Query 026718
Match_columns 234
No_of_seqs 418 out of 1269
Neff 12.3
Searched_HMMs 46136
Date Fri Mar 29 11:45:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026718.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026718hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 7E-37 1.5E-41 215.2 20.3 226 2-233 26-253 (255)
2 PRK00870 haloalkane dehalogena 100.0 5.1E-34 1.1E-38 205.5 15.8 224 2-233 69-301 (302)
3 PLN02824 hydrolase, alpha/beta 100.0 2.4E-33 5.2E-38 201.4 17.6 220 5-233 54-294 (294)
4 TIGR02240 PHA_depoly_arom poly 100.0 4E-33 8.7E-38 198.4 18.2 217 4-233 49-266 (276)
5 KOG4178 Soluble epoxide hydrol 100.0 8.6E-33 1.9E-37 190.3 17.3 226 2-234 67-321 (322)
6 PLN02211 methyl indole-3-aceta 100.0 4E-32 8.6E-37 191.9 20.3 224 2-232 41-269 (273)
7 PRK03592 haloalkane dehalogena 100.0 3.6E-32 7.8E-37 195.4 18.1 227 2-232 50-288 (295)
8 PRK03204 haloalkane dehalogena 100.0 4E-32 8.8E-37 193.6 17.7 223 4-231 58-286 (286)
9 TIGR03343 biphenyl_bphD 2-hydr 100.0 3.1E-32 6.8E-37 194.8 16.8 221 3-231 57-281 (282)
10 PLN02679 hydrolase, alpha/beta 100.0 2.6E-32 5.7E-37 200.1 15.8 220 4-233 112-357 (360)
11 PLN02385 hydrolase; alpha/beta 100.0 3.4E-32 7.4E-37 199.3 14.9 218 2-234 111-346 (349)
12 PLN03087 BODYGUARD 1 domain co 100.0 2.9E-31 6.3E-36 197.4 19.4 225 4-232 230-478 (481)
13 PRK10673 acyl-CoA esterase; Pr 100.0 1.2E-30 2.6E-35 184.1 20.6 208 4-232 40-254 (255)
14 PRK06489 hypothetical protein; 100.0 6.1E-31 1.3E-35 193.3 18.9 219 4-233 103-357 (360)
15 PRK10349 carboxylesterase BioH 100.0 2E-31 4.2E-36 188.0 14.1 205 5-232 38-255 (256)
16 TIGR03056 bchO_mg_che_rel puta 100.0 3.4E-30 7.3E-35 184.0 19.2 218 4-231 52-278 (278)
17 TIGR03611 RutD pyrimidine util 100.0 3.9E-31 8.6E-36 186.7 13.4 213 4-232 37-257 (257)
18 KOG4409 Predicted hydrolase/ac 100.0 2.4E-30 5.3E-35 178.9 16.2 222 6-233 116-364 (365)
19 PRK07581 hypothetical protein; 100.0 1.3E-30 2.9E-35 190.5 15.6 225 2-233 67-336 (339)
20 PLN03084 alpha/beta hydrolase 100.0 8E-30 1.7E-34 186.3 18.8 223 4-232 151-383 (383)
21 PLN02298 hydrolase, alpha/beta 100.0 3.1E-30 6.7E-35 188.0 16.5 218 2-233 83-317 (330)
22 PRK08775 homoserine O-acetyltr 100.0 3.3E-30 7.2E-35 188.3 16.6 217 4-232 97-338 (343)
23 PLN02578 hydrolase 100.0 5.4E-30 1.2E-34 187.8 17.3 221 4-231 110-353 (354)
24 KOG1454 Predicted hydrolase/ac 100.0 3.2E-30 7E-35 184.5 15.5 219 6-233 86-324 (326)
25 PHA02857 monoglyceride lipase; 100.0 9.5E-30 2.1E-34 181.3 15.6 214 2-233 48-273 (276)
26 PF12697 Abhydrolase_6: Alpha/ 100.0 1.6E-30 3.6E-35 180.2 11.3 202 4-225 22-228 (228)
27 TIGR01738 bioH putative pimelo 100.0 1.1E-29 2.4E-34 178.0 13.9 209 4-230 28-245 (245)
28 TIGR02427 protocat_pcaD 3-oxoa 100.0 9.2E-30 2E-34 179.0 13.0 213 4-231 37-251 (251)
29 PRK10749 lysophospholipase L2; 100.0 1.6E-28 3.6E-33 178.5 19.8 221 2-233 77-329 (330)
30 TIGR01250 pro_imino_pep_2 prol 100.0 2.6E-29 5.6E-34 180.2 15.3 222 4-231 51-288 (288)
31 TIGR01392 homoserO_Ac_trn homo 100.0 5.2E-29 1.1E-33 182.6 16.4 228 2-231 68-351 (351)
32 PRK11126 2-succinyl-6-hydroxy- 100.0 7.5E-29 1.6E-33 173.6 16.4 209 6-232 27-241 (242)
33 TIGR03695 menH_SHCHC 2-succiny 100.0 9.8E-28 2.1E-32 168.6 17.5 219 5-231 26-251 (251)
34 PRK00175 metX homoserine O-ace 100.0 7.7E-28 1.7E-32 177.7 15.9 226 4-233 89-374 (379)
35 KOG1455 Lysophospholipase [Lip 100.0 2.4E-28 5.2E-33 166.0 11.6 216 1-233 77-312 (313)
36 COG2267 PldB Lysophospholipase 100.0 2.1E-27 4.6E-32 168.5 16.8 220 2-233 57-294 (298)
37 PLN02894 hydrolase, alpha/beta 100.0 4E-27 8.7E-32 174.5 18.5 219 5-233 130-385 (402)
38 PLN02652 hydrolase; alpha/beta 100.0 2E-26 4.4E-31 169.5 17.5 215 2-233 159-387 (395)
39 PF00561 Abhydrolase_1: alpha/ 99.9 2E-28 4.3E-33 170.2 6.4 213 7-227 1-229 (230)
40 PRK14875 acetoin dehydrogenase 99.9 1.9E-26 4.2E-31 171.1 15.7 211 5-233 156-371 (371)
41 TIGR01249 pro_imino_pep_1 prol 99.9 7.6E-26 1.6E-30 163.1 14.9 81 3-84 50-131 (306)
42 PRK06765 homoserine O-acetyltr 99.9 4.4E-26 9.5E-31 167.1 13.6 226 2-232 95-387 (389)
43 TIGR01607 PST-A Plasmodium sub 99.9 7.5E-26 1.6E-30 164.1 14.1 212 2-231 70-331 (332)
44 PLN02980 2-oxoglutarate decarb 99.9 4.4E-26 9.5E-31 192.2 13.9 219 5-232 1396-1638(1655)
45 PLN02511 hydrolase 99.9 3.3E-27 7.2E-32 174.3 6.1 220 3-232 126-364 (388)
46 KOG2382 Predicted alpha/beta h 99.9 3.5E-26 7.5E-31 157.9 9.5 212 6-233 80-313 (315)
47 KOG2984 Predicted hydrolase [G 99.9 1E-25 2.2E-30 144.0 6.3 203 6-233 71-276 (277)
48 PRK05077 frsA fermentation/res 99.9 1.4E-23 3E-28 155.9 18.0 193 2-233 218-412 (414)
49 PRK05855 short chain dehydroge 99.9 2.2E-24 4.8E-29 168.9 13.4 226 4-233 49-292 (582)
50 TIGR03100 hydr1_PEP hydrolase, 99.9 1.2E-23 2.6E-28 149.1 14.6 209 2-232 53-274 (274)
51 COG1647 Esterase/lipase [Gener 99.9 1.8E-23 3.9E-28 135.8 13.6 199 2-232 38-243 (243)
52 PRK10985 putative hydrolase; P 99.9 2.8E-23 6.1E-28 150.7 8.8 217 2-232 83-319 (324)
53 TIGR01836 PHA_synth_III_C poly 99.9 5.3E-22 1.2E-26 145.6 13.7 225 2-233 90-350 (350)
54 PRK13604 luxD acyl transferase 99.9 2.2E-21 4.7E-26 135.7 15.2 184 2-219 60-249 (307)
55 TIGR01838 PHA_synth_I poly(R)- 99.9 7.1E-22 1.5E-26 149.0 11.9 215 2-220 216-462 (532)
56 PRK11071 esterase YqiA; Provis 99.9 2.9E-20 6.3E-25 124.2 14.3 159 5-231 31-189 (190)
57 PF00326 Peptidase_S9: Prolyl 99.9 5.8E-21 1.2E-25 130.9 10.4 184 2-233 10-209 (213)
58 COG0596 MhpC Predicted hydrola 99.8 2.3E-19 4.9E-24 127.3 17.4 217 7-231 51-280 (282)
59 PLN02872 triacylglycerol lipas 99.8 2E-20 4.4E-25 137.5 10.2 231 2-233 103-389 (395)
60 KOG1552 Predicted alpha/beta h 99.8 1.6E-19 3.5E-24 120.9 11.2 161 6-231 88-250 (258)
61 KOG2564 Predicted acetyltransf 99.8 1.2E-20 2.6E-25 126.9 5.6 76 6-82 102-181 (343)
62 PRK10566 esterase; Provisional 99.8 3.5E-19 7.5E-24 125.2 13.3 181 2-233 50-248 (249)
63 PRK07868 acyl-CoA synthetase; 99.8 2.5E-18 5.4E-23 141.2 16.8 228 2-233 95-361 (994)
64 COG3208 GrsT Predicted thioest 99.8 3E-18 6.6E-23 114.1 13.2 190 6-231 33-234 (244)
65 KOG4667 Predicted esterase [Li 99.8 1.4E-18 2.9E-23 112.7 11.2 184 2-218 58-244 (269)
66 PF12695 Abhydrolase_5: Alpha/ 99.8 1.8E-17 3.8E-22 106.9 11.6 123 2-213 22-145 (145)
67 KOG4391 Predicted alpha/beta h 99.7 3E-18 6.6E-23 111.3 6.3 174 4-232 104-281 (300)
68 TIGR03101 hydr2_PEP hydrolase, 99.7 1.4E-17 3E-22 116.1 8.8 82 2-84 52-135 (266)
69 PF06342 DUF1057: Alpha/beta h 99.7 1.3E-16 2.7E-21 108.6 12.5 83 2-86 58-140 (297)
70 COG2021 MET2 Homoserine acetyl 99.7 2.3E-16 5E-21 111.3 13.3 229 3-232 89-367 (368)
71 KOG2931 Differentiation-relate 99.7 8.2E-16 1.8E-20 104.6 14.5 216 6-233 78-306 (326)
72 PF03096 Ndr: Ndr family; Int 99.7 6.6E-16 1.4E-20 106.3 13.8 209 5-233 54-279 (283)
73 COG0429 Predicted hydrolase of 99.7 3.1E-17 6.7E-22 113.8 6.2 218 2-233 100-340 (345)
74 PLN02442 S-formylglutathione h 99.7 2.2E-15 4.7E-20 107.3 15.3 81 3-84 74-179 (283)
75 TIGR02821 fghA_ester_D S-formy 99.7 3.8E-15 8.2E-20 105.9 15.3 80 4-83 70-173 (275)
76 COG2945 Predicted hydrolase of 99.7 2.2E-15 4.8E-20 96.3 12.0 149 2-231 56-205 (210)
77 COG1506 DAP2 Dipeptidyl aminop 99.7 1.7E-15 3.6E-20 118.7 12.6 184 2-233 419-616 (620)
78 PF06500 DUF1100: Alpha/beta h 99.6 1.1E-14 2.4E-19 105.6 14.1 189 2-231 214-407 (411)
79 PRK11460 putative hydrolase; P 99.6 1.7E-14 3.6E-19 99.8 12.5 105 47-231 102-210 (232)
80 TIGR01849 PHB_depoly_PhaZ poly 99.6 8E-14 1.7E-18 102.0 15.4 81 2-86 126-211 (406)
81 KOG1838 Alpha/beta hydrolase [ 99.6 1.3E-14 2.9E-19 104.5 11.1 206 2-218 150-368 (409)
82 PRK05371 x-prolyl-dipeptidyl a 99.6 1.2E-13 2.6E-18 109.9 16.4 80 2-83 275-373 (767)
83 COG4757 Predicted alpha/beta h 99.6 4.2E-14 9.1E-19 93.2 10.3 211 2-230 53-280 (281)
84 TIGR01839 PHA_synth_II poly(R) 99.6 7.8E-14 1.7E-18 105.1 13.0 81 2-86 243-331 (560)
85 TIGR03230 lipo_lipase lipoprot 99.6 1.9E-14 4.1E-19 106.4 8.9 81 5-86 72-157 (442)
86 PF01738 DLH: Dienelactone hyd 99.6 4.7E-14 1E-18 97.1 10.1 154 2-233 37-217 (218)
87 PLN00021 chlorophyllase 99.5 2.2E-13 4.7E-18 97.8 13.0 81 2-83 75-166 (313)
88 TIGR01840 esterase_phb esteras 99.5 4.6E-13 1E-17 91.7 12.3 81 4-84 41-131 (212)
89 PF02230 Abhydrolase_2: Phosph 99.5 3.6E-13 7.8E-18 92.5 10.0 124 30-232 83-214 (216)
90 PF10230 DUF2305: Uncharacteri 99.5 2.3E-12 5E-17 90.7 13.8 86 4-89 30-128 (266)
91 PF05448 AXE1: Acetyl xylan es 99.5 6.1E-13 1.3E-17 95.6 10.7 188 3-233 106-320 (320)
92 PF00975 Thioesterase: Thioest 99.5 1.2E-12 2.6E-17 90.9 11.7 194 6-230 27-229 (229)
93 PF06821 Ser_hydrolase: Serine 99.5 4.5E-13 9.7E-18 87.6 8.7 122 28-219 37-159 (171)
94 TIGR00976 /NonD putative hydro 99.5 1.7E-12 3.7E-17 101.0 12.4 81 2-84 49-133 (550)
95 PF05728 UPF0227: Uncharacteri 99.4 7.6E-12 1.6E-16 82.7 13.3 147 28-231 40-187 (187)
96 cd00707 Pancreat_lipase_like P 99.4 2.7E-13 5.8E-18 96.0 6.0 82 4-86 64-150 (275)
97 PF08538 DUF1749: Protein of u 99.4 7.4E-13 1.6E-17 92.4 6.9 76 3-86 60-151 (303)
98 PF09752 DUF2048: Uncharacteri 99.4 1.3E-11 2.8E-16 87.6 12.7 212 2-231 117-347 (348)
99 PRK10162 acetyl esterase; Prov 99.3 8E-11 1.7E-15 85.5 14.0 79 5-84 111-196 (318)
100 COG0400 Predicted esterase [Ge 99.3 1.4E-11 3.1E-16 82.5 9.3 113 34-225 84-201 (207)
101 COG3243 PhaC Poly(3-hydroxyalk 99.3 1.1E-11 2.4E-16 89.3 8.4 80 2-85 135-219 (445)
102 COG3545 Predicted esterase of 99.3 5.6E-11 1.2E-15 75.5 10.5 135 28-232 41-178 (181)
103 KOG3043 Predicted hydrolase re 99.3 1.6E-11 3.4E-16 80.9 7.5 151 2-233 63-240 (242)
104 PF02129 Peptidase_S15: X-Pro 99.3 2.8E-11 6.1E-16 86.1 9.0 81 2-84 53-137 (272)
105 PF08840 BAAT_C: BAAT / Acyl-C 99.3 2.4E-11 5.1E-16 82.9 8.1 51 33-84 5-57 (213)
106 COG0412 Dienelactone hydrolase 99.3 2.4E-10 5.3E-15 79.0 12.8 153 1-232 49-232 (236)
107 PRK10252 entF enterobactin syn 99.3 3E-10 6.5E-15 97.4 15.9 77 4-83 1092-1171(1296)
108 PF06057 VirJ: Bacterial virul 99.3 1.4E-10 2.9E-15 75.5 10.1 76 2-83 25-107 (192)
109 PRK10115 protease 2; Provision 99.2 3E-10 6.5E-15 90.2 13.6 83 2-84 470-560 (686)
110 COG3458 Acetyl esterase (deace 99.2 1.6E-10 3.6E-15 78.4 9.7 185 2-231 105-315 (321)
111 KOG2565 Predicted hydrolases o 99.2 2.1E-10 4.4E-15 81.3 9.8 73 6-79 188-260 (469)
112 PTZ00472 serine carboxypeptida 99.2 1.7E-09 3.7E-14 82.1 15.2 78 6-83 121-216 (462)
113 PF06028 DUF915: Alpha/beta hy 99.2 6.9E-10 1.5E-14 77.0 11.7 153 29-231 81-253 (255)
114 COG3571 Predicted hydrolase of 99.2 1.2E-09 2.6E-14 68.4 11.1 157 2-232 39-210 (213)
115 PF02273 Acyl_transf_2: Acyl t 99.2 1.3E-09 2.9E-14 73.1 11.9 186 2-220 53-243 (294)
116 PLN02733 phosphatidylcholine-s 99.2 8.5E-11 1.8E-15 87.8 6.9 80 2-86 117-204 (440)
117 COG3319 Thioesterase domains o 99.1 2.8E-09 6.1E-14 73.8 12.7 76 6-84 26-104 (257)
118 TIGR03502 lipase_Pla1_cef extr 99.1 3.4E-10 7.4E-15 89.5 7.3 67 2-68 472-575 (792)
119 KOG2100 Dipeptidyl aminopeptid 99.1 2.9E-09 6.2E-14 85.2 12.4 176 3-231 555-745 (755)
120 smart00824 PKS_TE Thioesterase 99.1 4.2E-09 9.1E-14 72.2 11.9 77 5-84 24-103 (212)
121 KOG2281 Dipeptidyl aminopeptid 99.1 1.6E-09 3.5E-14 82.1 10.1 183 1-233 671-867 (867)
122 PF07859 Abhydrolase_3: alpha/ 99.0 1.6E-09 3.5E-14 74.3 7.9 71 5-83 28-110 (211)
123 PF12146 Hydrolase_4: Putative 99.0 4.7E-10 1E-14 63.4 3.5 41 2-42 39-79 (79)
124 KOG2624 Triglyceride lipase-ch 99.0 1.5E-08 3.1E-13 74.7 11.6 83 2-84 102-200 (403)
125 PF10503 Esterase_phd: Esteras 99.0 3.3E-08 7.1E-13 67.3 12.4 39 46-84 95-133 (220)
126 KOG3975 Uncharacterized conser 99.0 2.1E-08 4.5E-13 67.6 11.1 214 7-230 60-300 (301)
127 PF03583 LIP: Secretory lipase 98.9 8.7E-09 1.9E-13 73.7 8.6 43 173-215 219-266 (290)
128 KOG4627 Kynurenine formamidase 98.9 2.4E-09 5.3E-14 69.9 4.2 170 3-230 94-268 (270)
129 KOG2551 Phospholipase/carboxyh 98.9 8.3E-08 1.8E-12 63.7 10.9 56 173-231 163-218 (230)
130 PF03959 FSH1: Serine hydrolas 98.9 1.4E-08 3E-13 69.5 7.7 46 173-219 161-207 (212)
131 PF12740 Chlorophyllase2: Chlo 98.9 4.1E-08 8.9E-13 67.8 9.8 82 1-83 39-131 (259)
132 PF11339 DUF3141: Protein of u 98.8 1.8E-07 3.8E-12 69.9 13.2 57 28-84 116-176 (581)
133 KOG1553 Predicted alpha/beta h 98.8 1.2E-08 2.7E-13 72.0 6.8 78 4-82 266-344 (517)
134 PRK04940 hypothetical protein; 98.8 3.4E-07 7.4E-12 59.7 12.7 53 175-232 126-179 (180)
135 PF07819 PGAP1: PGAP1-like pro 98.8 5E-08 1.1E-12 67.1 8.9 78 5-86 38-126 (225)
136 COG2936 Predicted acyl esteras 98.7 3.4E-07 7.4E-12 69.8 11.6 83 2-84 76-160 (563)
137 KOG1515 Arylacetamide deacetyl 98.7 3.1E-06 6.8E-11 61.4 16.0 192 4-233 121-335 (336)
138 COG0657 Aes Esterase/lipase [L 98.7 8.4E-07 1.8E-11 64.7 12.7 80 3-86 107-194 (312)
139 KOG1551 Uncharacterized conser 98.7 1.6E-07 3.4E-12 64.0 7.8 56 176-232 309-365 (371)
140 PF00450 Peptidase_S10: Serine 98.7 1.6E-06 3.5E-11 65.9 14.1 79 6-84 85-182 (415)
141 PF08386 Abhydrolase_4: TAP-li 98.7 1.5E-07 3.3E-12 56.3 6.9 60 173-232 34-93 (103)
142 PF12715 Abhydrolase_7: Abhydr 98.6 1.4E-07 3E-12 68.4 6.4 79 2-81 156-258 (390)
143 PF07224 Chlorophyllase: Chlor 98.6 1E-06 2.2E-11 60.3 9.6 82 2-84 69-158 (307)
144 PRK10439 enterobactin/ferric e 98.5 6E-06 1.3E-10 62.1 13.6 52 32-83 268-323 (411)
145 PF10142 PhoPQ_related: PhoPQ- 98.5 1.8E-06 4E-11 63.1 10.5 149 46-232 170-319 (367)
146 KOG4840 Predicted hydrolases o 98.5 1.5E-06 3.4E-11 57.8 8.4 79 2-84 62-145 (299)
147 PF05677 DUF818: Chlamydia CHL 98.5 7.2E-07 1.6E-11 63.5 6.7 61 5-69 170-236 (365)
148 KOG2112 Lysophospholipase [Lip 98.5 1.6E-06 3.4E-11 57.3 7.7 126 28-227 69-202 (206)
149 PF00151 Lipase: Lipase; Inte 98.4 1.3E-07 2.8E-12 68.7 2.4 82 5-87 103-191 (331)
150 COG4188 Predicted dienelactone 98.4 1.8E-07 3.9E-12 67.3 3.0 51 172-222 250-303 (365)
151 PF05705 DUF829: Eukaryotic pr 98.4 1.9E-05 4E-10 55.4 12.3 58 173-230 178-240 (240)
152 KOG3253 Predicted alpha/beta h 98.4 4.1E-06 8.8E-11 63.9 8.8 45 173-217 304-349 (784)
153 PF04301 DUF452: Protein of un 98.4 6.5E-06 1.4E-10 55.5 8.9 37 177-216 169-205 (213)
154 PF05990 DUF900: Alpha/beta hy 98.3 3.2E-06 6.9E-11 58.7 7.1 77 8-84 50-138 (233)
155 PF05577 Peptidase_S28: Serine 98.3 4.2E-06 9.2E-11 63.9 8.2 79 6-84 59-149 (434)
156 COG4814 Uncharacterized protei 98.2 8.2E-05 1.8E-09 50.9 11.1 56 29-84 114-177 (288)
157 PF02450 LCAT: Lecithin:choles 98.1 6.5E-06 1.4E-10 61.7 6.2 57 30-86 99-163 (389)
158 cd00741 Lipase Lipase. Lipase 98.1 1.3E-05 2.9E-10 52.0 6.4 54 32-85 9-69 (153)
159 PF00756 Esterase: Putative es 98.1 9.3E-06 2E-10 57.4 5.2 53 32-84 97-151 (251)
160 PF03403 PAF-AH_p_II: Platelet 98.0 8.6E-06 1.9E-10 60.7 5.0 35 48-83 228-262 (379)
161 COG1770 PtrB Protease II [Amin 98.0 0.00014 3E-09 56.5 10.8 84 2-85 473-564 (682)
162 COG1073 Hydrolases of the alph 98.0 4.5E-06 9.8E-11 60.3 2.2 60 174-233 233-297 (299)
163 COG3150 Predicted esterase [Ge 97.9 0.00053 1.1E-08 44.0 10.8 53 28-84 40-92 (191)
164 COG1075 LipA Predicted acetylt 97.9 2.9E-05 6.3E-10 57.1 5.9 73 9-85 92-166 (336)
165 PF01674 Lipase_2: Lipase (cla 97.9 5.8E-06 1.3E-10 56.4 2.1 76 2-80 25-106 (219)
166 COG4099 Predicted peptidase [G 97.9 8.7E-05 1.9E-09 52.1 7.7 37 46-82 267-303 (387)
167 PF01764 Lipase_3: Lipase (cla 97.9 4E-05 8.6E-10 48.9 5.6 37 32-69 49-85 (140)
168 KOG3724 Negative regulator of 97.8 8.6E-05 1.9E-09 58.8 6.7 75 6-84 132-221 (973)
169 COG2819 Predicted hydrolase of 97.8 6.3E-05 1.4E-09 52.2 5.2 52 35-86 122-175 (264)
170 COG4782 Uncharacterized protei 97.8 0.00013 2.8E-09 52.7 6.8 77 7-83 147-234 (377)
171 COG4553 DepA Poly-beta-hydroxy 97.7 0.0025 5.4E-08 44.9 11.9 76 7-85 131-211 (415)
172 PF11187 DUF2974: Protein of u 97.7 0.00024 5.2E-09 48.9 6.6 38 47-84 83-124 (224)
173 cd00519 Lipase_3 Lipase (class 97.6 0.00014 3E-09 50.7 5.1 24 46-69 126-149 (229)
174 PLN02517 phosphatidylcholine-s 97.6 0.00011 2.5E-09 56.7 4.7 55 31-85 193-265 (642)
175 PF06259 Abhydrolase_8: Alpha/ 97.6 0.00038 8.2E-09 45.9 6.2 55 30-84 87-145 (177)
176 KOG2183 Prolylcarboxypeptidase 97.5 0.00021 4.5E-09 52.5 5.3 77 6-82 111-201 (492)
177 PF10340 DUF2424: Protein of u 97.5 0.0089 1.9E-07 44.3 13.6 79 7-86 155-238 (374)
178 PLN02606 palmitoyl-protein thi 97.5 0.0017 3.7E-08 46.4 9.4 55 29-83 75-132 (306)
179 PF11288 DUF3089: Protein of u 97.5 0.00033 7.2E-09 47.1 5.3 41 29-69 76-116 (207)
180 PF05057 DUF676: Putative seri 97.5 0.0003 6.5E-09 48.5 5.1 39 29-67 54-97 (217)
181 PLN02162 triacylglycerol lipas 97.5 0.00047 1E-08 51.9 6.3 34 33-67 264-297 (475)
182 KOG2237 Predicted serine prote 97.4 0.0022 4.7E-08 50.1 9.7 83 2-84 495-585 (712)
183 PLN00413 triacylglycerol lipas 97.4 0.00075 1.6E-08 51.0 6.6 35 32-67 269-303 (479)
184 PLN02454 triacylglycerol lipas 97.3 0.00082 1.8E-08 50.1 5.8 32 36-68 215-248 (414)
185 PF12048 DUF3530: Protein of u 97.3 0.0041 9E-08 45.3 9.2 41 46-86 191-232 (310)
186 KOG3101 Esterase D [General fu 97.3 9.4E-05 2E-09 49.2 0.7 39 46-84 139-177 (283)
187 COG0627 Predicted esterase [Ge 97.3 0.00046 1E-08 50.0 4.3 59 28-86 127-190 (316)
188 PF05277 DUF726: Protein of un 97.2 0.001 2.2E-08 48.7 5.9 42 45-86 217-263 (345)
189 PLN02571 triacylglycerol lipas 97.2 0.00059 1.3E-08 50.9 4.7 38 31-68 208-246 (413)
190 PF01083 Cutinase: Cutinase; 97.2 0.0014 3E-08 43.6 5.9 49 35-84 69-123 (179)
191 COG3509 LpqC Poly(3-hydroxybut 97.2 0.0051 1.1E-07 43.6 8.7 80 4-83 89-179 (312)
192 KOG2182 Hydrolytic enzymes of 97.2 0.0016 3.4E-08 49.3 6.6 79 5-83 117-207 (514)
193 PF11144 DUF2920: Protein of u 97.2 0.02 4.4E-07 42.7 12.0 36 48-83 184-219 (403)
194 KOG2369 Lecithin:cholesterol a 97.1 0.0007 1.5E-08 50.8 3.7 53 31-83 162-225 (473)
195 PLN02408 phospholipase A1 97.0 0.0014 3.1E-08 48.2 4.8 36 34-69 185-221 (365)
196 PLN02934 triacylglycerol lipas 97.0 0.0015 3.3E-08 49.8 4.9 34 33-67 307-340 (515)
197 KOG3967 Uncharacterized conser 96.9 0.0085 1.8E-07 40.3 7.3 79 4-83 142-227 (297)
198 COG3946 VirJ Type IV secretory 96.9 0.0013 2.8E-08 48.4 3.9 64 2-71 283-349 (456)
199 KOG3847 Phospholipase A2 (plat 96.9 0.0048 1E-07 44.1 6.3 35 48-83 241-275 (399)
200 PLN02324 triacylglycerol lipas 96.9 0.0021 4.6E-08 48.0 4.8 36 33-68 199-235 (415)
201 PLN02310 triacylglycerol lipas 96.9 0.0041 8.9E-08 46.5 6.3 36 33-68 191-229 (405)
202 COG2382 Fes Enterochelin ester 96.8 0.0026 5.7E-08 45.1 4.6 38 47-84 176-213 (299)
203 cd00312 Esterase_lipase Estera 96.8 0.0031 6.7E-08 49.4 5.4 79 6-84 125-214 (493)
204 PLN02802 triacylglycerol lipas 96.8 0.0029 6.3E-08 48.4 4.8 37 33-69 314-351 (509)
205 PLN03037 lipase class 3 family 96.7 0.0027 5.8E-08 48.7 4.5 36 33-68 300-338 (525)
206 COG4287 PqaA PhoPQ-activated p 96.7 0.0074 1.6E-07 44.1 6.4 58 173-233 329-387 (507)
207 PLN02213 sinapoylglucose-malat 96.7 0.0089 1.9E-07 43.9 7.0 59 173-232 233-316 (319)
208 PLN02753 triacylglycerol lipas 96.6 0.004 8.6E-08 47.9 4.8 36 33-68 293-332 (531)
209 PF07082 DUF1350: Protein of u 96.6 0.0054 1.2E-07 42.4 5.0 34 48-81 90-123 (250)
210 PLN02213 sinapoylglucose-malat 96.5 0.0097 2.1E-07 43.8 6.2 77 7-83 2-96 (319)
211 PLN02719 triacylglycerol lipas 96.5 0.0052 1.1E-07 47.1 4.7 36 33-68 279-318 (518)
212 PLN02633 palmitoyl protein thi 96.4 0.02 4.3E-07 41.2 6.9 56 28-83 73-131 (314)
213 PLN02761 lipase class 3 family 96.4 0.0065 1.4E-07 46.7 4.6 35 33-67 274-313 (527)
214 PLN02209 serine carboxypeptida 96.3 0.016 3.4E-07 44.5 6.3 59 173-232 351-434 (437)
215 PLN03016 sinapoylglucose-malat 96.3 0.018 4E-07 44.1 6.4 59 173-232 347-430 (433)
216 KOG1282 Serine carboxypeptidas 96.2 0.013 2.9E-07 44.7 5.6 59 174-232 364-447 (454)
217 PLN02847 triacylglycerol lipas 96.2 0.0099 2.2E-07 46.5 4.9 23 46-68 249-271 (633)
218 KOG4569 Predicted lipase [Lipi 96.2 0.0094 2E-07 44.1 4.6 37 31-68 155-191 (336)
219 PF06850 PHB_depo_C: PHB de-po 96.2 0.016 3.4E-07 38.6 5.1 61 173-233 134-202 (202)
220 PF07519 Tannase: Tannase and 96.2 0.027 5.8E-07 43.8 7.1 81 3-84 56-151 (474)
221 KOG2029 Uncharacterized conser 96.1 0.019 4.2E-07 44.7 5.8 55 29-83 505-572 (697)
222 COG1505 Serine proteases of th 96.1 0.012 2.6E-07 45.9 4.6 80 3-82 447-534 (648)
223 KOG2521 Uncharacterized conser 96.0 0.12 2.6E-06 38.2 9.3 61 173-233 225-290 (350)
224 COG2272 PnbA Carboxylesterase 95.8 0.01 2.2E-07 45.3 3.3 81 2-84 120-218 (491)
225 PF02089 Palm_thioest: Palmito 95.8 0.0092 2E-07 42.3 2.8 55 29-83 60-116 (279)
226 COG2939 Carboxypeptidase C (ca 95.8 0.023 5E-07 43.5 4.9 79 8-86 148-239 (498)
227 PLN02209 serine carboxypeptida 95.5 0.049 1.1E-06 41.9 6.0 77 7-83 118-212 (437)
228 PF08237 PE-PPE: PE-PPE domain 95.4 0.13 2.8E-06 35.7 7.3 77 6-82 2-88 (225)
229 PLN03016 sinapoylglucose-malat 95.4 0.051 1.1E-06 41.7 5.8 77 7-83 116-210 (433)
230 KOG1202 Animal-type fatty acid 95.4 0.052 1.1E-06 46.3 6.0 71 13-83 2147-2219(2376)
231 COG2830 Uncharacterized protei 95.3 0.024 5.2E-07 36.4 3.2 35 47-83 56-90 (214)
232 KOG4540 Putative lipase essent 94.9 0.063 1.4E-06 38.1 4.5 30 41-70 269-298 (425)
233 COG5153 CVT17 Putative lipase 94.9 0.063 1.4E-06 38.1 4.5 30 41-70 269-298 (425)
234 KOG2385 Uncharacterized conser 94.7 0.077 1.7E-06 40.8 4.9 45 45-89 444-493 (633)
235 KOG2541 Palmitoyl protein thio 94.4 0.36 7.7E-06 34.2 7.2 74 6-83 53-128 (296)
236 COG4947 Uncharacterized protei 93.9 0.064 1.4E-06 35.0 2.7 37 47-83 100-136 (227)
237 PF00135 COesterase: Carboxyle 93.7 0.079 1.7E-06 42.1 3.5 80 4-83 154-245 (535)
238 KOG1283 Serine carboxypeptidas 93.6 0.16 3.4E-06 36.9 4.3 76 8-83 73-166 (414)
239 PF09949 DUF2183: Uncharacteri 92.3 0.98 2.1E-05 26.9 5.9 46 32-78 50-97 (100)
240 PF05576 Peptidase_S37: PS-10 91.3 0.083 1.8E-06 39.7 0.7 75 8-82 90-168 (448)
241 KOG1516 Carboxylesterase and r 88.0 2.7 5.9E-05 33.8 6.9 56 28-83 171-232 (545)
242 PF00698 Acyl_transf_1: Acyl t 87.4 0.58 1.3E-05 34.6 2.7 30 37-67 74-103 (318)
243 COG2939 Carboxypeptidase C (ca 87.4 0.74 1.6E-05 35.8 3.2 59 173-232 425-490 (498)
244 cd07225 Pat_PNPLA6_PNPLA7 Pata 87.1 1.2 2.7E-05 32.7 4.2 32 37-69 33-64 (306)
245 smart00827 PKS_AT Acyl transfe 86.3 1.2 2.6E-05 32.5 3.8 29 38-67 73-101 (298)
246 KOG1282 Serine carboxypeptidas 86.3 2 4.4E-05 33.4 5.1 78 7-84 118-214 (454)
247 TIGR03131 malonate_mdcH malona 85.9 1.3 2.9E-05 32.3 3.9 29 38-67 67-95 (295)
248 PRK10279 hypothetical protein; 85.5 1.6 3.4E-05 32.0 4.0 33 37-70 23-55 (300)
249 cd07198 Patatin Patatin-like p 84.9 2 4.4E-05 28.5 4.1 31 39-70 18-48 (172)
250 cd07207 Pat_ExoU_VipD_like Exo 84.6 2 4.4E-05 29.0 4.1 30 39-69 19-48 (194)
251 TIGR03712 acc_sec_asp2 accesso 84.5 18 0.00039 28.6 11.1 37 33-69 341-378 (511)
252 cd07227 Pat_Fungal_NTE1 Fungal 84.4 2.1 4.5E-05 30.9 4.1 32 37-69 28-59 (269)
253 TIGR00128 fabD malonyl CoA-acy 83.6 1.8 3.8E-05 31.5 3.7 29 40-68 75-103 (290)
254 cd01714 ETF_beta The electron 83.6 4.9 0.00011 27.6 5.5 51 27-79 90-145 (202)
255 PF07519 Tannase: Tannase and 83.2 2 4.3E-05 33.8 3.9 60 173-232 353-426 (474)
256 KOG4372 Predicted alpha/beta h 83.1 0.54 1.2E-05 35.4 0.8 32 33-65 136-167 (405)
257 COG1752 RssA Predicted esteras 83.1 2.2 4.8E-05 31.4 4.0 32 37-69 29-60 (306)
258 cd07210 Pat_hypo_W_succinogene 82.8 2.9 6.3E-05 29.1 4.2 31 39-70 20-50 (221)
259 PF10081 Abhydrolase_9: Alpha/ 81.9 3.8 8.3E-05 29.5 4.5 52 33-84 92-148 (289)
260 COG0218 Predicted GTPase [Gene 81.9 2.3 5.1E-05 28.9 3.3 56 173-232 135-198 (200)
261 cd07228 Pat_NTE_like_bacteria 80.4 3.6 7.8E-05 27.4 3.9 30 40-70 21-50 (175)
262 PF09994 DUF2235: Uncharacteri 79.5 4.4 9.5E-05 29.4 4.4 40 29-68 72-112 (277)
263 cd07209 Pat_hypo_Ecoli_Z1214_l 79.4 4 8.7E-05 28.3 4.0 32 38-70 17-48 (215)
264 PF14253 AbiH: Bacteriophage a 79.1 2.4 5.2E-05 30.5 3.0 20 41-60 228-247 (270)
265 TIGR02816 pfaB_fam PfaB family 77.7 3.6 7.7E-05 33.0 3.7 30 39-69 256-286 (538)
266 cd07205 Pat_PNPLA6_PNPLA7_NTE1 77.0 6 0.00013 26.3 4.2 30 39-69 20-49 (175)
267 cd07230 Pat_TGL4-5_like Triacy 76.5 2.6 5.5E-05 32.7 2.6 28 46-73 99-126 (421)
268 PF11713 Peptidase_C80: Peptid 74.4 2.1 4.6E-05 28.0 1.5 48 13-60 60-116 (157)
269 PF05576 Peptidase_S37: PS-10 73.9 3.3 7.2E-05 31.6 2.5 57 173-231 351-412 (448)
270 cd07232 Pat_PLPL Patain-like p 73.8 2.7 6E-05 32.3 2.2 31 46-76 93-123 (407)
271 cd07208 Pat_hypo_Ecoli_yjju_li 73.4 7.8 0.00017 27.9 4.3 26 46-71 24-50 (266)
272 cd07229 Pat_TGL3_like Triacylg 73.2 3.2 6.8E-05 31.7 2.3 31 46-76 109-139 (391)
273 PF03283 PAE: Pectinacetyleste 72.7 14 0.00031 28.1 5.6 44 39-82 146-194 (361)
274 cd07231 Pat_SDP1-like Sugar-De 72.2 3.9 8.4E-05 30.2 2.5 27 46-72 94-120 (323)
275 PF00448 SRP54: SRP54-type pro 71.7 25 0.00053 24.1 6.1 66 4-79 81-148 (196)
276 cd07212 Pat_PNPLA9 Patatin-lik 70.8 9.3 0.0002 28.3 4.2 21 50-70 34-54 (312)
277 cd07224 Pat_like Patatin-like 67.8 12 0.00027 26.3 4.2 22 49-70 30-51 (233)
278 PF02590 SPOUT_MTase: Predicte 66.9 14 0.0003 24.2 4.0 45 5-59 66-110 (155)
279 PF08484 Methyltransf_14: C-me 66.5 14 0.00031 24.3 4.0 47 35-81 55-102 (160)
280 COG0331 FabD (acyl-carrier-pro 66.1 8.8 0.00019 28.4 3.3 22 46-67 83-104 (310)
281 COG3673 Uncharacterized conser 65.9 19 0.00042 26.8 4.8 28 41-68 115-142 (423)
282 PF10605 3HBOH: 3HB-oligomer h 65.2 9.8 0.00021 30.8 3.5 34 50-83 287-321 (690)
283 PF03681 UPF0150: Uncharacteri 64.9 8.3 0.00018 19.1 2.2 34 4-43 11-44 (48)
284 cd07206 Pat_TGL3-4-5_SDP1 Tria 64.7 13 0.00027 27.4 3.8 28 46-73 95-122 (298)
285 COG3887 Predicted signaling pr 63.1 23 0.00049 28.8 5.0 49 33-82 322-377 (655)
286 COG1576 Uncharacterized conser 62.9 31 0.00066 22.6 4.8 50 5-65 66-115 (155)
287 cd07204 Pat_PNPLA_like Patatin 62.0 18 0.00039 25.7 4.2 21 50-70 33-53 (243)
288 PRK12467 peptide synthase; Pro 60.2 54 0.0012 34.1 8.0 75 6-83 3718-3795(3956)
289 PRK06731 flhF flagellar biosyn 59.5 66 0.0014 23.4 7.2 65 5-79 153-219 (270)
290 PF09419 PGP_phosphatase: Mito 59.3 51 0.0011 22.0 5.7 53 2-58 36-88 (168)
291 cd07218 Pat_iPLA2 Calcium-inde 58.2 22 0.00047 25.4 4.0 21 50-70 32-52 (245)
292 PRK14974 cell division protein 57.8 57 0.0012 24.7 6.2 66 4-79 220-287 (336)
293 COG2240 PdxK Pyridoxal/pyridox 57.3 24 0.00052 25.7 4.1 82 4-87 26-117 (281)
294 PRK00103 rRNA large subunit me 57.3 43 0.00092 22.1 4.9 30 28-58 80-109 (157)
295 cd07221 Pat_PNPLA3 Patatin-lik 57.0 24 0.00052 25.3 4.1 22 49-70 33-54 (252)
296 TIGR01425 SRP54_euk signal rec 56.9 44 0.00095 26.3 5.6 65 5-79 181-247 (429)
297 cd07217 Pat17_PNPLA8_PNPLA9_li 55.8 12 0.00025 28.3 2.5 19 51-69 44-62 (344)
298 cd07220 Pat_PNPLA2 Patatin-lik 55.5 26 0.00055 25.1 4.0 22 49-70 37-58 (249)
299 cd01819 Patatin_and_cPLA2 Pata 55.3 28 0.00061 22.7 4.0 19 48-66 28-46 (155)
300 COG0541 Ffh Signal recognition 55.2 77 0.0017 25.0 6.5 67 4-80 180-248 (451)
301 PF12242 Eno-Rase_NADH_b: NAD( 54.6 38 0.00082 19.1 4.9 41 30-70 19-62 (78)
302 PF06792 UPF0261: Uncharacteri 52.3 56 0.0012 25.4 5.4 78 2-79 24-126 (403)
303 KOG4231 Intracellular membrane 52.1 23 0.00049 28.2 3.4 53 4-69 414-471 (763)
304 TIGR00246 tRNA_RlmH_YbeA rRNA 51.9 38 0.00083 22.2 4.1 12 29-40 79-90 (153)
305 cd07213 Pat17_PNPLA8_PNPLA9_li 51.7 14 0.00031 27.0 2.4 20 50-69 36-55 (288)
306 cd07211 Pat_PNPLA8 Patatin-lik 51.6 14 0.00029 27.4 2.3 17 51-67 44-60 (308)
307 cd07222 Pat_PNPLA4 Patatin-lik 50.9 31 0.00067 24.6 3.9 18 50-67 33-50 (246)
308 COG2230 Cfa Cyclopropane fatty 50.3 65 0.0014 23.7 5.3 46 33-79 57-104 (283)
309 PRK04148 hypothetical protein; 50.2 39 0.00084 21.6 3.8 31 46-80 16-46 (134)
310 PF15566 Imm18: Immunity prote 49.5 26 0.00056 18.0 2.3 30 30-60 4-33 (52)
311 PF03490 Varsurf_PPLC: Variant 49.3 21 0.00046 18.0 2.0 26 28-54 6-31 (51)
312 PF05577 Peptidase_S28: Serine 49.2 15 0.00032 28.8 2.2 41 174-217 377-417 (434)
313 PF06289 FlbD: Flagellar prote 49.1 41 0.00089 17.9 3.7 34 198-232 24-57 (60)
314 PF01341 Glyco_hydro_6: Glycos 48.5 32 0.00069 25.4 3.6 45 8-53 64-113 (298)
315 cd08769 DAP_dppA_2 Peptidase M 48.5 85 0.0018 22.9 5.6 51 173-229 147-199 (270)
316 PLN02752 [acyl-carrier protein 47.8 17 0.00036 27.4 2.3 19 50-68 126-144 (343)
317 PF15660 Imm49: Immunity prote 47.8 26 0.00056 18.6 2.3 18 27-44 63-80 (84)
318 COG0421 SpeE Spermidine syntha 47.7 84 0.0018 23.1 5.6 33 46-81 76-108 (282)
319 PF06833 MdcE: Malonate decarb 47.6 46 0.00099 23.6 4.1 58 8-67 67-128 (234)
320 PLN00179 acyl- [acyl-carrier p 46.7 38 0.00083 25.8 3.8 62 12-76 288-362 (390)
321 PF01734 Patatin: Patatin-like 46.0 29 0.00062 23.0 3.1 23 46-68 25-47 (204)
322 cd01406 SIR2-like Sir2-like: P 45.9 28 0.0006 24.7 3.0 50 17-66 143-198 (242)
323 PRK13938 phosphoheptose isomer 45.8 70 0.0015 22.0 4.8 27 44-70 42-68 (196)
324 PRK06193 hypothetical protein; 45.1 41 0.0009 23.3 3.6 52 28-82 135-187 (206)
325 cd05007 SIS_Etherase N-acetylm 45.0 60 0.0013 23.4 4.6 37 35-71 37-73 (257)
326 TIGR00521 coaBC_dfp phosphopan 44.6 97 0.0021 24.1 5.8 51 2-55 138-193 (390)
327 KOG1283 Serine carboxypeptidas 44.4 30 0.00066 25.8 3.0 58 173-230 325-411 (414)
328 TIGR03607 patatin-related prot 44.2 36 0.00077 28.8 3.7 22 46-67 64-85 (739)
329 PRK05441 murQ N-acetylmuramic 43.5 65 0.0014 23.9 4.6 34 37-70 52-85 (299)
330 PF00091 Tubulin: Tubulin/FtsZ 43.3 76 0.0016 22.1 4.8 25 37-62 114-138 (216)
331 PRK05665 amidotransferase; Pro 43.2 50 0.0011 23.5 3.9 38 28-66 71-108 (240)
332 cd07216 Pat17_PNPLA8_PNPLA9_li 42.8 18 0.00039 26.8 1.8 17 51-67 45-61 (309)
333 PF03405 FA_desaturase_2: Fatt 42.7 26 0.00056 26.3 2.5 62 12-76 231-305 (330)
334 COG1926 Predicted phosphoribos 42.7 1E+02 0.0023 21.5 5.1 47 31-77 8-55 (220)
335 PRK07877 hypothetical protein; 42.6 52 0.0011 27.9 4.4 34 46-81 106-139 (722)
336 PF12641 Flavodoxin_3: Flavodo 42.3 1E+02 0.0022 20.4 5.1 59 173-231 39-97 (160)
337 COG3621 Patatin [General funct 42.1 92 0.002 23.5 5.0 39 32-70 22-64 (394)
338 PF08197 TT_ORF2a: pORF2a trun 41.9 23 0.0005 17.2 1.4 13 8-20 36-48 (49)
339 COG0069 GltB Glutamate synthas 41.8 1.9E+02 0.004 23.4 7.2 71 15-90 271-344 (485)
340 TIGR02813 omega_3_PfaA polyket 41.7 33 0.00072 33.8 3.5 27 39-66 666-692 (2582)
341 COG1087 GalE UDP-glucose 4-epi 41.6 71 0.0015 23.8 4.4 79 2-83 20-120 (329)
342 cd08770 DAP_dppA_3 Peptidase M 40.7 1.2E+02 0.0025 22.2 5.3 52 173-230 147-199 (263)
343 TIGR03127 RuMP_HxlB 6-phospho 40.6 63 0.0014 21.5 4.0 33 37-69 20-52 (179)
344 COG1092 Predicted SAM-dependen 40.4 78 0.0017 24.6 4.7 52 6-60 290-341 (393)
345 cd06143 PAN2_exo DEDDh 3'-5' e 40.3 32 0.00069 23.1 2.4 14 47-60 100-113 (174)
346 COG1598 Predicted nuclease of 40.2 67 0.0015 17.8 3.8 33 4-42 13-45 (73)
347 cd07199 Pat17_PNPLA8_PNPLA9_li 39.6 26 0.00057 25.1 2.1 18 51-68 37-54 (258)
348 TIGR02354 thiF_fam2 thiamine b 39.3 84 0.0018 21.6 4.4 40 39-82 14-54 (200)
349 cd08663 DAP_dppA_1 Peptidase M 38.9 1.4E+02 0.0029 21.9 5.5 52 173-230 147-200 (266)
350 PF10561 UPF0565: Uncharacteri 38.0 61 0.0013 24.1 3.7 21 47-67 192-212 (303)
351 PRK02399 hypothetical protein; 37.9 1.4E+02 0.0031 23.4 5.6 48 31-78 77-127 (406)
352 cd07214 Pat17_isozyme_like Pat 37.4 27 0.00058 26.5 2.0 18 51-68 46-63 (349)
353 PF04548 AIG1: AIG1 family; I 37.3 72 0.0016 22.1 4.0 48 5-58 47-94 (212)
354 PF04951 Peptidase_M55: D-amin 37.2 96 0.0021 22.6 4.5 52 173-230 147-200 (265)
355 PF01118 Semialdhyde_dh: Semia 37.1 45 0.00097 20.6 2.7 31 49-80 1-32 (121)
356 cd00281 DAP_dppA Peptidase M55 36.6 1.6E+02 0.0034 21.6 5.4 52 173-230 146-199 (265)
357 PRK14046 malate--CoA ligase su 36.6 32 0.0007 26.6 2.3 32 47-78 118-149 (392)
358 cd07215 Pat17_PNPLA8_PNPLA9_li 36.5 29 0.00062 26.1 2.0 17 51-67 43-59 (329)
359 TIGR01120 rpiB ribose 5-phosph 36.0 1.2E+02 0.0027 19.6 4.6 41 28-71 39-79 (143)
360 TIGR00959 ffh signal recogniti 35.8 2.1E+02 0.0045 22.7 6.4 66 4-79 180-247 (428)
361 COG4667 Predicted esterase of 35.7 48 0.001 24.1 2.8 38 38-77 31-69 (292)
362 cd05005 SIS_PHI Hexulose-6-pho 35.2 81 0.0018 21.1 3.9 33 37-69 23-55 (179)
363 KOG2248 3'-5' exonuclease [Rep 35.0 44 0.00096 25.7 2.7 45 33-80 279-324 (380)
364 PRK15416 lipopolysaccharide co 35.0 53 0.0011 22.7 2.9 23 37-60 142-164 (201)
365 KOG2214 Predicted esterase of 35.0 24 0.00052 28.0 1.4 32 46-77 200-231 (543)
366 COG2201 CheB Chemotaxis respon 34.5 77 0.0017 24.1 3.8 34 48-81 157-191 (350)
367 PF00070 Pyr_redox: Pyridine n 34.5 69 0.0015 17.8 3.0 31 49-82 1-31 (80)
368 cd00842 MPP_ASMase acid sphing 34.5 1.1E+02 0.0024 22.5 4.7 52 4-55 167-221 (296)
369 TIGR00689 rpiB_lacA_lacB sugar 33.9 1.4E+02 0.0029 19.5 4.7 59 2-71 20-78 (144)
370 PLN02925 4-hydroxy-3-methylbut 33.9 96 0.0021 26.2 4.5 39 9-54 632-670 (733)
371 PF01751 Toprim: Toprim domain 33.7 1E+02 0.0023 18.1 4.6 34 189-222 8-41 (100)
372 KOG3086 Predicted dioxygenase 33.2 1.6E+02 0.0034 21.3 4.8 57 28-84 17-80 (296)
373 PLN02733 phosphatidylcholine-s 33.2 30 0.00064 27.3 1.7 51 177-231 370-420 (440)
374 COG0813 DeoD Purine-nucleoside 33.1 1.5E+02 0.0033 20.9 4.7 37 46-84 54-94 (236)
375 PF02353 CMAS: Mycolic acid cy 33.1 75 0.0016 23.2 3.6 48 29-77 42-92 (273)
376 TIGR03169 Nterm_to_SelD pyridi 32.9 64 0.0014 24.5 3.4 34 49-82 1-34 (364)
377 KOG2486 Predicted GTPase [Gene 32.9 1.3E+02 0.0029 22.2 4.6 19 6-24 182-200 (320)
378 PRK05571 ribose-5-phosphate is 32.9 1.4E+02 0.0031 19.5 4.5 49 28-80 41-89 (148)
379 KOG0781 Signal recognition par 32.9 1.6E+02 0.0034 23.8 5.2 51 4-64 464-514 (587)
380 PRK01710 murD UDP-N-acetylmura 32.8 96 0.0021 24.6 4.4 34 35-69 3-36 (458)
381 cd07219 Pat_PNPLA1 Patatin-lik 32.7 85 0.0018 24.3 3.8 19 50-68 46-64 (382)
382 PF13709 DUF4159: Domain of un 32.6 1.7E+02 0.0037 20.3 5.2 38 173-210 53-90 (207)
383 cd01852 AIG1 AIG1 (avrRpt2-ind 32.6 1.6E+02 0.0035 19.9 5.6 17 5-21 47-63 (196)
384 PRK11889 flhF flagellar biosyn 32.4 2.6E+02 0.0055 22.2 7.0 65 5-79 319-385 (436)
385 PF14987 NADHdh_A3: NADH dehyd 32.4 78 0.0017 17.9 2.7 29 35-63 3-31 (84)
386 COG3007 Uncharacterized paraqu 32.2 1.4E+02 0.003 22.3 4.6 43 28-70 18-64 (398)
387 PRK13512 coenzyme A disulfide 31.9 97 0.0021 24.4 4.3 41 37-81 139-179 (438)
388 PRK05579 bifunctional phosphop 31.7 2.4E+02 0.0053 22.1 6.2 50 2-55 142-196 (399)
389 PRK06490 glutamine amidotransf 31.5 83 0.0018 22.4 3.6 35 30-65 68-102 (239)
390 PF01715 IPPT: IPP transferase 31.5 55 0.0012 23.5 2.7 30 25-54 33-63 (253)
391 cd01820 PAF_acetylesterase_lik 31.3 85 0.0018 21.6 3.6 40 21-60 5-45 (214)
392 COG3675 Predicted lipase [Lipi 31.3 32 0.0007 25.2 1.5 32 36-67 163-194 (332)
393 PF06956 RtcR: Regulator of RN 31.2 1.1E+02 0.0024 20.6 3.7 53 176-233 43-98 (183)
394 COG1103 Archaea-specific pyrid 31.0 1.3E+02 0.0028 22.1 4.3 41 191-231 111-151 (382)
395 PF00862 Sucrose_synth: Sucros 30.9 89 0.0019 25.3 3.8 39 29-68 382-422 (550)
396 KOG0736 Peroxisome assembly fa 30.9 1.9E+02 0.0041 25.1 5.6 71 8-82 766-843 (953)
397 TIGR01118 lacA galactose-6-pho 30.7 1.4E+02 0.0029 19.4 4.0 51 2-62 22-72 (141)
398 PRK13936 phosphoheptose isomer 30.6 1.5E+02 0.0031 20.4 4.5 26 45-70 41-66 (197)
399 KOG0780 Signal recognition par 30.4 2.3E+02 0.005 22.3 5.6 58 2-69 179-236 (483)
400 KOG1387 Glycosyltransferase [C 30.4 22 0.00048 26.8 0.6 26 46-71 125-151 (465)
401 KOG4388 Hormone-sensitive lipa 30.0 3.3E+02 0.0072 22.8 6.7 36 47-82 468-507 (880)
402 cd00382 beta_CA Carbonic anhyd 30.0 78 0.0017 19.6 2.9 29 33-62 45-73 (119)
403 PRK00865 glutamate racemase; P 29.6 1.5E+02 0.0032 21.5 4.6 50 175-227 7-57 (261)
404 cd03379 beta_CA_cladeD Carboni 29.5 85 0.0018 20.2 3.1 28 32-60 41-68 (142)
405 PF03575 Peptidase_S51: Peptid 29.4 27 0.00059 22.7 0.8 12 50-61 70-81 (154)
406 cd03131 GATase1_HTS Type 1 glu 29.0 20 0.00044 24.0 0.2 36 33-69 83-118 (175)
407 COG4813 ThuA Trehalose utiliza 28.9 1.1E+02 0.0024 20.9 3.4 45 169-214 59-105 (261)
408 KOG2541 Palmitoyl protein thio 28.5 1.7E+02 0.0037 21.5 4.5 35 173-207 23-59 (296)
409 COG0084 TatD Mg-dependent DNas 28.3 2.3E+02 0.0049 20.6 5.2 50 31-81 13-65 (256)
410 TIGR00064 ftsY signal recognit 28.3 2.4E+02 0.0052 20.6 6.4 16 4-19 152-167 (272)
411 COG2885 OmpA Outer membrane pr 28.1 92 0.002 21.1 3.2 31 29-60 97-129 (190)
412 PRK10867 signal recognition pa 27.9 3.1E+02 0.0068 21.8 6.7 65 4-78 181-247 (433)
413 PF07279 DUF1442: Protein of u 27.8 1.1E+02 0.0024 21.5 3.4 44 36-81 28-77 (218)
414 PF13524 Glyco_trans_1_2: Glyc 27.6 99 0.0021 17.6 3.0 25 207-231 37-61 (92)
415 PF07812 TfuA: TfuA-like prote 27.6 99 0.0021 19.3 2.9 27 39-66 14-40 (120)
416 PF11009 DUF2847: Protein of u 27.4 1.5E+02 0.0033 18.0 4.0 34 34-68 7-40 (105)
417 COG4850 Uncharacterized conser 27.4 1.4E+02 0.0031 22.6 4.1 47 35-82 266-314 (373)
418 COG1582 FlgEa Uncharacterized 27.1 1.1E+02 0.0025 16.5 3.8 43 188-232 15-57 (67)
419 COG0796 MurI Glutamate racemas 27.0 2.1E+02 0.0045 21.0 4.8 46 173-221 5-50 (269)
420 PF02502 LacAB_rpiB: Ribose/Ga 27.0 1.8E+02 0.0039 18.8 4.2 41 28-71 39-79 (140)
421 PRK10886 DnaA initiator-associ 26.9 2E+02 0.0043 19.9 4.6 25 45-69 39-63 (196)
422 PRK09754 phenylpropionate diox 26.8 1.1E+02 0.0024 23.6 3.8 44 35-81 132-175 (396)
423 PF07521 RMMBL: RNA-metabolisi 26.8 88 0.0019 15.1 2.4 32 7-53 7-38 (43)
424 PRK11557 putative DNA-binding 26.6 1.4E+02 0.0031 21.6 4.2 33 37-69 118-150 (278)
425 COG2065 PyrR Pyrimidine operon 26.5 2.1E+02 0.0045 19.3 5.0 34 36-69 19-53 (179)
426 PRK12726 flagellar biosynthesi 26.4 3.3E+02 0.0071 21.5 7.5 65 5-79 284-350 (407)
427 PRK09065 glutamine amidotransf 26.3 97 0.0021 22.0 3.2 35 31-66 71-105 (237)
428 PF02972 Phycoerythr_ab: Phyco 26.3 57 0.0012 17.0 1.4 13 9-21 5-17 (57)
429 PF13289 SIR2_2: SIR2-like dom 26.3 1.4E+02 0.0031 18.7 3.8 22 39-60 78-99 (143)
430 PRK03363 fixB putative electro 26.2 2E+02 0.0043 21.7 4.8 41 28-69 62-103 (313)
431 PRK05368 homoserine O-succinyl 26.1 73 0.0016 23.7 2.6 32 36-68 123-154 (302)
432 KOG1336 Monodehydroascorbate/f 26.1 1.3E+02 0.0029 24.0 4.0 47 33-82 199-245 (478)
433 COG0518 GuaA GMP synthase - Gl 26.0 1.8E+02 0.0039 20.1 4.3 38 28-66 59-96 (198)
434 PRK04965 NADH:flavorubredoxin 25.9 1.3E+02 0.0028 23.0 4.0 43 36-81 130-172 (377)
435 PF00899 ThiF: ThiF family; I 25.9 1E+02 0.0022 19.4 3.0 32 48-82 3-35 (135)
436 PRK08644 thiamine biosynthesis 25.8 2.2E+02 0.0048 19.8 4.8 38 41-82 23-61 (212)
437 PRK08622 galactose-6-phosphate 25.8 2.2E+02 0.0047 19.2 4.6 41 28-71 40-80 (171)
438 cd01014 nicotinamidase_related 25.8 1.9E+02 0.0042 18.7 4.7 47 35-82 88-134 (155)
439 PRK07511 enoyl-CoA hydratase; 25.7 2.6E+02 0.0056 20.1 5.4 18 52-69 105-122 (260)
440 cd05009 SIS_GlmS_GlmD_2 SIS (S 25.6 1.4E+02 0.0029 19.0 3.6 33 37-69 3-35 (153)
441 PRK14194 bifunctional 5,10-met 25.5 1.6E+02 0.0035 22.0 4.2 35 34-68 143-182 (301)
442 PF10763 DUF2584: Protein of u 25.5 13 0.00027 21.0 -1.0 14 2-15 27-40 (80)
443 PHA02595 tk.4 hypothetical pro 25.4 53 0.0011 21.5 1.6 18 55-72 29-46 (154)
444 cd01985 ETF The electron trans 25.3 2.2E+02 0.0047 19.1 5.1 50 28-79 74-125 (181)
445 PRK13256 thiopurine S-methyltr 24.9 30 0.00066 24.3 0.5 13 2-14 61-73 (226)
446 cd01853 Toc34_like Toc34-like 24.8 1.5E+02 0.0032 21.4 3.9 17 5-21 77-93 (249)
447 cd01715 ETF_alpha The electron 24.6 1.6E+02 0.0034 19.5 3.8 50 28-79 66-117 (168)
448 PRK02048 4-hydroxy-3-methylbut 24.6 1.1E+02 0.0023 25.4 3.3 37 11-54 518-554 (611)
449 PF13580 SIS_2: SIS domain; PD 24.3 2E+02 0.0043 18.3 4.1 26 45-70 33-58 (138)
450 COG4026 Uncharacterized protei 23.8 2.7E+02 0.0059 19.7 4.7 54 175-230 59-116 (290)
451 PF10929 DUF2811: Protein of u 23.7 97 0.0021 16.3 2.0 18 216-233 4-21 (57)
452 TIGR02802 Pal_lipo peptidoglyc 23.6 1.7E+02 0.0037 17.3 3.5 26 30-56 15-40 (104)
453 PRK00414 gmhA phosphoheptose i 23.5 2.5E+02 0.0054 19.2 4.6 24 46-69 43-66 (192)
454 PRK12615 galactose-6-phosphate 23.4 2.4E+02 0.0053 19.0 4.5 41 28-71 40-80 (171)
455 PF04551 GcpE: GcpE protein; 23.4 51 0.0011 25.0 1.4 37 12-54 269-305 (359)
456 KOG2283 Clathrin coat dissocia 23.2 91 0.002 24.7 2.7 31 27-60 88-118 (434)
457 PF12083 DUF3560: Domain of un 23.1 83 0.0018 19.9 2.1 21 35-56 30-50 (126)
458 cd01410 SIRT7 SIRT7: Eukaryoti 23.1 1.4E+02 0.0031 20.7 3.4 35 47-81 156-190 (206)
459 PF07992 Pyr_redox_2: Pyridine 23.1 1E+02 0.0022 20.7 2.8 29 49-80 1-29 (201)
460 PF06107 DUF951: Bacterial pro 23.0 1E+02 0.0022 16.3 2.0 23 207-230 34-56 (57)
461 PLN00022 electron transfer fla 22.9 3.6E+02 0.0079 20.8 5.7 41 27-69 99-140 (356)
462 PLN02366 spermidine synthase 22.8 3.2E+02 0.0069 20.5 5.3 33 45-80 90-122 (308)
463 PF00625 Guanylate_kin: Guanyl 22.7 1.8E+02 0.0038 19.5 3.8 38 47-84 2-41 (183)
464 COG0482 TrmU Predicted tRNA(5- 22.6 1.3E+02 0.0028 23.1 3.3 40 2-44 23-62 (356)
465 COG2344 AT-rich DNA-binding pr 22.6 1.1E+02 0.0024 21.0 2.6 29 27-56 65-93 (211)
466 PRK10416 signal recognition pa 22.5 3.5E+02 0.0075 20.5 6.9 70 4-79 194-267 (318)
467 PLN02962 hydroxyacylglutathion 22.4 1.4E+02 0.0031 21.5 3.4 28 29-57 166-193 (251)
468 PF01494 FAD_binding_3: FAD bi 22.3 1.1E+02 0.0024 22.7 3.1 22 49-70 3-24 (356)
469 PF12165 DUF3594: Domain of un 22.2 1.5E+02 0.0032 18.7 2.9 31 30-60 18-49 (137)
470 cd02908 Macro_Appr_pase_like M 22.1 2.2E+02 0.0047 18.8 4.0 29 29-58 89-117 (165)
471 PRK12570 N-acetylmuramic acid- 22.1 2.3E+02 0.005 21.1 4.5 27 43-69 54-80 (296)
472 COG0373 HemA Glutamyl-tRNA red 22.1 3.6E+02 0.0077 21.4 5.5 40 28-68 159-200 (414)
473 PRK13255 thiopurine S-methyltr 22.1 40 0.00087 23.6 0.6 13 2-14 55-67 (218)
474 TIGR02356 adenyl_thiF thiazole 22.0 2.8E+02 0.006 19.1 4.9 37 42-82 17-54 (202)
475 KOG4389 Acetylcholinesterase/B 22.0 1.8E+02 0.0038 23.7 3.9 49 35-83 204-255 (601)
476 cd03146 GAT1_Peptidase_E Type 21.8 82 0.0018 21.9 2.1 17 48-64 113-129 (212)
477 PRK04457 spermidine synthase; 21.7 3.2E+02 0.007 19.8 6.4 46 32-80 52-97 (262)
478 PTZ00215 ribose 5-phosphate is 21.7 2.5E+02 0.0054 18.5 4.9 41 28-71 44-84 (151)
479 TIGR03840 TMPT_Se_Te thiopurin 21.7 43 0.00093 23.3 0.7 13 2-14 52-64 (213)
480 cd00883 beta_CA_cladeA Carboni 21.6 1.7E+02 0.0037 19.8 3.5 31 34-65 68-98 (182)
481 cd02006 TPP_Gcl Thiamine pyrop 21.5 1.8E+02 0.004 19.9 3.7 14 173-186 101-114 (202)
482 PF04198 Sugar-bind: Putative 21.5 2.5E+02 0.0053 20.3 4.5 47 29-77 34-80 (255)
483 PF00056 Ldh_1_N: lactate/mala 21.4 1.4E+02 0.0031 19.1 3.0 32 49-82 2-35 (141)
484 COG1252 Ndh NADH dehydrogenase 21.3 1.8E+02 0.0039 22.9 3.9 37 46-83 2-38 (405)
485 TIGR02690 resist_ArsH arsenica 21.3 2.2E+02 0.0047 20.1 4.0 11 5-15 56-66 (219)
486 PF03808 Glyco_tran_WecB: Glyc 21.2 2.4E+02 0.0052 18.8 4.1 33 174-208 49-81 (172)
487 COG0621 MiaB 2-methylthioadeni 21.1 2.5E+02 0.0054 22.4 4.6 43 9-60 161-203 (437)
488 PF14714 KH_dom-like: KH-domai 21.0 1.5E+02 0.0033 16.8 2.7 27 173-199 38-64 (80)
489 PRK08621 galactose-6-phosphate 21.0 2.4E+02 0.0051 18.4 3.8 51 2-62 22-72 (142)
490 PF10116 Host_attach: Protein 21.0 1.5E+02 0.0033 18.8 3.1 11 10-20 42-52 (138)
491 PRK11789 N-acetyl-anhydromuran 20.6 1.4E+02 0.0029 20.5 2.8 24 33-57 135-158 (185)
492 PF03848 TehB: Tellurite resis 20.6 36 0.00078 23.3 0.1 13 2-14 48-60 (192)
493 cd05013 SIS_RpiR RpiR-like pro 20.5 2.1E+02 0.0045 17.6 3.7 23 46-68 12-34 (139)
494 PRK00694 4-hydroxy-3-methylbut 20.5 1.4E+02 0.0029 24.7 3.1 37 11-54 510-546 (606)
495 PF03295 Pox_TAA1: Poxvirus tr 20.5 1.2E+02 0.0026 16.2 1.9 16 214-229 21-36 (63)
496 PRK13512 coenzyme A disulfide 20.4 1.6E+02 0.0035 23.2 3.6 33 48-81 2-34 (438)
497 PRK13937 phosphoheptose isomer 20.3 2.9E+02 0.0063 18.7 4.5 25 45-69 36-60 (188)
498 cd02013 TPP_Xsc_like Thiamine 20.2 1.8E+02 0.0039 19.9 3.5 21 211-231 144-164 (196)
499 PTZ00182 3-methyl-2-oxobutanat 20.2 2.7E+02 0.006 21.4 4.6 54 20-73 24-84 (355)
500 cd01080 NAD_bind_m-THF_DH_Cycl 20.2 2.1E+02 0.0045 19.2 3.6 63 10-73 8-71 (168)
No 1
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=7e-37 Score=215.21 Aligned_cols=226 Identities=31% Similarity=0.501 Sum_probs=144.2
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCC-CceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLD-KKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
|.+.||+|+++|+||||.|+.+....++++++++|+.++++.+ +. ++++++||||||.+++.++.++|++|+++|+++
T Consensus 26 L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l-~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~ 104 (255)
T PLN02965 26 LDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL-PPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVA 104 (255)
T ss_pred HhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc-CCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEc
Confidence 3467899999999999999866544578999999999999999 65 599999999999999999999999999999999
Q ss_pred cCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhh
Q 026718 81 ALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDM 160 (234)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (234)
+.....+........................ ...................+....................... +
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 179 (255)
T PLN02965 105 AAMVKPGSIISPRLKNVMEGTEKIWDYTFGE--GPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRA---F 179 (255)
T ss_pred cccCCCCCCccHHHHhhhhccccceeeeecc--CCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcc---h
Confidence 8643222111110110000000000000000 0000000001111122122222222111122212221111100 1
Q ss_pred hhhhccc-ccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhcc
Q 026718 161 SKELKLT-WERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 161 ~~~~~~~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
....... .....++|+++|+|++|..+|++..+.+.+.++++++++++++||++++|+|++|++.|.+|++..
