Query 026720
Match_columns 234
No_of_seqs 183 out of 2217
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 11:47:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026720.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026720hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0661 MAPK related serine/th 100.0 1.4E-28 3.1E-33 197.4 9.8 176 50-234 86-263 (538)
2 PLN03081 pentatricopeptide (PP 99.9 2.5E-27 5.3E-32 209.8 2.8 203 1-231 215-433 (697)
3 PLN03077 Protein ECB2; Provisi 99.9 1.2E-26 2.6E-31 209.7 5.3 183 1-211 279-464 (857)
4 PLN03077 Protein ECB2; Provisi 99.9 9.2E-27 2E-31 210.5 3.7 183 1-211 178-363 (857)
5 PLN03081 pentatricopeptide (PP 99.9 6.5E-27 1.4E-31 207.1 2.3 155 1-167 316-474 (697)
6 KOG0659 Cdk activating kinase 99.9 1.6E-24 3.5E-29 162.8 10.4 169 51-233 66-252 (318)
7 KOG0658 Glycogen synthase kina 99.9 5.1E-24 1.1E-28 166.6 9.3 174 46-230 94-273 (364)
8 KOG0663 Protein kinase PITSLRE 99.9 4.1E-23 8.9E-28 159.9 10.4 168 50-231 153-328 (419)
9 PLN03218 maturation of RBCL 1; 99.9 1.9E-24 4E-29 195.5 0.9 135 1-136 498-641 (1060)
10 KOG0591 NIMA (never in mitosis 99.9 1.2E-22 2.7E-27 154.0 9.0 168 50-227 96-275 (375)
11 PLN03218 maturation of RBCL 1; 99.9 8.3E-24 1.8E-28 191.3 0.8 138 1-139 640-784 (1060)
12 KOG0593 Predicted protein kina 99.9 3.9E-23 8.4E-28 158.2 3.7 143 51-202 78-223 (396)
13 KOG0660 Mitogen-activated prot 99.9 1.5E-22 3.3E-27 158.1 6.8 143 83-234 135-282 (359)
14 KOG0581 Mitogen-activated prot 99.9 8.3E-22 1.8E-26 154.5 6.9 174 49-233 153-335 (364)
15 KOG0594 Protein kinase PCTAIRE 99.9 3.6E-21 7.7E-26 150.4 10.0 149 74-232 120-272 (323)
16 KOG0600 Cdc2-related protein k 99.8 1.7E-21 3.6E-26 158.1 5.9 148 50-206 194-345 (560)
17 KOG0192 Tyrosine kinase specif 99.8 6.1E-21 1.3E-25 154.9 7.1 178 49-232 115-298 (362)
18 KOG4721 Serine/threonine prote 99.8 1.8E-21 3.8E-26 160.3 -0.3 174 50-233 188-364 (904)
19 KOG0595 Serine/threonine-prote 99.8 4.1E-20 8.9E-25 146.6 5.8 137 48-194 83-227 (429)
20 KOG0197 Tyrosine kinases [Sign 99.8 4.9E-20 1.1E-24 150.6 5.5 173 50-232 277-456 (468)
21 KOG0665 Jun-N-terminal kinase 99.8 2.7E-19 5.8E-24 138.0 7.7 137 96-233 132-269 (369)
22 KOG0662 Cyclin-dependent kinas 99.8 2.2E-19 4.7E-24 128.5 5.2 169 50-233 77-254 (292)
23 KOG0615 Serine/threonine prote 99.8 2.2E-20 4.8E-25 148.3 0.1 177 48-233 250-437 (475)
24 KOG0589 Serine/threonine prote 99.8 2.5E-19 5.4E-24 145.8 5.4 174 49-232 79-257 (426)
25 KOG0598 Ribosomal protein S6 k 99.8 6.1E-19 1.3E-23 138.4 7.4 156 50-215 101-259 (357)
26 KOG0575 Polo-like serine/threo 99.8 3.4E-19 7.4E-24 147.7 6.0 175 47-233 91-269 (592)
27 KOG0592 3-phosphoinositide-dep 99.8 7.9E-19 1.7E-23 143.8 7.9 170 50-230 150-335 (604)
28 KOG0198 MEKK and related serin 99.8 1.7E-19 3.7E-24 142.7 3.8 177 48-233 90-276 (313)
29 KOG0578 p21-activated serine/t 99.8 1.2E-18 2.6E-23 143.3 7.6 171 51-233 347-523 (550)
30 KOG0588 Serine/threonine prote 99.7 1.9E-18 4.2E-23 144.6 6.6 174 50-233 88-263 (786)
31 KOG0616 cAMP-dependent protein 99.7 4.7E-18 1E-22 130.0 7.7 153 48-212 118-272 (355)
32 KOG0667 Dual-specificity tyros 99.7 2.2E-18 4.9E-23 144.0 6.3 116 75-202 290-409 (586)
33 KOG0577 Serine/threonine prote 99.7 5.2E-18 1.1E-22 140.6 7.6 172 49-233 101-278 (948)
34 KOG0583 Serine/threonine prote 99.7 9.6E-18 2.1E-22 137.3 8.0 175 48-232 94-274 (370)
35 KOG0201 Serine/threonine prote 99.7 4.5E-18 9.7E-23 136.2 5.2 174 50-233 87-263 (467)
36 KOG0033 Ca2+/calmodulin-depend 99.7 1.1E-17 2.4E-22 125.1 6.8 149 75-233 111-267 (355)
37 PHA02988 hypothetical protein; 99.7 1.5E-17 3.2E-22 132.5 7.9 174 48-232 96-274 (283)
38 PTZ00036 glycogen synthase kin 99.7 1.1E-16 2.3E-21 135.0 10.8 142 83-233 180-351 (440)
39 PTZ00283 serine/threonine prot 99.7 5.8E-17 1.3E-21 138.4 8.2 173 50-232 115-296 (496)
40 KOG0196 Tyrosine kinase, EPH ( 99.7 4.2E-18 9.2E-23 144.8 1.1 172 50-232 706-886 (996)
41 cd07871 STKc_PCTAIRE3 Catalyti 99.7 5.3E-17 1.1E-21 129.6 6.6 174 50-233 79-285 (288)
42 cd05628 STKc_NDR1 Catalytic do 99.7 8.2E-17 1.8E-21 132.6 7.4 175 49-233 76-293 (363)
43 cd07869 STKc_PFTAIRE1 Catalyti 99.7 7.7E-17 1.7E-21 129.5 6.8 176 49-233 78-288 (303)
44 cd07862 STKc_CDK6 Catalytic do 99.7 2.4E-16 5.3E-21 125.7 9.7 136 97-233 125-287 (290)
45 KOG0666 Cyclin C-dependent kin 99.7 1.3E-16 2.9E-21 123.1 7.6 122 77-207 135-275 (438)
46 PTZ00267 NIMA-related protein 99.7 1.5E-16 3.2E-21 135.5 8.7 174 49-232 140-322 (478)
47 cd07848 STKc_CDKL5 Catalytic d 99.7 7.8E-17 1.7E-21 128.3 6.3 174 50-233 76-284 (287)
48 cd05600 STKc_Sid2p_Dbf2p Catal 99.7 6.8E-17 1.5E-21 131.5 6.1 173 49-233 76-257 (333)
49 cd07859 STKc_TDY_MAPK_plant Ca 99.7 1.4E-16 3E-21 129.8 7.8 174 50-233 80-290 (338)
50 cd05631 STKc_GRK4 Catalytic do 99.7 1.1E-16 2.4E-21 127.6 7.0 174 49-232 75-260 (285)
51 KOG0597 Serine-threonine prote 99.7 8.5E-17 1.8E-21 132.8 5.8 171 51-233 78-251 (808)
52 cd05612 STKc_PRKX_like Catalyt 99.7 1.6E-16 3.4E-21 127.0 7.1 170 50-232 77-253 (291)
53 cd05573 STKc_ROCK_NDR_like Cat 99.7 7.9E-17 1.7E-21 131.9 5.3 173 50-233 77-285 (350)
54 KOG0696 Serine/threonine prote 99.7 4.9E-16 1.1E-20 124.3 9.1 137 50-196 426-565 (683)
55 cd07874 STKc_JNK3 Catalytic do 99.7 3.7E-16 8E-21 128.3 8.5 171 50-233 98-311 (355)
56 cd05116 PTKc_Syk Catalytic dom 99.6 2.8E-16 6.1E-21 123.2 7.2 173 50-232 71-250 (257)
57 cd05102 PTKc_VEGFR3 Catalytic 99.6 4.6E-16 9.9E-21 126.9 8.6 135 97-232 189-329 (338)
58 KOG0694 Serine/threonine prote 99.6 5.9E-16 1.3E-20 130.3 8.9 160 50-220 445-607 (694)
59 cd05616 STKc_cPKC_beta Catalyt 99.6 3E-16 6.5E-21 127.3 6.9 167 50-227 77-246 (323)
60 cd05571 STKc_PKB Catalytic dom 99.6 1.5E-16 3.2E-21 129.1 4.9 173 49-232 70-250 (323)
61 cd05586 STKc_Sck1_like Catalyt 99.6 5.6E-17 1.2E-21 131.9 2.4 175 49-232 71-252 (330)
62 cd05590 STKc_nPKC_eta Catalyti 99.6 3E-16 6.5E-21 127.1 6.6 167 50-227 72-241 (320)
63 PTZ00263 protein kinase A cata 99.6 2.2E-16 4.7E-21 128.4 5.7 171 49-232 93-270 (329)
64 KOG0599 Phosphorylase kinase g 99.6 4.1E-16 8.9E-21 118.5 6.7 178 46-232 95-282 (411)
65 KOG0614 cGMP-dependent protein 99.6 1.9E-15 4.1E-20 123.5 10.6 123 97-221 535-661 (732)
66 PTZ00266 NIMA-related protein 99.6 5.5E-16 1.2E-20 138.6 8.2 174 50-232 90-294 (1021)
67 cd05614 STKc_MSK2_N N-terminal 99.6 3E-16 6.6E-21 127.7 6.0 174 50-232 81-266 (332)
68 cd05587 STKc_cPKC Catalytic do 99.6 4.8E-16 1E-20 126.1 7.1 167 50-227 77-246 (324)
69 cd05620 STKc_nPKC_delta Cataly 99.6 5E-16 1.1E-20 125.6 7.1 172 49-231 71-246 (316)
70 cd07872 STKc_PCTAIRE2 Catalyti 99.6 4E-16 8.8E-21 125.7 6.4 137 97-233 119-286 (309)
71 cd05592 STKc_nPKC_theta_delta 99.6 5.5E-16 1.2E-20 125.3 7.1 168 50-228 72-242 (316)
72 cd05064 PTKc_EphR_A10 Catalyti 99.6 4.1E-16 9E-21 122.9 6.1 175 48-232 80-260 (266)
73 cd05585 STKc_YPK1_like Catalyt 99.6 5.7E-16 1.2E-20 125.0 6.8 168 49-227 68-238 (312)
74 PTZ00426 cAMP-dependent protei 99.6 2.9E-16 6.3E-21 128.2 5.1 171 49-232 106-283 (340)
75 cd05570 STKc_PKC Catalytic dom 99.6 5.8E-16 1.2E-20 125.3 6.8 168 49-227 71-241 (318)
76 KOG2345 Serine/threonine prote 99.6 1.1E-16 2.5E-21 119.7 2.4 184 48-233 97-296 (302)
77 cd05595 STKc_PKB_beta Catalyti 99.6 4.4E-16 9.6E-21 126.3 6.1 172 50-232 71-250 (323)
78 cd05591 STKc_nPKC_epsilon Cata 99.6 3.9E-16 8.6E-21 126.4 5.8 166 49-225 71-239 (321)
79 cd07853 STKc_NLK Catalytic dom 99.6 4.7E-16 1E-20 128.5 6.4 137 97-233 118-288 (372)
80 cd05629 STKc_NDR_like_fungal C 99.6 2.5E-16 5.4E-21 130.4 4.7 175 48-232 75-304 (377)
81 cd05617 STKc_aPKC_zeta Catalyt 99.6 5.2E-16 1.1E-20 126.1 6.3 168 50-227 72-248 (327)
82 cd05588 STKc_aPKC Catalytic do 99.6 5.3E-16 1.1E-20 126.1 6.3 168 49-226 71-249 (329)
83 cd05626 STKc_LATS2 Catalytic d 99.6 5.9E-16 1.3E-20 128.3 6.7 175 49-233 76-305 (381)
84 cd07831 STKc_MOK Catalytic dom 99.6 1.1E-15 2.3E-20 121.4 7.6 137 97-233 115-279 (282)
85 KOG4645 MAPKKK (MAP kinase kin 99.6 1.9E-16 4.2E-21 141.1 3.6 176 49-233 1309-1494(1509)
86 KOG1095 Protein tyrosine kinas 99.6 1.2E-15 2.5E-20 135.6 8.5 180 50-232 771-956 (1025)
87 cd05593 STKc_PKB_gamma Catalyt 99.6 4.7E-16 1E-20 126.4 5.5 173 49-232 70-250 (328)
88 cd05599 STKc_NDR_like Catalyti 99.6 4.6E-16 9.9E-21 128.2 5.4 173 49-232 76-295 (364)
89 cd07868 STKc_CDK8 Catalytic do 99.6 1.9E-15 4.2E-20 122.1 8.9 137 97-233 123-314 (317)
90 cd07830 STKc_MAK_like Catalyti 99.6 2.5E-15 5.4E-20 119.3 9.3 137 97-233 114-280 (283)
91 cd07863 STKc_CDK4 Catalytic do 99.6 2.8E-15 6E-20 119.4 9.6 136 97-233 123-285 (288)
92 cd05596 STKc_ROCK Catalytic do 99.6 9.8E-16 2.1E-20 126.5 7.1 175 49-233 118-304 (370)
93 PF07714 Pkinase_Tyr: Protein 99.6 2E-16 4.4E-21 124.3 2.7 173 50-232 77-257 (259)
94 cd05619 STKc_nPKC_theta Cataly 99.6 1.1E-15 2.4E-20 123.6 7.1 171 49-230 71-245 (316)
95 cd08220 STKc_Nek8 Catalytic do 99.6 2.3E-15 5E-20 117.7 8.7 174 50-233 75-253 (256)
96 cd05048 PTKc_Ror Catalytic Dom 99.6 8.7E-16 1.9E-20 122.0 6.3 135 97-232 139-278 (283)
97 cd07847 STKc_CDKL1_4 Catalytic 99.6 1.9E-15 4.1E-20 120.1 8.2 175 50-233 76-283 (286)
98 cd05601 STKc_CRIK Catalytic do 99.6 2.4E-16 5.1E-21 128.2 2.9 175 49-233 76-263 (330)
99 cd05607 STKc_GRK7 Catalytic do 99.6 1.5E-15 3.3E-20 120.5 7.4 175 48-232 67-249 (277)
100 cd05605 STKc_GRK4_like Catalyt 99.6 1.5E-15 3.3E-20 120.9 7.3 174 49-232 75-260 (285)
101 cd05625 STKc_LATS1 Catalytic d 99.6 7.2E-16 1.6E-20 127.8 5.5 172 49-232 76-304 (382)
102 KOG0584 Serine/threonine prote 99.6 8.9E-16 1.9E-20 128.0 5.7 171 50-233 119-296 (632)
