Query 026719
Match_columns 234
No_of_seqs 31 out of 33
Neff 3.2
Searched_HMMs 13730
Date Mon Mar 25 20:28:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026719.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026719hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1j2jb_ a.7.8.1 (B:) ADP-ribos 38.4 13 0.00095 23.5 3.0 27 177-204 9-38 (41)
2 d1lkvx_ a.118.14.1 (X:) FliG { 31.2 74 0.0054 23.0 7.0 37 92-128 1-37 (213)
3 d2crua1 a.5.6.1 (A:8-112) Prog 28.3 93 0.0068 22.3 6.9 42 174-215 43-90 (105)
4 d1s0pa_ a.192.1.1 (A:) N-termi 27.1 80 0.0058 24.4 6.8 43 92-135 55-97 (176)
5 d1rw6a_ a.47.4.1 (A:) CAPPD, a 23.4 1.5E+02 0.011 23.3 7.9 73 83-158 44-125 (192)
6 d1eija_ a.5.6.1 (A:) Hypotheti 23.0 68 0.0049 21.8 4.9 42 174-215 20-67 (72)
7 d1ez3a_ a.47.2.1 (A:) Syntaxin 22.3 83 0.0061 21.7 5.5 38 117-161 2-39 (124)
8 d1sqwa1 b.122.1.1 (A:95-170) N 19.6 14 0.001 26.0 0.6 16 1-16 42-57 (76)
9 d1zs3a1 a.25.1.1 (A:3-173) Dod 19.6 1.7E+02 0.013 21.9 7.8 94 126-233 38-147 (171)
10 d1vp7a_ a.7.13.1 (A:) Exonucle 19.3 1.2E+02 0.0086 19.9 7.9 33 151-183 29-61 (68)
No 1
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.38 E-value=13 Score=23.50 Aligned_cols=27 Identities=30% Similarity=0.530 Sum_probs=21.6
Q ss_pred HHHHHHhcCc---chhhhhHHHHHHHHHhch
Q 026719 177 KSLTKILTSK---DVKATVCLTLLELVEQNK 204 (234)
Q Consensus 177 ~rl~kILtSk---d~kaa~c~kIlemae~nE 204 (234)
..|.++|.|+ |+.+| -+-|-+||+..|
T Consensus 9 klL~~LLkS~~PeDLqaA-NrLIK~mVkedq 38 (41)
T d1j2jb_ 9 KMLARLLKSSHPEDLRAA-NKLIKEMVQEDQ 38 (41)
T ss_dssp HHHHHHHTCSCHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHH-HHHHHHHHHHHH
Confidence 3578999997 78887 777889998765
No 2
>d1lkvx_ a.118.14.1 (X:) FliG {Thermotoga maritima [TaxId: 2336]}
Probab=31.17 E-value=74 Score=23.03 Aligned_cols=37 Identities=11% Similarity=0.349 Sum_probs=23.9
Q ss_pred CHHHHHHHHhcCchhhHHHHHHhhCCCCcHHHHHHHH
Q 026719 92 TAEEMIEYFLDTEAQELEFEIARLRPRLNQEFFSHLK 128 (234)
Q Consensus 92 ~h~~LIE~fl~Tea~Eie~eIAR~Rp~lT~eFF~hL~ 128 (234)
||..|..|+.+=+.+.+-.++..+-|+---+++..|-
T Consensus 1 dp~~la~~l~~e~p~~~A~iL~~L~~d~aa~vL~~L~ 37 (213)
T d1lkvx_ 1 DPVQLVNFLQSEHPQTIAVVLSYLDPPVAAQILGALP 37 (213)
T ss_dssp CCTHHHHHHHTSCHHHHHHHHTTSCHHHHHHHHHHSC
T ss_pred CHHHHHHHHHccCHHHHHHHHHcCCHHHHHHHHHhCC
Confidence 3556777776655556666667777766666666663
No 3
>d2crua1 a.5.6.1 (A:8-112) Programmed cell death protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.30 E-value=93 Score=22.26 Aligned_cols=42 Identities=17% Similarity=0.358 Sum_probs=34.5
Q ss_pred HHHHHHHHHh-cCcchhhhhHHHHHHHHHhchh-----hHHHHHHHHH
Q 026719 174 TARKSLTKIL-TSKDVKATVCLTLLELVEQNKI-----NRSLLTLLDE 215 (234)
Q Consensus 174 ~Ak~rl~kIL-tSkd~kaa~c~kIlemae~nEL-----D~sLm~LL~~ 215 (234)
.|++||..|= .-|++-..|-+-|+.||..|.| |..|..||..