T Consensus 180 ~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 180 QDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred hhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 1111111 122348999999999999999999999999999999999999999999999999999999998753
No 2
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.1e-34 Score=205.48 Aligned_cols=224 Identities=15% Similarity=0.056 Sum_probs=136.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC-CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH-NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
|.++||+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++++||||||.+++.++.++|++|+++|+++
T Consensus 69 L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l-~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 147 (302)
T PRK00870 69 LAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL-DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVAN 147 (302)
T ss_pred HHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeC
Confidence 445689999999999999986543 3479999999999999999 88899999999999999999999999999999999
Q ss_pred cCCCCCCcchhhhhhhhhhhcCCccccc-ccccCCCCCCCCcccccchhHHHHHhhcCCcccH----HHHHHhcCccccc
Q 026718 81 ALKPGPDLNISTLNQESFSRQGPLLDCK-YAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDW----ALATMLMRPLGLF 155 (234)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 155 (234)
+..+............+.... ...... ...... .........+.... +......... .............
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T PRK00870 148 TGLPTGDGPMPDAFWAWRAFS-QYSPVLPVGRLVN---GGTVRDLSDAVRAA-YDAPFPDESYKAGARAFPLLVPTSPDD 222 (302)
T ss_pred CCCCCccccchHHHhhhhccc-ccCchhhHHHHhh---ccccccCCHHHHHH-hhcccCChhhhcchhhhhhcCCCCCCC
Confidence 754322111010111111000 000000 000000 00000111111111 1100000000 0000000000000
Q ss_pred hhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCc---EEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 156 SEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQ---VEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
... .............++|+++|+|++|.+++... +.+.+.+++++ +++++++||++++|+|++|++.|.+|+++
T Consensus 223 ~~~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 223 PAV-AANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred cch-HHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 000 00000111122348999999999999999866 88899998776 88999999999999999999999999987
Q ss_pred c
Q 026718 233 Y 233 (234)
Q Consensus 233 ~ 233 (234)
+
T Consensus 301 ~ 301 (302)
T PRK00870 301 T 301 (302)
T ss_pred C
Confidence 5
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.4e-33 Score=201.40 Aligned_cols=220 Identities=11% Similarity=0.033 Sum_probs=135.5
Q ss_pred CCceEEeecCCCCCCCCCCCC------CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEE
Q 026718 5 SGHNVTAFDLAASGVEPQQVH------NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVF 78 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 78 (234)
+.|+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++++||||||.+++.+|.++|++|+++|+
T Consensus 54 ~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lil 132 (294)
T PLN02824 54 KSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-VGDPAFVICNSVGGVVGLQAAVDAPELVRGVML 132 (294)
T ss_pred hCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEE
Confidence 347999999999999987542 3589999999999999999 789999999999999999999999999999999
Q ss_pred eccCCCCCC-cch----hhhhhhhhhhcCC--cccccccccCCCC--------CCCCcccccchhHHHHHhhcCCcccHH
Q 026718 79 VSALKPGPD-LNI----STLNQESFSRQGP--LLDCKYAYDDGPD--------SPPTTFIFGPLYLKSTVYQLSPVEDWA 143 (234)
Q Consensus 79 ~~~~~~~~~-~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (234)
+++...... ... ......+...... .....+....... ...........................
T Consensus 133 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (294)
T PLN02824 133 INISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVD 212 (294)
T ss_pred ECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHH
Confidence 997643211 000 0000111100000 0000000000000 000000000111110000000000000
Q ss_pred HHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHH
Q 026718 144 LATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELW 223 (234)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 223 (234)
........ ............+++|+++|+|++|..++.+..+.+.+..+++++++++++||++++|+|++|+
T Consensus 213 ~~~~~~~~--------~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~ 284 (294)
T PLN02824 213 VFLDFISY--------SGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVN 284 (294)
T ss_pred HHHHHhcc--------ccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHH
Confidence 00000000 0000000112233889999999999999999998888888888999999999999999999999
Q ss_pred HHHHHHhhcc
Q 026718 224 AHLLSIAGNY 233 (234)
Q Consensus 224 ~~i~~fl~~~ 233 (234)
+.|.+|++++
T Consensus 285 ~~i~~fl~~~ 294 (294)
T PLN02824 285 PLIESFVARH 294 (294)
T ss_pred HHHHHHHhcC
Confidence 9999999864
No 4
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=4e-33 Score=198.42 Aligned_cols=217 Identities=12% Similarity=0.122 Sum_probs=135.4
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++|+|+++|+||||.|+.+.. .++++++++++.++++++ +.++++|+||||||.+++.+|.++|++|+++|+++++.
T Consensus 49 ~~~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~~~~~i~~l-~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 49 DPDLEVIAFDVPGVGGSSTPRH-PYRFPGLAKLAARMLDYL-DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAA 126 (276)
T ss_pred ccCceEEEECCCCCCCCCCCCC-cCcHHHHHHHHHHHHHHh-CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCC
Confidence 3579999999999999987654 479999999999999999 88999999999999999999999999999999999875
Q ss_pred CCCCcc-hhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhh
Q 026718 84 PGPDLN-ISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSK 162 (234)
Q Consensus 84 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (234)
...... ........... ........................+......................... ..
T Consensus 127 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~- 196 (276)
T TIGR02240 127 GAVMVPGKPKVLMMMASP-RRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAG--------LG- 196 (276)
T ss_pred ccccCCCchhHHHHhcCc-hhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHH--------cC-
Confidence 321111 00000000000 00000000000000000000000000000000000000000000000000 00
Q ss_pred hhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhcc
Q 026718 163 ELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 163 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
.........+++|+++|+|++|++++++..+.+.+.++++++++++ +||++++|+|+++++.|.+|+++.
T Consensus 197 ~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 197 WTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIID-DGHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred CchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEc-CCCchhhccHHHHHHHHHHHHHHh
Confidence 0000112234889999999999999999999999999999999998 599999999999999999999864
No 5
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=8.6e-33 Score=190.26 Aligned_cols=226 Identities=20% Similarity=0.233 Sum_probs=140.7
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC-CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH-NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
|+.+||+|+|+|+||+|.|+.|.. ..|++..++.|+..+++++ +.++++++||+||+++|+.+|..+|++|+++|.++
T Consensus 67 la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~L-g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~n 145 (322)
T KOG4178|consen 67 LASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHL-GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLN 145 (322)
T ss_pred hhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHh-ccceeEEEeccchhHHHHHHHHhChhhcceEEEec
Confidence 677899999999999999999876 7799999999999999999 89999999999999999999999999999999999
Q ss_pred cCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhh------------------cCCcccH
Q 026718 81 ALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQ------------------LSPVEDW 142 (234)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~ 142 (234)
.+...+............ ...+....+......... ......+.+...+.. ....++.
T Consensus 146 v~~~~p~~~~~~~~~~~f--~~~~y~~~fQ~~~~~E~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi 221 (322)
T KOG4178|consen 146 VPFPNPKLKPLDSSKAIF--GKSYYICLFQEPGKPETE--LSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDI 221 (322)
T ss_pred CCCCCcccchhhhhcccc--CccceeEeccccCcchhh--hccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHH
Confidence 765522111100000000 000000000000000000 000000000000000 0011122
Q ss_pred HHHHHhcCccc------cchhhhhhhhhc--ccccccCCccEEEEeeCCCccccHH-HHHHHHHhCCCC-cEEEccCCCc
Q 026718 143 ALATMLMRPLG------LFSEEDMSKELK--LTWERYGTVRRVYIISEKDLVTEKD-LAMWMIKRNPPH-QVEEIKDSDH 212 (234)
Q Consensus 143 ~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH 212 (234)
+.......... ...+ +..... ......+++|+++|+|++|.+.+.. ....+.+..|.. +.++++++||
T Consensus 222 ~~~~~~f~~~g~~gplNyyrn--~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH 299 (322)
T KOG4178|consen 222 AFYVSKFQIDGFTGPLNYYRN--FRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGH 299 (322)
T ss_pred HHHHhccccccccccchhhHH--HhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcc
Confidence 22211111111 1100 111110 1112233789999999999999876 455566667765 7889999999
Q ss_pred ceeecChHHHHHHHHHHhhccC
Q 026718 213 MVMMSKPLELWAHLLSIAGNYS 234 (234)
Q Consensus 213 ~~~~~~p~~~~~~i~~fl~~~~ 234 (234)
+++.|+|+++++.|.+|++++.
T Consensus 300 ~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 300 FVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred cccccCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999863
No 6
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=4e-32 Score=191.93 Aligned_cols=224 Identities=37% Similarity=0.572 Sum_probs=147.7
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
|.++||+|+++|+||||.|.......++++++++++.++++.+...++++|+||||||.+++.++.++|++|+++|++++
T Consensus 41 L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~ 120 (273)
T PLN02211 41 MENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAA 120 (273)
T ss_pred HHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecc
Confidence 44579999999999999986544334799999999999999983358999999999999999999999999999999987
Q ss_pred CCCCCCcchhhhhhhhhhhcCCccc--cccc-ccC-CCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchh
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLD--CKYA-YDD-GPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSE 157 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (234)
..+..+..... .+....+.+.. ..+. ... .............+.....++...+...........+..+...
T Consensus 121 ~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 196 (273)
T PLN02211 121 TMLKLGFQTDE---DMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILA- 196 (273)
T ss_pred ccCCCCCCHHH---HHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccc-
Confidence 65433322111 01111100000 0000 000 0000011111233333444455444444443334333322111
Q ss_pred hhhhhhhccc-ccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 158 EDMSKELKLT-WERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 158 ~~~~~~~~~~-~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
+....... ...+.++|+++|.|++|..+|++.++.+.+.+++.+++.++ +||.+++++|+++++.|.++...
T Consensus 197 --~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 197 --LRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred --cccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 21111111 12344789999999999999999999999999988999997 99999999999999999998764
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.6e-32 Score=195.41 Aligned_cols=227 Identities=15% Similarity=0.093 Sum_probs=133.3
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
|.+. |+|+++|+||||.|+.+.. .++++++++|+.++++++ +.++++++||||||.+++.++.++|++|+++|++++
T Consensus 50 L~~~-~~via~D~~G~G~S~~~~~-~~~~~~~a~dl~~ll~~l-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 50 LAGL-GRCLAPDLIGMGASDKPDI-DYTFADHARYLDAWFDAL-GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred HhhC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 3344 5999999999999988764 479999999999999999 889999999999999999999999999999999997
Q ss_pred CCCCCC-cchhhhhhhhhhhcC-Ccccc-ccc---ccCC-CCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCcccc
Q 026718 82 LKPGPD-LNISTLNQESFSRQG-PLLDC-KYA---YDDG-PDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGL 154 (234)
Q Consensus 82 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~-~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (234)
...... ............... ..... ... .+.. ...........++......................+....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (295)
T PRK03592 127 IVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPI 206 (295)
T ss_pred CCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCC
Confidence 432211 000000000000000 00000 000 0000 0000000011111111111110111111111111110000
Q ss_pred --chhhhhhhh-hc-ccccccCCccEEEEeeCCCccccHH-HHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHH
Q 026718 155 --FSEEDMSKE-LK-LTWERYGTVRRVYIISEKDLVTEKD-LAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSI 229 (234)
Q Consensus 155 --~~~~~~~~~-~~-~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 229 (234)
.... .... .. ......+++|+++|+|++|.++++. ..+.+.+..+++++++++++||++++|+|+++++.|.+|
T Consensus 207 ~~~~~~-~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~f 285 (295)
T PRK03592 207 DGEPAD-VVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAW 285 (295)
T ss_pred CCcchh-hHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHH
Confidence 0000 0000 00 0111234889999999999999544 444455667889999999999999999999999999999
Q ss_pred hhc
Q 026718 230 AGN 232 (234)
Q Consensus 230 l~~ 232 (234)
+++
T Consensus 286 l~~ 288 (295)
T PRK03592 286 LRR 288 (295)
T ss_pred HHH
Confidence 975
No 8
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=4e-32 Score=193.61 Aligned_cols=223 Identities=12% Similarity=0.085 Sum_probs=132.3
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++|+|+++|+||||.|+.+....++++++++++.++++++ +.++++++||||||.+++.++..+|++|+++|++++..
T Consensus 58 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 58 RDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred hCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh-CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 35699999999999999876554578999999999999999 88999999999999999999999999999999988653
Q ss_pred CCCCcchhhhhhhhhhhcC---Cccc-ccccccCCCCCCCCcccccchhHHHHHhhcCCc-ccHHHHHHhcCccccchhh
Q 026718 84 PGPDLNISTLNQESFSRQG---PLLD-CKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPV-EDWALATMLMRPLGLFSEE 158 (234)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 158 (234)
..................+ .... ..+......... .......... .+...... ...................
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (286)
T PRK03204 137 WPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGT--EHRPSSAVMA-HYRAVQPNAAARRGVAEMPKQILAARPL 213 (286)
T ss_pred cCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccc--cCCCCHHHHH-HhcCCCCCHHHHHHHHHHHHhcchhhHH
Confidence 2111000000000000000 0000 000000000000 0000000000 00000000 0000000000000000000
Q ss_pred hhhhhhcccccccCCccEEEEeeCCCccccHH-HHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 159 DMSKELKLTWERYGTVRRVYIISEKDLVTEKD-LAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
+............++||++|+|++|.++++. ..+.+.+.+|+.++++++++||++++|+|+++++.|.+|+.
T Consensus 214 -~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 214 -LARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred -HHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 0000000001112789999999999988654 57889999999999999999999999999999999999973
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=3.1e-32 Score=194.80 Aligned_cols=221 Identities=13% Similarity=0.019 Sum_probs=132.5
Q ss_pred CCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 3 KSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.+.||+|+++|+||||.|+.+.........+++++.++++.+ +.++++++||||||.+++.++.++|++++++|++++.
T Consensus 57 ~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 57 VDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL-DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred HhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc-CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCC
Confidence 456899999999999999865322122225789999999999 8999999999999999999999999999999999975
Q ss_pred CCCCCc--chh-hhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhc-CCcccHHHHHHhcCccccchhh
Q 026718 83 KPGPDL--NIS-TLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQL-SPVEDWALATMLMRPLGLFSEE 158 (234)
Q Consensus 83 ~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 158 (234)
...... ... .................+......... ................. .................
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 209 (282)
T TIGR03343 136 GLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLF-DQSLITEELLQGRWENIQRQPEHLKNFLISSQKAP----- 209 (282)
T ss_pred CCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCcc-CcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccc-----
Confidence 321110 000 000000000000000000000000000 00000111100000000 00000000000000000
Q ss_pred hhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 159 DMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
+...........+++|+++++|++|..++++..+++.+.+|++++++++++||+++.|+|++|++.|.+|++
T Consensus 210 -~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 210 -LSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred -cccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 000000011223489999999999999999999999999999999999999999999999999999999986
No 10
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.6e-32 Score=200.11 Aligned_cols=220 Identities=11% Similarity=0.083 Sum_probs=132.1
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHH-hCCcccceeEEeccC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSME-RFPNKISVAVFVSAL 82 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~lvl~~~~ 82 (234)
.++|+|+++|+||||.|+.+....++++++++++.++++++ +.++++|+||||||.+++.++. .+|++|+++|++++.
T Consensus 112 ~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 112 AKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred hcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 34799999999999999876544589999999999999999 8899999999999999999887 479999999999976
Q ss_pred CCCCCcch-hhhhhhhh-h------h---cCCcccccccccCCCC--------CCCCcccccchhHHHHHhh-cCCcccH
Q 026718 83 KPGPDLNI-STLNQESF-S------R---QGPLLDCKYAYDDGPD--------SPPTTFIFGPLYLKSTVYQ-LSPVEDW 142 (234)
Q Consensus 83 ~~~~~~~~-~~~~~~~~-~------~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~ 142 (234)
........ ........ . . .+......+....... .........+.... .+.. .......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 269 (360)
T PLN02679 191 GGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVE-IIRGPADDEGAL 269 (360)
T ss_pred cccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHH-HHHhhccCCChH
Confidence 43211100 00000000 0 0 0000000000000000 00000000000000 0000 0000000
Q ss_pred HHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHH-----HHHHHHhCCCCcEEEccCCCcceeec
Q 026718 143 ALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDL-----AMWMIKRNPPHQVEEIKDSDHMVMMS 217 (234)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~~ 217 (234)
.......... ...........+++|+++|+|++|.++|++. .+.+.+.+|++++++++++||++++|
T Consensus 270 ~~~~~~~~~~--------~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E 341 (360)
T PLN02679 270 DAFVSIVTGP--------PGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDD 341 (360)
T ss_pred HHHHHHHhcC--------CCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCcccc
Confidence 1111100000 0000001112337899999999999998763 34566778999999999999999999
Q ss_pred ChHHHHHHHHHHhhcc
Q 026718 218 KPLELWAHLLSIAGNY 233 (234)
Q Consensus 218 ~p~~~~~~i~~fl~~~ 233 (234)
+|+++++.|.+|+++.
T Consensus 342 ~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 342 RPDLVHEKLLPWLAQL 357 (360)
T ss_pred CHHHHHHHHHHHHHhc
Confidence 9999999999999864
No 11
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=3.4e-32 Score=199.33 Aligned_cols=218 Identities=18% Similarity=0.202 Sum_probs=134.3
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC-----CCCceEEEeeChhHHHHHHHHHhCCccccee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP-----LDKKVILVGHSYGGLAVAQSMERFPNKISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 76 (234)
|++.||+|+++|+||||.|+.+.....+++++++|+.++++.+. ...+++|+||||||.+++.++.++|++++++
T Consensus 111 l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~gl 190 (349)
T PLN02385 111 IASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGA 190 (349)
T ss_pred HHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhhe
Confidence 45679999999999999998765544689999999999998772 1237999999999999999999999999999
Q ss_pred EEeccCCCCCCcc-hhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhc-----CCcccHHHHHHhcC
Q 026718 77 VFVSALKPGPDLN-ISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQL-----SPVEDWALATMLMR 150 (234)
Q Consensus 77 vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 150 (234)
|+++|........ ................... ... +........+... ........ ............
T Consensus 191 VLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-- 264 (349)
T PLN02385 191 ILVAPMCKIADDVVPPPLVLQILILLANLLPKA-KLV--PQKDLAELAFRDL-KKRKMAEYNVIAYKDKPRLRTAVEL-- 264 (349)
T ss_pred eEecccccccccccCchHHHHHHHHHHHHCCCc-eec--CCCccccccccCH-HHHHHhhcCcceeCCCcchHHHHHH--
Confidence 9999865322111 0001111100000000000 000 0000000000000 00000000 000000000000
Q ss_pred ccccchhhhhhhhhc-ccccccCCccEEEEeeCCCccccHHHHHHHHHhC--CCCcEEEccCCCcceeecChHH----HH
Q 026718 151 PLGLFSEEDMSKELK-LTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRN--PPHQVEEIKDSDHMVMMSKPLE----LW 223 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~----~~ 223 (234)
+..... .......++|+|+|+|++|.+++++..+.+.+.+ +++++++++++||+++.|+|++ +.
T Consensus 265 ---------l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~ 335 (349)
T PLN02385 265 ---------LRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVL 335 (349)
T ss_pred ---------HHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHH
Confidence 110000 0112223899999999999999999999998887 4689999999999999999987 78
Q ss_pred HHHHHHhhccC
Q 026718 224 AHLLSIAGNYS 234 (234)
Q Consensus 224 ~~i~~fl~~~~ 234 (234)
+.|.+|+++++
T Consensus 336 ~~i~~wL~~~~ 346 (349)
T PLN02385 336 DDIISWLDSHS 346 (349)
T ss_pred HHHHHHHHHhc
Confidence 88999998753
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=2.9e-31 Score=197.41 Aligned_cols=225 Identities=12% Similarity=0.077 Sum_probs=135.4
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHH-HHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLI-DFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~-~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+++|+|+++|+||||.|+.+....++++++++++. .+++.+ +.++++++||||||.+++.+|.++|++|+++|+++++
T Consensus 230 ~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~l-g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 230 KSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERY-KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred hCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHc-CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 46899999999999999877555689999999995 899999 8899999999999999999999999999999999975
Q ss_pred CCCCCcchhhhhhhhhhhc---CCcccccccccC----CCCCCCCc--ccccchhHH---HHHhhcCCcccHHHHHHhcC
Q 026718 83 KPGPDLNISTLNQESFSRQ---GPLLDCKYAYDD----GPDSPPTT--FIFGPLYLK---STVYQLSPVEDWALATMLMR 150 (234)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 150 (234)
.......... ........ ..+....+.... ........ ......... .......... ........
T Consensus 309 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~~ 385 (481)
T PLN03087 309 YYPVPKGVQA-TQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRT--FLIEGFFC 385 (481)
T ss_pred ccccccchhH-HHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhH--HHHHHHHh
Confidence 4322111100 00000000 000000000000 00000000 000000000 0000000000 00000000
Q ss_pred --ccccchh------h-hhhhhhcccc-cccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceee-cCh
Q 026718 151 --PLGLFSE------E-DMSKELKLTW-ERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMM-SKP 219 (234)
Q Consensus 151 --~~~~~~~------~-~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p 219 (234)
....... . .......+.. ...+++|+++|+|++|.++|++..+.+++.+|++++++++++||++++ |+|
T Consensus 386 ~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p 465 (481)
T PLN03087 386 HTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQ 465 (481)
T ss_pred ccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCH
Confidence 0000000 0 0000000000 112389999999999999999999999999999999999999999986 999
Q ss_pred HHHHHHHHHHhhc
Q 026718 220 LELWAHLLSIAGN 232 (234)
Q Consensus 220 ~~~~~~i~~fl~~ 232 (234)
++|++.|.+|.+.
T Consensus 466 ~~fa~~L~~F~~~ 478 (481)
T PLN03087 466 KEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999999864
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.2e-30 Score=184.06 Aligned_cols=208 Identities=13% Similarity=0.100 Sum_probs=134.8
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++|+|+++|+||||.|..+.. ++++++++|+.++++++ +.++++++||||||.+++.+|.++|++|+++|++++.+
T Consensus 40 ~~~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~l-~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~ 116 (255)
T PRK10673 40 VNDHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDAL-QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAP 116 (255)
T ss_pred hhCCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHHc-CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCC
Confidence 3579999999999999987554 79999999999999999 88899999999999999999999999999999998643
Q ss_pred CCCCcch-hhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCccc-HHHHHHhcCccc-c-chhh-
Q 026718 84 PGPDLNI-STLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVED-WALATMLMRPLG-L-FSEE- 158 (234)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~- 158 (234)
....... .......... ... . ..........+........ ........+... . ....
T Consensus 117 ~~~~~~~~~~~~~~~~~~----~~~-----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (255)
T PRK10673 117 VDYHVRRHDEIFAAINAV----SEA-----G---------ATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVL 178 (255)
T ss_pred CCccchhhHHHHHHHHHh----hhc-----c---------cccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHH
Confidence 2211100 0000000000 000 0 0000000000000000000 000000000000 0 0000
Q ss_pred --hhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 159 --DMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 159 --~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
.+............++|+++|+|++|..++++..+.+.+.++++++++++++||++++++|+++++.|.+|+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 179 WDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred HHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 01111111112223789999999999999999999999999999999999999999999999999999999975
No 14
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=6.1e-31 Score=193.33 Aligned_cols=219 Identities=11% Similarity=-0.024 Sum_probs=130.5
Q ss_pred CCCceEEeecCCCCCCCCCCCCC------CCchhhhhhHHHHHH-HhcCCCCceE-EEeeChhHHHHHHHHHhCCcccce
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHN------LRSISDFFKPLIDFM-AALPLDKKVI-LVGHSYGGLAVAQSMERFPNKISV 75 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~l~~~l-~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~ 75 (234)
.++|+||++|+||||.|+.+... .++++++++++.+++ +++ +.++++ ++||||||++|+.+|.++|++|++
T Consensus 103 ~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l-gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~ 181 (360)
T PRK06489 103 ASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL-GVKHLRLILGTSMGGMHAWMWGEKYPDFMDA 181 (360)
T ss_pred ccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc-CCCceeEEEEECHHHHHHHHHHHhCchhhhe
Confidence 57899999999999999865431 478999999988865 778 788885 899999999999999999999999
Q ss_pred eEEeccCCCCCCcchhhhhhh---hhhhcCCcccccccccCCCCCCCCcccccchhHHH----------HHh-hcCCccc
Q 026718 76 AVFVSALKPGPDLNISTLNQE---SFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKS----------TVY-QLSPVED 141 (234)
Q Consensus 76 lvl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~ 141 (234)
+|++++............... .......+.... + ... .... ...... .+. .......
T Consensus 182 LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (360)
T PRK06489 182 LMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGN---Y---TTQ--PPSL-KRANPMFAIATSGGTLAYQAQAPTRAA 252 (360)
T ss_pred eeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCC---C---CCC--HHHH-HHHHHHHHHHHhCCHHHHHHhcCChHH
Confidence 999987532111110000000 000000000000 0 000 0000 000000 000 0000000
Q ss_pred -HHHHHHhcCccccc-hhh---hhh---hhhcccccccCCccEEEEeeCCCccccHHHH--HHHHHhCCCCcEEEccCC-
Q 026718 142 -WALATMLMRPLGLF-SEE---DMS---KELKLTWERYGTVRRVYIISEKDLVTEKDLA--MWMIKRNPPHQVEEIKDS- 210 (234)
Q Consensus 142 -~~~~~~~~~~~~~~-~~~---~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~- 210 (234)
.............. ... .+. ..........+++|+|+|+|++|.++|++.. +.+.+.+|++++++++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~ 332 (360)
T PRK06489 253 ADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASP 332 (360)
T ss_pred HHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCC
Confidence 00000000000000 000 000 0000111223489999999999999998865 789999999999999985
Q ss_pred ---CcceeecChHHHHHHHHHHhhcc
Q 026718 211 ---DHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 211 ---gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
||.++ ++|++|++.|.+|++++
T Consensus 333 ~~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 333 ETRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCCCcccc-cCHHHHHHHHHHHHHhc
Confidence 99997 89999999999999864
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.98 E-value=2e-31 Score=187.96 Aligned_cols=205 Identities=14% Similarity=0.096 Sum_probs=125.3
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
++|+|+++|+||||.|+... .++++++++++.+ + ..++++++||||||.+++.+|.++|++|+++|++++.+.
T Consensus 38 ~~~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~-~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~ 110 (256)
T PRK10349 38 SHFTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q-APDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPC 110 (256)
T ss_pred cCCEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c-CCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccc
Confidence 46999999999999998653 3688877776653 4 568999999999999999999999999999999987543
Q ss_pred CCCcch-hh----hhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCC-cccHHH-HHHhcC-ccccc-
Q 026718 85 GPDLNI-ST----LNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSP-VEDWAL-ATMLMR-PLGLF- 155 (234)
Q Consensus 85 ~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~-~~~~~- 155 (234)
...... .. ....+........... ...++......... ...... ...... .....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T PRK10349 111 FSARDEWPGIKPDVLAGFQQQLSDDFQRT----------------VERFLALQTMGTETARQDARALKKTVLALPMPEVD 174 (256)
T ss_pred eecCCCCCcccHHHHHHHHHHHHhchHHH----------------HHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHH
Confidence 211100 00 0000100000000000 00000000000000 000000 000000 00000
Q ss_pred -h-hh-h-hhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 156 -S-EE-D-MSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 156 -~-~~-~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
. .. . +............++|+++|+|++|.++|.+..+.+.+.++++++++++++||++++|+|++|++.|.+|-+
T Consensus 175 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 175 VLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 0 00 0 000011111223489999999999999999999999999999999999999999999999999999999865
Q ss_pred c
Q 026718 232 N 232 (234)
Q Consensus 232 ~ 232 (234)
+
T Consensus 255 ~ 255 (256)
T PRK10349 255 R 255 (256)
T ss_pred c
Confidence 4
No 16
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=3.4e-30 Score=184.05 Aligned_cols=218 Identities=14% Similarity=0.017 Sum_probs=134.2
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
+++|+|+++|+||||.|+.+....++++++++|+.++++++ +.++++++||||||.+++.++.++|++++++|++++..
T Consensus 52 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~-~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 52 ARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE-GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred hhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc-CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 35799999999999999876654589999999999999998 77899999999999999999999999999999998754
Q ss_pred CCCCcchhh---hhhhhhhhcCCcccccccccCCCCCCC------CcccccchhHHHHHhhcCCcccHHHHHHhcCcccc
Q 026718 84 PGPDLNIST---LNQESFSRQGPLLDCKYAYDDGPDSPP------TTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGL 154 (234)
Q Consensus 84 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (234)
......... ......... ................. ................................
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 206 (278)
T TIGR03056 131 MPFEGMAGTLFPYMARVLACN-PFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQ--- 206 (278)
T ss_pred cccccccccccchhhHhhhhc-ccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhc---
Confidence 321110000 000000000 00000000000000000 00000000000000000000000000000000
Q ss_pred chhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 155 FSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
............+++|+++|+|++|..+|++..+.+.+.+++++++.++++||++++|+|+++++.|.+|++
T Consensus 207 -----~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 207 -----WDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred -----ccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 000000011223378999999999999999999999999999999999999999999999999999999984
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=3.9e-31 Score=186.70 Aligned_cols=213 Identities=15% Similarity=0.159 Sum_probs=135.8
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++|+|+++|+||||.|..+....++++++++++.++++.+ +.++++++||||||.+++.++.++|++|+++|++++..
T Consensus 37 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 37 TQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL-NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWS 115 (257)
T ss_pred HhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCC
Confidence 45799999999999999876555689999999999999999 88999999999999999999999999999999999754
Q ss_pred CCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHH--------HhhcCCcccHHHHHHhcCccccc
Q 026718 84 PGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKST--------VYQLSPVEDWALATMLMRPLGLF 155 (234)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 155 (234)
........ ................+... .. .......+.... ...................
T Consensus 116 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 184 (257)
T TIGR03611 116 RPDPHTRR-CFDVRIALLQHAGPEAYVHA----QA--LFLYPADWISENAARLAADEAHALAHFPGKANVLRRINA---- 184 (257)
T ss_pred CCChhHHH-HHHHHHHHHhccCcchhhhh----hh--hhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHH----
Confidence 43211110 00000000000000000000 00 000000000000 0000000000000000000
Q ss_pred hhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 156 SEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
+............++|+++++|++|..+|++..+.+.+.+++++++.++++||++++++|+++++.|.+|++.
T Consensus 185 ----~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 185 ----LEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred ----HHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 0000000112233789999999999999999999999999999999999999999999999999999999863
No 18
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=2.4e-30 Score=178.86 Aligned_cols=222 Identities=18% Similarity=0.211 Sum_probs=129.9
Q ss_pred CceEEeecCCCCCCCCCCCCC---CCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 6 GHNVTAFDLAASGVEPQQVHN---LRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.++|+++|++|+|+|++|... ......+++-++++-... ++.+.+|+|||+||+++..||.+||++|+.|||++|.
T Consensus 116 ~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~-~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 116 IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKM-GLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHc-CCcceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 689999999999999987642 234567889999999998 9999999999999999999999999999999999997
Q ss_pred CCCCCc-chh---hhhhhhhhhcCCccccc----ccccCCCCCCCCc------------ccccchhHHHHHhhcCCcc--
Q 026718 83 KPGPDL-NIS---TLNQESFSRQGPLLDCK----YAYDDGPDSPPTT------------FIFGPLYLKSTVYQLSPVE-- 140 (234)
Q Consensus 83 ~~~~~~-~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-- 140 (234)
...... ... .....+......+.... ......+..+... .....+.+.+.++......
T Consensus 195 Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~ps 274 (365)
T KOG4409|consen 195 GFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPS 274 (365)
T ss_pred ccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCc
Confidence 643311 100 00001100000000000 0000000000000 0111122222222211111
Q ss_pred cHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHh--CCCCcEEEccCCCcceeecC
Q 026718 141 DWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKR--NPPHQVEEIKDSDHMVMMSK 218 (234)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~~~~~ 218 (234)
.......+.........- +...... . ..+||+++|+|++|.+-. ....++.+. ...++++++|++||.+++++
T Consensus 275 gE~~fk~l~~~~g~Ar~P-m~~r~~~--l-~~~~pv~fiyG~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDn 349 (365)
T KOG4409|consen 275 GETAFKNLFEPGGWARRP-MIQRLRE--L-KKDVPVTFIYGDRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDN 349 (365)
T ss_pred HHHHHHHHHhccchhhhh-HHHHHHh--h-ccCCCEEEEecCcccccc-hhHHHHHHHhhcccceEEEecCCCceeecCC
Confidence 111111111111111000 1111111 1 116899999999997744 444445443 23579999999999999999
Q ss_pred hHHHHHHHHHHhhcc
Q 026718 219 PLELWAHLLSIAGNY 233 (234)
Q Consensus 219 p~~~~~~i~~fl~~~ 233 (234)
|+.|++.|.+++++.
T Consensus 350 p~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 350 PEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999865
No 19
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=1.3e-30 Score=190.50 Aligned_cols=225 Identities=9% Similarity=0.025 Sum_probs=131.1
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC--CCCchhh-----hhhHHHH----HHHhcCCCCc-eEEEeeChhHHHHHHHHHhC
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH--NLRSISD-----FFKPLID----FMAALPLDKK-VILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~-----~~~~l~~----~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~ 69 (234)
|...+|+||++|+||||.|+.+.. ..+++++ +++|+.+ +++++ +.++ ++||||||||++|+.+|.+|
T Consensus 67 l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-gi~~~~~lvG~S~GG~va~~~a~~~ 145 (339)
T PRK07581 67 LDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF-GIERLALVVGWSMGAQQTYHWAVRY 145 (339)
T ss_pred cCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh-CCCceEEEEEeCHHHHHHHHHHHHC
Confidence 345689999999999999986542 1345543 5666665 66788 8889 58999999999999999999
Q ss_pred CcccceeEEeccCCCCCCcchhhhhhhhhh---hcCCcccccccccCCCCCC-------CCcccccchhHH---------
Q 026718 70 PNKISVAVFVSALKPGPDLNISTLNQESFS---RQGPLLDCKYAYDDGPDSP-------PTTFIFGPLYLK--------- 130 (234)
Q Consensus 70 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--------- 130 (234)
|++|+++|++++......... ........ ..+.+....+.. .+... .....+.+.++.
T Consensus 146 P~~V~~Lvli~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (339)
T PRK07581 146 PDMVERAAPIAGTAKTTPHNF-VFLEGLKAALTADPAFNGGWYAE--PPERGLRAHARVYAGWGFSQAFYRQELWRAMGY 222 (339)
T ss_pred HHHHhhheeeecCCCCCHHHH-HHHHHHHHHHHhCCCCCCCCCCC--cHHHHHHHHHHHHHHHHhHHHHHHhhhccccCh
Confidence 999999999987654221110 00000000 000000000000 00000 000000000000
Q ss_pred --------HHHhhc---CCcccHHHH-HHhcCccccchhhhhh-hhhcccccccCCccEEEEeeCCCccccHHHHHHHHH
Q 026718 131 --------STVYQL---SPVEDWALA-TMLMRPLGLFSEEDMS-KELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIK 197 (234)
Q Consensus 131 --------~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 197 (234)
...... ......... ....+.. .... .. ..........+++|||+|+|++|..+|++..+.+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~--~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~ 299 (339)
T PRK07581 223 ASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGD-ISRN--PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAA 299 (339)
T ss_pred hhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcc-cccC--cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 000000 000000000 0000000 0000 00 000011122348899999999999999999999999
Q ss_pred hCCCCcEEEccC-CCcceeecChHHHHHHHHHHhhcc
Q 026718 198 RNPPHQVEEIKD-SDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 198 ~~~~~~~~~~~~-~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
.+|+++++++++ +||++++++|+.+++.|.+|++++
T Consensus 300 ~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 300 LIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred hCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 999999999998 899999999999999999999874
No 20
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=8e-30 Score=186.31 Aligned_cols=223 Identities=13% Similarity=0.084 Sum_probs=134.9
Q ss_pred CCCceEEeecCCCCCCCCCCCC---CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 4 SSGHNVTAFDLAASGVEPQQVH---NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
+++|+|+++|+||||.|+.+.. ..++++++++++.++++++ +.++++|+|||+||.+++.++.++|++|+++|+++
T Consensus 151 ~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~ 229 (383)
T PLN03084 151 SKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLN 229 (383)
T ss_pred hcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh-CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEEC
Confidence 3579999999999999987653 2479999999999999999 88999999999999999999999999999999999
Q ss_pred cCCCCCCcchhhhhhhhhhhc-CCcccc-cccccCCCCCCCCcccccchhHHHHHhhcCCcc----cHH-HHHHhcCccc
Q 026718 81 ALKPGPDLNISTLNQESFSRQ-GPLLDC-KYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVE----DWA-LATMLMRPLG 153 (234)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~ 153 (234)
+...............+.... ..+... ...................+............. ... ..........
T Consensus 230 ~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~ 309 (383)
T PLN03084 230 PPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELK 309 (383)
T ss_pred CCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccc
Confidence 865322111111111110000 000000 000000000000000000111000000000000 000 0011100000
Q ss_pred cchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 154 LFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
.. .............++|+++|+|++|.+++.+..+.+++. ++.++++++++||++++|+|+++++.|.+|+.+
T Consensus 310 ~~----~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 310 KY----IEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hh----hHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 00 000000000112388999999999999999988888887 578999999999999999999999999999863
No 21
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=3.1e-30 Score=188.00 Aligned_cols=218 Identities=14% Similarity=0.110 Sum_probs=131.3
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC-----CCCceEEEeeChhHHHHHHHHHhCCccccee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP-----LDKKVILVGHSYGGLAVAQSMERFPNKISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 76 (234)
|+++||+|+++|+||||.|+.......+++.+++|+.++++.+. ...+++|+||||||.+++.++.++|++|+++
T Consensus 83 L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~l 162 (330)
T PLN02298 83 LAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGA 162 (330)
T ss_pred HHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeE
Confidence 55789999999999999998655544689999999999999872 1247999999999999999999999999999
Q ss_pred EEeccCCCCCCcch-hhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCc-----ccHHHHHHhcC
Q 026718 77 VFVSALKPGPDLNI-STLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPV-----EDWALATMLMR 150 (234)
Q Consensus 77 vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 150 (234)
|+++|......... .............+...... ............... ...+....+. ..........+
T Consensus 163 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (330)
T PLN02298 163 VLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAI---VPTADLLEKSVKVPA-KKIIAKRNPMRYNGKPRLGTVVELLR 238 (330)
T ss_pred EEecccccCCcccCCchHHHHHHHHHHHHCCCCcc---ccCCCcccccccCHH-HHHHHHhCccccCCCccHHHHHHHHH
Confidence 99998653221100 00000000000000000000 000000000000000 0000000000 00000000000
Q ss_pred ccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeecChHH----HHH
Q 026718 151 PLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMSKPLE----LWA 224 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~----~~~ 224 (234)
. ... ........++|+|+|+|++|.++|++..+.+.+.++ ++++++++++||.+++++|+. +.+
T Consensus 239 ~--------~~~--~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~ 308 (330)
T PLN02298 239 V--------TDY--LGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRR 308 (330)
T ss_pred H--------HHH--HHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHH
Confidence 0 000 001122237999999999999999999999888764 789999999999999998864 666
Q ss_pred HHHHHhhcc
Q 026718 225 HLLSIAGNY 233 (234)
Q Consensus 225 ~i~~fl~~~ 233 (234)
.|.+|+.++
T Consensus 309 ~i~~fl~~~ 317 (330)
T PLN02298 309 DILSWLNER 317 (330)
T ss_pred HHHHHHHHh
Confidence 788888754
No 22
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=3.3e-30 Score=188.35 Aligned_cols=217 Identities=14% Similarity=0.039 Sum_probs=130.2
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCc-eEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKK-VILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.++|+||++|+||||.|... .+++.++++|+.++++++ +.++ ++++||||||++++.+|.++|++|+++|++++.
T Consensus 97 ~~~~~Vi~~Dl~G~g~s~~~---~~~~~~~a~dl~~ll~~l-~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~ 172 (343)
T PRK08775 97 PARFRLLAFDFIGADGSLDV---PIDTADQADAIALLLDAL-GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGA 172 (343)
T ss_pred ccccEEEEEeCCCCCCCCCC---CCCHHHHHHHHHHHHHHc-CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcc
Confidence 46899999999999988422 368899999999999999 7766 579999999999999999999999999999986
Q ss_pred CCCCCcchhhhhh--hhhhhcCCcc---cc---cccccCCCCCCCCcccccchhHHHHHhhcCC------ccc-HHHHH-
Q 026718 83 KPGPDLNISTLNQ--ESFSRQGPLL---DC---KYAYDDGPDSPPTTFIFGPLYLKSTVYQLSP------VED-WALAT- 146 (234)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~- 146 (234)
....... ..... .......... .. ....... ........+...+..... ... .....
T Consensus 173 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 245 (343)
T PRK08775 173 HRAHPYA-AAWRALQRRAVALGQLQCAEKHGLALARQLAM------LSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDA 245 (343)
T ss_pred ccCCHHH-HHHHHHHHHHHHcCCCCCCchhHHHHHHHHHH------HHcCCHHHHHHHhCCCccccCCCccchHHHHHHH
Confidence 4322110 00000 0000000000 00 0000000 000000000001100000 000 00000
Q ss_pred ---HhcCc-cccchhhhhhhhhc--ccccccCCccEEEEeeCCCccccHHHHHHHHHhC-CCCcEEEccC-CCcceeecC
Q 026718 147 ---MLMRP-LGLFSEEDMSKELK--LTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRN-PPHQVEEIKD-SDHMVMMSK 218 (234)
Q Consensus 147 ---~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~~~ 218 (234)
..... ....... +..... ......+++|+|+|+|++|.++|++..+.+.+.+ |+++++++++ +||++++|+
T Consensus 246 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~ 324 (343)
T PRK08775 246 AGAQYVARTPVNAYLR-LSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKE 324 (343)
T ss_pred HHHHHHHhcChhHHHH-HHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcC
Confidence 00000 0000000 000000 0012234889999999999999999888888877 6899999985 999999999
Q ss_pred hHHHHHHHHHHhhc
Q 026718 219 PLELWAHLLSIAGN 232 (234)
Q Consensus 219 p~~~~~~i~~fl~~ 232 (234)
|++|++.|.+|+++
T Consensus 325 Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 325 TDRIDAILTTALRS 338 (343)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999975
No 23
>PLN02578 hydrolase
Probab=99.97 E-value=5.4e-30 Score=187.79 Aligned_cols=221 Identities=12% Similarity=0.074 Sum_probs=133.4
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++|+|+++|+||||.|+++.. .++.+.+++++.++++.+ ..++++++||||||.+++.+|.++|++|+++|++++..
T Consensus 110 ~~~~~v~~~D~~G~G~S~~~~~-~~~~~~~a~~l~~~i~~~-~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 110 AKKYKVYALDLLGFGWSDKALI-EYDAMVWRDQVADFVKEV-VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAG 187 (354)
T ss_pred hcCCEEEEECCCCCCCCCCccc-ccCHHHHHHHHHHHHHHh-ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCc
Confidence 3569999999999999998755 479999999999999999 78999999999999999999999999999999998754
Q ss_pred CCCCcchh---------hhhhh-hhhhcCCcccccccccC--CCCCCCC----------cccccchhHHHHHhh-cCCcc
Q 026718 84 PGPDLNIS---------TLNQE-SFSRQGPLLDCKYAYDD--GPDSPPT----------TFIFGPLYLKSTVYQ-LSPVE 140 (234)
Q Consensus 84 ~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~ 140 (234)
........ ..... ...............+. ....+.. ......+...+.... .....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (354)
T PLN02578 188 QFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPN 267 (354)
T ss_pred cccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCc
Confidence 32211100 00000 00000000000000000 0000000 000000000000000 00000
Q ss_pred cHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChH
Q 026718 141 DWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPL 220 (234)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~ 220 (234)
.................. .... ......++|+++|+|++|.+++.+..+.+.+.+|+.++++++ +||+++.|+|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~-~~~~---~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i~-~GH~~~~e~p~ 342 (354)
T PLN02578 268 AGEVYYRLMSRFLFNQSR-YTLD---SLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQ-AGHCPHDEVPE 342 (354)
T ss_pred hHHHHHHHHHHHhcCCCC-CCHH---HHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeC-CCCCccccCHH
Confidence 000000000000000000 0000 111233899999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHhh
Q 026718 221 ELWAHLLSIAG 231 (234)
Q Consensus 221 ~~~~~i~~fl~ 231 (234)
++++.|.+|++
T Consensus 343 ~~~~~I~~fl~ 353 (354)
T PLN02578 343 QVNKALLEWLS 353 (354)
T ss_pred HHHHHHHHHHh
Confidence 99999999986
No 24
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=3.2e-30 Score=184.48 Aligned_cols=219 Identities=20% Similarity=0.244 Sum_probs=135.5
Q ss_pred CceEEeecCCCCC-CCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeE---Eecc
Q 026718 6 GHNVTAFDLAASG-VEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAV---FVSA 81 (234)
Q Consensus 6 g~~vi~~D~~G~G-~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv---l~~~ 81 (234)
|++|+++|++|+| .|..+....|+..++++.+..++... ..++++++|||+||.+|+.+|+.+|+.|++++ ++++
T Consensus 86 ~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~-~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~ 164 (326)
T KOG1454|consen 86 GLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV-FVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGP 164 (326)
T ss_pred ceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-cCcceEEEEeCcHHHHHHHHHHhCcccccceeeeccccc
Confidence 5999999999999 55566666799999999999999998 78889999999999999999999999999999 5555
Q ss_pred CCCCCCcchhhhhhhhhhhc---CCcccccccccCCCCCCCCcccccchhHHHHHhh-cCCcccHHHHHHhcCcc--ccc
Q 026718 82 LKPGPDLNISTLNQESFSRQ---GPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQ-LSPVEDWALATMLMRPL--GLF 155 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~ 155 (234)
.................... ..+...... .+ ...+........... ................. ..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (326)
T KOG1454|consen 165 PVYSTPKGIKGLRRLLDKFLSALELLIPLSLT------EP--VRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHF 236 (326)
T ss_pred ccccCCcchhHHHHhhhhhccHhhhcCccccc------cc--hhheeHhhhcceeeeccccccchhhhhhheecccccch
Confidence 44333222111111111000 000000000 00 000000000000000 00000000000000000 000
Q ss_pred hhhh-------hhh--hhcccccccC-CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHH
Q 026718 156 SEED-------MSK--ELKLTWERYG-TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAH 225 (234)
Q Consensus 156 ~~~~-------~~~--~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 225 (234)
..+. +.. .......+.+ ++|+++++|++|+++|.+....+.+.+|++++++++++||.+++|.|+++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~ 316 (326)
T KOG1454|consen 237 HRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAAL 316 (326)
T ss_pred hhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHH
Confidence 0000 000 1111111222 59999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcc
Q 026718 226 LLSIAGNY 233 (234)
Q Consensus 226 i~~fl~~~ 233 (234)
|..|+..+
T Consensus 317 i~~Fi~~~ 324 (326)
T KOG1454|consen 317 LRSFIARL 324 (326)
T ss_pred HHHHHHHh
Confidence 99999864
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=9.5e-30 Score=181.30 Aligned_cols=214 Identities=12% Similarity=0.107 Sum_probs=129.6
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCcccceeEE
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVF 78 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 78 (234)
|.++||+|+++|+||||.|+.......++.++++|+.+.++.+ ....+++++||||||.+++.++.++|++++++|+
T Consensus 48 l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil 127 (276)
T PHA02857 48 ISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMIL 127 (276)
T ss_pred HHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEE
Confidence 4567999999999999999865433346777778877777654 1346899999999999999999999999999999
Q ss_pred eccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCc-----ccHHHHHHhcCccc
Q 026718 79 VSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPV-----EDWALATMLMRPLG 153 (234)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 153 (234)
++|................... ........ .....................+. ...........
T Consensus 128 ~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 196 (276)
T PHA02857 128 MSPLVNAEAVPRLNLLAAKLMG--IFYPNKIV------GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLK--- 196 (276)
T ss_pred eccccccccccHHHHHHHHHHH--HhCCCCcc------CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHH---
Confidence 9986542111111100000000 00000000 00000000000000000000000 00000000000
Q ss_pred cchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhC-CCCcEEEccCCCcceeecCh---HHHHHHHHHH
Q 026718 154 LFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRN-PPHQVEEIKDSDHMVMMSKP---LELWAHLLSI 229 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p---~~~~~~i~~f 229 (234)
... .........++|+++++|++|.++|++..+.+.+.+ +++++++++++||.++.|++ +++.+.+.+|
T Consensus 197 ------~~~-~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~ 269 (276)
T PHA02857 197 ------ATN-KVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETW 269 (276)
T ss_pred ------HHH-HHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHH
Confidence 000 001112233899999999999999999999998876 46899999999999999976 5688999999
Q ss_pred hhcc
Q 026718 230 AGNY 233 (234)
Q Consensus 230 l~~~ 233 (234)
+.+.
T Consensus 270 l~~~ 273 (276)
T PHA02857 270 IFNR 273 (276)
T ss_pred HHHh
Confidence 9864
No 26
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=1.6e-30 Score=180.15 Aligned_cols=202 Identities=22% Similarity=0.240 Sum_probs=130.1
Q ss_pred CCCceEEeecCCCCCCCCCCCC-CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVH-NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
++||+|+++|+||||.|+.+.. ..++++++++|+.++++++ +.++++++|||+||.+++.++.++|++|+++|++++.
T Consensus 22 ~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~ 100 (228)
T PF12697_consen 22 ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL-GIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPP 100 (228)
T ss_dssp HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT-TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc-ccccccccccccccccccccccccccccccceeeccc
Confidence 4799999999999999997653 3479999999999999999 7799999999999999999999999999999999987
Q ss_pred CCCCCcc----hhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhh
Q 026718 83 KPGPDLN----ISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEE 158 (234)
Q Consensus 83 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (234)
....... .......+............... ................ ............ ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~--- 164 (228)
T PF12697_consen 101 PPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRF-------FYRWFDGDEPEDLIRS-----SRRALAEYLRSN-LW--- 164 (228)
T ss_dssp SSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHTHHHHHHHHHH-----HHHHHHHHHHHH-HH---
T ss_pred ccccccccccccchhhhhhhhccccccccccccc-------cccccccccccccccc-----cccccccccccc-cc---
Confidence 6422111 00111111100000000000000 0000000000000000 000000000000 00
Q ss_pred hhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHH
Q 026718 159 DMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAH 225 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 225 (234)
...........++|+++++|++|.+++.+..+.+.+.++++++++++++||++++|+|++++++
T Consensus 165 ---~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 165 ---QADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp ---HHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred ---cccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 0000111222388999999999999999999999999999999999999999999999999874
No 27
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=1.1e-29 Score=178.01 Aligned_cols=209 Identities=12% Similarity=0.032 Sum_probs=123.9
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++|+|+++|+||||.|+... .++++++++++.+.+ .++++++||||||.+++.++.++|++++++|++++..
T Consensus 28 ~~~~~vi~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 28 SAHFTLHLVDLPGHGRSRGFG--PLSLADAAEAIAAQA-----PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred ccCeEEEEecCCcCccCCCCC--CcCHHHHHHHHHHhC-----CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 357999999999999987643 357888777765432 4789999999999999999999999999999998764
Q ss_pred CCCCcc-hh-h----hhhhhhhhcCCcccccccccCCCCCCCCcccccch---hHHHHHhhcCCcccHHHHHHhcCcccc
Q 026718 84 PGPDLN-IS-T----LNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPL---YLKSTVYQLSPVEDWALATMLMRPLGL 154 (234)
Q Consensus 84 ~~~~~~-~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (234)
...... .. . ....+..............+...... ....... .+...+...... ...........
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--- 174 (245)
T TIGR01738 101 CFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTL--GTPTARQDARALKQTLLARPTP-NVQVLQAGLEI--- 174 (245)
T ss_pred ccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh--cCCccchHHHHHHHHhhccCCC-CHHHHHHHHHH---
Confidence 322110 00 0 00000000000000000000000000 0000000 000000000000 00000000000
Q ss_pred chhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHh
Q 026718 155 FSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIA 230 (234)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 230 (234)
+...........+++|+++++|++|.+++++..+.+.+.++++++++++++||++++|+|+++++.|.+|+
T Consensus 175 -----~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 175 -----LATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred -----hhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 00000001122338899999999999999999999999999999999999999999999999999999986
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=9.2e-30 Score=178.98 Aligned_cols=213 Identities=15% Similarity=0.117 Sum_probs=133.3
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
++||+|+++|+||||.|+.+.. .++++++++++.++++.+ +.++++++||||||++++.+|.++|++++++|++++..
T Consensus 37 ~~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~-~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 37 TPDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDHL-GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAA 114 (251)
T ss_pred hcccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh-CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcc
Confidence 4689999999999999976544 479999999999999999 78899999999999999999999999999999998754
Q ss_pred CCCCcch-hhhhhhhhhh-cCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhh
Q 026718 84 PGPDLNI-STLNQESFSR-QGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMS 161 (234)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (234)
....... .......... ...........+....... ........+...+.... .......... +.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~ 181 (251)
T TIGR02427 115 KIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFRE-AHPARLDLYRNMLVRQP-PDGYAGCCAA-----------IR 181 (251)
T ss_pred ccCchhhHHHHHhhhhhccHHHHHHHHHHHHccccccc-CChHHHHHHHHHHHhcC-HHHHHHHHHH-----------Hh
Confidence 3221110 0000000000 0000000000000000000 00000000000000000 0000000000 00
Q ss_pred hhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 162 KELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 162 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
...........++|+++++|++|..+|.+..+.+.+.+++.++++++++||++++++|+++.+.|.+|++
T Consensus 182 ~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 182 DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 0000011122378999999999999999999999999999999999999999999999999999999974
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=1.6e-28 Score=178.45 Aligned_cols=221 Identities=11% Similarity=0.049 Sum_probs=131.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC-----CCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH-----NLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
|+++||+|+++|+||||.|+.+.. ..++++++++|+.++++.+ .+..+++++||||||.+++.++.++|+++
T Consensus 77 l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v 156 (330)
T PRK10749 77 LFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVF 156 (330)
T ss_pred HHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCc
Confidence 457899999999999999975422 2358999999999999875 14578999999999999999999999999
Q ss_pred ceeEEeccCCCCCCcchhhhhhh---hhhhcCCcccccccccCCCC-CCCCccc--ccchhHH---HHHhhcCCc----c
Q 026718 74 SVAVFVSALKPGPDLNISTLNQE---SFSRQGPLLDCKYAYDDGPD-SPPTTFI--FGPLYLK---STVYQLSPV----E 140 (234)
Q Consensus 74 ~~lvl~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~---~~~~~~~~~----~ 140 (234)
+++|+++|............... .................... ....... ..+.... +.+...... .
T Consensus 157 ~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (330)
T PRK10749 157 DAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGP 236 (330)
T ss_pred ceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCC
Confidence 99999998643211111111011 11100000000000000000 0000000 0011110 111111000 0
Q ss_pred cHHHHHHhcCccccchhhhhhhh-hcccccccCCccEEEEeeCCCccccHHHHHHHHHhC-------CCCcEEEccCCCc
Q 026718 141 DWALATMLMRPLGLFSEEDMSKE-LKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRN-------PPHQVEEIKDSDH 212 (234)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH 212 (234)
........ +... .........++|+|+|+|++|.+++++..+.+.+.+ +++++++++|+||
T Consensus 237 ~~~~~~~~-----------~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH 305 (330)
T PRK10749 237 TYHWVRES-----------ILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYH 305 (330)
T ss_pred cHHHHHHH-----------HHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcc
Confidence 00000000 1000 001112233789999999999999999888887765 3558999999999
Q ss_pred ceeecCh---HHHHHHHHHHhhcc
Q 026718 213 MVMMSKP---LELWAHLLSIAGNY 233 (234)
Q Consensus 213 ~~~~~~p---~~~~~~i~~fl~~~ 233 (234)
.++.|.+ +.+.+.|.+|++++
T Consensus 306 ~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 306 EILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999886 66888899999875
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=2.6e-29 Score=180.22 Aligned_cols=222 Identities=15% Similarity=0.117 Sum_probs=131.7
Q ss_pred CCCceEEeecCCCCCCCCCCCCC--CCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHN--LRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+.||+|+++|+||||.|+.+... .++++++++++.++++++ +.++++++||||||.+++.++.++|++++++|++++
T Consensus 51 ~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 51 EEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL-GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred hcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 34899999999999999876443 378999999999999999 788899999999999999999999999999999987
Q ss_pred CCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHh-h-cCCcccHHHHHH------------
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVY-Q-LSPVEDWALATM------------ 147 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~------------ 147 (234)
........ .................+......... ..... ......... . ............
T Consensus 130 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (288)
T TIGR01250 130 LDSAPEYV--KELNRLRKELPPEVRAAIKRCEASGDY-DNPEY-QEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNI 205 (288)
T ss_pred cccchHHH--HHHHHHHhhcChhHHHHHHHHHhccCc-chHHH-HHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhc
Confidence 54322110 000000000000000000000000000 00000 000000000 0 000000000000
Q ss_pred hcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHH
Q 026718 148 LMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLL 227 (234)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 227 (234)
............+............++|+++++|++|.+ +++..+.+.+.+++.++++++++||++++|+|+++++.|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 284 (288)
T TIGR01250 206 MQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLS 284 (288)
T ss_pred ccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHH
Confidence 000000000000000000111223479999999999985 5677888889999999999999999999999999999999
Q ss_pred HHhh
Q 026718 228 SIAG 231 (234)
Q Consensus 228 ~fl~ 231 (234)
+|++
T Consensus 285 ~fl~ 288 (288)
T TIGR01250 285 DFIR 288 (288)
T ss_pred HHhC
Confidence 9984
No 31
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=5.2e-29 Score=182.63 Aligned_cols=228 Identities=11% Similarity=0.024 Sum_probs=132.3
Q ss_pred CCCCCceEEeecCCC--CCCCCCC----C-------CCCCchhhhhhHHHHHHHhcCCCCc-eEEEeeChhHHHHHHHHH
Q 026718 2 IKSSGHNVTAFDLAA--SGVEPQQ----V-------HNLRSISDFFKPLIDFMAALPLDKK-VILVGHSYGGLAVAQSME 67 (234)
Q Consensus 2 l~~~g~~vi~~D~~G--~G~S~~~----~-------~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~ 67 (234)
|..++|+|+++|+|| ||.|... . ...++++++++++.++++++ +.++ ++++||||||++++.++.
T Consensus 68 l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~l~G~S~Gg~ia~~~a~ 146 (351)
T TIGR01392 68 IDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL-GIEQIAAVVGGSMGGMQALEWAI 146 (351)
T ss_pred cCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHHHHHHHHH
Confidence 346789999999999 5655421 1 12478999999999999999 8888 999999999999999999
Q ss_pred hCCcccceeEEeccCCCCCCcchhhhhhhhhhh---cCCcccccccccCCCCCCC-C------cccccchhHHHHHhhcC
Q 026718 68 RFPNKISVAVFVSALKPGPDLNISTLNQESFSR---QGPLLDCKYAYDDGPDSPP-T------TFIFGPLYLKSTVYQLS 137 (234)
Q Consensus 68 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~ 137 (234)
++|++|+++|++++.......... ........ ...+....+.....+.... . ........+...+....
T Consensus 147 ~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 225 (351)
T TIGR01392 147 DYPERVRAIVVLATSARHSAWCIA-FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAP 225 (351)
T ss_pred HChHhhheEEEEccCCcCCHHHHH-HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCc
Confidence 999999999999986543321111 10000000 0000000000000000000 0 00000011111111000
Q ss_pred Ccc-----------cHHHHH-----HhcC-cccc-chh--hhhhhh-------hcccccccCCccEEEEeeCCCccccHH
Q 026718 138 PVE-----------DWALAT-----MLMR-PLGL-FSE--EDMSKE-------LKLTWERYGTVRRVYIISEKDLVTEKD 190 (234)
Q Consensus 138 ~~~-----------~~~~~~-----~~~~-~~~~-~~~--~~~~~~-------~~~~~~~~~~~P~l~i~g~~D~~~~~~ 190 (234)
... ...... .... .... +.. ..+... ........+++|+++|+|++|.++|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~ 305 (351)
T TIGR01392 226 QSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPA 305 (351)
T ss_pred ccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHH
Confidence 000 000000 0000 0000 000 000000 001112234789999999999999999
Q ss_pred HHHHHHHhCCCCcEE-----EccCCCcceeecChHHHHHHHHHHhh
Q 026718 191 LAMWMIKRNPPHQVE-----EIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 191 ~~~~~~~~~~~~~~~-----~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
..+.+++.+++++++ +++++||++++|+|++|++.|.+|++
T Consensus 306 ~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 306 ESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 999999999988765 56789999999999999999999985
No 32
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=7.5e-29 Score=173.57 Aligned_cols=209 Identities=14% Similarity=0.007 Sum_probs=121.1
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcc-cceeEEeccCCC
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNK-ISVAVFVSALKP 84 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~ 84 (234)
+|+|+++|+||||.|+.+.. .+++++++++.++++++ +.++++++||||||.+++.+|.++|+. |++++++++...
T Consensus 27 ~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~-~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~ 103 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSY-NILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG 103 (242)
T ss_pred CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHc-CCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC
Confidence 69999999999999987654 48999999999999999 889999999999999999999999764 999999886543
Q ss_pred CCCcchh--hhh--hhhhhhcC-CcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhh
Q 026718 85 GPDLNIS--TLN--QESFSRQG-PLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEED 159 (234)
Q Consensus 85 ~~~~~~~--~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (234)
....... ... ..+..... ......+..+.. .. .................. ................
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----- 174 (242)
T PRK11126 104 LQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQ--QP-VFASLNAEQRQQLVAKRS-NNNGAAVAAMLEATSL----- 174 (242)
T ss_pred CCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHh--cc-hhhccCccHHHHHHHhcc-cCCHHHHHHHHHhcCc-----
Confidence 2211100 000 00000000 000000000000 00 000000000000000000 0000000000000000
Q ss_pred hhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 160 MSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 160 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
.............++|+++|+|++|..+. .+.+. .++++++++++||++++|+|+++++.|..|+++
T Consensus 175 ~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 175 AKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred ccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 00000001112238899999999998653 22333 378999999999999999999999999999975
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=9.8e-28 Score=168.56 Aligned_cols=219 Identities=17% Similarity=0.074 Sum_probs=129.0
Q ss_pred CCceEEeecCCCCCCCCCCCC-CCCchhhhhhH-HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 5 SGHNVTAFDLAASGVEPQQVH-NLRSISDFFKP-LIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~-l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+||+|+++|+||||.|+.+.. ..+++++.+++ +..+++.+ +.++++++||||||.+++.++.++|++|++++++++.
T Consensus 26 ~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~ 104 (251)
T TIGR03695 26 PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL-GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGS 104 (251)
T ss_pred ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc-CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCC
Confidence 789999999999999987543 45789999999 77888888 7889999999999999999999999999999999876
Q ss_pred CCCCCcchhhhh-h---hhhhhcC-CcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchh
Q 026718 83 KPGPDLNISTLN-Q---ESFSRQG-PLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSE 157 (234)
Q Consensus 83 ~~~~~~~~~~~~-~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (234)
............ . ....... .........+........................................ .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 180 (251)
T TIGR03695 105 PGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATG-L--- 180 (251)
T ss_pred CCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhh-h---
Confidence 432211100000 0 0000000 00000000000000000000000000000000000000000000000000 0
Q ss_pred hhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 158 EDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 158 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
.............++|+++++|++|..++ +..+.+.+..++.++++++++||++++++|+++++.|.+|++
T Consensus 181 --~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 181 --GKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred --hcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 00000001122348999999999998764 566778888899999999999999999999999999999984
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=7.7e-28 Score=177.69 Aligned_cols=226 Identities=11% Similarity=0.047 Sum_probs=131.4
Q ss_pred CCCceEEeecCCCC-CCCCCCCC-------------CCCchhhhhhHHHHHHHhcCCCCc-eEEEeeChhHHHHHHHHHh
Q 026718 4 SSGHNVTAFDLAAS-GVEPQQVH-------------NLRSISDFFKPLIDFMAALPLDKK-VILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 4 ~~g~~vi~~D~~G~-G~S~~~~~-------------~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~ 68 (234)
.++|+||++|++|+ |.|+.+.. ..++++++++++.++++++ +.++ ++++||||||++++.+|.+
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~~lvG~S~Gg~ia~~~a~~ 167 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL-GITRLAAVVGGSMGGMQALEWAID 167 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh-CCCCceEEEEECHHHHHHHHHHHh
Confidence 56899999999993 54543210 1479999999999999999 8888 5999999999999999999
Q ss_pred CCcccceeEEeccCCCCCCcchhh--hhhhhhhhcCCcccccc-----------------------------cccCCCCC
Q 026718 69 FPNKISVAVFVSALKPGPDLNIST--LNQESFSRQGPLLDCKY-----------------------------AYDDGPDS 117 (234)
Q Consensus 69 ~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~ 117 (234)
+|++|+++|++++........... ...........+....+ ..+.....
T Consensus 168 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~ 247 (379)
T PRK00175 168 YPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQ 247 (379)
T ss_pred ChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcccc
Confidence 999999999999765433211100 00000000000000000 00000000
Q ss_pred CCCc-ccccchh-HHH-------HHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCcccc
Q 026718 118 PPTT-FIFGPLY-LKS-------TVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTE 188 (234)
Q Consensus 118 ~~~~-~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~ 188 (234)
.... ....... ... ......................... ............+++|+|+|+|++|.++|
T Consensus 248 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~---~~~~d~~~~l~~I~~PtLvI~G~~D~~~p 324 (379)
T PRK00175 248 SGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPAR---GRGGDLAAALARIKARFLVVSFTSDWLFP 324 (379)
T ss_pred ccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccC---CCCCCHHHHHhcCCCCEEEEEECCccccC
Confidence 0000 0000000 000 0000000000000000000000000 00000001122348899999999999999
Q ss_pred HHHHHHHHHhCCCC----cEEEcc-CCCcceeecChHHHHHHHHHHhhcc
Q 026718 189 KDLAMWMIKRNPPH----QVEEIK-DSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 189 ~~~~~~~~~~~~~~----~~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
++..+.+++.++++ ++++++ ++||++++|+|++|++.|.+|+.+.
T Consensus 325 ~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 325 PARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 99999999999886 677774 8999999999999999999999763
No 35
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=2.4e-28 Score=165.98 Aligned_cols=216 Identities=14% Similarity=0.068 Sum_probs=142.7
Q ss_pred CCCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc-----CCCCceEEEeeChhHHHHHHHHHhCCcccce
Q 026718 1 MIKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL-----PLDKKVILVGHSYGGLAVAQSMERFPNKISV 75 (234)
Q Consensus 1 ~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 75 (234)
+|+..||.|+++|++|||.|++......+++..++|+.++.+.. ....+.+|+||||||.+++.++.+.|+..++
T Consensus 77 ~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G 156 (313)
T KOG1455|consen 77 RLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDG 156 (313)
T ss_pred HHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCccccc
Confidence 36788999999999999999998888889999999999999864 2456899999999999999999999999999
Q ss_pred eEEeccCCCCCCcchhh-----hhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcC----CcccHHHHH
Q 026718 76 AVFVSALKPGPDLNIST-----LNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLS----PVEDWALAT 146 (234)
Q Consensus 76 lvl~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 146 (234)
+|+++|.+......... ....+...++.|.. .+........+...........+. .........
T Consensus 157 ~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~-------vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ 229 (313)
T KOG1455|consen 157 AILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKI-------VPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAY 229 (313)
T ss_pred ceeeecccccCCccCCCcHHHHHHHHHHHhCCceee-------cCCccccccccCCHHHHHHhhcCCceecCCccHHHHH
Confidence 99999987655433221 11222222222220 000000011111111111111111 111122222
Q ss_pred HhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceee-c---ChH
Q 026718 147 MLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMM-S---KPL 220 (234)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~---~p~ 220 (234)
.+++..... . ......++|.+++||+.|.++.+..++.+.+..+ +.++..+||.-|.++. | +-+
T Consensus 230 ElLr~~~~l-------e---~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e 299 (313)
T KOG1455|consen 230 ELLRVTADL-------E---KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVE 299 (313)
T ss_pred HHHHHHHHH-------H---HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHH
Confidence 222211110 0 1112237899999999999999999999998875 6799999999999886 3 336
Q ss_pred HHHHHHHHHhhcc
Q 026718 221 ELWAHLLSIAGNY 233 (234)
Q Consensus 221 ~~~~~i~~fl~~~ 233 (234)
.+...|.+||++.