103 cd05584 STKc_p70S6K Catalytic 99.6 1.3E-15 2.7E-20 123.6 6.5 172 50-232 76-255 (323)
104 cd05618 STKc_aPKC_iota Catalyt 99.6 1.1E-15 2.3E-20 124.3 6.1 169 49-227 71-250 (329)
105 cd05089 PTKc_Tie1 Catalytic do 99.6 2.2E-15 4.8E-20 120.7 7.8 135 97-232 134-270 (297)
106 cd07876 STKc_JNK2 Catalytic do 99.6 4.5E-15 9.7E-20 122.1 9.8 134 97-231 138-272 (359)
107 cd05622 STKc_ROCK1 Catalytic d 99.6 1.4E-15 3E-20 125.6 6.7 175 49-233 118-304 (371)
108 cd07878 STKc_p38beta_MAPK11 Ca 99.6 5.8E-15 1.2E-19 120.7 10.3 148 75-233 119-298 (343)
109 cd07875 STKc_JNK1 Catalytic do 99.6 4.2E-15 9.1E-20 122.5 9.5 133 97-230 141-274 (364)
110 cd05621 STKc_ROCK2 Catalytic d 99.6 1.2E-15 2.6E-20 126.0 6.2 175 49-233 118-304 (370)
111 KOG0032 Ca2+/calmodulin-depend 99.6 1.7E-15 3.7E-20 124.3 7.0 175 48-233 110-293 (382)
112 cd05106 PTKc_CSF-1R Catalytic 99.6 4.9E-15 1.1E-19 122.5 9.8 135 97-232 227-367 (374)
113 cd05602 STKc_SGK1 Catalytic do 99.6 1.1E-15 2.4E-20 124.0 5.9 168 50-228 72-242 (325)
114 cd06649 PKc_MEK2 Catalytic dom 99.6 3.4E-15 7.3E-20 121.5 8.6 172 50-233 79-301 (331)
115 KOG0194 Protein tyrosine kinas 99.6 4.1E-16 9E-21 129.2 3.3 174 50-231 237-414 (474)
116 cd07841 STKc_CDK7 Catalytic do 99.6 2.1E-15 4.5E-20 120.8 7.3 175 49-233 77-282 (298)
117 PTZ00284 protein kinase; Provi 99.6 3.6E-15 7.7E-20 126.8 9.1 134 97-233 246-438 (467)
118 cd05049 PTKc_Trk Catalytic dom 99.6 2.7E-15 5.9E-20 119.0 7.8 174 49-232 83-276 (280)
119 KOG0582 Ste20-like serine/thre 99.6 3E-15 6.4E-20 120.5 7.9 175 50-233 100-293 (516)
120 PHA02882 putative serine/threo 99.6 5E-15 1.1E-19 118.5 9.4 135 97-232 141-291 (294)
121 cd06628 STKc_MAPKKK_Byr2_like 99.6 3.1E-15 6.8E-20 117.8 8.0 176 48-233 80-264 (267)
122 cd07839 STKc_CDK5 Catalytic do 99.6 1.8E-15 3.8E-20 120.3 6.6 137 97-233 114-281 (284)
123 cd07861 STKc_CDK1_euk Catalyti 99.6 2.5E-15 5.3E-20 119.5 7.4 174 50-233 75-282 (285)
124 cd00192 PTKc Catalytic domain 99.6 2.6E-15 5.7E-20 117.5 7.3 175 49-233 71-260 (262)
125 cd08529 STKc_FA2-like Catalyti 99.6 4.2E-15 9.1E-20 116.2 8.4 174 50-233 75-253 (256)
126 cd05111 PTK_HER3 Pseudokinase 99.6 3.8E-15 8.2E-20 118.3 8.2 172 50-232 84-263 (279)
127 cd05093 PTKc_TrkB Catalytic do 99.6 2.7E-15 5.8E-20 119.7 7.4 173 49-231 82-273 (288)
128 cd05114 PTKc_Tec_Rlk Catalytic 99.6 3.3E-15 7E-20 117.1 7.7 174 49-232 74-253 (256)
129 cd05075 PTKc_Axl Catalytic dom 99.6 4.5E-15 9.8E-20 117.2 8.4 172 50-232 82-266 (272)
130 cd05575 STKc_SGK Catalytic dom 99.6 1.3E-15 2.9E-20 123.5 5.5 167 50-227 72-241 (323)
131 KOG0986 G protein-coupled rece 99.6 2.3E-15 5E-20 121.5 6.7 103 73-185 286-390 (591)
132 cd05615 STKc_cPKC_alpha Cataly 99.6 3.8E-15 8.3E-20 120.8 8.1 166 50-226 77-245 (323)
133 cd05108 PTKc_EGFR Catalytic do 99.6 4.3E-15 9.4E-20 120.1 8.2 172 50-232 84-263 (316)
134 cd05603 STKc_SGK2 Catalytic do 99.6 1.9E-15 4.1E-20 122.5 6.0 167 50-227 72-241 (321)
135 cd05060 PTKc_Syk_like Catalyti 99.6 3.7E-15 7.9E-20 116.9 7.4 173 50-232 71-250 (257)
136 cd05589 STKc_PKN Catalytic dom 99.6 2.8E-15 6.1E-20 121.6 6.9 166 49-226 77-245 (324)
137 cd07843 STKc_CDC2L1 Catalytic 99.6 5.5E-15 1.2E-19 118.1 8.4 176 48-233 80-290 (293)
138 cd05594 STKc_PKB_alpha Catalyt 99.6 5.4E-16 1.2E-20 125.9 2.6 173 49-232 70-251 (325)
139 cd06609 STKc_MST3_like Catalyt 99.6 3.8E-15 8.3E-20 117.8 7.4 174 49-233 74-251 (274)
140 cd05630 STKc_GRK6 Catalytic do 99.6 3.9E-15 8.5E-20 118.6 7.4 174 49-232 75-260 (285)
141 cd05118 STKc_CMGC Catalytic do 99.6 4.1E-15 8.8E-20 118.0 7.4 137 97-233 113-280 (283)
142 cd05598 STKc_LATS Catalytic do 99.6 8E-16 1.7E-20 127.3 3.4 174 49-233 76-301 (376)
143 cd05582 STKc_RSK_N N-terminal 99.6 5.3E-16 1.2E-20 125.5 2.2 167 50-227 74-243 (318)
144 cd05035 PTKc_Axl_like Catalyti 99.6 6.3E-15 1.4E-19 116.3 8.3 174 49-232 82-267 (273)
145 cd05113 PTKc_Btk_Bmx Catalytic 99.6 3.6E-15 7.8E-20 116.9 6.8 175 49-233 74-254 (256)
146 cd05052 PTKc_Abl Catalytic dom 99.6 5.2E-15 1.1E-19 116.4 7.7 173 50-232 78-257 (263)
147 cd07873 STKc_PCTAIRE1 Catalyti 99.6 3.9E-15 8.4E-20 119.5 7.1 137 97-233 119-286 (301)
148 cd05072 PTKc_Lyn Catalytic dom 99.6 4.2E-15 9.2E-20 116.7 7.0 174 49-232 76-256 (261)
149 cd08223 STKc_Nek4 Catalytic do 99.6 1.2E-14 2.7E-19 113.7 9.5 174 50-233 76-254 (257)
150 cd06646 STKc_MAP4K5 Catalytic 99.6 2.4E-15 5.2E-20 118.5 5.5 175 50-233 82-265 (267)
151 cd06625 STKc_MEKK3_like Cataly 99.6 7.4E-15 1.6E-19 115.3 8.2 174 50-233 80-260 (263)
152 cd06643 STKc_SLK Catalytic dom 99.6 6.7E-15 1.5E-19 117.0 8.0 175 50-233 78-262 (282)
153 KOG0574 STE20-like serine/thre 99.6 1.8E-16 4E-21 122.0 -1.0 169 50-231 104-281 (502)
154 KOG0193 Serine/threonine prote 99.6 1.3E-15 2.8E-20 126.6 3.8 175 50-232 463-648 (678)
155 cd06645 STKc_MAP4K3 Catalytic 99.6 5.5E-15 1.2E-19 116.4 7.3 175 50-233 82-265 (267)
156 cd07845 STKc_CDK10 Catalytic d 99.6 5.1E-15 1.1E-19 119.2 7.2 174 50-233 84-290 (309)
157 cd05608 STKc_GRK1 Catalytic do 99.6 6.9E-15 1.5E-19 116.9 7.8 170 49-228 68-247 (280)
158 cd05632 STKc_GRK5 Catalytic do 99.6 7.5E-15 1.6E-19 117.0 8.0 169 49-227 75-250 (285)
159 cd05070 PTKc_Fyn_Yrk Catalytic 99.6 6.5E-15 1.4E-19 115.6 7.4 172 50-231 76-254 (260)
160 KOG0605 NDR and related serine 99.6 3.8E-15 8.3E-20 122.2 6.1 150 47-206 214-416 (550)
161 cd05627 STKc_NDR2 Catalytic do 99.6 1.4E-15 3E-20 125.2 3.4 137 49-195 76-250 (360)
162 PF13041 PPR_2: PPR repeat fam 99.6 4E-15 8.6E-20 86.6 4.4 50 8-57 1-50 (50)
163 cd05109 PTKc_HER2 Catalytic do 99.6 7.3E-15 1.6E-19 116.6 7.4 173 50-232 84-263 (279)
164 KOG1026 Nerve growth factor re 99.6 2.7E-15 5.8E-20 129.1 5.2 178 50-230 565-755 (774)
165 cd06613 STKc_MAP4K3_like Catal 99.6 6.8E-15 1.5E-19 115.4 7.1 175 50-233 76-260 (262)
166 cd07833 STKc_CDKL Catalytic do 99.6 7.5E-15 1.6E-19 116.8 7.4 137 97-233 115-285 (288)
167 cd05059 PTKc_Tec_like Catalyti 99.6 5.5E-15 1.2E-19 115.8 6.5 175 49-233 74-254 (256)
168 cd05115 PTKc_Zap-70 Catalytic 99.6 7.2E-15 1.6E-19 115.3 7.2 173 50-232 70-250 (257)
169 cd05068 PTKc_Frk_like Catalyti 99.6 1.5E-14 3.2E-19 113.7 8.9 173 50-232 77-256 (261)
170 cd07837 STKc_CdkB_plant Cataly 99.6 1.2E-14 2.6E-19 116.2 8.5 137 97-233 125-291 (295)
171 cd05094 PTKc_TrkC Catalytic do 99.6 8.6E-15 1.9E-19 116.9 7.6 174 49-232 82-277 (291)
172 cd05069 PTKc_Yes Catalytic dom 99.6 8.1E-15 1.8E-19 115.1 7.2 173 50-232 76-255 (260)
173 cd07846 STKc_CDKL2_3 Catalytic 99.6 9.6E-15 2.1E-19 116.2 7.7 175 50-233 76-283 (286)
174 cd05604 STKc_SGK3 Catalytic do 99.6 1.9E-15 4.1E-20 122.7 3.7 168 49-227 71-241 (325)
175 KOG0611 Predicted serine/threo 99.6 4.3E-15 9.4E-20 118.7 5.5 169 51-231 130-301 (668)
176 cd05077 PTK_Jak1_rpt1 Pseudoki 99.6 9.5E-15 2.1E-19 115.0 7.5 171 49-233 79-260 (262)
177 cd05033 PTKc_EphR Catalytic do 99.6 8.8E-15 1.9E-19 115.3 7.3 173 50-232 81-260 (266)
178 cd06637 STKc_TNIK Catalytic do 99.6 9.4E-15 2E-19 115.4 7.4 175 50-233 85-269 (272)
179 cd05104 PTKc_Kit Catalytic dom 99.6 2.1E-14 4.4E-19 118.9 9.7 135 97-232 229-369 (375)
180 KOG1989 ARK protein kinase fam 99.6 2.5E-15 5.5E-20 129.5 4.4 176 50-232 118-306 (738)
181 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.6 8.5E-15 1.8E-19 114.9 7.0 171 49-233 74-256 (258)
182 cd05606 STKc_beta_ARK Catalyti 99.6 1E-14 2.2E-19 115.9 7.4 174 49-232 72-254 (278)
183 cd08219 STKc_Nek3 Catalytic do 99.6 6.2E-15 1.3E-19 115.4 6.2 174 50-233 74-252 (255)
184 cd07867 STKc_CDC2L6 Catalytic 99.6 2.5E-14 5.4E-19 115.5 9.9 137 97-233 123-314 (317)
185 cd05082 PTKc_Csk Catalytic dom 99.6 7.5E-15 1.6E-19 115.0 6.6 171 50-232 76-251 (256)
186 cd05091 PTKc_Ror2 Catalytic do 99.6 1.8E-14 3.8E-19 114.6 8.8 135 97-232 139-278 (283)
187 cd05063 PTKc_EphR_A2 Catalytic 99.5 9.5E-15 2.1E-19 115.1 7.0 173 50-232 82-262 (268)
188 cd08217 STKc_Nek2 Catalytic do 99.5 2.2E-14 4.7E-19 112.5 9.0 174 50-233 77-262 (265)
189 cd05597 STKc_DMPK_like Catalyt 99.5 8.5E-15 1.9E-19 119.2 6.8 176 49-233 76-266 (331)
190 cd06636 STKc_MAP4K4_6 Catalyti 99.5 1E-14 2.2E-19 115.9 7.1 175 50-233 95-279 (282)
191 PLN00034 mitogen-activated pro 99.5 8.9E-15 1.9E-19 120.1 7.0 170 51-233 149-328 (353)
192 KOG0596 Dual specificity; seri 99.5 2.2E-14 4.7E-19 118.4 9.0 171 51-233 434-627 (677)
193 cd05092 PTKc_TrkA Catalytic do 99.5 1.1E-14 2.5E-19 115.6 7.3 135 97-232 137-276 (280)
194 PTZ00024 cyclin-dependent prot 99.5 1.7E-14 3.7E-19 117.5 8.4 175 49-233 95-313 (335)
195 cd05088 PTKc_Tie2 Catalytic do 99.5 7.2E-15 1.6E-19 118.1 6.1 174 49-232 83-275 (303)
196 cd06650 PKc_MEK1 Catalytic dom 99.5 1.8E-14 3.9E-19 117.3 8.4 173 49-233 78-299 (333)
197 cd06608 STKc_myosinIII_like Ca 99.5 1.3E-14 2.9E-19 114.5 7.3 175 50-233 85-272 (275)
198 cd07832 STKc_CCRK Catalytic do 99.5 1.5E-14 3.3E-19 114.9 7.7 174 50-233 75-282 (286)
199 cd05101 PTKc_FGFR2 Catalytic d 99.5 1.6E-14 3.6E-19 116.0 7.9 173 50-232 97-291 (304)
200 cd05047 PTKc_Tie Catalytic dom 99.5 9.9E-15 2.1E-19 115.3 6.4 174 49-232 71-263 (270)
201 cd05148 PTKc_Srm_Brk Catalytic 99.5 1.7E-14 3.6E-19 113.3 7.6 173 50-232 78-256 (261)
202 cd05623 STKc_MRCK_alpha Cataly 99.5 7.1E-15 1.5E-19 119.7 5.7 138 49-195 76-222 (332)
203 cd07829 STKc_CDK_like Catalyti 99.5 2.8E-14 6.2E-19 113.1 8.9 174 50-233 74-279 (282)
204 cd06638 STKc_myosinIIIA Cataly 99.5 1.5E-14 3.3E-19 115.1 7.4 176 49-233 95-283 (286)
205 PHA03207 serine/threonine kina 99.5 2.6E-14 5.6E-19 119.0 9.0 149 75-233 186-375 (392)