T Consensus 43 eAreRL~rI~lvkPe~A~~VE~~liqlaq~G~i~~kisd~~Lk~iL~~ 90 (105)
T d2crua1 43 SARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKK 90 (105)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHhhcccCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHH
Confidence 8999999884 4567666677779999999998 7788888876
No 4
>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]}
Probab=27.12 E-value=80 Score=24.41 Aligned_cols=43 Identities=12% Similarity=0.048 Sum_probs=25.7
Q ss_pred CHHHHHHHHhcCchhhHHHHHHhhCCCCcHHHHHHHHHHhhhhh
Q 026719 92 TAEEMIEYFLDTEAQELEFEIARLRPRLNQEFFSHLKFELGQLR 135 (234)
Q Consensus 92 ~h~~LIE~fl~Tea~Eie~eIAR~Rp~lT~eFF~hL~~~i~~~r 135 (234)
|.+.+.+++..+-. .|..+..=+=..-+..||+||....+.+-
T Consensus 55 ~~~~~~~ll~pl~~-~i~~i~~~re~nR~s~~fNHLsavsEgi~ 97 (176)
T d1s0pa_ 55 SQETLLELIKPLNN-FAAEVGKIRDSNRSSKFFNNLSAISESIG 97 (176)
T ss_dssp CHHHHHHHTHHHHH-HHHHHHHHHHTCTTCTTHHHHHHHHTSGG
T ss_pred CcHHHHHHHHHHHH-HHHHHHHHHHhcCCCchhHHHHHHHHhch
Confidence 35667766653332 34443333334446679999999887764
No 5
>d1rw6a_ a.47.4.1 (A:) CAPPD, an extracellular domain of amyloid beta A4 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.42 E-value=1.5e+02 Score=23.28 Aligned_cols=73 Identities=22% Similarity=0.283 Sum_probs=52.4
Q ss_pred hhhcCCCC-CCHHHHHHHHhcCchhhHHHHHHhhCCCCcHHHHHHHHHHh--------hhhhhhhccCCchHHHHHHHHH
Q 026719 83 LRQSRVLP-DTAEEMIEYFLDTEAQELEFEIARLRPRLNQEFFSHLKFEL--------GQLRFAVSKTQDMEDRLIELEA 153 (234)
Q Consensus 83 ~r~aR~~P-~~h~~LIE~fl~Tea~Eie~eIAR~Rp~lT~eFF~hL~~~i--------~~~rfa~~~~~~~edrl~ELea 153 (234)
...+..+| .|+..+++.|..|=. -+|-|.+..|..|-...-+++...| +.|..|+...+-+..+. |.+
T Consensus 44 E~~~~~l~k~d~K~~~~rFq~~v~-~LE~e~~~erq~L~~~H~~rV~a~ln~rrr~a~~~y~~al~~~ppn~~~V--l~a 120 (192)
T d1rw6a_ 44 ERQAKNLPKADKKAVIQHFQEKVE-SLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHV--FNM 120 (192)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHH--HHH
T ss_pred HHHHhcccccChHHHHHHHHHHHH-HHhhhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHH--HHH
Confidence 34555666 567899999999988 9999999999999888887776654 44555666665555543 555
Q ss_pred HHHHH
Q 026719 154 LQKAL 158 (234)
Q Consensus 154 L~k~~ 158 (234)
|.+++
T Consensus 121 Lk~yi 125 (192)
T d1rw6a_ 121 LKKYV 125 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 6
>d1eija_ a.5.6.1 (A:) Hypothetical protein MTH1615 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.00 E-value=68 Score=21.77 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcC-cchhhhhHHHHHHHHHhchh-----hHHHHHHHHH
Q 026719 174 TARKSLTKILTS-KDVKATVCLTLLELVEQNKI-----NRSLLTLLDE 215 (234)
Q Consensus 174 ~Ak~rl~kILtS-kd~kaa~c~kIlemae~nEL-----D~sLm~LL~~ 215 (234)
.|++||..|--. |++-..|-+-|+.||..|.| |..|..||++
T Consensus 20 eAreRL~~i~lvkPekA~~vE~~liqlaq~G~i~~kisd~~L~~iL~~ 67 (72)
T d1eija_ 20 EARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKR 67 (72)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHCCSSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHH
Confidence 799999999655 56666667779999999998 6777777764
No 7
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.26 E-value=83 Score=21.65 Aligned_cols=38 Identities=21% Similarity=0.390 Sum_probs=21.4