T Consensus 300 ~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 300 IVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHHHHhc
Confidence 6778888998764
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=2.1e-27 Score=168.49 Aligned_cols=220 Identities=18% Similarity=0.171 Sum_probs=136.9
Q ss_pred CCCCCceEEeecCCCCCCCC-CCCCCCCchhhhhhHHHHHHHhcC---CCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 2 IKSSGHNVTAFDLAASGVEP-QQVHNLRSISDFFKPLIDFMAALP---LDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~-~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
|..+||.|+++|+||||.|. +..+...++.++.+|+.++++... ...+++++||||||.+++.++.+++.+++++|
T Consensus 57 l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~v 136 (298)
T COG2267 57 LAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLV 136 (298)
T ss_pred HHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEE
Confidence 56789999999999999998 666666789999999999999872 35799999999999999999999999999999
Q ss_pred EeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCC---CCCCcccccchhHHHHHhhcCCc-----ccHHHHHHhc
Q 026718 78 FVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPD---SPPTTFIFGPLYLKSTVYQLSPV-----EDWALATMLM 149 (234)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 149 (234)
+.+|.................. .........+.... .........+.......+...+. ....+.....
T Consensus 137 LssP~~~l~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~ 213 (298)
T COG2267 137 LSSPALGLGGAILRLILARLAL---KLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLAL 213 (298)
T ss_pred EECccccCChhHHHHHHHHHhc---ccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHH
Confidence 9999875543000001111100 11111111111000 00001111111111111111111 0111111111
Q ss_pred CccccchhhhhhhhhcccccccCCccEEEEeeCCCcccc-HHHHHHHHHhC--CCCcEEEccCCCcceeecC-h--HHHH
Q 026718 150 RPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTE-KDLAMWMIKRN--PPHQVEEIKDSDHMVMMSK-P--LELW 223 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~-p--~~~~ 223 (234)
... . ..........++|+|+++|++|.+++ .+...++.+.. +++++++++|+.|.++.|. . +++.
T Consensus 214 ~a~--------~-~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~ 284 (298)
T COG2267 214 LAG--------R-VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVL 284 (298)
T ss_pred Hhh--------c-ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHH
Confidence 000 0 00111123338899999999999999 67766666654 4678999999999999874 4 7888
Q ss_pred HHHHHHhhcc
Q 026718 224 AHLLSIAGNY 233 (234)
Q Consensus 224 ~~i~~fl~~~ 233 (234)
+.+.+|+.++
T Consensus 285 ~~~~~~l~~~ 294 (298)
T COG2267 285 KDILAWLAEA 294 (298)
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=4e-27 Score=174.53 Aligned_cols=219 Identities=17% Similarity=0.178 Sum_probs=122.8
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCch----hhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSI----SDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~----~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
++|+|+++|+||||.|+.+.....+. +.+++++.++++.+ +.++++++||||||.+++.+|.++|++|+++|+++
T Consensus 130 ~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l-~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~ 208 (402)
T PLN02894 130 SRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK-NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVG 208 (402)
T ss_pred hCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc-CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEEC
Confidence 46999999999999998754321122 23567788888888 78899999999999999999999999999999999
Q ss_pred cCCCCCCcchh-hhhhhhhhhcCCcccccccc----cCCCC-----CCCCcccccchhHHHHHhhc-----CCcccHHHH
Q 026718 81 ALKPGPDLNIS-TLNQESFSRQGPLLDCKYAY----DDGPD-----SPPTTFIFGPLYLKSTVYQL-----SPVEDWALA 145 (234)
Q Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 145 (234)
|.......... ........ .+....+.. ...+. ................+... .........
T Consensus 209 p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 285 (402)
T PLN02894 209 PAGFSSESDDKSEWLTKFRA---TWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLL 285 (402)
T ss_pred CccccCCcchhHHHHhhcch---hHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHH
Confidence 76533211110 00000000 000000000 00000 00000000000000000000 000000000
Q ss_pred -----------------HHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhC-CCCcEEEc
Q 026718 146 -----------------TMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRN-PPHQVEEI 207 (234)
Q Consensus 146 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~ 207 (234)
......... ............+++|+++|+|++|.+.+ .....+.+.. +.++++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i 359 (402)
T PLN02894 286 TDYVYHTLAAKASGELCLKYIFSFGA-----FARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRV 359 (402)
T ss_pred HHHHHHhhcCCCchHHHHHHhccCch-----hhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEe
Confidence 000000000 00000111122237899999999998766 4444555554 35799999
Q ss_pred cCCCcceeecChHHHHHHHHHHhhcc
Q 026718 208 KDSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 208 ~~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
+++||+++.|+|++|++.|.+|++.|
T Consensus 360 ~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 360 PQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred CCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 99999999999999999999998754
No 38
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=2e-26 Score=169.55 Aligned_cols=215 Identities=14% Similarity=0.062 Sum_probs=130.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC---CCCceEEEeeChhHHHHHHHHHhCCc---ccce
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP---LDKKVILVGHSYGGLAVAQSMERFPN---KISV 75 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~ 75 (234)
|+++||+|+++|+||||.|+.......+++.+++|+.++++.+. ...+++++||||||.+++.++. +|+ ++++
T Consensus 159 L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~g 237 (395)
T PLN02652 159 LTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEG 237 (395)
T ss_pred HHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccce
Confidence 45789999999999999998876555688899999999999872 2347999999999999998764 564 8999
Q ss_pred eEEeccCCCCCCcch-hhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCC-c--ccHHHHHHhcCc
Q 026718 76 AVFVSALKPGPDLNI-STLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSP-V--EDWALATMLMRP 151 (234)
Q Consensus 76 lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 151 (234)
+|+.+|......... ......+... ........... .........+......+..... . .........
T Consensus 238 lVL~sP~l~~~~~~~~~~~~~~l~~~---~~p~~~~~~~~--~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~--- 309 (395)
T PLN02652 238 IVLTSPALRVKPAHPIVGAVAPIFSL---VAPRFQFKGAN--KRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEI--- 309 (395)
T ss_pred EEEECcccccccchHHHHHHHHHHHH---hCCCCcccCcc--cccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHH---
Confidence 999988653221111 0011111110 00000000000 0000000011111111100000 0 000000000
Q ss_pred cccchhhhhhhhh-cccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeec-ChHHHHHHHH
Q 026718 152 LGLFSEEDMSKEL-KLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMS-KPLELWAHLL 227 (234)
Q Consensus 152 ~~~~~~~~~~~~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~p~~~~~~i~ 227 (234)
+.... .......+++|+|+++|++|.++|++.++++.+..+ +.+++++++++|.++.| +++++.+.|.
T Consensus 310 --------~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~ 381 (395)
T PLN02652 310 --------LRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDII 381 (395)
T ss_pred --------HHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHH
Confidence 00000 011122337999999999999999999999988765 46899999999999887 7899999999
Q ss_pred HHhhcc
Q 026718 228 SIAGNY 233 (234)
Q Consensus 228 ~fl~~~ 233 (234)
+|++.+
T Consensus 382 ~FL~~~ 387 (395)
T PLN02652 382 DWMEKR 387 (395)
T ss_pred HHHHHH
Confidence 999753
No 39
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.95 E-value=2e-28 Score=170.23 Aligned_cols=213 Identities=18% Similarity=0.121 Sum_probs=128.8
Q ss_pred ceEEeecCCCCCCCCC---CCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 7 HNVTAFDLAASGVEPQ---QVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 7 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
|+|+++|+||+|.|+. .....++..++++++..+++.+ +.++++++||||||.+++.++..+|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL-GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH-TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh-CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999995 4556689999999999999999 88889999999999999999999999999999999863
Q ss_pred CCCCcchhhhhh--hhhhhcCCcccc-cccccCCCCCCCCccccc--chhHHHHHhhcCCcccHHHHHHhcCc------c
Q 026718 84 PGPDLNISTLNQ--ESFSRQGPLLDC-KYAYDDGPDSPPTTFIFG--PLYLKSTVYQLSPVEDWALATMLMRP------L 152 (234)
Q Consensus 84 ~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 152 (234)
............ ............ ...... . ...... .......... ....... ....... .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ 152 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIK----P-LLGRWPKQFFAYDREFVE-DFLKQFQ-SQQYARFAETDAFD 152 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHH-THHHHHH-HHHHHHTCHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccch----h-hhhhhhhheeeccCcccc-chhhccc-hhhhhHHHHHHHHh
Confidence 000000000000 000000000000 000000 0 000000 0000000000 0000000 0000000 0
Q ss_pred ccch--hhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHH
Q 026718 153 GLFS--EEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLL 227 (234)
Q Consensus 153 ~~~~--~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 227 (234)
.... ...............+++|+++++|++|.++|++....+.+.+|+.++++++++||+.++++|+++++.|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 153 NMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0000 00011111111122358999999999999999999999999999999999999999999999999999875
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=1.9e-26 Score=171.07 Aligned_cols=211 Identities=17% Similarity=0.157 Sum_probs=127.9
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
++|+|+++|+||||.|..... ..++.++++++.++++.+ +..+++++||||||.+++.+|..+|+++.++|++++...
T Consensus 156 ~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~ 233 (371)
T PRK14875 156 AGRPVIALDLPGHGASSKAVG-AGSLDELAAAVLAFLDAL-GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGL 233 (371)
T ss_pred cCCEEEEEcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhc-CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCc
Confidence 459999999999999965443 368999999999999999 778999999999999999999999999999999987643
Q ss_pred CCCcchhhhhhhhhhhc-CCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcc---cHHHH-HHhcCccccchhhh
Q 026718 85 GPDLNISTLNQESFSRQ-GPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVE---DWALA-TMLMRPLGLFSEED 159 (234)
Q Consensus 85 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~ 159 (234)
...... .....+.... ...+...+..... . .................... ..... ..........
T Consensus 234 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 303 (371)
T PRK14875 234 GPEING-DYIDGFVAAESRRELKPVLELLFA--D---PALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQR---- 303 (371)
T ss_pred Ccccch-hHHHHhhcccchhHHHHHHHHHhc--C---hhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccc----
Confidence 221110 0000000000 0000000000000 0 00011111111111000000 00000 0000000000
Q ss_pred hhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhcc
Q 026718 160 MSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 160 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
... .......++|+++++|++|.++|++..+.+ .++.++++++++||++++++|+++++.|.+|++++
T Consensus 304 ~~~---~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 304 VDL---RDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred hhH---HHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 000 011122389999999999999998765543 34679999999999999999999999999999763
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=7.6e-26 Score=163.15 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=71.5
Q ss_pred CCCCceEEeecCCCCCCCCCCCC-CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 3 KSSGHNVTAFDLAASGVEPQQVH-NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
...+|+|+++|+||||.|+.+.. ..++.+++++|+..+++++ +.++++++||||||.+++.++.++|++|+++|++++
T Consensus 50 ~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l-~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 50 DPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL-GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred CccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 34689999999999999986542 2367889999999999999 888999999999999999999999999999999987
Q ss_pred CCC
Q 026718 82 LKP 84 (234)
Q Consensus 82 ~~~ 84 (234)
...
T Consensus 129 ~~~ 131 (306)
T TIGR01249 129 FLL 131 (306)
T ss_pred ccC
Confidence 654
No 42
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=4.4e-26 Score=167.12 Aligned_cols=226 Identities=13% Similarity=0.074 Sum_probs=134.6
Q ss_pred CCCCCceEEeecCCCCCCCCCC--------------------CCCCCchhhhhhHHHHHHHhcCCCCceE-EEeeChhHH
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQ--------------------VHNLRSISDFFKPLIDFMAALPLDKKVI-LVGHSYGGL 60 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~--------------------~~~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~ 60 (234)
|....|.||++|..|-|.|..| ..+.++++++++++.++++++ +.+++. ++||||||+
T Consensus 95 lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l-gi~~~~~vvG~SmGG~ 173 (389)
T PRK06765 95 IDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL-GIARLHAVMGPSMGGM 173 (389)
T ss_pred cCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc-CCCCceEEEEECHHHH
Confidence 4456799999999998753211 123479999999999999999 889886 999999999
Q ss_pred HHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhh---hcCCcccccccccCCCCC-------CCCcccccchhHH
Q 026718 61 AVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFS---RQGPLLDCKYAYDDGPDS-------PPTTFIFGPLYLK 130 (234)
Q Consensus 61 ~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 130 (234)
+++++|.++|++|+++|++++.................. ..+.|....+.....+.. ........++++.
T Consensus 174 ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~ 253 (389)
T PRK06765 174 QAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYE 253 (389)
T ss_pred HHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999987654332220111111111 111111111100000000 0000001111111
Q ss_pred HHHhhc-------------------------------CCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEE
Q 026718 131 STVYQL-------------------------------SPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYI 179 (234)
Q Consensus 131 ~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 179 (234)
..+... .................... . ..........+++|+++|
T Consensus 254 ~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~---~-~~dl~~~L~~I~~PtLvI 329 (389)
T PRK06765 254 TTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGH---G-FSSLEEALSNIEANVLMI 329 (389)
T ss_pred HHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCcc---c-cCCHHHHHhcCCCCEEEE
Confidence 111110 00000000000000000000 0 000011122338899999
Q ss_pred eeCCCccccHHHHHHHHHhCC----CCcEEEccC-CCcceeecChHHHHHHHHHHhhc
Q 026718 180 ISEKDLVTEKDLAMWMIKRNP----PHQVEEIKD-SDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 180 ~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~-~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
+|++|.++|++..+.+.+.++ +++++++++ +||++++++|+++++.|.+|+++
T Consensus 330 ~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 330 PCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999999999999998988886 578999985 89999999999999999999964
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.94 E-value=7.5e-26 Score=164.10 Aligned_cols=212 Identities=14% Similarity=0.187 Sum_probs=125.9
Q ss_pred CCCCCceEEeecCCCCCCCCCC---CCCCCchhhhhhHHHHHHHhcC----------------------C-CCceEEEee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQ---VHNLRSISDFFKPLIDFMAALP----------------------L-DKKVILVGH 55 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~---~~~~~~~~~~~~~l~~~l~~~~----------------------~-~~~~~lvGh 55 (234)
|.++||+|+++|+||||.|... .....+++++++|+.++++.+. . ..|++|+||
T Consensus 70 l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~Gh 149 (332)
T TIGR01607 70 FNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGL 149 (332)
T ss_pred HHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeec
Confidence 4578999999999999999864 2223489999999999998641 1 458999999
Q ss_pred ChhHHHHHHHHHhCCc--------ccceeEEeccCCCCCCc------chhhhhhhhhhhcCCcccccccccCCCCCCCCc
Q 026718 56 SYGGLAVAQSMERFPN--------KISVAVFVSALKPGPDL------NISTLNQESFSRQGPLLDCKYAYDDGPDSPPTT 121 (234)
Q Consensus 56 S~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (234)
||||.+++.++..+++ .++++|+++|....... ........+...+..+... ....... .
T Consensus 150 SmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~----~~~~~~~--~ 223 (332)
T TIGR01607 150 SMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPT----FRISKKI--R 223 (332)
T ss_pred cCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCc----ccccCcc--c
Confidence 9999999999876643 58899988876422110 0000000111000000000 0000000 0
Q ss_pred ccccchhHHHHHhhcC----CcccHHHHHHhcCccccchhhhhhhhhcc-ccccc--CCccEEEEeeCCCccccHHHHHH
Q 026718 122 FIFGPLYLKSTVYQLS----PVEDWALATMLMRPLGLFSEEDMSKELKL-TWERY--GTVRRVYIISEKDLVTEKDLAMW 194 (234)
Q Consensus 122 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~P~l~i~g~~D~~~~~~~~~~ 194 (234)
....+. ..+....+. ..........+.. ..... ..... .++|+++|+|++|.+++++..+.
T Consensus 224 ~~~~~~-~~~~~~~Dp~~~~~~~s~~~~~~l~~-----------~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 224 YEKSPY-VNDIIKFDKFRYDGGITFNLASELIK-----------ATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred cccChh-hhhHHhcCccccCCcccHHHHHHHHH-----------HHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 000000 111111100 0001111111111 00000 00111 16899999999999999998888
Q ss_pred HHHhC--CCCcEEEccCCCcceeecC-hHHHHHHHHHHhh
Q 026718 195 MIKRN--PPHQVEEIKDSDHMVMMSK-PLELWAHLLSIAG 231 (234)
Q Consensus 195 ~~~~~--~~~~~~~~~~~gH~~~~~~-p~~~~~~i~~fl~ 231 (234)
+.+.. ++.+++++++++|.++.|. ++++.+.|.+|++
T Consensus 292 ~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 292 FYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 87765 4689999999999999885 6889999999986
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=4.4e-26 Score=192.24 Aligned_cols=219 Identities=17% Similarity=0.115 Sum_probs=128.0
Q ss_pred CCceEEeecCCCCCCCCCCC-------CCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 5 SGHNVTAFDLAASGVEPQQV-------HNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
.+|+|+++|+||||.|+... ...++++++++++.++++++ +.++++++||||||.+++.++.++|++|+++|
T Consensus 1396 ~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l-~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lV 1474 (1655)
T PLN02980 1396 GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI-TPGKVTLVGYSMGARIALYMALRFSDKIEGAV 1474 (1655)
T ss_pred CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-CCCCEEEEEECHHHHHHHHHHHhChHhhCEEE
Confidence 46999999999999997543 12468999999999999999 88999999999999999999999999999999
Q ss_pred EeccCCCCCCcchhhhhhhhhhhcCCcc-----cccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCcc
Q 026718 78 FVSALKPGPDLNISTLNQESFSRQGPLL-----DCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPL 152 (234)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
++++.......................+ ......+...... ........+.......................
T Consensus 1475 lis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 1552 (1655)
T PLN02980 1475 IISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELW--KSLRNHPHFNKIVASRLLHKDVPSLAKLLSDL 1552 (1655)
T ss_pred EECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHh--hhhccCHHHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 9987543221111000000000000000 0000000000000 00000000000000000000000000000000
Q ss_pred ccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCC------------CcEEEccCCCcceeecChH
Q 026718 153 GLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPP------------HQVEEIKDSDHMVMMSKPL 220 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~p~ 220 (234)
.. .............++|+|+|+|++|..++ +..+++.+.+++ +++++++++||++++|+|+
T Consensus 1553 ~~-----~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe 1626 (1655)
T PLN02980 1553 SI-----GRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPL 1626 (1655)
T ss_pred hh-----cccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHH
Confidence 00 00000001122337899999999999875 556667776665 4899999999999999999
Q ss_pred HHHHHHHHHhhc
Q 026718 221 ELWAHLLSIAGN 232 (234)
Q Consensus 221 ~~~~~i~~fl~~ 232 (234)
++++.|.+|+++
T Consensus 1627 ~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1627 PVIRALRKFLTR 1638 (1655)
T ss_pred HHHHHHHHHHHh
Confidence 999999999975
No 45
>PLN02511 hydrolase
Probab=99.94 E-value=3.3e-27 Score=174.34 Aligned_cols=220 Identities=13% Similarity=0.012 Sum_probs=124.6
Q ss_pred CCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC---CCCceEEEeeChhHHHHHHHHHhCCcc--cceeE
Q 026718 3 KSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP---LDKKVILVGHSYGGLAVAQSMERFPNK--ISVAV 77 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lv 77 (234)
.++||+|+++|+||||.|+..... .....+++|+.++++++. ...+++++||||||.+++.++.++|++ |.+++
T Consensus 126 ~~~g~~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v 204 (388)
T PLN02511 126 RSKGWRVVVFNSRGCADSPVTTPQ-FYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAV 204 (388)
T ss_pred HHCCCEEEEEecCCCCCCCCCCcC-EEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEE
Confidence 468999999999999999864332 234577888888888871 236899999999999999999999987 88888
Q ss_pred EeccCCCCCCcchhhhhhhh----hhhcCCcccccccccCC-CCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCcc
Q 026718 78 FVSALKPGPDLNISTLNQES----FSRQGPLLDCKYAYDDG-PDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPL 152 (234)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
+++++..... ........+ ...+...+......... .... ...+... ....... ............
T Consensus 205 ~is~p~~l~~-~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~--~~~fd~~~t~~~ 275 (388)
T PLN02511 205 SLCNPFDLVI-ADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGL--GGEYNIP----LVANAKT--VRDFDDGLTRVS 275 (388)
T ss_pred EECCCcCHHH-HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCccCHH----HHHhCCC--HHHHHHhhhhhc
Confidence 8876442110 000000000 00000000000000000 0000 0000000 0000000 000000000000
Q ss_pred ccchh-hh-hhhhhcccccccCCccEEEEeeCCCccccHHHH-HHHHHhCCCCcEEEccCCCcceeecChHH------HH
Q 026718 153 GLFSE-ED-MSKELKLTWERYGTVRRVYIISEKDLVTEKDLA-MWMIKRNPPHQVEEIKDSDHMVMMSKPLE------LW 223 (234)
Q Consensus 153 ~~~~~-~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~p~~------~~ 223 (234)
..+.. .. +...........+++|+++|+|++|+++|.+.. ....+..+++++++++++||+.++|+|+. +.
T Consensus 276 ~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~ 355 (388)
T PLN02511 276 FGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTD 355 (388)
T ss_pred CCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHH
Confidence 00000 00 111111122333488999999999999998754 45677889999999999999999999976 48
Q ss_pred HHHHHHhhc
Q 026718 224 AHLLSIAGN 232 (234)
Q Consensus 224 ~~i~~fl~~ 232 (234)
+.|.+|++.
T Consensus 356 ~~i~~Fl~~ 364 (388)
T PLN02511 356 PVVMEFLEA 364 (388)
T ss_pred HHHHHHHHH
Confidence 899999864
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.94 E-value=3.5e-26 Score=157.93 Aligned_cols=212 Identities=17% Similarity=0.158 Sum_probs=135.2
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC---CCCceEEEeeChhH-HHHHHHHHhCCcccceeEEecc
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP---LDKKVILVGHSYGG-LAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg-~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+-.|+++|.|.||.|+.... .+..++++|+..+|+... ...+++++|||||| .+++..+...|+.+.++|+++.
T Consensus 80 ~~~v~~vd~RnHG~Sp~~~~--h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~ 157 (315)
T KOG2382|consen 80 GRDVYAVDVRNHGSSPKITV--HNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDI 157 (315)
T ss_pred cCceEEEecccCCCCccccc--cCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEec
Confidence 45899999999999988765 579999999999999983 36799999999999 7888888899999999999986
Q ss_pred CCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcc-cHHHHHHhcCc---cccch-
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVE-DWALATMLMRP---LGLFS- 156 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~- 156 (234)
.+...+.+.....+-+......-.. ... .-.+....+.+....... ...+....++. ...+.
T Consensus 158 sP~~~~~~~~e~~e~i~~m~~~d~~--~~~-----------~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w 224 (315)
T KOG2382|consen 158 SPGGVGRSYGEYRELIKAMIQLDLS--IGV-----------SRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLW 224 (315)
T ss_pred CCccCCcccchHHHHHHHHHhcccc--ccc-----------cccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEE
Confidence 6533322222222111110000000 000 000111111111111010 11111111110 00000
Q ss_pred ----hh--h-hhh------hhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHH
Q 026718 157 ----EE--D-MSK------ELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELW 223 (234)
Q Consensus 157 ----~~--~-~~~------~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 223 (234)
.. . +.. ...+....+ ..||+++.|.++..++.+....+.+.+|++++++++++||+++.|+|++|.
T Consensus 225 ~~nl~~i~~~~~~~~~~s~~~~l~~~~~-~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~ 303 (315)
T KOG2382|consen 225 RVNLDSIASLLDEYEILSYWADLEDGPY-TGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFI 303 (315)
T ss_pred EeCHHHHHHHHHHHHhhccccccccccc-ccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHH
Confidence 00 0 001 111111222 679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcc
Q 026718 224 AHLLSIAGNY 233 (234)
Q Consensus 224 ~~i~~fl~~~ 233 (234)
+.|.+|+...
T Consensus 304 ~~i~~Fl~~~ 313 (315)
T KOG2382|consen 304 ESISEFLEEP 313 (315)
T ss_pred HHHHHHhccc
Confidence 9999998764
No 47
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.92 E-value=1e-25 Score=143.98 Aligned_cols=203 Identities=13% Similarity=0.058 Sum_probs=135.0
Q ss_pred CceEEeecCCCCCCCCCCCCC--CCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 6 GHNVTAFDLAASGVEPQQVHN--LRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++|+++|.||+|.|..|... ..-+...+++..++++.+ ..+++.++|+|=||..++..|+++++.|.++|+.++..
T Consensus 71 ~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~a 149 (277)
T KOG2984|consen 71 QVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAA 149 (277)
T ss_pred ceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccc
Confidence 389999999999999776542 123445566677888899 99999999999999999999999999999999998765
Q ss_pred CCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhc-Cccccchhhhhhh
Q 026718 84 PGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLM-RPLGLFSEEDMSK 162 (234)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 162 (234)
........ .++.+.. ...|..... .+....+.++.+........ ....... .....+..
T Consensus 150 yvn~~~~m-a~kgiRd-v~kWs~r~R--------~P~e~~Yg~e~f~~~wa~wv-----D~v~qf~~~~dG~fCr----- 209 (277)
T KOG2984|consen 150 YVNHLGAM-AFKGIRD-VNKWSARGR--------QPYEDHYGPETFRTQWAAWV-----DVVDQFHSFCDGRFCR----- 209 (277)
T ss_pred eecchhHH-HHhchHH-Hhhhhhhhc--------chHHHhcCHHHHHHHHHHHH-----HHHHHHhhcCCCchHh-----
Confidence 43322111 1111110 001111111 11112222322222111100 0011000 00111110
Q ss_pred hhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhcc
Q 026718 163 ELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 163 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
......+||++|++|++|++++....-.+....+.++++++|.++|.+++.-+++|+..+.+|+++.
T Consensus 210 ----~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 210 ----LVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ----hhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 0122338999999999999999999999999999999999999999999999999999999999864
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=1.4e-23 Score=155.86 Aligned_cols=193 Identities=9% Similarity=0.045 Sum_probs=122.7
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC--CCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP--LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
|+++||+|+++|+||+|.|..... ..+.....+.+.+++.... +.+++.++||||||++++.+|..+|++++++|++
T Consensus 218 La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~ 296 (414)
T PRK05077 218 LAPRGIAMLTIDMPSVGFSSKWKL-TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACL 296 (414)
T ss_pred HHhCCCEEEEECCCCCCCCCCCCc-cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEE
Confidence 567899999999999999975322 1344445556666666542 4578999999999999999999999999999999
Q ss_pred ccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhh
Q 026718 80 SALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEED 159 (234)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (234)
+++....... ....... +... ...+...+. .................
T Consensus 297 ~~~~~~~~~~-~~~~~~~----p~~~--------------------~~~la~~lg--~~~~~~~~l~~~l~~~s------ 343 (414)
T PRK05077 297 GPVVHTLLTD-PKRQQQV----PEMY--------------------LDVLASRLG--MHDASDEALRVELNRYS------ 343 (414)
T ss_pred CCccchhhcc-hhhhhhc----hHHH--------------------HHHHHHHhC--CCCCChHHHHHHhhhcc------
Confidence 8764311000 0000000 0000 000000000 00001111111111100
Q ss_pred hhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhcc
Q 026718 160 MSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 160 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
+.....+ ....++|+|+|+|++|.++|++..+.+.+..++.+++++|++ ++.+.++++.+.|.+||.++
T Consensus 344 l~~~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 344 LKVQGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred chhhhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 0000001 122378999999999999999999999999999999999976 56689999999999999753
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=99.92 E-value=2.2e-24 Score=168.93 Aligned_cols=226 Identities=19% Similarity=0.159 Sum_probs=123.4
Q ss_pred CCCceEEeecCCCCCCCCCCC-CCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC--CcccceeEEec
Q 026718 4 SSGHNVTAFDLAASGVEPQQV-HNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF--PNKISVAVFVS 80 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~ 80 (234)
.++|+|+++|+||||.|+.+. ...++++++++|+.++++++...++++|+||||||.+++.++... ++++..++.++
T Consensus 49 ~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 49 ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 568999999999999998643 235799999999999999993334599999999999998887762 44555555444
Q ss_pred cCCCCCCcchhhhhhhh----hhhcCCccccccc-----ccCCCCCCCC-cccccchhHHHHHhhcC--CcccHHHHHHh
Q 026718 81 ALKPGPDLNISTLNQES----FSRQGPLLDCKYA-----YDDGPDSPPT-TFIFGPLYLKSTVYQLS--PVEDWALATML 148 (234)
Q Consensus 81 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 148 (234)
++.... ......... ............. .......... ............+.... ...........
T Consensus 129 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (582)
T PRK05855 129 GPSLDH--VGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL 206 (582)
T ss_pred CCchHH--HHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh
Confidence 321100 000000000 0000000000000 0000000000 00000000000000000 00000000000
Q ss_pred ---cCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHH
Q 026718 149 ---MRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAH 225 (234)
Q Consensus 149 ---~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~ 225 (234)
......+... .............++|+++|+|++|.++++...+.+.+.+++.++++++ +||++++|+|+++++.
T Consensus 207 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~ 284 (582)
T PRK05855 207 SDGAHGVKLYRAN-MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAA 284 (582)
T ss_pred ccccchHHHHHhh-hhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHH
Confidence 0000000000 0000000112234899999999999999999988888888888888887 8999999999999999
Q ss_pred HHHHhhcc
Q 026718 226 LLSIAGNY 233 (234)
Q Consensus 226 i~~fl~~~ 233 (234)
|.+|+.+.
T Consensus 285 i~~fl~~~ 292 (582)
T PRK05855 285 VAEFVDAV 292 (582)
T ss_pred HHHHHHhc
Confidence 99999753
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.92 E-value=1.2e-23 Score=149.08 Aligned_cols=209 Identities=11% Similarity=-0.045 Sum_probs=117.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC----CCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP----LDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
|+++||+|+++|+||||.|+... .+++++.+|+.++++.+. +.++++++||||||.+++.++.. +++|+++|
T Consensus 53 l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~li 128 (274)
T TIGR03100 53 LAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLV 128 (274)
T ss_pred HHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEE
Confidence 45689999999999999987532 467788888888888761 34679999999999999999765 56899999
Q ss_pred EeccCCCCCCcchhhhhhhhhhhcCCccc-ccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccch
Q 026718 78 FVSALKPGPDLNISTLNQESFSRQGPLLD-CKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFS 156 (234)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (234)
+++|................... .... ..+.... .. ..........+... .... ..........
T Consensus 129 l~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~g---~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~ 193 (274)
T TIGR03100 129 LLNPWVRTEAAQAASRIRHYYLG--QLLSADFWRKLL----SG---EVNLGSSLRGLGDA-----LLKA-RQKGDEVAHG 193 (274)
T ss_pred EECCccCCcccchHHHHHHHHHH--HHhChHHHHHhc----CC---CccHHHHHHHHHHH-----HHhh-hhcCCCcccc
Confidence 99986432221111111111000 0000 0000000 00 00000000000000 0000 0000000000
Q ss_pred hhhhhhhhcccccccCCccEEEEeeCCCccccHHHH-----HHHHHhC--CCCcEEEccCCCcceeecCh-HHHHHHHHH
Q 026718 157 EEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLA-----MWMIKRN--PPHQVEEIKDSDHMVMMSKP-LELWAHLLS 228 (234)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-----~~~~~~~--~~~~~~~~~~~gH~~~~~~p-~~~~~~i~~ 228 (234)
. +... ........++|+++++|++|...+.-.. ....+.+ ++++++.+++++|++..+.+ +++.+.|.+
T Consensus 194 -~-~~~~-~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~ 270 (274)
T TIGR03100 194 -G-LAER-MKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTE 270 (274)
T ss_pred -h-HHHH-HHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHH
Confidence 0 0000 0001111278999999999988642211 4445544 78899999999999966554 999999999
Q ss_pred Hhhc
Q 026718 229 IAGN 232 (234)
Q Consensus 229 fl~~ 232 (234)
||++
T Consensus 271 wL~~ 274 (274)
T TIGR03100 271 WLRR 274 (274)
T ss_pred HHhC
Confidence 9964
No 51
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.91 E-value=1.8e-23 Score=135.76 Aligned_cols=199 Identities=12% Similarity=0.105 Sum_probs=132.1
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
|.++||+|++|.+||||.....--. ++.++|.+++.+..+++ .+.+.|.++|.||||.+++.+|..+| ++++|.+
T Consensus 38 L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m 114 (243)
T COG1647 38 LNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPM 114 (243)
T ss_pred HHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeee
Confidence 5678999999999999987643332 58888888887777766 36789999999999999999999998 8999999
Q ss_pred ccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcC--CcccHHHHHHhcCccccchh
Q 026718 80 SALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLS--PVEDWALATMLMRPLGLFSE 157 (234)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 157 (234)
+++...... ....+.+.. +.+. ... ....+.+.+.+.+.... +.........+...
T Consensus 115 ~a~~~~k~~--~~iie~~l~----y~~~-~kk---------~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~------ 172 (243)
T COG1647 115 CAPVNVKSW--RIIIEGLLE----YFRN-AKK---------YEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKD------ 172 (243)
T ss_pred cCCcccccc--hhhhHHHHH----HHHH-hhh---------ccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHH------
Confidence 986543321 111122111 0000 000 11112223333322222 11222111111111
Q ss_pred hhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeec-ChHHHHHHHHHHhhc
Q 026718 158 EDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMS-KPLELWAHLLSIAGN 232 (234)
Q Consensus 158 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl~~ 232 (234)
.......+..|++++.|.+|.++|.+.+..+.+... ..++.+++++||.+..+ +.+.+.+.|..||++
T Consensus 173 -------~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 173 -------ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred -------HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 001122236799999999999999999999988764 56999999999999886 558899999999974
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.89 E-value=2.8e-23 Score=150.69 Aligned_cols=217 Identities=16% Similarity=0.069 Sum_probs=115.1
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCcc--ccee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNK--ISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~l 76 (234)
|.++||+|+++|+||||.++......+.. ...+|+..+++.+ .+..+++++||||||.+++.++..+++. +.++
T Consensus 83 l~~~G~~v~~~d~rG~g~~~~~~~~~~~~-~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~ 161 (324)
T PRK10985 83 AQKRGWLGVVMHFRGCSGEPNRLHRIYHS-GETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAA 161 (324)
T ss_pred HHHCCCEEEEEeCCCCCCCccCCcceECC-CchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEE
Confidence 46789999999999999876432212221 1234444443332 1567899999999999988888877644 8899
Q ss_pred EEeccCCCCCCcch--hhhhhhhhhh-cCCccc----ccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHh-
Q 026718 77 VFVSALKPGPDLNI--STLNQESFSR-QGPLLD----CKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATML- 148 (234)
Q Consensus 77 vl~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 148 (234)
|+++++........ .........+ +...+. .....+.. ......+.+ .. ..........
T Consensus 162 v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~------~~~~~~~~~----~~---~~~~~~fd~~~ 228 (324)
T PRK10985 162 VIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPG------TLPINLAQL----KS---VRRLREFDDLI 228 (324)
T ss_pred EEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc------cccCCHHHH----hc---CCcHHHHhhhh
Confidence 99987643221110 0000000000 000000 00000000 000000000 00 0000000000
Q ss_pred cCccccchhh-h-hhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecCh-----HH
Q 026718 149 MRPLGLFSEE-D-MSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKP-----LE 221 (234)
Q Consensus 149 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-----~~ 221 (234)
......+... . +...........+++|+++|+|++|++++++....+.+..++.++++++++||+.++|.. ..
T Consensus 229 ~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w 308 (324)
T PRK10985 229 TARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMW 308 (324)
T ss_pred eeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCcc
Confidence 0000000000 0 111111122233478999999999999999888777778889999999999999999842 34
Q ss_pred HHHHHHHHhhc
Q 026718 222 LWAHLLSIAGN 232 (234)
Q Consensus 222 ~~~~i~~fl~~ 232 (234)
..+.+.+|+..
T Consensus 309 ~~~~~~~~~~~ 319 (324)
T PRK10985 309 LEQRIPDWLTT 319 (324)
T ss_pred HHHHHHHHHHH
Confidence 55667777654
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.89 E-value=5.3e-22 Score=145.62 Aligned_cols=225 Identities=12% Similarity=0.048 Sum_probs=121.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhH-HHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKP-LIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
|+++||+|+++|++|+|.|+.. .++++++.+ +.++++.+ .+.++++++||||||.+++.++..+|++|+++|
T Consensus 90 L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv 165 (350)
T TIGR01836 90 LLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLV 165 (350)
T ss_pred HHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEE
Confidence 4678999999999999987532 466776543 44444433 267899999999999999999999999999999
Q ss_pred EeccCCCCCCcc--hhhhhhh-----hhhh---cCCc-ccccccccCCCCCCCC-------cccccchhHHHHH-----h
Q 026718 78 FVSALKPGPDLN--ISTLNQE-----SFSR---QGPL-LDCKYAYDDGPDSPPT-------TFIFGPLYLKSTV-----Y 134 (234)
Q Consensus 78 l~~~~~~~~~~~--~~~~~~~-----~~~~---~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~ 134 (234)
+++++....... ....... .... ++.+ +...+.. ..+..... ....+++...... .
T Consensus 166 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~-l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 244 (350)
T TIGR01836 166 TMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLM-LKPFSLGYQKYVNLVDILEDERKVENFLRMEKWI 244 (350)
T ss_pred EeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHh-cCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHh
Confidence 999876432211 0000000 0000 0000 0000000 00000000 0000011110000 0
Q ss_pred hcCCcccHHHH----HHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCC--CcEEEcc
Q 026718 135 QLSPVEDWALA----TMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPP--HQVEEIK 208 (234)
Q Consensus 135 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~ 208 (234)
........... ............. +............++|+++++|++|.++|++..+.+.+.++. .++++++
T Consensus 245 ~d~~~~~~~~~~~~~~~~~~~n~l~~g~-~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~ 323 (350)
T TIGR01836 245 FDSPDQAGEAFRQFVKDFYQQNGLINGE-VEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP 323 (350)
T ss_pred cCCcCccHHHHHHHHHHHHhcCcccCCe-eEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC
Confidence 00000000000 0100000000000 000000011222378999999999999999999999888864 4667777
Q ss_pred CCCcceeecCh---HHHHHHHHHHhhcc
Q 026718 209 DSDHMVMMSKP---LELWAHLLSIAGNY 233 (234)
Q Consensus 209 ~~gH~~~~~~p---~~~~~~i~~fl~~~ 233 (234)
+||..++.++ +++.+.|.+|+.++
T Consensus 324 -~gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 324 -GGHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred -CCCEEEEECchhHhhhhHHHHHHHHhC
Confidence 8999887654 78899999999763
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.88 E-value=2.2e-21 Score=135.73 Aligned_cols=184 Identities=10% Similarity=0.048 Sum_probs=107.1
Q ss_pred CCCCCceEEeecCCCC-CCCCCCCCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeEE
Q 026718 2 IKSSGHNVTAFDLAAS-GVEPQQVHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVF 78 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 78 (234)
|+++||.|+.+|+||+ |.|++.... .+......|+..+++.+ ...+++.|+||||||.+|+..|... .++.+|+
T Consensus 60 La~~G~~vLrfD~rg~~GeS~G~~~~-~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~ 136 (307)
T PRK13604 60 LSSNGFHVIRYDSLHHVGLSSGTIDE-FTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLIT 136 (307)
T ss_pred HHHCCCEEEEecCCCCCCCCCCcccc-CcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEE
Confidence 5689999999999998 999765432 34455567776666655 2567899999999999997777643 4889999
Q ss_pred eccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhH-HHHHhhcCCcccHHHHHHhcCccccchh
Q 026718 79 VSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYL-KSTVYQLSPVEDWALATMLMRPLGLFSE 157 (234)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (234)
.+|..... ........ .... .+.. ...+....+....+ ...+ .....+.....
T Consensus 137 ~sp~~~l~-----d~l~~~~~---~~~~-~~p~----~~lp~~~d~~g~~l~~~~f-----------~~~~~~~~~~~-- 190 (307)
T PRK13604 137 AVGVVNLR-----DTLERALG---YDYL-SLPI----DELPEDLDFEGHNLGSEVF-----------VTDCFKHGWDT-- 190 (307)
T ss_pred cCCcccHH-----HHHHHhhh---cccc-cCcc----cccccccccccccccHHHH-----------HHHHHhcCccc--
Confidence 98875422 11111100 0000 0000 00000000000000 0001 01100000000
Q ss_pred hhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeecCh
Q 026718 158 EDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMSKP 219 (234)
Q Consensus 158 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p 219 (234)
+ ..........++|+|+|||++|.++|++.++.+.+.++ +++++.+||++|.+. |++
T Consensus 191 --~--~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~ 249 (307)
T PRK13604 191 --L--DSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENL 249 (307)
T ss_pred --c--ccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cch
Confidence 0 00001111126899999999999999999999998775 689999999999875 444
No 55
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.88 E-value=7.1e-22 Score=148.99 Aligned_cols=215 Identities=14% Similarity=-0.006 Sum_probs=117.3
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC-CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHH----HHHHhC-Ccccce
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH-NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVA----QSMERF-PNKISV 75 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~----~~a~~~-p~~v~~ 75 (234)
|.++||+|+++|++|+|.|..... ..|..+.+.+.+..+++.. +.++++++||||||.++. .+++.. |++|++
T Consensus 216 L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~-g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~s 294 (532)
T TIGR01838 216 LVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAIT-GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKS 294 (532)
T ss_pred HHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhc-CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccce
Confidence 567899999999999998865322 2234444555666666666 889999999999999852 245555 789999
Q ss_pred eEEeccCCCCCCcchhhh---------hhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhc----------
Q 026718 76 AVFVSALKPGPDLNISTL---------NQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQL---------- 136 (234)
Q Consensus 76 lvl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 136 (234)
++++++............ .+.........-...+........+ ....-...+...+...
T Consensus 295 lvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp--~~l~w~~~v~~yl~g~~~~~fdll~W 372 (532)
T TIGR01838 295 ATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRE--NDLIWNYYVDNYLKGKSPVPFDLLFW 372 (532)
T ss_pred EEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcCh--hhHHHHHHHHHHhcCCCccchhHHHH
Confidence 999998765432111100 0011100000000000000000000 0000000001011100
Q ss_pred ---CCccc----HHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccC
Q 026718 137 ---SPVED----WALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKD 209 (234)
Q Consensus 137 ---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (234)
...-. ......++......... +...........+++|+++|+|++|.++|++....+.+.+++.+..++++
T Consensus 373 n~D~t~lP~~~~~~~lr~ly~~N~L~~G~-~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~ 451 (532)
T TIGR01838 373 NSDSTNLPGKMHNFYLRNLYLQNALTTGG-LEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGE 451 (532)
T ss_pred hccCccchHHHHHHHHHHHHhcCCCcCCe-eEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECC
Confidence 00000 11111111111111000 11111112223347899999999999999999999999999989999999
Q ss_pred CCcceeecChH
Q 026718 210 SDHMVMMSKPL 220 (234)
Q Consensus 210 ~gH~~~~~~p~ 220 (234)
+||.+++++|.
T Consensus 452 sGHi~~ienPp 462 (532)
T TIGR01838 452 SGHIAGVVNPP 462 (532)
T ss_pred CCCchHhhCCC
Confidence 99999999874
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.86 E-value=2.9e-20 Score=124.23 Aligned_cols=159 Identities=13% Similarity=0.045 Sum_probs=105.8
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
.+|+|+++|+|||| ++.++++.++++++ +.++++++||||||.+++.+|.++|. ++|+++|+..
T Consensus 31 ~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~-~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 31 PDIEMIVPQLPPYP------------ADAAELLESLVLEH-GGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred CCCeEEeCCCCCCH------------HHHHHHHHHHHHHc-CCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 37999999999985 35788899999998 78899999999999999999999983 4688887533
Q ss_pred CCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhh
Q 026718 85 GPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKEL 164 (234)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (234)
. ......... ..... ... ....+...++.+. .. .. .
T Consensus 95 ~-----~~~~~~~~~-------~~~~~----~~~-~~~~~~~~~~~d~-------------~~-~~---------~---- 130 (190)
T PRK11071 95 P-----FELLTDYLG-------ENENP----YTG-QQYVLESRHIYDL-------------KV-MQ---------I---- 130 (190)
T ss_pred H-----HHHHHHhcC-------Ccccc----cCC-CcEEEcHHHHHHH-------------Hh-cC---------C----
Confidence 1 111111110 00000 000 0011111111110 00 00 0
Q ss_pred cccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 165 KLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 165 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
.... ..+|+++++|++|.++|++.+.++.+. ++++.++|++|.+ +..+++.+.|.+|++
T Consensus 131 --~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 131 --DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred --ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 0011 167899999999999999999988884 4677889999988 555889999999975
No 57
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.85 E-value=5.8e-21 Score=130.93 Aligned_cols=184 Identities=15% Similarity=0.126 Sum_probs=110.0
Q ss_pred CCCCCceEEeecCCCCCCCCCCC---CCCCchhhhhhHHHHHHHhc-----CCCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQV---HNLRSISDFFKPLIDFMAAL-----PLDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
|+++||.|+.+|.||.+...... .....-...++|+.+.++.+ -+.+++.++|||+||++++.++.++|+++
T Consensus 10 la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f 89 (213)
T PF00326_consen 10 LASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRF 89 (213)
T ss_dssp HHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGS
T ss_pred HHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceee
Confidence 46899999999999987543211 11112233455555555554 14578999999999999999999999999
Q ss_pred ceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhh-cCCcccHHHHHHhcCcc
Q 026718 74 SVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQ-LSPVEDWALATMLMRPL 152 (234)
Q Consensus 74 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 152 (234)
++++..++........... . . +....... ..+........
T Consensus 90 ~a~v~~~g~~d~~~~~~~~----------------------------~-~----~~~~~~~~~~~~~~~~~~~~------ 130 (213)
T PF00326_consen 90 KAAVAGAGVSDLFSYYGTT----------------------------D-I----YTKAEYLEYGDPWDNPEFYR------ 130 (213)
T ss_dssp SEEEEESE-SSTTCSBHHT----------------------------C-C----HHHGHHHHHSSTTTSHHHHH------
T ss_pred eeeeccceecchhcccccc----------------------------c-c----cccccccccCccchhhhhhh------
Confidence 9999998865432111000 0 0 00000000 11101111110
Q ss_pred ccchhhhhhhhhccccccc--CCccEEEEeeCCCccccHHHHHHHHHhC----CCCcEEEccCCCccee-ecChHHHHHH
Q 026718 153 GLFSEEDMSKELKLTWERY--GTVRRVYIISEKDLVTEKDLAMWMIKRN----PPHQVEEIKDSDHMVM-MSKPLELWAH 225 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~--~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~-~~~p~~~~~~ 225 (234)
.......... .++|+|+++|++|..+|++.+..+.+.+ ..++++++|++||.+. .+......+.
T Consensus 131 ---------~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~ 201 (213)
T PF00326_consen 131 ---------ELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYER 201 (213)
T ss_dssp ---------HHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHH
T ss_pred ---------hhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHH
Confidence 0001111111 2789999999999999988777666554 3578999999999554 3444677888
Q ss_pred HHHHhhcc
Q 026718 226 LLSIAGNY 233 (234)
Q Consensus 226 i~~fl~~~ 233 (234)
+.+|++++
T Consensus 202 ~~~f~~~~ 209 (213)
T PF00326_consen 202 ILDFFDKY 209 (213)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888764
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.85 E-value=2.3e-19 Score=127.29 Aligned_cols=217 Identities=19% Similarity=0.090 Sum_probs=121.9
Q ss_pred ceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCC
Q 026718 7 HNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGP 86 (234)
Q Consensus 7 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 86 (234)
|+|+++|+||||.|. .. .++...+++++..+++.+ +..+++++||||||.+++.++.++|+++++++++++.....
T Consensus 51 ~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~ 126 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDAL-GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPG 126 (282)
T ss_pred eEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHh-CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcc
Confidence 899999999999997 11 245566699999999999 77779999999999999999999999999999999765311
Q ss_pred C-cchh------hhhhhhhhhcCCc-ccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHH---HHhcCccccc
Q 026718 87 D-LNIS------TLNQESFSRQGPL-LDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALA---TMLMRPLGLF 155 (234)
Q Consensus 87 ~-~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 155 (234)
. .... ............. .......... ... ......... ............... ..........
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (282)
T COG0596 127 LLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAA-LGL--LAALAAAAR-AGLAEALRAPLLGAAAAAFARAARADLA 202 (282)
T ss_pred cccCccccCccccchhhhhhhhhccchhhhhhhhhc-ccc--cccccccch-hccccccccccchhHhhhhhhhcccccc
Confidence 0 0000 0000000000000 0000000000 000 000000000 000000000000000 0000000000
Q ss_pred hhh-hhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCC-CcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 156 SEE-DMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPP-HQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 156 ~~~-~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
... ..............++|+++++|++|.+.+......+.+..++ .++++++++||++++++|+.+++.+.+|+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 203 AALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred hhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 000 0000001111222368999999999977776666777778885 899999999999999999999999988554
No 59
>PLN02872 triacylglycerol lipase
Probab=99.84 E-value=2e-20 Score=137.47 Aligned_cols=231 Identities=11% Similarity=0.072 Sum_probs=125.8
Q ss_pred CCCCCceEEeecCCCCCCCCC----C-CC---CCCchhhhh-hHHHHHHHhcC--CCCceEEEeeChhHHHHHHHHHhCC
Q 026718 2 IKSSGHNVTAFDLAASGVEPQ----Q-VH---NLRSISDFF-KPLIDFMAALP--LDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~----~-~~---~~~~~~~~~-~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
|+++||+|+++|+||+|.|.+ . .. ..+++.+++ .|+.++++++. ..++++++||||||.+++.++ .+|
T Consensus 103 La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p 181 (395)
T PLN02872 103 LADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQP 181 (395)
T ss_pred HHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hCh
Confidence 567899999999999886632 1 11 136888888 79999999861 347999999999999998555 567
Q ss_pred c---ccceeEEeccCCCCCCcchhhh---hh----hhhhhcC--Cc------ccccccccCCCC---------CCCCccc
Q 026718 71 N---KISVAVFVSALKPGPDLNISTL---NQ----ESFSRQG--PL------LDCKYAYDDGPD---------SPPTTFI 123 (234)
Q Consensus 71 ~---~v~~lvl~~~~~~~~~~~~~~~---~~----~~~~~~~--~~------~~~~~~~~~~~~---------~~~~~~~ 123 (234)
+ +|+.+++++|............ .. .+...+. .+ ........-... .......
T Consensus 182 ~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~ 261 (395)
T PLN02872 182 NVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCC 261 (395)
T ss_pred HHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcc
Confidence 6 6888899988754321111100 00 0000000 00 000000000000 0000000
Q ss_pred ccchhHHHHHhhc---CCcccHHHHHHhcCccccchhh-----hhhhhhccccc----ccC--CccEEEEeeCCCccccH
Q 026718 124 FGPLYLKSTVYQL---SPVEDWALATMLMRPLGLFSEE-----DMSKELKLTWE----RYG--TVRRVYIISEKDLVTEK 189 (234)
Q Consensus 124 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----~~~--~~P~l~i~g~~D~~~~~ 189 (234)
+....+....... .+...........+......-+ .+........+ ..+ ++|+++++|++|.++++
T Consensus 262 ~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~ 341 (395)
T PLN02872 262 FNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADV 341 (395)
T ss_pred cchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCH
Confidence 0111111111110 0001111111111111111000 00000000111 111 47999999999999999
Q ss_pred HHHHHHHHhCCC-CcEEEccCCCcce---eecChHHHHHHHHHHhhcc
Q 026718 190 DLAMWMIKRNPP-HQVEEIKDSDHMV---MMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 190 ~~~~~~~~~~~~-~~~~~~~~~gH~~---~~~~p~~~~~~i~~fl~~~ 233 (234)
+..+.+.+.+++ .+++.++++||.. ..+.|+++.+.|.+|++++
T Consensus 342 ~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 342 TDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred HHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 999999999887 5888999999964 4488999999999999864
No 60
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.82 E-value=1.6e-19 Score=120.92 Aligned_cols=161 Identities=17% Similarity=0.204 Sum_probs=113.9
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
+++|+++|++|+|.|.+.+.+ ....+.++.+-++++.-. ..++++|+|+|+|+...+.+|.+.| ++++||.+|...
T Consensus 88 n~nv~~~DYSGyG~S~G~psE-~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S 164 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPSE-RNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTS 164 (258)
T ss_pred cceEEEEecccccccCCCccc-ccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchh
Confidence 789999999999999987764 344444455555555543 4689999999999999999999998 999999998653
Q ss_pred CCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhh
Q 026718 85 GPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKEL 164 (234)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (234)
...... ... .. ..+ ++...
T Consensus 165 ~~rv~~-----~~~-------~~-------------~~~------------------------------------~d~f~ 183 (258)
T KOG1552|consen 165 GMRVAF-----PDT-------KT-------------TYC------------------------------------FDAFP 183 (258)
T ss_pred hhhhhc-----cCc-------ce-------------EEe------------------------------------ecccc
Confidence 221000 000 00 000 00000
Q ss_pred cccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCC-cEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 165 KLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPH-QVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 165 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
.......+++|+++++|++|.+++......+.+..++. +-.++.|+||.-..-. .++.+.+..|+.
T Consensus 184 ~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~-~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 184 NIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELY-PEYIEHLRRFIS 250 (258)
T ss_pred ccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccC-HHHHHHHHHHHH
Confidence 11223334889999999999999999999999999865 8888999999876444 456677777765
No 61
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.82 E-value=1.2e-20 Score=126.91 Aligned_cols=76 Identities=24% Similarity=0.364 Sum_probs=64.8
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHh--CCcccceeEEecc
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMER--FPNKISVAVFVSA 81 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~ 81 (234)
..+|+++|+||||.|...+....+.+.++.|+.++++++ ....+++||||||||.+|...|.. .|. +.+++.++-
T Consensus 102 ~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDV 180 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDV 180 (343)
T ss_pred ceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEE
Confidence 467899999999999887776789999999999999998 345789999999999999887764 365 899998885
Q ss_pred C
Q 026718 82 L 82 (234)
Q Consensus 82 ~ 82 (234)
.
T Consensus 181 V 181 (343)
T KOG2564|consen 181 V 181 (343)
T ss_pred e
Confidence 3
No 62
>PRK10566 esterase; Provisional
Probab=99.82 E-value=3.5e-19 Score=125.24 Aligned_cols=181 Identities=15% Similarity=0.105 Sum_probs=101.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCch-------hhhhhHHHHHHHhc-----CCCCceEEEeeChhHHHHHHHHHhC
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSI-------SDFFKPLIDFMAAL-----PLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~-------~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
|+++||+|+++|+||||.+...... ..+ .+..+|+.++++.+ .+.++++++|||+||.+++.++.++
T Consensus 50 l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~ 128 (249)
T PRK10566 50 LAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARH 128 (249)
T ss_pred HHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhC
Confidence 4678999999999999976432110 111 12234444444432 1457899999999999999999988
Q ss_pred CcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhc
Q 026718 70 PNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLM 149 (234)
Q Consensus 70 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (234)
|+....++++++... ....... +.. ... ......... ....
T Consensus 129 ~~~~~~~~~~~~~~~----------~~~~~~~-------~~~----~~~--~~~~~~~~~----------------~~~~ 169 (249)
T PRK10566 129 PWVKCVASLMGSGYF----------TSLARTL-------FPP----LIP--ETAAQQAEF----------------NNIV 169 (249)
T ss_pred CCeeEEEEeeCcHHH----------HHHHHHh-------ccc----ccc--cccccHHHH----------------HHHH
Confidence 864444444443211 0010000 000 000 000000000 0000
Q ss_pred CccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCC------CcEEEccCCCcceeecChHHHH
Q 026718 150 RPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPP------HQVEEIKDSDHMVMMSKPLELW 223 (234)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~~p~~~~ 223 (234)
..... +.....+ ....++|+++++|++|.+++++..+.+.+.++. .++++++++||.+. + ...
T Consensus 170 ~~~~~-----~~~~~~~--~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~ 238 (249)
T PRK10566 170 APLAE-----WEVTHQL--EQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-EAL 238 (249)
T ss_pred HHHhh-----cChhhhh--hhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-HHH
Confidence 00000 0000000 111157999999999999999988888876642 46778899999863 3 356
Q ss_pred HHHHHHhhcc
Q 026718 224 AHLLSIAGNY 233 (234)
Q Consensus 224 ~~i~~fl~~~ 233 (234)
+.+.+||+++
T Consensus 239 ~~~~~fl~~~ 248 (249)
T PRK10566 239 DAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHhh
Confidence 8888888765
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.80 E-value=2.5e-18 Score=141.24 Aligned_cols=228 Identities=14% Similarity=0.102 Sum_probs=121.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC-CCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhC-CcccceeE
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH-NLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERF-PNKISVAV 77 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lv 77 (234)
|.++||+|+++|+ |.|+.+.. ...++.+++..+.+.++.+ ...++++++||||||.+++.+++.+ +++|+++|
T Consensus 95 L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lv 171 (994)
T PRK07868 95 LHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIV 171 (994)
T ss_pred HHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEE
Confidence 4578999999995 66665433 1357777777666666542 0346899999999999999998755 56899999
Q ss_pred EeccCCCCCCcchhhhhhhhhhhcCCccc-ccccccCCCCC--CCCcccccc----hhHHHHHhhcCCcc----------
Q 026718 78 FVSALKPGPDLNISTLNQESFSRQGPLLD-CKYAYDDGPDS--PPTTFIFGP----LYLKSTVYQLSPVE---------- 140 (234)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~---------- 140 (234)
+++++.....................+.. ........+.. ........+ ......+.......
T Consensus 172 l~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~ 251 (994)
T PRK07868 172 TFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRR 251 (994)
T ss_pred EEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHh
Confidence 98876533211000000000000000000 00000000000 000000000 00000000000000
Q ss_pred --------------cHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcE-E
Q 026718 141 --------------DWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQV-E 205 (234)
Q Consensus 141 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~ 205 (234)
.......+.......... +...........+++|+|+|+|++|.++|++..+.+.+.+++.++ .
T Consensus 252 ~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~-~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~ 330 (994)
T PRK07868 252 FLESEGWIAWSGPAISELLKQFIAHNRMMTGG-FAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYE 330 (994)
T ss_pred HHHHhhccccchHHHHHHHHHHHHhCcccCce-EEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEE
Confidence 000011110000000000 000000001233478999999999999999999999999999987 6
Q ss_pred EccCCCcceeec---ChHHHHHHHHHHhhcc
Q 026718 206 EIKDSDHMVMMS---KPLELWAHLLSIAGNY 233 (234)
Q Consensus 206 ~~~~~gH~~~~~---~p~~~~~~i~~fl~~~ 233 (234)
+++++||+.++- -++++...|.+||.++
T Consensus 331 ~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 331 SLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred EeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 778899998874 5688889999999865
No 64
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=3e-18 Score=114.11 Aligned_cols=190 Identities=17% Similarity=0.092 Sum_probs=121.8
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHH-hcCCCCceEEEeeChhHHHHHHHHHhCCc---ccceeEEecc
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMA-ALPLDKKVILVGHSYGGLAVAQSMERFPN---KISVAVFVSA 81 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~ 81 (234)
.+.++++.+||+|.--..+. ..+++++++.+..-+. -. ..+++.++||||||++|.++|.+... ....+.+.+.
T Consensus 33 ~iel~avqlPGR~~r~~ep~-~~di~~Lad~la~el~~~~-~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~ 110 (244)
T COG3208 33 DIELLAVQLPGRGDRFGEPL-LTDIESLADELANELLPPL-LDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGC 110 (244)
T ss_pred hhheeeecCCCcccccCCcc-cccHHHHHHHHHHHhcccc-CCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 47899999999997755444 3799999999998888 45 67899999999999999999986521 2556666655
Q ss_pred CCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcC-C------cccHHHHHHhcCcccc
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLS-P------VEDWALATMLMRPLGL 154 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~ 154 (234)
..|..... ... ...-+.+++.....-.. + .+......-.++.+..
T Consensus 111 ~aP~~~~~--~~i--------------------------~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~ 162 (244)
T COG3208 111 RAPHYDRG--KQI--------------------------HHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFR 162 (244)
T ss_pred CCCCCccc--CCc--------------------------cCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHH
Confidence 44421110 000 01111111111111100 0 1111111112221111
Q ss_pred chhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC-CCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 155 FSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP-PHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
..+...........||+.++.|++|..++.+....+.+... ..++++++ +||+...++.+++.+.|.+.+.
T Consensus 163 -----~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 163 -----ALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred -----HhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 01111111122238999999999999999999888888776 67999999 9999999999999999988874
No 65
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.80 E-value=1.4e-18 Score=112.71 Aligned_cols=184 Identities=15% Similarity=0.119 Sum_probs=113.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCc--eEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKK--VILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
|.+.|+.++.+|++|.|.|+..-.+ -.....|+|+..+++++.+..+ -+++|||-||.+++.++.++++ +.-+|-+
T Consensus 58 ~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNc 135 (269)
T KOG4667|consen 58 LEKEGISAFRFDFSGNGESEGSFYY-GNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINC 135 (269)
T ss_pred HHhcCceEEEEEecCCCCcCCcccc-CcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEc
Confidence 5678999999999999999876542 2566677999999999844444 3689999999999999999987 6777766
Q ss_pred ccCCCCCCcchhhhhhhhhhhcCCcccc-cccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhh
Q 026718 80 SALKPGPDLNISTLNQESFSRQGPLLDC-KYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEE 158 (234)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (234)
++-......--....+... .++.+ .+..... ........+.++.+.+.+....
T Consensus 136 sGRydl~~~I~eRlg~~~l----~~ike~Gfid~~~-rkG~y~~rvt~eSlmdrLntd~--------------------- 189 (269)
T KOG4667|consen 136 SGRYDLKNGINERLGEDYL----ERIKEQGFIDVGP-RKGKYGYRVTEESLMDRLNTDI--------------------- 189 (269)
T ss_pred ccccchhcchhhhhcccHH----HHHHhCCceecCc-ccCCcCceecHHHHHHHHhchh---------------------
Confidence 6543322110000000000 01000 0000000 0000011111111111111000
Q ss_pred hhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecC
Q 026718 159 DMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSK 218 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 218 (234)
...... .+ .+||||-++|..|.++|.+.+.++++.+|+.++.++||+.|.....+
T Consensus 190 -h~aclk---Id-~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 190 -HEACLK---ID-KQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQ 244 (269)
T ss_pred -hhhhcC---cC-ccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchh
Confidence 000001 01 18999999999999999999999999999999999999999876544
No 66
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.76 E-value=1.8e-17 Score=106.94 Aligned_cols=123 Identities=22% Similarity=0.396 Sum_probs=90.5
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
|+++||.|+++|+||+|.+.... ..+++.+++. ....+.++++++|||+||.+++.++.+. .+++++|++++
T Consensus 22 l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 22 LAEQGYAVVAFDYPGHGDSDGAD----AVERVLADIR---AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHTTEEEEEESCTTSTTSHHSH----HHHHHHHHHH---HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESE
T ss_pred HHHCCCEEEEEecCCCCccchhH----HHHHHHHHHH---hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecC
Confidence 46789999999999999873211 2233333222 2122778999999999999999999988 78999999997
Q ss_pred CCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhh
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMS 161 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (234)
. +.. .. +.
T Consensus 94 ~-~~~--------~~---------------------------------------------------------------~~ 101 (145)
T PF12695_consen 94 Y-PDS--------ED---------------------------------------------------------------LA 101 (145)
T ss_dssp S-SGC--------HH---------------------------------------------------------------HT
T ss_pred c-cch--------hh---------------------------------------------------------------hh
Confidence 2 000 00 00
Q ss_pred hhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC-CCcEEEccCCCcc
Q 026718 162 KELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP-PHQVEEIKDSDHM 213 (234)
Q Consensus 162 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 213 (234)
..++|+++++|++|..++++..+.+.+.++ +.+++++++++|+
T Consensus 102 ---------~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 ---------KIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ---------TTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ---------ccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 005699999999999999999999888777 5799999999995
No 67
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.75 E-value=3e-18 Score=111.31 Aligned_cols=174 Identities=15% Similarity=0.180 Sum_probs=114.7
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
.-+.+|+.+++||+|.|.+.+.+ ..+.-.++.+.+.+..- ....++++.|-|+||.+|+.+|++..+++.++|+-++
T Consensus 104 ~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT 182 (300)
T KOG4391|consen 104 NLKMNVLIVSYRGYGKSEGSPSE-EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT 182 (300)
T ss_pred HcCceEEEEEeeccccCCCCccc-cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech
Confidence 34678999999999999986653 34444444444444332 2567899999999999999999999999999999887
Q ss_pred CCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhh
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMS 161 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (234)
+...+...... ...+.-..+...... . .... +.
T Consensus 183 F~SIp~~~i~~----------------------------v~p~~~k~i~~lc~k----n-------~~~S--------~~ 215 (300)
T KOG4391|consen 183 FLSIPHMAIPL----------------------------VFPFPMKYIPLLCYK----N-------KWLS--------YR 215 (300)
T ss_pred hccchhhhhhe----------------------------eccchhhHHHHHHHH----h-------hhcc--------hh
Confidence 65432110000 000000011000000 0 0000 00
Q ss_pred hhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 162 KELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 162 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
. ....+.|.|+|.|.+|.++||.+.+.+.+..| ..++.++|++.|.-.+-. +...++|.+|+.+
T Consensus 216 k------i~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 216 K------IGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYFQAIEDFLAE 281 (300)
T ss_pred h------hccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-ccHHHHHHHHHHH
Confidence 0 00116799999999999999999999999988 468999999999765432 5577888888764
No 68
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.74 E-value=1.4e-17 Score=116.11 Aligned_cols=82 Identities=16% Similarity=0.140 Sum_probs=68.6
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
|+++||+|+++|+||||.|..... ..++..+++|+..+++.+ .+.++++++||||||.+++.++.++|++++++|++
T Consensus 52 La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~ 130 (266)
T TIGR03101 52 FAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLW 130 (266)
T ss_pred HHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEe
Confidence 456899999999999999976544 357888888877765544 15689999999999999999999999999999999
Q ss_pred ccCCC
Q 026718 80 SALKP 84 (234)
Q Consensus 80 ~~~~~ 84 (234)
+|...
T Consensus 131 ~P~~~ 135 (266)
T TIGR03101 131 QPVVS 135 (266)
T ss_pred ccccc
Confidence 98644
No 69
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.73 E-value=1.3e-16 Score=108.62 Aligned_cols=83 Identities=17% Similarity=0.237 Sum_probs=74.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
|.+.|.|+|.+++||+|.+++++...++-.+...-+.++++.+.-.++++.+|||.|+-.|+.++..+| +.++++++|
T Consensus 58 l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~ 135 (297)
T PF06342_consen 58 LDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINP 135 (297)
T ss_pred HHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecC
Confidence 567899999999999999999888789999999999999999955678999999999999999999986 679999999
Q ss_pred CCCCC
Q 026718 82 LKPGP 86 (234)
Q Consensus 82 ~~~~~ 86 (234)
+....
T Consensus 136 ~G~r~ 140 (297)
T PF06342_consen 136 PGLRP 140 (297)
T ss_pred Ccccc
Confidence 76544
No 70
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=2.3e-16 Score=111.30 Aligned_cols=229 Identities=11% Similarity=0.044 Sum_probs=133.7
Q ss_pred CCCCceEEeecCCCCC-CCCCCCC------------CCCchhhhhhHHHHHHHhcCCCCceE-EEeeChhHHHHHHHHHh
Q 026718 3 KSSGHNVTAFDLAASG-VEPQQVH------------NLRSISDFFKPLIDFMAALPLDKKVI-LVGHSYGGLAVAQSMER 68 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G-~S~~~~~------------~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~ 68 (234)
.-..|.||+.|-.|.+ .|..|.. +.++++|++..-..+++++ +++++. +||-||||+.+++++..
T Consensus 89 Dt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L-GI~~l~avvGgSmGGMqaleWa~~ 167 (368)
T COG2021 89 DTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDAL-GIKKLAAVVGGSMGGMQALEWAIR 167 (368)
T ss_pred CccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhc-CcceEeeeeccChHHHHHHHHHHh
Confidence 4456999999999876 4444321 3468899999888999999 888876 99999999999999999
Q ss_pred CCcccceeEEeccCCCCCCcchhh--hhhhhhhhcCCcccccccccCCCCCC-------CCcccccchhHHHHHhhcC--
Q 026718 69 FPNKISVAVFVSALKPGPDLNIST--LNQESFSRQGPLLDCKYAYDDGPDSP-------PTTFIFGPLYLKSTVYQLS-- 137 (234)
Q Consensus 69 ~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-- 137 (234)
||++|.+++.+++........... ........-+.|-...+.....+... .......+..+.+.+.+..
T Consensus 168 yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~ 247 (368)
T COG2021 168 YPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQA 247 (368)
T ss_pred ChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccc
Confidence 999999999998866544333221 11121111222211111000000000 0000111122222222200
Q ss_pred ---C----cccHHHHHH--------hcCccccc-hhhhhhhhhc-------ccccccCCccEEEEeeCCCccccHHHHHH
Q 026718 138 ---P----VEDWALATM--------LMRPLGLF-SEEDMSKELK-------LTWERYGTVRRVYIISEKDLVTEKDLAMW 194 (234)
Q Consensus 138 ---~----~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 194 (234)
. ....+.... ........ ...+++.... ......+++|++++.-+.|..+|++..+.
T Consensus 248 ~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~ 327 (368)
T COG2021 248 DPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRA 327 (368)
T ss_pred cccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHH
Confidence 0 000000000 00000000 0000000000 00112237899999999999999999999
Q ss_pred HHHhCCCCc-EEEcc-CCCcceeecChHHHHHHHHHHhhc
Q 026718 195 MIKRNPPHQ-VEEIK-DSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 195 ~~~~~~~~~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
+.+.++... +++++ ..||..++...+.+...|..||+.