206 KOG0983 Mitogen-activated prot 99.5 3.7E-14 8.1E-19 108.0 9.0 134 100-233 210-349 (391)
207 cd05062 PTKc_IGF-1R Catalytic 99.5 1.7E-14 3.7E-19 114.3 7.6 182 49-233 84-274 (277)
208 cd05083 PTKc_Chk Catalytic dom 99.5 1.6E-14 3.4E-19 113.1 7.2 171 50-232 74-249 (254)
209 cd06631 STKc_YSK4 Catalytic do 99.5 2.3E-14 5.1E-19 112.7 8.2 176 48-233 76-262 (265)
210 cd08221 STKc_Nek9 Catalytic do 99.5 2.3E-14 5.1E-19 112.1 8.2 174 50-233 75-253 (256)
211 cd05058 PTKc_Met_Ron Catalytic 99.5 1.7E-14 3.7E-19 113.2 7.3 174 49-232 72-254 (262)
212 cd05032 PTKc_InsR_like Catalyt 99.5 1.8E-14 3.9E-19 114.1 7.4 175 49-233 84-274 (277)
213 cd05036 PTKc_ALK_LTK Catalytic 99.5 1.3E-14 2.8E-19 115.1 6.6 181 50-233 85-274 (277)
214 KOG0668 Casein kinase II, alph 99.5 7E-14 1.5E-18 104.0 9.9 139 49-199 110-252 (338)
215 cd05633 STKc_GRK3 Catalytic do 99.5 1.6E-14 3.5E-19 114.8 7.1 174 49-232 72-254 (279)
216 cd06644 STKc_STK10_LOK Catalyt 99.5 3E-14 6.5E-19 113.8 8.6 176 49-233 84-269 (292)
217 cd06605 PKc_MAPKK Catalytic do 99.5 7.8E-15 1.7E-19 115.4 5.0 173 50-233 75-257 (265)
218 cd05071 PTKc_Src Catalytic dom 99.5 2.5E-14 5.5E-19 112.5 7.9 173 50-232 76-255 (262)
219 cd05110 PTKc_HER4 Catalytic do 99.5 4E-14 8.6E-19 113.8 9.1 172 50-232 84-263 (303)
220 KOG0664 Nemo-like MAPK-related 99.5 9.5E-15 2.1E-19 111.3 5.1 121 76-205 158-282 (449)
221 cd06651 STKc_MEKK3 Catalytic d 99.5 2E-14 4.3E-19 113.3 7.0 173 50-233 82-261 (266)
222 cd05054 PTKc_VEGFR Catalytic d 99.5 1.9E-14 4.2E-19 117.4 7.2 135 97-232 188-328 (337)
223 cd07840 STKc_CDK9_like Catalyt 99.5 2.7E-14 5.8E-19 113.5 7.8 137 97-233 115-284 (287)
224 cd06648 STKc_PAK_II Catalytic 99.5 3.4E-14 7.5E-19 113.2 8.4 173 50-233 92-269 (285)
225 cd05099 PTKc_FGFR4 Catalytic d 99.5 2.7E-14 5.8E-19 115.3 7.9 173 50-232 94-288 (314)
226 cd07838 STKc_CDK4_6_like Catal 99.5 4.8E-14 1E-18 112.1 9.2 136 97-233 122-284 (287)
227 cd06611 STKc_SLK_like Catalyti 99.5 3.3E-14 7.1E-19 112.9 8.2 176 49-233 77-262 (280)
228 KOG0669 Cyclin T-dependent kin 99.5 6.7E-14 1.5E-18 105.5 9.3 112 97-208 139-256 (376)
229 cd06639 STKc_myosinIIIB Cataly 99.5 2.7E-14 5.7E-19 114.0 7.7 176 49-233 99-287 (291)
230 cd05067 PTKc_Lck_Blk Catalytic 99.5 1.9E-14 4.1E-19 113.0 6.8 173 50-232 76-255 (260)
231 cd06658 STKc_PAK5 Catalytic do 99.5 2.1E-14 4.6E-19 114.8 7.0 173 50-233 95-272 (292)
232 cd06632 STKc_MEKK1_plant Catal 99.5 3.1E-14 6.7E-19 111.4 7.8 175 50-233 78-255 (258)
233 cd07834 STKc_MAPK Catalytic do 99.5 1.9E-14 4E-19 117.0 6.7 137 97-233 118-289 (330)
234 cd07864 STKc_CDK12 Catalytic d 99.5 2.3E-14 4.9E-19 114.9 7.1 150 75-233 117-299 (302)
235 cd07855 STKc_ERK5 Catalytic do 99.5 1.7E-14 3.7E-19 117.5 6.4 173 50-232 84-293 (334)
236 cd05042 PTKc_Aatyk Catalytic d 99.5 2.3E-14 5E-19 113.1 6.8 174 49-232 70-265 (269)
237 cd05096 PTKc_DDR1 Catalytic do 99.5 4.6E-14 9.9E-19 113.4 8.7 174 49-232 94-300 (304)
238 cd06623 PKc_MAPKK_plant_like C 99.5 2.5E-14 5.4E-19 112.3 6.9 174 50-233 75-256 (264)
239 cd08228 STKc_Nek6 Catalytic do 99.5 2.3E-14 5.1E-19 112.8 6.8 173 50-232 78-260 (267)
240 KOG0585 Ca2+/calmodulin-depend 99.5 4.2E-14 9.1E-19 114.8 8.2 174 47-231 183-370 (576)
241 cd06607 STKc_TAO Catalytic dom 99.5 6.7E-14 1.5E-18 112.7 9.4 171 50-233 91-267 (307)
242 cd07860 STKc_CDK2_3 Catalytic 99.5 1.1E-13 2.4E-18 110.0 10.5 137 97-233 115-281 (284)
243 cd07858 STKc_TEY_MAPK_plant Ca 99.5 2.3E-14 5E-19 116.9 6.6 137 97-233 123-291 (337)
244 cd05053 PTKc_FGFR Catalytic do 99.5 1.1E-14 2.4E-19 116.3 4.7 174 50-233 92-287 (293)
245 cd05055 PTKc_PDGFR Catalytic d 99.5 3.1E-14 6.8E-19 114.4 7.3 174 49-232 114-296 (302)
246 cd05057 PTKc_EGFR_like Catalyt 99.5 3.3E-14 7.2E-19 112.8 7.3 174 49-232 83-263 (279)
247 cd05034 PTKc_Src_like Catalyti 99.5 2.9E-14 6.4E-19 111.9 6.9 173 50-232 77-256 (261)
248 cd07835 STKc_CDK1_like Catalyt 99.5 6.8E-14 1.5E-18 111.1 9.1 137 97-233 114-280 (283)
249 KOG4717 Serine/threonine prote 99.5 2.2E-14 4.8E-19 117.8 6.2 179 44-233 87-270 (864)
250 cd05084 PTKc_Fes Catalytic dom 99.5 3.8E-14 8.1E-19 110.7 7.4 173 50-232 69-248 (252)
251 PHA03212 serine/threonine kina 99.5 1.2E-13 2.5E-18 114.9 10.7 136 97-233 197-376 (391)
252 cd06654 STKc_PAK1 Catalytic do 99.5 5.2E-14 1.1E-18 112.8 8.4 173 49-233 92-270 (296)
253 cd05073 PTKc_Hck Catalytic dom 99.5 3.7E-14 7.9E-19 111.4 7.3 174 49-232 75-255 (260)
254 cd05043 PTK_Ryk Pseudokinase d 99.5 3.1E-14 6.7E-19 113.0 6.9 135 97-232 132-271 (280)
255 cd05578 STKc_Yank1 Catalytic d 99.5 3.4E-14 7.3E-19 111.4 7.0 173 50-232 76-254 (258)
256 cd05611 STKc_Rim15_like Cataly 99.5 4.9E-14 1.1E-18 110.6 7.9 170 50-232 73-250 (260)
257 cd05624 STKc_MRCK_beta Catalyt 99.5 1.3E-14 2.9E-19 118.0 4.8 138 49-195 76-222 (331)
258 smart00219 TyrKc Tyrosine kina 99.5 8.4E-14 1.8E-18 108.8 9.1 175 49-233 76-257 (258)
259 cd06659 STKc_PAK6 Catalytic do 99.5 3.8E-14 8.3E-19 113.6 7.3 172 51-233 95-271 (297)
260 cd06615 PKc_MEK Catalytic doma 99.5 4.3E-14 9.4E-19 113.9 7.6 172 50-233 75-287 (308)
261 smart00750 KIND kinase non-cat 99.5 6.1E-14 1.3E-18 103.7 7.8 140 71-232 14-164 (176)
262 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.5 4.6E-14 9.9E-19 111.9 7.4 172 48-233 90-272 (274)
263 cd05572 STKc_cGK_PKG Catalytic 99.5 5.9E-14 1.3E-18 110.3 7.9 175 49-233 68-252 (262)
264 cd05085 PTKc_Fer Catalytic dom 99.5 4.1E-14 8.9E-19 110.3 7.0 176 49-232 67-246 (250)
265 cd05112 PTKc_Itk Catalytic dom 99.5 4.2E-14 9.1E-19 110.7 6.9 175 49-233 74-254 (256)
266 PF00069 Pkinase: Protein kina 99.5 8.8E-15 1.9E-19 114.6 3.0 174 51-233 75-257 (260)
267 cd07850 STKc_JNK Catalytic dom 99.5 1.5E-13 3.3E-18 112.8 10.3 136 97-233 133-311 (353)
268 cd05040 PTKc_Ack_like Catalyti 99.5 5.9E-14 1.3E-18 109.9 7.5 174 50-233 71-254 (257)
269 cd05045 PTKc_RET Catalytic dom 99.5 5E-14 1.1E-18 112.4 7.2 135 97-232 142-281 (290)
270 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.5 1.1E-13 2.3E-18 109.3 9.0 174 49-232 70-265 (269)
271 cd05039 PTKc_Csk_like Catalyti 99.5 6.6E-14 1.4E-18 109.6 7.7 171 50-232 76-251 (256)
272 cd06612 STKc_MST1_2 Catalytic 99.5 5.1E-14 1.1E-18 110.1 7.1 174 50-233 74-253 (256)
273 cd06640 STKc_MST4 Catalytic do 99.5 4.3E-14 9.3E-19 112.1 6.7 175 48-233 76-253 (277)
274 cd05056 PTKc_FAK Catalytic dom 99.5 5.6E-14 1.2E-18 110.9 7.3 173 50-232 82-260 (270)
275 cd08218 STKc_Nek1 Catalytic do 99.5 4.3E-14 9.3E-19 110.6 6.6 174 50-233 75-253 (256)
276 cd08530 STKc_CNK2-like Catalyt 99.5 1.5E-13 3.2E-18 107.4 9.6 173 50-233 75-253 (256)
277 cd05098 PTKc_FGFR1 Catalytic d 99.5 5.1E-14 1.1E-18 113.4 7.1 181 49-232 99-294 (307)
278 cd05037 PTK_Jak_rpt1 Pseudokin 99.5 5.2E-14 1.1E-18 110.2 7.0 172 48-233 74-257 (259)
279 KOG0200 Fibroblast/platelet-de 99.5 3.3E-14 7.2E-19 124.0 6.3 197 33-232 352-574 (609)
280 cd05065 PTKc_EphR_B Catalytic 99.5 4.4E-14 9.5E-19 111.5 6.5 173 50-232 81-263 (269)
281 cd07849 STKc_ERK1_2_like Catal 99.5 1.1E-13 2.5E-18 112.8 9.0 137 97-233 121-292 (336)
282 KOG0610 Putative serine/threon 99.5 5.9E-14 1.3E-18 112.1 7.1 142 48-199 151-353 (459)
283 cd05580 STKc_PKA Catalytic dom 99.5 7.5E-14 1.6E-18 111.4 7.8 169 50-231 77-252 (290)
284 cd07866 STKc_BUR1 Catalytic do 99.5 1.8E-13 4E-18 110.0 10.1 137 97-233 130-308 (311)
285 KOG0612 Rho-associated, coiled 99.5 2.3E-14 4.9E-19 126.6 4.9 156 48-212 149-315 (1317)
286 cd07852 STKc_MAPK15 Catalytic 99.5 1.3E-13 2.9E-18 112.4 9.1 137 97-233 122-295 (337)
287 PHA03390 pk1 serine/threonine- 99.5 8.2E-14 1.8E-18 110.0 7.5 172 49-233 84-262 (267)
288 cd05100 PTKc_FGFR3 Catalytic d 99.5 8.2E-14 1.8E-18 113.5 7.7 173 50-232 94-288 (334)
289 cd06917 STKc_NAK1_like Catalyt 99.5 6.1E-14 1.3E-18 111.1 6.7 172 50-232 78-254 (277)
290 cd06653 STKc_MEKK3_like_1 Cata 99.5 8.2E-14 1.8E-18 109.6 7.4 172 51-233 83-261 (264)
291 cd06610 STKc_OSR1_SPAK Catalyt 99.5 7.5E-14 1.6E-18 109.8 7.2 174 51-233 76-264 (267)
292 cd05066 PTKc_EphR_A Catalytic 99.5 6.4E-14 1.4E-18 110.5 6.8 174 49-232 80-261 (267)
293 cd07857 STKc_MPK1 Catalytic do 99.5 1.6E-13 3.5E-18 111.7 9.2 137 97-233 120-292 (332)
294 cd06614 STKc_PAK Catalytic dom 99.5 9.9E-14 2.1E-18 110.5 7.8 175 49-233 90-270 (286)
295 cd06655 STKc_PAK2 Catalytic do 99.5 1.2E-13 2.7E-18 110.6 8.4 172 51-233 93-269 (296)
296 cd05577 STKc_GRK Catalytic dom 99.5 6.2E-14 1.4E-18 111.1 6.4 170 50-229 69-245 (277)
297 PHA03209 serine/threonine kina 99.5 6.4E-14 1.4E-18 115.2 6.6 136 97-233 172-351 (357)
298 cd07836 STKc_Pho85 Catalytic d 99.5 8.3E-14 1.8E-18 110.6 7.1 137 97-233 115-281 (284)
299 cd05041 PTKc_Fes_like Catalyti 99.5 5.9E-14 1.3E-18 109.5 6.1 174 50-233 68-248 (251)
300 cd05090 PTKc_Ror1 Catalytic do 99.5 2.9E-13 6.2E-18 107.6 10.1 135 97-232 139-278 (283)
301 cd05044 PTKc_c-ros Catalytic d 99.5 1.5E-13 3.3E-18 108.3 8.4 174 49-232 74-265 (269)
302 cd08224 STKc_Nek6_Nek7 Catalyt 99.5 1E-13 2.2E-18 109.0 7.3 173 50-232 78-260 (267)
303 PLN00009 cyclin-dependent kina 99.5 4.2E-13 9E-18 107.3 10.9 137 97-233 117-284 (294)
304 cd07870 STKc_PFTAIRE2 Catalyti 99.5 1.3E-13 2.8E-18 110.1 7.9 137 97-233 118-288 (291)
305 cd07865 STKc_CDK9 Catalytic do 99.5 1E-13 2.2E-18 111.4 7.4 137 97-233 134-307 (310)
306 cd08227 PK_STRAD_alpha Pseudok 99.5 9.7E-14 2.1E-18 112.7 7.3 176 49-233 74-307 (327)
307 cd08215 STKc_Nek Catalytic dom 99.5 1E-13 2.3E-18 108.2 7.2 174 50-233 75-255 (258)
308 cd06622 PKc_MAPKK_PBS2_like Ca 99.5 1.8E-13 4E-18 108.9 8.6 173 51-233 76-262 (286)