Q ss_pred CCCcHHHHHHHHHHhhhhhhhhccCCchHHHHHHHHHHHHHHHHH
Q 026719 117 PRLNQEFFSHLKFELGQLRFAVSKTQDMEDRLIELEALQKALLEG 161 (234)
Q Consensus 117 p~lT~eFF~hL~~~i~~~rfa~~~~~~~edrl~ELeaL~k~~~ea 161 (234)
-.|=++||+.....-..+. ...+-+.+|..+.+.++.+
T Consensus 2 d~~m~~Ff~eV~~Ir~~I~-------~i~~~v~~i~~~~~~~l~~ 39 (124)
T d1ez3a_ 2 DRFMDEFFEQVEEIRGFID-------KIAENVEEVKRKHSAILAS 39 (124)
T ss_dssp CHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHcC
Confidence 3456789987665544443 2334455566666555543
No 8
>d1sqwa1 b.122.1.1 (A:95-170) Nip7p homolog, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.61 E-value=14 Score=26.03 Aligned_cols=16 Identities=38% Similarity=0.750 Sum_probs=11.1
Q ss_pred Ccccccccccccchhh
Q 026719 1 MAALSLGLGIASTAIT 16 (234)
Q Consensus 1 ~~~~~l~~g~~~~~~~ 16 (234)
|.-++||||+++.+-+
T Consensus 42 m~D~PLGFGvaakst~ 57 (76)
T d1sqwa1 42 MADIPLGFGVAAKSTQ 57 (76)
T ss_dssp TTCCEEEEEEESSCHH
T ss_pred CCCCccceeeeccCHH
Confidence 4567999999654433
No 9
>d1zs3a1 a.25.1.1 (A:3-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsB [TaxId: 1358]}
Probab=19.60 E-value=1.7e+02 Score=21.90 Aligned_cols=94 Identities=15% Similarity=0.098 Sum_probs=58.8
Q ss_pred HHHHHhhhhhhhhccCCchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-------HHHHH---HHHhcC------cchh
Q 026719 126 HLKFELGQLRFAVSKTQDMEDRLIELEALQKALLEGTEAYDNMQADLIT-------ARKSL---TKILTS------KDVK 189 (234)
Q Consensus 126 hL~~~i~~~rfa~~~~~~~edrl~ELeaL~k~~~eavEayDka~~~l~~-------Ak~rl---~kILtS------kd~k 189 (234)
-|+.-+.++|+=|. |+ + +- +-+++......+.+|...+-+.. --..+ ..|... .|.+
T Consensus 38 vl~~K~~~~HWnv~-G~---~-lH--~~fee~y~~~~~~~D~iAEri~~lG~~p~~t~~e~~e~s~i~e~~~~~~~~s~~ 110 (171)
T d1zs3a1 38 IENIRLTQAGIYAK-SP---V-KC--EYLREIAQREVEYFFKISDLLLDENEIVPSTTEEFLKYHKFITEDPKAKYWTDE 110 (171)
T ss_dssp HHHHHHHHHHHHCS-SH---H-HH--HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCGGGGGSCHH
T ss_pred HHHHHHHcCceeeE-Ch---H-HH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCCccHHHHHHHccCccCCCCCCCCCHH
Confidence 34555667776664 43 2 21 12444445556677777776641 12222 334432 1455
Q ss_pred hhhHHHHHHHHHhchhhHHHHHHHHHHHHHhhhccHHHHHhhhh
Q 026719 190 ATVCLTLLELVEQNKINRSLLTLLDENIANAQKSDQKQVAAFME 233 (234)
Q Consensus 190 aa~c~kIlemae~nELD~sLm~LL~~NiasAkes~q~~aa~FMe 233 (234)
.+ +-++++.. .++...+.+.|..|.+.|...-+.||.
T Consensus 111 em----l~~Lv~d~---~~~~~~~~~~i~~A~~e~D~~tadll~ 147 (171)
T d1zs3a1 111 DL----LESFIVDF---QAQNMFITRAIKLANKEEKFALAAGVV 147 (171)
T ss_dssp HH----HHHHHHHH---HHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HH----HHHHHHHH---HHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 56 77777765 578999999999999999999999884
No 10
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=19.29 E-value=1.2e+02 Score=19.91 Aligned_cols=33 Identities=24% Similarity=0.182 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 026719 151 LEALQKALLEGTEAYDNMQADLITARKSLTKIL 183 (234)
Q Consensus 151 LeaL~k~~~eavEayDka~~~l~~Ak~rl~kIL 183 (234)
|+..-+.-..|+......+..+..|+.++..|.
T Consensus 29 Leesl~~ye~G~~L~~~C~~~L~~ae~ki~~l~ 61 (68)
T d1vp7a_ 29 LEQSLSAYRRGVELARVCQDRLAQAEQQVKVLE 61 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445556788888888888888988886654
Done!