T Consensus 328 ~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 328 LAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 999998776 65653 479999999999999999999874
No 71
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.72 E-value=8.2e-16 Score=104.64 Aligned_cols=216 Identities=11% Similarity=-0.062 Sum_probs=128.8
Q ss_pred CceEEeecCCCCCCCC--CCCC-CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 6 GHNVTAFDLAASGVEP--QQVH-NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~--~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.|.|+-+|-|||-... -+.+ ...++++++++|..+++++ +.+.++-+|--.|++|..++|..||++|.++||+++.
T Consensus 78 ~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 78 HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCD 156 (326)
T ss_pred heEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-CcceEEEecccccHHHHHHHHhcChhheeEEEEEecC
Confidence 4899999999995432 2333 2469999999999999999 9999999999999999999999999999999999986
Q ss_pred CCCCCcchhhhhhhhhhh-cC-----Cccccc-cc-ccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCcccc
Q 026718 83 KPGPDLNISTLNQESFSR-QG-----PLLDCK-YA-YDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGL 154 (234)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~-~~-----~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (234)
+...+...+. ..++... .. ...... +. .|+. .... ...-.-..++..+.+.............+.....
T Consensus 157 ~~a~gwiew~-~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~-e~~~-~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~D 233 (326)
T KOG2931|consen 157 PCAKGWIEWA-YNKVSSNLLYYYGMTQGVKDYLLAHHFGK-EELG-NNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRD 233 (326)
T ss_pred CCCchHHHHH-HHHHHHHHHHhhchhhhHHHHHHHHHhcc-cccc-ccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCC
Confidence 6544322111 1111110 00 000000 00 0000 0000 0000001122222222222222222222111111
Q ss_pred chhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 155 FSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
. ......... ..+||++++.|++.+.+. ....+..++. +..+..+.++|-.+..++|.++.+.+.-|++.
T Consensus 234 L-----~~~r~~~~~-tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 234 L-----SIERPKLGT-TLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred c-----cccCCCcCc-cccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 1 000000000 226999999999987653 3445555553 56788888999999999999999999999975
Q ss_pred c
Q 026718 233 Y 233 (234)
Q Consensus 233 ~ 233 (234)
+
T Consensus 306 ~ 306 (326)
T KOG2931|consen 306 M 306 (326)
T ss_pred C
Confidence 3
No 72
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.71 E-value=6.6e-16 Score=106.33 Aligned_cols=209 Identities=11% Similarity=0.034 Sum_probs=113.3
Q ss_pred CCceEEeecCCCCCCCCC--CCC-CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 5 SGHNVTAFDLAASGVEPQ--QVH-NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~--~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
++|.|+-+|.||+..-.. +.+ ...+++++++++.++++++ +.+.++-+|-..||.|...+|..+|++|.++||+++
T Consensus 54 ~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~ 132 (283)
T PF03096_consen 54 QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-GLKSVIGFGVGAGANILARFALKHPERVLGLILVNP 132 (283)
T ss_dssp TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH-T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-
T ss_pred hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC-CccEEEEEeeccchhhhhhccccCccceeEEEEEec
Confidence 568999999999965433 333 2359999999999999999 999999999999999999999999999999999998
Q ss_pred CCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHH-----HHhhcCCcccHHHHHHhc-Ccc---
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKS-----TVYQLSPVEDWALATMLM-RPL--- 152 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~--- 152 (234)
.....+.. ++...... ...+...+ .....++.+.. ..... ..+..+..+... +..
T Consensus 133 ~~~~~gw~--Ew~~~K~~------~~~L~~~g-------mt~~~~d~Ll~h~Fg~~~~~~-n~Dlv~~yr~~l~~~~Np~ 196 (283)
T PF03096_consen 133 TCTAAGWM--EWFYQKLS------SWLLYSYG-------MTSSVKDYLLWHYFGKEEEEN-NSDLVQTYRQHLDERINPK 196 (283)
T ss_dssp --S---HH--HHHHHHHH-------------C-------TTS-HHHHHHHHHS-HHHHHC-T-HHHHHHHHHHHT-TTHH
T ss_pred CCCCccHH--HHHHHHHh------cccccccc-------cccchHHhhhhcccccccccc-cHHHHHHHHHHHhcCCCHH
Confidence 76544322 11111110 00011000 01111111111 11111 111111111111 100
Q ss_pred --ccchhhhhhhhhcccc-cccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeecChHHHHHHHH
Q 026718 153 --GLFSEEDMSKELKLTW-ERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMSKPLELWAHLL 227 (234)
Q Consensus 153 --~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i~ 227 (234)
..+... +..+..+.. .....||+|++.|+..+... ....+..++. +.++..++++|=.+..|+|+.+++.++
T Consensus 197 Nl~~f~~s-y~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 197 NLALFLNS-YNSRTDLSIERPSLGCPVLLVVGDNSPHVD--DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp HHHHHHHH-HHT-----SECTTCCS-EEEEEETTSTTHH--HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred HHHHHHHH-HhccccchhhcCCCCCCeEEEEecCCcchh--hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHH
Confidence 111111 222222211 12226999999999987653 3456666663 458899999999999999999999999
Q ss_pred HHhhcc
Q 026718 228 SIAGNY 233 (234)
Q Consensus 228 ~fl~~~ 233 (234)
-|++.+
T Consensus 274 lFlQG~ 279 (283)
T PF03096_consen 274 LFLQGM 279 (283)
T ss_dssp HHHHHT
T ss_pred HHHccC
Confidence 999853
No 73
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.70 E-value=3.1e-17 Score=113.84 Aligned_cols=218 Identities=16% Similarity=0.093 Sum_probs=112.1
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCc--cccee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPN--KISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~l 76 (234)
+.++||.|+++++|||+.+.......|+.... +|+..+++.+ ....++..+|.|+||.+...+..+..+ .+.+.
T Consensus 100 ~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t-~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa 178 (345)
T COG0429 100 LSRRGWLVVVFHFRGCSGEANTSPRLYHSGET-EDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAA 178 (345)
T ss_pred HHhcCCeEEEEecccccCCcccCcceecccch-hHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCccccee
Confidence 45789999999999999987644433333222 5655555554 477899999999999555555444322 24444
Q ss_pred EEeccCCCCC------Ccchh-hhhhhh-hhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHh
Q 026718 77 VFVSALKPGP------DLNIS-TLNQES-FSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATML 148 (234)
Q Consensus 77 vl~~~~~~~~------~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (234)
+.++.+.... ..... ...... .+.+...+...+..+ ....+ ... ...... ..........
T Consensus 179 ~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l-~~~~p-------~~~-~~~ik~---~~ti~eFD~~ 246 (345)
T COG0429 179 VAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKEL-EPSLP-------GTV-LAAIKR---CRTIREFDDL 246 (345)
T ss_pred eeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhc-CcccC-------cHH-HHHHHh---hchHHhccce
Confidence 4444322110 00000 000000 000000000000000 00000 000 000000 0000000011
Q ss_pred cCccc----cchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHH-hCCCCcEEEccCCCcceeec----Ch
Q 026718 149 MRPLG----LFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIK-RNPPHQVEEIKDSDHMVMMS----KP 219 (234)
Q Consensus 149 ~~~~~----~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~----~p 219 (234)
+.... ..... +.....+.....+.+|+++|++.+|++++++..-.... ..|++.+..-+.+||.-++. +|
T Consensus 247 ~Tap~~Gf~da~dY-Yr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~ 325 (345)
T COG0429 247 LTAPLHGFADAEDY-YRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHP 325 (345)
T ss_pred eeecccCCCcHHHH-HHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccc
Confidence 11000 00111 33444444445557899999999999999987666665 77888999999999999987 34
Q ss_pred H-HHHHHHHHHhhcc
Q 026718 220 L-ELWAHLLSIAGNY 233 (234)
Q Consensus 220 ~-~~~~~i~~fl~~~ 233 (234)
. ...+.|.+|++.+
T Consensus 326 ~~W~~~ri~~~l~~~ 340 (345)
T COG0429 326 QMWLEQRILDWLDPF 340 (345)
T ss_pred hhhHHHHHHHHHHHH
Confidence 3 4556777777643
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.69 E-value=2.2e-15 Score=107.31 Aligned_cols=81 Identities=19% Similarity=0.217 Sum_probs=55.9
Q ss_pred CCCCceEEeecCCCCCC-----CCC---C---C-------C-----C--CCchhhhhhHHHHHHHhcCCCCceEEEeeCh
Q 026718 3 KSSGHNVTAFDLAASGV-----EPQ---Q---V-------H-----N--LRSISDFFKPLIDFMAALPLDKKVILVGHSY 57 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~-----S~~---~---~-------~-----~--~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~ 57 (234)
...|+.|+.+|..++|. +.. . . . . .+-.+++.+.+....+.+ +.++++++||||
T Consensus 74 ~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~~~~~i~G~S~ 152 (283)
T PLN02442 74 AARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQL-DTSRASIFGHSM 152 (283)
T ss_pred hhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhc-CCCceEEEEECh
Confidence 45699999999987761 100 0 0 0 0 011233333344444445 678899999999
Q ss_pred hHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 58 GGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 58 Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
||..++.++.++|+++++++.+++...
T Consensus 153 GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 153 GGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred hHHHHHHHHHhCchhEEEEEEECCccC
Confidence 999999999999999999999987643
No 75
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.68 E-value=3.8e-15 Score=105.89 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=58.4
Q ss_pred CCCceEEeecC--CCCCCCCCCC-------------------CCCCchhh-hhhHHHHHHHhc--CCCCceEEEeeChhH
Q 026718 4 SSGHNVTAFDL--AASGVEPQQV-------------------HNLRSISD-FFKPLIDFMAAL--PLDKKVILVGHSYGG 59 (234)
Q Consensus 4 ~~g~~vi~~D~--~G~G~S~~~~-------------------~~~~~~~~-~~~~l~~~l~~~--~~~~~~~lvGhS~Gg 59 (234)
+.||.|++||. +|+|.+.... ...++..+ .++++..++++. -+.++++++||||||
T Consensus 70 ~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG 149 (275)
T TIGR02821 70 EHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGG 149 (275)
T ss_pred hcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhH
Confidence 45899999998 5555332110 00123333 457777778762 155789999999999
Q ss_pred HHHHHHHHhCCcccceeEEeccCC
Q 026718 60 LAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 60 ~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
++++.++.++|+.+++++++++..
T Consensus 150 ~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 150 HGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHhCcccceEEEEECCcc
Confidence 999999999999999999998764
No 76
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.68 E-value=2.2e-15 Score=96.35 Aligned_cols=149 Identities=18% Similarity=0.154 Sum_probs=105.3
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCc-eEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKK-VILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
|.++||.++.+|+||.|+|.+.-.+...-.+-+..+.++++......+ ..+.|+|+|+++++.+|.+.|+ ....+.+.
T Consensus 56 l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~ 134 (210)
T COG2945 56 LVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISIL 134 (210)
T ss_pred HHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeecc
Confidence 568899999999999999998766444444445556666666623333 4789999999999999999875 33334333
Q ss_pred cCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhh
Q 026718 81 ALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDM 160 (234)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (234)
|..... . +
T Consensus 135 p~~~~~--d----------------------------------------------------------------------f 142 (210)
T COG2945 135 PPINAY--D----------------------------------------------------------------------F 142 (210)
T ss_pred CCCCch--h----------------------------------------------------------------------h
Confidence 321100 0 0
Q ss_pred hhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 161 SKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 161 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
..... ..+|.++|+|+.|.+++.....++++. ...+++++++++|+++ .+-+.+.+.|.+|+.
T Consensus 143 s~l~P------~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 143 SFLAP------CPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred hhccC------CCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 00000 056899999999999998877777776 4458899999999986 556778899999884
No 77
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.66 E-value=1.7e-15 Score=118.66 Aligned_cols=184 Identities=17% Similarity=0.135 Sum_probs=111.5
Q ss_pred CCCCCceEEeecCCCCCCCCCC-----C--CCCCchhhhhhHHHHHHHhcC--CCCceEEEeeChhHHHHHHHHHhCCcc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQ-----V--HNLRSISDFFKPLIDFMAALP--LDKKVILVGHSYGGLAVAQSMERFPNK 72 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~-----~--~~~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 72 (234)
|+.+||.|+.++.||.+.-... . .....++|+.+.+. ++...+ +.+++.++|||+||++++..+.+.| .
T Consensus 419 ~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~ 496 (620)
T COG1506 419 LASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-R 496 (620)
T ss_pred HhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-h
Confidence 5789999999999976542211 1 11235666666665 555553 3358999999999999999999888 6
Q ss_pred cceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCcc
Q 026718 73 ISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPL 152 (234)
Q Consensus 73 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
+++.+...+........ ..... ...... +........ ....
T Consensus 497 f~a~~~~~~~~~~~~~~-----~~~~~---------------------~~~~~~----~~~~~~~~~-~~~~-------- 537 (620)
T COG1506 497 FKAAVAVAGGVDWLLYF-----GESTE---------------------GLRFDP----EENGGGPPE-DREK-------- 537 (620)
T ss_pred hheEEeccCcchhhhhc-----cccch---------------------hhcCCH----HHhCCCccc-ChHH--------
Confidence 77776665543211000 00000 000000 000000000 0000
Q ss_pred ccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC----CCcEEEccCCCcceee-cChHHHHHHHH
Q 026718 153 GLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP----PHQVEEIKDSDHMVMM-SKPLELWAHLL 227 (234)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~ 227 (234)
+.....+.....+++|+|+|||++|..++.+.+..+.+.+. +++++++|+.||.+.- ++-..+.+.+.
T Consensus 538 -------~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~ 610 (620)
T COG1506 538 -------YEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEIL 610 (620)
T ss_pred -------HHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHH
Confidence 22222222233448899999999999999987777766553 5789999999998876 44556777788
Q ss_pred HHhhcc
Q 026718 228 SIAGNY 233 (234)
Q Consensus 228 ~fl~~~ 233 (234)
+|+.++
T Consensus 611 ~~~~~~ 616 (620)
T COG1506 611 DWFKRH 616 (620)
T ss_pred HHHHHH
Confidence 887764
No 78
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.64 E-value=1.1e-14 Score=105.55 Aligned_cols=189 Identities=15% Similarity=0.097 Sum_probs=103.7
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC--CCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP--LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
|+.+|+.++++|+||.|.|...+.. .+.+.+.+.+.+.+...+ +..+|.++|.|+||++|..+|..++++++++|.+
T Consensus 214 l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~ 292 (411)
T PF06500_consen 214 LAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVAL 292 (411)
T ss_dssp CHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEE
T ss_pred HHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeee
Confidence 5678999999999999998653322 234556667777777664 4468999999999999999999999999999999
Q ss_pred ccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCC--cccHHHHHHhcCccccchh
Q 026718 80 SALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSP--VEDWALATMLMRPLGLFSE 157 (234)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 157 (234)
+++....-... ..... .+..+.+.+..... ..+.......+...+..
T Consensus 293 Ga~vh~~ft~~-----~~~~~------------------------~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk-- 341 (411)
T PF06500_consen 293 GAPVHHFFTDP-----EWQQR------------------------VPDMYLDVLASRLGMAAVSDESLRGELNKFSLK-- 341 (411)
T ss_dssp S---SCGGH-H-----HHHTT------------------------S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTT--
T ss_pred CchHhhhhccH-----HHHhc------------------------CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcc--
Confidence 98653221100 00000 01111111111111 11111222212221111
Q ss_pred hhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCC-cceeecChHHHHHHHHHHhh
Q 026718 158 EDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSD-HMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 158 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~p~~~~~~i~~fl~ 231 (234)
....+ ..+...+|+|.+.|++|.++|.+..+.++....+.+...++... |.-+ +.-...+.+||+
T Consensus 342 ----~qGlL-~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~ 407 (411)
T PF06500_consen 342 ----TQGLL-SGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHMGY----PQALDEIYKWLE 407 (411)
T ss_dssp ----TTTTT-TSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHHHH----HHHHHHHHHHHH
T ss_pred ----hhccc-cCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccccch----HHHHHHHHHHHH
Confidence 11111 01222779999999999999999999888887777888888554 4332 234455566654
No 79
>PRK11460 putative hydrolase; Provisional
Probab=99.62 E-value=1.7e-14 Score=99.84 Aligned_cols=105 Identities=12% Similarity=0.040 Sum_probs=77.7
Q ss_pred CCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccc
Q 026718 47 DKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGP 126 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (234)
.++++++|||+||.+++.++.++|+.+.+++.+++..+.. . .
T Consensus 102 ~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~----------------------------------~----~ 143 (232)
T PRK11460 102 ASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL----------------------------------P----E 143 (232)
T ss_pred hhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc----------------------------------c----c
Confidence 4689999999999999999999998888777665421100 0 0
Q ss_pred hhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC----CC
Q 026718 127 LYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP----PH 202 (234)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 202 (234)
. .. .+.|+++++|++|.++|.+..+.+.+.+. ++
T Consensus 144 ----------~---------------~~-----------------~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~ 181 (232)
T PRK11460 144 ----------T---------------AP-----------------TATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDV 181 (232)
T ss_pred ----------c---------------cc-----------------CCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCe
Confidence 0 00 05699999999999999998887776653 45
Q ss_pred cEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 203 QVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 203 ~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
++++++++||.+..+..+.+.+.|.+++.
T Consensus 182 ~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 182 TLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 78889999999976666666666666653
No 80
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.61 E-value=8e-14 Score=102.01 Aligned_cols=81 Identities=14% Similarity=0.210 Sum_probs=65.5
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC-----Cccccee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF-----PNKISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~l 76 (234)
|.. |+.|+..|+..-+..+.... .++++++++-+.++++++ +.+ ++++|+|+||..++.+++.+ |++++++
T Consensus 126 Ll~-g~dVYl~DW~~p~~vp~~~~-~f~ldDYi~~l~~~i~~~-G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sl 201 (406)
T TIGR01849 126 LLP-DHDVYITDWVNARMVPLSAG-KFDLEDYIDYLIEFIRFL-GPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSM 201 (406)
T ss_pred HhC-CCcEEEEeCCCCCCCchhcC-CCCHHHHHHHHHHHHHHh-CCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceE
Confidence 445 99999999987775543344 379999999999999998 666 99999999999977766654 6679999
Q ss_pred EEeccCCCCC
Q 026718 77 VFVSALKPGP 86 (234)
Q Consensus 77 vl~~~~~~~~ 86 (234)
++++++....
T Consensus 202 tlm~~PID~~ 211 (406)
T TIGR01849 202 TLMGGPIDAR 211 (406)
T ss_pred EEEecCccCC
Confidence 9999877544
No 81
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.60 E-value=1.3e-14 Score=104.50 Aligned_cols=206 Identities=14% Similarity=0.090 Sum_probs=106.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCc---ccce
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPN---KISV 75 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~ 75 (234)
+.++||+|++++.||+|.|+-.....|+. .+.+|+.++++++ ....++..+|.||||.+.+.|..+..+ .+.+
T Consensus 150 a~~~G~r~VVfN~RG~~g~~LtTpr~f~a-g~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a 228 (409)
T KOG1838|consen 150 AQRKGYRVVVFNHRGLGGSKLTTPRLFTA-GWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAA 228 (409)
T ss_pred HHhCCcEEEEECCCCCCCCccCCCceeec-CCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeE
Confidence 35789999999999999998655433322 2344555555544 266789999999999999999887643 3455
Q ss_pred eEEeccCCCCC-Ccchhh-hhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCc--
Q 026718 76 AVFVSALKPGP-DLNIST-LNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRP-- 151 (234)
Q Consensus 76 lvl~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 151 (234)
+++++|.-... ...... ....+-. ..+...+........ ..........+...+. ............
T Consensus 229 ~~v~~Pwd~~~~~~~~~~~~~~~~y~---~~l~~~l~~~~~~~r---~~~~~~~vd~d~~~~~---~SvreFD~~~t~~~ 299 (409)
T KOG1838|consen 229 VAVCNPWDLLAASRSIETPLYRRFYN---RALTLNLKRIVLRHR---HTLFEDPVDFDVILKS---RSVREFDEALTRPM 299 (409)
T ss_pred EEEeccchhhhhhhHHhcccchHHHH---HHHHHhHHHHHhhhh---hhhhhccchhhhhhhc---CcHHHHHhhhhhhh
Confidence 55555542210 000000 0000000 000000000000000 0000000000000000 111111111111
Q ss_pred --cccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHH-HHHHHHhCCCCcEEEccCCCcceeecC
Q 026718 152 --LGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDL-AMWMIKRNPPHQVEEIKDSDHMVMMSK 218 (234)
Q Consensus 152 --~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~ 218 (234)
....... +...........+++|+++|++.+|+++|++. -.......|++-+++-..+||..++|.
T Consensus 300 ~gf~~~deY-Y~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 300 FGFKSVDEY-YKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cCCCcHHHH-HhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 1111111 33333344445558999999999999999863 444556668877888888999999986
No 82
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.59 E-value=1.2e-13 Score=109.92 Aligned_cols=80 Identities=13% Similarity=0.054 Sum_probs=62.2
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC-------------------CCCceEEEeeChhHHHH
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP-------------------LDKKVILVGHSYGGLAV 62 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~-------------------~~~~~~lvGhS~Gg~~a 62 (234)
|+.+||.|+..|.||+|.|++.... .+ .+..+|..++|+.+. ...+|.++|.|+||.++
T Consensus 275 ~~~rGYaVV~~D~RGtg~SeG~~~~-~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 275 FLPRGFAVVYVSGIGTRGSDGCPTT-GD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred HHhCCeEEEEEcCCCCCCCCCcCcc-CC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 4678999999999999999886431 22 344556555555552 15799999999999999
Q ss_pred HHHHHhCCcccceeEEeccCC
Q 026718 63 AQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 63 ~~~a~~~p~~v~~lvl~~~~~ 83 (234)
+.+|...|+.++++|.+++..
T Consensus 353 ~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 353 NAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHhhCCCcceEEEeeCCCC
Confidence 999998888999999877653
No 83
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=4.2e-14 Score=93.23 Aligned_cols=211 Identities=15% Similarity=0.121 Sum_probs=114.9
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC--CCCchhhhhh-HHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCcccce
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH--NLRSISDFFK-PLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNKISV 75 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~-~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 75 (234)
+++.||+|+++|+||.|.|..+.. ..+++.|++. |+...+..+ ....+...||||+||.+.-.+ .+++ +...
T Consensus 53 a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~-~~~~-k~~a 130 (281)
T COG4757 53 AAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLL-GQHP-KYAA 130 (281)
T ss_pred hhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccc-ccCc-ccce
Confidence 457899999999999999986432 3367777664 555555554 156789999999999955444 4455 5555
Q ss_pred eEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhc---CCcccHHHHHHhcCcc
Q 026718 76 AVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQL---SPVEDWALATMLMRPL 152 (234)
Q Consensus 76 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 152 (234)
....+......+.. ..... ......+.. ..+. ...+.. .+.+.+... .+-..........+..
T Consensus 131 ~~vfG~gagwsg~m-----~~~~~---l~~~~l~~l----v~p~-lt~w~g-~~p~~l~G~G~d~p~~v~RdW~RwcR~p 196 (281)
T COG4757 131 FAVFGSGAGWSGWM-----GLRER---LGAVLLWNL----VGPP-LTFWKG-YMPKDLLGLGSDLPGTVMRDWARWCRHP 196 (281)
T ss_pred eeEeccccccccch-----hhhhc---ccceeeccc----cccc-hhhccc-cCcHhhcCCCccCcchHHHHHHHHhcCc
Confidence 55555443322211 11000 000000000 0000 000111 111111111 1111222222333322
Q ss_pred ccchhhh-hhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcE--EEccC----CCcceeecCh-HHHHH
Q 026718 153 GLFSEED-MSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQV--EEIKD----SDHMVMMSKP-LELWA 224 (234)
Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~--~~~~~----~gH~~~~~~p-~~~~~ 224 (234)
..+..+. +.... .......+|++++...+|..+|+...+.+.+..+++.+ ..++. -||+-.+.+| |.+.+
T Consensus 197 ~y~fddp~~~~~~--q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk 274 (281)
T COG4757 197 RYYFDDPAMRNYR--QVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWK 274 (281)
T ss_pred cccccChhHhHHH--HHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHH
Confidence 2221110 11000 01112278999999999999999999999998887644 44443 5999998888 77777
Q ss_pred HHHHHh
Q 026718 225 HLLSIA 230 (234)
Q Consensus 225 ~i~~fl 230 (234)
.+.+|+
T Consensus 275 ~~L~w~ 280 (281)
T COG4757 275 EMLGWF 280 (281)
T ss_pred HHHHhh
Confidence 777765
No 84
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.57 E-value=7.8e-14 Score=105.12 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=66.0
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHH----HHHhCCc-cc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQ----SMERFPN-KI 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~----~a~~~p~-~v 73 (234)
|.++||+|+.+|+++-+.+. ...+++++++.+.+.++.+ .+.+++.++|+|+||.++.. +++++++ +|
T Consensus 243 lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V 318 (560)
T TIGR01839 243 CLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKV 318 (560)
T ss_pred HHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCce
Confidence 56789999999999876553 2368899988877777765 46789999999999998886 7888886 79
Q ss_pred ceeEEeccCCCCC
Q 026718 74 SVAVFVSALKPGP 86 (234)
Q Consensus 74 ~~lvl~~~~~~~~ 86 (234)
++++++.+.....
T Consensus 319 ~sltllatplDf~ 331 (560)
T TIGR01839 319 NSLTYLVSLLDST 331 (560)
T ss_pred eeEEeeecccccC
Confidence 9999998876543
No 85
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.56 E-value=1.9e-14 Score=106.40 Aligned_cols=81 Identities=15% Similarity=0.062 Sum_probs=66.5
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC-----CCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP-----LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
.+|+||++|++|+|.|..+... ......++++.++++.+. +.++++||||||||.+|..++..+|++|.+++++
T Consensus 72 ~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgL 150 (442)
T TIGR03230 72 PSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGL 150 (442)
T ss_pred CCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEE
Confidence 3699999999999988765432 344677777777777651 4689999999999999999999999999999999
Q ss_pred ccCCCCC
Q 026718 80 SALKPGP 86 (234)
Q Consensus 80 ~~~~~~~ 86 (234)
+|+.+..
T Consensus 151 DPAgP~F 157 (442)
T TIGR03230 151 DPAGPTF 157 (442)
T ss_pred cCCCCcc
Confidence 9986543
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.56 E-value=4.7e-14 Score=97.09 Aligned_cols=154 Identities=16% Similarity=0.111 Sum_probs=92.1
Q ss_pred CCCCCceEEeecCCCCCC-CC-CCCCCCC--------chhhhhhHHHHHHHhcC-----CCCceEEEeeChhHHHHHHHH
Q 026718 2 IKSSGHNVTAFDLAASGV-EP-QQVHNLR--------SISDFFKPLIDFMAALP-----LDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~-S~-~~~~~~~--------~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a 66 (234)
|+++||.|++||+-+-.. .. ....... ..+...+++.+.++.+. ..+++.++|+||||.+++.++
T Consensus 37 lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 37 LAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 578899999999854433 11 1111000 12345667766666652 246899999999999999998
Q ss_pred HhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHH
Q 026718 67 ERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALAT 146 (234)
Q Consensus 67 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (234)
... +.+++.+..-|..... ..
T Consensus 117 ~~~-~~~~a~v~~yg~~~~~-----------------------------------------------------~~----- 137 (218)
T PF01738_consen 117 ARD-PRVDAAVSFYGGSPPP-----------------------------------------------------PP----- 137 (218)
T ss_dssp CCT-TTSSEEEEES-SSSGG-----------------------------------------------------GH-----
T ss_pred hhc-cccceEEEEcCCCCCC-----------------------------------------------------cc-----
Confidence 876 5788887776510000 00
Q ss_pred HhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhC----CCCcEEEccCCCcceeecCh---
Q 026718 147 MLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRN----PPHQVEEIKDSDHMVMMSKP--- 219 (234)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~p--- 219 (234)
... ....++|+++++|++|+.++.+..+.+.+.+ ...++++++|++|.+.....
T Consensus 138 -------------~~~------~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~ 198 (218)
T PF01738_consen 138 -------------LED------APKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPY 198 (218)
T ss_dssp -------------HHH------GGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT-
T ss_pred -------------hhh------hcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCccc
Confidence 000 0111789999999999999998766655544 46799999999998876432
Q ss_pred -----HHHHHHHHHHhhcc
Q 026718 220 -----LELWAHLLSIAGNY 233 (234)
Q Consensus 220 -----~~~~~~i~~fl~~~ 233 (234)
+.-.+.+.+|+++|
T Consensus 199 ~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 199 DPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp -HHHHHHHHHHHHHHHCC-
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 33456777887765
No 87
>PLN00021 chlorophyllase
Probab=99.55 E-value=2.2e-13 Score=97.78 Aligned_cols=81 Identities=23% Similarity=0.182 Sum_probs=53.0
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc------CCCCceEEEeeChhHHHHHHHHHhCCc----
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL------PLDKKVILVGHSYGGLAVAQSMERFPN---- 71 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~---- 71 (234)
|+++||.|+++|++|++.+.... ...+..+..+.+.+.++.+ .+.++++++||||||.+++.+|..+++
T Consensus 75 Las~G~~VvapD~~g~~~~~~~~-~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~ 153 (313)
T PLN00021 75 IASHGFIVVAPQLYTLAGPDGTD-EIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLP 153 (313)
T ss_pred HHhCCCEEEEecCCCcCCCCchh-hHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccc
Confidence 56789999999999975432111 0111222223333222221 134789999999999999999998874
Q ss_pred -ccceeEEeccCC
Q 026718 72 -KISVAVFVSALK 83 (234)
Q Consensus 72 -~v~~lvl~~~~~ 83 (234)
+++++|+++|..
T Consensus 154 ~~v~ali~ldPv~ 166 (313)
T PLN00021 154 LKFSALIGLDPVD 166 (313)
T ss_pred cceeeEEeecccc
Confidence 578888888753
No 88
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.52 E-value=4.6e-13 Score=91.69 Aligned_cols=81 Identities=15% Similarity=0.073 Sum_probs=55.0
Q ss_pred CCCceEEeecCCCCCCCCCCCC---CC--CchhhhhhHHHHHHHhc-----CCCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 4 SSGHNVTAFDLAASGVEPQQVH---NL--RSISDFFKPLIDFMAAL-----PLDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~---~~--~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
+.||.|++||.+|+|.+..... .. ........++.++++.+ -+.++++|+|||+||.+++.++.++|+.+
T Consensus 41 ~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~ 120 (212)
T TIGR01840 41 RYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVF 120 (212)
T ss_pred hCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhh
Confidence 4689999999999975432110 00 00111233333444333 13468999999999999999999999999
Q ss_pred ceeEEeccCCC
Q 026718 74 SVAVFVSALKP 84 (234)
Q Consensus 74 ~~lvl~~~~~~ 84 (234)
.+++.+++...
T Consensus 121 ~~~~~~~g~~~ 131 (212)
T TIGR01840 121 AGGASNAGLPY 131 (212)
T ss_pred eEEEeecCCcc
Confidence 99988887543
No 89
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.49 E-value=3.6e-13 Score=92.48 Aligned_cols=124 Identities=16% Similarity=0.105 Sum_probs=80.4
Q ss_pred hhhhhhHHHHHHHhc----CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcc
Q 026718 30 ISDFFKPLIDFMAAL----PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLL 105 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (234)
+.+.++.+.++|+.. -..+++++.|+|.||++++.++.++|+.+.++|.+++..+..... .
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------~------- 147 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------E------- 147 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------H-------
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------c-------
Confidence 444445555555543 245789999999999999999999999999999999865422100 0
Q ss_pred cccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCc
Q 026718 106 DCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDL 185 (234)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 185 (234)
.. . ....++|+++++|++|.
T Consensus 148 ----------------------------------~~------------------~--------~~~~~~pi~~~hG~~D~ 167 (216)
T PF02230_consen 148 ----------------------------------DR------------------P--------EALAKTPILIIHGDEDP 167 (216)
T ss_dssp ----------------------------------CC------------------H--------CCCCTS-EEEEEETT-S
T ss_pred ----------------------------------cc------------------c--------cccCCCcEEEEecCCCC
Confidence 00 0 00005799999999999
Q ss_pred cccHHHHHHHHHhC----CCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 186 VTEKDLAMWMIKRN----PPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 186 ~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
++|.+..+...+.+ .+++++.++++||.+. .+..+.+.+||++
T Consensus 168 vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 168 VVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp SSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 99988766666554 3568899999999885 3344557777765
No 90
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.48 E-value=2.3e-12 Score=90.69 Aligned_cols=86 Identities=22% Similarity=0.382 Sum_probs=72.4
Q ss_pred CCCceEEeecCCCCCCCCCC-----CCCCCchhhhhhHHHHHHHhc-C----CCCceEEEeeChhHHHHHHHHHhCC---
Q 026718 4 SSGHNVTAFDLAASGVEPQQ-----VHNLRSISDFFKPLIDFMAAL-P----LDKKVILVGHSYGGLAVAQSMERFP--- 70 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~~l~~~l~~~-~----~~~~~~lvGhS~Gg~~a~~~a~~~p--- 70 (234)
..++.|+++.+.||-.++.. ....++++++++...++++++ . ...+++|+|||.|++++++++.+++
T Consensus 30 ~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~ 109 (266)
T PF10230_consen 30 NPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLK 109 (266)
T ss_pred CCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccC
Confidence 45799999999999877665 446789999999999999887 2 5678999999999999999999999
Q ss_pred cccceeEEeccCCCCCCcc
Q 026718 71 NKISVAVFVSALKPGPDLN 89 (234)
Q Consensus 71 ~~v~~lvl~~~~~~~~~~~ 89 (234)
.+|.+++++-|.......+
T Consensus 110 ~~V~~~~lLfPTi~~ia~S 128 (266)
T PF10230_consen 110 FRVKKVILLFPTIEDIAKS 128 (266)
T ss_pred CceeEEEEeCCccccccCC
Confidence 7899999999886544433
No 91
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.48 E-value=6.1e-13 Score=95.64 Aligned_cols=188 Identities=14% Similarity=0.030 Sum_probs=100.0
Q ss_pred CCCCceEEeecCCCCCC-CCCCC--------C----------CCCchhhhhhHHHHHHHhc---C--CCCceEEEeeChh
Q 026718 3 KSSGHNVTAFDLAASGV-EPQQV--------H----------NLRSISDFFKPLIDFMAAL---P--LDKKVILVGHSYG 58 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~-S~~~~--------~----------~~~~~~~~~~~l~~~l~~~---~--~~~~~~lvGhS~G 58 (234)
+..||.|+.+|.||+|. |.... + ..+-+..+..|....++.+ + +.+++.+.|.|+|
T Consensus 106 a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqG 185 (320)
T PF05448_consen 106 AAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQG 185 (320)
T ss_dssp HHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred ccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCc
Confidence 46899999999999993 32111 0 0111223445555555544 2 3468999999999
Q ss_pred HHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhc-C
Q 026718 59 GLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQL-S 137 (234)
Q Consensus 59 g~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 137 (234)
|.+++.+|+..| +|++++...|+....... +... .....-..+...+... .
T Consensus 186 G~lal~~aaLd~-rv~~~~~~vP~l~d~~~~-------~~~~--------------------~~~~~y~~~~~~~~~~d~ 237 (320)
T PF05448_consen 186 GGLALAAAALDP-RVKAAAADVPFLCDFRRA-------LELR--------------------ADEGPYPEIRRYFRWRDP 237 (320)
T ss_dssp HHHHHHHHHHSS-T-SEEEEESESSSSHHHH-------HHHT----------------------STTTHHHHHHHHHHSC
T ss_pred hHHHHHHHHhCc-cccEEEecCCCccchhhh-------hhcC--------------------CccccHHHHHHHHhccCC
Confidence 999999999875 699999888765422110 0000 0000001111222211 1
Q ss_pred CcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC-CCcEEEccCCCcceee
Q 026718 138 PVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP-PHQVEEIKDSDHMVMM 216 (234)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 216 (234)
........... +.-.........+++|+++-.|-.|.++||...-...+.++ ..++.++|..||..
T Consensus 238 ~~~~~~~v~~~-----------L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~-- 304 (320)
T PF05448_consen 238 HHEREPEVFET-----------LSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEY-- 304 (320)
T ss_dssp THCHHHHHHHH-----------HHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SST--
T ss_pred CcccHHHHHHH-----------HhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCc--
Confidence 11111111110 11111112234458999999999999999999999999887 56899999999944
Q ss_pred cChHHH-HHHHHHHhhcc
Q 026718 217 SKPLEL-WAHLLSIAGNY 233 (234)
Q Consensus 217 ~~p~~~-~~~i~~fl~~~ 233 (234)
+.++ .+...+|+.+|
T Consensus 305 --~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 305 --GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp --THHHHHHHHHHHHHH-
T ss_pred --hhhHHHHHHHHHHhcC
Confidence 3444 67777887654
No 92
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.47 E-value=1.2e-12 Score=90.92 Aligned_cols=194 Identities=15% Similarity=0.134 Sum_probs=109.6
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC---CcccceeEEeccC
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF---PNKISVAVFVSAL 82 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~---p~~v~~lvl~~~~ 82 (234)
.+.|+.++.+|.+....+ ..+++++++...+.|.......+++|+|||+||.+|+++|.+. ...+..++++++.
T Consensus 27 ~~~v~~i~~~~~~~~~~~---~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 27 VIGVYGIEYPGRGDDEPP---PDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EEEEEEECSTTSCTTSHE---ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred eEEEEEEecCCCCCCCCC---CCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 388999999999833322 2589999999888888773555999999999999999999754 3458999999976
Q ss_pred CCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhh-cCCcccHHHHHHhcCccccchhhhhh
Q 026718 83 KPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQ-LSPVEDWALATMLMRPLGLFSEEDMS 161 (234)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (234)
.+..... ......... .. ...+...... ....................... +.
T Consensus 104 ~p~~~~~-~~~~~~~~~---~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 157 (229)
T PF00975_consen 104 PPSIKER-PRSREPSDE---QF---------------------IEELRRIGGTPDASLEDEELLARLLRALRDDFQA-LE 157 (229)
T ss_dssp STTCHSC-HHHHHCHHH---HH---------------------HHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHH-HH
T ss_pred CCCcccc-hhhhhhhHH---HH---------------------HHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHH-Hh
Confidence 5543111 100000000 00 0000000000 00000000000000000000000 00
Q ss_pred hhhcccccccCCccEEEEeeCCCccccHH---HHHHHHHhCC-CCcEEEccCCCcceeec-ChHHHHHHHHHHh
Q 026718 162 KELKLTWERYGTVRRVYIISEKDLVTEKD---LAMWMIKRNP-PHQVEEIKDSDHMVMMS-KPLELWAHLLSIA 230 (234)
Q Consensus 162 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~---~~~~~~~~~~-~~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl 230 (234)
... ........+|.++.....|+..... ....+.+..+ ..+++.++ ++|+.++. +..++++.|.++|
T Consensus 158 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 158 NYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp TCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred hcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 000 0001011467888999999887766 3334666665 45788898 89999987 6788888888875
No 93
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.47 E-value=4.5e-13 Score=87.62 Aligned_cols=122 Identities=20% Similarity=0.237 Sum_probs=81.2
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHH-HhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCccc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSM-ERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLD 106 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (234)
.+.+++.+.+.+.+... .+++++||||+|+..++.++ .....+|.+++|++|+-...... ....
T Consensus 37 P~~~~W~~~l~~~i~~~--~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~---~~~~---------- 101 (171)
T PF06821_consen 37 PDLDEWVQALDQAIDAI--DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP---FPPE---------- 101 (171)
T ss_dssp --HHHHHHHHHHCCHC---TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC---CTCG----------
T ss_pred CCHHHHHHHHHHHHhhc--CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc---hhhh----------
Confidence 46777777777777655 56799999999999999999 77788999999999874320000 0000
Q ss_pred ccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCcc
Q 026718 107 CKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLV 186 (234)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 186 (234)
.. . +. ... .....+|.++|.+++|++
T Consensus 102 --~~------------~------------------------------------f~---~~p-~~~l~~~~~viaS~nDp~ 127 (171)
T PF06821_consen 102 --LD------------G------------------------------------FT---PLP-RDPLPFPSIVIASDNDPY 127 (171)
T ss_dssp --GC------------C------------------------------------CT---TSH-CCHHHCCEEEEEETTBSS
T ss_pred --cc------------c------------------------------------cc---cCc-ccccCCCeEEEEcCCCCc
Confidence 00 0 00 000 000156789999999999
Q ss_pred ccHHHHHHHHHhCCCCcEEEccCCCcceeecCh
Q 026718 187 TEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKP 219 (234)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 219 (234)
+|.+.++.+++.+ +++++.++++||+.-.+.-
T Consensus 128 vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G~ 159 (171)
T PF06821_consen 128 VPFERAQRLAQRL-GAELIILGGGGHFNAASGF 159 (171)
T ss_dssp S-HHHHHHHHHHH-T-EEEEETS-TTSSGGGTH
T ss_pred cCHHHHHHHHHHc-CCCeEECCCCCCcccccCC
Confidence 9999999999998 5699999999999876543
No 94
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.45 E-value=1.7e-12 Score=100.96 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=66.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC----CCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP----LDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
|+++||.|+++|+||+|.|++.... ++ ...++|+.++++.+. ...++.++|||+||.+++.+|..+|+.++++|
T Consensus 49 l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv 126 (550)
T TIGR00976 49 FVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIA 126 (550)
T ss_pred HHhCCcEEEEEeccccccCCCceEe-cC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEe
Confidence 4578999999999999999876442 23 567788888887661 23689999999999999999999999999999
Q ss_pred EeccCCC
Q 026718 78 FVSALKP 84 (234)
Q Consensus 78 l~~~~~~ 84 (234)
..++...
T Consensus 127 ~~~~~~d 133 (550)
T TIGR00976 127 PQEGVWD 133 (550)
T ss_pred ecCcccc
Confidence 8877543
No 95
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.44 E-value=7.6e-12 Score=82.74 Aligned_cols=147 Identities=14% Similarity=0.135 Sum_probs=85.9
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDC 107 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (234)
.......+.+.++++.. ..+.+.|||.||||+.|..++.+++ +.+ |+++|+..... .+..... .
T Consensus 40 ~~p~~a~~~l~~~i~~~-~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~-----~l~~~iG-------~ 103 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEEL-KPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYE-----LLQDYIG-------E 103 (187)
T ss_pred cCHHHHHHHHHHHHHhC-CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHH-----HHHHhhC-------c
Confidence 35666777888888887 6666999999999999999999886 333 88998764321 1111100 0
Q ss_pred cccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhccccc-ccCCccEEEEeeCCCcc
Q 026718 108 KYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWE-RYGTVRRVYIISEKDLV 186 (234)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~P~l~i~g~~D~~ 186 (234)
...... .....+.... +.....+... .....+++++.++.|.+
T Consensus 104 ~~~~~~-----~e~~~~~~~~-------------------------------~~~l~~l~~~~~~~~~~~lvll~~~DEv 147 (187)
T PF05728_consen 104 QTNPYT-----GESYELTEEH-------------------------------IEELKALEVPYPTNPERYLVLLQTGDEV 147 (187)
T ss_pred cccCCC-----CccceechHh-------------------------------hhhcceEeccccCCCccEEEEEecCCcc
Confidence 000000 0000000000 0000000000 01156899999999999
Q ss_pred ccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 187 TEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
++.+. ..+.+.++..++.+|++|-+ ++-++....|.+|+.
T Consensus 148 Ld~~~---a~~~~~~~~~~i~~ggdH~f--~~f~~~l~~i~~f~~ 187 (187)
T PF05728_consen 148 LDYRE---AVAKYRGCAQIIEEGGDHSF--QDFEEYLPQIIAFLQ 187 (187)
T ss_pred cCHHH---HHHHhcCceEEEEeCCCCCC--ccHHHHHHHHHHhhC
Confidence 99843 34444555566678889976 456677778888763
No 96
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.43 E-value=2.7e-13 Score=96.00 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=62.7
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc-----CCCCceEEEeeChhHHHHHHHHHhCCcccceeEE
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL-----PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVF 78 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 78 (234)
..+|+|+++|++|++.+..+. ...+....++++.++++.+ ...+++++|||||||.+|..++.++|++|.++++
T Consensus 64 ~~~~nVi~vD~~~~~~~~y~~-a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~ 142 (275)
T cd00707 64 RGDYNVIVVDWGRGANPNYPQ-AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITG 142 (275)
T ss_pred cCCCEEEEEECccccccChHH-HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEE
Confidence 457999999999984433221 1235555666666666654 1457899999999999999999999999999999
Q ss_pred eccCCCCC
Q 026718 79 VSALKPGP 86 (234)
Q Consensus 79 ~~~~~~~~ 86 (234)
++|+.+..
T Consensus 143 LDPa~p~f 150 (275)
T cd00707 143 LDPAGPLF 150 (275)
T ss_pred ecCCcccc
Confidence 99986643
No 97
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.41 E-value=7.4e-13 Score=92.40 Aligned_cols=76 Identities=17% Similarity=0.261 Sum_probs=50.7
Q ss_pred CCCCceEEeecCC----CCCCCCCCCCCCCchhhhhhHHHHHHHhc---C----CCCceEEEeeChhHHHHHHHHHhCC-
Q 026718 3 KSSGHNVTAFDLA----ASGVEPQQVHNLRSISDFFKPLIDFMAAL---P----LDKKVILVGHSYGGLAVAQSMERFP- 70 (234)
Q Consensus 3 ~~~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~----~~~~~~lvGhS~Gg~~a~~~a~~~p- 70 (234)
...+|.|+-+-++ |+| ..++++-++||.++++++ . +.++|+|+|||.|+.-+++|+....
T Consensus 60 ~~~~wsl~q~~LsSSy~G~G--------~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 60 EETGWSLFQVQLSSSYSGWG--------TSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp T-TT-EEEEE--GGGBTTS---------S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred ccCCeEEEEEEecCccCCcC--------cchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 4568888888765 344 247888899998888877 1 3578999999999999999987652
Q ss_pred ----cccceeEEeccCCCCC
Q 026718 71 ----NKISVAVFVSALKPGP 86 (234)
Q Consensus 71 ----~~v~~lvl~~~~~~~~ 86 (234)
..|+++|+-+|.....
T Consensus 132 ~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 132 SPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp ---CCCEEEEEEEEE---TT
T ss_pred cccccceEEEEEeCCCCChh
Confidence 5699999999876443
No 98
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.40 E-value=1.3e-11 Score=87.60 Aligned_cols=212 Identities=11% Similarity=0.087 Sum_probs=114.1
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC---CCCchhhh-------hh---HHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH---NLRSISDF-------FK---PLIDFMAALPLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~---~~~~~~~~-------~~---~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
|.++|+..+.+..|-||.-..... ...+..|+ +. .+..+++.. +..++.+.|.||||.+|...|..
T Consensus 117 Ll~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 117 LLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASN 195 (348)
T ss_pred HHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhc
Confidence 456699999999999997654332 11222222 12 233444444 78899999999999999999999
Q ss_pred CCcccceeEEeccCCCCCC--cchhh---hhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHH
Q 026718 69 FPNKISVAVFVSALKPGPD--LNIST---LNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWA 143 (234)
Q Consensus 69 ~p~~v~~lvl~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (234)
.|..+..+-.+++...... ..... ....+.+ +.....+..... ......... ..........+.+
T Consensus 196 ~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~---q~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~E 265 (348)
T PF09752_consen 196 WPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEK---QFEDTVYEEEIS------DIPAQNKSL-PLDSMEERRRDRE 265 (348)
T ss_pred CCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHH---Hhcccchhhhhc------ccccCcccc-cchhhccccchHH
Confidence 9988887777765432210 00000 0001111 000000000000 000000000 0000000001111
Q ss_pred HHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcc-eeecChHHH
Q 026718 144 LATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHM-VMMSKPLEL 222 (234)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~-~~~~~p~~~ 222 (234)
....+...... +.....+..+. ..-.++++.+++|..+|......+.+.+|++++.+++ +||. .++-+.+.|
T Consensus 266 a~~~m~~~md~-----~T~l~nf~~P~-dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~-gGHVsA~L~~q~~f 338 (348)
T PF09752_consen 266 ALRFMRGVMDS-----FTHLTNFPVPV-DPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLP-GGHVSAYLLHQEAF 338 (348)
T ss_pred HHHHHHHHHHh-----hccccccCCCC-CCCcEEEEEecCceEechhhcchHHHhCCCCeEEEec-CCcEEEeeechHHH
Confidence 11111100000 11111111111 1336889999999999998888999999999999999 6996 556788999
Q ss_pred HHHHHHHhh
Q 026718 223 WAHLLSIAG 231 (234)
Q Consensus 223 ~~~i~~fl~ 231 (234)
.+.|.+-++
T Consensus 339 R~AI~Daf~ 347 (348)
T PF09752_consen 339 RQAIYDAFE 347 (348)
T ss_pred HHHHHHHhh
Confidence 999988765
No 99
>PRK10162 acetyl esterase; Provisional
Probab=99.34 E-value=8e-11 Score=85.53 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=51.0
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhC------CcccceeE
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERF------PNKISVAV 77 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lv 77 (234)
.|+.|+.+|+|.......+.. ..+..+.++.+.+..+.++ +.++++++|+|+||.+++.++... +.++.+++
T Consensus 111 ~g~~Vv~vdYrlape~~~p~~-~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~v 189 (318)
T PRK10162 111 SGCTVIGIDYTLSPEARFPQA-IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVL 189 (318)
T ss_pred cCCEEEEecCCCCCCCCCCCc-HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheE
Confidence 589999999997543322211 1122223333333333442 346899999999999999988753 35788999
Q ss_pred EeccCCC
Q 026718 78 FVSALKP 84 (234)
Q Consensus 78 l~~~~~~ 84 (234)
++.|...
T Consensus 190 l~~p~~~ 196 (318)
T PRK10162 190 LWYGLYG 196 (318)
T ss_pred EECCccC
Confidence 9987654
No 100
>COG0400 Predicted esterase [General function prediction only]
Probab=99.34 E-value=1.4e-11 Score=82.47 Aligned_cols=113 Identities=15% Similarity=0.065 Sum_probs=81.5
Q ss_pred hhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCccccccccc
Q 026718 34 FKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYD 112 (234)
Q Consensus 34 ~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (234)
++.+..+.++. -+.++++++|+|-||.+++.+..++|+.+++++++++..+.....
T Consensus 84 ~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~----------------------- 140 (207)
T COG0400 84 AEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL----------------------- 140 (207)
T ss_pred HHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc-----------------------
Confidence 33344444444 134899999999999999999999999999999999876533110
Q ss_pred CCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHH
Q 026718 113 DGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLA 192 (234)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 192 (234)
. ......|+++++|+.|+++|....
T Consensus 141 ---------------------------------------~----------------~~~~~~pill~hG~~Dpvvp~~~~ 165 (207)
T COG0400 141 ---------------------------------------L----------------PDLAGTPILLSHGTEDPVVPLALA 165 (207)
T ss_pred ---------------------------------------c----------------cccCCCeEEEeccCcCCccCHHHH
Confidence 0 000167999999999999998877
Q ss_pred HHHHHhC----CCCcEEEccCCCcceeecChHHHHHH
Q 026718 193 MWMIKRN----PPHQVEEIKDSDHMVMMSKPLELWAH 225 (234)
Q Consensus 193 ~~~~~~~----~~~~~~~~~~~gH~~~~~~p~~~~~~ 225 (234)
.++.+.+ -+++..+++ +||.+..+.-+...+.
T Consensus 166 ~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~w 201 (207)
T COG0400 166 EALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSW 201 (207)
T ss_pred HHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHH
Confidence 7666554 356788888 9998866554444443
No 101
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.32 E-value=1.1e-11 Score=89.33 Aligned_cols=80 Identities=15% Similarity=0.257 Sum_probs=60.9
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhh-hHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCcc-ccee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFF-KPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNK-ISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~-~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~l 76 (234)
|.++|+.|+.+|+++-..+.. ..++++++ +.+.+.++.. .+.+++.++|+|.||.++..+++.++.+ |+++
T Consensus 135 l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~ 210 (445)
T COG3243 135 LLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSL 210 (445)
T ss_pred HHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccc
Confidence 457899999999987766654 24677766 4444444332 3779999999999999999999988877 9999
Q ss_pred EEeccCCCC
Q 026718 77 VFVSALKPG 85 (234)
Q Consensus 77 vl~~~~~~~ 85 (234)
+++.+....
T Consensus 211 T~lts~~DF 219 (445)
T COG3243 211 TLLTSPVDF 219 (445)
T ss_pred eeeecchhh
Confidence 888775543
No 102
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.31 E-value=5.6e-11 Score=75.54 Aligned_cols=135 Identities=19% Similarity=0.181 Sum_probs=91.9
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDC 107 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (234)
...+++++.+.+.+... .++++||+||+|+.+++.++......|+|+++++|+-........ .
T Consensus 41 P~~~dWi~~l~~~v~a~--~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~---------------~ 103 (181)
T COG3545 41 PVLDDWIARLEKEVNAA--EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRP---------------K 103 (181)
T ss_pred CCHHHHHHHHHHHHhcc--CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccch---------------h
Confidence 35677777777777665 567999999999999999999887799999999986432210000 0
Q ss_pred cccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccc
Q 026718 108 KYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVT 187 (234)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 187 (234)
. ..+ +. .....+. .-|.+++.+.+|+++
T Consensus 104 ~---------------------------------------~~t---------f~---~~p~~~l-pfps~vvaSrnDp~~ 131 (181)
T COG3545 104 H---------------------------------------LMT---------FD---PIPREPL-PFPSVVVASRNDPYV 131 (181)
T ss_pred h---------------------------------------ccc---------cC---CCccccC-CCceeEEEecCCCCC
Confidence 0 000 00 0000001 448999999999999
Q ss_pred cHHHHHHHHHhCCCCcEEEccCCCcceeec---ChHHHHHHHHHHhhc
Q 026718 188 EKDLAMWMIKRNPPHQVEEIKDSDHMVMMS---KPLELWAHLLSIAGN 232 (234)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~p~~~~~~i~~fl~~ 232 (234)
+++.++.+++.++. .++.+.++||..-.+ .=.+....+.+|+.+
T Consensus 132 ~~~~a~~~a~~wgs-~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 132 SYEHAEDLANAWGS-ALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CHHHHHHHHHhccH-hheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 99999999999876 777888899976443 224455555555543
No 103
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.29 E-value=1.6e-11 Score=80.94 Aligned_cols=151 Identities=18% Similarity=0.169 Sum_probs=98.9
Q ss_pred CCCCCceEEeecC-CCCCCCCC-CCC------CCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 2 IKSSGHNVTAFDL-AASGVEPQ-QVH------NLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 2 l~~~g~~vi~~D~-~G~G~S~~-~~~------~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
++..||.|+.||+ +|--.|.. ... ...+..-.-.++..+++.+ +..+++-++|.+|||-++..+....|
T Consensus 63 ~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~ 142 (242)
T KOG3043|consen 63 VALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP 142 (242)
T ss_pred HhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch
Confidence 4677999999996 44222221 100 1123333444555555544 34788999999999999888888777
Q ss_pred cccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcC
Q 026718 71 NKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMR 150 (234)
Q Consensus 71 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (234)
.+.+.+.+-|..... ++
T Consensus 143 -~f~a~v~~hps~~d~-----------------------------------------------------~D--------- 159 (242)
T KOG3043|consen 143 -EFDAGVSFHPSFVDS-----------------------------------------------------AD--------- 159 (242)
T ss_pred -hheeeeEecCCcCCh-----------------------------------------------------hH---------
Confidence 677776665532211 00
Q ss_pred ccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC-----CCcEEEccCCCcceee-----cCh-
Q 026718 151 PLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP-----PHQVEEIKDSDHMVMM-----SKP- 219 (234)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~-----~~p- 219 (234)
....++|++++.|+.|..+|++....+.+.+. ..+++++++.+|.... +.|
T Consensus 160 ------------------~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Pe 221 (242)
T KOG3043|consen 160 ------------------IANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPE 221 (242)
T ss_pred ------------------HhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChh
Confidence 00117899999999999999988777776653 2469999999997763 334
Q ss_pred -----HHHHHHHHHHhhcc
Q 026718 220 -----LELWAHLLSIAGNY 233 (234)
Q Consensus 220 -----~~~~~~i~~fl~~~ 233 (234)
|+..+.+.+|++.|
T Consensus 222 d~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 222 DKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 44556667777654
No 104
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.28 E-value=2.8e-11 Score=86.10 Aligned_cols=81 Identities=21% Similarity=0.250 Sum_probs=57.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---C-CCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---P-LDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
++++||.|+..|.||.|.|++..... ..+-++|..++|+-+ + ...+|.++|.|++|..++.+|...|..+++++
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~ 130 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIV 130 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEE
T ss_pred HHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEE
Confidence 56789999999999999999876531 444555555555544 1 34689999999999999999998888999999
Q ss_pred EeccCCC
Q 026718 78 FVSALKP 84 (234)
Q Consensus 78 l~~~~~~ 84 (234)
...+...
T Consensus 131 p~~~~~d 137 (272)
T PF02129_consen 131 PQSGWSD 137 (272)
T ss_dssp EESE-SB
T ss_pred ecccCCc
Confidence 8877543
No 105
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.28 E-value=2.4e-11 Score=82.86 Aligned_cols=51 Identities=29% Similarity=0.452 Sum_probs=39.2
Q ss_pred hhhHHHHHHHhcC--CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 33 FFKPLIDFMAALP--LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 33 ~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
+.+...+++...+ ..++|.|+|.|.||-+|+.+|..+| .|+.+|.++|...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 4455666676653 3368999999999999999999998 7999999998654
No 106
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.27 E-value=2.4e-10 Score=79.00 Aligned_cols=153 Identities=15% Similarity=0.107 Sum_probs=104.0
Q ss_pred CCCCCCceEEeecCCCC-CCCCCCCC------C----CCchhhhhhHHHHHHHhcC-----CCCceEEEeeChhHHHHHH
Q 026718 1 MIKSSGHNVTAFDLAAS-GVEPQQVH------N----LRSISDFFKPLIDFMAALP-----LDKKVILVGHSYGGLAVAQ 64 (234)
Q Consensus 1 ~l~~~g~~vi~~D~~G~-G~S~~~~~------~----~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~ 64 (234)
+|++.||.|++||+-+. |.+..... . ..+..+...|+.+.++.+. ..+++.++|+||||.+++.
T Consensus 49 rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~ 128 (236)
T COG0412 49 RLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALL 128 (236)
T ss_pred HHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHH
Confidence 46789999999998763 33322110 0 1223567778887777761 3567999999999999999
Q ss_pred HHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHH
Q 026718 65 SMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWAL 144 (234)
Q Consensus 65 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (234)
++.+.| .+++.+..-+........ .
T Consensus 129 ~a~~~~-~v~a~v~fyg~~~~~~~~--------------------------------------------------~---- 153 (236)
T COG0412 129 AATRAP-EVKAAVAFYGGLIADDTA--------------------------------------------------D---- 153 (236)
T ss_pred hhcccC-CccEEEEecCCCCCCccc--------------------------------------------------c----
Confidence 999877 688887776543311000 0
Q ss_pred HHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC----CCcEEEccCCCcceeecC--
Q 026718 145 ATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP----PHQVEEIKDSDHMVMMSK-- 218 (234)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~-- 218 (234)
...+++|++++.|+.|..+|....+.+.+.+. ..++.+++++.|.++-+.
T Consensus 154 ------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~ 209 (236)
T COG0412 154 ------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRAD 209 (236)
T ss_pred ------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCc
Confidence 00118899999999999999886666665542 567899999889887442
Q ss_pred ------h---HHHHHHHHHHhhc
Q 026718 219 ------P---LELWAHLLSIAGN 232 (234)
Q Consensus 219 ------p---~~~~~~i~~fl~~ 232 (234)
+ +.-.+.+.+|+++
T Consensus 210 ~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 210 YHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred ccccCCHHHHHHHHHHHHHHHHH
Confidence 1 3345566666654
No 107
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.26 E-value=3e-10 Score=97.41 Aligned_cols=77 Identities=10% Similarity=0.100 Sum_probs=64.6
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh---CCcccceeEEec
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMER---FPNKISVAVFVS 80 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~ 80 (234)
..+++|+++|+||+|.+.. ..++++++++++.+.++.+...++++++||||||.+|.++|.+ .++++..+++++
T Consensus 1092 ~~~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~ 1168 (1296)
T PRK10252 1092 DPQWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLD 1168 (1296)
T ss_pred CCCCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEec
Confidence 4569999999999986532 2379999999999999887345689999999999999999985 478899999998
Q ss_pred cCC
Q 026718 81 ALK 83 (234)
Q Consensus 81 ~~~ 83 (234)
+..
T Consensus 1169 ~~~ 1171 (1296)
T PRK10252 1169 TWP 1171 (1296)
T ss_pred CCC
Confidence 754
No 108
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.25 E-value=1.4e-10 Score=75.49 Aligned_cols=76 Identities=20% Similarity=0.246 Sum_probs=60.6
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCC----cccc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFP----NKIS 74 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p----~~v~ 74 (234)
|+++|+.|+.+|-+-+=.+. .+.++.+.|+.+++++. -+.++++|+|+|+|+-+.-....+.| ++|.
T Consensus 25 l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~ 98 (192)
T PF06057_consen 25 LAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVA 98 (192)
T ss_pred HHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhhee
Confidence 67899999999977665543 46777788888877765 26789999999999988888777776 4688
Q ss_pred eeEEeccCC
Q 026718 75 VAVFVSALK 83 (234)
Q Consensus 75 ~lvl~~~~~ 83 (234)
.+++++|..
T Consensus 99 ~v~Ll~p~~ 107 (192)
T PF06057_consen 99 QVVLLSPST 107 (192)
T ss_pred EEEEeccCC
Confidence 999998754
No 109
>PRK10115 protease 2; Provisional
Probab=99.24 E-value=3e-10 Score=90.24 Aligned_cols=83 Identities=12% Similarity=0.157 Sum_probs=62.8
Q ss_pred CCCCCceEEeecCCCCCCCCCC-------CCCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQ-------VHNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
|+++||.|+.++.||-|.-... .....+++|+++-+..+++.- ...+++.+.|.|.||+++..++.++|+++
T Consensus 470 l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf 549 (686)
T PRK10115 470 LLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELF 549 (686)
T ss_pred HHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhhe
Confidence 5678999999999997644321 111246666666666665542 25678999999999999999999999999
Q ss_pred ceeEEeccCCC
Q 026718 74 SVAVFVSALKP 84 (234)
Q Consensus 74 ~~lvl~~~~~~ 84 (234)
+++|...|...
T Consensus 550 ~A~v~~vp~~D 560 (686)
T PRK10115 550 HGVIAQVPFVD 560 (686)
T ss_pred eEEEecCCchh
Confidence 99998887654
No 110
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=1.6e-10 Score=78.45 Aligned_cols=185 Identities=12% Similarity=-0.006 Sum_probs=108.8
Q ss_pred CCCCCceEEeecCCCCCCCCC----CCC----------------CCCchhhhhhHHHHHHHhc-----CCCCceEEEeeC
Q 026718 2 IKSSGHNVTAFDLAASGVEPQ----QVH----------------NLRSISDFFKPLIDFMAAL-----PLDKKVILVGHS 56 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~----~~~----------------~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS 56 (234)
++..||.|+.+|-||.|.|+. ++. +.|-+.....|+..+++.+ -..+++.+.|.|
T Consensus 105 wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~S 184 (321)
T COG3458 105 WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGS 184 (321)
T ss_pred ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccc
Confidence 567899999999999998843 111 1122333444555555544 156789999999
Q ss_pred hhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhc
Q 026718 57 YGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQL 136 (234)
Q Consensus 57 ~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (234)
.||.+++.+++..| ++++++.+-|+...... ++... ..-.-..+...+...
T Consensus 185 qGGglalaaaal~~-rik~~~~~~Pfl~df~r---------------~i~~~-------------~~~~ydei~~y~k~h 235 (321)
T COG3458 185 QGGGLALAAAALDP-RIKAVVADYPFLSDFPR---------------AIELA-------------TEGPYDEIQTYFKRH 235 (321)
T ss_pred cCchhhhhhhhcCh-hhhcccccccccccchh---------------heeec-------------ccCcHHHHHHHHHhc
Confidence 99999999988765 79999888876543211 00000 000011111222222
Q ss_pred CCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCC-CcEEEccCCCccee
Q 026718 137 SPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPP-HQVEEIKDSDHMVM 215 (234)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~ 215 (234)
.+. ..+.... +.-.........+++|+|+..|-.|.++||..+-.+.+.++. .++.+++.-+|.-
T Consensus 236 ~~~-e~~v~~T------------L~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~- 301 (321)
T COG3458 236 DPK-EAEVFET------------LSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEG- 301 (321)
T ss_pred Cch-HHHHHHH------------HhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecccccc-
Confidence 211 1111111 111111111333489999999999999999998888998874 4677777667743
Q ss_pred ecChHHHHHHHHHHhh
Q 026718 216 MSKPLELWAHLLSIAG 231 (234)
Q Consensus 216 ~~~p~~~~~~i~~fl~ 231 (234)
-|.-..+.+..|++
T Consensus 302 --~p~~~~~~~~~~l~ 315 (321)
T COG3458 302 --GPGFQSRQQVHFLK 315 (321)
T ss_pred --CcchhHHHHHHHHH
Confidence 34444444555554
No 111
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.20 E-value=2.1e-10 Score=81.35 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=67.1
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
-|.||+|.+||+|.|+.+....++....|.-+..++-.+ +.+++.+=|-.||+.|+..+|..||++|.++-+-
T Consensus 188 ~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL-g~nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 188 AFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL-GYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred eEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHh-CcceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 379999999999999998877788999999999999999 9999999999999999999999999999887543
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.20 E-value=1.7e-09 Score=82.09 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=56.8
Q ss_pred CceEEeecCC-CCCCCCCCCC-CCCchhhhhhHHHHHHHhc------CCCCceEEEeeChhHHHHHHHHHhC--------
Q 026718 6 GHNVTAFDLA-ASGVEPQQVH-NLRSISDFFKPLIDFMAAL------PLDKKVILVGHSYGGLAVAQSMERF-------- 69 (234)
Q Consensus 6 g~~vi~~D~~-G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~-------- 69 (234)
..+++.+|.| |+|.|..... ...+.++.++|+.++++.. ....+++|+|||+||.++..+|.+.
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~ 200 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGD 200 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccC
Confidence 3689999975 8998865432 2345678888888888743 1458999999999999888777653
Q ss_pred --CcccceeEEeccCC
Q 026718 70 --PNKISVAVFVSALK 83 (234)
Q Consensus 70 --p~~v~~lvl~~~~~ 83 (234)
+-.++++++-++..
T Consensus 201 ~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 201 GLYINLAGLAVGNGLT 216 (462)
T ss_pred CceeeeEEEEEecccc
Confidence 12467888877754
No 113
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.19 E-value=6.9e-10 Score=77.02 Aligned_cols=153 Identities=18% Similarity=0.119 Sum_probs=90.2
Q ss_pred chhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCc-----ccceeEEeccCCCCCCcchhhhhhhhhhh
Q 026718 29 SISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPN-----KISVAVFVSALKPGPDLNISTLNQESFSR 100 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 100 (234)
++...+..+..++..| .+.+++.+|||||||..++.|+..+.. ++.++|.++++.......... ...
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~--~~~--- 155 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDD--QNQ--- 155 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC---TTT---
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccccccc--chh---
Confidence 6777888888888776 478899999999999999999988632 589999999765432110000 000
Q ss_pred cCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEe
Q 026718 101 QGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYII 180 (234)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 180 (234)
..+ .... +.........+.... ...+ ..++.+|-|.
T Consensus 156 ---------------------~~~--------~~~g-p~~~~~~y~~l~~~~----------~~~~----p~~i~VLnI~ 191 (255)
T PF06028_consen 156 ---------------------NDL--------NKNG-PKSMTPMYQDLLKNR----------RKNF----PKNIQVLNIY 191 (255)
T ss_dssp ---------------------T-C--------STT--BSS--HHHHHHHHTH----------GGGS----TTT-EEEEEE
T ss_pred ---------------------hhh--------cccC-CcccCHHHHHHHHHH----------HhhC----CCCeEEEEEe
Confidence 000 0000 001111111111110 0000 0167899999
Q ss_pred eC------CCccccHHHHHHHHHhCCC----CcEEEcc--CCCcceeecChHHHHHHHHHHhh
Q 026718 181 SE------KDLVTEKDLAMWMIKRNPP----HQVEEIK--DSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 181 g~------~D~~~~~~~~~~~~~~~~~----~~~~~~~--~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
|. .|..+|...+..+...+.+ .+-.++. ++.|.-..|++ ++.+.|.+||-
T Consensus 192 G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 192 GDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp EESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred cccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 98 7999999988877777753 2445554 36898877776 57788998874
No 114
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.18 E-value=1.2e-09 Score=68.36 Aligned_cols=157 Identities=16% Similarity=0.142 Sum_probs=103.4
Q ss_pred CCCCCceEEeecCCCC-----CCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCccccee
Q 026718 2 IKSSGHNVTAFDLAAS-----GVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 76 (234)
|+.+|+.|..++++-. |....++....-...+...+.++...+ ...+.++-|+||||.++.+++..-...|+++
T Consensus 39 la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l-~~gpLi~GGkSmGGR~aSmvade~~A~i~~L 117 (213)
T COG3571 39 LARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGL-AEGPLIIGGKSMGGRVASMVADELQAPIDGL 117 (213)
T ss_pred HHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcc-cCCceeeccccccchHHHHHHHhhcCCcceE
Confidence 5678999999998754 322223332334566777788888877 7789999999999999999988766669999
Q ss_pred EEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccch
Q 026718 77 VFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFS 156 (234)
Q Consensus 77 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (234)
++++-+...++.+ ++.. .. .