309 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.5 1.2E-13 2.6E-18 109.8 7.6 173 49-232 83-276 (283)
310 KOG4279 Serine/threonine prote 99.5 3.9E-14 8.5E-19 120.0 4.8 164 58-232 656-831 (1226)
311 cd06619 PKc_MKK5 Catalytic dom 99.5 8.3E-14 1.8E-18 110.6 6.4 169 50-233 75-253 (279)
312 cd06635 STKc_TAO1 Catalytic do 99.5 1.9E-13 4.2E-18 110.5 8.6 134 97-233 140-277 (317)
313 cd06626 STKc_MEKK4 Catalytic d 99.5 2.3E-13 5E-18 106.9 8.8 175 50-233 75-261 (264)
314 cd05050 PTKc_Musk Catalytic do 99.5 1.3E-13 2.9E-18 109.8 7.5 135 97-232 145-284 (288)
315 cd05574 STKc_phototropin_like 99.5 1.2E-13 2.6E-18 111.6 7.2 174 50-233 77-289 (316)
316 cd07879 STKc_p38delta_MAPK13 C 99.5 3.8E-13 8.2E-18 110.0 10.1 135 97-233 132-297 (342)
317 cd05105 PTKc_PDGFR_alpha Catal 99.5 2.2E-13 4.8E-18 113.5 8.9 134 97-231 252-391 (400)
318 cd06616 PKc_MKK4 Catalytic dom 99.5 2.5E-13 5.5E-18 108.2 8.9 137 97-233 122-267 (288)
319 cd06633 STKc_TAO3 Catalytic do 99.5 1.8E-13 4E-18 110.5 8.1 134 97-233 136-273 (313)
320 cd05086 PTKc_Aatyk2 Catalytic 99.5 2.2E-13 4.7E-18 107.6 8.3 174 49-232 70-264 (268)
321 cd07844 STKc_PCTAIRE_like Cata 99.5 1.2E-13 2.5E-18 110.3 6.7 174 50-233 79-288 (291)
322 cd06656 STKc_PAK3 Catalytic do 99.5 9.8E-14 2.1E-18 111.2 6.2 172 50-233 92-269 (297)
323 cd08528 STKc_Nek10 Catalytic d 99.5 2.2E-13 4.8E-18 107.4 8.1 174 49-232 84-265 (269)
324 cd06642 STKc_STK25-YSK1 Cataly 99.5 9.2E-14 2E-18 110.1 5.9 173 50-233 78-253 (277)
325 cd06617 PKc_MKK3_6 Catalytic d 99.5 2.6E-13 5.6E-18 107.8 8.5 137 97-233 118-261 (283)
326 cd05122 PKc_STE Catalytic doma 99.5 2E-13 4.3E-18 106.2 7.6 174 50-233 73-251 (253)
327 cd07842 STKc_CDK8_like Catalyt 99.5 1.3E-13 2.9E-18 111.1 6.8 137 97-233 123-313 (316)
328 cd06652 STKc_MEKK2 Catalytic d 99.5 1.7E-13 3.6E-18 107.9 7.0 172 51-233 83-261 (265)
329 cd07851 STKc_p38 Catalytic dom 99.4 5.3E-13 1.2E-17 109.1 10.1 135 97-233 133-298 (343)
330 cd08222 STKc_Nek11 Catalytic d 99.4 3.1E-13 6.8E-18 106.0 8.4 174 50-233 78-257 (260)
331 cd05061 PTKc_InsR Catalytic do 99.4 2.8E-13 6.2E-18 108.0 8.2 175 48-232 83-273 (288)
332 KOG0603 Ribosomal protein S6 k 99.4 3E-13 6.4E-18 113.4 8.4 169 48-232 390-562 (612)
333 cd06621 PKc_MAPKK_Pek1_like Ca 99.4 3.9E-13 8.4E-18 107.2 8.8 173 50-233 77-266 (287)
334 cd05095 PTKc_DDR2 Catalytic do 99.4 2.3E-13 5E-18 109.0 7.6 181 49-232 94-292 (296)
335 cd05609 STKc_MAST Catalytic do 99.4 2.9E-13 6.4E-18 108.8 8.2 169 50-228 77-265 (305)
336 cd08225 STKc_Nek5 Catalytic do 99.4 2.3E-13 5.1E-18 106.4 7.4 174 50-233 75-254 (257)
337 cd06620 PKc_MAPKK_Byr1_like Ca 99.4 2.4E-13 5.2E-18 108.2 7.5 173 49-232 78-265 (284)
338 cd08229 STKc_Nek7 Catalytic do 99.4 2.4E-13 5.1E-18 107.1 7.3 172 51-232 79-260 (267)
339 cd06634 STKc_TAO2 Catalytic do 99.4 1.7E-13 3.7E-18 110.4 6.6 134 97-233 130-267 (308)
340 cd05051 PTKc_DDR Catalytic dom 99.4 2.8E-13 6.2E-18 108.3 7.7 135 97-232 145-292 (296)
341 cd05579 STKc_MAST_like Catalyt 99.4 3.4E-13 7.4E-18 105.7 7.7 173 51-233 70-257 (265)
342 KOG0580 Serine/threonine prote 99.4 1.7E-13 3.8E-18 102.3 5.6 171 50-232 98-272 (281)
343 cd05103 PTKc_VEGFR2 Catalytic 99.4 3E-13 6.6E-18 110.6 7.4 135 97-232 194-334 (343)
344 cd06629 STKc_MAPKKK_Bck1_like 99.4 4.9E-13 1.1E-17 105.6 8.3 176 49-233 83-269 (272)
345 cd06630 STKc_MEKK1 Catalytic d 99.4 4.1E-13 8.9E-18 105.7 7.7 174 50-233 79-264 (268)
346 KOG1006 Mitogen-activated prot 99.4 6E-14 1.3E-18 106.4 2.7 129 102-232 188-326 (361)
347 cd08216 PK_STRAD Pseudokinase 99.4 4.1E-13 8.8E-18 108.3 7.6 175 50-233 75-295 (314)
348 cd06627 STKc_Cdc7_like Catalyt 99.4 5.4E-13 1.2E-17 104.0 7.8 174 50-233 75-251 (254)
349 KOG0670 U4/U6-associated splic 99.4 7.4E-14 1.6E-18 114.7 2.8 101 97-199 550-653 (752)
350 cd07854 STKc_MAPK4_6 Catalytic 99.4 1.1E-12 2.3E-17 107.3 9.7 172 51-233 93-300 (342)
351 KOG0604 MAP kinase-activated p 99.4 4.7E-13 1E-17 103.2 6.9 165 66-233 145-322 (400)
352 cd05123 STKc_AGC Catalytic dom 99.4 9.2E-13 2E-17 102.6 8.8 173 50-233 69-247 (250)
353 cd05046 PTK_CCK4 Pseudokinase 99.4 4.2E-13 9.2E-18 106.1 6.8 175 48-232 82-271 (275)
354 KOG0199 ACK and related non-re 99.4 6E-13 1.3E-17 112.9 8.0 169 49-231 185-366 (1039)
355 KOG0579 Ste20-like serine/thre 99.4 7.4E-13 1.6E-17 111.4 8.4 137 97-233 145-289 (1187)
356 PHA03211 serine/threonine kina 99.4 3.4E-13 7.5E-18 114.0 6.6 136 97-233 275-455 (461)
357 KOG4257 Focal adhesion tyrosin 99.4 8.7E-14 1.9E-18 116.6 2.8 171 50-230 466-642 (974)
358 cd06606 STKc_MAPKKK Catalytic 99.4 5.7E-13 1.2E-17 104.0 7.2 174 50-233 77-257 (260)
359 cd07877 STKc_p38alpha_MAPK14 C 99.4 1.1E-12 2.3E-17 107.5 9.1 135 97-233 135-300 (345)
360 cd06618 PKc_MKK7 Catalytic dom 99.4 1.5E-12 3.3E-17 104.2 9.9 137 97-233 129-273 (296)
361 cd05097 PTKc_DDR_like Catalyti 99.4 7.4E-13 1.6E-17 106.0 7.7 174 49-232 92-291 (295)
362 cd06624 STKc_ASK Catalytic dom 99.4 9.2E-13 2E-17 103.9 7.8 175 50-233 81-265 (268)
363 cd08226 PK_STRAD_beta Pseudoki 99.4 5.7E-13 1.2E-17 108.3 6.7 176 49-233 74-308 (328)
364 cd05576 STKc_RPK118_like Catal 99.4 4E-13 8.7E-18 104.2 5.5 162 49-227 60-223 (237)
365 KOG4250 TANK binding protein k 99.4 3.4E-13 7.5E-18 114.2 5.2 131 48-183 91-226 (732)
366 KOG0690 Serine/threonine prote 99.4 2.5E-13 5.4E-18 105.9 3.7 128 76-213 270-400 (516)
367 cd06647 STKc_PAK_I Catalytic d 99.4 5.9E-13 1.3E-17 106.5 5.9 172 50-233 92-269 (293)
368 KOG1094 Discoidin domain recep 99.4 2.5E-12 5.4E-17 107.1 9.3 171 50-230 611-797 (807)
369 cd06641 STKc_MST3 Catalytic do 99.4 1E-12 2.2E-17 104.2 6.7 173 49-233 77-253 (277)
370 cd05613 STKc_MSK1_N N-terminal 99.4 1.1E-12 2.5E-17 104.6 7.0 173 50-231 81-266 (290)
371 KOG1187 Serine/threonine prote 99.4 2.5E-13 5.5E-18 111.1 3.3 175 49-231 147-346 (361)
372 cd05581 STKc_PDK1 Catalytic do 99.4 1.6E-12 3.6E-17 102.8 7.6 172 51-233 79-277 (280)
373 PHA03210 serine/threonine kina 99.4 3.8E-12 8.2E-17 109.1 10.3 136 97-233 282-454 (501)
374 smart00220 S_TKc Serine/Threon 99.4 1.9E-12 4.1E-17 99.9 7.7 174 50-233 63-241 (244)
375 cd05107 PTKc_PDGFR_beta Cataly 99.4 5.4E-12 1.2E-16 105.2 10.6 135 97-232 254-394 (401)
376 cd05074 PTKc_Tyro3 Catalytic d 99.4 3.5E-12 7.6E-17 100.7 9.0 135 97-232 128-267 (273)
377 cd07856 STKc_Sty1_Hog1 Catalyt 99.4 7.6E-12 1.7E-16 101.7 11.0 135 97-233 123-288 (328)
378 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.4 1.8E-12 4E-17 103.0 7.2 173 50-232 83-278 (284)
379 cd07880 STKc_p38gamma_MAPK12 C 99.4 1.9E-12 4E-17 106.0 7.3 135 97-233 133-298 (343)
380 cd06657 STKc_PAK4 Catalytic do 99.3 2.4E-12 5.3E-17 102.9 7.6 173 50-233 93-270 (292)
381 cd05079 PTKc_Jak1_rpt2 Catalyt 99.3 1.6E-12 3.4E-17 103.5 6.4 174 49-232 83-278 (284)
382 PRK13184 pknD serine/threonine 99.3 2.7E-12 5.8E-17 114.7 8.3 171 50-225 78-277 (932)
383 KOG1035 eIF-2alpha kinase GCN2 99.3 2E-12 4.4E-17 115.3 7.4 141 79-233 703-871 (1351)
384 cd05038 PTKc_Jak_rpt2 Catalyti 99.3 1.7E-12 3.7E-17 103.0 5.8 174 49-232 83-278 (284)
385 PLN00181 protein SPA1-RELATED; 99.3 2.5E-12 5.4E-17 116.0 7.2 138 83-233 90-265 (793)
386 KOG1024 Receptor-like protein 99.3 6.6E-12 1.4E-16 100.2 8.6 134 97-231 411-549 (563)
387 cd05583 STKc_MSK_N N-terminal 99.3 5.3E-12 1.2E-16 100.6 8.0 172 50-230 81-260 (288)
388 PF13041 PPR_2: PPR repeat fam 99.3 2.1E-12 4.5E-17 75.0 4.0 46 43-88 1-50 (50)
389 KOG0587 Traf2- and Nck-interac 99.3 1.4E-12 3E-17 112.9 4.2 170 50-232 97-281 (953)
390 KOG0695 Serine/threonine prote 99.3 1.1E-11 2.4E-16 97.3 8.0 119 54-182 331-452 (593)
391 KOG4278 Protein tyrosine kinas 99.3 1E-11 2.2E-16 104.5 7.8 132 97-230 380-516 (1157)
392 KOG4236 Serine/threonine prote 99.2 1.1E-12 2.3E-17 108.3 -0.3 118 97-217 679-800 (888)
393 PLN03225 Serine/threonine-prot 99.2 2.6E-11 5.6E-16 105.1 7.9 135 97-233 270-450 (566)
394 PF12854 PPR_1: PPR repeat 99.2 1.5E-11 3.2E-16 64.9 3.7 33 40-72 2-34 (34)
395 KOG0586 Serine/threonine prote 99.2 4.9E-12 1.1E-16 105.7 1.4 134 50-192 131-266 (596)
396 KOG3653 Transforming growth fa 99.2 2.5E-11 5.4E-16 98.8 5.4 169 51-228 285-494 (534)
397 KOG0608 Warts/lats-like serine 99.2 1.6E-11 3.5E-16 103.4 4.1 100 97-197 744-887 (1034)
398 KOG0671 LAMMER dual specificit 99.2 4E-11 8.7E-16 95.2 5.1 121 66-198 176-326 (415)
399 KOG0984 Mitogen-activated prot 99.1 1.1E-10 2.5E-15 85.8 6.7 99 97-195 163-267 (282)
400 PLN00113 leucine-rich repeat r 99.1 2.4E-11 5.2E-16 112.1 4.0 166 50-232 759-946 (968)
401 KOG1025 Epidermal growth facto 99.1 5.6E-10 1.2E-14 96.7 11.1 172 49-231 772-951 (1177)
402 PF12854 PPR_1: PPR repeat 99.1 4E-11 8.7E-16 63.2 2.1 34 4-37 1-34 (34)
403 KOG1027 Serine/threonine prote 99.0 1.8E-10 3.9E-15 99.6 3.9 137 83-233 616-767 (903)
404 smart00221 STYKc Protein kinas 99.0 1.3E-09 2.9E-14 83.1 7.5 126 49-183 72-202 (225)
405 KOG1151 Tousled-like protein k 98.9 1.5E-09 3.3E-14 88.4 5.0 176 44-229 539-737 (775)
406 KOG2052 Activin A type IB rece 98.9 2.4E-09 5.2E-14 86.9 5.4 175 43-226 278-492 (513)
407 PLN03224 probable serine/threo 98.9 1.6E-08 3.4E-13 86.3 9.9 137 97-233 324-500 (507)
408 cd05610 STKc_MASTL Catalytic d 98.7 2.9E-08 6.2E-13 88.2 7.5 112 121-233 518-634 (669)
409 KOG0607 MAP kinase-interacting 98.7 5.6E-08 1.2E-12 76.3 7.7 136 97-232 191-360 (463)
410 KOG0576 Mitogen-activated prot 98.7 9.1E-09 2E-13 87.5 3.3 170 53-232 91-270 (829)
411 KOG1167 Serine/threonine prote 98.7 2.5E-08 5.4E-13 80.5 4.1 102 97-198 147-296 (418)
412 KOG0590 Checkpoint kinase and 98.6 2.2E-08 4.9E-13 87.1 3.2 146 79-233 426-585 (601)
