTSSTPATELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKN-EEHVS 85 (234)
Q Consensus 7 e~li~~Aklaeq~eRy~Dm~~~mk~~~~~~~~~~~Ls~eERnLlsvayKn~i~~~R~s~R~l~~ieqk~~~~~~-~~~~~ 85 (234)
+-+..++.+..+.|+|++++.++.++++ . .+. +.+-...+..+|-...+....+...+....+....... .....
T Consensus 43 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~--~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 43 LAWLVRAEIYQYLKVNDKAQESFRQALS-I--KPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH-H--CTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHH-h--CCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 4566788889999999999999999987 2 133 44455556666544325556666666544331100000 11111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhhhccCCCCCCchhHHHHHHhhhhhhhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Q 026717 86 LVKDYRS-KVESELSDVCGSILKLLDSHLVPSATAGESKVFYLKMKGDYYRYLAEFKVGDERKAAAENTMLSYKAAQDIA 164 (234)
Q Consensus 86 ~i~~yr~-ki~~EL~~~C~eil~lId~~Lip~~~~~eskVfy~KmkgDyyRYlaE~~~~~~~~~~~~~a~~aY~~A~~~a 164 (234)
...-|.. .--++-...+..++++ -|.. ...+...|..|.-. |+ .+.|...|++++++.
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~------~~~~~~la~~~~~~-----~~-----~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAA-----QPQF------PPAFKELARTKMLA-----GQ-----LGDADYYFKKYQSRV 177 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----STTC------HHHHHHHHHHHHHH-----TC-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC------chHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHhC
Confidence 1111111 1112222333333322 1221 11222334333221 11 355777888877643
Q ss_pred hhcCCC-CCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Q 026717 165 LTDLAP-THPIRLGLALNFSVFYYEILNSSEKACTMAKQEKT 205 (234)
Q Consensus 165 ~~~L~p-t~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd 205 (234)
| .+|.. ++....+|...|+.+.|....+.+..
T Consensus 178 -----~~~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~ 210 (225)
T 2vq2_A 178 -----EVLQADD----LLLGWKIAKALGNAQAAYEYEAQLQA 210 (225)
T ss_dssp -----CSCCHHH----HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CCCCHHH----HHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 3 44443 23444555668999998888777653
No 191
>3s0r_A De novo designed helical assembly; interacts with single walled nanotube (SWNT), de novo protei; 2.45A {Artificial gene}
Probab=20.84 E-value=85 Score=17.57 Aligned_cols=17 Identities=24% Similarity=0.149 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHhhhhhh
Q 026717 193 SEKACTMAKQEKTLTRP 209 (234)
Q Consensus 193 ~~~A~~iAk~Afd~a~~ 209 (234)
.+.|.+.|++|++.+++
T Consensus 3 aesaleyaqqalekaql 19 (30)
T 3s0r_A 3 AESALEYAQQALEKAQL 19 (30)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHH
Confidence 45677777777777643
No 192
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=20.05 E-value=2.1e+02 Score=25.30 Aligned_cols=47 Identities=9% Similarity=-0.080 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhh
Q 026717 151 ENTMLSYKAAQDIALTDLAPTHPIRLGLALNFSVFYYEILNSSEKACTMAKQEKTL 206 (234)
Q Consensus 151 ~~a~~aY~~A~~~a~~~L~pt~pirLgL~LN~SVF~yEi~~~~~~A~~iAk~Afd~ 206 (234)
+.|...|++|+++ .|.++ ....|.+..|+. +|+.++|+...++|+..
T Consensus 334 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~a~~~-~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 334 TKAVECCDKALGL-----DSANE---KGLYRRGEAQLL-MNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHHh
Confidence 4577778888764 33443 334455555554 78888888888777654
Done!