T Consensus 118 ~clgYPfhppGKP-----e~~R-----------------------------------------------t~------H-- 137 (213)
T COG3571 118 VCLGYPFHPPGKP-----EQLR-----------------------------------------------TE------H-- 137 (213)
T ss_pred EEecCccCCCCCc-----ccch-----------------------------------------------hh------h--
Confidence 9887443322211 0000 00 0
Q ss_pred hhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecC----------hHHHHHHH
Q 026718 157 EEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSK----------PLELWAHL 226 (234)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~----------p~~~~~~i 226 (234)
+. -.++|++|.+|+.|.+-..+... -....+..++++++++.|.+--.+ -...++.|
T Consensus 138 ---L~---------gl~tPtli~qGtrD~fGtr~~Va-~y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~v 204 (213)
T COG3571 138 ---LT---------GLKTPTLITQGTRDEFGTRDEVA-GYALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQV 204 (213)
T ss_pred ---cc---------CCCCCeEEeecccccccCHHHHH-hhhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHH
Confidence 00 01789999999999987766542 223345679999999999753221 23456677
Q ss_pred HHHhhc
Q 026718 227 LSIAGN 232 (234)
Q Consensus 227 ~~fl~~ 232 (234)
..|+.+
T Consensus 205 a~~~~~ 210 (213)
T COG3571 205 AGWARR 210 (213)
T ss_pred HHHHhh
Confidence 777654
No 115
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.17 E-value=1.3e-09 Score=73.07 Aligned_cols=186 Identities=8% Similarity=0.040 Sum_probs=84.2
Q ss_pred CCCCCceEEeecCCCC-CCCCCCCCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeEE
Q 026718 2 IKSSGHNVTAFDLAAS-GVEPQQVHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVF 78 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 78 (234)
|+.+||+|+.+|...| |.|++.... +++....+++..+++.+ .+..++-|+.-|+.|.+|+..|.+. .+.-+|.
T Consensus 53 L~~NGFhViRyDsl~HvGlSsG~I~e-ftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLit 129 (294)
T PF02273_consen 53 LSANGFHVIRYDSLNHVGLSSGDINE-FTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLIT 129 (294)
T ss_dssp HHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEE
T ss_pred HhhCCeEEEeccccccccCCCCChhh-cchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEE
Confidence 5678999999999887 899887653 79988888888777776 4778899999999999999999853 3666665
Q ss_pred eccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhh
Q 026718 79 VSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEE 158 (234)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (234)
.-+..... ..+++..+. ..+..................-...+..+.+.. .+......
T Consensus 130 aVGVVnlr-----~TLe~al~~--Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~---------------~w~~l~ST 187 (294)
T PF02273_consen 130 AVGVVNLR-----DTLEKALGY--DYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEH---------------GWDDLDST 187 (294)
T ss_dssp ES--S-HH-----HHHHHHHSS---GGGS-GGG--SEEEETTEEEEHHHHHHHHHHT---------------T-SSHHHH
T ss_pred EeeeeeHH-----HHHHHHhcc--chhhcchhhCCCcccccccccchHHHHHHHHHc---------------CCccchhH
Confidence 55433211 111111110 111110000000000000000011111111111 11111000
Q ss_pred hhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCC--CCcEEEccCCCcceeecChH
Q 026718 159 DMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNP--PHQVEEIKDSDHMVMMSKPL 220 (234)
Q Consensus 159 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~ 220 (234)
... .+...+|++.+++++|.++......++...+. ..++..++|++|-+- |+|-
T Consensus 188 -~~~------~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 188 -IND------MKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp -HHH------HTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred -HHH------HhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 111 11228999999999999999988888887654 568889999999874 5553
No 116
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.17 E-value=8.5e-11 Score=87.80 Aligned_cols=80 Identities=23% Similarity=0.226 Sum_probs=59.2
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHH----HhcCCCCceEEEeeChhHHHHHHHHHhCCcc----c
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFM----AALPLDKKVILVGHSYGGLAVAQSMERFPNK----I 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~----v 73 (234)
|.+.||.+ ..|++|+|.+.+... ..+++.+++.+++ +.. +.++++|+||||||.++..++..+|+. |
T Consensus 117 L~~~GY~~-~~dL~g~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~-g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I 191 (440)
T PLN02733 117 LIKWGYKE-GKTLFGFGYDFRQSN---RLPETMDGLKKKLETVYKAS-GGKKVNIISHSMGGLLVKCFMSLHSDVFEKYV 191 (440)
T ss_pred HHHcCCcc-CCCcccCCCCccccc---cHHHHHHHHHHHHHHHHHHc-CCCCEEEEEECHhHHHHHHHHHHCCHhHHhHh
Confidence 55678755 889999999876532 2344444444444 444 678999999999999999999988864 7
Q ss_pred ceeEEeccCCCCC
Q 026718 74 SVAVFVSALKPGP 86 (234)
Q Consensus 74 ~~lvl~~~~~~~~ 86 (234)
+++|.++++....
T Consensus 192 ~~~I~la~P~~Gs 204 (440)
T PLN02733 192 NSWIAIAAPFQGA 204 (440)
T ss_pred ccEEEECCCCCCC
Confidence 8889998765443
No 117
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.14 E-value=2.8e-09 Score=73.82 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=63.9
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC---CcccceeEEeccC
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF---PNKISVAVFVSAL 82 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~---p~~v~~lvl~~~~ 82 (234)
...|+.++.||.|.-... ..+++++++...+.|.+.....+++|+|||+||.+|...|.+. .+.|..++++++.
T Consensus 26 ~~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 26 LLPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred CceeeccccCcccccccc---cCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 367899999999863322 3589999999999998887889999999999999999998764 4579999999987
Q ss_pred CC
Q 026718 83 KP 84 (234)
Q Consensus 83 ~~ 84 (234)
.+
T Consensus 103 ~~ 104 (257)
T COG3319 103 PP 104 (257)
T ss_pred CC
Confidence 76
No 118
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.09 E-value=3.4e-10 Score=89.49 Aligned_cols=67 Identities=21% Similarity=0.293 Sum_probs=53.2
Q ss_pred CCCCCceEEeecCCCCCCCCCC---------CCC-------------CCchhhhhhHHHHHHHhcC--------------
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQ---------VHN-------------LRSISDFFKPLIDFMAALP-------------- 45 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~---------~~~-------------~~~~~~~~~~l~~~l~~~~-------------- 45 (234)
|.++||+|+++|+||||.|... ... ..++++.+.|+..+...+.
T Consensus 472 La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~ 551 (792)
T TIGR03502 472 LAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINV 551 (792)
T ss_pred HHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 4567999999999999999443 110 1278899999998888773
Q ss_pred -CCCceEEEeeChhHHHHHHHHHh
Q 026718 46 -LDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 46 -~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
+..+++++||||||.++..++..
T Consensus 552 ~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 552 IDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CCCCcEEEEecCHHHHHHHHHHHh
Confidence 13589999999999999999875
No 119
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=2.9e-09 Score=85.25 Aligned_cols=176 Identities=17% Similarity=0.101 Sum_probs=108.7
Q ss_pred CCCCceEEeecCCCCCCCCCCC-------CCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCcccc
Q 026718 3 KSSGHNVTAFDLAASGVEPQQV-------HNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKIS 74 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 74 (234)
...|+.|+.+|.||-|.....- -.....+|...-+..+++.. -+.+++.++|+|+||++++..+...|+.+-
T Consensus 555 s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~f 634 (755)
T KOG2100|consen 555 SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVF 634 (755)
T ss_pred ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceE
Confidence 4679999999999988765431 12245666666666666654 256789999999999999999999986665
Q ss_pred ee-EEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccc
Q 026718 75 VA-VFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLG 153 (234)
Q Consensus 75 ~l-vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (234)
++ +.++|..... ...... .. ...............
T Consensus 635 kcgvavaPVtd~~-~yds~~-------------------------------te-----rymg~p~~~~~~y~e------- 670 (755)
T KOG2100|consen 635 KCGVAVAPVTDWL-YYDSTY-------------------------------TE-----RYMGLPSENDKGYEE------- 670 (755)
T ss_pred EEEEEecceeeee-eecccc-------------------------------cH-----hhcCCCccccchhhh-------
Confidence 55 8888865422 000000 00 000000000000000
Q ss_pred cchhhhhhhhhcccccccCCcc-EEEEeeCCCccccHHHHHHHHHhCC----CCcEEEccCCCcceeecCh-HHHHHHHH
Q 026718 154 LFSEEDMSKELKLTWERYGTVR-RVYIISEKDLVTEKDLAMWMIKRNP----PHQVEEIKDSDHMVMMSKP-LELWAHLL 227 (234)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~p-~~~~~~i~ 227 (234)
..........+.| .|+|||+.|..++.+....+.+.+. ..++.++|+.+|.+..-.. ..+...+.
T Consensus 671 ---------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~ 741 (755)
T KOG2100|consen 671 ---------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLD 741 (755)
T ss_pred ---------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHH
Confidence 0000001111334 5999999999998887666665542 3688999999999876554 55667777
Q ss_pred HHhh
Q 026718 228 SIAG 231 (234)
Q Consensus 228 ~fl~ 231 (234)
.|+.
T Consensus 742 ~~~~ 745 (755)
T KOG2100|consen 742 RFLR 745 (755)
T ss_pred HHHH
Confidence 7776
No 120
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.08 E-value=4.2e-09 Score=72.18 Aligned_cols=77 Identities=21% Similarity=0.259 Sum_probs=58.9
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh---CCcccceeEEecc
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMER---FPNKISVAVFVSA 81 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~ 81 (234)
.++.|+++|++|+|.+.... .+++++++.+...+.......+++++|||+||.++...+.+ .++.+.+++++++
T Consensus 24 ~~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 24 GRRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDT 100 (212)
T ss_pred CCccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEcc
Confidence 45899999999998765433 36777777666655544356789999999999999988876 3567899998887
Q ss_pred CCC
Q 026718 82 LKP 84 (234)
Q Consensus 82 ~~~ 84 (234)
..+
T Consensus 101 ~~~ 103 (212)
T smart00824 101 YPP 103 (212)
T ss_pred CCC
Confidence 554
No 121
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=1.6e-09 Score=82.11 Aligned_cols=183 Identities=15% Similarity=0.094 Sum_probs=111.7
Q ss_pred CCCCCCceEEeecCCCCCCCCCC-------CCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 1 MIKSSGHNVTAFDLAASGVEPQQ-------VHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 1 ~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
.|++.||-|+.+|-||.-..... ......++|.++-+.-+.++. -+.++|.+-|+|+||+++++...++|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 36789999999999997544321 112347888888888888776 266899999999999999999999998
Q ss_pred ccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCc
Q 026718 72 KISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRP 151 (234)
Q Consensus 72 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (234)
-++..|.=+|...+.... .....+.+.- ...+........+
T Consensus 751 IfrvAIAGapVT~W~~YD------------------------------------TgYTERYMg~-P~~nE~gY~agSV-- 791 (867)
T KOG2281|consen 751 IFRVAIAGAPVTDWRLYD------------------------------------TGYTERYMGY-PDNNEHGYGAGSV-- 791 (867)
T ss_pred eeeEEeccCcceeeeeec------------------------------------ccchhhhcCC-CccchhcccchhH--
Confidence 777666544433222110 0000000000 0000000000000
Q ss_pred cccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHH----hCCCCcEEEccCCCcceee-cChHHHHHHH
Q 026718 152 LGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIK----RNPPHQVEEIKDSDHMVMM-SKPLELWAHL 226 (234)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~----~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i 226 (234)
......+... ....+++||--|.-+.......+.. .-+..+++++|+-.|.+-. |.-.-....+
T Consensus 792 --------~~~Veklpde---pnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rl 860 (867)
T KOG2281|consen 792 --------AGHVEKLPDE---PNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARL 860 (867)
T ss_pred --------HHHHhhCCCC---CceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHH
Confidence 1111111111 3458999999999887765555443 3345699999999998754 3345567788
Q ss_pred HHHhhcc
Q 026718 227 LSIAGNY 233 (234)
Q Consensus 227 ~~fl~~~ 233 (234)
..|++++
T Consensus 861 l~FlQ~~ 867 (867)
T KOG2281|consen 861 LHFLQEN 867 (867)
T ss_pred HHHHhhC
Confidence 8888763
No 122
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.03 E-value=1.6e-09 Score=74.34 Aligned_cols=71 Identities=17% Similarity=0.180 Sum_probs=49.4
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc--------CCCCceEEEeeChhHHHHHHHHHhCCc----c
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL--------PLDKKVILVGHSYGGLAVAQSMERFPN----K 72 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~----~ 72 (234)
.|+.|+.+|+|=.. ..++.+..+|+.+.++.+ .+.++++++|+|.||.+++.++....+ .
T Consensus 28 ~g~~v~~~~Yrl~p--------~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~ 99 (211)
T PF07859_consen 28 RGFVVVSIDYRLAP--------EAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPK 99 (211)
T ss_dssp HTSEEEEEE---TT--------TSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCH
T ss_pred ccEEEEEeeccccc--------cccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccc
Confidence 68999999998331 134555555555555443 145799999999999999999875433 4
Q ss_pred cceeEEeccCC
Q 026718 73 ISVAVFVSALK 83 (234)
Q Consensus 73 v~~lvl~~~~~ 83 (234)
++++++++|..
T Consensus 100 ~~~~~~~~p~~ 110 (211)
T PF07859_consen 100 PKGIILISPWT 110 (211)
T ss_dssp ESEEEEESCHS
T ss_pred hhhhhcccccc
Confidence 89999999854
No 123
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.99 E-value=4.7e-10 Score=63.40 Aligned_cols=41 Identities=22% Similarity=0.396 Sum_probs=36.9
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHH
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMA 42 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 42 (234)
|+++||.|+++|+||||.|+.......+++++++|+..+++
T Consensus 39 L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 39 LAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred HHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 67899999999999999999877777799999999998874
No 124
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.98 E-value=1.5e-08 Score=74.75 Aligned_cols=83 Identities=16% Similarity=0.097 Sum_probs=63.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCC---------CCCCchhhhhh-HHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHh
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQV---------HNLRSISDFFK-PLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~---------~~~~~~~~~~~-~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
|+++||.|..-+.||.-.|.+.. .-.+++.+++. ||-+.|+.+ .+.++++.+|||.|+......+..
T Consensus 102 LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~ 181 (403)
T KOG2624|consen 102 LADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSE 181 (403)
T ss_pred HHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcc
Confidence 57889999999999987775311 12356677553 666666655 367899999999999999988887
Q ss_pred CCc---ccceeEEeccCCC
Q 026718 69 FPN---KISVAVFVSALKP 84 (234)
Q Consensus 69 ~p~---~v~~lvl~~~~~~ 84 (234)
.|+ +|+.+++++|...
T Consensus 182 ~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 182 RPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred cchhhhhhheeeeecchhh
Confidence 765 7999999999763
No 125
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.98 E-value=3.3e-08 Score=67.25 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=34.8
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
+..+|++.|+|.||+++..++..||+.+.++..+++...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 567999999999999999999999999999988876543
No 126
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.97 E-value=2.1e-08 Score=67.57 Aligned_cols=214 Identities=14% Similarity=0.135 Sum_probs=118.1
Q ss_pred ceEEeecCCCCCCCC--------CCCCCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhC--Ccccce
Q 026718 7 HNVTAFDLAASGVEP--------QQVHNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERF--PNKISV 75 (234)
Q Consensus 7 ~~vi~~D~~G~G~S~--------~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~ 75 (234)
+.++++...||-.-+ ....+.++++++++.-.++++.. +...+++++|||-|+++.+...... .-.|.+
T Consensus 60 ~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqK 139 (301)
T KOG3975|consen 60 LPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQK 139 (301)
T ss_pred cceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEE
Confidence 557788777775433 11235689999999999999876 6778999999999999999988743 235888
Q ss_pred eEEeccCCCCCCcchhh-hhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhh----cC-Cc-ccHHHHHHh
Q 026718 76 AVFVSALKPGPDLNIST-LNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQ----LS-PV-EDWALATML 148 (234)
Q Consensus 76 lvl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~-~~~~~~~~~ 148 (234)
++++=|..-....++.. .+.... .++........ .....+.+.+++..+.+ .. .+ +........
T Consensus 140 a~~LFPTIerM~eSpnG~~~t~~l----~~~~hv~~lt~-----yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l 210 (301)
T KOG3975|consen 140 AVLLFPTIERMHESPNGIRLTKVL----RYLPHVVSLTS-----YIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFL 210 (301)
T ss_pred EEEecchHHHHhcCCCceEeeeee----eeehhhhheee-----eeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHh
Confidence 88887754322222111 011110 01110000000 00122223333222111 00 01 111000000
Q ss_pred -----cCccccchhhhhhhhhcccc--cccCCccEEEEeeCCCccccHHHHHHHHHhCCCCc--EEEccCCCcceeecCh
Q 026718 149 -----MRPLGLFSEEDMSKELKLTW--ERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQ--VEEIKDSDHMVMMSKP 219 (234)
Q Consensus 149 -----~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~~~gH~~~~~~p 219 (234)
.+.......+++........ -....+-+.+.+|..|.++|.+....+.+.+|..+ +-+ ++.-|.+-....
T Consensus 211 ~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~ 289 (301)
T KOG3975|consen 211 THPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHA 289 (301)
T ss_pred hcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeeccc
Confidence 00000000000111111100 00114578999999999999999999999999654 444 779999999999
Q ss_pred HHHHHHHHHHh
Q 026718 220 LELWAHLLSIA 230 (234)
Q Consensus 220 ~~~~~~i~~fl 230 (234)
+..+..+.+.+
T Consensus 290 q~ma~~v~d~~ 300 (301)
T KOG3975|consen 290 QYMANAVFDMI 300 (301)
T ss_pred HHHHHHHHHhh
Confidence 98888887765
No 127
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.92 E-value=8.7e-09 Score=73.67 Aligned_cols=43 Identities=12% Similarity=0.008 Sum_probs=34.5
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhC-----CCCcEEEccCCCccee
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRN-----PPHQVEEIKDSDHMVM 215 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~ 215 (234)
+.|+++.+|..|.++|+...+.+.+.+ .+++++.++..+|...
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 789999999999999988766665543 3567788888999754
No 128
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.88 E-value=2.4e-09 Score=69.87 Aligned_cols=170 Identities=14% Similarity=0.054 Sum_probs=97.5
Q ss_pred CCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh-CCcccceeEEecc
Q 026718 3 KSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMER-FPNKISVAVFVSA 81 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~ 81 (234)
..+||+|..+++ |.+.....-..++.++..-+.-+++...+.+.+.+-|||.|+.+|+.+..+ +..+|.++++.++
T Consensus 94 ~~~gY~vasvgY---~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G 170 (270)
T KOG4627|consen 94 VRRGYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG 170 (270)
T ss_pred hhcCeEEEEecc---CcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhh
Confidence 467898888754 444322110123444444444445555556677888999999999887665 4568999998886
Q ss_pred CCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhh
Q 026718 82 LKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMS 161 (234)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (234)
..... .+.. ....... - ...+..+. ... . +.
T Consensus 171 vY~l~---------EL~~-------te~g~dl---------g-------------Lt~~~ae~----~Sc---d----l~ 201 (270)
T KOG4627|consen 171 VYDLR---------ELSN-------TESGNDL---------G-------------LTERNAES----VSC---D----LW 201 (270)
T ss_pred HhhHH---------HHhC-------Ccccccc---------C-------------cccchhhh----cCc---c----HH
Confidence 54311 1110 0000000 0 00000000 000 0 11
Q ss_pred hhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecCh----HHHHHHHHHHh
Q 026718 162 KELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKP----LELWAHLLSIA 230 (234)
Q Consensus 162 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p----~~~~~~i~~fl 230 (234)
.... .++|++++.|++|.---.+..+.+......+++..+++.+|+-.+++- ..+...+++|.
T Consensus 202 ~~~~------v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 202 EYTD------VTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred HhcC------ceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 1101 177999999999976666777888888888999999999999776643 33444555543
No 129
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.87 E-value=8.3e-08 Score=63.73 Aligned_cols=56 Identities=13% Similarity=0.101 Sum_probs=46.0
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
++|+|.|.|+.|.+++...+..+++.+++..+..-+ +||+++-..+ ..+.|.+|++
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~--~~~~i~~fi~ 218 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAK--YKEKIADFIQ 218 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchH--HHHHHHHHHH
Confidence 889999999999999999999999999998777777 9999986653 4444444443
No 130
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.87 E-value=1.4e-08 Score=69.52 Aligned_cols=46 Identities=22% Similarity=0.231 Sum_probs=33.5
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCC-CcEEEccCCCcceeecCh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPP-HQVEEIKDSDHMVMMSKP 219 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p 219 (234)
++|++.|+|++|.+++++..+.+.+.+.+ .+++..+ +||.++....
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 78999999999999999988989888877 7888888 9998886543
No 131
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.86 E-value=4.1e-08 Score=67.77 Aligned_cols=82 Identities=23% Similarity=0.237 Sum_probs=53.6
Q ss_pred CCCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHh-c-----CCCCceEEEeeChhHHHHHHHHHhC-----
Q 026718 1 MIKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAA-L-----PLDKKVILVGHSYGGLAVAQSMERF----- 69 (234)
Q Consensus 1 ~l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-~-----~~~~~~~lvGhS~Gg~~a~~~a~~~----- 69 (234)
++++.||-|+++|+...+..... .......+.++.+.+=++. + .+..++.|.|||-||-+|..++..+
T Consensus 39 hvAShGyIVV~~d~~~~~~~~~~-~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~ 117 (259)
T PF12740_consen 39 HVASHGYIVVAPDLYSIGGPDDT-DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL 117 (259)
T ss_pred HHHhCceEEEEecccccCCCCcc-hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhccccc
Confidence 46789999999997664331111 1112233333332221111 1 1456899999999999999999887
Q ss_pred CcccceeEEeccCC
Q 026718 70 PNKISVAVFVSALK 83 (234)
Q Consensus 70 p~~v~~lvl~~~~~ 83 (234)
+.+++++++++|.-
T Consensus 118 ~~~~~ali~lDPVd 131 (259)
T PF12740_consen 118 DLRFSALILLDPVD 131 (259)
T ss_pred ccceeEEEEecccc
Confidence 56899999999864
No 132
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.85 E-value=1.8e-07 Score=69.93 Aligned_cols=57 Identities=21% Similarity=0.318 Sum_probs=46.7
Q ss_pred CchhhhhhHHHHHHHhc----CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 28 RSISDFFKPLIDFMAAL----PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
.++.+.+....++++.+ ++..+.+|+|.|.||..++.+|+.+|+.+.-+|+.+++..
T Consensus 116 QTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 116 QTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 47888777766777665 3345899999999999999999999999999998887653
No 133
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.84 E-value=1.2e-08 Score=71.97 Aligned_cols=78 Identities=17% Similarity=0.229 Sum_probs=59.3
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+.||.|+.+++||++.|.+.+....+....-.-+.-.|+.+ -..+.+++.|+|.||..+..+|..||+ |+++|+-+++
T Consensus 266 ~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 266 QLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 56899999999999999987654333333323333445555 246789999999999999999999997 8999887764
No 134
>PRK04940 hypothetical protein; Provisional
Probab=98.83 E-value=3.4e-07 Score=59.72 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=38.3
Q ss_pred cEEEEeeCCCccccHHHHHHHHHhCCCC-cEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 175 RRVYIISEKDLVTEKDLAMWMIKRNPPH-QVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 175 P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
..+++..+.|.+.+...+. +.+.+. ++.+.+|+.|-+ ++-+.....|.+|+++
T Consensus 126 r~~vllq~gDEvLDyr~a~---~~y~~~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTA---EELHPYYEIVWDEEQTHKF--KNISPHLQRIKAFKTL 179 (180)
T ss_pred cEEEEEeCCCcccCHHHHH---HHhccCceEEEECCCCCCC--CCHHHHHHHHHHHHhc
Confidence 4689999999999876544 333444 688888777765 4556677888888753
No 135
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.81 E-value=5e-08 Score=67.11 Aligned_cols=78 Identities=21% Similarity=0.277 Sum_probs=50.6
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHh----c----CCCCceEEEeeChhHHHHHHHHHhCC---ccc
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAA----L----PLDKKVILVGHSYGGLAVAQSMERFP---NKI 73 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~----~----~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v 73 (234)
..++++++|+......-. ...+.+.++.+.+.++. . .+.+++++|||||||.+|..++...+ +.|
T Consensus 38 ~~~d~ft~df~~~~s~~~----g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v 113 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSAFH----GRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSV 113 (225)
T ss_pred cceeEEEeccCccccccc----cccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccE
Confidence 357888998876432211 12333433333333332 2 36789999999999999988876543 579
Q ss_pred ceeEEeccCCCCC
Q 026718 74 SVAVFVSALKPGP 86 (234)
Q Consensus 74 ~~lvl~~~~~~~~ 86 (234)
+.+|.++++....
T Consensus 114 ~~iitl~tPh~g~ 126 (225)
T PF07819_consen 114 KTIITLGTPHRGS 126 (225)
T ss_pred EEEEEEcCCCCCc
Confidence 9999999876544
No 136
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.72 E-value=3.4e-07 Score=69.82 Aligned_cols=83 Identities=17% Similarity=0.124 Sum_probs=65.6
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCc-hhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRS-ISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
++++||.|+..|.||.|.|++......+ -.+-..|++++|.+. -.+.+|..+|.|++|...+.+|+..|.-++.++-.
T Consensus 76 ~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~ 155 (563)
T COG2936 76 FAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPT 155 (563)
T ss_pred eecCceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccc
Confidence 5688999999999999999987654444 233344666777665 25689999999999999999999988888888877
Q ss_pred ccCCC
Q 026718 80 SALKP 84 (234)
Q Consensus 80 ~~~~~ 84 (234)
.+...
T Consensus 156 ~~~~D 160 (563)
T COG2936 156 EGLVD 160 (563)
T ss_pred ccccc
Confidence 76544
No 137
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.72 E-value=3.1e-06 Score=61.36 Aligned_cols=192 Identities=15% Similarity=0.097 Sum_probs=101.8
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHh-----cCCCCceEEEeeChhHHHHHHHHHhC------Ccc
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAA-----LPLDKKVILVGHSYGGLAVAQSMERF------PNK 72 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~-----~~~~~~~~lvGhS~Gg~~a~~~a~~~------p~~ 72 (234)
+.+.-|+.+|+|=--+..-| ..++|-.+.+.-+.++ -.+.++++|+|-|.||.+|..+|.+. +.+
T Consensus 121 ~~~~vvvSVdYRLAPEh~~P----a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~k 196 (336)
T KOG1515|consen 121 ELNCVVVSVDYRLAPEHPFP----AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPK 196 (336)
T ss_pred HcCeEEEecCcccCCCCCCC----ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcc
Confidence 34667888998743322222 2445544444444442 24678899999999999999887653 357
Q ss_pred cceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCcc
Q 026718 73 ISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPL 152 (234)
Q Consensus 73 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (234)
+++.|++-|................... ......... .+.. ..-+.
T Consensus 197 i~g~ili~P~~~~~~~~~~e~~~~~~~~---------------------~~~~~~~~~-~~w~------------~~lP~ 242 (336)
T KOG1515|consen 197 IKGQILIYPFFQGTDRTESEKQQNLNGS---------------------PELARPKID-KWWR------------LLLPN 242 (336)
T ss_pred eEEEEEEecccCCCCCCCHHHHHhhcCC---------------------cchhHHHHH-HHHH------------HhCCC
Confidence 8999999987654422211111001000 000000000 0000 00000
Q ss_pred cc-chhhhhhhhhc-cc--ccccCCc-cEEEEeeCCCccccHH--HHHHHHHhCCCCcEEEccCCCcceeecCh-----H
Q 026718 153 GL-FSEEDMSKELK-LT--WERYGTV-RRVYIISEKDLVTEKD--LAMWMIKRNPPHQVEEIKDSDHMVMMSKP-----L 220 (234)
Q Consensus 153 ~~-~~~~~~~~~~~-~~--~~~~~~~-P~l~i~g~~D~~~~~~--~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-----~ 220 (234)
.. .....+-.... .. ......+ |++++.++.|.+.... ..+++.+.--.+++.+++++.|.++.-.| .
T Consensus 243 ~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~ 322 (336)
T KOG1515|consen 243 GKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAH 322 (336)
T ss_pred CCCCcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHH
Confidence 00 00000000000 00 0111134 6999999999887543 45555554445677789999999887555 3
Q ss_pred HHHHHHHHHhhcc
Q 026718 221 ELWAHLLSIAGNY 233 (234)
Q Consensus 221 ~~~~~i~~fl~~~ 233 (234)
++.+.|.+|+.++
T Consensus 323 ~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 323 ALMDAIVEFIKSN 335 (336)
T ss_pred HHHHHHHHHHhhc
Confidence 5677888888754
No 138
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.69 E-value=8.4e-07 Score=64.71 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=50.7
Q ss_pred CCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHh---c-CCCCceEEEeeChhHHHHHHHHHhCCc----ccc
Q 026718 3 KSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAA---L-PLDKKVILVGHSYGGLAVAQSMERFPN----KIS 74 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~---~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~ 74 (234)
...|+.|+.+|+|---+-..+ ..+++..+-+.-+.++ + .+.+++.++|+|.||.+++.++..-.+ ...
T Consensus 107 ~~~g~~vv~vdYrlaPe~~~p----~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~ 182 (312)
T COG0657 107 AAAGAVVVSVDYRLAPEHPFP----AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPA 182 (312)
T ss_pred HHcCCEEEecCCCCCCCCCCC----chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCce
Confidence 457999999999844322111 2334422222222222 2 136789999999999999998876543 467
Q ss_pred eeEEeccCCCCC
Q 026718 75 VAVFVSALKPGP 86 (234)
Q Consensus 75 ~lvl~~~~~~~~ 86 (234)
..+++.|.....
T Consensus 183 ~~~li~P~~d~~ 194 (312)
T COG0657 183 AQVLISPLLDLT 194 (312)
T ss_pred EEEEEecccCCc
Confidence 888888865433
No 139
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.68 E-value=1.6e-07 Score=64.05 Aligned_cols=56 Identities=9% Similarity=0.060 Sum_probs=49.4
Q ss_pred EEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcc-eeecChHHHHHHHHHHhhc
Q 026718 176 RVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHM-VMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 176 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~-~~~~~p~~~~~~i~~fl~~ 232 (234)
++++.+++|..+|......+.+.+|++++..++ +||. .++-+.+.+.+.|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 577889999999999899999999999999999 8996 5567889999999887764
No 140
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.67 E-value=1.6e-06 Score=65.91 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=54.1
Q ss_pred CceEEeecCC-CCCCCCCCCC--CCCchhhhhhHHHHHHHhc------CCCCceEEEeeChhHHHHHHHHHh----C---
Q 026718 6 GHNVTAFDLA-ASGVEPQQVH--NLRSISDFFKPLIDFMAAL------PLDKKVILVGHSYGGLAVAQSMER----F--- 69 (234)
Q Consensus 6 g~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~----~--- 69 (234)
..+++-+|.| |.|.|..... ...+.++.++++.++|+.. ....+++|.|-|+||..+-.+|.. .
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~ 164 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKG 164 (415)
T ss_dssp TSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC-
T ss_pred ccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccc
Confidence 3689999966 9999976443 2357788888888887754 145699999999999876665542 2
Q ss_pred ---CcccceeEEeccCCC
Q 026718 70 ---PNKISVAVFVSALKP 84 (234)
Q Consensus 70 ---p~~v~~lvl~~~~~~ 84 (234)
+-.++++++.++...
T Consensus 165 ~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 165 DQPKINLKGIAIGNGWID 182 (415)
T ss_dssp -STTSEEEEEEEESE-SB
T ss_pred cccccccccceecCcccc
Confidence 234789998887653
No 141
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.67 E-value=1.5e-07 Score=56.31 Aligned_cols=60 Identities=15% Similarity=0.015 Sum_probs=53.7
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
..|+|++.++.|+..|.+..+.+++.+++++++.+++.||..+.....-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 479999999999999999999999999999999999999999875556678888888863
No 142
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.61 E-value=1.4e-07 Score=68.38 Aligned_cols=79 Identities=16% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC----CCCchhhhhh---------------HHHHHHHhc---C--CCCceEEEeeCh
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH----NLRSISDFFK---------------PLIDFMAAL---P--LDKKVILVGHSY 57 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~---------------~l~~~l~~~---~--~~~~~~lvGhS~ 57 (234)
|+++||-|+++|.+|+|+...... ..++...++. |....++.+ + +.++|.++|+||
T Consensus 156 LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSm 235 (390)
T PF12715_consen 156 LAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSM 235 (390)
T ss_dssp HHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGG
T ss_pred HHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecc
Confidence 678999999999999998765332 1112222211 233344444 1 457899999999
Q ss_pred hHHHHHHHHHhCCcccceeEEecc
Q 026718 58 GGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 58 Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
||..++.+++.. ++|+..|..+-
T Consensus 236 Gg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 236 GGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp GHHHHHHHHHH--TT--EEEEES-
T ss_pred cHHHHHHHHHcc-hhhHhHhhhhh
Confidence 999999999875 68888877664
No 143
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.59 E-value=1e-06 Score=60.32 Aligned_cols=82 Identities=22% Similarity=0.195 Sum_probs=52.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc------CCCCceEEEeeChhHHHHHHHHHhCC--ccc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL------PLDKKVILVGHSYGGLAVAQSMERFP--NKI 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v 73 (234)
+++.||-|+++++-.-- ......+..+....++.+..-++++ .+..++.++|||.||-.|..+|..+. -.+
T Consensus 69 IASHGfIVVAPQl~~~~-~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkf 147 (307)
T PF07224_consen 69 IASHGFIVVAPQLYTLF-PPDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKF 147 (307)
T ss_pred HhhcCeEEEechhhccc-CCCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCch
Confidence 57889999999986431 1101111112233333333333333 25678999999999999999998774 347
Q ss_pred ceeEEeccCCC
Q 026718 74 SVAVFVSALKP 84 (234)
Q Consensus 74 ~~lvl~~~~~~ 84 (234)
.++|.++|...
T Consensus 148 saLIGiDPV~G 158 (307)
T PF07224_consen 148 SALIGIDPVAG 158 (307)
T ss_pred hheecccccCC
Confidence 88888887643
No 144
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.53 E-value=6e-06 Score=62.15 Aligned_cols=52 Identities=19% Similarity=0.319 Sum_probs=42.3
Q ss_pred hhhhHHHHHHHhc----CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 32 DFFKPLIDFMAAL----PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 32 ~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++++|.-+|++. .+.++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3456666666654 245678999999999999999999999999999999753
No 145
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.53 E-value=1.8e-06 Score=63.13 Aligned_cols=149 Identities=11% Similarity=0.089 Sum_probs=88.6
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCCcccccccccCCCCCCCCccccc
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGPLLDCKYAYDDGPDSPPTTFIFG 125 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (234)
..+++++.|.|==|..++..|+ ...||.+++-+.-.............+.+.. .| ....
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~---~w-----------------s~a~ 228 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGG---NW-----------------SFAF 228 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCC---CC-----------------ccch
Confidence 5789999999999999999988 5678888875543222111111111111110 11 0111
Q ss_pred chhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCCCccccHHHHHHHHHhCCC-CcE
Q 026718 126 PLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEKDLVTEKDLAMWMIKRNPP-HQV 204 (234)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 204 (234)
..+....+...........+.....+... . .++ ++|.++|.|..|....+.....+...+|+ ..+
T Consensus 229 ~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y--------~-----~rL-~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~l 294 (367)
T PF10142_consen 229 QDYYNEGITQQLDTPEFDKLMQIVDPYSY--------R-----DRL-TMPKYIINATGDEFFVPDSSNFYYDKLPGEKYL 294 (367)
T ss_pred hhhhHhCchhhcCCHHHHHHHHhcCHHHH--------H-----Hhc-CccEEEEecCCCceeccCchHHHHhhCCCCeeE
Confidence 11122222222222222333333333211 1 111 88999999999999999999999999885 567
Q ss_pred EEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 205 EEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 205 ~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
..+||++|..-. ..+.+.|..|+..
T Consensus 295 r~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 295 RYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred EeCCCCCcccch---HHHHHHHHHHHHH
Confidence 889999998866 5566667777653
No 146
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.49 E-value=1.5e-06 Score=57.82 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=56.5
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCC---CCceEEEeeChhHHHHHHHHH--hCCccccee
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPL---DKKVILVGHSYGGLAVAQSME--RFPNKISVA 76 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~lvGhS~Gg~~a~~~a~--~~p~~v~~l 76 (234)
|.+.+|.++-+-++.+ ..--...++++-++|+..+++++.. ...++|+|||.|+.=.+.|.. ..|..+...
T Consensus 62 lde~~wslVq~q~~Ss----y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraa 137 (299)
T KOG4840|consen 62 LDENSWSLVQPQLRSS----YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAA 137 (299)
T ss_pred Hhhccceeeeeecccc----ccccccccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHH
Confidence 4566788888877532 1111235899999999999998733 348999999999997777663 236678888
Q ss_pred EEeccCCC
Q 026718 77 VFVSALKP 84 (234)
Q Consensus 77 vl~~~~~~ 84 (234)
|+.+|...
T Consensus 138 IlqApVSD 145 (299)
T KOG4840|consen 138 ILQAPVSD 145 (299)
T ss_pred HHhCccch
Confidence 88887654
No 147
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.46 E-value=7.2e-07 Score=63.46 Aligned_cols=61 Identities=30% Similarity=0.392 Sum_probs=49.1
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC------CCCceEEEeeChhHHHHHHHHHhC
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP------LDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
.|-+|+.+++||.|.|.+.. +.++++.|-.+.++.+. +.+.+++.|||+||.++.+++.++
T Consensus 170 ~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 170 LGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 46799999999999998765 35788888777777661 337899999999999999876665
No 148
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.45 E-value=1.6e-06 Score=57.32 Aligned_cols=126 Identities=10% Similarity=0.027 Sum_probs=84.0
Q ss_pred CchhhhhhHHHHHHHhc----CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcchhhhhhhhhhhcCC
Q 026718 28 RSISDFFKPLIDFMAAL----PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNISTLNQESFSRQGP 103 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (234)
.++...++.+..++++. -...++.+-|.|+||.+++..+..+|..+.+++-..+..+..... +. .
T Consensus 69 ~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~-------~~----~ 137 (206)
T KOG2112|consen 69 EGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG-------LP----G 137 (206)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh-------cc----C
Confidence 45666777777777765 134678999999999999999999988888887776654411100 00 0
Q ss_pred cccccccccCCCCCCCCcccccchhHHHHHhhcCCcccHHHHHHhcCccccchhhhhhhhhcccccccCCccEEEEeeCC
Q 026718 104 LLDCKYAYDDGPDSPPTTFIFGPLYLKSTVYQLSPVEDWALATMLMRPLGLFSEEDMSKELKLTWERYGTVRRVYIISEK 183 (234)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 183 (234)
+. ..+...|++..||+.
T Consensus 138 ~~---------------------------------------------------------------~~~~~~~i~~~Hg~~ 154 (206)
T KOG2112|consen 138 WL---------------------------------------------------------------PGVNYTPILLCHGTA 154 (206)
T ss_pred Cc---------------------------------------------------------------cccCcchhheecccC
Confidence 00 000035899999999
Q ss_pred CccccHHHHHHHHHhC----CCCcEEEccCCCcceeecChHHHHHHHH
Q 026718 184 DLVTEKDLAMWMIKRN----PPHQVEEIKDSDHMVMMSKPLELWAHLL 227 (234)
Q Consensus 184 D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~p~~~~~~i~ 227 (234)
|+++|....+...+.+ ...+++.+++.+|...-+.-+++...|.
T Consensus 155 d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 155 DPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred CceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 9999987555444333 3468899999999876555444444443
No 149
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.42 E-value=1.3e-07 Score=68.69 Aligned_cols=82 Identities=17% Similarity=0.168 Sum_probs=50.6
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc-----CCCCceEEEeeChhHHHHHHHHHhCCc--ccceeE
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL-----PLDKKVILVGHSYGGLAVAQSMERFPN--KISVAV 77 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lv 77 (234)
.+++||++|+..--...... .........+.+..+|..| -..++++|||||+||.+|-.++..... ++.+++
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~-a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rIt 181 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ-AVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRIT 181 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH-HHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEE
T ss_pred CCceEEEEcchhhccccccc-hhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEE
Confidence 57999999995322111000 0112333444444545443 156899999999999999999998877 899999
Q ss_pred EeccCCCCCC
Q 026718 78 FVSALKPGPD 87 (234)
Q Consensus 78 l~~~~~~~~~ 87 (234)
.++|+.|...
T Consensus 182 gLDPAgP~F~ 191 (331)
T PF00151_consen 182 GLDPAGPLFE 191 (331)
T ss_dssp EES-B-TTTT
T ss_pred ecCccccccc
Confidence 9999877543
No 150
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.42 E-value=1.8e-07 Score=67.26 Aligned_cols=51 Identities=10% Similarity=-0.046 Sum_probs=40.1
Q ss_pred CCccEEEEeeCCCccccHHH-HHHHHHhCCCC--cEEEccCCCcceeecChHHH
Q 026718 172 GTVRRVYIISEKDLVTEKDL-AMWMIKRNPPH--QVEEIKDSDHMVMMSKPLEL 222 (234)
Q Consensus 172 ~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~~--~~~~~~~~gH~~~~~~p~~~ 222 (234)
.++|++++.|..|...|+.. .......+++. -+..++++.|+-+++-.++.
T Consensus 250 v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 250 VTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 37899999999999877653 55556667765 67889999999999877664
No 151
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.38 E-value=1.9e-05 Score=55.43 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=48.1
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCC----CCcEEEccCCCcceee-cChHHHHHHHHHHh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNP----PHQVEEIKDSDHMVMM-SKPLELWAHLLSIA 230 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl 230 (234)
.+|-++++++.|.+++.+..++.++... .++...++++.|..|+ ++|++..+.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 6799999999999999987776665432 3677888999999887 58999999999884
No 152
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.36 E-value=4.1e-06 Score=63.90 Aligned_cols=45 Identities=11% Similarity=0.188 Sum_probs=40.2
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCC-CCcEEEccCCCcceeec
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNP-PHQVEEIKDSDHMVMMS 217 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~ 217 (234)
+.|+||+.|.+|..++++..+.+.++.. ..+++++.+++|.+-.-
T Consensus 304 k~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 304 KQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIP 349 (784)
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCC
Confidence 7799999999999999999999998876 56899999999987654
No 153
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.35 E-value=6.5e-06 Score=55.52 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=29.4
Q ss_pred EEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceee
Q 026718 177 VYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMM 216 (234)
Q Consensus 177 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 216 (234)
..+.|++|.++|++.++..-+.. ..+..++ ++|+++.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~--~~~~~~~-~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR--CTIVEID-APHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc--CcEEEec-CCCcCch
Confidence 47899999999999887776643 3577776 9999874
No 154
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.31 E-value=3.2e-06 Score=58.66 Aligned_cols=77 Identities=16% Similarity=0.191 Sum_probs=52.1
Q ss_pred eEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhC----C-----cccce
Q 026718 8 NVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERF----P-----NKISV 75 (234)
Q Consensus 8 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~----p-----~~v~~ 75 (234)
.++.+.||+.|.-..-.....+...-...+.++|..+ .+.++|++++||||+.+.+...... + .++..
T Consensus 50 ~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~ 129 (233)
T PF05990_consen 50 VVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDN 129 (233)
T ss_pred eEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhhe
Confidence 7999999988863221111123444455566666665 2678999999999999988875532 1 35788
Q ss_pred eEEeccCCC
Q 026718 76 AVFVSALKP 84 (234)
Q Consensus 76 lvl~~~~~~ 84 (234)
+++++|-.+
T Consensus 130 viL~ApDid 138 (233)
T PF05990_consen 130 VILAAPDID 138 (233)
T ss_pred EEEECCCCC
Confidence 888887544
No 155
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.30 E-value=4.2e-06 Score=63.92 Aligned_cols=79 Identities=22% Similarity=0.181 Sum_probs=56.3
Q ss_pred CceEEeecCCCCCCCCCCCC------CCCchhhhhhHHHHHHHhcC------CCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 6 GHNVTAFDLAASGVEPQQVH------NLRSISDFFKPLIDFMAALP------LDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
|=-|+++.+|-+|.|..... ...+.++..+|+..+++++. ...|++++|-|+||++|..+-.+||+.|
T Consensus 59 ~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~ 138 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLF 138 (434)
T ss_dssp TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-
T ss_pred CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCee
Confidence 44689999999999974321 23578888889988888761 3458999999999999999999999999
Q ss_pred ceeEEeccCCC
Q 026718 74 SVAVFVSALKP 84 (234)
Q Consensus 74 ~~lvl~~~~~~ 84 (234)
.+.+.-+++..
T Consensus 139 ~ga~ASSapv~ 149 (434)
T PF05577_consen 139 DGAWASSAPVQ 149 (434)
T ss_dssp SEEEEET--CC
T ss_pred EEEEeccceee
Confidence 99998877653
No 156
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.18 E-value=8.2e-05 Score=50.93 Aligned_cols=56 Identities=29% Similarity=0.171 Sum_probs=43.3
Q ss_pred chhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCc-----ccceeEEeccCCC
Q 026718 29 SISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPN-----KISVAVFVSALKP 84 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~ 84 (234)
+..++...+..++..| .+..++.+|||||||.-...|+..+.. .++++|.++++..
T Consensus 114 s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 114 SGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred chhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 5566677777776665 478999999999999999999887642 4888998887544
No 157
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.15 E-value=6.5e-06 Score=61.68 Aligned_cols=57 Identities=25% Similarity=0.413 Sum_probs=43.8
Q ss_pred hhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCc------ccceeEEeccCCCCC
Q 026718 30 ISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPN------KISVAVFVSALKPGP 86 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~lvl~~~~~~~~ 86 (234)
.+++...+...|+.. ...++++||||||||.++..+....+. .|+++|.++++....
T Consensus 99 ~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 99 RDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 335566666666654 247899999999999999999888743 599999999876544
No 158
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.11 E-value=1.3e-05 Score=51.96 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=37.8
Q ss_pred hhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCc----ccceeEEeccCCCC
Q 026718 32 DFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPN----KISVAVFVSALKPG 85 (234)
Q Consensus 32 ~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~~~ 85 (234)
.....+...++.. .+..+++++|||+||.+|..++..... .+..++..+++...
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 3444444444443 167899999999999999999887754 56677777766543
No 159
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.05 E-value=9.3e-06 Score=57.37 Aligned_cols=53 Identities=21% Similarity=0.264 Sum_probs=42.3
Q ss_pred hhhhHHHHHHHhcCCC--CceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 32 DFFKPLIDFMAALPLD--KKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 32 ~~~~~l~~~l~~~~~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
.+.++|..+|+..... ++..++|+||||..|+.++.++|+.+.+++.++|...
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 3556777777764222 2279999999999999999999999999999997643
No 160
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.04 E-value=8.6e-06 Score=60.66 Aligned_cols=35 Identities=20% Similarity=0.490 Sum_probs=25.8
Q ss_pred CceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 48 KKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++.++|||+||..++..+.+. .+++..|++++..
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 4689999999999999887765 6899999999864
No 161
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.01 E-value=0.00014 Score=56.54 Aligned_cols=84 Identities=11% Similarity=0.186 Sum_probs=62.3
Q ss_pred CCCCCceEEeecCCCCCCCCCC-------CCCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQ-------VHNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
|.++||---..--||=|.-... .....++.|+++-...+++.- ...+.++++|-|.||+++-..+...|+.+
T Consensus 473 LlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf 552 (682)
T COG1770 473 LLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLF 552 (682)
T ss_pred eecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhh
Confidence 4566665555556665543321 123358888888888888764 35568999999999999999999999999
Q ss_pred ceeEEeccCCCC
Q 026718 74 SVAVFVSALKPG 85 (234)
Q Consensus 74 ~~lvl~~~~~~~ 85 (234)
+++|+-.|+...
T Consensus 553 ~~iiA~VPFVDv 564 (682)
T COG1770 553 AGIIAQVPFVDV 564 (682)
T ss_pred hheeecCCccch
Confidence 999998887653
No 162
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.95 E-value=4.5e-06 Score=60.31 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=47.6
Q ss_pred ccEEEEeeCCCccccHHHHHHHHHhCCC--CcEEEccCCCcceeecChH---HHHHHHHHHhhcc
Q 026718 174 VRRVYIISEKDLVTEKDLAMWMIKRNPP--HQVEEIKDSDHMVMMSKPL---ELWAHLLSIAGNY 233 (234)
Q Consensus 174 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~p~---~~~~~i~~fl~~~ 233 (234)
+|+++++|.+|..+|......+.+.... .+...+++++|......+. +..+.+.+|+.++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 7999999999999999988888777655 5777888899998865443 5667777777653
No 163
>COG3150 Predicted esterase [General function prediction only]
Probab=97.95 E-value=0.00053 Score=44.00 Aligned_cols=53 Identities=21% Similarity=0.154 Sum_probs=43.2
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
.+....++.+..++... +.+...|||.|+||+.|..++.++. ++. |+++|...
T Consensus 40 h~p~~a~~ele~~i~~~-~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 40 HDPQQALKELEKAVQEL-GDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred CCHHHHHHHHHHHHHHc-CCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 47888899999999998 7677999999999999999999875 443 45676654
No 164
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.93 E-value=2.9e-05 Score=57.07 Aligned_cols=73 Identities=26% Similarity=0.335 Sum_probs=50.4
Q ss_pred EEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCC--cccceeEEeccCCCC
Q 026718 9 VTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFP--NKISVAVFVSALKPG 85 (234)
Q Consensus 9 vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~ 85 (234)
++++++++- ....+. ...-+.+..-+.+++... +.+++.++||||||.++..++..++ .+|+.++.++++...
T Consensus 92 ~~~~~~~~~-~~~~~~--~~~~~ql~~~V~~~l~~~-ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 92 VYAFELSGG-DGTYSL--AVRGEQLFAYVDEVLAKT-GAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccccccccc-CCCccc--cccHHHHHHHHHHHHhhc-CCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 566666544 111111 123444445555555555 7799999999999999999998888 899999999986543
No 165
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.92 E-value=5.8e-06 Score=56.37 Aligned_cols=76 Identities=24% Similarity=0.252 Sum_probs=37.7
Q ss_pred CCCCCce---EEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCcccce
Q 026718 2 IKSSGHN---VTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNKISV 75 (234)
Q Consensus 2 l~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 75 (234)
|.++||. |+++++-....+..... .....+.+..+.++|+.+ .+. +|.||||||||.++-.+.... .-+++
T Consensus 25 l~~~GY~~~~vya~tyg~~~~~~~~~~-~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~~~d~ 101 (219)
T PF01674_consen 25 LKAAGYCDSEVYALTYGSGNGSPSVQN-AHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-GGADK 101 (219)
T ss_dssp HHHTT--CCCEEEE--S-CCHHTHHHH-HHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-TGGGT
T ss_pred HHHcCCCcceeEeccCCCCCCCCcccc-cccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-CCCCc
Confidence 5678888 79999844433221111 011222334444444443 166 999999999999999887644 33344
Q ss_pred eEEec
Q 026718 76 AVFVS 80 (234)
Q Consensus 76 lvl~~ 80 (234)
.+-+.
T Consensus 102 ~~~lg 106 (219)
T PF01674_consen 102 VVNLG 106 (219)
T ss_dssp EEE--
T ss_pred ccCcc
Confidence 44343
No 166
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.92 E-value=8.7e-05 Score=52.07 Aligned_cols=37 Identities=24% Similarity=0.400 Sum_probs=33.9
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+..+++++|.|+||+-++.++.++|+.+++.+++++.
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 4568999999999999999999999999999999864
No 167
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.90 E-value=4e-05 Score=48.92 Aligned_cols=37 Identities=19% Similarity=0.444 Sum_probs=28.8
Q ss_pred hhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 32 DFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 32 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
...+.+.++++.. ...++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~-~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKY-PDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-cCccchhhccchHHHHHHHHHHhh
Confidence 4555666666666 568999999999999999888754
No 168
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.79 E-value=8.6e-05 Score=58.77 Aligned_cols=75 Identities=19% Similarity=0.238 Sum_probs=45.9
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc----CC--------CCceEEEeeChhHHHHHHHHHh---CC
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL----PL--------DKKVILVGHSYGGLAVAQSMER---FP 70 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~----~~--------~~~~~lvGhS~Gg~~a~~~a~~---~p 70 (234)
.|+.+++|+-+ +...-+..++.+.++-+.+.|+.+ ++ .+.|+++||||||.+|...+.. .+
T Consensus 132 ~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~ 207 (973)
T KOG3724|consen 132 SFDFFAVDFNE----EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQ 207 (973)
T ss_pred ccceEEEcccc----hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhcc
Confidence 45666777632 111112246777776666666543 12 3459999999999999887642 24
Q ss_pred cccceeEEeccCCC
Q 026718 71 NKISVAVFVSALKP 84 (234)
Q Consensus 71 ~~v~~lvl~~~~~~ 84 (234)
+.|.-++..+++..
T Consensus 208 ~sVntIITlssPH~ 221 (973)
T KOG3724|consen 208 GSVNTIITLSSPHA 221 (973)
T ss_pred chhhhhhhhcCccc
Confidence 55666777766543
No 169
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.78 E-value=6.3e-05 Score=52.17 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=41.2
Q ss_pred hHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCC
Q 026718 35 KPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGP 86 (234)
Q Consensus 35 ~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 86 (234)
+.+.-+|++- .+.++-.++|||+||.+++.....+|+.+...++++|...+.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 3444555542 245678999999999999999999999999999999875544
No 170
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.77 E-value=0.00013 Score=52.73 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=49.1
Q ss_pred ceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhC--------Ccccce
Q 026718 7 HNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERF--------PNKISV 75 (234)
Q Consensus 7 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~--------p~~v~~ 75 (234)
...+.+.||..|.--.-..+..+...-..+++.+|+.+ ...++++|++||||.+++++...+. +.+++-
T Consensus 147 ~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~n 226 (377)
T COG4782 147 GVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKN 226 (377)
T ss_pred cceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhh
Confidence 45678888877653221111123333444555666555 2578999999999999999876532 345777
Q ss_pred eEEeccCC
Q 026718 76 AVFVSALK 83 (234)
Q Consensus 76 lvl~~~~~ 83 (234)
+|+.+|-.
T Consensus 227 ViLAaPDi 234 (377)
T COG4782 227 VILAAPDI 234 (377)
T ss_pred eEeeCCCC
Confidence 78777643
No 171
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.70 E-value=0.0025 Score=44.94 Aligned_cols=76 Identities=13% Similarity=0.130 Sum_probs=50.7
Q ss_pred ceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHH-----HHHHHHHhCCcccceeEEecc
Q 026718 7 HNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGL-----AVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 7 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~-----~a~~~a~~~p~~v~~lvl~~~ 81 (234)
..|+.-|+-.--.-+...+ .++++|+++-+.+.+..+ +.+ +++++.|.-+. ++++.+...|..-.+++++++
T Consensus 131 ~~vyitDW~dAr~Vp~~~G-~FdldDYIdyvie~~~~~-Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGg 207 (415)
T COG4553 131 HDVYITDWVDARMVPLEAG-HFDLDDYIDYVIEMINFL-GPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGG 207 (415)
T ss_pred cceeEeeccccceeecccC-CccHHHHHHHHHHHHHHh-CCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecC
Confidence 3566666643322222233 479999999999999999 433 77777776654 344444456777889999998
Q ss_pred CCCC
Q 026718 82 LKPG 85 (234)
Q Consensus 82 ~~~~ 85 (234)
+...
T Consensus 208 PIDa 211 (415)
T COG4553 208 PIDA 211 (415)
T ss_pred cccc
Confidence 7643
No 172
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.66 E-value=0.00024 Score=48.95 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCceEEEeeChhHHHHHHHHHhC----CcccceeEEeccCCC
Q 026718 47 DKKVILVGHSYGGLAVAQSMERF----PNKISVAVFVSALKP 84 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~~~ 84 (234)
.+++++.|||.||.+|..++... .++|.++...+++..
T Consensus 83 ~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 34699999999999999998874 357888888887543
No 173
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.61 E-value=0.00014 Score=50.67 Aligned_cols=24 Identities=33% Similarity=0.469 Sum_probs=20.7
Q ss_pred CCCceEEEeeChhHHHHHHHHHhC
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 567899999999999999887753
No 174
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.59 E-value=0.00011 Score=56.71 Aligned_cols=55 Identities=22% Similarity=0.219 Sum_probs=38.6
Q ss_pred hhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCC---------------cccceeEEeccCCCC
Q 026718 31 SDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFP---------------NKISVAVFVSALKPG 85 (234)
Q Consensus 31 ~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p---------------~~v~~lvl~~~~~~~ 85 (234)
+++-..+..+|+.. .+.++++|+||||||.+++.+..... ..|++.|.++++...
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 44445555555543 35689999999999999999876321 247889999886544
No 175
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.56 E-value=0.00038 Score=45.88 Aligned_cols=55 Identities=24% Similarity=0.288 Sum_probs=43.1
Q ss_pred hhhhhhHHHHHHHhcC----CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 30 ISDFFKPLIDFMAALP----LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
-+.-+.+|..+++.+. ...++.++|||+|+.++-..+...+..+..+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 4556667777777762 455899999999999998888776778999999987643
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.55 E-value=0.00021 Score=52.55 Aligned_cols=77 Identities=18% Similarity=0.151 Sum_probs=57.2
Q ss_pred CceEEeecCCCCCCCCCCCC---------CCCchhhhhhHHHHHHHhcC-----CCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 6 GHNVTAFDLAASGVEPQQVH---------NLRSISDFFKPLIDFMAALP-----LDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~---------~~~~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
+--+|-..+|-+|+|..--. ...+.++-..|.+.+|..++ ...+|+.+|-|+||+++..+-.+||.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 34577889999999864211 11355666677777777762 34689999999999999999999999
Q ss_pred ccceeEEeccC
Q 026718 72 KISVAVFVSAL 82 (234)
Q Consensus 72 ~v~~lvl~~~~ 82 (234)
.|.|...-+.+
T Consensus 191 iv~GAlAaSAP 201 (492)
T KOG2183|consen 191 IVLGALAASAP 201 (492)
T ss_pred hhhhhhhccCc
Confidence 98887665544
No 177
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.54 E-value=0.0089 Score=44.32 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=50.5
Q ss_pred ceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC--C---cccceeEEecc
Q 026718 7 HNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF--P---NKISVAVFVSA 81 (234)
Q Consensus 7 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p---~~v~~lvl~~~ 81 (234)
..++++|+.-...-........-+.+.++-...+++.. +.++++|+|-|.||.+++.+.... + ..-+++|+++|
T Consensus 155 ~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~-G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 155 VSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE-GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred CeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 36777777543200111112235566666666666555 789999999999999998876532 1 12478999998
Q ss_pred CCCCC
Q 026718 82 LKPGP 86 (234)
Q Consensus 82 ~~~~~ 86 (234)
.....
T Consensus 234 Wv~l~ 238 (374)
T PF10340_consen 234 WVNLV 238 (374)
T ss_pred CcCCc
Confidence 76543
No 178
>PLN02606 palmitoyl-protein thioesterase
Probab=97.53 E-value=0.0017 Score=46.38 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=41.0
Q ss_pred chhhhhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhCCc--ccceeEEeccCC
Q 026718 29 SISDFFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERFPN--KISVAVFVSALK 83 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 83 (234)
.+.+.++.+-+-+...+ -.+-++++|+|.||.++-.++.+.|+ .|+.+|.++++.
T Consensus 75 ~~~~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 75 PLRQQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred CHHHHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 45555555555554431 12459999999999999999999987 599999998754
No 179
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.49 E-value=0.00033 Score=47.15 Aligned_cols=41 Identities=22% Similarity=0.315 Sum_probs=33.1
Q ss_pred chhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 29 SISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
...|..+....+|++.++.++++|+|||.|+.++.++...+
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 45566666677777776678999999999999999998765
No 180
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.47 E-value=0.0003 Score=48.49 Aligned_cols=39 Identities=21% Similarity=0.380 Sum_probs=24.5
Q ss_pred chhhhhhH----HHHHHHhcCC-CCceEEEeeChhHHHHHHHHH
Q 026718 29 SISDFFKP----LIDFMAALPL-DKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 29 ~~~~~~~~----l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
+++..++. |.+.++.... ..++.+|||||||.++-.+..
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 45544444 4444443322 258999999999998866544
No 181
>PLN02162 triacylglycerol lipase
Probab=97.45 E-value=0.00047 Score=51.94 Aligned_cols=34 Identities=35% Similarity=0.304 Sum_probs=25.5
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHH
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
..+.+.+++.+. ...++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~-p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARN-KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhC-CCceEEEEecChHHHHHHHHHH
Confidence 334455555555 6678999999999999998765
No 182
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.44 E-value=0.0022 Score=50.08 Aligned_cols=83 Identities=16% Similarity=0.195 Sum_probs=61.5
Q ss_pred CCCCCceEEeecCCCCCCCCC---CCC----CCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQ---QVH----NLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~---~~~----~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
|..+|+-....|.||=|.-.. ..+ ...+++|+..-+.-+++.- ...++..+.|.|-||.++..++.++|+.+
T Consensus 495 lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF 574 (712)
T KOG2237|consen 495 LLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLF 574 (712)
T ss_pred EEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHh
Confidence 345777777789998764432 222 2347777777777777653 35678999999999999999999999999
Q ss_pred ceeEEeccCCC
Q 026718 74 SVAVFVSALKP 84 (234)
Q Consensus 74 ~~lvl~~~~~~ 84 (234)
..+|+-.|+..
T Consensus 575 ~avia~VpfmD 585 (712)
T KOG2237|consen 575 GAVIAKVPFMD 585 (712)
T ss_pred hhhhhcCccee
Confidence 99887776654
No 183
>PLN00413 triacylglycerol lipase
Probab=97.38 E-value=0.00075 Score=51.01 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=28.0
Q ss_pred hhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHH
Q 026718 32 DFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 32 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
+..+.+.++++.. ...++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~-p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQN-PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHC-CCCeEEEEecCHHHHHHHHHHH
Confidence 3455667777766 6778999999999999998875
No 184
>PLN02454 triacylglycerol lipase
Probab=97.28 E-value=0.00082 Score=50.15 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=23.0
Q ss_pred HHHHHHHhcCCCC--ceEEEeeChhHHHHHHHHHh
Q 026718 36 PLIDFMAALPLDK--KVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 36 ~l~~~l~~~~~~~--~~~lvGhS~Gg~~a~~~a~~ 68 (234)
.|..+++.. ... ++++.|||+||.+|+.+|..
T Consensus 215 ~V~~l~~~Y-p~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERY-KDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhC-CCCCceEEEEecCHHHHHHHHHHHH
Confidence 344444444 333 49999999999999998854
No 185
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.27 E-value=0.0041 Score=45.34 Aligned_cols=41 Identities=27% Similarity=0.406 Sum_probs=34.4
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCC-cccceeEEeccCCCCC
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFP-NKISVAVFVSALKPGP 86 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~~~~ 86 (234)
+..+++|+||+.|+..++.+....+ ..++++|++++..+..
T Consensus 191 ~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 191 GGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQP 232 (310)
T ss_pred CCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcc
Confidence 5567999999999999999998876 4589999999876533
No 186
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.26 E-value=9.4e-05 Score=49.24 Aligned_cols=39 Identities=23% Similarity=0.222 Sum_probs=32.2
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
+..++.+.||||||.=|+..+.+.|.+.+++-..+|...
T Consensus 139 d~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 139 DPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred cchhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 345789999999999999989999998888877776543
No 187
>COG0627 Predicted esterase [General function prediction only]
Probab=97.26 E-value=0.00046 Score=50.04 Aligned_cols=59 Identities=22% Similarity=0.360 Sum_probs=43.2
Q ss_pred Cchhhhh-hHHHHHHHh-cCCC---CceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCCCC
Q 026718 28 RSISDFF-KPLIDFMAA-LPLD---KKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGP 86 (234)
Q Consensus 28 ~~~~~~~-~~l~~~l~~-~~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 86 (234)
+.+++++ +++-+.+.+ .+.. ++..++||||||.=|+.+|.++|+++..+.-.++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 4555543 455544443 3212 278999999999999999999999999999888866433
No 188
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=97.24 E-value=0.001 Score=48.68 Aligned_cols=42 Identities=24% Similarity=0.361 Sum_probs=32.9
Q ss_pred CCCCceEEEeeChhHHHHHHHHHhCCc-----ccceeEEeccCCCCC
Q 026718 45 PLDKKVILVGHSYGGLAVAQSMERFPN-----KISVAVFVSALKPGP 86 (234)
Q Consensus 45 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~ 86 (234)
.+.+|+.|||||+|+.+...+....++ .|..+++++.+.+..
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 367799999999999988877655443 388999998776654
No 189
>PLN02571 triacylglycerol lipase
Probab=97.24 E-value=0.00059 Score=50.90 Aligned_cols=38 Identities=11% Similarity=0.195 Sum_probs=28.0
Q ss_pred hhhhhHHHHHHHhcCCC-CceEEEeeChhHHHHHHHHHh
Q 026718 31 SDFFKPLIDFMAALPLD-KKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 31 ~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
+++..++..+++..++. -++++.|||+||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34556677777766222 368999999999999998764
No 190
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.21 E-value=0.0014 Score=43.65 Aligned_cols=49 Identities=18% Similarity=0.421 Sum_probs=35.7
Q ss_pred hHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh--C----CcccceeEEeccCCC
Q 026718 35 KPLIDFMAALPLDKKVILVGHSYGGLAVAQSMER--F----PNKISVAVFVSALKP 84 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~--~----p~~v~~lvl~~~~~~ 84 (234)
+.+.+....- ...+++|+|+|.|+.++..++.. . .++|.++++++-+..
T Consensus 69 ~~i~~~~~~C-P~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 69 RLIEEYAARC-PNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHhC-CCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 3333333443 67899999999999999999877 2 367889999986544
No 191
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.21 E-value=0.0051 Score=43.57 Aligned_cols=80 Identities=15% Similarity=0.113 Sum_probs=52.2
Q ss_pred CCCceEEeecCC-------CCCCCCCCCC---CCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCcc
Q 026718 4 SSGHNVTAFDLA-------ASGVEPQQVH---NLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNK 72 (234)
Q Consensus 4 ~~g~~vi~~D~~-------G~G~S~~~~~---~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 72 (234)
..||-|+.||-- +.|.+..+.. ...+...+++-+..++.+. -+..+|++.|.|-||.++..++..+|+.
T Consensus 89 ~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~ 168 (312)
T COG3509 89 REGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDI 168 (312)
T ss_pred ccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccc
Confidence 468899988521 2233322221 1122333334444444444 1335899999999999999999999999
Q ss_pred cceeEEeccCC
Q 026718 73 ISVAVFVSALK 83 (234)
Q Consensus 73 v~~lvl~~~~~ 83 (234)
+.++..+++..
T Consensus 169 faa~A~VAg~~ 179 (312)
T COG3509 169 FAAIAPVAGLL 179 (312)
T ss_pred ccceeeeeccc
Confidence 99998888765
No 192
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.20 E-value=0.0016 Score=49.31 Aligned_cols=79 Identities=25% Similarity=0.217 Sum_probs=63.1
Q ss_pred CCceEEeecCCCCCCCCCCCC------CCCchhhhhhHHHHHHHhcC------CCCceEEEeeChhHHHHHHHHHhCCcc
Q 026718 5 SGHNVTAFDLAASGVEPQQVH------NLRSISDFFKPLIDFMAALP------LDKKVILVGHSYGGLAVAQSMERFPNK 72 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~------~~~~~~~~~~~l~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 72 (234)
-|-.|+-+++|-+|.|..... ...+..+...|++++|+++. ...|.+.+|-|+-|.++..+-.+||+.
T Consensus 117 fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel 196 (514)
T KOG2182|consen 117 FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL 196 (514)
T ss_pred hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh
Confidence 366899999999998854322 22367788889999998872 224899999999999999999999999
Q ss_pred cceeEEeccCC
Q 026718 73 ISVAVFVSALK 83 (234)
Q Consensus 73 v~~lvl~~~~~ 83 (234)
+.+.|.-+++.
T Consensus 197 ~~GsvASSapv 207 (514)
T KOG2182|consen 197 TVGSVASSAPV 207 (514)
T ss_pred heeecccccce
Confidence 99988777654
No 193
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.18 E-value=0.02 Score=42.73 Aligned_cols=36 Identities=19% Similarity=0.134 Sum_probs=31.4
Q ss_pred CceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 48 KKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
-|++++|+|.||++|...|.-.|..+.+++=-++.+
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 489999999999999999999999999888666543
No 194
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.08 E-value=0.0007 Score=50.80 Aligned_cols=53 Identities=26% Similarity=0.314 Sum_probs=38.0
Q ss_pred hhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCc--------ccceeEEeccCC
Q 026718 31 SDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPN--------KISVAVFVSALK 83 (234)
Q Consensus 31 ~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~ 83 (234)
+++...+...|+.. .+.+|++|++|||||.+.+.+...+++ .+++++-++++.