413 cd00180 PKc Catalytic domain o 98.5 1.4E-07 3.1E-12 70.7 5.2 117 49-174 66-187 (215)
414 TIGR00756 PPR pentatricopeptid 98.5 1.2E-07 2.5E-12 50.1 2.6 34 11-44 1-34 (35)
415 KOG1152 Signal transduction se 98.4 9.3E-08 2E-12 80.4 2.3 86 97-183 685-771 (772)
416 PF01535 PPR: PPR repeat; Int 98.4 3.8E-07 8.2E-12 46.8 2.8 31 11-41 1-31 (31)
417 KOG0603 Ribosomal protein S6 k 98.4 1.9E-07 4.1E-12 79.1 2.2 90 96-195 111-201 (612)
418 PF13812 PPR_3: Pentatricopept 98.4 4.8E-07 1E-11 47.5 3.0 34 10-43 1-34 (34)
419 KOG0606 Microtubule-associated 98.3 6.8E-07 1.5E-11 80.1 5.1 102 97-199 158-276 (1205)
420 TIGR00756 PPR pentatricopeptid 98.3 5E-07 1.1E-11 47.6 2.4 34 77-111 1-34 (35)
421 KOG0195 Integrin-linked kinase 98.3 1.9E-06 4.1E-11 66.5 5.8 93 140-232 346-441 (448)
422 PF01535 PPR: PPR repeat; Int 98.2 1.4E-06 3E-11 44.6 2.7 30 46-75 1-30 (31)
423 PF14531 Kinase-like: Kinase-l 98.1 1.1E-06 2.4E-11 69.4 2.0 118 97-221 160-285 (288)
424 COG0515 SPS1 Serine/threonine 98.1 9.8E-06 2.1E-10 64.8 7.5 140 50-198 74-231 (384)
425 KOG1290 Serine/threonine prote 98.1 5.2E-06 1.1E-10 68.8 5.2 78 118-198 391-474 (590)
426 KOG1345 Serine/threonine kinas 98.1 2.9E-06 6.2E-11 65.5 3.0 130 51-192 99-236 (378)
427 KOG1240 Protein kinase contain 98.1 6.5E-06 1.4E-10 74.4 5.6 167 48-233 95-291 (1431)
428 PF13812 PPR_3: Pentatricopept 98.0 3.4E-06 7.4E-11 44.1 2.1 33 77-110 2-34 (34)
429 KOG1033 eIF-2alpha kinase PEK/ 98.0 4E-06 8.7E-11 69.9 3.2 119 49-176 331-457 (516)
430 KOG1023 Natriuretic peptide re 97.9 2.1E-05 4.6E-10 66.4 5.8 172 50-232 23-219 (484)
431 KOG4422 Uncharacterized conser 97.8 4.5E-05 9.8E-10 62.4 6.2 61 1-61 264-328 (625)
432 KOG4158 BRPK/PTEN-induced prot 97.8 0.00015 3.3E-09 59.1 8.6 129 97-226 356-503 (598)
433 KOG4318 Bicoid mRNA stability 97.8 1.3E-05 2.8E-10 70.7 2.0 85 2-94 17-101 (1088)
434 KOG4422 Uncharacterized conser 97.7 8.5E-05 1.8E-09 60.9 5.9 100 9-113 206-313 (625)
435 cd05610 STKc_MASTL Catalytic d 97.5 2.7E-05 5.9E-10 69.4 1.2 111 49-168 79-192 (669)
436 KOG1166 Mitotic checkpoint ser 97.5 0.00019 4.1E-09 65.3 6.1 120 49-178 769-900 (974)
437 KOG1164 Casein kinase (serine/ 97.5 0.0012 2.7E-08 53.6 10.0 92 97-189 137-245 (322)
438 PRK11788 tetratricopeptide rep 97.5 0.00035 7.6E-09 58.1 6.6 102 11-115 215-318 (389)
439 PRK11788 tetratricopeptide rep 97.3 0.0017 3.6E-08 54.0 8.4 117 13-133 183-306 (389)
440 KOG1165 Casein kinase (serine/ 96.8 0.0071 1.5E-07 48.6 7.4 101 97-199 139-253 (449)
441 KOG0590 Checkpoint kinase and 96.8 0.00041 8.9E-09 60.9 0.5 174 49-231 96-284 (601)
442 PRK12274 serine/threonine prot 96.5 0.0065 1.4E-07 46.1 5.3 120 50-184 74-210 (218)
443 cd05145 RIO1_like RIO kinase f 95.8 0.0051 1.1E-07 46.0 1.8 76 49-133 92-169 (190)
444 cd05147 RIO1_euk RIO kinase fa 95.8 0.0031 6.6E-08 47.2 0.6 74 49-131 92-167 (190)
445 KOG1163 Casein kinase (serine/ 95.8 0.029 6.4E-07 43.2 5.7 122 97-219 126-266 (341)
446 PF10037 MRP-S27: Mitochondria 95.6 0.038 8.3E-07 46.4 6.4 61 12-72 105-165 (429)
447 PF06239 ECSIT: Evolutionarily 95.6 0.024 5.3E-07 42.8 4.6 61 1-61 78-154 (228)
448 PF12895 Apc3: Anaphase-promot 95.4 0.078 1.7E-06 33.7 6.1 79 23-101 2-83 (84)
449 TIGR02917 PEP_TPR_lipo putativ 95.4 0.083 1.8E-06 48.4 8.5 90 11-101 602-694 (899)
450 COG4248 Uncharacterized protei 95.3 0.098 2.1E-06 43.8 7.4 88 97-184 132-225 (637)
451 PRK09188 serine/threonine prot 95.2 0.039 8.5E-07 45.6 5.2 89 49-153 93-193 (365)
452 PRK10359 lipopolysaccharide co 95.2 0.011 2.5E-07 45.5 1.9 95 49-172 118-213 (232)
453 PRK15359 type III secretion sy 95.2 0.14 3E-06 36.4 7.3 88 13-101 27-117 (144)
454 TIGR02917 PEP_TPR_lipo putativ 95.2 0.099 2.1E-06 47.8 8.2 54 48-101 570-626 (899)
455 cd00189 TPR Tetratricopeptide 95.0 0.14 3E-06 32.0 6.5 88 13-101 3-93 (100)
456 PF10037 MRP-S27: Mitochondria 95.0 0.12 2.5E-06 43.6 7.2 108 7-115 63-176 (429)
457 PF08579 RPM2: Mitochondrial r 94.9 0.074 1.6E-06 35.9 4.8 56 2-57 52-116 (120)
458 PF08579 RPM2: Mitochondrial r 94.9 0.25 5.5E-06 33.4 7.2 75 14-88 29-116 (120)
459 PF12921 ATP13: Mitochondrial 94.5 0.11 2.4E-06 36.0 5.1 76 9-84 1-96 (126)
460 TIGR02552 LcrH_SycD type III s 94.2 0.33 7.1E-06 33.6 7.3 88 13-101 20-110 (135)
461 PF06239 ECSIT: Evolutionarily 94.2 0.15 3.3E-06 38.6 5.5 85 7-92 44-154 (228)
462 PF05843 Suf: Suppressor of fo 93.8 0.28 6E-06 39.1 6.8 89 12-101 3-95 (280)
463 TIGR02795 tol_pal_ybgF tol-pal 93.4 1.1 2.3E-05 29.9 8.5 90 12-101 4-101 (119)
464 PF14559 TPR_19: Tetratricopep 93.3 0.6 1.3E-05 27.9 6.4 51 22-73 3-53 (68)
465 PF13429 TPR_15: Tetratricopep 93.2 0.29 6.2E-06 38.8 6.0 88 11-98 111-202 (280)
466 COG5107 RNA14 Pre-mRNA 3'-end 93.1 0.28 6.1E-06 41.3 5.8 90 11-101 398-491 (660)
467 TIGR02521 type_IV_pilW type IV 93.1 0.77 1.7E-05 34.4 8.2 91 11-102 32-125 (234)
468 TIGR02521 type_IV_pilW type IV 93.1 0.78 1.7E-05 34.3 8.2 91 10-101 65-160 (234)
469 PF09976 TPR_21: Tetratricopep 93.1 0.97 2.1E-05 32.0 8.1 87 13-100 15-109 (145)
470 PF13429 TPR_15: Tetratricopep 93.0 0.21 4.6E-06 39.6 5.1 122 7-132 143-271 (280)
471 PRK09605 bifunctional UGMP fam 92.3 0.088 1.9E-06 46.1 2.2 67 49-131 411-477 (535)
472 PF04733 Coatomer_E: Coatomer 92.2 0.79 1.7E-05 36.8 7.3 107 19-133 111-225 (290)
473 PRK10370 formate-dependent nit 92.2 1.7 3.7E-05 32.7 8.7 92 9-101 72-169 (198)
474 KOG0606 Microtubule-associated 91.5 0.27 5.8E-06 45.7 4.2 52 138-190 993-1044(1205)
475 KOG1914 mRNA cleavage and poly 91.5 1.1 2.5E-05 38.5 7.6 103 6-111 363-469 (656)
476 PLN03088 SGT1, suppressor of 91.2 1.1 2.4E-05 37.1 7.4 81 20-101 12-95 (356)
477 TIGR00990 3a0801s09 mitochondr 91.2 1.2 2.6E-05 39.8 8.1 89 12-101 367-458 (615)
478 KOG4318 Bicoid mRNA stability 91.1 0.3 6.6E-06 44.3 4.0 83 7-92 201-287 (1088)
479 PRK15174 Vi polysaccharide exp 90.8 1.6 3.5E-05 39.4 8.4 91 10-101 284-377 (656)
480 PRK11189 lipoprotein NlpI; Pro 90.6 2.1 4.6E-05 34.3 8.3 82 19-101 73-157 (296)
481 PRK01723 3-deoxy-D-manno-octul 90.6 0.55 1.2E-05 36.5 4.8 43 79-130 148-191 (239)
482 PRK12370 invasion protein regu 90.4 1.6 3.5E-05 38.4 8.1 121 10-133 338-465 (553)
483 PRK14879 serine/threonine prot 90.3 0.25 5.4E-06 37.2 2.7 69 49-130 74-143 (211)
484 PF13432 TPR_16: Tetratricopep 90.2 1.1 2.4E-05 26.5 5.0 47 55-101 7-56 (65)
485 TIGR03724 arch_bud32 Kae1-asso 90.1 0.32 6.9E-06 36.3 3.0 66 50-130 73-138 (199)
486 PRK12370 invasion protein regu 90.0 2.2 4.8E-05 37.6 8.6 79 22-101 316-397 (553)
487 PRK09782 bacteriophage N4 rece 89.8 1.9 4.1E-05 40.7 8.3 104 7-114 606-712 (987)
488 PF00637 Clathrin: Region in C 89.1 0.75 1.6E-05 32.3 4.2 84 15-101 12-95 (143)
489 TIGR00990 3a0801s09 mitochondr 89.1 2.5 5.3E-05 37.8 8.3 98 11-113 332-433 (615)
490 cd05144 RIO2_C RIO kinase fami 88.9 0.98 2.1E-05 33.7 4.9 36 97-132 140-176 (198)
491 PF13432 TPR_16: Tetratricopep 88.8 0.92 2E-05 26.9 3.9 54 19-73 6-59 (65)
492 KOG3941 Intermediate in Toll s 88.3 0.67 1.5E-05 36.7 3.6 67 1-67 98-181 (406)
493 PF14559 TPR_19: Tetratricopep 88.2 0.74 1.6E-05 27.5 3.2 46 56-101 2-50 (68)
494 cd05119 RIO RIO kinase family, 88.0 1.2 2.6E-05 32.7 4.9 37 97-133 129-166 (187)
495 KOG2003 TPR repeat-containing 88.0 1.7 3.7E-05 36.8 6.0 109 2-114 583-695 (840)
496 smart00090 RIO RIO-like kinase 87.8 0.78 1.7E-05 35.6 3.8 35 97-131 163-198 (237)
497 KOG3616 Selective LIM binding 87.4 1.6 3.5E-05 39.3 5.7 78 15-101 770-849 (1636)
498 PRK11447 cellulose synthase su 87.3 4.1 8.8E-05 39.4 9.0 87 14-101 607-696 (1157)
499 CHL00033 ycf3 photosystem I as 87.2 6.1 0.00013 28.5 8.1 87 13-99 38-136 (168)
500 PRK15174 Vi polysaccharide exp 87.1 3.2 7E-05 37.4 7.8 85 16-101 218-309 (656)
No 1
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-28 Score=197.43 Aligned_cols=176 Identities=46% Similarity=0.855 Sum_probs=157.2
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
.+|.+|+++..++-...--+-.++.++..|-.+ +.|+. ++|+.+..|||++|.|+++. ....+++|||+
T Consensus 86 ~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~---------hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGL 156 (538)
T KOG0661|consen 86 YFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLA---------HIHKHGFFHRDLKPENILISGNDVIKIADFGL 156 (538)
T ss_pred eeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHH---------HHHhcCcccccCChhheEecccceeEeccccc
Confidence 578888888766554333222334466677776 88898 99999999999999999996 77899999999
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcc
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPL 207 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 207 (234)
|+++...-+...++.++||+|||++.....|+..+|+||+||+++|+.+.+++|||....|++++||+.+|.|+..+|++
T Consensus 157 ARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 157 AREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred ccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchh
Confidence 99999988999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccccCCCCCccccccCCCC
Q 026720 208 GIQLASNLNWKLPQMGGVNLLAVMPSA 234 (234)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (234)
..++...|...+|+..+.++..++|.+
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p~~ 263 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLPNA 263 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCccc
Confidence 999999999999999999999999864
No 2
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=99.93 E-value=2.5e-27 Score=209.81 Aligned_cols=203 Identities=23% Similarity=0.322 Sum_probs=168.5