T Consensus 162 d~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 162 DQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchh
Confidence 33444555555433 366999999999999999999988876 366777666544
No 195
>PLN02408 phospholipase A1
Probab=97.01 E-value=0.0014 Score=48.21 Aligned_cols=36 Identities=11% Similarity=0.169 Sum_probs=26.0
Q ss_pred hhHHHHHHHhcCC-CCceEEEeeChhHHHHHHHHHhC
Q 026718 34 FKPLIDFMAALPL-DKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 34 ~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
.+.|..+++..++ ..++++.|||+||.+|..+|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4556666666522 23699999999999999987643
No 196
>PLN02934 triacylglycerol lipase
Probab=96.98 E-value=0.0015 Score=49.82 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=27.4
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHH
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
..+.+.+++++. ...++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~-p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEH-KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHC-CCCeEEEeccccHHHHHHHHHH
Confidence 455566777766 6789999999999999998874
No 197
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.93 E-value=0.0085 Score=40.32 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=48.2
Q ss_pred CCCceEEeecCCC---CCCCC-CCCCCCCchhhhhhHH-HHHHHhcCCCCceEEEeeChhHHHHHHHHHhCC--ccccee
Q 026718 4 SSGHNVTAFDLAA---SGVEP-QQVHNLRSISDFFKPL-IDFMAALPLDKKVILVGHSYGGLAVAQSMERFP--NKISVA 76 (234)
Q Consensus 4 ~~g~~vi~~D~~G---~G~S~-~~~~~~~~~~~~~~~l-~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~l 76 (234)
+.||.|+..+.-- +-.+. .+.....+..+.+.-+ ..++... ....+.++.||+||...+.+..++| ++|.++
T Consensus 142 ~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw~~~v~pa-~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~ai 220 (297)
T KOG3967|consen 142 AEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVWKNIVLPA-KAESVFVVAHSYGGSLTLDLVERFPDDESVFAI 220 (297)
T ss_pred HcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHHHHHhccc-CcceEEEEEeccCChhHHHHHHhcCCccceEEE
Confidence 5688888876431 11111 1211222333333322 2223333 6788999999999999999999997 467788
Q ss_pred EEeccCC
Q 026718 77 VFVSALK 83 (234)
Q Consensus 77 vl~~~~~ 83 (234)
.+-+++.
T Consensus 221 alTDs~~ 227 (297)
T KOG3967|consen 221 ALTDSAM 227 (297)
T ss_pred Eeecccc
Confidence 8877663
No 198
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.92 E-value=0.0013 Score=48.42 Aligned_cols=64 Identities=20% Similarity=0.252 Sum_probs=49.7
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
|+++|+.|+.+|-.-+=.|. .+.++.++|+..+++.. -+.+++.|+|+|+|+-+.-..-.+.|.
T Consensus 283 l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 283 LQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 66789999999965554554 57888899998888876 267899999999999877666665553
No 199
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.90 E-value=0.0048 Score=44.05 Aligned_cols=35 Identities=23% Similarity=0.426 Sum_probs=27.2
Q ss_pred CceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 48 KKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
.++.++|||+||..++.....+ .+++..|+++...
T Consensus 241 s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 241 SQAAVIGHSFGGATSIASSSSH-TDFRCAIALDAWM 275 (399)
T ss_pred hhhhheeccccchhhhhhhccc-cceeeeeeeeeee
Confidence 4688999999999888877654 4578788787643
No 200
>PLN02324 triacylglycerol lipase
Probab=96.89 E-value=0.0021 Score=47.98 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=26.3
Q ss_pred hhhHHHHHHHhcCC-CCceEEEeeChhHHHHHHHHHh
Q 026718 33 FFKPLIDFMAALPL-DKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 33 ~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
..+.|..+++..++ ..++++.|||+||.+|+..|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34456667766622 2379999999999999998853
No 201
>PLN02310 triacylglycerol lipase
Probab=96.88 E-value=0.0041 Score=46.49 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=25.6
Q ss_pred hhhHHHHHHHhcC---CCCceEEEeeChhHHHHHHHHHh
Q 026718 33 FFKPLIDFMAALP---LDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 33 ~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
..+.+..+++... ...++++.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3445566665541 23479999999999999988753
No 202
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.81 E-value=0.0026 Score=45.13 Aligned_cols=38 Identities=24% Similarity=0.237 Sum_probs=33.5
Q ss_pred CCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCCC
Q 026718 47 DKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
...-+|+|-|+||.+++..+..||+++..++..+|...
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 34568999999999999999999999999998887654
No 203
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.78 E-value=0.0031 Score=49.39 Aligned_cols=79 Identities=18% Similarity=0.043 Sum_probs=49.1
Q ss_pred CceEEeecCC----CCCCCCCCC-CCCCchhhhh---hHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHh--CCcccc
Q 026718 6 GHNVTAFDLA----ASGVEPQQV-HNLRSISDFF---KPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMER--FPNKIS 74 (234)
Q Consensus 6 g~~vi~~D~~----G~G~S~~~~-~~~~~~~~~~---~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~ 74 (234)
++-|+++++| |++.+.... .....+.|.. +.+.+-+... .+.++|.|+|+|.||..+..++.. .+..++
T Consensus 125 ~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~ 204 (493)
T cd00312 125 NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFH 204 (493)
T ss_pred CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHH
Confidence 3889999998 333332111 1112333333 3344444444 356799999999999988877765 245688
Q ss_pred eeEEeccCCC
Q 026718 75 VAVFVSALKP 84 (234)
Q Consensus 75 ~lvl~~~~~~ 84 (234)
++|+.++...
T Consensus 205 ~~i~~sg~~~ 214 (493)
T cd00312 205 RAISQSGSAL 214 (493)
T ss_pred HHhhhcCCcc
Confidence 8888886543
No 204
>PLN02802 triacylglycerol lipase
Probab=96.76 E-value=0.0029 Score=48.38 Aligned_cols=37 Identities=14% Similarity=0.216 Sum_probs=26.0
Q ss_pred hhhHHHHHHHhcCC-CCceEEEeeChhHHHHHHHHHhC
Q 026718 33 FFKPLIDFMAALPL-DKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 33 ~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
..+.+..+++...+ ..++++.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455666665522 23789999999999999887643
No 205
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.74 E-value=0.0027 Score=48.69 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=26.6
Q ss_pred hhhHHHHHHHhcC---CCCceEEEeeChhHHHHHHHHHh
Q 026718 33 FFKPLIDFMAALP---LDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 33 ~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
..++|..+++... ...++++.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456667776652 23479999999999999988753
No 206
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.73 E-value=0.0074 Score=44.13 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=45.7
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCC-cEEEccCCCcceeecChHHHHHHHHHHhhcc
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPH-QVEEIKDSDHMVMMSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~ 233 (234)
.+|..++.|..|..+.+..+......+|+. -+..+|+..|... +..+.+.|..|+++|
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~flnrf 387 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLNRF 387 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHHHH
Confidence 679999999999999999999999999975 5788899999764 344555666666543
No 207
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.71 E-value=0.0089 Score=43.95 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=46.6
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCC------------------------C-CcEEEccCCCcceeecChHHHHHHHH
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNP------------------------P-HQVEEIKDSDHMVMMSKPLELWAHLL 227 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 227 (234)
.++||+..|..|.+++.-..+.+.+.+. + .++..+.++||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 5799999999999999776665555441 1 34556668999996 69999999999
Q ss_pred HHhhc
Q 026718 228 SIAGN 232 (234)
Q Consensus 228 ~fl~~ 232 (234)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99975
No 208
>PLN02753 triacylglycerol lipase
Probab=96.63 E-value=0.004 Score=47.87 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=25.7
Q ss_pred hhhHHHHHHHhcCC----CCceEEEeeChhHHHHHHHHHh
Q 026718 33 FFKPLIDFMAALPL----DKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 33 ~~~~l~~~l~~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
....|..+++..++ ..++++.|||+||.+|+..|..
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 33445566655522 3589999999999999998753
No 209
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.63 E-value=0.0054 Score=42.45 Aligned_cols=34 Identities=24% Similarity=0.115 Sum_probs=26.6
Q ss_pred CceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 48 KKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
-|++-+|||+|+-+-+.+...++..-++-++++-
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 3788899999999888888777655567777763
No 210
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=96.55 E-value=0.0097 Score=43.75 Aligned_cols=77 Identities=18% Similarity=0.292 Sum_probs=48.7
Q ss_pred ceEEeecCC-CCCCCCCCCCCCC-chhhhhhHHHHHHHh----cC--CCCceEEEeeChhHHHHHHHHHhC---------
Q 026718 7 HNVTAFDLA-ASGVEPQQVHNLR-SISDFFKPLIDFMAA----LP--LDKKVILVGHSYGGLAVAQSMERF--------- 69 (234)
Q Consensus 7 ~~vi~~D~~-G~G~S~~~~~~~~-~~~~~~~~l~~~l~~----~~--~~~~~~lvGhS~Gg~~a~~~a~~~--------- 69 (234)
.+++-+|.| |.|.|-......+ +-+..++|+..+++. .+ ...+++|.|-|+||..+-.+|...
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 368999998 9999964332111 112233555555544 32 467899999999998766666532
Q ss_pred -CcccceeEEeccCC
Q 026718 70 -PNKISVAVFVSALK 83 (234)
Q Consensus 70 -p~~v~~lvl~~~~~ 83 (234)
+-.++|+++-++..
T Consensus 82 ~~inLkGi~IGNg~t 96 (319)
T PLN02213 82 PPINLQGYMLGNPVT 96 (319)
T ss_pred CceeeeEEEeCCCCC
Confidence 12467887777654
No 211
>PLN02719 triacylglycerol lipase
Probab=96.51 E-value=0.0052 Score=47.13 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=25.2
Q ss_pred hhhHHHHHHHhcCC----CCceEEEeeChhHHHHHHHHHh
Q 026718 33 FFKPLIDFMAALPL----DKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 33 ~~~~l~~~l~~~~~----~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
....|..+++..+. ..++++.|||+||.+|...|..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 33445555555421 2479999999999999998753
No 212
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.42 E-value=0.02 Score=41.20 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=42.1
Q ss_pred CchhhhhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhCCc--ccceeEEeccCC
Q 026718 28 RSISDFFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERFPN--KISVAVFVSALK 83 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~ 83 (234)
..+.+.++.+-+-+...+ -.+-++++|+|.||.++-.++.+.|+ .|+.+|.++++.
T Consensus 73 ~~~~~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 73 MPLTQQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred eCHHHHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 355666666555554431 12459999999999999999999987 599999998754
No 213
>PLN02761 lipase class 3 family protein
Probab=96.40 E-value=0.0065 Score=46.73 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=24.6
Q ss_pred hhhHHHHHHHhcC-----CCCceEEEeeChhHHHHHHHHH
Q 026718 33 FFKPLIDFMAALP-----LDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 33 ~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
+.+.|..+++..+ ..-++++.|||+||.+|...|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445555555541 1237999999999999998875
No 214
>PLN02209 serine carboxypeptidase
Probab=96.31 E-value=0.016 Score=44.52 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=47.5
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhC------------------------CC-CcEEEccCCCcceeecChHHHHHHHH
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRN------------------------PP-HQVEEIKDSDHMVMMSKPLELWAHLL 227 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 227 (234)
.+++++..|+.|.+++.-..+.+.+.+ .+ .+++.+.++||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 579999999999999987666665554 12 44566778999996 69999999999
Q ss_pred HHhhc
Q 026718 228 SIAGN 232 (234)
Q Consensus 228 ~fl~~ 232 (234)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99864
No 215
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.26 E-value=0.018 Score=44.11 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=47.5
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCC------------------------C-CcEEEccCCCcceeecChHHHHHHHH
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNP------------------------P-HQVEEIKDSDHMVMMSKPLELWAHLL 227 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~p~~~~~~i~ 227 (234)
.++||+..|+.|.+++.-..+.+.+.+. + .+++.+.++||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5799999999999999877666665541 1 34566778999996 69999999999
Q ss_pred HHhhc
Q 026718 228 SIAGN 232 (234)
Q Consensus 228 ~fl~~ 232 (234)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99975
No 216
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.24 E-value=0.013 Score=44.74 Aligned_cols=59 Identities=20% Similarity=0.175 Sum_probs=47.5
Q ss_pred ccEEEEeeCCCccccHHHHHHHHHhC---------C----------------CCcEEEccCCCcceeecChHHHHHHHHH
Q 026718 174 VRRVYIISEKDLVTEKDLAMWMIKRN---------P----------------PHQVEEIKDSDHMVMMSKPLELWAHLLS 228 (234)
Q Consensus 174 ~P~l~i~g~~D~~~~~~~~~~~~~~~---------~----------------~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 228 (234)
.+++|..|+.|.++|.-..+...+.+ | +..+..+.|+||++..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 69999999999999987766654433 1 1223667899999999999999999999
Q ss_pred Hhhc
Q 026718 229 IAGN 232 (234)
Q Consensus 229 fl~~ 232 (234)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9975
No 217
>PLN02847 triacylglycerol lipase
Probab=96.24 E-value=0.0099 Score=46.49 Aligned_cols=23 Identities=39% Similarity=0.390 Sum_probs=19.6
Q ss_pred CCCceEEEeeChhHHHHHHHHHh
Q 026718 46 LDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 55689999999999999887764
No 218
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=96.23 E-value=0.0094 Score=44.08 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=30.8
Q ss_pred hhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh
Q 026718 31 SDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 31 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
..+.+++..++... ..-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~-~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELY-PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhc-CCcEEEEecCChHHHHHHHHHHH
Confidence 45667777888887 78899999999999999988764
No 219
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.22 E-value=0.016 Score=38.57 Aligned_cols=61 Identities=8% Similarity=0.067 Sum_probs=46.8
Q ss_pred CccEEEEeeCCCccccHHHHHHHH---HhCCC--CcEEEccCCCcceeecCh---HHHHHHHHHHhhcc
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMI---KRNPP--HQVEEIKDSDHMVMMSKP---LELWAHLLSIAGNY 233 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~---~~~~~--~~~~~~~~~gH~~~~~~p---~~~~~~i~~fl~~~ 233 (234)
+++.+-|=|+.|.++.+..+.... ..+|. ...++.+++||+-.+.-+ +++.-.|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 668888999999999877555444 44452 356778899999888755 78889999999764
No 220
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.20 E-value=0.027 Score=43.83 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=56.0
Q ss_pred CCCCceEEeecCCCCCCCCC--CCCCCC-----------chhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHH
Q 026718 3 KSSGHNVTAFDLAASGVEPQ--QVHNLR-----------SISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~--~~~~~~-----------~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
..+||.++.=|- ||..+.. ...... ++.+.+.--+++++.. ...+.-+..|.|-||.-++..|.
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 357899999887 7765532 111001 2222333334455544 35567899999999999999999
Q ss_pred hCCcccceeEEeccCCC
Q 026718 68 RFPNKISVAVFVSALKP 84 (234)
Q Consensus 68 ~~p~~v~~lvl~~~~~~ 84 (234)
+||+.+++++.-+|...
T Consensus 135 ryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 135 RYPEDFDGILAGAPAIN 151 (474)
T ss_pred hChhhcCeEEeCCchHH
Confidence 99999999999888654
No 221
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.11 E-value=0.019 Score=44.71 Aligned_cols=55 Identities=24% Similarity=0.395 Sum_probs=34.2
Q ss_pred chhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHh-----CCc------ccceeEEeccCC
Q 026718 29 SISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMER-----FPN------KISVAVFVSALK 83 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lvl~~~~~ 83 (234)
++..-...+.+.+.+. ++.++++.+||||||.++=.+... .|+ ...++++++.+.
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 3334444444444443 357899999999999877665432 232 356788887654
No 222
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.08 E-value=0.012 Score=45.87 Aligned_cols=80 Identities=20% Similarity=0.231 Sum_probs=54.7
Q ss_pred CCCCceEEeecCCCCCCCCCCC-------CCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCcccc
Q 026718 3 KSSGHNVTAFDLAASGVEPQQV-------HNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKIS 74 (234)
Q Consensus 3 ~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 74 (234)
.++|...+..++||=|+=.... .....++|++.-+.+++++- ...+++.+.|-|=||.+.-....++|+.+.
T Consensus 447 LerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfg 526 (648)
T COG1505 447 LERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFG 526 (648)
T ss_pred HhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhC
Confidence 4677777888999977554211 11134555555555555542 234678999999999988888889999988
Q ss_pred eeEEeccC
Q 026718 75 VAVFVSAL 82 (234)
Q Consensus 75 ~lvl~~~~ 82 (234)
++|+--|.
T Consensus 527 A~v~evPl 534 (648)
T COG1505 527 AAVCEVPL 534 (648)
T ss_pred ceeeccch
Confidence 88766554
No 223
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.02 E-value=0.12 Score=38.25 Aligned_cols=61 Identities=20% Similarity=0.184 Sum_probs=46.7
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhC----CCCcEEEccCCCcceee-cChHHHHHHHHHHhhcc
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRN----PPHQVEEIKDSDHMVMM-SKPLELWAHLLSIAGNY 233 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~ 233 (234)
..+.+.+.+..|.++|.+..+++.+.. -+++-+-+.++-|..++ ..|..+.+...+|+++.
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 457889999999999998877774433 24455667789998876 47888999999998753
No 224
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=95.85 E-value=0.01 Score=45.29 Aligned_cols=81 Identities=20% Similarity=0.209 Sum_probs=51.1
Q ss_pred CCCCC-ceEEeecCC----CC------CCCCCCCCCCCchhhhh---hHHHHHHHhc-CCCCceEEEeeChhHHHHHHHH
Q 026718 2 IKSSG-HNVTAFDLA----AS------GVEPQQVHNLRSISDFF---KPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 2 l~~~g-~~vi~~D~~----G~------G~S~~~~~~~~~~~~~~---~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a 66 (234)
|+++| +-|+++++| |+ +..+....+ ..+.|.+ +.+.+-|.+. ++.++|.|+|+|.||+.++.+.
T Consensus 120 La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n-~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Ll 198 (491)
T COG2272 120 LAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN-LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLL 198 (491)
T ss_pred HHhcCCEEEEEeCcccccceeeehhhcccccccccc-ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhh
Confidence 55666 778888876 22 111111111 2444433 4566667777 4567899999999999777665
Q ss_pred HhCC---cccceeEEeccCCC
Q 026718 67 ERFP---NKISVAVFVSALKP 84 (234)
Q Consensus 67 ~~~p---~~v~~lvl~~~~~~ 84 (234)
+. | ..+.++|+.++...
T Consensus 199 a~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 199 AV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cC-ccchHHHHHHHHhCCCCC
Confidence 43 4 46888888888764
No 225
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=95.80 E-value=0.0092 Score=42.35 Aligned_cols=55 Identities=18% Similarity=0.303 Sum_probs=36.6
Q ss_pred chhhhhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhCCc-ccceeEEeccCC
Q 026718 29 SISDFFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERFPN-KISVAVFVSALK 83 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 83 (234)
++.+.++.+.+.+...+ -.+-++++|+|.||.++-.++.++|+ .|+.+|.++++.
T Consensus 60 ~v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 60 NVNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp HHHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred HHHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 34455555555555431 12569999999999999999999874 699999998754
No 226
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.77 E-value=0.023 Score=43.50 Aligned_cols=79 Identities=18% Similarity=0.234 Sum_probs=50.0
Q ss_pred eEEeec-CCCCCCCCC-CCCCCCchhhhhhHHHHHHHhc--------CCCCceEEEeeChhHHHHHHHHHhCCc---ccc
Q 026718 8 NVTAFD-LAASGVEPQ-QVHNLRSISDFFKPLIDFMAAL--------PLDKKVILVGHSYGGLAVAQSMERFPN---KIS 74 (234)
Q Consensus 8 ~vi~~D-~~G~G~S~~-~~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~ 74 (234)
.++-+| .-|.|.|.. .....-++....+|+..+.+.. ....+.+|+|-|+||.-+-.+|...-+ ..+
T Consensus 148 dLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~ 227 (498)
T COG2939 148 DLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALN 227 (498)
T ss_pred ceEEEecCcccCcccccccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccC
Confidence 678899 559998874 2222234555555555444432 234599999999999988887765433 356
Q ss_pred eeEEeccCCCCC
Q 026718 75 VAVFVSALKPGP 86 (234)
Q Consensus 75 ~lvl~~~~~~~~ 86 (234)
+++++.+.....
T Consensus 228 ~~~nlssvlign 239 (498)
T COG2939 228 GNVNLSSVLIGN 239 (498)
T ss_pred CceEeeeeeecC
Confidence 666666654333
No 227
>PLN02209 serine carboxypeptidase
Probab=95.51 E-value=0.049 Score=41.89 Aligned_cols=77 Identities=22% Similarity=0.353 Sum_probs=48.2
Q ss_pred ceEEeec-CCCCCCCCCCCC-CCCchhhhhhHHHHHHHhc----C--CCCceEEEeeChhHHHHHHHHHhC---------
Q 026718 7 HNVTAFD-LAASGVEPQQVH-NLRSISDFFKPLIDFMAAL----P--LDKKVILVGHSYGGLAVAQSMERF--------- 69 (234)
Q Consensus 7 ~~vi~~D-~~G~G~S~~~~~-~~~~~~~~~~~l~~~l~~~----~--~~~~~~lvGhS~Gg~~a~~~a~~~--------- 69 (234)
.+++-+| ..|.|.|-.... ...+-++.++++.+++... + ...+++|.|.|+||..+-.+|...
T Consensus 118 anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~ 197 (437)
T PLN02209 118 ANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCN 197 (437)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccC
Confidence 5789999 458999854322 1122233456665555543 2 346899999999998666655432
Q ss_pred -CcccceeEEeccCC
Q 026718 70 -PNKISVAVFVSALK 83 (234)
Q Consensus 70 -p~~v~~lvl~~~~~ 83 (234)
+-.++++++.++..
T Consensus 198 ~~inl~Gi~igng~t 212 (437)
T PLN02209 198 PPINLQGYVLGNPIT 212 (437)
T ss_pred CceeeeeEEecCccc
Confidence 12467888877654
No 228
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=95.42 E-value=0.13 Score=35.75 Aligned_cols=77 Identities=21% Similarity=0.175 Sum_probs=47.0
Q ss_pred CceEEeecCCCC-CC-CC-CCCCCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCc------ccce
Q 026718 6 GHNVTAFDLAAS-GV-EP-QQVHNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPN------KISV 75 (234)
Q Consensus 6 g~~vi~~D~~G~-G~-S~-~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~ 75 (234)
|+.+..++.|.. +- +. .......+..+=++.+.+.|+.. ...++++++|+|.|+.++...+.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 677778887761 11 00 01111246666666677777653 256889999999999999887765411 2334
Q ss_pred eEEeccC
Q 026718 76 AVFVSAL 82 (234)
Q Consensus 76 lvl~~~~ 82 (234)
+|+++-+
T Consensus 82 fVl~gnP 88 (225)
T PF08237_consen 82 FVLIGNP 88 (225)
T ss_pred EEEecCC
Confidence 5666544
No 229
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.40 E-value=0.051 Score=41.74 Aligned_cols=77 Identities=18% Similarity=0.289 Sum_probs=46.8
Q ss_pred ceEEeec-CCCCCCCCCCCCCCCch-hhhhhHHHHHHH----hcC--CCCceEEEeeChhHHHHHHHHHhC---------
Q 026718 7 HNVTAFD-LAASGVEPQQVHNLRSI-SDFFKPLIDFMA----ALP--LDKKVILVGHSYGGLAVAQSMERF--------- 69 (234)
Q Consensus 7 ~~vi~~D-~~G~G~S~~~~~~~~~~-~~~~~~l~~~l~----~~~--~~~~~~lvGhS~Gg~~a~~~a~~~--------- 69 (234)
.+++-+| ..|.|.|........+- .+.++++.+++. ..+ ...+++|.|.|+||..+-.+|...
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 6789999 55999986433211111 122344444444 332 357899999999998666655431
Q ss_pred -CcccceeEEeccCC
Q 026718 70 -PNKISVAVFVSALK 83 (234)
Q Consensus 70 -p~~v~~lvl~~~~~ 83 (234)
+-.++|+++-+|..
T Consensus 196 ~~inLkGi~iGNg~t 210 (433)
T PLN03016 196 PPINLQGYMLGNPVT 210 (433)
T ss_pred CcccceeeEecCCCc
Confidence 12577888877654
No 230
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.39 E-value=0.052 Score=46.33 Aligned_cols=71 Identities=15% Similarity=0.207 Sum_probs=53.0
Q ss_pred cCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCC--cccceeEEeccCC
Q 026718 13 DLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFP--NKISVAVFVSALK 83 (234)
Q Consensus 13 D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~ 83 (234)
..|.+|.-....-+..++++.+.-...-++++....|..++|+|+|+.++..+|.... +....+|++++.+
T Consensus 2147 e~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2147 EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred CCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 4455664433333346899999888888888878899999999999999999987543 3456688888754
No 231
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.33 E-value=0.024 Score=36.36 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.1
Q ss_pred CCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 47 DKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
-+.+.||++|||-.+|-.+...++ +++.+.+++..
T Consensus 56 y~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 56 YRHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred hhhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCC
Confidence 356789999999999999888664 66676676543
No 232
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.89 E-value=0.063 Score=38.08 Aligned_cols=30 Identities=30% Similarity=0.418 Sum_probs=24.2
Q ss_pred HHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 41 MAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 41 l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+..+....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333347789999999999999999888763
No 233
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.89 E-value=0.063 Score=38.08 Aligned_cols=30 Identities=30% Similarity=0.418 Sum_probs=24.2
Q ss_pred HHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 41 MAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 41 l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+..+....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333347789999999999999999888763
No 234
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.73 E-value=0.077 Score=40.83 Aligned_cols=45 Identities=20% Similarity=0.236 Sum_probs=34.4
Q ss_pred CCCCceEEEeeChhHHHHHHHHHhC-----CcccceeEEeccCCCCCCcc
Q 026718 45 PLDKKVILVGHSYGGLAVAQSMERF-----PNKISVAVFVSALKPGPDLN 89 (234)
Q Consensus 45 ~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~ 89 (234)
.+.+|+.|||+|+|+.+........ -..|..+++++++.+.....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~ 493 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKL 493 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHH
Confidence 5889999999999999888665422 24588899999887765443
No 235
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=94.44 E-value=0.36 Score=34.18 Aligned_cols=74 Identities=18% Similarity=0.267 Sum_probs=48.1
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhCCc-ccceeEEeccCC
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERFPN-KISVAVFVSALK 83 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~ 83 (234)
|..|+++|. |-| ........+.+.++-+-+.+...+ -.+-++++|.|.||.++-.++...++ .|..+|.++++.
T Consensus 53 g~~v~~lei-g~g---~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 53 GSPVYCLEI-GDG---IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred CCeeEEEEe-cCC---cchhhhccHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 455666665 444 111112345666666555555431 24569999999999999999987764 588888888754
No 236
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.95 E-value=0.064 Score=34.96 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=32.8
Q ss_pred CCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 47 DKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
..+.++-|.||||+.|..+.-++|+.+.++|.+++..
T Consensus 100 pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 100 PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 4557788999999999999999999999999998754
No 237
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=93.68 E-value=0.079 Score=42.06 Aligned_cols=80 Identities=18% Similarity=0.023 Sum_probs=45.1
Q ss_pred CCCceEEeecCC----CCCCCCCC--CCCCCchhhhhh---HHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhC--Cc
Q 026718 4 SSGHNVTAFDLA----ASGVEPQQ--VHNLRSISDFFK---PLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERF--PN 71 (234)
Q Consensus 4 ~~g~~vi~~D~~----G~G~S~~~--~~~~~~~~~~~~---~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~--p~ 71 (234)
.++.-|+++.+| |+-.+... ....+.+.|+.. .|.+-|... ++.++|.|+|||.||..+...+..- ..
T Consensus 154 ~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~ 233 (535)
T PF00135_consen 154 SKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKG 233 (535)
T ss_dssp HHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTT
T ss_pred CCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccc
Confidence 345667777777 33322211 111245555544 344445555 3457899999999999666555431 35
Q ss_pred ccceeEEeccCC
Q 026718 72 KISVAVFVSALK 83 (234)
Q Consensus 72 ~v~~lvl~~~~~ 83 (234)
.+.++|+.++..
T Consensus 234 LF~raI~~SGs~ 245 (535)
T PF00135_consen 234 LFHRAILQSGSA 245 (535)
T ss_dssp SBSEEEEES--T
T ss_pred cccccccccccc
Confidence 799999999854
No 238
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.59 E-value=0.16 Score=36.88 Aligned_cols=76 Identities=11% Similarity=0.101 Sum_probs=54.0
Q ss_pred eEEeecCC-CCCCCCCCC--CCCCchhhhhhHHHHHHHhc------CCCCceEEEeeChhHHHHHHHHHhCCc-------
Q 026718 8 NVTAFDLA-ASGVEPQQV--HNLRSISDFFKPLIDFMAAL------PLDKKVILVGHSYGGLAVAQSMERFPN------- 71 (234)
Q Consensus 8 ~vi~~D~~-G~G~S~~~~--~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~------- 71 (234)
.++-+|-| |.|.|-... ....+.++.+.|+.++++.+ -...|++++.-|+||-+|..++...-+
T Consensus 73 dllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i 152 (414)
T KOG1283|consen 73 DLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEI 152 (414)
T ss_pred cEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCce
Confidence 46667766 888885433 23457888999999999876 145689999999999999888764322
Q ss_pred --ccceeEEeccCC
Q 026718 72 --KISVAVFVSALK 83 (234)
Q Consensus 72 --~v~~lvl~~~~~ 83 (234)
.+.+++|=++..
T Consensus 153 ~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 153 KLNFIGVALGDSWI 166 (414)
T ss_pred eecceeEEccCccc
Confidence 355666666543
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=92.35 E-value=0.98 Score=26.90 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=35.6
Q ss_pred hhhhHHHHHHHhcCCCCceEEEeeChhHH--HHHHHHHhCCcccceeEE
Q 026718 32 DFFKPLIDFMAALPLDKKVILVGHSYGGL--AVAQSMERFPNKISVAVF 78 (234)
Q Consensus 32 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~--~a~~~a~~~p~~v~~lvl 78 (234)
.=...+..+++.. ...++++||-|--.= +-..++.++|++|.++.+
T Consensus 50 ~K~~~i~~i~~~f-P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 50 HKRDNIERILRDF-PERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHHHC-CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 4455677888888 889999999876553 555678899999988754
No 240
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=91.30 E-value=0.083 Score=39.66 Aligned_cols=75 Identities=17% Similarity=0.131 Sum_probs=58.2
Q ss_pred eEEeecCCCCCCCCCCCC--CCCchhhhhhHHHHHHHhcC--CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 8 NVTAFDLAASGVEPQQVH--NLRSISDFFKPLIDFMAALP--LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 8 ~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+-+.+.+|-+|.|...+. ...++++-+.|.+.+++.++ =.++.+--|-|-||+.++.+=.-||+.|.+.|--..+
T Consensus 90 NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 90 NQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 456788899998865433 23589999999998888772 2357888999999999999888899999988655443
No 241
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=87.97 E-value=2.7 Score=33.80 Aligned_cols=56 Identities=21% Similarity=0.159 Sum_probs=36.0
Q ss_pred CchhhhhhH---HHHHHHhc-CCCCceEEEeeChhHHHHHHHHHh--CCcccceeEEeccCC
Q 026718 28 RSISDFFKP---LIDFMAAL-PLDKKVILVGHSYGGLAVAQSMER--FPNKISVAVFVSALK 83 (234)
Q Consensus 28 ~~~~~~~~~---l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 83 (234)
+.+.|++.. +.+-|... ++.++|.++|||.||..+..+... ....+.++|.+++..
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 456555544 34444444 467899999999999987666542 124566667666543
No 242
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=87.41 E-value=0.58 Score=34.60 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=23.1
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHH
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
+.++++.. +.++-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~-Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSW-GIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHT-THCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhccc-ccccceeeccchhhHHHHHHCC
Confidence 34555666 7899999999999998886643
No 243
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=87.37 E-value=0.74 Score=35.75 Aligned_cols=59 Identities=10% Similarity=-0.035 Sum_probs=39.1
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCC-------CCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNP-------PHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~-------~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
+.+++...|=.|..+++-......+..+ ...+.+++ +||++++++|+...+.+..|+..
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHhh
Confidence 4466666666666666543332222222 23456666 99999999999999999988754
No 244
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=87.06 E-value=1.2 Score=32.67 Aligned_cols=32 Identities=19% Similarity=0.054 Sum_probs=25.6
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.+.+++. +...-.++|.|+|+.++..++..+
T Consensus 33 vL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEA-GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCC
Confidence 44555555 777888999999999999999864
No 245
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=86.32 E-value=1.2 Score=32.54 Aligned_cols=29 Identities=24% Similarity=0.233 Sum_probs=22.9
Q ss_pred HHHHHhcCCCCceEEEeeChhHHHHHHHHH
Q 026718 38 IDFMAALPLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 38 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
.++++.. +.++-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~~-Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSW-GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHc-CCcccEEEecCHHHHHHHHHhC
Confidence 3455666 7889999999999998877654
No 246
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=86.32 E-value=2 Score=33.40 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=48.6
Q ss_pred ceEEeecCC-CCCCCCCCCCC--CCchhhhhhHHHHHHH----hc--CCCCceEEEeeChhHHHHHHHHHh----C----
Q 026718 7 HNVTAFDLA-ASGVEPQQVHN--LRSISDFFKPLIDFMA----AL--PLDKKVILVGHSYGGLAVAQSMER----F---- 69 (234)
Q Consensus 7 ~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~~l~~~l~----~~--~~~~~~~lvGhS~Gg~~a~~~a~~----~---- 69 (234)
-+++-+|.| |.|.|-..... ..+-+..++|...++. +. -..++++|.|-|++|...-.+|.. .
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 468888987 88888643321 1234445566555554 33 256799999999999766666543 2
Q ss_pred --CcccceeEEeccCCC
Q 026718 70 --PNKISVAVFVSALKP 84 (234)
Q Consensus 70 --p~~v~~lvl~~~~~~ 84 (234)
+-.++|+++-+|...
T Consensus 198 ~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 198 KPNINLKGYAIGNGLTD 214 (454)
T ss_pred CCcccceEEEecCcccC
Confidence 124677776666543
No 247
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=85.90 E-value=1.3 Score=32.31 Aligned_cols=29 Identities=28% Similarity=0.247 Sum_probs=22.5
Q ss_pred HHHHHhcCCCCceEEEeeChhHHHHHHHHH
Q 026718 38 IDFMAALPLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 38 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
.+++... +.++..++|||+|-+.|+.++.
T Consensus 67 ~~~l~~~-g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLAL-LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhc-CCCCcEEeecCHHHHHHHHHhC
Confidence 3445555 7789999999999998887654
No 248
>PRK10279 hypothetical protein; Provisional
Probab=85.45 E-value=1.6 Score=32.05 Aligned_cols=33 Identities=21% Similarity=0.091 Sum_probs=26.0
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+.+.+++. +...-.++|.|+|+.++..||....
T Consensus 23 VL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKV-GIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34455555 7888999999999999999997654
No 249
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=84.88 E-value=2 Score=28.47 Aligned_cols=31 Identities=16% Similarity=0.030 Sum_probs=24.2
Q ss_pred HHHHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 39 DFMAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+.+.+. +...-.++|.|.|+.++..++...+
T Consensus 18 ~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 18 KALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 344444 6678899999999999999998654
No 250
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=84.55 E-value=2 Score=29.05 Aligned_cols=30 Identities=17% Similarity=0.077 Sum_probs=23.3
Q ss_pred HHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 39 DFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.+++. +...-.++|.|.||.++..++..+
T Consensus 19 ~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEA-GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHc-CCCcceEEEECHHHHHHHHHHcCC
Confidence 334444 566789999999999999998754
No 251
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=84.53 E-value=18 Score=28.57 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=28.5
Q ss_pred hhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhC
Q 026718 33 FFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 33 ~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
..+-|.+.++.|+ ..+.++|-|-|||..-|+.++++.
T Consensus 341 I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 341 IINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 4445666677772 346799999999999999999865
No 252
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=84.36 E-value=2.1 Score=30.86 Aligned_cols=32 Identities=9% Similarity=-0.007 Sum_probs=25.3
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.+.+++. +...-.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEA-GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHc-CCCccEEEEECHHHHHHHHHHcCC
Confidence 44455555 777788999999999999998764
No 253
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=83.65 E-value=1.8 Score=31.49 Aligned_cols=29 Identities=17% Similarity=0.062 Sum_probs=21.6
Q ss_pred HHHhcCCCCceEEEeeChhHHHHHHHHHh
Q 026718 40 FMAALPLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 40 ~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
.+...++..+..++|||+|=+.|+.++..
T Consensus 75 ~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 75 KLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 34444228899999999999988877643
No 254
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=83.62 E-value=4.9 Score=27.60 Aligned_cols=51 Identities=16% Similarity=0.058 Sum_probs=38.4
Q ss_pred CCchhhhhhHHHHHHHhcCCCCceEEEeeCh----hHHHHHHHHHhCC-cccceeEEe
Q 026718 27 LRSISDFFKPLIDFMAALPLDKKVILVGHSY----GGLAVAQSMERFP-NKISVAVFV 79 (234)
Q Consensus 27 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~lvl~ 79 (234)
.|+.+.+++.+.+++++. + ..++|+|+|. |..++-.+|.+.. ..+..++-+
T Consensus 90 ~~~~e~~a~al~~~i~~~-~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 90 GADTLATAKALAAAIKKI-G-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCChHHHHHHHHHHHHHh-C-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 367889999999999887 4 6799999998 7788888887653 244444444
No 255
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=83.21 E-value=2 Score=33.83 Aligned_cols=60 Identities=10% Similarity=-0.015 Sum_probs=43.0
Q ss_pred CccEEEEeeCCCccccHHHHHHHH----HhCCC--------CcEEEccCCCcceeec--ChHHHHHHHHHHhhc
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMI----KRNPP--------HQVEEIKDSDHMVMMS--KPLELWAHLLSIAGN 232 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~----~~~~~--------~~~~~~~~~gH~~~~~--~p~~~~~~i~~fl~~ 232 (234)
.-.+++.||..|.++++..+..+. +..+. .++..+||.+|+.--. .+-.....|.+|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 458999999999999977544433 33321 3788899999987644 344566788888874
No 256
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=83.14 E-value=0.54 Score=35.39 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=22.2
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeChhHHHHHHH
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSYGGLAVAQS 65 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~ 65 (234)
.++++.+.+... ..+++-.+|||+||.++..+
T Consensus 136 la~~~~e~~~~~-si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 136 LAEEVKETLYDY-SIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred cHHHHhhhhhcc-ccceeeeeeeecCCeeeeEE
Confidence 344444444444 56899999999999976654
No 257
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=83.11 E-value=2.2 Score=31.43 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=26.4
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.+.++.. +..+-.+.|.|+|+.++..+|..+
T Consensus 29 Vl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEA-GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHc-CCCccEEEecCHHHHHHHHHHcCC
Confidence 44556666 789999999999999999999854
No 258
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=82.77 E-value=2.9 Score=29.15 Aligned_cols=31 Identities=13% Similarity=0.048 Sum_probs=23.5
Q ss_pred HHHHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 39 DFMAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+.+.+. +.+.-.++|.|.|+.++..++...+
T Consensus 20 ~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 20 AALLEM-GLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHc-CCCceEEEEeCHHHHHHHHHHcCCC
Confidence 334444 5667789999999999999987553
No 259
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=81.89 E-value=3.8 Score=29.54 Aligned_cols=52 Identities=19% Similarity=0.333 Sum_probs=33.5
Q ss_pred hhhHHHHHHHhcC--CCCceEEEeeChhHHHHHHHH---HhCCcccceeEEeccCCC
Q 026718 33 FFKPLIDFMAALP--LDKKVILVGHSYGGLAVAQSM---ERFPNKISVAVFVSALKP 84 (234)
Q Consensus 33 ~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a---~~~p~~v~~lvl~~~~~~ 84 (234)
+.+.+.+-+..++ ...+++|.|-|+|++-+.... ...-+++.+.++.+|+..
T Consensus 92 L~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 92 LFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred HHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 3334444455552 335799999999998555432 233467999999987643
No 260
>COG0218 Predicted GTPase [General function prediction only]
Probab=81.87 E-value=2.3 Score=28.86 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=30.9
Q ss_pred CccEEEEeeCCCccccHHHH---HHHHHhC---CCCc--EEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 173 TVRRVYIISEKDLVTEKDLA---MWMIKRN---PPHQ--VEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~---~~~~~~~---~~~~--~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
++|++++.-.-|.+-..+.. ...++.+ +... ++.++-.... .-+++.+.|.+++..
T Consensus 135 ~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~----Gi~~l~~~i~~~~~~ 198 (200)
T COG0218 135 GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKK----GIDELKAKILEWLKE 198 (200)
T ss_pred CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEeccccc----CHHHHHHHHHHHhhc
Confidence 78999999999988764443 3333332 2222 3444322211 136677777776653
No 261
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=80.40 E-value=3.6 Score=27.40 Aligned_cols=30 Identities=20% Similarity=0.038 Sum_probs=23.3
Q ss_pred HHHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 40 FMAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 40 ~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
.+++. +...-.++|.|.|+.++..++...+
T Consensus 21 ~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34444 5667789999999999999987654
No 262
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=79.50 E-value=4.4 Score=29.42 Aligned_cols=40 Identities=15% Similarity=0.232 Sum_probs=28.6
Q ss_pred chhhhhhHHHHHH-HhcCCCCceEEEeeChhHHHHHHHHHh
Q 026718 29 SISDFFKPLIDFM-AALPLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 29 ~~~~~~~~l~~~l-~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
.+++-+.+....+ +.....+++.++|+|-|+..|-.++..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 4555554444333 444567889999999999999998864
No 263
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=79.41 E-value=4 Score=28.28 Aligned_cols=32 Identities=22% Similarity=0.148 Sum_probs=24.9
Q ss_pred HHHHHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 38 IDFMAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 38 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
.+.+.+. +...-.++|.|.|+.++..++...+
T Consensus 17 l~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3444445 5677789999999999999998764
No 264
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=79.07 E-value=2.4 Score=30.49 Aligned_cols=20 Identities=30% Similarity=0.537 Sum_probs=15.1
Q ss_pred HHhcCCCCceEEEeeChhHH
Q 026718 41 MAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 41 l~~~~~~~~~~lvGhS~Gg~ 60 (234)
.+.+.....|+++|||+|..
T Consensus 228 ~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 228 FESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HhhhcCCCEEEEEeCCCchh
Confidence 33334568899999999985
No 265
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=77.73 E-value=3.6 Score=32.97 Aligned_cols=30 Identities=17% Similarity=0.196 Sum_probs=23.7
Q ss_pred HHH-HhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 39 DFM-AALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 39 ~~l-~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+++ +.. +.+|-.++|||+|=+.|+..|.-.
T Consensus 256 ~ll~~~~-GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 256 QLLCDEF-AIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHhc-CCCCCEEeecCHHHHHHHHHhCCC
Confidence 444 355 889999999999999888877644
No 266
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=77.03 E-value=6 Score=26.29 Aligned_cols=30 Identities=17% Similarity=0.070 Sum_probs=22.6
Q ss_pred HHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 39 DFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.++.. +...-.++|.|.|+.++..++...
T Consensus 20 ~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 334444 556778999999999999998654
No 267
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=76.51 E-value=2.6 Score=32.66 Aligned_cols=28 Identities=21% Similarity=0.141 Sum_probs=23.0
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
+..+-++.|.|.|+.+|..++...++.+
T Consensus 99 gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 99 NLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 5667789999999999999998665554
No 268
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=74.42 E-value=2.1 Score=27.97 Aligned_cols=48 Identities=25% Similarity=0.247 Sum_probs=26.5
Q ss_pred cCCCCCCCC--CCCCCCCchhhhhhHHH----HHHHhc---CCCCceEEEeeChhHH
Q 026718 13 DLAASGVEP--QQVHNLRSISDFFKPLI----DFMAAL---PLDKKVILVGHSYGGL 60 (234)
Q Consensus 13 D~~G~G~S~--~~~~~~~~~~~~~~~l~----~~l~~~---~~~~~~~lvGhS~Gg~ 60 (234)
-+-|||... ...-..++..+++.-+. .+-+.. ...+++.|+|.|++..
T Consensus 60 ~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 345898772 22223467888887773 333332 1356899999999987
No 269
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=73.87 E-value=3.3 Score=31.64 Aligned_cols=57 Identities=19% Similarity=0.159 Sum_probs=37.1
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecC-----hHHHHHHHHHHhh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSK-----PLELWAHLLSIAG 231 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-----p~~~~~~i~~fl~ 231 (234)
.-.+++|+|++|++..... .+-+...++.+.+.||++|...+.. .++....|..|..
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 3479999999999864321 1111224667888899999876642 2455666777653
No 270
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=73.75 E-value=2.7 Score=32.33 Aligned_cols=31 Identities=19% Similarity=0.104 Sum_probs=24.8
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCccccee
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVA 76 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 76 (234)
+..+-+++|.|.|+.+|..++...++.+..+
T Consensus 93 gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 93 DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 5677789999999999999998666555444
No 271
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=73.35 E-value=7.8 Score=27.87 Aligned_cols=26 Identities=19% Similarity=0.144 Sum_probs=20.9
Q ss_pred CCC-ceEEEeeChhHHHHHHHHHhCCc
Q 026718 46 LDK-KVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 46 ~~~-~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
+.. .-.++|.|.|+.++..++...+.
T Consensus 24 ~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 24 GIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 444 55899999999999999887654
No 272
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=73.20 E-value=3.2 Score=31.70 Aligned_cols=31 Identities=16% Similarity=0.005 Sum_probs=24.6
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCccccee
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVA 76 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 76 (234)
+..+-++.|.|.|+.+|..+|..-++.+..+
T Consensus 109 gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 109 GLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred CCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 6777789999999999999998655554444
No 273
>PF03283 PAE: Pectinacetylesterase
Probab=72.67 E-value=14 Score=28.05 Aligned_cols=44 Identities=32% Similarity=0.574 Sum_probs=28.3
Q ss_pred HHHHh-cCCCCceEEEeeChhHHHHHHHH----HhCCcccceeEEeccC
Q 026718 39 DFMAA-LPLDKKVILVGHSYGGLAVAQSM----ERFPNKISVAVFVSAL 82 (234)
Q Consensus 39 ~~l~~-~~~~~~~~lvGhS~Gg~~a~~~a----~~~p~~v~~lvl~~~~ 82 (234)
.++.. +...++++|.|.|.||.-++..+ ...|..++-.++.++.
T Consensus 146 ~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 146 DLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred HHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 34444 44568899999999999776644 3456544444555543
No 274
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=72.23 E-value=3.9 Score=30.20 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=21.6
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcc
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNK 72 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~ 72 (234)
+..+-++.|.|.|+.+|..++...++.
T Consensus 94 gl~p~~i~GsSaGAivaa~~~~~t~~E 120 (323)
T cd07231 94 QLLPRVIAGSSVGSIVCAIIATRTDEE 120 (323)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 566778999999999999988754433
No 275
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=71.66 E-value=25 Score=24.10 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=40.5
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC-C-cccceeEEe
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF-P-NKISVAVFV 79 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~-p-~~v~~lvl~ 79 (234)
.+++.++.+|-+|.. ..-.+..+.+..+++.. ....+++|=-+..+.-.+..+..+ . -.+.++|+-
T Consensus 81 ~~~~D~vlIDT~Gr~---------~~d~~~~~el~~~~~~~-~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 81 KKGYDLVLIDTAGRS---------PRDEELLEELKKLLEAL-NPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp HTTSSEEEEEE-SSS---------STHHHHHHHHHHHHHHH-SSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred hcCCCEEEEecCCcc---------hhhHHHHHHHHHHhhhc-CCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 357899999999874 23455667777777777 556666665555555444443333 2 236777754
No 276
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=70.78 E-value=9.3 Score=28.34 Aligned_cols=21 Identities=19% Similarity=0.248 Sum_probs=17.5
Q ss_pred eEEEeeChhHHHHHHHHHhCC
Q 026718 50 VILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~~~p 70 (234)
=.+.|.|+||.+|..++..++
T Consensus 34 D~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 34 DWIAGTSTGGILALALLHGKS 54 (312)
T ss_pred cEEEeeChHHHHHHHHHcCCC
Confidence 357899999999999987553
No 277
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=67.76 E-value=12 Score=26.34 Aligned_cols=22 Identities=36% Similarity=0.365 Sum_probs=18.8
Q ss_pred ceEEEeeChhHHHHHHHHHhCC
Q 026718 49 KVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 49 ~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
.-.++|-|.|+.++..++...+
T Consensus 30 ~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 30 TTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcCCC
Confidence 4579999999999999998654
No 278
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=66.93 E-value=14 Score=24.20 Aligned_cols=45 Identities=22% Similarity=0.216 Sum_probs=28.9
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhH
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGG 59 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg 59 (234)
.+-.++++|-.|. ..+-.++++.+..+...- ..+-++++|-+.|=
T Consensus 66 ~~~~~i~Ld~~Gk---------~~sS~~fA~~l~~~~~~g-~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERGK---------QLSSEEFAKKLERWMNQG-KSDIVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTSE---------E--HHHHHHHHHHHHHTT-S-EEEEEE-BTTB-
T ss_pred CCCEEEEEcCCCc---------cCChHHHHHHHHHHHhcC-CceEEEEEecCCCC
Confidence 4556888888765 367788888888877653 34557889999984
No 279
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=66.48 E-value=14 Score=24.26 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=25.0
Q ss_pred hHHHHHHHhc-CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 35 KPLIDFMAAL-PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 35 ~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+.+.++++.+ ...+++.++|-|..|...+.++...++.+..++=.+|
T Consensus 55 ~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 55 AELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 3444555444 2457899999999999888888765666666665554
No 280
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=66.07 E-value=8.8 Score=28.43 Aligned_cols=22 Identities=23% Similarity=0.234 Sum_probs=18.9
Q ss_pred CCCceEEEeeChhHHHHHHHHH
Q 026718 46 LDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
+.++.++.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999998887765
No 281
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=65.86 E-value=19 Score=26.76 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=22.4
Q ss_pred HHhcCCCCceEEEeeChhHHHHHHHHHh
Q 026718 41 MAALPLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 41 l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
+.+....+.|+++|+|-|+++|-.+|..
T Consensus 115 ~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 115 IFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 3444577899999999999998888763
No 282
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=65.23 E-value=9.8 Score=30.84 Aligned_cols=34 Identities=26% Similarity=0.133 Sum_probs=25.5
Q ss_pred eEEEeeChhHHHHHHHHHhCC-cccceeEEeccCC
Q 026718 50 VILVGHSYGGLAVAQSMERFP-NKISVAVFVSALK 83 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~ 83 (234)
++.-+.|=||..++..|.+.- ..|.+++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 555678889998888887653 4688888777754
No 283
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=64.89 E-value=8.3 Score=19.14 Aligned_cols=34 Identities=9% Similarity=0.027 Sum_probs=23.9
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHh
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAA 43 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~ 43 (234)
..+|.+..+|+||.-.. ..|+++..+.+.+.+..
T Consensus 11 ~~~y~~~~pdlpg~~t~------G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFTQ------GDTLEEALENAKEALEL 44 (48)
T ss_dssp SSSEEEEETTCCTCEEE------ESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhhc------CCCHHHHHHHHHHHHHH
Confidence 46799999999987411 24677777777766653
No 284
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=64.73 E-value=13 Score=27.41 Aligned_cols=28 Identities=14% Similarity=0.079 Sum_probs=22.2
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCccc
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKI 73 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 73 (234)
+..+-++.|.|.|+.+|..++....+.+
T Consensus 95 ~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 95 DLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred CCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 5566789999999999999987654444
No 285
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=63.07 E-value=23 Score=28.81 Aligned_cols=49 Identities=14% Similarity=0.222 Sum_probs=31.7
Q ss_pred hhhHHHHHHHhc-CCCCceEEEee------ChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 33 FFKPLIDFMAAL-PLDKKVILVGH------SYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 33 ~~~~l~~~l~~~-~~~~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
-++.+...+..+ ...++|+++|| +.|+.+++..-+..-++ .+.+.++|.
T Consensus 322 RaRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 322 RARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 334444333332 34689999999 78999988866654343 567777764
No 286
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=62.90 E-value=31 Score=22.58 Aligned_cols=50 Identities=18% Similarity=0.187 Sum_probs=30.6
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHH
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQS 65 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~ 65 (234)
.|-.|++.|.+|-- .+-+++++.+..+-+. +.+=.+++|-|.|=.-++.-
T Consensus 66 ~~~~vi~Ld~~Gk~---------~sSe~fA~~l~~~~~~--G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 66 KGSYVVLLDIRGKA---------LSSEEFADFLERLRDD--GRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCCeEEEEecCCCc---------CChHHHHHHHHHHHhc--CCeEEEEEeCcccCCHHHHH
Confidence 35578888887652 4566666666554432 43446678888885544443
No 287
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=62.04 E-value=18 Score=25.74 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=18.3
Q ss_pred eEEEeeChhHHHHHHHHHhCC
Q 026718 50 VILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~~~p 70 (234)
-.++|-|.|+.++..++...+
T Consensus 33 ~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 389999999999999998654
No 288
>PRK12467 peptide synthase; Provisional
Probab=60.15 E-value=54 Score=34.14 Aligned_cols=75 Identities=12% Similarity=-0.003 Sum_probs=48.9
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh---CCcccceeEEeccC
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMER---FPNKISVAVFVSAL 82 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~ 82 (234)
+..++.+..++.-.... ...+++.++....+.+.......+..+.|+|+||.++..++.. ..+.+.-+.+++..
T Consensus 3718 ~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3718 DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEEecc
Confidence 34566666554422221 1246777777777777776566789999999999999988764 34556666666544
Q ss_pred C
Q 026718 83 K 83 (234)
Q Consensus 83 ~ 83 (234)
.
T Consensus 3795 ~ 3795 (3956)
T PRK12467 3795 L 3795 (3956)
T ss_pred c
Confidence 3
No 289
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=59.54 E-value=66 Score=23.45 Aligned_cols=65 Identities=17% Similarity=0.215 Sum_probs=40.0
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEE-EeeChhHHHHHHHHHhCC-cccceeEEe
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVIL-VGHSYGGLAVAQSMERFP-NKISVAVFV 79 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l-vGhS~Gg~~a~~~a~~~p-~~v~~lvl~ 79 (234)
.++.++.+|-+|....+ .+..+.+.++++.. ....++| +.-++++.-+...+..+. -.+.++|+-
T Consensus 153 ~~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~-~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 153 ARVDYILIDTAGKNYRA---------SETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCCEEEEECCCCCcCC---------HHHHHHHHHHHhhh-CCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 46899999999884321 33444455566555 3334555 445677877777777653 346666654
No 290
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=59.33 E-value=51 Score=22.02 Aligned_cols=53 Identities=19% Similarity=0.269 Sum_probs=32.8
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChh
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYG 58 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~G 58 (234)
|.+.|++.+.+|.=+.=-.... ..-..++.+.+.++.+.. +.+++.++..|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~---~~i~~~~~~~~~~l~~~~-~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE---DEIPPEYAEWLNELKKQF-GKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc---CcCCHHHHHHHHHHHHHC-CCCeEEEEECCCC
Confidence 6788999999999655211111 112334444455555444 5568999999986
No 291
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=58.19 E-value=22 Score=25.40 Aligned_cols=21 Identities=29% Similarity=0.351 Sum_probs=17.8
Q ss_pred eEEEeeChhHHHHHHHHHhCC
Q 026718 50 VILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~~~p 70 (234)
-.+.|-|.|+.+|..++...+
T Consensus 32 d~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 32 NKISGASAGALAACCLLCDLP 52 (245)
T ss_pred CeEEEEcHHHHHHHHHHhCCc
Confidence 349999999999999988654
No 292
>PRK14974 cell division protein FtsY; Provisional
Probab=57.77 E-value=57 Score=24.69 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=38.2
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCC--cccceeEEe
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFP--NKISVAVFV 79 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~ 79 (234)
.+|+.++.+|-+|... +-.++.+.+..+.+.. ....+++|.-+.-|.-+..-+..+. -.+.++|+-
T Consensus 220 ~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~-~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 220 ARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVT-KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred hCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhh-CCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 3567888888887643 2234445555555555 4556667766666665555554432 235666654
No 293
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=57.28 E-value=24 Score=25.68 Aligned_cols=82 Identities=13% Similarity=0.069 Sum_probs=37.8
Q ss_pred CCCceEEe------ecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhH----HHHHHHHHhCCccc
Q 026718 4 SSGHNVTA------FDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGG----LAVAQSMERFPNKI 73 (234)
Q Consensus 4 ~~g~~vi~------~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg----~~a~~~a~~~p~~v 73 (234)
..|++|.+ ..++|||...+.......+.++.+++.+ ++.+ ..=..++-|+=-.+ .++-.+..-....-
T Consensus 26 ~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~-~~~~-~~~davltGYlgs~~qv~~i~~~v~~vk~~~P 103 (281)
T COG2240 26 RLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEA-IDKL-GECDAVLTGYLGSAEQVRAIAGIVKAVKEANP 103 (281)
T ss_pred HcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHh-cccc-cccCEEEEccCCCHHHHHHHHHHHHHHhccCC
Confidence 34555544 4688999865433222223333333222 0011 22345666642222 22222222222234
Q ss_pred ceeEEeccCCCCCC
Q 026718 74 SVAVFVSALKPGPD 87 (234)
Q Consensus 74 ~~lvl~~~~~~~~~ 87 (234)
+.+++++|.....+
T Consensus 104 ~~~~l~DPVMGD~g 117 (281)
T COG2240 104 NALYLCDPVMGDPG 117 (281)
T ss_pred CeEEEeCCcccCCC
Confidence 57799999876554
No 294
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=57.26 E-value=43 Score=22.06 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=13.5
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChh
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYG 58 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~G 58 (234)
.+-.++++.+..+...- ..+-++++|-+.|
T Consensus 80 ~sS~~fA~~l~~~~~~g-~~~i~F~IGGa~G 109 (157)
T PRK00103 80 LSSEEFAQELERWRDDG-RSDVAFVIGGADG 109 (157)
T ss_pred CCHHHHHHHHHHHHhcC-CccEEEEEcCccc
Confidence 34455555555443221 1234455555554
No 295
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=56.98 E-value=24 Score=25.30 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=18.7
Q ss_pred ceEEEeeChhHHHHHHHHHhCC
Q 026718 49 KVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 49 ~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
.-.++|.|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 4579999999999999987655
No 296
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=56.92 E-value=44 Score=26.26 Aligned_cols=65 Identities=12% Similarity=0.264 Sum_probs=42.2
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc--ccceeEEe
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN--KISVAVFV 79 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~ 79 (234)
.+|.++.+|-+|.-. .-+.+.+.+..+.+.. ....+++|--++-|.-+...+..+-+ .+.++|+-
T Consensus 181 ~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~-~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 181 ENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAI-QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCCEEEEECCCCCc---------chHHHHHHHHHHhhhc-CCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 589999999998532 2234555566666655 55667888777777666666665532 35666654
No 297
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=55.75 E-value=12 Score=28.31 Aligned_cols=19 Identities=21% Similarity=0.186 Sum_probs=16.2
Q ss_pred EEEeeChhHHHHHHHHHhC
Q 026718 51 ILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 51 ~lvGhS~Gg~~a~~~a~~~ 69 (234)
.+.|.|.||.+|..++..+
T Consensus 44 lIaGTStGgIIAa~la~g~ 62 (344)
T cd07217 44 FVGGTSTGSIIAACIALGM 62 (344)
T ss_pred EEEEecHHHHHHHHHHcCC
Confidence 6789999999999998643
No 298
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=55.48 E-value=26 Score=25.13 Aligned_cols=22 Identities=18% Similarity=0.163 Sum_probs=18.5
Q ss_pred ceEEEeeChhHHHHHHHHHhCC
Q 026718 49 KVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 49 ~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
.-.++|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 4568999999999999988654
No 299
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=55.27 E-value=28 Score=22.66 Aligned_cols=19 Identities=26% Similarity=0.179 Sum_probs=16.8
Q ss_pred CceEEEeeChhHHHHHHHH
Q 026718 48 KKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~~a 66 (234)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 5667889999999999988
No 300
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=55.17 E-value=77 Score=24.97 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=49.9
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcc--cceeEEec
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNK--ISVAVFVS 80 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~ 80 (234)
..+|.|+.+|-.|.= .-=+++.+.+.++-+.+ ....+.+|--+|=|.-|...|..+-+. +.++|+--
T Consensus 180 ~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~-~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 180 EEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVI-NPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred HcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhc-CCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 457889999987652 12345666777777777 788899999999999999999887654 67777653
No 301
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=54.57 E-value=38 Score=19.13 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=26.2
Q ss_pred hhhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 30 ISDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
....+++-.+.++.. .+.+++.++|-|-|=.+|...+..+.
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 344444444444442 35688999999999999988877653
No 302
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=52.29 E-value=56 Score=25.39 Aligned_cols=78 Identities=19% Similarity=0.203 Sum_probs=49.3
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC---------CC-------------CchhhhhhHHHHHHHhc---CCCCceEEEeeC
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH---------NL-------------RSISDFFKPLIDFMAAL---PLDKKVILVGHS 56 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~---------~~-------------~~~~~~~~~l~~~l~~~---~~~~~~~lvGhS 56 (234)
+.+.|.+|+.+|.-=.|.+..+.. .. ..++.+++-+..++..+ +..+-++-+|-|
T Consensus 24 i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i~Gvi~~GGs 103 (403)
T PF06792_consen 24 IEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKIDGVIGIGGS 103 (403)
T ss_pred HHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecCC
Confidence 346788999999744443322211 00 12333444555566655 235678889999
Q ss_pred hhHHHHHHHHHhCCcccceeEEe
Q 026718 57 YGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 57 ~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
.|..++.......|--+-+++.-
T Consensus 104 ~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 104 GGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred ccHHHHHHHHHhCCCCCCeEEEE
Confidence 99999999998888666666643
No 303
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=52.07 E-value=23 Score=28.25 Aligned_cols=53 Identities=15% Similarity=0.265 Sum_probs=32.5
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCce-----EEEeeChhHHHHHHHHHhC
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKV-----ILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-----~lvGhS~Gg~~a~~~a~~~ 69 (234)
.+|.+|+.+|=-|.- .+ .+-.+..-|.++ ..+++ .++|.|.||++|..+...+
T Consensus 414 g~G~rILSiDGGGtr----------G~--~~lqiL~kiekl-sgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 414 GQGLRILSIDGGGTR----------GL--ATLQILKKIEKL-SGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCceEEEEecCCCcc----------ch--hHHHHHHHHHHh-cCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 467788887753320 11 122333445555 45665 3789999999999887654
No 304
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=51.87 E-value=38 Score=22.15 Aligned_cols=12 Identities=8% Similarity=0.221 Sum_probs=5.1
Q ss_pred chhhhhhHHHHH
Q 026718 29 SISDFFKPLIDF 40 (234)
Q Consensus 29 ~~~~~~~~l~~~ 40 (234)
+-.++++.+..+
T Consensus 79 sS~~fA~~l~~~ 90 (153)
T TIGR00246 79 TTPQLADTLEKW 90 (153)
T ss_pred CHHHHHHHHHHH
Confidence 344444444443
No 305
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=51.71 E-value=14 Score=27.00 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=17.1
Q ss_pred eEEEeeChhHHHHHHHHHhC
Q 026718 50 VILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~~~ 69 (234)
-.++|.|.||.+|+.++..+
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 36889999999999998754
No 306
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=51.61 E-value=14 Score=27.39 Aligned_cols=17 Identities=18% Similarity=0.071 Sum_probs=15.2
Q ss_pred EEEeeChhHHHHHHHHH
Q 026718 51 ILVGHSYGGLAVAQSME 67 (234)
Q Consensus 51 ~lvGhS~Gg~~a~~~a~ 67 (234)
.++|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 57899999999999875
No 307
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=50.89 E-value=31 Score=24.64 Aligned_cols=18 Identities=28% Similarity=0.307 Sum_probs=16.0
Q ss_pred eEEEeeChhHHHHHHHHH
Q 026718 50 VILVGHSYGGLAVAQSME 67 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~ 67 (234)
-.+.|.|.|+.++..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 479999999999999984
No 308
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=50.29 E-value=65 Score=23.69 Aligned_cols=46 Identities=15% Similarity=0.195 Sum_probs=29.7
Q ss_pred hhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEe
Q 026718 33 FFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFV 79 (234)
Q Consensus 33 ~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 79 (234)
...-+..+++++ .+..++-=+|..|||+ +..+|.+|..+|.++.+.
T Consensus 57 Q~~k~~~~~~kl~L~~G~~lLDiGCGWG~l-~~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 57 QRAKLDLILEKLGLKPGMTLLDIGCGWGGL-AIYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCChhHH-HHHHHHHcCCEEEEeeCC
Confidence 334455566665 3455677799999998 455666776666666543
No 309
>PRK04148 hypothetical protein; Provisional
Probab=50.21 E-value=39 Score=21.57 Aligned_cols=31 Identities=13% Similarity=0.121 Sum_probs=21.7
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
...++..+|-..|..+|..++.. . ..++.++
T Consensus 16 ~~~kileIG~GfG~~vA~~L~~~-G---~~ViaID 46 (134)
T PRK04148 16 KNKKIVELGIGFYFKVAKKLKES-G---FDVIVID 46 (134)
T ss_pred cCCEEEEEEecCCHHHHHHHHHC-C---CEEEEEE
Confidence 34679999999888788887753 1 2455555
No 310
>PF15566 Imm18: Immunity protein 18
Probab=49.46 E-value=26 Score=17.99 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=23.6
Q ss_pred hhhhhhHHHHHHHhcCCCCceEEEeeChhHH
Q 026718 30 ISDFFKPLIDFMAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~ 60 (234)
+.-++++|..+.... ..+.++++--||||.
T Consensus 4 L~~L~~~l~~L~~~~-~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKE-PFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhcc-CCCCceecccccccc
Confidence 455667777777766 678899999999996
No 311
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=49.30 E-value=21 Score=17.97 Aligned_cols=26 Identities=8% Similarity=0.169 Sum_probs=22.6
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEe
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVG 54 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvG 54 (234)
++.+.+-.|+...|..+ .+..+.++|
T Consensus 6 w~PqSWM~DLrS~I~~~-~I~ql~ipG 31 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEM-AITQLFIPG 31 (51)
T ss_pred cCcHHHHHHHHHHHhcc-eeeeEEecc
Confidence 56788999999999998 888888887
No 312
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=49.19 E-value=15 Score=28.76 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=24.7
Q ss_pred ccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeec
Q 026718 174 VRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMS 217 (234)
Q Consensus 174 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 217 (234)
..+++..|+.|++....... ..-.....++++|++|+.-+-
T Consensus 377 tnviFtNG~~DPW~~lgv~~---~~~~~~~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTS---DSSDSVPAIVIPGGAHCSDLY 417 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGGS
T ss_pred CeEEeeCCCCCCcccccCCC---CCCCCcccEEECCCeeecccc
Confidence 47999999999997665222 122344567899999986653
No 313
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=49.13 E-value=41 Score=17.94 Aligned_cols=34 Identities=12% Similarity=0.223 Sum_probs=26.4
Q ss_pred hCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 198 RNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 198 ~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
..|+ .++.+-++.++.-.|.++++.+.|.+|-++
T Consensus 24 ~~PD-TvItL~~G~k~vV~Es~~eVi~ki~~y~~~ 57 (60)
T PF06289_consen 24 ETPD-TVITLTNGKKYVVKESVEEVIEKIIEYRRK 57 (60)
T ss_pred EcCC-eEEEEeCCCEEEEECCHHHHHHHHHHHHHh
Confidence 3466 556666578888889999999999998754
No 314
>PF01341 Glyco_hydro_6: Glycosyl hydrolases family 6; InterPro: IPR016288 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The 1,4-beta cellobiohydrolase family plays a central role in the recycling of plant biomass. The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes: Endoglucanases, which cut internal beta-1,4-glucosidic bonds; Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing end of the cellulose polymer chain; and Beta-1,4-glucosidases, which hydrolyze the cellobiose and other short cello-oligosaccharides to glucose.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0030245 cellulose catabolic process; PDB: 2BOF_X 2BOG_X 1TML_A 3RPT_A 2BOD_X 2BOE_X 1DYS_B 3VOI_A 3VOG_A 3VOJ_A ....
Probab=48.53 E-value=32 Score=25.43 Aligned_cols=45 Identities=11% Similarity=0.321 Sum_probs=25.5
Q ss_pred eEEeecCCCCCC----CCC-CCCCCCchhhhhhHHHHHHHhcCCCCceEEE
Q 026718 8 NVTAFDLAASGV----EPQ-QVHNLRSISDFFKPLIDFMAALPLDKKVILV 53 (234)
Q Consensus 8 ~vi~~D~~G~G~----S~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv 53 (234)
-++++++|+..- |.+ ......+++++++.+.+.|+++ +..++++|
T Consensus 64 vlVvY~lP~RDC~a~~S~Geg~~~~~~Yk~wId~ia~~i~~~-g~~~~vvI 113 (298)
T PF01341_consen 64 VLVVYNLPNRDCAAGASAGEGADSLASYKEWIDPIAAGIKKY-GDRRAVVI 113 (298)
T ss_dssp EEEE---TTCSTTSSSTSSSGGTHHHHHHHHHHHHHHHHHHT-TTSEEEEE
T ss_pred EEEEeccCCCCccccccCCCCCCchhHHHHHHHHHHHHHHhc-CCCceEEE
Confidence 467788887643 333 2222346677888888888777 55665544
No 315
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=48.51 E-value=85 Score=22.94 Aligned_cols=51 Identities=12% Similarity=0.048 Sum_probs=33.5
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccC-CCccee-ecChHHHHHHHHHH
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKD-SDHMVM-MSKPLELWAHLLSI 229 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~p~~~~~~i~~f 229 (234)
.+|+.++.|++ ...++..+.+|+++.+.++. -|++.- .-.|++..+.|++=
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~a 199 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREA 199 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHH
Confidence 89999999976 33456666779888877763 354333 34566666655543
No 316
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=47.85 E-value=17 Score=27.41 Aligned_cols=19 Identities=16% Similarity=0.083 Sum_probs=15.2
Q ss_pred eEEEeeChhHHHHHHHHHh
Q 026718 50 VILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~~ 68 (234)
-.++|||+|=+.|+..+..
T Consensus 126 ~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred CeeeeccHHHHHHHHHhCC
Confidence 4679999999988877643
No 317
>PF15660 Imm49: Immunity protein 49
Probab=47.82 E-value=26 Score=18.60 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=16.2
Q ss_pred CCchhhhhhHHHHHHHhc
Q 026718 27 LRSISDFFKPLIDFMAAL 44 (234)
Q Consensus 27 ~~~~~~~~~~l~~~l~~~ 44 (234)
.|.+.++.+|+.++++.+
T Consensus 63 lyrlrdwtddladwvdrl 80 (84)
T PF15660_consen 63 LYRLRDWTDDLADWVDRL 80 (84)
T ss_pred hhhhhhhhhHHHHHHHHH
Confidence 578999999999999987
No 318
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=47.74 E-value=84 Score=23.13 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=24.7
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+.++|.++|-..||. ++.+.+|+. +.+++++.-
T Consensus 76 ~pk~VLiiGgGdG~t--lRevlkh~~-ve~i~~VEI 108 (282)
T COG0421 76 NPKRVLIIGGGDGGT--LREVLKHLP-VERITMVEI 108 (282)
T ss_pred CCCeEEEECCCccHH--HHHHHhcCC-cceEEEEEc
Confidence 446899999999996 555667765 777877763
No 319
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=47.57 E-value=46 Score=23.57 Aligned_cols=58 Identities=17% Similarity=0.158 Sum_probs=34.0
Q ss_pred eEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc-CCCCceE--EEeeChhHH-HHHHHHH
Q 026718 8 NVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL-PLDKKVI--LVGHSYGGL-AVAQSME 67 (234)
Q Consensus 8 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~--lvGhS~Gg~-~a~~~a~ 67 (234)
-|..+|-+|...+.+.. ...+......+...+... ....|++ ++|++|+|. ++.-+.+
T Consensus 67 Iv~lVD~~sQa~grreE--llGi~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA 128 (234)
T PF06833_consen 67 IVALVDVPSQAYGRREE--LLGINQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQA 128 (234)
T ss_pred EEEEEeCCccccchHHH--HhhHHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHh
Confidence 36678988887665433 245555555444444332 2345553 789999886 5555544
No 320
>PLN00179 acyl- [acyl-carrier protein] desaturase
Probab=46.70 E-value=38 Score=25.85 Aligned_cols=62 Identities=13% Similarity=0.119 Sum_probs=46.9
Q ss_pred ecCCCCCCCCCCCC-------------CCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCccccee
Q 026718 12 FDLAASGVEPQQVH-------------NLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVA 76 (234)
Q Consensus 12 ~D~~G~G~S~~~~~-------------~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 76 (234)
+.+||++..++... ..|+..++++-+..+++.. +..+. -|-|-=|--|..+...+|.++.++
T Consensus 288 i~MPa~~m~dg~d~~lF~~fsavaqr~GVYt~~dy~dIl~~lv~~W-~v~~l--~gLs~eg~kArd~l~~l~~rirr~ 362 (390)
T PLN00179 288 ITMPAHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEHLVRRW-KVEEL--TGLSGEGRRAQDYVCGLPPRIRRL 362 (390)
T ss_pred CCCCcccCCCCCcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhc-CcCcc--cCCCHHHHHHHHHHHHhHHHHHHH
Confidence 67889887764321 4688999996677777776 55555 588888999999999888887765
No 321
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=46.01 E-value=29 Score=23.05 Aligned_cols=23 Identities=22% Similarity=0.163 Sum_probs=18.1
Q ss_pred CCCceEEEeeChhHHHHHHHHHh
Q 026718 46 LDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
....-.+.|.|.||.+|+.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 45566799999999999888765
No 322
>cd01406 SIR2-like Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.
Probab=45.87 E-value=28 Score=24.67 Aligned_cols=50 Identities=14% Similarity=0.115 Sum_probs=28.5
Q ss_pred CCCCCCCCCCCCchhhhhh------HHHHHHHhcCCCCceEEEeeChhHHHHHHHH
Q 026718 17 SGVEPQQVHNLRSISDFFK------PLIDFMAALPLDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 17 ~G~S~~~~~~~~~~~~~~~------~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 66 (234)
||....+.....+-+++.+ .+..+++.+-....+.++|.|+.=.-...+.
T Consensus 143 HG~~~~~~~~VlT~~dY~~~~~~~~~~~~~l~~ll~~~~~LFiG~S~~D~~i~~ll 198 (242)
T cd01406 143 HGDVDDDESIVLTKSDYERYYLKNGWATKFLKSDLEKYTVLFIGYSLTDPNIRYLL 198 (242)
T ss_pred ecccCCCCceEecHHHHHHHHhccHHHHHHHHHHHhcCcEEEEEcCCCCCcHHHHH
Confidence 4544444333345555544 3344555542457899999998876444443
No 323
>PRK13938 phosphoheptose isomerase; Provisional
Probab=45.80 E-value=70 Score=22.00 Aligned_cols=27 Identities=7% Similarity=0.140 Sum_probs=23.2
Q ss_pred cCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 44 LPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 44 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+...++++++|..-.|.+|..++.+..
T Consensus 42 l~~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 42 YRAGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHCCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 346789999999999999999998763
No 324
>PRK06193 hypothetical protein; Provisional
Probab=45.06 E-value=41 Score=23.30 Aligned_cols=52 Identities=17% Similarity=0.207 Sum_probs=31.4
Q ss_pred CchhhhhhHHHHHHHhcC-CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 28 RSISDFFKPLIDFMAALP-LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.+.+.+.+++..+|+.+. ..+++.+|||..+= ..++...++.....+++.+.
T Consensus 135 ~~~~~y~~~l~~~I~~l~~~~~~vLlVgHnp~i---~~l~g~~~~~~g~~~~~~~~ 187 (206)
T PRK06193 135 ERNALLKAGLRPLLTTPPDPGTNTVLVGHDDNL---EAATGIYPEPEGEAAVFEPL 187 (206)
T ss_pred hhHHHHHHHHHHHHhhCCCCCCeEEEEeCchHH---HHHhCCCCccCccEEEEEeC
Confidence 355666788889998873 45679999999532 22222333323345555553
No 325
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=45.04 E-value=60 Score=23.42 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=25.5
Q ss_pred hHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 35 KPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
+.+..+.+.+...++++++|..-.|.++...|...+.
T Consensus 37 ~av~~~~~~l~~ggrl~~~GaGtSg~la~~da~e~~~ 73 (257)
T cd05007 37 RAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASELPP 73 (257)
T ss_pred HHHHHHHHHHHcCCEEEEEcCcHHHHHHHHHHHhccc
Confidence 3333444444466899999999999999776665543
No 326
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=44.56 E-value=97 Score=24.09 Aligned_cols=51 Identities=20% Similarity=0.190 Sum_probs=28.7
Q ss_pred CCCCCceEEeecCCC--CCCCCCCCCCCCchhhhhhHHHHHHHh---cCCCCceEEEee
Q 026718 2 IKSSGHNVTAFDLAA--SGVEPQQVHNLRSISDFFKPLIDFMAA---LPLDKKVILVGH 55 (234)
Q Consensus 2 l~~~g~~vi~~D~~G--~G~S~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~lvGh 55 (234)
|.+.|+.|+-+..-- +|..... ...+.++.++.+...+.. + ..+++.+.|-
T Consensus 138 L~~~G~~vv~P~~g~~ac~~~g~g--~~~~~~~i~~~v~~~~~~~~~~-~~~~vlit~g 193 (390)
T TIGR00521 138 LKDDGYIFIEPDSGLLACGDEGKG--RLAEPETIVKAAEREFSPKEDL-EGKRVLITAG 193 (390)
T ss_pred HHHCCcEEECCCCcccccccccCC--CCCCHHHHHHHHHHHHhhcccc-CCceEEEecC
Confidence 345577666555321 2333222 235788888888777754 4 4566666665
No 327
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=44.44 E-value=30 Score=25.83 Aligned_cols=58 Identities=16% Similarity=0.040 Sum_probs=40.6
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhC-----------------------------CCCcEEEccCCCcceeecChHHHH
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRN-----------------------------PPHQVEEIKDSDHMVMMSKPLELW 223 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~gH~~~~~~p~~~~ 223 (234)
.+.|.+-.|..|-++.....+...+++ .+..+..++.+||+...++|+...
T Consensus 325 Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilraghmvp~Dnp~~a~ 404 (414)
T KOG1283|consen 325 GVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGHMVPADNPAAAS 404 (414)
T ss_pred CceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccCcccCCCHHHHh
Confidence 467888889998887655444433332 344566777899999999999877
Q ss_pred HHHHHHh
Q 026718 224 AHLLSIA 230 (234)
Q Consensus 224 ~~i~~fl 230 (234)
..++.+-
T Consensus 405 hmlr~vt 411 (414)
T KOG1283|consen 405 HMLRHVT 411 (414)
T ss_pred hheeecc
Confidence 6665443
No 328
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=44.16 E-value=36 Score=28.85 Aligned_cols=22 Identities=18% Similarity=0.148 Sum_probs=18.3
Q ss_pred CCCceEEEeeChhHHHHHHHHH
Q 026718 46 LDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
+..--++.|.|+||..+..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4556688999999999888886
No 329
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=43.46 E-value=65 Score=23.90 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=23.6
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+..+.+.+...++++++|..-.|.++...+...+
T Consensus 52 v~~~~~~l~~ggrI~~~GaGtSg~la~~da~e~~ 85 (299)
T PRK05441 52 VDAAAAALRQGGRLIYIGAGTSGRLGVLDASECP 85 (299)
T ss_pred HHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhCc
Confidence 3334444446688999999999999966665443
No 330
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=43.31 E-value=76 Score=22.09 Aligned_cols=25 Identities=16% Similarity=0.086 Sum_probs=15.3
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHH
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAV 62 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a 62 (234)
+.+.++.. +.-..+++-||+||...
T Consensus 114 ir~~~e~~-d~~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 114 IRKEIEKC-DSLDGFFIVHSLGGGTG 138 (216)
T ss_dssp HHHHHHTS-TTESEEEEEEESSSSHH
T ss_pred cchhhccc-cccccceecccccceec
Confidence 34444333 45567888888888743
No 331
>PRK05665 amidotransferase; Provisional
Probab=43.17 E-value=50 Score=23.54 Aligned_cols=38 Identities=16% Similarity=0.312 Sum_probs=26.0
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHH
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 66 (234)
+.-..+...+.++|+.. -...+=++|.|+|..+.....
T Consensus 71 ~~~~pwi~~l~~~i~~~-~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 71 FGTDPWIQTLKTYLLKL-YERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred cccchHHHHHHHHHHHH-HhcCCCEEEEeHHHHHHHHHh
Confidence 44456777777888766 333455899999998665544
No 332
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=42.84 E-value=18 Score=26.78 Aligned_cols=17 Identities=29% Similarity=0.362 Sum_probs=14.9
Q ss_pred EEEeeChhHHHHHHHHH
Q 026718 51 ILVGHSYGGLAVAQSME 67 (234)
Q Consensus 51 ~lvGhS~Gg~~a~~~a~ 67 (234)
.++|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 67899999999998863
No 333
>PF03405 FA_desaturase_2: Fatty acid desaturase; InterPro: IPR005067 Fatty acid desaturases are enzymes that catalyze the insertion of a double bond at the delta position of fatty acids. There seem to be two distinct families of fatty acid desaturases which do not seem to be evolutionary related. Family 1 is composed of: - Stearoyl-CoA desaturase (SCD) (1.14.19.1 from EC) []. Family 2 is composed of: - Bacterial fatty acid desaturases. - Plant stearoyl-acyl-carrier-protein desaturase (1.14.19.1 from EC) [], this enzyme catalyzes the introduction of a double bond at the delta(9) position of steraoyl-ACP to produce oleoyl-ACP. This enzyme is responsible for the conversion of saturated fatty acids to unsaturated fatty acids in the synthesis of vegetable oils. - Cyanobacterial DesA [], an enzyme that can introduce a second cis double bond at the delta(12) position of fatty acid bound to membranes glycerolipids. DesA is involved in chilling tolerance; the phase transition temperature of lipids of cellular membranes being dependent on the degree of unsaturation of fatty acids of the membrane lipids. This entry contains fatty acid desaturases belonging to Family 2. ; GO: 0045300 acyl-[acyl-carrier-protein] desaturase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 1OQ7_B 1AFR_A 2XZ0_B 1OQB_A 2J2F_E 1OQ4_B 1OQ9_A 2XZ1_A 1ZA0_A.
Probab=42.74 E-value=26 Score=26.26 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=37.8
Q ss_pred ecCCCCCCCCCCC-------------CCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCccccee
Q 026718 12 FDLAASGVEPQQV-------------HNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVA 76 (234)
Q Consensus 12 ~D~~G~G~S~~~~-------------~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 76 (234)
+.+||++..++.. ...|+..++.+-+..+++.. +...+. |-|-.|--|..+....|.++.++
T Consensus 231 f~MPg~~m~dg~d~~lF~~~~a~~a~~GvY~~~dy~dI~~~l~~~W-~i~~~~--gL~~eg~~Ard~l~~l~~r~~r~ 305 (330)
T PF03405_consen 231 FRMPGHLMPDGRDPDLFERFSAVAARAGVYTPRDYADILEPLLRRW-KIESRT--GLSGEGEKARDYLCALPARLRRF 305 (330)
T ss_dssp ---TTTT---SS-TTHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHT-TGGG----S--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchhcccCcchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh-ccCccc--CCChHHHHHHHHHHhhHHHHHHH
Confidence 6788887665322 14688999998677788888 666655 88888888888888777776655
No 334
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=42.74 E-value=1e+02 Score=21.50 Aligned_cols=47 Identities=23% Similarity=0.269 Sum_probs=32.3
Q ss_pred hhhhhHHHHHHHhcCCCCceEEEeeChhHH-HHHHHHHhCCcccceeE
Q 026718 31 SDFFKPLIDFMAALPLDKKVILVGHSYGGL-AVAQSMERFPNKISVAV 77 (234)
Q Consensus 31 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~-~a~~~a~~~p~~v~~lv 77 (234)
.+--+-+...|..+.+.+++++.|-+.||. ++.+.|....-...-++
T Consensus 8 ~dAGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvli 55 (220)
T COG1926 8 TDAGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLI 55 (220)
T ss_pred HHHHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEE
Confidence 344445666666663368899999999997 88888887654444443
No 335
>PRK07877 hypothetical protein; Provisional
Probab=42.61 E-value=52 Score=27.92 Aligned_cols=34 Identities=12% Similarity=-0.013 Sum_probs=26.7
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
...+|.++|-+.|+.++..+|.. .-+..+++++.
T Consensus 106 ~~~~V~IvG~GlGs~~a~~Lara--GvvG~l~lvD~ 139 (722)
T PRK07877 106 GRLRIGVVGLSVGHAIAHTLAAE--GLCGELRLADF 139 (722)
T ss_pred hcCCEEEEEecHHHHHHHHHHHc--cCCCeEEEEcC
Confidence 67899999999999988888763 11478888885
No 336
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=42.27 E-value=1e+02 Score=20.42 Aligned_cols=59 Identities=7% Similarity=-0.085 Sum_probs=42.9
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
+.-++++..--|.-.+....+++.+.+.+.++..|--+|..+.-+....+.+.+..++.
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~ 97 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLP 97 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhc
Confidence 44677777777777777777888888888888888767776655566666666666654
No 337
>COG3621 Patatin [General function prediction only]
Probab=42.09 E-value=92 Score=23.55 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=25.1
Q ss_pred hhhhHHHHHHHhcCC---CCceE-EEeeChhHHHHHHHHHhCC
Q 026718 32 DFFKPLIDFMAALPL---DKKVI-LVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 32 ~~~~~l~~~l~~~~~---~~~~~-lvGhS~Gg~~a~~~a~~~p 70 (234)
.....+...|++..+ .+.+. +-|.|.||.+++.+|...+
T Consensus 22 ~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 22 AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 445556666666512 12344 4589999999999887543
No 338
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=41.89 E-value=23 Score=17.21 Aligned_cols=13 Identities=23% Similarity=0.233 Sum_probs=10.0
Q ss_pred eEEeecCCCCCCC
Q 026718 8 NVTAFDLAASGVE 20 (234)
Q Consensus 8 ~vi~~D~~G~G~S 20 (234)
.+-+-|+||+|.-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 4667899999864
No 339
>COG0069 GltB Glutamate synthase domain 2 [Amino acid transport and metabolism]
Probab=41.79 E-value=1.9e+02 Score=23.38 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=39.3
Q ss_pred CCCCC-CCCCCCCCCchhhhhhHHHHHHHhcCCCCceE--EEeeChhHHHHHHHHHhCCcccceeEEeccCCCCCCcch
Q 026718 15 AASGV-EPQQVHNLRSISDFFKPLIDFMAALPLDKKVI--LVGHSYGGLAVAQSMERFPNKISVAVFVSALKPGPDLNI 90 (234)
Q Consensus 15 ~G~G~-S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 90 (234)
||-|. |+.+..+.|+++|+++-|.++-+.- +..+|. ++...-=+.++.-.|..++| +|.+++.-...+.++
T Consensus 271 pG~~~ISP~pHHDiysieDLaqlI~dLk~~~-~~~~I~VKlva~~~v~~iaagvakA~AD----~I~IdG~~GGTGAsP 344 (485)
T COG0069 271 PGVGLISPPPHHDIYSIEDLAQLIKDLKEAN-PWAKISVKLVAEHGVGTIAAGVAKAGAD----VITIDGADGGTGASP 344 (485)
T ss_pred CCCCCcCCCCcccccCHHHHHHHHHHHHhcC-CCCeEEEEEecccchHHHHhhhhhccCC----EEEEcCCCCcCCCCc
Confidence 45553 3344556789999888777755443 455543 33333333445545555554 566776554444443
No 340
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=41.66 E-value=33 Score=33.82 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=21.4
Q ss_pred HHHHhcCCCCceEEEeeChhHHHHHHHH
Q 026718 39 DFMAALPLDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 66 (234)
++++.. +.++-.++|||+|=+.|+.++
T Consensus 666 ~lL~~~-Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 666 KLFTQA-GFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHc-CCccceeecCCHHHHHHHHHh
Confidence 344555 788999999999999888765
No 341
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=41.64 E-value=71 Score=23.83 Aligned_cols=79 Identities=20% Similarity=0.210 Sum_probs=44.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCC--CCCchhhhhh--HHHHHHHhcCCCCce------EEEeeCh-----------hHH
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVH--NLRSISDFFK--PLIDFMAALPLDKKV------ILVGHSY-----------GGL 60 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~--~l~~~l~~~~~~~~~------~lvGhS~-----------Gg~ 60 (234)
|.+.||.|+.+|-...|....... ..+-..|..+ -+.+++.+. ..+-| ..||-|+ +|.
T Consensus 20 Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gT 98 (329)
T COG1087 20 LLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-KIDAVVHFAASISVGESVQNPLKYYDNNVVGT 98 (329)
T ss_pred HHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-CCCEEEECccccccchhhhCHHHHHhhchHhH
Confidence 567899999999988776553221 0111222222 344555554 33332 3566664 333
Q ss_pred -HHHHHHHhCCcccceeEEeccCC
Q 026718 61 -AVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 61 -~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
..++.+.++ .|+.+|+.++..
T Consensus 99 l~Ll~am~~~--gv~~~vFSStAa 120 (329)
T COG1087 99 LNLIEAMLQT--GVKKFIFSSTAA 120 (329)
T ss_pred HHHHHHHHHh--CCCEEEEecchh
Confidence 344444443 489999888754
No 342
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=40.65 E-value=1.2e+02 Score=22.18 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=33.6
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccC-CCcceeecChHHHHHHHHHHh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKD-SDHMVMMSKPLELWAHLLSIA 230 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~p~~~~~~i~~fl 230 (234)
.+|++++.|++ ...++..+.+|+.+.+.++. -|.....-.|++..+.|++=.
T Consensus 147 gVPV~lvsGD~------~~~~ea~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~ 199 (263)
T cd08770 147 GVPVVFVSGDA------GLCAEAKELNPNIVTVPVKEGFGGATISIHPGLACKEIRKGV 199 (263)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEeeeeeccccccCCHHHHHHHHHHHH
Confidence 89999999875 22344556679888777763 343333346777777776544
No 343
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=40.55 E-value=63 Score=21.53 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=22.6
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.++++.+...++++++|....+.+|..++.+.
T Consensus 20 ~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l 52 (179)
T TIGR03127 20 LDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRL 52 (179)
T ss_pred HHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHH
Confidence 444444443457899999988888777776643
No 344
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=40.37 E-value=78 Score=24.60 Aligned_cols=52 Identities=8% Similarity=-0.006 Sum_probs=31.9
Q ss_pred CceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHH
Q 026718 6 GHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~ 60 (234)
.|.||.+|.|.+++|..... .-.+++.+-+...++-+ ..+-++++-.+.+..
T Consensus 290 ~fDlIilDPPsF~r~k~~~~--~~~rdy~~l~~~~~~iL-~pgG~l~~~s~~~~~ 341 (393)
T COG1092 290 KFDLIILDPPSFARSKKQEF--SAQRDYKDLNDLALRLL-APGGTLVTSSCSRHF 341 (393)
T ss_pred cccEEEECCcccccCcccch--hHHHHHHHHHHHHHHHc-CCCCEEEEEecCCcc
Confidence 59999999999999875441 23444555555555555 444455554444443
No 345
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=40.33 E-value=32 Score=23.09 Aligned_cols=14 Identities=36% Similarity=0.461 Sum_probs=11.1
Q ss_pred CCceEEEeeChhHH
Q 026718 47 DKKVILVGHSYGGL 60 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~ 60 (234)
....+|||||+--=
T Consensus 100 ~~~tILVGHsL~nD 113 (174)
T cd06143 100 DLGCIFVGHGLAKD 113 (174)
T ss_pred CCCCEEEeccchhH
Confidence 45679999999874
No 346
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=40.16 E-value=67 Score=17.80 Aligned_cols=33 Identities=9% Similarity=0.133 Sum_probs=22.0
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHH
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMA 42 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~ 42 (234)
..+|-+..+|+||+=.- ..|+++..+.+.++++
T Consensus 13 dg~y~~~~Pdlpgc~s~------G~T~eea~~n~~eai~ 45 (73)
T COG1598 13 DGGYVASVPDLPGCHSQ------GETLEEALQNAKEAIE 45 (73)
T ss_pred CCCEEEEeCCCCCcccc------CCCHHHHHHHHHHHHH
Confidence 56799999999998432 1456666665555554
No 347
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.58 E-value=26 Score=25.10 Aligned_cols=18 Identities=22% Similarity=0.350 Sum_probs=16.1
Q ss_pred EEEeeChhHHHHHHHHHh
Q 026718 51 ILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 51 ~lvGhS~Gg~~a~~~a~~ 68 (234)
.++|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 578999999999999876
No 348
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=39.27 E-value=84 Score=21.63 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=29.1
Q ss_pred HHHHhcCCCCceEEEee-ChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 39 DFMAALPLDKKVILVGH-SYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGh-S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+..+.+ ...++.++|- .+|+.++..++.. -+..+++++.-
T Consensus 14 ~~q~~L-~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKL-EQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHH-hCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 344556 6778989884 5788888888763 47788988864
No 349
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=38.93 E-value=1.4e+02 Score=21.89 Aligned_cols=52 Identities=15% Similarity=0.099 Sum_probs=33.5
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccC-CCc-ceeecChHHHHHHHHHHh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKD-SDH-MVMMSKPLELWAHLLSIA 230 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH-~~~~~~p~~~~~~i~~fl 230 (234)
.+|+.++.|++ ...++..+..|+++.+.++. .|. ....-.|++..+.|++=.
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a 200 (266)
T cd08663 147 GVPVVLVTGDD------AACAEARELGPGVETVAVKEAIGRFAARCLPPAEARALIREAA 200 (266)
T ss_pred CCCEEEEecCH------HHHHHHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHHHH
Confidence 89999998874 22344455678888777763 353 333446777777766543
No 350
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=38.00 E-value=61 Score=24.09 Aligned_cols=21 Identities=24% Similarity=0.365 Sum_probs=17.1
Q ss_pred CCceEEEeeChhHHHHHHHHH
Q 026718 47 DKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
..+++|+|+|=|+.+.-++..
T Consensus 192 ~~~~~LiGFSKGcvVLNqll~ 212 (303)
T PF10561_consen 192 KPPLTLIGFSKGCVVLNQLLY 212 (303)
T ss_pred CCceEEEEecCcchHHHHHHH
Confidence 457999999999998776654
No 351
>PRK02399 hypothetical protein; Provisional
Probab=37.94 E-value=1.4e+02 Score=23.35 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=34.2
Q ss_pred hhhhhHHHHHHHhc---CCCCceEEEeeChhHHHHHHHHHhCCcccceeEE
Q 026718 31 SDFFKPLIDFMAAL---PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVF 78 (234)
Q Consensus 31 ~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 78 (234)
+.+++-...++..+ ...+-++-+|-|.|..++.......|--+-+++.
T Consensus 77 ~~M~~ga~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 77 AAMAEGAAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 33444555565544 2466788999999999999999888866666654
No 352
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=37.43 E-value=27 Score=26.49 Aligned_cols=18 Identities=33% Similarity=0.497 Sum_probs=15.9
Q ss_pred EEEeeChhHHHHHHHHHh
Q 026718 51 ILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 51 ~lvGhS~Gg~~a~~~a~~ 68 (234)
.++|.|.||.+|+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 578999999999999874
No 353
>PF04548 AIG1: AIG1 family; InterPro: IPR006703 This entry represents a domain found in Arabidopsis protein AIG1 which appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 (avrRpt2-induced gene) exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2 []. The domain is also apparently found in a number of mammalian proteins, for example the rat immune-associated nucleotide 4 protein. ; GO: 0005525 GTP binding; PDB: 3LXX_A 3BB4_A 3DEF_A 3BB3_A 2J3E_A 3V70_B 3BB1_A 1H65_B 2XTP_A 3P1J_C ....
Probab=37.26 E-value=72 Score=22.08 Aligned_cols=48 Identities=15% Similarity=0.147 Sum_probs=26.1
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChh
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYG 58 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~G 58 (234)
.|..|..+|-||.+.+. .+-++....+...+......-.++|+=..++
T Consensus 47 ~g~~v~VIDTPGl~d~~------~~~~~~~~~i~~~l~~~~~g~ha~llVi~~~ 94 (212)
T PF04548_consen 47 DGRQVTVIDTPGLFDSD------GSDEEIIREIKRCLSLCSPGPHAFLLVIPLG 94 (212)
T ss_dssp TTEEEEEEE--SSEETT------EEHHHHHHHHHHHHHHTTT-ESEEEEEEETT
T ss_pred cceEEEEEeCCCCCCCc------ccHHHHHHHHHHHHHhccCCCeEEEEEEecC
Confidence 47889999999997765 2445555556555543312223333335555
No 354
>PF04951 Peptidase_M55: D-aminopeptidase; InterPro: IPR007035 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M55 (DppA aminopeptidase family, clan MN). The type example is Bacillus subtilis DppA, which is a binuclear zinc-dependent, D-specific aminopeptidase. The structure reveals that DppA is a new example of a self-compartmentalising protease, a family of proteolytic complexes. Proteasomes are the most extensively studied representatives of this family. The DppA enzyme is composed of identical 30 kDa subunits organised in a decamer with 52 point-group symmetry. A 20 A wide channel runs through the complex, giving access to a central chamber holding the active sites. The structure shows DppA to be a prototype of a new family of metalloaminopeptidases characterised by the SXDXEG key sequence []. The only known substrates are D-ala-D-ala and D-ala-gly-gly.; PDB: 1HI9_A.
Probab=37.18 E-value=96 Score=22.61 Aligned_cols=52 Identities=15% Similarity=0.082 Sum_probs=32.9
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCC--CcceeecChHHHHHHHHHHh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDS--DHMVMMSKPLELWAHLLSIA 230 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~--gH~~~~~~p~~~~~~i~~fl 230 (234)
.+|+.++.|++ ...++..+.+|+.+.+.++.+ .+....-.|++..+.|++=.
T Consensus 147 GVPV~lVsGD~------~l~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~i~~~a 200 (265)
T PF04951_consen 147 GVPVVLVSGDD------ALCEEAKELLPWIVTVAVKEGIGRYAAISLHPAEACERIREAA 200 (265)
T ss_dssp T--EEEEEEEH------HHHHHHHTTSTT-EEEEEEEEEETTEEEE--HHHHHHHHHHHH
T ss_pred CCcEEEEeCcH------HHHHHHHHhCCCceEEEEecccCCCccccCCHHHHHHHHHHHH
Confidence 89999999975 345667788898877777642 34455667877777776543
No 355
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=37.12 E-value=45 Score=20.56 Aligned_cols=31 Identities=26% Similarity=0.547 Sum_probs=23.4
Q ss_pred ceEEEe-eChhHHHHHHHHHhCCcccceeEEec
Q 026718 49 KVILVG-HSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 49 ~~~lvG-hS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
++.++| ..+.|...+.+...+|+ +.-+.+++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 578999 99999988888888875 55444444
No 356
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=36.57 E-value=1.6e+02 Score=21.58 Aligned_cols=52 Identities=8% Similarity=0.056 Sum_probs=32.9
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccC-CCccee-ecChHHHHHHHHHHh
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKD-SDHMVM-MSKPLELWAHLLSIA 230 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~p~~~~~~i~~fl 230 (234)
.+|+.++.|++- ..++..+.+|+++.+.++. .|++.- .-.|++..+.|++=.
T Consensus 146 gVPV~lvsGDd~------~~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a 199 (265)
T cd00281 146 GVPVVMVAGDAE------VCKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGT 199 (265)
T ss_pred CCCEEEEecCHH------HHHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHH
Confidence 899999998752 2344555679888877763 354333 345666666665543
No 357
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=36.57 E-value=32 Score=26.59 Aligned_cols=32 Identities=19% Similarity=0.412 Sum_probs=28.2
Q ss_pred CCceEEEeeChhHHHHHHHHHhCCcccceeEE
Q 026718 47 DKKVILVGHSYGGLAVAQSMERFPNKISVAVF 78 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 78 (234)
..+++++|.+.||.-.=..+.++|+.+.++.+
T Consensus 118 ~g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i 149 (392)
T PRK14046 118 SERVRVIASARGGMEIEEIAAKEPEAIIQVVV 149 (392)
T ss_pred CCcEEEEEeCCCCCchHHHhhhChhheEEEEc
Confidence 46788999999999999999999999988875
No 358
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=36.49 E-value=29 Score=26.06 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=14.5
Q ss_pred EEEeeChhHHHHHHHHH
Q 026718 51 ILVGHSYGGLAVAQSME 67 (234)
Q Consensus 51 ~lvGhS~Gg~~a~~~a~ 67 (234)
.+.|.|.||.+|+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 57899999999988764
No 359
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=35.96 E-value=1.2e+02 Score=19.63 Aligned_cols=41 Identities=15% Similarity=0.249 Sum_probs=23.8
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
.++.+++..+...+..-....-+.+.|.-+|-.++ |.++|.
T Consensus 39 ~dYpd~a~~va~~V~~~~~~~GIliCGtGiG~sia---ANK~~G 79 (143)
T TIGR01120 39 TDYPHYAKQVALAVAGGEVDGGILICGTGIGMSIA---ANKFAG 79 (143)
T ss_pred CCHHHHHHHHHHHHHCCCCceEEEEcCCcHHHHHH---HhcCCC
Confidence 46788888877777554122335555665565433 445654
No 360
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=35.78 E-value=2.1e+02 Score=22.73 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=39.5
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc--ccceeEEe
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN--KISVAVFV 79 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~ 79 (234)
..+|.++.+|-+|....+ +...+.+..+.+.+ ....+++|--++-|.-+...|..+-+ .+.++|+-
T Consensus 180 ~~~~DvVIIDTaGr~~~d---------~~l~~eL~~i~~~~-~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIlT 247 (428)
T TIGR00959 180 ENGFDVVIVDTAGRLQID---------EELMEELAAIKEIL-NPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVLT 247 (428)
T ss_pred hcCCCEEEEeCCCccccC---------HHHHHHHHHHHHhh-CCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEEe
Confidence 467899999999874321 22444455555555 45566666666666666666655432 46677654
No 361
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=35.73 E-value=48 Score=24.06 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=25.9
Q ss_pred HHHHHhcCCCCce-EEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 38 IDFMAALPLDKKV-ILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 38 ~~~l~~~~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
.++++.- ..++ .++|.|+|+.-+..+..+.+.+-.+++
T Consensus 31 D~fl~a~--~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~ 69 (292)
T COG4667 31 DEFLRAN--FNPFDLVVGVSAGALNLVAYLSKQRGRARRVI 69 (292)
T ss_pred HHHHHhc--cCCcCeeeeecHhHHhHHHHhhcCCchHHHHH
Confidence 3445332 3444 478999999998888887777655544
No 362
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=35.23 E-value=81 Score=21.06 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=22.1
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.++++.+...++++++|....+.+|..++.+.
T Consensus 23 l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l 55 (179)
T cd05005 23 LDKLISAILNAKRIFVYGAGRSGLVAKAFAMRL 55 (179)
T ss_pred HHHHHHHHHhCCeEEEEecChhHHHHHHHHHHH
Confidence 344444443458899999887777777776644
No 363
>KOG2248 consensus 3'-5' exonuclease [Replication, recombination and repair]
Probab=35.05 E-value=44 Score=25.72 Aligned_cols=45 Identities=27% Similarity=0.359 Sum_probs=29.6
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeChhHH-HHHHHHHhCCcccceeEEec
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSYGGL-AVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~-~a~~~a~~~p~~v~~lvl~~ 80 (234)
..+|+...+..+ -...-++||||+=.- -|+.+ .||.-++..++..
T Consensus 279 tl~dvq~~l~~~-~~~~TILVGHSLenDL~aLKl--~H~~ViDTa~lf~ 324 (380)
T KOG2248|consen 279 TLEDVQKELLEL-ISKNTILVGHSLENDLKALKL--DHPSVIDTAVLFK 324 (380)
T ss_pred CHHHHHHHHHhh-cCcCcEEEeechhhHHHHHhh--hCCceeeeeEEEe
Confidence 345666666666 678899999999864 45554 4565565554444
No 364
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=34.99 E-value=53 Score=22.71 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=16.7
Q ss_pred HHHHHHhcCCCCceEEEeeChhHH
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~ 60 (234)
+.+++... ..+.+.||||+=|=.
T Consensus 142 i~~~i~~~-~~~tVLIVGHnp~i~ 164 (201)
T PRK15416 142 IKDLQRKS-PDKNIVIFTHNHCLT 164 (201)
T ss_pred HHHHHHhC-CCCEEEEEeCchhHH
Confidence 35666666 457899999997754
No 365
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=34.96 E-value=24 Score=28.01 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=25.7
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
+.=|-++.|.|+||.+|..++.+.-+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 56778899999999999999987766665553
No 366
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=34.53 E-value=77 Score=24.15 Aligned_cols=34 Identities=24% Similarity=0.492 Sum_probs=24.3
Q ss_pred CceEEEeeChhHHHHHHHHH-hCCcccceeEEecc
Q 026718 48 KKVILVGHSYGGLAVAQSME-RFPNKISVAVFVSA 81 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~lvl~~~ 81 (234)
.+++++|-|.||.-|++... ..|..+..-+++..
T Consensus 157 ~~iV~IGaStGGp~AL~~il~~lP~~~p~pvvIvQ 191 (350)
T COG2201 157 RKIVAIGASTGGPAALRAVLPALPADFPAPVVIVQ 191 (350)
T ss_pred ccEEEEEeCCCCHHHHHHHHHhCCCCCCCCEEEEe
Confidence 46899999999998888654 45776664444443
No 367
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=34.51 E-value=69 Score=17.78 Aligned_cols=31 Identities=13% Similarity=0.314 Sum_probs=15.5
Q ss_pred ceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 49 KVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 49 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+++++|-+.-|. ++|......=..+.++...
T Consensus 1 ~vvViGgG~ig~---E~A~~l~~~g~~vtli~~~ 31 (80)
T PF00070_consen 1 RVVVIGGGFIGI---ELAEALAELGKEVTLIERS 31 (80)
T ss_dssp EEEEESSSHHHH---HHHHHHHHTTSEEEEEESS
T ss_pred CEEEECcCHHHH---HHHHHHHHhCcEEEEEecc
Confidence 467777555554 4443332223455555543
No 368
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=34.50 E-value=1.1e+02 Score=22.49 Aligned_cols=52 Identities=17% Similarity=0.145 Sum_probs=29.3
Q ss_pred CCCceEEeecCCCCCCCCCCC--CCCCchhhhhhHHHHHHHhc-CCCCceEEEee
Q 026718 4 SSGHNVTAFDLAASGVEPQQV--HNLRSISDFFKPLIDFMAAL-PLDKKVILVGH 55 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGh 55 (234)
..+.++|++|---+....... ..........+.+.+.|+.. ....+++|+||
T Consensus 167 ~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~~~v~I~~H 221 (296)
T cd00842 167 KPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAGEKVWIIGH 221 (296)
T ss_pred CCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 346778888754333221110 01123456667777777765 23568889988
No 369
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=33.90 E-value=1.4e+02 Score=19.48 Aligned_cols=59 Identities=22% Similarity=0.314 Sum_probs=32.1
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
|.++||.|+ |+ |..+. . ..++.+++..+...+..-....-+.+.|...|-.++ |.++|.
T Consensus 20 L~~~g~eV~--D~---G~~~~-~--~~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~sia---ANK~~G 78 (144)
T TIGR00689 20 LKQKGHEVI--DC---GTLYD-E--RVDYPDYAKLVADKVVAGEVSLGILICGTGIGMSIA---ANKFKG 78 (144)
T ss_pred HHHCCCEEE--Ec---CCCCC-C--CCChHHHHHHHHHHHHcCCCceEEEEcCCcHHHHHH---HhcCCC
Confidence 456777764 44 21111 1 246788888887777654222335556666665433 456664
No 370
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=33.87 E-value=96 Score=26.17 Aligned_cols=39 Identities=8% Similarity=0.112 Sum_probs=28.6
Q ss_pred EEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEe
Q 026718 9 VTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVG 54 (234)
Q Consensus 9 vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 54 (234)
.-.+.-||+|++. +++++.++.+.+...++ ..-++.++|
T Consensus 632 te~isCPgCGRT~------~dlq~~~~~I~~~~~hl-~GvkiavMG 670 (733)
T PLN02925 632 TEYVSCPSCGRTL------FDLQEVSAEIREKTSHL-PGVSIAIMG 670 (733)
T ss_pred CeEEECCCCCCcc------ccHHHHHHHHHHHhhcC-CCceEEEEe
Confidence 3445578888874 67999999998888888 334666665
No 371
>PF01751 Toprim: Toprim domain; InterPro: IPR006171 This is a conserved region from DNA primase. This corresponds to the Toprim (topoisomerase-primase) domain common to DnaG primases, topoisomerases, OLD family nucleases and RecR/M DNA repair proteins []. Both DnaG motifs IV and V are present in the alignment, the DxD (V) motif may be involved in Mg2+ binding and mutations to the conserved glutamate (IV) completely abolish DnaG type primase activity. DNA primase 2.7.7.6 from EC is a nucleotidyltransferase it synthesizes the oligoribonucleotide primers required for DNA replication on the lagging strand of the replication fork; it can also prime the leading stand and has been implicated in cell division []. This family also includes the atypical archaeal A subunit from type II DNA topoisomerases []. Type II DNA topoisomerases catalyse the relaxation of DNA supercoiling by causing transient double strand breaks.; PDB: 2ZJT_A 3IG0_A 3M4I_A 3NUH_B 1GKU_B 1GL9_C 3PWT_A 1CY4_A 1ECL_A 1CY7_A ....
Probab=33.67 E-value=1e+02 Score=18.11 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=24.6
Q ss_pred HHHHHHHHHhCCCCcEEEccCCCcceeecChHHH
Q 026718 189 KDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLEL 222 (234)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~ 222 (234)
+.....+.+.+......+++-.||.+.+..|+..
T Consensus 8 ps~a~~i~~~l~~~~~~v~~~~Ghl~~~~~~~~~ 41 (100)
T PF01751_consen 8 PSDAKAIAKALGGEEYIVIATSGHLLELAKPEDY 41 (100)
T ss_dssp HHHHHHHHHHSSTTTEEEEEESSSSEESTTSSHH
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCccccccccccc
Confidence 3456677777775567777778999998886553
No 372
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=33.22 E-value=1.6e+02 Score=21.26 Aligned_cols=57 Identities=12% Similarity=0.171 Sum_probs=41.0
Q ss_pred CchhhhhhHHHHHHHhcC---CCCceEE---EeeChhHHHH-HHHHHhCCcccceeEEeccCCC
Q 026718 28 RSISDFFKPLIDFMAALP---LDKKVIL---VGHSYGGLAV-AQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~---~~~~~~l---vGhS~Gg~~a-~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
.+-.++-+++..++.+.. +..+.++ .|.++-|-.| ..++.-.|..|+++.+++|...
T Consensus 17 ~~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHH 80 (296)
T KOG3086|consen 17 ASGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHH 80 (296)
T ss_pred CCHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCcce
Confidence 366788889999998872 2234555 4888877654 4556666889999999998653
No 373
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=33.22 E-value=30 Score=27.28 Aligned_cols=51 Identities=12% Similarity=-0.028 Sum_probs=32.5
Q ss_pred EEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 177 VYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 177 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
.++.|..|..++.+..+... +.....+.++ +.|..++.+++ +.+.|..||.
T Consensus 370 ~~~y~dGDGTV~~~S~~~~~--~~~~~~~~l~-~~H~~il~n~~-v~~~I~~fL~ 420 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKADG--LNAVARVGVP-GDHRGILRDEH-VFRILKHWLK 420 (440)
T ss_pred eEEEeCCCCEEecchhhccC--ccccccccCC-chHHHHhcCHH-HHHHHHHHHh
Confidence 44556667777766654321 2334456667 89998887654 6678888875
No 374
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=33.13 E-value=1.5e+02 Score=20.91 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=26.9
Q ss_pred CCCceEEEeeChhHHH----HHHHHHhCCcccceeEEeccCCC
Q 026718 46 LDKKVILVGHSYGGLA----VAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~----a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
..+++.+.||.||-.- +.++...| .|+.+|-+++...
T Consensus 54 KGk~iSvmg~GmGipS~sIY~~ELi~~y--~Vk~iIRvGt~Ga 94 (236)
T COG0813 54 KGKKISVMGHGMGIPSISIYSRELITDY--GVKKIIRVGTCGA 94 (236)
T ss_pred cCcEEEEEEecCCCccHHHHHHHHHHHh--CcceEEEEEcccc
Confidence 5689999999999653 34444444 4899998887543
No 375
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=33.06 E-value=75 Score=23.21 Aligned_cols=48 Identities=19% Similarity=0.329 Sum_probs=25.8
Q ss_pred chhhhh-hHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 29 SISDFF-KPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 29 ~~~~~~-~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
++++-- .-+..+++++ .+..++.=+|..|||. +..+|.++.-.|.++.
T Consensus 42 ~Le~AQ~~k~~~~~~~~~l~~G~~vLDiGcGwG~~-~~~~a~~~g~~v~git 92 (273)
T PF02353_consen 42 TLEEAQERKLDLLCEKLGLKPGDRVLDIGCGWGGL-AIYAAERYGCHVTGIT 92 (273)
T ss_dssp -HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHH-HHHHHHHH--EEEEEE
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCEEEEeCCCccHH-HHHHHHHcCcEEEEEE
Confidence 444433 2344555555 3556788899999997 4556666654555554
No 376
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=32.93 E-value=64 Score=24.45 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=22.9
Q ss_pred ceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 49 KVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 49 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+++++|-++||..+..-+.+....-..++++++.
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~ 34 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPS 34 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCC
Confidence 4789999999987766554332223567888753
No 377
>KOG2486 consensus Predicted GTPase [General function prediction only]
Probab=32.93 E-value=1.3e+02 Score=22.23 Aligned_cols=19 Identities=21% Similarity=0.207 Sum_probs=13.9
Q ss_pred CceEEeecCCCCCCCCCCC
Q 026718 6 GHNVTAFDLAASGVEPQQV 24 (234)
Q Consensus 6 g~~vi~~D~~G~G~S~~~~ 24 (234)
|-+.+.+|+||+|......
T Consensus 182 ~~~~~~vDlPG~~~a~y~~ 200 (320)
T KOG2486|consen 182 GKSWYEVDLPGYGRAGYGF 200 (320)
T ss_pred cceEEEEecCCcccccCCc
Confidence 3456789999998876443
No 378
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=32.87 E-value=1.4e+02 Score=19.47 Aligned_cols=49 Identities=16% Similarity=0.257 Sum_probs=27.8
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
.++.+++..+...+..-....-+.+.|...|-.++ |.++|. |+..+..+
T Consensus 41 ~dYpd~a~~va~~V~~g~~~~GIliCGtGiG~sia---ANK~~G-IRAA~~~d 89 (148)
T PRK05571 41 VDYPDYAKKVAEAVVAGEADRGILICGTGIGMSIA---ANKVKG-IRAALCHD 89 (148)
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHHH---HhcCCC-eEEEEECC
Confidence 46778888777777554223346666666665543 446654 33333333
No 379
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.86 E-value=1.6e+02 Score=23.82 Aligned_cols=51 Identities=16% Similarity=0.238 Sum_probs=35.1
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHH
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQ 64 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~ 64 (234)
.+||.|+.+|-.|.=.. -..+...+..+++.- ..+.++.||--+=|.=+..
T Consensus 464 ~~gfDVvLiDTAGR~~~---------~~~lm~~l~k~~~~~-~pd~i~~vgealvg~dsv~ 514 (587)
T KOG0781|consen 464 NQGFDVVLIDTAGRMHN---------NAPLMTSLAKLIKVN-KPDLILFVGEALVGNDSVD 514 (587)
T ss_pred hcCCCEEEEeccccccC---------ChhHHHHHHHHHhcC-CCceEEEehhhhhCcHHHH
Confidence 47899999998876332 233445566677665 7788888888777765443
No 380
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=32.82 E-value=96 Score=24.62 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=26.5
Q ss_pred hHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 35 KPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
.|..+++..+ ..+++.++|....|..+..++...
T Consensus 3 ~~~~~~~~~~-~~~~i~v~G~G~sG~a~a~~L~~~ 36 (458)
T PRK01710 3 RDFNEFKKFI-KNKKVAVVGIGVSNIPLIKFLVKL 36 (458)
T ss_pred chHHHHhhhh-cCCeEEEEcccHHHHHHHHHHHHC
Confidence 4667788888 678999999999999666666543
No 381
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=32.71 E-value=85 Score=24.27 Aligned_cols=19 Identities=21% Similarity=0.165 Sum_probs=16.7
Q ss_pred eEEEeeChhHHHHHHHHHh
Q 026718 50 VILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 50 ~~lvGhS~Gg~~a~~~a~~ 68 (234)
-.++|.|.|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 4589999999999998875
No 382
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=32.65 E-value=1.7e+02 Score=20.33 Aligned_cols=38 Identities=8% Similarity=-0.071 Sum_probs=30.7
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCC
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDS 210 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (234)
..|++++.|..+...+++..+.+.+.+.+.-++.++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC
Confidence 66999999999998888888888887776667777755
No 383
>cd01852 AIG1 AIG1 (avrRpt2-induced gene 1). This represents Arabidoposis protein AIG1 that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).
Probab=32.56 E-value=1.6e+02 Score=19.93 Aligned_cols=17 Identities=18% Similarity=0.145 Sum_probs=14.0
Q ss_pred CCceEEeecCCCCCCCC
Q 026718 5 SGHNVTAFDLAASGVEP 21 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~ 21 (234)
.|..+..+|-||.+.+.
T Consensus 47 ~~~~i~viDTPG~~d~~ 63 (196)
T cd01852 47 DGRRVNVIDTPGLFDTS 63 (196)
T ss_pred CCeEEEEEECcCCCCcc
Confidence 46788999999998764
No 384
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=32.43 E-value=2.6e+02 Score=22.24 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=39.5
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEE-eeChhHHHHHHHHHhCC-cccceeEEe
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILV-GHSYGGLAVAQSMERFP-NKISVAVFV 79 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv-GhS~Gg~~a~~~a~~~p-~~v~~lvl~ 79 (234)
.++.++.+|-+|.-. .-....+.+.++++.. ....++|+ .-++++.-+...+..+. -.+.++|+-
T Consensus 319 ~~~DvVLIDTaGRs~---------kd~~lm~EL~~~lk~~-~PdevlLVLsATtk~~d~~~i~~~F~~~~idglI~T 385 (436)
T PRK11889 319 ARVDYILIDTAGKNY---------RASETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 385 (436)
T ss_pred cCCCEEEEeCccccC---------cCHHHHHHHHHHHhhc-CCCeEEEEECCccChHHHHHHHHHhcCCCCCEEEEE
Confidence 368999999988732 1233455566777665 34455555 33466666666666653 346677654
No 385
>PF14987 NADHdh_A3: NADH dehydrogenase 1 alpha subcomplex subunit 3
Probab=32.39 E-value=78 Score=17.93 Aligned_cols=29 Identities=31% Similarity=0.379 Sum_probs=20.6
Q ss_pred hHHHHHHHhcCCCCceEEEeeChhHHHHH
Q 026718 35 KPLIDFMAALPLDKKVILVGHSYGGLAVA 63 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~ 63 (234)
.-+.++++..-..+++.++.+..||..++
T Consensus 3 ~r~~afLKnAWaKEPVlvvSf~ig~lavi 31 (84)
T PF14987_consen 3 ARLGAFLKNAWAKEPVLVVSFVIGGLAVI 31 (84)
T ss_pred hHHHHHHHHhhhcCCeEEeeehhhhhhhh
Confidence 34556666554678899999999987543
No 386
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=32.24 E-value=1.4e+02 Score=22.28 Aligned_cols=43 Identities=26% Similarity=0.210 Sum_probs=29.1
Q ss_pred CchhhhhhHHHHHHHhc----CCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 28 RSISDFFKPLIDFMAAL----PLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+..+.-+..-.+.+++. .+.+++.++|.|-|=.+|.+.++.+.
T Consensus 18 ~GCe~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 18 YGCEANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred ccHHHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhC
Confidence 33444333333444443 36788999999999999999888775
No 387
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=31.92 E-value=97 Score=24.40 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=25.3
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+.+.+... ..++++++| ||.+++++|......=..+.++..
T Consensus 139 l~~~l~~~-~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~ 179 (438)
T PRK13512 139 IDQFIKAN-QVDKALVVG---AGYISLEVLENLYERGLHPTLIHR 179 (438)
T ss_pred HHHHHhhc-CCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEec
Confidence 34444443 457899999 677888877654333345666654
No 388
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=31.70 E-value=2.4e+02 Score=22.11 Aligned_cols=50 Identities=12% Similarity=0.193 Sum_probs=29.6
Q ss_pred CCCCCceEEeecCCCC---CCCCCCCCCCCchhhhhhHHHHHHHh--cCCCCceEEEee
Q 026718 2 IKSSGHNVTAFDLAAS---GVEPQQVHNLRSISDFFKPLIDFMAA--LPLDKKVILVGH 55 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~l~~~l~~--~~~~~~~~lvGh 55 (234)
|.+.|+.|+-+. +|+ |...... ..+.++.+..+...+.. + ..+++.+-|-
T Consensus 142 L~~~G~~ii~P~-~g~la~~~~g~gr--~~~~~~I~~~~~~~~~~~~l-~gk~vlITgG 196 (399)
T PRK05579 142 LRSRGVEIIGPA-SGRLACGDVGPGR--MAEPEEIVAAAERALSPKDL-AGKRVLITAG 196 (399)
T ss_pred HHHCCCEEECCC-CccccCCCcCCCC--CCCHHHHHHHHHHHhhhccc-CCCEEEEeCC
Confidence 456688877554 333 3333222 35778888877777643 3 4456667666
No 389
>PRK06490 glutamine amidotransferase; Provisional
Probab=31.54 E-value=83 Score=22.41 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=23.6
Q ss_pred hhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHH
Q 026718 30 ISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQS 65 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~ 65 (234)
-..+...+.++|+.. -..++=++|.|+|..+...+
T Consensus 68 ~~~wi~~~~~~i~~~-~~~~~PvLGIC~G~Qlla~a 102 (239)
T PRK06490 68 PDDFIRREIDWISVP-LKENKPFLGICLGAQMLARH 102 (239)
T ss_pred CchHHHHHHHHHHHH-HHCCCCEEEECHhHHHHHHH
Confidence 344566666777754 23445689999999876665
No 390
>PF01715 IPPT: IPP transferase; InterPro: IPR002627 tRNA isopentenyltransferases 2.5.1.8 from EC also known as tRNA delta(2)-isopentenylpyrophosphate transferases or IPP transferases. These enzymes modify both cytoplasmic and mitochondrial tRNAs at A(37) to give isopentenyl A(37) [].; GO: 0005524 ATP binding, 0008033 tRNA processing; PDB: 2ZXU_A 3FOZ_A 2ZM5_B 3D3Q_A 3EXA_B 2QGN_A 3A8T_A 3EPK_B 3EPH_A 3EPJ_A ....
Probab=31.49 E-value=55 Score=23.53 Aligned_cols=30 Identities=27% Similarity=0.344 Sum_probs=19.2
Q ss_pred CCCCchhhhhhHHHHHHHhc-CCCCceEEEe
Q 026718 25 HNLRSISDFFKPLIDFMAAL-PLDKKVILVG 54 (234)
Q Consensus 25 ~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvG 54 (234)
...|+..++.++...+++.+ ...+..+|||
T Consensus 33 ~e~ysv~~f~~~a~~~i~~i~~rgk~PIlvG 63 (253)
T PF01715_consen 33 DEEYSVGDFQRDAREAIEDILARGKIPILVG 63 (253)
T ss_dssp TS---HHHHHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHhcCCeEEEEC
Confidence 34589999999999998877 2345566665
No 391
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=31.33 E-value=85 Score=21.62 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=27.7
Q ss_pred CCCCCCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChhHH
Q 026718 21 PQQVHNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYGGL 60 (234)
Q Consensus 21 ~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~ 60 (234)
..|....++.+.|...+.+++... ....+++++|.|+=..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~lGDSit~g 45 (214)
T cd01820 5 PTPVDDLDGDPRWMSRHERFVAEAKQKEPDVVFIGDSITQN 45 (214)
T ss_pred CcCCcccccchhHHHHHHHHHHHhhcCCCCEEEECchHhhh
Confidence 344445577788888888888764 2446799999996443
No 392
>COG3675 Predicted lipase [Lipid metabolism]
Probab=31.31 E-value=32 Score=25.19 Aligned_cols=32 Identities=19% Similarity=0.347 Sum_probs=21.1
Q ss_pred HHHHHHHhcCCCCceEEEeeChhHHHHHHHHH
Q 026718 36 PLIDFMAALPLDKKVILVGHSYGGLAVAQSME 67 (234)
Q Consensus 36 ~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 67 (234)
....+++.++..-.+.++|||.|+.++...+.
T Consensus 163 q~~~lleeiP~~Yrig~tghS~g~aii~vrGt 194 (332)
T COG3675 163 QEQTLLEEIPQGYRIGITGHSSGGAIICVRGT 194 (332)
T ss_pred HHHHHHHhcccceEEEEEeecCCccEEEEecc
Confidence 34455666622356899999999987655443
No 393
>PF06956 RtcR: Regulator of RNA terminal phosphate cyclase; InterPro: IPR009715 RtcR is a sigma54-dependent enhancer binding protein [] that activates transcription of the rtcBA operon. The product of the rtcA gene is an RNA 3 -terminal phosphate cyclase []. This domain is found at the N terminus of the RtcR sequence. RtcR, and other sigma54-dependent activators, contain IPR002078 from INTERPRO in the central region of the protein sequence.
Probab=31.18 E-value=1.1e+02 Score=20.62 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=36.4
Q ss_pred EEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecCh---HHHHHHHHHHhhcc
Q 026718 176 RVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKP---LELWAHLLSIAGNY 233 (234)
Q Consensus 176 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p---~~~~~~i~~fl~~~ 233 (234)
.-+++..++.-.-....+.+.+..|..++...+ +.+.+| +++...+.+|++.|
T Consensus 43 LeLl~~~~~~~LA~~v~~Di~~vSP~TeV~~~~-----v~l~dPWDfeeVY~~l~dfa~~Y 98 (183)
T PF06956_consen 43 LELLHDPRYRALAEQVRRDIAQVSPETEVRLHE-----VELADPWDFEEVYAALHDFARGY 98 (183)
T ss_pred EEEEecCcHHHHHHHHHHHHHhcCCCCEEEEEE-----eccCCCccHHHHHHHHHHHHhhC
Confidence 456677777666666777777787876664433 335566 77888888888766
No 394
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=31.05 E-value=1.3e+02 Score=22.15 Aligned_cols=41 Identities=7% Similarity=0.064 Sum_probs=31.9
Q ss_pred HHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhh
Q 026718 191 LAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
.+..++....+.++.++|+.||--+.-.|+.+.+.|.+--+
T Consensus 111 YttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~ 151 (382)
T COG1103 111 YTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKD 151 (382)
T ss_pred HHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHh
Confidence 34455555567799999999998888899999998887654
No 395
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=30.91 E-value=89 Score=25.25 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=27.3
Q ss_pred chhhhhhHHHHHH-HhcCCCCceEEEee-ChhHHHHHHHHHh
Q 026718 29 SISDFFKPLIDFM-AALPLDKKVILVGH-SYGGLAVAQSMER 68 (234)
Q Consensus 29 ~~~~~~~~l~~~l-~~~~~~~~~~lvGh-S~Gg~~a~~~a~~ 68 (234)
-++++++|+...+ ..+ +..|-.++|| |=||.+|..++.+
T Consensus 382 yLe~fa~d~~~~i~~e~-~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 382 YLEEFADDAEREILAEL-QGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp GHHHHHHHHHHHHHHHH-TS--SEEEEEHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh-CCCCcEEEeccCcchHHHHHHHhh
Confidence 5788898886554 556 6677788885 7788888888775
No 396
>KOG0736 consensus Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification, protein turnover, chaperones]
Probab=30.89 E-value=1.9e+02 Score=25.14 Aligned_cols=71 Identities=15% Similarity=0.198 Sum_probs=44.6
Q ss_pred eEEeec-----CCCCCCCCCCCCCCCchhhhhhHHHHHHHhcC--CCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 8 NVTAFD-----LAASGVEPQQVHNLRSISDFFKPLIDFMAALP--LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 8 ~vi~~D-----~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
.||-+| -|..|.|...- --++..+..+.+-++.+. ..++++++|-+==-= .+-=|...|.|+++++.++
T Consensus 766 CVIFFDELDSlAP~RG~sGDSG---GVMDRVVSQLLAELDgls~~~s~~VFViGATNRPD-LLDpALLRPGRFDKLvyvG 841 (953)
T KOG0736|consen 766 CVIFFDELDSLAPNRGRSGDSG---GVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPD-LLDPALLRPGRFDKLVYVG 841 (953)
T ss_pred eEEEeccccccCccCCCCCCcc---ccHHHHHHHHHHHhhcccCCCCCceEEEecCCCcc-ccChhhcCCCccceeEEec
Confidence 456665 34555554222 257888888888888872 457889988432111 1122445688999999998
Q ss_pred cC
Q 026718 81 AL 82 (234)
Q Consensus 81 ~~ 82 (234)
+.
T Consensus 842 ~~ 843 (953)
T KOG0736|consen 842 PN 843 (953)
T ss_pred CC
Confidence 74
No 397
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=30.68 E-value=1.4e+02 Score=19.39 Aligned_cols=51 Identities=14% Similarity=0.195 Sum_probs=29.0
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHH
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAV 62 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a 62 (234)
|.++||.| .|+ |.+. ..++.+++..+...+..-....-+.+.|.-.|-.++
T Consensus 22 L~~~G~eV--~D~-G~~~-------~~dYpd~a~~va~~V~~~e~~~GIliCGtGiG~sia 72 (141)
T TIGR01118 22 LVDNGFEV--IDV-TEGD-------GQDFVDVTLAVASEVQKDEQNLGIVIDAYGAGSFMV 72 (141)
T ss_pred HHHCCCEE--EEc-CCCC-------CCCcHHHHHHHHHHHHcCCCceEEEEcCCCHhHhhh
Confidence 45678877 444 2211 146777888777777554233446666666665443
No 398
>PRK13936 phosphoheptose isomerase; Provisional
Probab=30.55 E-value=1.5e+02 Score=20.40 Aligned_cols=26 Identities=8% Similarity=0.064 Sum_probs=21.5
Q ss_pred CCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 45 PLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 45 ~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
...++++++|..-.+.+|..++.+..
T Consensus 41 ~~a~~I~i~G~G~S~~~A~~~~~~l~ 66 (197)
T PRK13936 41 LNEGKILACGNGGSAADAQHFSAELL 66 (197)
T ss_pred HCCCEEEEEeCcHhHHHHHHHHHHcc
Confidence 46789999999988889998887654
No 399
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.42 E-value=2.3e+02 Score=22.28 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=31.5
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.+++|.||.+|--|.-. .-..+-+.+.++.+.+ ..+.+++|=-+.=|..|..-|..+
T Consensus 179 fKke~fdvIIvDTSGRh~---------qe~sLfeEM~~v~~ai-~Pd~vi~VmDasiGQaae~Qa~aF 236 (483)
T KOG0780|consen 179 FKKENFDVIIVDTSGRHK---------QEASLFEEMKQVSKAI-KPDEIIFVMDASIGQAAEAQARAF 236 (483)
T ss_pred HHhcCCcEEEEeCCCchh---------hhHHHHHHHHHHHhhc-CCCeEEEEEeccccHhHHHHHHHH
Confidence 346789999999865421 2233444555566666 455555544444444444444433
No 400
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=30.37 E-value=22 Score=26.82 Aligned_cols=26 Identities=27% Similarity=0.491 Sum_probs=19.9
Q ss_pred CCCceEEEeeChhHH-HHHHHHHhCCc
Q 026718 46 LDKKVILVGHSYGGL-AVAQSMERFPN 71 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~-~a~~~a~~~p~ 71 (234)
..+.+.++|.|.|++ ++++..-+.|.
T Consensus 125 ~~~hfTllgQaigsmIl~~Eai~r~~P 151 (465)
T KOG1387|consen 125 TWKHFTLLGQAIGSMILAFEAIIRFPP 151 (465)
T ss_pred cccceehHHHHHHHHHHHHHHHHhCCc
Confidence 456789999999998 56676666653
No 401
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=30.04 E-value=3.3e+02 Score=22.83 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=23.5
Q ss_pred CCceEEEeeChhHHHHHHHHHh----CCcccceeEEeccC
Q 026718 47 DKKVILVGHSYGGLAVAQSMER----FPNKISVAVFVSAL 82 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~lvl~~~~ 82 (234)
.++|+++|-|.||.+.+-.+.+ .-..-+++++.-++
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 5799999999999865544432 22223577766553
No 402
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=30.04 E-value=78 Score=19.61 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=20.8
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeChhHHHH
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSYGGLAV 62 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a 62 (234)
....+.-.+..+ +.+.++++||+--|.+.
T Consensus 45 ~~~sl~~av~~l-~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 45 VLASLEYAVEVL-GVKHIIVCGHTDCGAVK 73 (119)
T ss_pred HHHHHHHHHHhh-CCCEEEEEccCCCcHHH
Confidence 445555566777 88999999997666544
No 403
>PRK00865 glutamate racemase; Provisional
Probab=29.58 E-value=1.5e+02 Score=21.51 Aligned_cols=50 Identities=12% Similarity=0.012 Sum_probs=35.7
Q ss_pred cEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecCh-HHHHHHHH
Q 026718 175 RRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKP-LELWAHLL 227 (234)
Q Consensus 175 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-~~~~~~i~ 227 (234)
|+.++ +..+-.....+++.+.+|+.+++.+-+..|+|.=+++ +++.+.+.
T Consensus 7 ~Igvf---DSGiGGLtvl~~i~~~lp~~~~iY~~D~~~~PYG~ks~~~i~~~~~ 57 (261)
T PRK00865 7 PIGVF---DSGVGGLTVLREIRRLLPDEHIIYVGDTARFPYGEKSEEEIRERTL 57 (261)
T ss_pred eEEEE---ECCccHHHHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHH
Confidence 55554 1223356678899999999999999999999998766 44444443
No 404
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.54 E-value=85 Score=20.17 Aligned_cols=28 Identities=21% Similarity=0.386 Sum_probs=19.8
Q ss_pred hhhhHHHHHHHhcCCCCceEEEeeChhHH
Q 026718 32 DFFKPLIDFMAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 32 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~ 60 (234)
+....+.-.+..+ +.+.++++||+-=|.
T Consensus 41 ~~~~sl~~av~~l-~~~~IiV~gHt~Cg~ 68 (142)
T cd03379 41 DAIRSLVVSVYLL-GTREIIVIHHTDCGM 68 (142)
T ss_pred hHHHHHHHHHHHh-CCCEEEEEeecCCcc
Confidence 3445566666677 889999999975444
No 405
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=29.40 E-value=27 Score=22.68 Aligned_cols=12 Identities=25% Similarity=0.587 Sum_probs=10.8
Q ss_pred eEEEeeChhHHH
Q 026718 50 VILVGHSYGGLA 61 (234)
Q Consensus 50 ~~lvGhS~Gg~~ 61 (234)
.+++|.|.|+++
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 789999999976
No 406
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=28.98 E-value=20 Score=24.00 Aligned_cols=36 Identities=6% Similarity=0.085 Sum_probs=24.5
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+-+.+.++++.. ...-.-.+|-|||++.|+.++-..
T Consensus 83 Yw~El~~i~dwa-~~~v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 83 YWEELTEILDWA-KTHVTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred hHHHHHHHHHHH-HHhCcchHHHHHHHHHHHHHHcCc
Confidence 444566666655 334456789999999999887543
No 407
>COG4813 ThuA Trehalose utilization protein [Carbohydrate transport and metabolism]
Probab=28.91 E-value=1.1e+02 Score=20.90 Aligned_cols=45 Identities=20% Similarity=0.181 Sum_probs=30.1
Q ss_pred cccCCccEEEEeeCCCcc-ccHHHHHHHHHhC-CCCcEEEccCCCcce
Q 026718 169 ERYGTVRRVYIISEKDLV-TEKDLAMWMIKRN-PPHQVEEIKDSDHMV 214 (234)
Q Consensus 169 ~~~~~~P~l~i~g~~D~~-~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 214 (234)
..+.+..+|+.||-.|.- +..+..++.+++. -+.-++++- +||+.
T Consensus 59 ~rLa~tDVLiWWGH~~Hg~V~D~iVeRV~kRV~EGMGLiVLH-SGHfS 105 (261)
T COG4813 59 ERLAKTDVLIWWGHKDHGAVEDEIVERVQKRVWEGMGLIVLH-SGHFS 105 (261)
T ss_pred hhhhccceEEEeccccccccchHHHHHHHHHHhcccceEEEe-ccchh
Confidence 333467899999987753 3445566666553 456778886 88874
No 408
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=28.51 E-value=1.7e+02 Score=21.52 Aligned_cols=35 Identities=11% Similarity=0.008 Sum_probs=23.6
Q ss_pred CccEEEEeeCCCcccc--HHHHHHHHHhCCCCcEEEc
Q 026718 173 TVRRVYIISEKDLVTE--KDLAMWMIKRNPPHQVEEI 207 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~--~~~~~~~~~~~~~~~~~~~ 207 (234)
.+|+.++||-.|.-.+ .....++.+.+|+.-+..+
T Consensus 23 ~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~l 59 (296)
T KOG2541|consen 23 PVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCL 59 (296)
T ss_pred cCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEE
Confidence 4899999999998876 3444445555776544333
No 409
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=28.34 E-value=2.3e+02 Score=20.64 Aligned_cols=50 Identities=22% Similarity=0.305 Sum_probs=34.7
Q ss_pred hhhhhHHHHHHHhc--CCCCceEEEeeChhHH-HHHHHHHhCCcccceeEEecc
Q 026718 31 SDFFKPLIDFMAAL--PLDKKVILVGHSYGGL-AVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 31 ~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~-~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+.+..|..++++.. .+...++++|.+.... .++.+|.+|| .+-..+-+-|
T Consensus 13 ~~~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~-~v~~~~G~HP 65 (256)
T COG0084 13 EEFDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYP-NVYAAVGVHP 65 (256)
T ss_pred hhhcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCC-CeEEEEeeCC
Confidence 45555666666543 2678999999999998 4889999998 3443343333
No 410
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=28.28 E-value=2.4e+02 Score=20.64 Aligned_cols=16 Identities=19% Similarity=0.100 Sum_probs=13.3
Q ss_pred CCCceEEeecCCCCCC
Q 026718 4 SSGHNVTAFDLAASGV 19 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~ 19 (234)
.++|.++.+|-+|...