Q ss_pred CccCCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHH
Q 026720 1 MKLANENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 80 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~ 80 (234)
|...|+.||..||+++|.+|++.+.++.|+++|..+.+.|+.+|..++|+||++|+++|++++|.++|+.|+++|+++||
T Consensus 215 M~~~g~~p~~~t~~~ll~a~~~~~~~~~~~~l~~~~~~~g~~~d~~~~n~Li~~y~k~g~~~~A~~vf~~m~~~~~vt~n 294 (697)
T PLN03081 215 MWEDGSDAEPRTFVVMLRASAGLGSARAGQQLHCCVLKTGVVGDTFVSCALIDMYSKCGDIEDARCVFDGMPEKTTVAWN 294 (697)
T ss_pred HHHhCCCCChhhHHHHHHHHhcCCcHHHHHHHHHHHHHhCCCccceeHHHHHHHHHHCCCHHHHHHHHHhCCCCChhHHH
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccCCCCCCCcccCcccccccccccccC
Q 026720 81 IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEI 157 (234)
Q Consensus 81 ~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 157 (234)
++|.+|+++|+.++|+.+|.+ |...|+.|+..++. .++++.+.+..+.+++..+...+.. |+...
T Consensus 295 ~li~~y~~~g~~~eA~~lf~~-M~~~g~~pd~~t~~~ll~a~~~~g~~~~a~~i~~~m~~~g~~-------~d~~~---- 362 (697)
T PLN03081 295 SMLAGYALHGYSEEALCLYYE-MRDSGVSIDQFTFSIMIRIFSRLALLEHAKQAHAGLIRTGFP-------LDIVA---- 362 (697)
T ss_pred HHHHHHHhCCCHHHHHHHHHH-HHHcCCCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHhCCC-------CCeee----
Confidence 999999999999999999999 67789999999984 4567888888888887765443322 55544
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhh-------------hhhhhccccCCCCC
Q 026720 158 YGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQ-------------LASNLNWKLPQMGG 224 (234)
Q Consensus 158 ~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 224 (234)
|+.++|+|+. .+..+.+.++|+.|..++..+|+..+. .+.+|...+...+.
T Consensus 363 ~~~Li~~y~k----------------~G~~~~A~~vf~~m~~~d~~t~n~lI~~y~~~G~~~~A~~lf~~M~~~g~~Pd~ 426 (697)
T PLN03081 363 NTALVDLYSK----------------WGRMEDARNVFDRMPRKNLISWNALIAGYGNHGRGTKAVEMFERMIAEGVAPNH 426 (697)
T ss_pred hHHHHHHHHH----------------CCCHHHHHHHHHhCCCCCeeeHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCH
Confidence 7899999998 678899999999999999999985444 34444445555555
Q ss_pred ccccccC
Q 026720 225 VNLLAVM 231 (234)
Q Consensus 225 ~~~~~~~ 231 (234)
.+|..++
T Consensus 427 ~T~~~ll 433 (697)
T PLN03081 427 VTFLAVL 433 (697)
T ss_pred HHHHHHH
Confidence 5555443
No 3
>PLN03077 Protein ECB2; Provisional
Probab=99.93 E-value=1.2e-26 Score=209.72 Aligned_cols=183 Identities=25% Similarity=0.391 Sum_probs=161.0
Q ss_pred CccCCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHH
Q 026720 1 MKLANENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 80 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~ 80 (234)
|...|+.||.+||+++|.+|++.++++.|+++|.+|++.|+.||..+||+||.+|+++|++++|.++|++|+.+|+++||
T Consensus 279 M~~~g~~Pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~~~~n~Li~~y~k~g~~~~A~~vf~~m~~~d~~s~n 358 (857)
T PLN03077 279 MRELSVDPDLMTITSVISACELLGDERLGREMHGYVVKTGFAVDVSVCNSLIQMYLSLGSWGEAEKVFSRMETKDAVSWT 358 (857)
T ss_pred HHHcCCCCChhHHHHHHHHHHhcCChHHHHHHHHHHHHhCCccchHHHHHHHHHHHhcCCHHHHHHHHhhCCCCCeeeHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccCCCCCCCcccCcccccccccccccC
Q 026720 81 IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEI 157 (234)
Q Consensus 81 ~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 157 (234)
++|.+|+++|+.++|+.+|.+ |...++.|+..++. .++++.+++..+.+++..+...+.. |+...
T Consensus 359 ~li~~~~~~g~~~~A~~lf~~-M~~~g~~Pd~~t~~~ll~a~~~~g~~~~a~~l~~~~~~~g~~-------~~~~~---- 426 (857)
T PLN03077 359 AMISGYEKNGLPDKALETYAL-MEQDNVSPDEITIASVLSACACLGDLDVGVKLHELAERKGLI-------SYVVV---- 426 (857)
T ss_pred HHHHHHHhCCCHHHHHHHHHH-HHHhCCCCCceeHHHHHHHHhccchHHHHHHHHHHHHHhCCC-------cchHH----
Confidence 999999999999999999999 67789999999995 3566777888888877754433322 44433
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhh
Q 026720 158 YGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQL 211 (234)
Q Consensus 158 ~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 211 (234)
|+.++++|+. .+..+.+.++++.|..++..+|+..+..
T Consensus 427 ~n~Li~~y~k----------------~g~~~~A~~vf~~m~~~d~vs~~~mi~~ 464 (857)
T PLN03077 427 ANALIEMYSK----------------CKCIDKALEVFHNIPEKDVISWTSIIAG 464 (857)
T ss_pred HHHHHHHHHH----------------cCCHHHHHHHHHhCCCCCeeeHHHHHHH
Confidence 6889999997 6788999999999999999999866544
No 4
>PLN03077 Protein ECB2; Provisional
Probab=99.93 E-value=9.2e-27 Score=210.47 Aligned_cols=183 Identities=25% Similarity=0.392 Sum_probs=159.1
Q ss_pred CccCCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHH
Q 026720 1 MKLANENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 80 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~ 80 (234)
|...|+.||.+||+++|++|++.+.++.|.++|.+|++.|+.||..++|+||.+|+++|++++|.++|++|+++|+++||
T Consensus 178 M~~~g~~Pd~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~n~Li~~y~k~g~~~~A~~lf~~m~~~d~~s~n 257 (857)
T PLN03077 178 MLWAGVRPDVYTFPCVLRTCGGIPDLARGREVHAHVVRFGFELDVDVVNALITMYVKCGDVVSARLVFDRMPRRDCISWN 257 (857)
T ss_pred HHHcCCCCChhHHHHHHHHhCCccchhhHHHHHHHHHHcCCCcccchHhHHHHHHhcCCCHHHHHHHHhcCCCCCcchhH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccCCCCCCCcccCcccccccccccccC
Q 026720 81 IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEI 157 (234)
Q Consensus 81 ~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~ 157 (234)
++|.+|+++|+.++|+.+|.+ |...|+.|+.+++. .++++.+++..+++++..+...+.. |+...
T Consensus 258 ~li~~~~~~g~~~eAl~lf~~-M~~~g~~Pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~g~~-------~d~~~---- 325 (857)
T PLN03077 258 AMISGYFENGECLEGLELFFT-MRELSVDPDLMTITSVISACELLGDERLGREMHGYVVKTGFA-------VDVSV---- 325 (857)
T ss_pred HHHHHHHhCCCHHHHHHHHHH-HHHcCCCCChhHHHHHHHHHHhcCChHHHHHHHHHHHHhCCc-------cchHH----
Confidence 999999999999999999999 67789999999995 3456777777788877755433322 66555
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhh
Q 026720 158 YGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQL 211 (234)
Q Consensus 158 ~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 211 (234)
|+.++++|+. .+.++.+.++++.|..|+..+|+..+..
T Consensus 326 ~n~Li~~y~k----------------~g~~~~A~~vf~~m~~~d~~s~n~li~~ 363 (857)
T PLN03077 326 CNSLIQMYLS----------------LGSWGEAEKVFSRMETKDAVSWTAMISG 363 (857)
T ss_pred HHHHHHHHHh----------------cCCHHHHHHHHhhCCCCCeeeHHHHHHH
Confidence 7888999987 5778888899999988888888854443
No 5
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=99.93 E-value=6.5e-27 Score=207.13 Aligned_cols=155 Identities=23% Similarity=0.371 Sum_probs=136.7
Q ss_pred CccCCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHH
Q 026720 1 MKLANENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWT 80 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~ 80 (234)
|...|+.||.+||+++|++|++.+.+++|+++|.+|++.|+.+|.+++|+||++|+++|++++|.++|++|.++|+++||
T Consensus 316 M~~~g~~pd~~t~~~ll~a~~~~g~~~~a~~i~~~m~~~g~~~d~~~~~~Li~~y~k~G~~~~A~~vf~~m~~~d~~t~n 395 (697)
T PLN03081 316 MRDSGVSIDQFTFSIMIRIFSRLALLEHAKQAHAGLIRTGFPLDIVANTALVDLYSKWGRMEDARNVFDRMPRKNLISWN 395 (697)
T ss_pred HHHcCCCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHhCCCCCeeehHHHHHHHHHCCCHHHHHHHHHhCCCCCeeeHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccCCCCCC-CcccCccccccccccccc
Q 026720 81 IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSNLPCT-DYVTTRWYRGPEVLLFSE 156 (234)
Q Consensus 81 ~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~pe~~~~~~ 156 (234)
+||.||+++|+.++|+.+|.+ |...|+.||.+++. .++++.+.+..+..++..|... +. .|+..
T Consensus 396 ~lI~~y~~~G~~~~A~~lf~~-M~~~g~~Pd~~T~~~ll~a~~~~g~~~~a~~~f~~m~~~~g~-------~p~~~---- 463 (697)
T PLN03081 396 ALIAGYGNHGRGTKAVEMFER-MIAEGVAPNHVTFLAVLSACRYSGLSEQGWEIFQSMSENHRI-------KPRAM---- 463 (697)
T ss_pred HHHHHHHHcCCHHHHHHHHHH-HHHhCCCCCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCC-------CCCcc----
Confidence 999999999999999999999 67889999999994 3466677777777777665321 21 25543
Q ss_pred CCCCcchHHHH
Q 026720 157 IYGPEVDKWAM 167 (234)
Q Consensus 157 ~~~~~~d~~s~ 167 (234)
+|++++|.++.
T Consensus 464 ~y~~li~~l~r 474 (697)
T PLN03081 464 HYACMIELLGR 474 (697)
T ss_pred chHhHHHHHHh
Confidence 38899999996
No 6
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.92 E-value=1.6e-24 Score=162.82 Aligned_cols=169 Identities=37% Similarity=0.670 Sum_probs=135.3
Q ss_pred HHHHHhhcCChHHHHHHHHhhcc---------------CccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEE
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMRE---------------KNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLL 114 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~---------------~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~ 114 (234)
||+.|...+.+.-+ |+.|+. .|+.+|..| +.|+. ++|...++|+|++|+|.+
T Consensus 66 LiD~F~~~~~l~lV---fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~---------y~H~~~IlHRDlKPnNLL 133 (318)
T KOG0659|consen 66 LIDVFPHKSNLSLV---FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLA---------YCHSKWILHRDLKPNNLL 133 (318)
T ss_pred hhhhccCCCceEEE---EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHH---------HHHhhhhhcccCCccceE
Confidence 67777766655433 333431 267899998 99999 999988999999999999
Q ss_pred e-eCCeeeEeeccccccccCCCCCCC-cccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 026720 115 V-SKGVIKIGDLGMVKEIDSNLPCTD-YVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYK 192 (234)
Q Consensus 115 ~-~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~ 192 (234)
+ .++..++.|||+++.+........ .+.++||+|||.+.|.+.|..-+|+||.||++.|++.|.+.|+|.++.+++..
T Consensus 134 is~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~ 213 (318)
T KOG0659|consen 134 ISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSK 213 (318)
T ss_pred EcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHH
Confidence 9 578999999999999876554333 37899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 193 ICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 193 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
||+..|.|.++.|++....-.....+ +++.++...+|+.
T Consensus 214 If~~LGTP~~~~WP~~~~lpdY~~~~--~~P~~~~~~lf~a 252 (318)
T KOG0659|consen 214 IFRALGTPTPDQWPEMTSLPDYVKIQ--QFPKPPLNNLFPA 252 (318)
T ss_pred HHHHcCCCCcccCccccccccHHHHh--cCCCCcccccccc
Confidence 99999999999999654443222222 3444444445554
No 7
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.90 E-value=5.1e-24 Score=166.57 Aligned_cols=174 Identities=33% Similarity=0.509 Sum_probs=142.9
Q ss_pred HHHHHHHHHHhhcCChHHHHHHH---HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee--CCe
Q 026720 46 AIGTALVEMYSKCGHVEKAFKVF---NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS--KGV 119 (234)
Q Consensus 46 ~~~~~li~~~~~~g~~~~a~~~~---~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~--~~~ 119 (234)
.+|..||.+|+-....+...+.. ..|+.-++.-|+.+ .+|++ ++|..++.|+|++|.|++++ ++.
T Consensus 94 ~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~---------yLh~~~IcHRDIKPqNlLvD~~tg~ 164 (364)
T KOG0658|consen 94 EVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLA---------YLHSHGICHRDIKPQNLLVDPDTGV 164 (364)
T ss_pred hhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHH---------HHHhcCcccCCCChheEEEcCCCCe
Confidence 57889999999876665555421 34666688889888 89999 99999999999999999994 689
Q ss_pred eeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 120 IKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 120 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
.+++|||.|+.+...-+...+++|++|+|||.+.+...|++.+|+||.||++.||+.|+++|+|.+..+++..|++..|.
T Consensus 165 LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~ 244 (364)
T KOG0658|consen 165 LKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGT 244 (364)
T ss_pred EEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCC
Confidence 99999999999988878888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
|..+.-..+--. ...-+.|+..+.++.++
T Consensus 245 Pt~e~I~~mn~~--y~~~~~p~ik~~~~~~~ 273 (364)
T KOG0658|consen 245 PTREDIKSMNPN--YTEFKFPQIKAHPWHKV 273 (364)
T ss_pred CCHHHHhhcCcc--cccccCcccccccceee
Confidence 886532211111 11334555555555443
No 8
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.89 E-value=4.1e-23 Score=159.87 Aligned_cols=168 Identities=37% Similarity=0.652 Sum_probs=138.6
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccC----ccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREK----NLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~----~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.||+.||.+ +...+.+.|+++ .+.+...+ ++|+. ++|...++|+|++|.|.++ ..+..+++
T Consensus 153 y~VMe~~Eh----DLksl~d~m~q~F~~~evK~L~~QlL~glk---------~lH~~wilHRDLK~SNLLm~~~G~lKia 219 (419)
T KOG0663|consen 153 YIVMEYVEH----DLKSLMETMKQPFLPGEVKTLMLQLLRGLK---------HLHDNWILHRDLKTSNLLLSHKGILKIA 219 (419)
T ss_pred eeeHHHHHh----hHHHHHHhccCCCchHHHHHHHHHHHHHHH---------HHhhceeEecccchhheeeccCCcEEec
Confidence 577888875 455677888864 45555555 88988 9999999999999999999 57899999
Q ss_pred eccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 124 DLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 124 ~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
|||+|++..... +....+.+-||++||++.+.+.|++.+|+||.||++.|+++++++|+|.+..+++.+||+.+|.|..
T Consensus 220 DFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte 299 (419)
T KOG0663|consen 220 DFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSE 299 (419)
T ss_pred ccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcc
Confidence 999999987753 3455678899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcchhhhhhhh-ccccCCCCCccccccC
Q 026720 203 DSWPLGIQLASNL-NWKLPQMGGVNLLAVM 231 (234)
Q Consensus 203 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 231 (234)
..|+ .+.++... ...+++.+...+..-|
T Consensus 300 ~iwp-g~~~lp~~k~~~f~~~pyn~lr~kF 328 (419)
T KOG0663|consen 300 AIWP-GYSELPAVKKMTFSEHPYNNLRKKF 328 (419)
T ss_pred ccCC-CccccchhhccccCCCCchhhhhhc
Confidence 9998 66666544 3455555555444433
No 9
>PLN03218 maturation of RBCL 1; Provisional
Probab=99.89 E-value=1.9e-24 Score=195.48 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=82.2
Q ss_pred CccCCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhc------cC
Q 026720 1 MKLANENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMR------EK 74 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~------~~ 74 (234)
|...|+.||.+||+++|++|++.|++++|.++|..|.+.|+.||.++||+||.+|++.|.+++|.++|++|. .|
T Consensus 498 M~~~Gv~PdvvTynaLI~gy~k~G~~eeAl~lf~~M~~~Gv~PD~vTYnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~P 577 (1060)
T PLN03218 498 MVNAGVEANVHTFGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDP 577 (1060)
T ss_pred HHHcCCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCCC
Confidence 344566666666666666666666666666666666666666666666666666666666666666666663 24
Q ss_pred ccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccCCCC
Q 026720 75 NLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSNLP 136 (234)
Q Consensus 75 ~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~~~~ 136 (234)
|.++||++|.+|++.|+.++|.++|.. |...++.|+..+++ .++++.+++..|..++..|.
T Consensus 578 D~vTynaLI~ay~k~G~ldeA~elf~~-M~e~gi~p~~~tynsLI~ay~k~G~~deAl~lf~eM~ 641 (1060)
T PLN03218 578 DHITVGALMKACANAGQVDRAKEVYQM-IHEYNIKGTPEVYTIAVNSCSQKGDWDFALSIYDDMK 641 (1060)
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHH-HHHcCCCCChHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 666666666666666666666666665 45556666555552 23445555555555554443
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.2e-22 Score=154.03 Aligned_cols=168 Identities=24% Similarity=0.398 Sum_probs=136.5
Q ss_pred HHHHHHhhcCChHHHHHHHHh----hccCccccHHHH-HHHHHhcCCchhhhHhhh--c--ccccCCcCCCcEEe-eCCe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTIM-ISGLADNSRGNDAISLHR--Q--GYFHRDLKPSNLLV-SKGV 119 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~--~--~~~~~~l~p~~~~~-~~~~ 119 (234)
.++.+||.+|++...++-|.. .+++.|--|-.+ .+|+. +.|. . .++|+|++|.|+.+ .++.
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~---------~cH~~~~r~~VmHRDIKPaNIFl~~~gv 166 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY---------HCHSKIPRGTVMHRDIKPANIFLTANGV 166 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH---------HHhccccccceeeccCcchheEEcCCCc
Confidence 488999999999999888865 445565555444 66766 5665 3 38899999999999 5789
Q ss_pred eeEeeccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC
Q 026720 120 IKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG 198 (234)
Q Consensus 120 ~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~ 198 (234)
++++|||+++.+..... ...++++|.|++||++...+ |+.++|+||+||+++||+.-.+||.|+.-.+.-.+|.+.--
T Consensus 167 vKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 167 VKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY 245 (375)
T ss_pred eeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC
Confidence 99999999998876432 34579999999999998544 99999999999999999999999999966666666766544
Q ss_pred CCCC-CCCcchhhhhhhhccccCCCCCccc
Q 026720 199 SPTK-DSWPLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
.|-+ +.|++.+++++++|...+..+||+.
T Consensus 246 ~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 246 PPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred CCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 4455 7899999999999999999999974
No 11
>PLN03218 maturation of RBCL 1; Provisional
Probab=99.87 E-value=8.3e-24 Score=191.28 Aligned_cols=138 Identities=16% Similarity=0.192 Sum_probs=124.8
Q ss_pred CccCCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhc----cCcc
Q 026720 1 MKLANENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMR----EKNL 76 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~----~~~~ 76 (234)
|...|+.||.+||+++|++|++.|++++|.++|.+|.+.|+.||..+||+||.+|+++|++++|.++|++|. .||+
T Consensus 640 M~~~Gv~PD~~TynsLI~a~~k~G~~eeA~~l~~eM~k~G~~pd~~tynsLI~ay~k~G~~eeA~~lf~eM~~~g~~Pdv 719 (1060)
T PLN03218 640 MKKKGVKPDEVFFSALVDVAGHAGDLDKAFEILQDARKQGIKLGTVSYSSLMGACSNAKNWKKALELYEDIKSIKLRPTV 719 (1060)
T ss_pred HHHcCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCH
Confidence 567899999999999999999999999999999999999999999999999999999999999999999996 4899
Q ss_pred ccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccCCCCCCC
Q 026720 77 QSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSNLPCTD 139 (234)
Q Consensus 77 ~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~ 139 (234)
++||++|.+|++.|+.++|+++|.+ |...|+.|+.++|. .++++.+++..+..++..|...+
T Consensus 720 vtyN~LI~gy~k~G~~eeAlelf~e-M~~~Gi~Pd~~Ty~sLL~a~~k~G~le~A~~l~~~M~k~G 784 (1060)
T PLN03218 720 STMNALITALCEGNQLPKALEVLSE-MKRLGLCPNTITYSILLVASERKDDADVGLDLLSQAKEDG 784 (1060)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHH-HHHcCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999 67789999999884 45667778888888887665444
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.87 E-value=3.9e-23 Score=158.16 Aligned_cols=143 Identities=33% Similarity=0.609 Sum_probs=119.0
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
||.+||...-+++..+.-..+++.-+..|..+ |.|.. ..|+.+++|+|++|.|+++ ..+..+++|||.|
T Consensus 78 LVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~---------~cHk~n~IHRDIKPENILit~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 78 LVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIH---------FCHKNNCIHRDIKPENILITQNGVVKLCDFGFA 148 (396)
T ss_pred EEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhh---------hhhhcCeecccCChhheEEecCCcEEeccchhh
Confidence 45566666666666555455555567788777 77777 7899999999999999999 4789999999999
Q ss_pred cccc-CCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 129 KEID-SNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 129 ~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+. ..-...+++.++||+|||.+.+...|..-+|+||.||++.||++|.+.|||.++.|+++.|....|...+
T Consensus 149 R~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p 223 (396)
T KOG0593|consen 149 RTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP 223 (396)
T ss_pred HhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH
Confidence 9887 3334667899999999999998778999999999999999999999999999999999999877775443
No 13
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-22 Score=158.08 Aligned_cols=143 Identities=38% Similarity=0.640 Sum_probs=123.2
Q ss_pred HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccccccccC---CCCCCCcccCcccccccccccccCC
Q 026720 83 ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDS---NLPCTDYVTTRWYRGPEVLLFSEIY 158 (234)
Q Consensus 83 i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~ 158 (234)
++|+- ++|+.+++|+|++|.|++++ +.-.+++|||+|+.... .-...+++.|+||.|||++.....|
T Consensus 135 LrgLK---------yiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Y 205 (359)
T KOG0660|consen 135 LRGLK---------YIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEY 205 (359)
T ss_pred HHhcc---------hhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccc
Confidence 66666 88999999999999999995 34469999999998853 2234568899999999999878889
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhh-hhhhhccccCCCCCccccccCCCC
Q 026720 159 GPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQ-LASNLNWKLPQMGGVNLLAVMPSA 234 (234)
Q Consensus 159 ~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (234)
+..+|+||.||++.||++|++.|+|.+..+++..|.+..|.|+.+.....-. .+..+....|+.++.+|.++||+|
T Consensus 206 t~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a 282 (359)
T KOG0660|consen 206 TKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNA 282 (359)
T ss_pred cchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCC
Confidence 9999999999999999999999999999999999999999998877653332 245677789999999999999975
No 14
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.85 E-value=8.3e-22 Score=154.53 Aligned_cols=174 Identities=22% Similarity=0.329 Sum_probs=143.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccc-cHHHHHHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQ-SWTIMISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~-~~~~~i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
-+++.+|+.+|+++.+.......+++-+- .-.++|+|+. ++|. ..++|||+||.|+++ ..+..+++||
T Consensus 153 isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~---------YLh~~~~IIHRDIKPsNlLvNskGeVKicDF 223 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLS---------YLHEERKIIHRDIKPSNLLVNSKGEVKICDF 223 (364)
T ss_pred EEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHH---------HHhhccCeeeccCCHHHeeeccCCCEEeccc
Confidence 46899999999999998876666665443 4456699999 9995 779999999999999 4788999999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHHhhCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGK-----SSADQIYKICQLIGSP 200 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~-----~~~~~~~~i~~~~~~~ 200 (234)
|..+.+..+ ...+++|+..|++||.+. +..|+...|+||+|..++|+..|+-||+.. +-.+.+..|+......
T Consensus 224 GVS~~lvnS-~a~tfvGT~~YMsPERi~-g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~ 301 (364)
T KOG0581|consen 224 GVSGILVNS-IANTFVGTSAYMSPERIS-GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPR 301 (364)
T ss_pred cccHHhhhh-hcccccccccccChhhhc-CCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCC
Confidence 999999887 567889999999999998 456999999999999999999999999874 3344444455543333
Q ss_pred CCC-CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TKD-SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
-+. .|+..++.+...|..-++..|++..+++.+
T Consensus 302 lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 302 LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 334 499999999999999999999999998765
No 15
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.85 E-value=3.6e-21 Score=150.44 Aligned_cols=149 Identities=39% Similarity=0.730 Sum_probs=122.3
Q ss_pred CccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC-CCCcccCccccccc
Q 026720 74 KNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPE 150 (234)
Q Consensus 74 ~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe 150 (234)
+.+.+|..+ +.|+. ++|+.+++|+|++|.|+++ .++..++.|||.|+.....+. ....+.+-+|.+||
T Consensus 120 ~~ik~~m~Qll~gl~---------~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPE 190 (323)
T KOG0594|consen 120 RLIKSFMRQLLRGLA---------FLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPE 190 (323)
T ss_pred HHHHHHHHHHHHHHH---------HHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHH
Confidence 457777777 88999 9999999999999999999 467889999999997664443 44567788999999
Q ss_pred ccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCC-Cccccc
Q 026720 151 VLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMG-GVNLLA 229 (234)
Q Consensus 151 ~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 229 (234)
++.+...|+.-+|+||+||++.||+++++.|+|....+++.+||+.+|.|+...|+... .+.+..-..++++ +.++..