T Consensus 152 ~~~~D~ViIDT~G~~~ 167 (272)
T TIGR00064 152 ARNIDVVLIDTAGRLQ 167 (272)
T ss_pred HCCCCEEEEeCCCCCc
Confidence 4679999999998864
No 411
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=28.07 E-value=92 Score=21.11 Aligned_cols=31 Identities=16% Similarity=0.273 Sum_probs=22.6
Q ss_pred chhhhhhHHHHHHHhcCCCCceEEEee--ChhHH
Q 026718 29 SISDFFKPLIDFMAALPLDKKVILVGH--SYGGL 60 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~~~~~~~~lvGh--S~Gg~ 60 (234)
......+.+..+++.. +..+|.|.|| |.|.-
T Consensus 97 ~~~~~L~~~a~~L~~~-p~~~i~V~GHTD~~Gs~ 129 (190)
T COG2885 97 KAQATLDELAKYLKKN-PITRILVEGHTDSTGSD 129 (190)
T ss_pred hHHHHHHHHHHHHHhC-CCcEEEEEecCCCCCCH
Confidence 4556677777788777 6889999998 45543
No 412
>PRK10867 signal recognition particle protein; Provisional
Probab=27.95 E-value=3.1e+02 Score=21.85 Aligned_cols=65 Identities=17% Similarity=0.234 Sum_probs=38.6
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc--ccceeEE
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN--KISVAVF 78 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl 78 (234)
..+|.++.+|-+|.... -+...+.+..+.+.. ....+++|.-++-|.-+...+..+-+ .+.++|+
T Consensus 181 ~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v-~p~evllVlda~~gq~av~~a~~F~~~~~i~giIl 247 (433)
T PRK10867 181 ENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAV-NPDEILLVVDAMTGQDAVNTAKAFNEALGLTGVIL 247 (433)
T ss_pred hcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhh-CCCeEEEEEecccHHHHHHHHHHHHhhCCCCEEEE
Confidence 35789999999987432 122334444555444 44556666666666666666655432 3566666
No 413
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=27.77 E-value=1.1e+02 Score=21.49 Aligned_cols=44 Identities=23% Similarity=0.289 Sum_probs=28.0
Q ss_pred HHHHHHHhc--CCCCceEEEeeChhH----HHHHHHHHhCCcccceeEEecc
Q 026718 36 PLIDFMAAL--PLDKKVILVGHSYGG----LAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 36 ~l~~~l~~~--~~~~~~~lvGhS~Gg----~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
++.+||.++ +.+.+.++...|-|+ .+++..|+++- =..+|.+-|
T Consensus 28 ~~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~T--gGR~vCIvp 77 (218)
T PF07279_consen 28 GVAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQT--GGRHVCIVP 77 (218)
T ss_pred CHHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhc--CCeEEEEcC
Confidence 456777776 456788888888885 46677777653 234454443
No 414
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=27.64 E-value=99 Score=17.59 Aligned_cols=25 Identities=20% Similarity=0.408 Sum_probs=18.3
Q ss_pred ccCCCcceeecChHHHHHHHHHHhh
Q 026718 207 IKDSDHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 207 ~~~~gH~~~~~~p~~~~~~i~~fl~ 231 (234)
++++-|.+...+++++.+.|..+++
T Consensus 37 ~~~~~~~~~~~~~~el~~~i~~ll~ 61 (92)
T PF13524_consen 37 FEDGEHIITYNDPEELAEKIEYLLE 61 (92)
T ss_pred cCCCCeEEEECCHHHHHHHHHHHHC
Confidence 4434577777788888888888765
No 415
>PF07812 TfuA: TfuA-like protein; InterPro: IPR012924 This domain consists of a group of sequences that are similar to the core of TfuA protein (Q52872 from SWISSPROT). This protein is involved in the production of trifolitoxin (TFX), a gene-encoded, post-translationally modified peptide antibiotic []. The role of TfuA in TFX synthesis is unknown, and it may be involved in other cellular processes [].
Probab=27.63 E-value=99 Score=19.31 Aligned_cols=27 Identities=22% Similarity=0.240 Sum_probs=16.4
Q ss_pred HHHHhcCCCCceEEEeeChhHHHHHHHH
Q 026718 39 DFMAALPLDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 66 (234)
+++..+ ...-.++=+-|||+.=|.++.
T Consensus 14 EIL~Al-~~Gv~V~GasSMGALRAaEl~ 40 (120)
T PF07812_consen 14 EILWAL-SQGVRVFGASSMGALRAAELA 40 (120)
T ss_pred HHHHHH-HCCCEEEecccHHHHHHHHhH
Confidence 455555 333344445899988776665
No 416
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=27.45 E-value=1.5e+02 Score=18.03 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=22.5
Q ss_pred hhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh
Q 026718 34 FKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 34 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
.+++.++++.- ..+++.++=||.-+.+..++-.+
T Consensus 7 ~eql~~i~~~S-~~~~~~iFKHSt~C~IS~~a~~~ 40 (105)
T PF11009_consen 7 EEQLEEILEES-KEKPVLIFKHSTRCPISAMALRE 40 (105)
T ss_dssp HHHHHHHHHH----SEEEEEEE-TT-HHHHHHHHH
T ss_pred HHHHHHHHHhc-ccCcEEEEEeCCCChhhHHHHHH
Confidence 35667777775 67899999999999888776544
No 417
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=27.37 E-value=1.4e+02 Score=22.55 Aligned_cols=47 Identities=26% Similarity=0.309 Sum_probs=31.7
Q ss_pred hHHHHHHHhcCCCCceEEEeeChhH--HHHHHHHHhCCcccceeEEeccC
Q 026718 35 KPLIDFMAALPLDKKVILVGHSYGG--LAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS~Gg--~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
..+..++..+ ...+++|||-|-== -+=.+++..+|++|.++.+=+-.
T Consensus 266 ~~l~nil~~~-p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 266 QSLRNILRRY-PDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred cHHHHHHHhC-CCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 3445566677 78899999976321 24455677889999888665543
No 418
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=27.14 E-value=1.1e+02 Score=16.48 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=29.3
Q ss_pred cHHHHHHHHHhCCCCcEEEccCCCcceeecChHHHHHHHHHHhhc
Q 026718 188 EKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLELWAHLLSIAGN 232 (234)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 232 (234)
.+...+ -.+.+|+..+..+. +.-+.-.|.-+++.+.|.+|-++
T Consensus 15 N~~~IE-~ie~~PDttItLin-GkkyvVkEsveEVi~kI~~y~rk 57 (67)
T COG1582 15 NAHHIE-TIEAFPDTTITLIN-GKKYVVKESVEEVINKIIEYRRK 57 (67)
T ss_pred CHHHhh-hhhccCCcEEEEEc-CcEEEEcccHHHHHHHHHHHHHH
Confidence 333333 34456886666665 77777788889998888887653
No 419
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=27.00 E-value=2.1e+02 Score=21.02 Aligned_cols=46 Identities=11% Similarity=-0.036 Sum_probs=35.2
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEccCCCcceeecChHH
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIKDSDHMVMMSKPLE 221 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~ 221 (234)
+.|+.++= ..+-.....+++.+++|+.+++.+-+..+++.=+++++
T Consensus 5 ~~~IgvFD---SGVGGLsVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e 50 (269)
T COG0796 5 QPPIGVFD---SGVGGLSVLREIRRQLPDEDIIYVGDTARFPYGEKSEE 50 (269)
T ss_pred CCeEEEEE---CCCCcHHHHHHHHHHCCCCcEEEEecCCCCCCCCCCHH
Confidence 34666662 23345678899999999999999999999999877643
No 420
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=26.98 E-value=1.8e+02 Score=18.78 Aligned_cols=41 Identities=17% Similarity=0.334 Sum_probs=23.7
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
.++.+++..+...+..-....-+.+.|...|-.++ |.++|.
T Consensus 39 ~dy~~~a~~va~~V~~~~~d~GIliCgtGiG~~ia---ANK~~G 79 (140)
T PF02502_consen 39 VDYPDFAEKVAEAVASGEADRGILICGTGIGMSIA---ANKVPG 79 (140)
T ss_dssp --HHHHHHHHHHHHHTTSSSEEEEEESSSHHHHHH---HHTSTT
T ss_pred CCHHHHHHHHHHHHHcccCCeEEEEcCCChhhhhH---hhcCCC
Confidence 57888888888777764122335556666665443 456664
No 421
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=26.95 E-value=2e+02 Score=19.87 Aligned_cols=25 Identities=8% Similarity=0.108 Sum_probs=21.3
Q ss_pred CCCCceEEEeeChhHHHHHHHHHhC
Q 026718 45 PLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 45 ~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
...+++.++|..-.|.+|..++.+.
T Consensus 39 ~~~~rI~~~G~GgSa~~A~~~a~~l 63 (196)
T PRK10886 39 LNGNKILCCGNGTSAANAQHFAASM 63 (196)
T ss_pred HcCCEEEEEECcHHHHHHHHHHHHH
Confidence 4678999999999999999998754
No 422
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Probab=26.83 E-value=1.1e+02 Score=23.62 Aligned_cols=44 Identities=11% Similarity=0.154 Sum_probs=24.0
Q ss_pred hHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 35 KPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+|...+.+.+...++++++|- |.+++++|......=..+.++..
T Consensus 132 ~da~~l~~~~~~~~~vvViGg---G~ig~E~A~~l~~~g~~Vtlv~~ 175 (396)
T PRK09754 132 GDAARLREVLQPERSVVIVGA---GTIGLELAASATQRRCKVTVIEL 175 (396)
T ss_pred HHHHHHHHHhhcCCeEEEECC---CHHHHHHHHHHHHcCCeEEEEec
Confidence 344444444434578999994 55566655543222234555554
No 423
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=26.79 E-value=88 Score=15.09 Aligned_cols=32 Identities=31% Similarity=0.470 Sum_probs=19.0
Q ss_pred ceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEE
Q 026718 7 HNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILV 53 (234)
Q Consensus 7 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv 53 (234)
.+|..+|+-||+ ..+++..+++.+ ..++++++
T Consensus 7 a~v~~~~fSgHa--------------d~~~L~~~i~~~-~p~~vilV 38 (43)
T PF07521_consen 7 ARVEQIDFSGHA--------------DREELLEFIEQL-NPRKVILV 38 (43)
T ss_dssp SEEEESGCSSS---------------BHHHHHHHHHHH-CSSEEEEE
T ss_pred EEEEEEeecCCC--------------CHHHHHHHHHhc-CCCEEEEe
Confidence 356666665553 234667777777 55666665
No 424
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=26.62 E-value=1.4e+02 Score=21.63 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=23.7
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.++++.+...++++++|....+.+|..++.+.
T Consensus 118 l~~~~~~i~~a~~I~i~G~G~s~~~A~~~~~~l 150 (278)
T PRK11557 118 LHECVTMLRSARRIILTGIGASGLVAQNFAWKL 150 (278)
T ss_pred HHHHHHHHhcCCeEEEEecChhHHHHHHHHHHH
Confidence 444444444568899999998888888877654
No 425
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=26.48 E-value=2.1e+02 Score=19.25 Aligned_cols=34 Identities=18% Similarity=0.159 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCCCceEEEe-eChhHHHHHHHHHhC
Q 026718 36 PLIDFMAALPLDKKVILVG-HSYGGLAVAQSMERF 69 (234)
Q Consensus 36 ~l~~~l~~~~~~~~~~lvG-hS~Gg~~a~~~a~~~ 69 (234)
-..++++...+.++++++| ++-|..+|-.++.+.
T Consensus 19 ia~eIiErnk~~~~~vlvGIktrGv~lA~rl~~~i 53 (179)
T COG2065 19 IAHEIIERNKGLDNLVLVGIKTRGVPLAERLAERI 53 (179)
T ss_pred HHHHHHHHhCCCCceEEEeEecCCHHHHHHHHHHH
Confidence 3445666655778999999 666667777777654
No 426
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional
Probab=26.38 E-value=3.3e+02 Score=21.51 Aligned_cols=65 Identities=6% Similarity=0.013 Sum_probs=36.5
Q ss_pred CCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeC-hhHHHHHHHHHhCC-cccceeEEe
Q 026718 5 SGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHS-YGGLAVAQSMERFP-NKISVAVFV 79 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p-~~v~~lvl~ 79 (234)
+++.++.+|-+|... .-.+..+.+..+.+.. ...-+++|.-+ +.+.-+...+..+. -.+.++|+-
T Consensus 284 ~~~D~VLIDTAGr~~---------~d~~~l~EL~~l~~~~-~p~~~~LVLsag~~~~d~~~i~~~f~~l~i~glI~T 350 (407)
T PRK12726 284 NCVDHILIDTVGRNY---------LAEESVSEISAYTDVV-HPDLTCFTFSSGMKSADVMTILPKLAEIPIDGFIIT 350 (407)
T ss_pred CCCCEEEEECCCCCc---------cCHHHHHHHHHHhhcc-CCceEEEECCCcccHHHHHHHHHhcCcCCCCEEEEE
Confidence 568999999998853 2244555666666655 34444555533 33333444444442 336666654
No 427
>PRK09065 glutamine amidotransferase; Provisional
Probab=26.34 E-value=97 Score=22.02 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=23.7
Q ss_pred hhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHH
Q 026718 31 SDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 31 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 66 (234)
..+...+.++++.. -...+-++|.|+|..+...+.
T Consensus 71 ~~w~~~~~~~i~~~-~~~~~PvlGIC~G~Qlla~al 105 (237)
T PRK09065 71 LDWSERTADWLRQA-AAAGMPLLGICYGHQLLAHAL 105 (237)
T ss_pred chhHHHHHHHHHHH-HHCCCCEEEEChhHHHHHHHc
Confidence 34556666777665 334567899999998766644
No 428
>PF02972 Phycoerythr_ab: Phycoerythrin, alpha/beta chain; InterPro: IPR004228 Cryptophytes are unicellular photosynthetic algae that use a lumenally located light-harvesting system, which is distinct from the phycobilisome structure found in cyanobacteria and red algae. One of the key components of this system is water-soluble phycoerythrin (PE) 545 whose expression is enhanced by low light levels []. Phycoerythrin (PE) 545 is a heterodimeric of alpha(1)alpha(2)betabeta subunits. Each alpha subunit carries a covalently linked 15,16-dihydrobiliverdin chromophore that probably acts as the final energy acceptor. The architecture of the heterodimer suggests that PE 545 may dock to an acceptor protein via a deep cleft and that energy may be transferred via this intermediary protein to the reaction centre [].; GO: 0030089 phycobilisome; PDB: 1XG0_B 1QGW_B 1XF6_B.
Probab=26.34 E-value=57 Score=16.96 Aligned_cols=13 Identities=31% Similarity=0.521 Sum_probs=6.6
Q ss_pred EEeecCCCCCCCC
Q 026718 9 VTAFDLAASGVEP 21 (234)
Q Consensus 9 vi~~D~~G~G~S~ 21 (234)
|-.+|.||+.+..
T Consensus 5 ItiFDhRGC~r~~ 17 (57)
T PF02972_consen 5 ITIFDHRGCDRAP 17 (57)
T ss_dssp EEEEE-TT-SS--
T ss_pred EEEecccccCCCc
Confidence 4578999996554
No 429
>PF13289 SIR2_2: SIR2-like domain
Probab=26.30 E-value=1.4e+02 Score=18.66 Aligned_cols=22 Identities=23% Similarity=0.537 Sum_probs=14.7
Q ss_pred HHHHhcCCCCceEEEeeChhHH
Q 026718 39 DFMAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 39 ~~l~~~~~~~~~~lvGhS~Gg~ 60 (234)
..+..+-....++++|+|++=.
T Consensus 78 ~~l~~~l~~~~~lfiGys~~D~ 99 (143)
T PF13289_consen 78 NFLRSLLRSKTLLFIGYSFNDP 99 (143)
T ss_pred HHHHHHHcCCCEEEEEECCCCH
Confidence 3343332567899999998754
No 430
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=26.24 E-value=2e+02 Score=21.68 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=30.8
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHH-HHHHHHHhC
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGL-AVAQSMERF 69 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~-~a~~~a~~~ 69 (234)
|+.+.+++.+.+++++. ....++|+|+|.=|. ++-.+|.+.
T Consensus 62 ~~~e~~~~al~~~i~~~-~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 62 RMIEDYAGVMADTIRQH-GADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred cChHHHHHHHHHHHHhh-CCCcEEEEcCCccHHHHHHHHHHHh
Confidence 67788899999988876 333688998887664 777777654
No 431
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=26.12 E-value=73 Score=23.71 Aligned_cols=32 Identities=6% Similarity=-0.070 Sum_probs=21.5
Q ss_pred HHHHHHHhcCCCCceEEEeeChhHHHHHHHHHh
Q 026718 36 PLIDFMAALPLDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 36 ~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
.+.++++.+ .....-++|-|||+.+++.+...
T Consensus 123 El~~i~~w~-~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 123 ELKEILDWA-KTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHH-HHcCCCEEEEcHHHHHHHHHcCC
Confidence 355555554 23356789999999988876543
No 432
>KOG1336 consensus Monodehydroascorbate/ferredoxin reductase [General function prediction only]
Probab=26.06 E-value=1.3e+02 Score=23.97 Aligned_cols=47 Identities=19% Similarity=0.152 Sum_probs=28.7
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
-++|...++..+....+++. +.||.+++++++..-..-..+.++.+-
T Consensus 199 eieda~~l~~~~~~~~~vV~---vG~G~ig~Evaa~l~~~~~~VT~V~~e 245 (478)
T KOG1336|consen 199 EIEDANRLVAAIQLGGKVVC---VGGGFIGMEVAAALVSKAKSVTVVFPE 245 (478)
T ss_pred cHHHHHHHHHHhccCceEEE---ECchHHHHHHHHHHHhcCceEEEEccC
Confidence 34556666666623333444 557778888877665556667777654
No 433
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=26.01 E-value=1.8e+02 Score=20.09 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=26.9
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHH
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSM 66 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 66 (234)
+.-+.++.....+|..+ .....-++|.|+|..+.....
T Consensus 59 ~~~~~w~~~~~~~i~~~-~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 59 YDEDPWLPREKDLIKDA-GVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred ccccccchhHHHHHHHh-CCCCCCEEEEChhHHHHHHHh
Confidence 33444688888888887 555557899999998655543
No 434
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional
Probab=25.94 E-value=1.3e+02 Score=23.04 Aligned_cols=43 Identities=19% Similarity=0.191 Sum_probs=23.6
Q ss_pred HHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 36 PLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 36 ~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
+...+...+...++++++| ||.+++++|......-..+.++..
T Consensus 130 ~~~~~~~~~~~~~~vvViG---gG~~g~e~A~~L~~~g~~Vtlv~~ 172 (377)
T PRK04965 130 EYRAAETQLRDAQRVLVVG---GGLIGTELAMDLCRAGKAVTLVDN 172 (377)
T ss_pred HHHHHHHHhhcCCeEEEEC---CCHHHHHHHHHHHhcCCeEEEEec
Confidence 3333334433457899999 555555655543333345666654
No 435
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=25.94 E-value=1e+02 Score=19.37 Aligned_cols=32 Identities=16% Similarity=0.280 Sum_probs=25.2
Q ss_pred CceEEEee-ChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 48 KKVILVGH-SYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 48 ~~~~lvGh-S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.++.++|- +.|+.++..++.. -+..+.+++.-
T Consensus 3 ~~v~iiG~G~vGs~va~~L~~~---Gv~~i~lvD~d 35 (135)
T PF00899_consen 3 KRVLIIGAGGVGSEVAKNLARS---GVGKITLVDDD 35 (135)
T ss_dssp -EEEEESTSHHHHHHHHHHHHH---TTSEEEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHh---CCCceeecCCc
Confidence 57889986 6888888888874 47889999974
No 436
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=25.80 E-value=2.2e+02 Score=19.84 Aligned_cols=38 Identities=16% Similarity=0.117 Sum_probs=28.0
Q ss_pred HHhcCCCCceEEEeeC-hhHHHHHHHHHhCCcccceeEEeccC
Q 026718 41 MAALPLDKKVILVGHS-YGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 41 l~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.+.+ ...++.++|-. +|+.++..++.. -+..+++++.-
T Consensus 23 q~~L-~~~~V~ViG~GglGs~ia~~La~~---Gvg~i~lvD~D 61 (212)
T PRK08644 23 LEKL-KKAKVGIAGAGGLGSNIAVALARS---GVGNLKLVDFD 61 (212)
T ss_pred HHHH-hCCCEEEECcCHHHHHHHHHHHHc---CCCeEEEEeCC
Confidence 3445 67789999954 788888888763 47888888864
No 437
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=25.80 E-value=2.2e+02 Score=19.25 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=22.8
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
.++.+++..+...+..-....-|.+.|.-.|-.++ |.++|.
T Consensus 40 ~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~sia---ANKv~G 80 (171)
T PRK08622 40 THYPIFGKKVGEAVASGEADLGVCICGTGVGISNA---VNKVPG 80 (171)
T ss_pred CChHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHHH---HhcCCC
Confidence 46777888777777553122334555555554433 445554
No 438
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=25.79 E-value=1.9e+02 Score=18.70 Aligned_cols=47 Identities=13% Similarity=0.080 Sum_probs=29.7
Q ss_pred hHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 35 KPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
.++.++++.. +.+.++++|-+....+...+...+..-.+-.++.+..
T Consensus 88 t~l~~~L~~~-gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~ 134 (155)
T cd01014 88 TDLEEWLREA-GIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADAC 134 (155)
T ss_pred CCHHHHHHHC-CCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccc
Confidence 4677888887 8899999999987665444433222234444544443
No 439
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=25.74 E-value=2.6e+02 Score=20.15 Aligned_cols=18 Identities=11% Similarity=-0.025 Sum_probs=14.4
Q ss_pred EEeeChhHHHHHHHHHhC
Q 026718 52 LVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 52 lvGhS~Gg~~a~~~a~~~ 69 (234)
+=||++||.+.+.++..+
T Consensus 105 v~G~a~GgG~~lala~D~ 122 (260)
T PRK07511 105 VEGAAAGAGFSLALACDL 122 (260)
T ss_pred ECCeeehHHHHHHHhCCE
Confidence 459999999988887643
No 440
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=25.62 E-value=1.4e+02 Score=19.04 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=22.2
Q ss_pred HHHHHHhcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 37 LIDFMAALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 37 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
+.++.+.+...++++++|......++..++.+.
T Consensus 3 ~~~~a~~~~~~~~i~~~G~G~s~~~a~e~~~kl 35 (153)
T cd05009 3 IKELAEKLKEAKSFYVLGRGPNYGTALEGALKL 35 (153)
T ss_pred HHHHHHHHhccCcEEEEcCCCCHHHHHHHHHHH
Confidence 344444444568899998877777777777654
No 441
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.46 E-value=1.6e+02 Score=21.99 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=26.4
Q ss_pred hhHHHHHHHhcC---CCCceEEEeeC--hhHHHHHHHHHh
Q 026718 34 FKPLIDFMAALP---LDKKVILVGHS--YGGLAVAQSMER 68 (234)
Q Consensus 34 ~~~l~~~l~~~~---~~~~~~lvGhS--~Gg~~a~~~a~~ 68 (234)
+.-+.+++++.+ ..+++.++|.| ||..++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 455667777651 46789999986 899999988764
No 442
>PF10763 DUF2584: Protein of unknown function (DUF2584); InterPro: IPR019699 This entry is represented by Bacteriophage 0305phi8-36, Orf221. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; PDB: 2NWA_F.
Probab=25.45 E-value=13 Score=21.05 Aligned_cols=14 Identities=14% Similarity=0.460 Sum_probs=7.1
Q ss_pred CCCCCceEEeecCC
Q 026718 2 IKSSGHNVTAFDLA 15 (234)
Q Consensus 2 l~~~g~~vi~~D~~ 15 (234)
|.+.|||++.+|-|
T Consensus 27 l~KeGYRiyPldvP 40 (80)
T PF10763_consen 27 LEKEGYRIYPLDVP 40 (80)
T ss_dssp EEEES-EE--SSSE
T ss_pred EEeCcEEEEeccCc
Confidence 34567888877754
No 443
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=25.42 E-value=53 Score=21.49 Aligned_cols=18 Identities=28% Similarity=0.434 Sum_probs=16.0
Q ss_pred eChhHHHHHHHHHhCCcc
Q 026718 55 HSYGGLAVAQSMERFPNK 72 (234)
Q Consensus 55 hS~Gg~~a~~~a~~~p~~ 72 (234)
..||+.+|..+-.++|+.
T Consensus 29 g~mG~GIA~~~k~~~P~~ 46 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQI 46 (154)
T ss_pred CcCChHHHHHHHHHcChH
Confidence 489999999999999964
No 444
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=25.32 E-value=2.2e+02 Score=19.07 Aligned_cols=50 Identities=16% Similarity=0.113 Sum_probs=33.4
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeC-hhHHHHHHHHHhCC-cccceeEEe
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHS-YGGLAVAQSMERFP-NKISVAVFV 79 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p-~~v~~lvl~ 79 (234)
++.+.+++-+.++++.. + ..++|+|++ .|+.++-.+|.+.. ..+..++-+
T Consensus 74 ~~~~~~a~~l~~~i~~~-~-p~~Vl~g~t~~g~~la~rlA~~L~~~~vsdv~~l 125 (181)
T cd01985 74 YDPEATAKALAALIKKE-K-PDLILAGATSIGKQLAPRVAALLGVPQISDVTKL 125 (181)
T ss_pred CChHHHHHHHHHHHHHh-C-CCEEEECCcccccCHHHHHHHHhCCCcceeEEEE
Confidence 67888888899998876 4 567777755 45567777777642 234444433
No 445
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=24.89 E-value=30 Score=24.34 Aligned_cols=13 Identities=31% Similarity=0.452 Sum_probs=11.5
Q ss_pred CCCCCceEEeecC
Q 026718 2 IKSSGHNVTAFDL 14 (234)
Q Consensus 2 l~~~g~~vi~~D~ 14 (234)
|+++||+|+++|+
T Consensus 61 LA~~G~~V~GvDl 73 (226)
T PRK13256 61 FLSKGVKVIGIEL 73 (226)
T ss_pred HHhCCCcEEEEec
Confidence 5788999999998
No 446
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=24.79 E-value=1.5e+02 Score=21.36 Aligned_cols=17 Identities=12% Similarity=0.090 Sum_probs=13.9
Q ss_pred CCceEEeecCCCCCCCC
Q 026718 5 SGHNVTAFDLAASGVEP 21 (234)
Q Consensus 5 ~g~~vi~~D~~G~G~S~ 21 (234)
.|..+..+|.||.+.+.
T Consensus 77 ~g~~i~vIDTPGl~~~~ 93 (249)
T cd01853 77 DGFKLNIIDTPGLLESV 93 (249)
T ss_pred CCeEEEEEECCCcCcch
Confidence 46788999999998763
No 447
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=24.61 E-value=1.6e+02 Score=19.49 Aligned_cols=50 Identities=14% Similarity=0.158 Sum_probs=33.3
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeC-hhHHHHHHHHHhCC-cccceeEEe
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHS-YGGLAVAQSMERFP-NKISVAVFV 79 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p-~~v~~lvl~ 79 (234)
++.+.+++-+.+++++. + ..++|+|+| .|.-++-.+|.+.. ..+..++-+
T Consensus 66 ~~~~~~a~al~~~i~~~-~-p~~Vl~~~t~~g~~la~rlAa~L~~~~vtdv~~l 117 (168)
T cd01715 66 YLAEPYAPALVALAKKE-K-PSHILAGATSFGKDLAPRVAAKLDVGLISDVTAL 117 (168)
T ss_pred cChHHHHHHHHHHHHhc-C-CCEEEECCCccccchHHHHHHHhCCCceeeEEEE
Confidence 57788888899998876 4 567777765 45567777777653 234444434
No 448
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional
Probab=24.59 E-value=1.1e+02 Score=25.36 Aligned_cols=37 Identities=14% Similarity=0.186 Sum_probs=29.2
Q ss_pred eecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEe
Q 026718 11 AFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVG 54 (234)
Q Consensus 11 ~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 54 (234)
.+.-||+|++ .|++++-...|.+-..+| ..=++.++|
T Consensus 518 yISCPsCGRT------LfDLq~tta~Ik~~t~HL-kGlkI~IMG 554 (611)
T PRK02048 518 YISCPGCGRT------LYDLQSTIARIKEATSHL-KGLKIGIMG 554 (611)
T ss_pred EEECCCCCcc------hhhHHHHHHHHHHHhCCC-CCceEEEEE
Confidence 3556888887 488999999999888888 666777776
No 449
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=24.29 E-value=2e+02 Score=18.27 Aligned_cols=26 Identities=4% Similarity=0.100 Sum_probs=18.9
Q ss_pred CCCCceEEEeeChhHHHHHHHHHhCC
Q 026718 45 PLDKKVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 45 ~~~~~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
....+++++|..-.+.++.+++.+..
T Consensus 33 ~~gg~i~~~G~G~S~~~a~~~~~~~~ 58 (138)
T PF13580_consen 33 RNGGRIFVCGNGHSAAIASHFAADLG 58 (138)
T ss_dssp HTT--EEEEESTHHHHHHHHHHHHHH
T ss_pred HCCCEEEEEcCchhhhHHHHHHHHHh
Confidence 36789999998877788888887653
No 450
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=23.83 E-value=2.7e+02 Score=19.69 Aligned_cols=54 Identities=19% Similarity=0.074 Sum_probs=36.3
Q ss_pred cEEEEeeCCCccccHHHHHHHHHhC----CCCcEEEccCCCcceeecChHHHHHHHHHHh
Q 026718 175 RRVYIISEKDLVTEKDLAMWMIKRN----PPHQVEEIKDSDHMVMMSKPLELWAHLLSIA 230 (234)
Q Consensus 175 P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 230 (234)
-.++|..+-|+. ..+.+.++.+.+ .+.+-.-+| -||.+-.-+++.+.+.+.+-+
T Consensus 59 DlvlIATDaD~~-GReLA~kf~eeLrg~VGhiERmK~P-iGHDvEhiD~elvrkEl~nAl 116 (290)
T COG4026 59 DLVLIATDADRV-GRELAEKFFEELRGMVGHIERMKIP-IGHDVEHIDVELVRKELKNAL 116 (290)
T ss_pred CEEEEeecCcch-hHHHHHHHHHHHHHhhhhhheeccC-CCCCccccCHHHHHHHHHHHH
Confidence 456666666654 455555555444 456777889 999988778888877776554
No 451
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=23.73 E-value=97 Score=16.35 Aligned_cols=18 Identities=11% Similarity=0.113 Sum_probs=12.9
Q ss_pred ecChHHHHHHHHHHhhcc
Q 026718 216 MSKPLELWAHLLSIAGNY 233 (234)
Q Consensus 216 ~~~p~~~~~~i~~fl~~~ 233 (234)
-|=|+.+.+.+.+|++.|
T Consensus 4 aeiPe~L~~~m~~fie~h 21 (57)
T PF10929_consen 4 AEIPEDLHQAMKDFIETH 21 (57)
T ss_pred ccccHHHHHHHHHHHHcC
Confidence 355777788888887765
No 452
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=23.57 E-value=1.7e+02 Score=17.30 Aligned_cols=26 Identities=12% Similarity=0.271 Sum_probs=17.6
Q ss_pred hhhhhhHHHHHHHhcCCCCceEEEeeC
Q 026718 30 ISDFFKPLIDFMAALPLDKKVILVGHS 56 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~~~~~~~~lvGhS 56 (234)
.....+.+.++++.. ....+.|.||+
T Consensus 15 ~~~~L~~~a~~l~~~-~~~~i~I~Ght 40 (104)
T TIGR02802 15 AQAILDAHAAYLKKN-PSVRVTIEGHT 40 (104)
T ss_pred HHHHHHHHHHHHHHC-CCcEEEEEEec
Confidence 344555566777766 55578999997
No 453
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=23.46 E-value=2.5e+02 Score=19.20 Aligned_cols=24 Identities=17% Similarity=0.135 Sum_probs=20.4
Q ss_pred CCCceEEEeeChhHHHHHHHHHhC
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
..++++++|..-.+.+|..++...
T Consensus 43 ~~~rI~i~G~G~S~~~A~~~a~~l 66 (192)
T PRK00414 43 AGGKVLSCGNGGSHCDAMHFAEEL 66 (192)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHh
Confidence 568999999999999999988654
No 454
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=23.44 E-value=2.4e+02 Score=19.02 Aligned_cols=41 Identities=17% Similarity=0.153 Sum_probs=22.4
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
.++.+++..+...+..-....-|.+.|.-.|-.+ .|.++|.
T Consensus 40 ~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~si---aANK~~G 80 (171)
T PRK12615 40 THYPIFGKKVGEAVVNGQADLGVCICGTGVGINN---AVNKVPG 80 (171)
T ss_pred CChHHHHHHHHHHHHcCCCCEEEEEcCCcHHHHH---HHhcCCC
Confidence 3577788777777755412233445555555443 3445554
No 455
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=23.44 E-value=51 Score=25.01 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=21.1
Q ss_pred ecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEe
Q 026718 12 FDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVG 54 (234)
Q Consensus 12 ~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 54 (234)
+.-|++|++. +++...++.+.+.+.++...=++.++|
T Consensus 269 ISCPtCGRt~------~Dl~~~~~~ie~~l~~l~~~lkIAVMG 305 (359)
T PF04551_consen 269 ISCPTCGRTE------FDLQELVAEIEERLKHLKKGLKIAVMG 305 (359)
T ss_dssp EE----TT--------SHHHHHHHHHHHHCCCHHCG-EEEEES
T ss_pred eeCCCCCCcc------chHHHHHHHHHHHHhcCCCCceEEEEe
Confidence 3478888874 788888888888887772234556655
No 456
>KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only]
Probab=23.16 E-value=91 Score=24.66 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=22.1
Q ss_pred CCchhhhhhHHHHHHHhcCCCCceEEEeeChhHH
Q 026718 27 LRSISDFFKPLIDFMAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 27 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~ 60 (234)
..-+..+.+++..++.+- .+-++++||.||.
T Consensus 88 L~~l~~~c~~~~~WL~~d---~~nVvvvHCk~Gk 118 (434)
T KOG2283|consen 88 LELLCPFCKSMDNWLSED---PKNVVVVHCKAGK 118 (434)
T ss_pred HHHHHHHHHCHHHHHhcC---ccceEEEEccCCC
Confidence 345666777888888764 4556689999885
No 457
>PF12083 DUF3560: Domain of unknown function (DUF3560); InterPro: IPR021944 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.
Probab=23.10 E-value=83 Score=19.86 Aligned_cols=21 Identities=29% Similarity=0.301 Sum_probs=13.5
Q ss_pred hHHHHHHHhcCCCCceEEEeeC
Q 026718 35 KPLIDFMAALPLDKKVILVGHS 56 (234)
Q Consensus 35 ~~l~~~l~~~~~~~~~~lvGhS 56 (234)
.......+.+ ..+..+||||.
T Consensus 30 ~~a~~~~~~i-p~GQPIlVGHH 50 (126)
T PF12083_consen 30 EAANRMAEAI-PFGQPILVGHH 50 (126)
T ss_pred HHHHHHHhcc-CCCCCeecccc
Confidence 3444555666 56788889853
No 458
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.
Probab=23.06 E-value=1.4e+02 Score=20.68 Aligned_cols=35 Identities=14% Similarity=0.014 Sum_probs=19.5
Q ss_pred CCceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 47 DKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
.+-++++|.|+--..+..+......+-..++++++
T Consensus 156 aDlllviGTSl~V~pa~~l~~~~~~~g~~vi~iN~ 190 (206)
T cd01410 156 ADLFLCLGTSLQVTPAANLPLKAARAGGRLVIVNL 190 (206)
T ss_pred CCEEEEECcCceehhHHHHHHHHHhcCCeEEEECC
Confidence 35566677776666555555433333445566664
No 459
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes the FAD binding domain which has a nested NADH binding domain and is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3IC9_A 1Q1W_A 3LB8_A 1Q1R_B 3GD4_A 1GV4_A 3GD3_A 2EQ9_E 2EQ6_B 2EQ8_E ....
Probab=23.06 E-value=1e+02 Score=20.66 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=20.4
Q ss_pred ceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 49 KVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 49 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
++++||-+.+|+.+...+... -..+++++
T Consensus 1 ~vvIIGgG~aGl~aA~~l~~~---~~~v~ii~ 29 (201)
T PF07992_consen 1 DVVIIGGGPAGLSAALELARP---GAKVLIIE 29 (201)
T ss_dssp EEEEESSSHHHHHHHHHHHHT---TSEEEEES
T ss_pred CEEEEecHHHHHHHHHHHhcC---CCeEEEEe
Confidence 578999999999877777633 23455553
No 460
>PF06107 DUF951: Bacterial protein of unknown function (DUF951); InterPro: IPR009296 This family consists of several short hypothetical bacterial proteins of unknown function.
Probab=22.97 E-value=1e+02 Score=16.27 Aligned_cols=23 Identities=9% Similarity=0.154 Sum_probs=14.8
Q ss_pred ccCCCcceeecChHHHHHHHHHHh
Q 026718 207 IKDSDHMVMMSKPLELWAHLLSIA 230 (234)
Q Consensus 207 ~~~~gH~~~~~~p~~~~~~i~~fl 230 (234)
-.++||.+++.+++ |...+...+
T Consensus 34 C~gCg~~imlpR~~-feK~~Kkvi 56 (57)
T PF06107_consen 34 CLGCGRQIMLPRSK-FEKRLKKVI 56 (57)
T ss_pred ECCCCCEEEEeHHH-HHHHHHHhc
Confidence 34699999887654 555555443
No 461
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional
Probab=22.86 E-value=3.6e+02 Score=20.83 Aligned_cols=41 Identities=10% Similarity=-0.075 Sum_probs=31.8
Q ss_pred CCchhhhhhHHHHHHHhcCCCCceEEEeeChhH-HHHHHHHHhC
Q 026718 27 LRSISDFFKPLIDFMAALPLDKKVILVGHSYGG-LAVAQSMERF 69 (234)
Q Consensus 27 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg-~~a~~~a~~~ 69 (234)
.|..+.+++.+.+++++. . ..++|+|+|.=| -++-.+|.+.
T Consensus 99 ~y~~e~~a~al~~li~~~-~-P~~vL~~~T~~GrdlApRlAarL 140 (356)
T PLN00022 99 HPLAEPWAKLVVLAQQKG-G-YSHILAASTSFGKNVLPRAAALL 140 (356)
T ss_pred ccChHHHHHHHHHHHHhc-C-CCEEEECCCCchhHHHHHHHHHh
Confidence 367889999999999987 4 577788777665 5888887765
No 462
>PLN02366 spermidine synthase
Probab=22.80 E-value=3.2e+02 Score=20.54 Aligned_cols=33 Identities=27% Similarity=0.456 Sum_probs=22.0
Q ss_pred CCCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 45 PLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 45 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
...+++.++|-.-|+. +..+ .++| .+.++++++
T Consensus 90 ~~pkrVLiIGgG~G~~-~rel-lk~~-~v~~V~~VE 122 (308)
T PLN02366 90 PNPKKVLVVGGGDGGV-LREI-ARHS-SVEQIDICE 122 (308)
T ss_pred CCCCeEEEEcCCccHH-HHHH-HhCC-CCCeEEEEE
Confidence 3678899999887775 3344 4665 366776665
No 463
>PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2.7.4.8 from EC) (GK) [] catalyzes the ATP-dependent phosphorylation of GMP into GDP. It is essential for recycling GMP and indirectly, cGMP. In prokaryotes (such as Escherichia coli), lower eukaryotes (such as yeast) and in vertebrates, GK is a highly conserved monomeric protein of about 200 amino acids. GK has been shown [, , ] to be structurally similar to protein A57R (or SalG2R) from various strains of Vaccinia virus. Proteins containing one or more copies of the DHR domain, an SH3 domain as well as a C-terminal GK-like domain, are collectively termed MAGUKs (membrane-associated guanylate kinase homologs) [], and include Drosophila lethal(1)discs large-1 tumor suppressor protein (gene dlg1); mammalian tight junction protein Zo-1; a family of mammalian synaptic proteins that seem to interact with the cytoplasmic tail of NMDA receptor subunits (SAP90/PSD-95, CHAPSYN-110/PSD-93, SAP97/DLG1 and SAP102); vertebrate 55kDa erythrocyte membrane protein (p55); Caenorhabditis elegans protein lin-2; rat protein CASK; and human proteins DLG2 and DLG3. There is an ATP-binding site (P-loop) in the N-terminal section of GK, which is not conserved in the GK-like domain of the above proteins. However these proteins retain the residues known, in GK, to be involved in the binding of GMP.; GO: 0005515 protein binding; PDB: 3UAT_A 3KFV_A 2ANC_F 2F3T_E 2ANB_A 2AN9_A 1S96_A 2F3R_B 3TR0_A 1LVG_A ....
Probab=22.71 E-value=1.8e+02 Score=19.49 Aligned_cols=38 Identities=26% Similarity=0.453 Sum_probs=26.8
Q ss_pred CCceEEEeeChhHH--HHHHHHHhCCcccceeEEeccCCC
Q 026718 47 DKKVILVGHSYGGL--AVAQSMERFPNKISVAVFVSALKP 84 (234)
Q Consensus 47 ~~~~~lvGhS~Gg~--~a~~~a~~~p~~v~~lvl~~~~~~ 84 (234)
.++++|+|-|-.|- ++-.+...+|+++...+...+-.+
T Consensus 2 ~r~ivl~Gpsg~GK~~l~~~L~~~~~~~~~~~v~~TTR~~ 41 (183)
T PF00625_consen 2 RRPIVLVGPSGSGKSTLAKRLIQEFPDKFGRVVSHTTRPP 41 (183)
T ss_dssp SSEEEEESSTTSSHHHHHHHHHHHSTTTEEEEEEEESS-G
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhcccccccceeecccCC
Confidence 46789999998875 555577788998876666654433
No 464
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=22.64 E-value=1.3e+02 Score=23.09 Aligned_cols=40 Identities=10% Similarity=0.026 Sum_probs=24.9
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL 44 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~ 44 (234)
|.++||.|+.+-+..+..+. . ...+.++...|...+.+.+
T Consensus 23 Lk~QGyeViGl~m~~~~~~~-~--~~C~s~~d~~da~~va~~L 62 (356)
T COG0482 23 LKEQGYEVIGLFMKNWDEDG-G--GGCCSEEDLRDAERVADQL 62 (356)
T ss_pred HHHcCCeEEEEEEEeeccCC-C--CcCCchhHHHHHHHHHHHh
Confidence 56789999999988776411 1 1134445555566666655
No 465
>COG2344 AT-rich DNA-binding protein [General function prediction only]
Probab=22.60 E-value=1.1e+02 Score=21.03 Aligned_cols=29 Identities=17% Similarity=0.140 Sum_probs=20.7
Q ss_pred CCchhhhhhHHHHHHHhcCCCCceEEEeeC
Q 026718 27 LRSISDFFKPLIDFMAALPLDKKVILVGHS 56 (234)
Q Consensus 27 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS 56 (234)
.|+.+.+.+.+.+++..- ...++++||-.
T Consensus 65 GYnV~~L~~ff~~~Lg~~-~~tnviiVG~G 93 (211)
T COG2344 65 GYNVKYLRDFFDDLLGQD-KTTNVIIVGVG 93 (211)
T ss_pred CccHHHHHHHHHHHhCCC-cceeEEEEccC
Confidence 477877777776666554 56789999854
No 466
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=22.48 E-value=3.5e+02 Score=20.45 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=36.7
Q ss_pred CCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhc--CCCCceEEEeeChhHHHHHHHHHhCC--cccceeEEe
Q 026718 4 SSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAAL--PLDKKVILVGHSYGGLAVAQSMERFP--NKISVAVFV 79 (234)
Q Consensus 4 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~ 79 (234)
.++|.++.+|-+|..... ...-+....+..+++.+ .....+++|-.+..|.-++.-+..+- -.+.++|+-
T Consensus 194 ~~~~D~ViIDTaGr~~~~------~~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~~~~~giIlT 267 (318)
T PRK10416 194 ARGIDVLIIDTAGRLHNK------TNLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEAVGLTGIILT 267 (318)
T ss_pred hCCCCEEEEeCCCCCcCC------HHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhhCCCCEEEEE
Confidence 467999999999885432 12222223334444332 12344566666666665555444432 235555544
No 467
>PLN02962 hydroxyacylglutathione hydrolase
Probab=22.44 E-value=1.4e+02 Score=21.51 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=14.8
Q ss_pred chhhhhhHHHHHHHhcCCCCceEEEeeCh
Q 026718 29 SISDFFKPLIDFMAALPLDKKVILVGHSY 57 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~ 57 (234)
+..++.+.+...+..+ ..+..++-||.+
T Consensus 166 ~~~~l~~Sl~~~l~~L-~~~~~i~PGHg~ 193 (251)
T PLN02962 166 SSDQLYKSVHSQIFTL-PKDTLIYPAHDY 193 (251)
T ss_pred CHHHHHHHHHHHHHcC-CCCeEEECCCCC
Confidence 3444555555455555 444556666664
No 468
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=22.26 E-value=1.1e+02 Score=22.69 Aligned_cols=22 Identities=36% Similarity=0.478 Sum_probs=16.3
Q ss_pred ceEEEeeChhHHHHHHHHHhCC
Q 026718 49 KVILVGHSYGGLAVAQSMERFP 70 (234)
Q Consensus 49 ~~~lvGhS~Gg~~a~~~a~~~p 70 (234)
+|++||-+.+|..+..+.++..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G 24 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAG 24 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHhcc
Confidence 6899999999998777777654
No 469
>PF12165 DUF3594: Domain of unknown function (DUF3594); InterPro: IPR021998 This presumed domain is functionally uncharacterised.This domain family is found in eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF00628 from PFAM.
Probab=22.25 E-value=1.5e+02 Score=18.73 Aligned_cols=31 Identities=19% Similarity=0.371 Sum_probs=22.8
Q ss_pred hhhhhhHHHHHHHhc-CCCCceEEEeeChhHH
Q 026718 30 ISDFFKPLIDFMAAL-PLDKKVILVGHSYGGL 60 (234)
Q Consensus 30 ~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~ 60 (234)
+..+..|+.++.++- +..+...|.||+-|..
T Consensus 18 v~ALT~dve~Fy~~CDP~kenLCLYG~p~~~W 49 (137)
T PF12165_consen 18 VRALTTDVEEFYQQCDPEKENLCLYGHPDGTW 49 (137)
T ss_pred HHHHHHHHHHHHHhcCccccceEEecCCCCCe
Confidence 455667777777766 3456799999999876
No 470
>cd02908 Macro_Appr_pase_like Macro domain, Appr-1"-pase_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family is composed of uncharacterized proteins that show similarity to Appr-1"-pase, containing conserved putative active site residues. Appr-1"-pase is a phosphatase specific for ADP-ribose-1"-monophosphate.
Probab=22.12 E-value=2.2e+02 Score=18.83 Aligned_cols=29 Identities=7% Similarity=0.135 Sum_probs=15.6
Q ss_pred chhhhhhHHHHHHHhcCCCCceEEEeeChh
Q 026718 29 SISDFFKPLIDFMAALPLDKKVILVGHSYG 58 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~G 58 (234)
.+.+-...+.+..+.. +.+.+.+=+-|.|
T Consensus 89 ~L~~~~~~~L~~a~~~-~~~sIa~P~igtG 117 (165)
T cd02908 89 LLASCYRNSLELAREN-GLRSIAFPAISTG 117 (165)
T ss_pred HHHHHHHHHHHHHHHc-CCCEEEECceecC
Confidence 4455555555555555 6677665444433
No 471
>PRK12570 N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=22.08 E-value=2.3e+02 Score=21.11 Aligned_cols=27 Identities=15% Similarity=0.169 Sum_probs=19.8
Q ss_pred hcCCCCceEEEeeChhHHHHHHHHHhC
Q 026718 43 ALPLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 43 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
.+...++++++|..-.|.++...|...
T Consensus 54 ~l~~ggrl~~~GaG~Sg~la~~dA~e~ 80 (296)
T PRK12570 54 AFKKGGRLIYMGAGTSGRLGVLDASEC 80 (296)
T ss_pred HHHcCCeEEEECCchhHHHHHHHHHhC
Confidence 344668899999988888866665544
No 472
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=22.08 E-value=3.6e+02 Score=21.42 Aligned_cols=40 Identities=33% Similarity=0.382 Sum_probs=28.6
Q ss_pred CchhhhhhHHHHHHHh-cCCCCceEEEeeC-hhHHHHHHHHHh
Q 026718 28 RSISDFFKPLIDFMAA-LPLDKKVILVGHS-YGGLAVAQSMER 68 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~-~~~~~~~~lvGhS-~Gg~~a~~~a~~ 68 (234)
.|+...+-++..-+-. + ..+++.++|.+ ||..++-.++..
T Consensus 159 VSi~saAv~lA~~~~~~L-~~~~vlvIGAGem~~lva~~L~~~ 200 (414)
T COG0373 159 VSISSAAVELAKRIFGSL-KDKKVLVIGAGEMGELVAKHLAEK 200 (414)
T ss_pred cchHHHHHHHHHHHhccc-ccCeEEEEcccHHHHHHHHHHHhC
Confidence 4666666665544333 5 67889999999 888888887764
No 473
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=22.06 E-value=40 Score=23.55 Aligned_cols=13 Identities=31% Similarity=0.659 Sum_probs=11.4
Q ss_pred CCCCCceEEeecC
Q 026718 2 IKSSGHNVTAFDL 14 (234)
Q Consensus 2 l~~~g~~vi~~D~ 14 (234)
|+++||.|+++|.
T Consensus 55 LA~~G~~V~avD~ 67 (218)
T PRK13255 55 LAEQGHEVLGVEL 67 (218)
T ss_pred HHhCCCeEEEEcc
Confidence 5788999999998
No 474
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=22.01 E-value=2.8e+02 Score=19.13 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=27.4
Q ss_pred HhcCCCCceEEEeeC-hhHHHHHHHHHhCCcccceeEEeccC
Q 026718 42 AALPLDKKVILVGHS-YGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 42 ~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
+.+ ...++.++|-. +|+.++..++.. -+..+.+++.-
T Consensus 17 ~kl-~~~~VlviG~GglGs~ia~~La~~---Gv~~i~lvD~d 54 (202)
T TIGR02356 17 QRL-LNSHVLIIGAGGLGSPAALYLAGA---GVGTIVIVDDD 54 (202)
T ss_pred HHh-cCCCEEEECCCHHHHHHHHHHHHc---CCCeEEEecCC
Confidence 345 67889999965 777787777763 47889999874
No 475
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=22.00 E-value=1.8e+02 Score=23.65 Aligned_cols=49 Identities=22% Similarity=0.190 Sum_probs=30.7
Q ss_pred hHHHHHHHhc-CCCCceEEEeeChhHH-HHHHHHHh-CCcccceeEEeccCC
Q 026718 35 KPLIDFMAAL-PLDKKVILVGHSYGGL-AVAQSMER-FPNKISVAVFVSALK 83 (234)
Q Consensus 35 ~~l~~~l~~~-~~~~~~~lvGhS~Gg~-~a~~~a~~-~p~~v~~lvl~~~~~ 83 (234)
+.+.+-|... ++.+++.|+|-|.|+. +.+++.+- -...++..|+-++..
T Consensus 204 ~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~ 255 (601)
T KOG4389|consen 204 QWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSL 255 (601)
T ss_pred HHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCC
Confidence 4455556566 4567899999999997 44444331 113466667666554
No 476
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=21.81 E-value=82 Score=21.86 Aligned_cols=17 Identities=24% Similarity=0.323 Sum_probs=14.1
Q ss_pred CceEEEeeChhHHHHHH
Q 026718 48 KKVILVGHSYGGLAVAQ 64 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~ 64 (234)
+...++|.|.|+.+...
T Consensus 113 ~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 113 RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred CCCEEEEECHhHHhhCC
Confidence 45789999999987765
No 477
>PRK04457 spermidine synthase; Provisional
Probab=21.73 E-value=3.2e+02 Score=19.82 Aligned_cols=46 Identities=13% Similarity=0.281 Sum_probs=26.0
Q ss_pred hhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeEEec
Q 026718 32 DFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVS 80 (234)
Q Consensus 32 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 80 (234)
.+.+.+...+......+++..+|-.. |.++..++...|+ ..++.++
T Consensus 52 ~y~~~m~~~l~~~~~~~~vL~IG~G~-G~l~~~l~~~~p~--~~v~~VE 97 (262)
T PRK04457 52 AYTRAMMGFLLFNPRPQHILQIGLGG-GSLAKFIYTYLPD--TRQTAVE 97 (262)
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCCH-hHHHHHHHHhCCC--CeEEEEE
Confidence 45554444443333456788888764 4456666666664 3344444
No 478
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=21.66 E-value=2.5e+02 Score=18.49 Aligned_cols=41 Identities=12% Similarity=0.174 Sum_probs=24.3
Q ss_pred CchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCc
Q 026718 28 RSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPN 71 (234)
Q Consensus 28 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 71 (234)
.++.+++..+...+..-....-+.+.|..+|-.++ |.++|.
T Consensus 44 ~dYp~~a~~va~~V~~~~~~~GIliCGtGiG~sia---ANK~~G 84 (151)
T PTZ00215 44 VDYPDFAEKVCEEVLKGEADTGILVCGSGIGISIA---ANKVKG 84 (151)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEEEcCCcHHHHHH---HhcCCC
Confidence 46777888777777554222345666666665543 445554
No 479
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=21.65 E-value=43 Score=23.32 Aligned_cols=13 Identities=31% Similarity=0.644 Sum_probs=11.4
Q ss_pred CCCCCceEEeecC
Q 026718 2 IKSSGHNVTAFDL 14 (234)
Q Consensus 2 l~~~g~~vi~~D~ 14 (234)
|+++||.|+++|.
T Consensus 52 LA~~G~~V~gvD~ 64 (213)
T TIGR03840 52 LAEQGHRVLGVEL 64 (213)
T ss_pred HHhCCCeEEEEeC
Confidence 5788999999998
No 480
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.64 E-value=1.7e+02 Score=19.83 Aligned_cols=31 Identities=26% Similarity=0.172 Sum_probs=22.3
Q ss_pred hhHHHHHHHhcCCCCceEEEeeChhHHHHHHH
Q 026718 34 FKPLIDFMAALPLDKKVILVGHSYGGLAVAQS 65 (234)
Q Consensus 34 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~ 65 (234)
...+.-.+..+ +.+.++++|||-=|.+...+
T Consensus 68 ~asleyAv~~L-~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 68 LSVLQYAVDVL-KVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhHHHHHHhc-CCCEEEEecCCCchHHHHHH
Confidence 34455566677 88999999999877655443
No 481
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=21.51 E-value=1.8e+02 Score=19.91 Aligned_cols=14 Identities=0% Similarity=0.221 Sum_probs=7.7
Q ss_pred CccEEEEeeCCCcc
Q 026718 173 TVRRVYIISEKDLV 186 (234)
Q Consensus 173 ~~P~l~i~g~~D~~ 186 (234)
++|++++.-.+...
T Consensus 101 ~lpviivV~NN~~y 114 (202)
T cd02006 101 RIPYIHVLVNNAYL 114 (202)
T ss_pred CCCeEEEEEeCchH
Confidence 55666665555543
No 482
>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....
Probab=21.50 E-value=2.5e+02 Score=20.31 Aligned_cols=47 Identities=13% Similarity=0.187 Sum_probs=26.6
Q ss_pred chhhhhhHHHHHHHhcCCCCceEEEeeChhHHHHHHHHHhCCcccceeE
Q 026718 29 SISDFFKPLIDFMAALPLDKKVILVGHSYGGLAVAQSMERFPNKISVAV 77 (234)
Q Consensus 29 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lv 77 (234)
..+..++...+++..+ .++-..+|.|||-.+....-...+.....+.
T Consensus 34 ~~~~l~~~aA~~L~~~--l~~~~~iGv~wG~Tl~~~~~~l~~~~~~~~~ 80 (255)
T PF04198_consen 34 ILESLGEAAAEYLSEL--LKDGDVIGVGWGRTLYAVANHLPPKSLPNVT 80 (255)
T ss_dssp HHHHHHHHHHHHHHHH----TTEEEEE-TSHHHHHHHHTS--SSSSCEE
T ss_pred HHHHHHHHHHHHHHHh--CCCCCEEEEcchHHHHHHHHhcCccCCCCcE
Confidence 4666777777777775 3344489999999876554433333333343
No 483
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=21.42 E-value=1.4e+02 Score=19.08 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=23.2
Q ss_pred ceEEEee--ChhHHHHHHHHHhCCcccceeEEeccC
Q 026718 49 KVILVGH--SYGGLAVAQSMERFPNKISVAVFVSAL 82 (234)
Q Consensus 49 ~~~lvGh--S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 82 (234)
++.++|- ..|..+++.++.. ..++.++|++..
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~--~l~~ei~L~D~~ 35 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQ--GLADEIVLIDIN 35 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT--TTSSEEEEEESS
T ss_pred EEEEECCCChHHHHHHHHHHhC--CCCCceEEeccC
Confidence 6788887 5666677776665 567779999853
No 484
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=21.33 E-value=1.8e+02 Score=22.89 Aligned_cols=37 Identities=22% Similarity=0.453 Sum_probs=27.1
Q ss_pred CCCceEEEeeChhHHHHHHHHHhCCcccceeEEeccCC
Q 026718 46 LDKKVILVGHSYGGLAVAQSMERFPNKISVAVFVSALK 83 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 83 (234)
..++++++|-.+||..+..-..+.+ .=..+++++...
T Consensus 2 ~~~~iVIlGgGfgGl~~a~~l~~~~-~~~~itLVd~~~ 38 (405)
T COG1252 2 MKKRIVILGGGFGGLSAAKRLARKL-PDVEITLVDRRD 38 (405)
T ss_pred CCceEEEECCcHHHHHHHHHhhhcC-CCCcEEEEeCCC
Confidence 3578999999999997777776665 324478888643
No 485
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=21.32 E-value=2.2e+02 Score=20.13 Aligned_cols=11 Identities=27% Similarity=0.516 Sum_probs=7.4
Q ss_pred CCceEEeecCC
Q 026718 5 SGHNVTAFDLA 15 (234)
Q Consensus 5 ~g~~vi~~D~~ 15 (234)
.|..+-.+|++
T Consensus 56 ~g~~v~~idl~ 66 (219)
T TIGR02690 56 EGRETRIFDPP 66 (219)
T ss_pred cCCEEEEeCcc
Confidence 46777777764
No 486
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=21.15 E-value=2.4e+02 Score=18.82 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=19.2
Q ss_pred ccEEEEeeCCCccccHHHHHHHHHhCCCCcEEEcc
Q 026718 174 VRRVYIISEKDLVTEKDLAMWMIKRNPPHQVEEIK 208 (234)
Q Consensus 174 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 208 (234)
.++.+ .|..+.. -.+....+.+.+|+.+++-..
T Consensus 49 ~~ifl-lG~~~~~-~~~~~~~l~~~yP~l~ivg~~ 81 (172)
T PF03808_consen 49 KRIFL-LGGSEEV-LEKAAANLRRRYPGLRIVGYH 81 (172)
T ss_pred CeEEE-EeCCHHH-HHHHHHHHHHHCCCeEEEEec
Confidence 34444 4444433 235566777888887776554
No 487
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=21.09 E-value=2.5e+02 Score=22.41 Aligned_cols=43 Identities=16% Similarity=0.172 Sum_probs=29.4
Q ss_pred EEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHH
Q 026718 9 VTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGL 60 (234)
Q Consensus 9 vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~ 60 (234)
|+.|-.||--.| ..+++.++.+..++++ +.+.+.|.|...+++
T Consensus 161 CiiP~~RG~~rS-------r~~e~Il~ev~~Lv~~--G~kEI~L~gqdv~aY 203 (437)
T COG0621 161 CIIPYARGKERS-------RPPEDILKEVKRLVAQ--GVKEIVLTGQDVNAY 203 (437)
T ss_pred eeeeccCCCccC-------CCHHHHHHHHHHHHHC--CCeEEEEEEEehhhc
Confidence 344555554443 5788888888888876 678888888665554
No 488
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=21.02 E-value=1.5e+02 Score=16.84 Aligned_cols=27 Identities=0% Similarity=-0.001 Sum_probs=18.9
Q ss_pred CccEEEEeeCCCccccHHHHHHHHHhC
Q 026718 173 TVRRVYIISEKDLVTEKDLAMWMIKRN 199 (234)
Q Consensus 173 ~~P~l~i~g~~D~~~~~~~~~~~~~~~ 199 (234)
.-|+.++++.+...++....+.+.+.+
T Consensus 38 ~PPtFv~f~N~~~~~~~sY~ryL~n~l 64 (80)
T PF14714_consen 38 RPPTFVLFVNDPELLPESYKRYLENQL 64 (80)
T ss_dssp TTTEEEEEES-CCC--HHHHHHHHHHH
T ss_pred CCCEEEEEeCCcccCCHHHHHHHHHHH
Confidence 459999999998888888777776654
No 489
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=21.00 E-value=2.4e+02 Score=18.37 Aligned_cols=51 Identities=12% Similarity=0.123 Sum_probs=28.4
Q ss_pred CCCCCceEEeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeChhHHHH
Q 026718 2 IKSSGHNVTAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHSYGGLAV 62 (234)
Q Consensus 2 l~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a 62 (234)
|.++||.|+ |+ |. .+ ..++.+++..+.+.+..-....-+.+.|.-.|-.++
T Consensus 22 L~~~G~eV~--D~-G~--~~-----~~dYpd~a~~va~~V~~~~~~~GIliCGTGiG~sia 72 (142)
T PRK08621 22 LEDNKYEVV--DV-TE--EG-----AEDFVDSTLAVAKEVNKSEDNLGIVIDAYGAGSFMV 72 (142)
T ss_pred HHHCCCEEE--EC-CC--CC-----CCCcHHHHHHHHHHHHcCCCceEEEEcCCChhhhhh
Confidence 456788775 55 22 11 146777777777666543223345666666665443
No 490
>PF10116 Host_attach: Protein required for attachment to host cells; InterPro: IPR019291 Members of this family of bacterial proteins are required for the attachment of the bacterium to host cells [, ].
Probab=20.97 E-value=1.5e+02 Score=18.79 Aligned_cols=11 Identities=9% Similarity=-0.161 Sum_probs=6.2
Q ss_pred EeecCCCCCCC
Q 026718 10 TAFDLAASGVE 20 (234)
Q Consensus 10 i~~D~~G~G~S 20 (234)
+.-|-+|...+
T Consensus 42 l~~d~~Gr~~~ 52 (138)
T PF10116_consen 42 LVSDRPGRFHD 52 (138)
T ss_pred hccCCCCCCCC
Confidence 44566776444
No 491
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=20.64 E-value=1.4e+02 Score=20.46 Aligned_cols=24 Identities=21% Similarity=0.002 Sum_probs=13.8
Q ss_pred hhhHHHHHHHhcCCCCceEEEeeCh
Q 026718 33 FFKPLIDFMAALPLDKKVILVGHSY 57 (234)
Q Consensus 33 ~~~~l~~~l~~~~~~~~~~lvGhS~ 57 (234)
++.-+..+.++. +..+-.++|||-
T Consensus 135 L~~L~~~L~~~y-~i~~~~IvGH~d 158 (185)
T PRK11789 135 LAALTRALRAAY-PIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHc-CCCHHhEEehhh
Confidence 334444455555 444578999964
No 492
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=20.56 E-value=36 Score=23.29 Aligned_cols=13 Identities=46% Similarity=0.754 Sum_probs=10.6
Q ss_pred CCCCCceEEeecC
Q 026718 2 IKSSGHNVTAFDL 14 (234)
Q Consensus 2 l~~~g~~vi~~D~ 14 (234)
|+++||.|.++|.
T Consensus 48 LA~~G~~VtAvD~ 60 (192)
T PF03848_consen 48 LASQGFDVTAVDI 60 (192)
T ss_dssp HHHTT-EEEEEES
T ss_pred HHHCCCeEEEEEC
Confidence 5788999999998
No 493
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.54 E-value=2.1e+02 Score=17.60 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=15.1
Q ss_pred CCCceEEEeeChhHHHHHHHHHh
Q 026718 46 LDKKVILVGHSYGGLAVAQSMER 68 (234)
Q Consensus 46 ~~~~~~lvGhS~Gg~~a~~~a~~ 68 (234)
..+++.++|......++..++..
T Consensus 12 ~~~~i~i~g~g~s~~~a~~~~~~ 34 (139)
T cd05013 12 KARRIYIFGVGSSGLVAEYLAYK 34 (139)
T ss_pred hCCEEEEEEcCchHHHHHHHHHH
Confidence 34788888877665666655543
No 494
>PRK00694 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated
Probab=20.49 E-value=1.4e+02 Score=24.69 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=26.3
Q ss_pred eecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEe
Q 026718 11 AFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVG 54 (234)
Q Consensus 11 ~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 54 (234)
.+.-||+|++ .+++++.++.+.+...++ ..=++.++|
T Consensus 510 ~isCP~CgRt------lfdlq~t~~~i~~~t~Hl-~g~kIaiMG 546 (606)
T PRK00694 510 YISCPGCGRT------LFDLLEVTQRIRERTQHL-PGLKIAVMG 546 (606)
T ss_pred EEECCCCCce------eehHHHHHHHHHHHhccC-CCceEEEEE
Confidence 3456888877 377888888888877777 455666665
No 495
>PF03295 Pox_TAA1: Poxvirus trans-activator protein A1 C-terminal; InterPro: IPR004975 Late transcription factor VLTF-2, acts with RNA polymerase to initiate transcription from late gene promoters [].
Probab=20.47 E-value=1.2e+02 Score=16.18 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=12.1
Q ss_pred eeecChHHHHHHHHHH
Q 026718 214 VMMSKPLELWAHLLSI 229 (234)
Q Consensus 214 ~~~~~p~~~~~~i~~f 229 (234)
.+.++|+++.+.|...
T Consensus 21 v~Y~~Pe~Vi~iIN~l 36 (63)
T PF03295_consen 21 VFYEDPEEVINIINEL 36 (63)
T ss_pred eeccCHHHHHHHHHHh
Confidence 4678999998877653
No 496
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=20.41 E-value=1.6e+02 Score=23.22 Aligned_cols=33 Identities=27% Similarity=0.469 Sum_probs=23.4
Q ss_pred CceEEEeeChhHHHHHHHHHhCCcccceeEEecc
Q 026718 48 KKVILVGHSYGGLAVAQSMERFPNKISVAVFVSA 81 (234)
Q Consensus 48 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 81 (234)
.+++++|-+.||+.+...+.+.... ..+++++.
T Consensus 2 ~~VVIIGgG~aG~~aA~~l~~~~~~-~~I~li~~ 34 (438)
T PRK13512 2 PKIIVVGAVAGGATCASQIRRLDKE-SDIIIFEK 34 (438)
T ss_pred CeEEEECCcHHHHHHHHHHHhhCCC-CCEEEEEC
Confidence 4799999999999777776654222 35666764
No 497
>PRK13937 phosphoheptose isomerase; Provisional
Probab=20.33 E-value=2.9e+02 Score=18.74 Aligned_cols=25 Identities=12% Similarity=0.189 Sum_probs=18.5
Q ss_pred CCCCceEEEeeChhHHHHHHHHHhC
Q 026718 45 PLDKKVILVGHSYGGLAVAQSMERF 69 (234)
Q Consensus 45 ~~~~~~~lvGhS~Gg~~a~~~a~~~ 69 (234)
...++++++|..-.+.+|..++...
T Consensus 36 ~~a~rI~i~G~G~S~~~A~~~a~~~ 60 (188)
T PRK13937 36 ANGGKILLCGNGGSAADAQHIAAEL 60 (188)
T ss_pred HCCCEEEEEeCcHhHHHHHHHHHHh
Confidence 3668999999888888777665433
No 498
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc). Xsc plays a key role in the degradation of taurine, catalyzing the desulfonation of 2-sulfoacetaldehyde into sulfite and acetyl phosphate. This enzyme requires TPP and divalent metal ions for activity.
Probab=20.20 E-value=1.8e+02 Score=19.85 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=14.7
Q ss_pred CcceeecChHHHHHHHHHHhh
Q 026718 211 DHMVMMSKPLELWAHLLSIAG 231 (234)
Q Consensus 211 gH~~~~~~p~~~~~~i~~fl~ 231 (234)
.+....+.++++.+.+.+.+.
T Consensus 144 ~~~~~v~~~~el~~al~~a~~ 164 (196)
T cd02013 144 AKGITVDKPEDVGPALQKAIA 164 (196)
T ss_pred CEEEEECCHHHHHHHHHHHHh
Confidence 344566788888888877654
No 499
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional
Probab=20.18 E-value=2.7e+02 Score=21.39 Aligned_cols=54 Identities=9% Similarity=0.218 Sum_probs=0.0
Q ss_pred CCCCCCCCCchhhhhhHHHHHHHhc-CCCCceEEEeeChh-----HHHHHHHHHhC-Cccc
Q 026718 20 EPQQVHNLRSISDFFKPLIDFMAAL-PLDKKVILVGHSYG-----GLAVAQSMERF-PNKI 73 (234)
Q Consensus 20 S~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~G-----g~~a~~~a~~~-p~~v 73 (234)
|+...........+.+.+.+.+..+ ...++++++|...| ....-.+..++ |+|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~d~~iv~l~~D~~~~G~~~~~~~~f~~~fgP~R~ 84 (355)
T PTZ00182 24 SSTESKGATVKMNVREAINSALDEELARDPKVFVLGEDVAQYGGVYKCTKGLLDKYGPDRV 84 (355)
T ss_pred ccccccccccchHHHHHHHHHHHHHHhhCCCEEEEeCCccccCCchhhhHHHHHHhCCCce
No 500
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=20.17 E-value=2.1e+02 Score=19.15 Aligned_cols=63 Identities=16% Similarity=0.031 Sum_probs=0.0
Q ss_pred EeecCCCCCCCCCCCCCCCchhhhhhHHHHHHHhcCCCCceEEEeeC-hhHHHHHHHHHhCCccc
Q 026718 10 TAFDLAASGVEPQQVHNLRSISDFFKPLIDFMAALPLDKKVILVGHS-YGGLAVAQSMERFPNKI 73 (234)
Q Consensus 10 i~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~v 73 (234)
+..+..|...-.............++.+......+ ..+++.++|-+ |+|..+..+.....-.|
T Consensus 8 ~~~~~~~~~~~~~~~~~p~~~~a~v~l~~~~~~~l-~gk~vlViG~G~~~G~~~a~~L~~~g~~V 71 (168)
T cd01080 8 LHPVNLGRLALGRPGFIPCTPAGILELLKRYGIDL-AGKKVVVVGRSNIVGKPLAALLLNRNATV 71 (168)
T ss_pred CCccchhhHhcCCCCccCChHHHHHHHHHHcCCCC-CCCEEEEECCcHHHHHHHHHHHhhCCCEE
Done!