T Consensus 191 vLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~-~~~~~k~~f~~~~~~~~l~~ 269 (323)
T KOG0594|consen 191 VLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVS-SLPDYKAPFPKWPGPKDLSS 269 (323)
T ss_pred HhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCcc-ccccccccCcCCCCccchHH
Confidence 99988889999999999999999999999999999999999999999999999998433 3333333455555 444444
Q ss_pred cCC
Q 026720 230 VMP 232 (234)
Q Consensus 230 ~~~ 232 (234)
.+|
T Consensus 270 ~~~ 272 (323)
T KOG0594|consen 270 ILP 272 (323)
T ss_pred hcc
Confidence 443
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.7e-21 Score=158.07 Aligned_cols=148 Identities=35% Similarity=0.602 Sum_probs=125.0
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
+||.+|+.+....-+..---.+.++++..|-.+ +.|+. ++|..+++|+|++..|+++ +.+..++.|||+
T Consensus 194 YlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~---------~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 194 YLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLE---------YCHSRGVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHH---------HHhhcCeeeccccccceEEcCCCCEEeccccc
Confidence 577778777655444332223445677777766 88998 9999999999999999999 578999999999
Q ss_pred cccccCC--CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 128 VKEIDSN--LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 128 a~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
|+..... ......+.+.||++||++.|...|+..+|+||.||++.||+.|+++|+|....+++.+||+..|.|....|
T Consensus 265 Ar~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W 344 (560)
T KOG0600|consen 265 ARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYW 344 (560)
T ss_pred eeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcc
Confidence 9955432 24455678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred c
Q 026720 206 P 206 (234)
Q Consensus 206 ~ 206 (234)
+
T Consensus 345 ~ 345 (560)
T KOG0600|consen 345 P 345 (560)
T ss_pred c
Confidence 8
No 17
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.83 E-value=6.1e-21 Score=154.93 Aligned_cols=178 Identities=24% Similarity=0.334 Sum_probs=138.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcc-cccCCcCCCcEEee-CC-eeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQG-YFHRDLKPSNLLVS-KG-VIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~-~~~~~l~p~~~~~~-~~-~~~~~~~ 125 (234)
.++|.+|+..|.+.+...-- .+....+-..+....+..++.+ ++|... ++|+|++|+|+++. .. .++++||
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~----~~~~l~~~~~l~~aldiArGm~--YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKK----RKRKLPLKVRLRIALDIARGME--YLHSEGPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhc----ccCCCCHHHHHHHHHHHHHHHH--HHhcCCCeeecccChhhEEEcCCCCEEEECCC
Confidence 47999999999999876542 2223333333333333333333 888888 89999999999994 54 8999999
Q ss_pred cccccccCC-CCCCCcccCccccccccccc-ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC-C
Q 026720 126 GMVKEIDSN-LPCTDYVTTRWYRGPEVLLF-SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT-K 202 (234)
Q Consensus 126 ~~a~~~~~~-~~~~~~~~~~~~~~pe~~~~-~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~-~ 202 (234)
|.++..... .......++..|+|||++.. ...|+.++|+||+|+++||+++|+.||.+......+..+...-.+|+ +
T Consensus 189 Glsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p 268 (362)
T KOG0192|consen 189 GLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP 268 (362)
T ss_pred ccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC
Confidence 999887754 33344678899999999974 34599999999999999999999999999998667766766656665 4
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..++..||..++..||+|.+|++
T Consensus 269 ~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 269 KECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 558889999999999999999999999875
No 18
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.81 E-value=1.8e-21 Score=160.27 Aligned_cols=174 Identities=25% Similarity=0.440 Sum_probs=143.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHHHH-HHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS-GLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~-~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
++|++||..|.+-+..+--+.|...-.+.|..-|. |+- |||...++|+|++.-|+++. .-..+++|||.
T Consensus 188 CIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~---------YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGT 258 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMN---------YLHLHKIIHRDLKSPNILISYDDVVKISDFGT 258 (904)
T ss_pred EEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhH---------HHHHhhHhhhccCCCceEeeccceEEeccccc
Confidence 68999999999998876544454445677877644 333 67766789999999999994 56889999999
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HHhhCCCCCCCCc
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKI-CQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i-~~~~~~~~~~~~~ 206 (234)
.+++........+.++..|+|||++. +...+.++|+||+|++||||++|+.||.+.+...+.+.+ .+.+.-|-+.+++
T Consensus 259 S~e~~~~STkMSFaGTVaWMAPEvIr-nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP 337 (904)
T KOG4721|consen 259 SKELSDKSTKMSFAGTVAWMAPEVIR-NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCP 337 (904)
T ss_pred hHhhhhhhhhhhhhhhHhhhCHHHhh-cCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCc
Confidence 99887655566788999999999997 555799999999999999999999999988777665554 2455668889999
Q ss_pred chhhhhhhhccccCCCCCccccccCCC
Q 026720 207 LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++..|++.||+-.+..||+|..|+.+
T Consensus 338 ~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 338 DGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 999999999999999999999988653
No 19
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.80 E-value=4.1e-20 Score=146.61 Aligned_cols=137 Identities=26% Similarity=0.451 Sum_probs=117.2
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHH-HHHhcCCchhhhHhhhcccccCCcCCCcEEeeC-------Ce
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS-GLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK-------GV 119 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~-~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~-------~~ 119 (234)
+-.||.+||..|++..-++.....++..+..|..+|. |+. .+|+..++|+|+||.|+++.. ..
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq---------~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQ---------FLHENNIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeeccCCcceEEeccCCCCCCCce
Confidence 5579999999999999888777777667777777744 455 678888999999999999942 56
Q ss_pred eeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 026720 120 IKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKIC 194 (234)
Q Consensus 120 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~ 194 (234)
.++.|||.|+.+.......+.+|++.|+|||++. ..+|+.+.|+||.|+++|++++|+.||+.....+.+..+-
T Consensus 154 LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~-~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~ 227 (429)
T KOG0595|consen 154 LKIADFGFARFLQPGSMAETLCGSPLYMAPEVIM-SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIK 227 (429)
T ss_pred EEecccchhhhCCchhHHHHhhCCccccCHHHHH-hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh
Confidence 7999999999998877777889999999999997 5679999999999999999999999999888888776553
No 20
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.80 E-value=4.9e-20 Score=150.58 Aligned_cols=173 Identities=20% Similarity=0.337 Sum_probs=137.3
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.||.+|+..|++.+-.+--+. ...+....|.++ -.|++ +|.+...+|||+...|++. ...+++++||
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~---------YLes~~~IHRDLAARNiLV~~~~~vKIsDF 347 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMA---------YLESKNYIHRDLAARNILVDEDLVVKISDF 347 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHH---------HHHhCCccchhhhhhheeeccCceEEEccc
Confidence 689999999999887654111 111234455555 33444 7888889999999999999 5678999999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
|+|+.+...-. ..+-.-...|.|||.+..+ .|+.++|+||+|++|||+++ |+.|+++....+.+..+-+...-|.+
T Consensus 348 GLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~-~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P 426 (468)
T KOG0197|consen 348 GLARLIGDDEYTASEGGKFPIKWTAPEALNYG-KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP 426 (468)
T ss_pred ccccccCCCceeecCCCCCCceecCHHHHhhC-CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC
Confidence 99995543221 1222223468999999854 48999999999999999997 77999999999999999999999999
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..++..+-.+++.||+..+.+||||+.+++
T Consensus 427 ~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 427 EGCPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred CCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 999999999999999999999999997654
No 21
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.79 E-value=2.7e-19 Score=138.03 Aligned_cols=137 Identities=37% Similarity=0.598 Sum_probs=125.5
Q ss_pred hHhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 96 ISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 96 ~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
.++|+.+++|+|++|.++.+. ....++.+||.+......+....++.++.|.|||++.+.. |...+|+||.||++.||
T Consensus 132 k~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEl 210 (369)
T KOG0665|consen 132 KHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEL 210 (369)
T ss_pred HHHHhcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccC-CcccchhhhhhhHHHHH
Confidence 389999999999999999994 5677999999999877666677889999999999999777 89999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.|+..|+|....++..++.+..|.|++........-...+....|+.+..+|+++||+
T Consensus 211 i~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD 269 (369)
T KOG0665|consen 211 ILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPD 269 (369)
T ss_pred hhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCc
Confidence 99999999999999999999999999999988777777888889999999999999986
No 22
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.78 E-value=2.2e-19 Score=128.47 Aligned_cols=169 Identities=31% Similarity=0.631 Sum_probs=127.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhcc----CccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMRE----KNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~----~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~ 123 (234)
+||..||. ++..+.|+.+.. .-+.++-.+ ++|++ ..|+..+.|++++|.+.+++ ++..++.
T Consensus 77 tlvfe~cd----qdlkkyfdslng~~d~~~~rsfmlqllrgl~---------fchshnvlhrdlkpqnllin~ngelkla 143 (292)
T KOG0662|consen 77 TLVFEFCD----QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLG---------FCHSHNVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_pred EEeHHHhh----HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhh---------hhhhhhhhhccCCcceEEeccCCcEEec
Confidence 56777765 344566666542 123344444 88887 77888899999999999994 6788999
Q ss_pred eccccccccCCCCC-CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 124 DLGMVKEIDSNLPC-TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 124 ~~~~a~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
+||+++.+.....+ ...+.+-+|.+|+++.+...|++.+|+||.||++.|+.. |+++|||.+..+++.+||...|.|.
T Consensus 144 dfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ 223 (292)
T KOG0662|consen 144 DFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223 (292)
T ss_pred ccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCc
Confidence 99999987764432 345678899999999988899999999999999999995 7799999999999999999999999
Q ss_pred CCCCcchhhhhhhhccccCCC-CCccccccCCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQM-GGVNLLAVMPS 233 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 233 (234)
.+.|+...+ +..+.- .|-+ ...+|..|+|+
T Consensus 224 ed~wps~t~-lpdyk~-yp~ypattswsqivp~ 254 (292)
T KOG0662|consen 224 EDQWPSMTK-LPDYKP-YPIYPATTSWSQIVPK 254 (292)
T ss_pred cccCCcccc-CCCCcc-cCCccccchHHHHhhh
Confidence 999995433 332221 1222 23455555554
No 23
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=2.2e-20 Score=148.26 Aligned_cols=177 Identities=23% Similarity=0.253 Sum_probs=132.5
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C---CeeeE
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K---GVIKI 122 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~---~~~~~ 122 (234)
+.+||.+|...|++-+-.---..+.+..-..|-.+ +.|.- ++|+.++.|||++|+|+++. + .+.++
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avk---------YLH~~GI~HRDiKPeNILl~~~~e~~llKI 320 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVK---------YLHSQGIIHRDIKPENILLSNDAEDCLLKI 320 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHH---------HHHHcCcccccCCcceEEeccCCcceEEEe
Confidence 34888999999987664322222222223333333 77777 99999999999999999994 3 57899
Q ss_pred eeccccccccCCCCCCCcccCccccccccccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhhCC
Q 026720 123 GDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSE--IYGPEVDKWAMGAIMFEMLSFGILFPGKSSAD-QIYKICQLIGS 199 (234)
Q Consensus 123 ~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~-~~~~i~~~~~~ 199 (234)
.|||+|+..+.....++.+|++.|.|||++.+.. .|+.++|+||+||+++-+++|.+||++..... ...+|.+.--.
T Consensus 321 tDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~ 400 (475)
T KOG0615|consen 321 TDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYA 400 (475)
T ss_pred cccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCccc
Confidence 9999999988666677889999999999986533 46679999999999999999999999865444 55566665445
Q ss_pred CCCCCCcchhhhhh---hhccccCCCCCccccccCCC
Q 026720 200 PTKDSWPLGIQLAS---NLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..|.+.-++.. +.....++..|++..+.+++
T Consensus 401 f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 401 FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 55667766555544 44556789999999988764
No 24
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.77 E-value=2.5e-19 Score=145.76 Aligned_cols=174 Identities=22% Similarity=0.391 Sum_probs=151.9
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++.+||..|++.+++.--. ..+++-+.-|-.+ +.|.. ++|...++|+++++.|+.+ .+..++++|
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~---------ylH~~~iLHRDlK~~Nifltk~~~VkLgD 149 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVN---------YLHENRVLHRDLKCANIFLTKDKKVKLGD 149 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHH---------HHHhhhhhcccchhhhhhccccCceeecc
Confidence 568899999999999876544 2445677888777 67777 8998889999999999998 455669999
Q ss_pred ccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 125 LGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 125 ~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
||.++.+.... ....+++++.|++||++.+. .|+.+.|+||+||+++||+.-++.|.+.+......+|++....|.+.
T Consensus 150 fGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~-pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~ 228 (426)
T KOG0589|consen 150 FGLAKILNPEDSLASTVVGTPYYMCPEILSDI-PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPS 228 (426)
T ss_pred hhhhhhcCCchhhhheecCCCcccCHHHhCCC-CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCc
Confidence 99999988765 55678999999999999854 49999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.|...+..+..-+....+..||+..+++.
T Consensus 229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~ 257 (426)
T KOG0589|consen 229 MYSSELRSLVKSMLRKNPEHRPSALELLR 257 (426)
T ss_pred cccHHHHHHHHHHhhcCCccCCCHHHHhh
Confidence 99999999998888888899999988875
No 25
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.77 E-value=6.1e-19 Score=138.44 Aligned_cols=156 Identities=26% Similarity=0.298 Sum_probs=118.4
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.||..|...|.+---.+--...++..+..|.+= +.|+. +||+.++++||++|+|+++ ..+.+++.|||+
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~---------~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL 171 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALG---------YLHSKGIIYRDLKPENILLDEQGHIKLTDFGL 171 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHH---------HHHhCCeeeccCCHHHeeecCCCcEEEecccc
Confidence 456667777776554433233344445667665 77777 9999999999999999999 578999999999
Q ss_pred cccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
++.... .....+.+||+-|+|||++... .|+..+|.||+|+++|||++|.+||.+........+|.+.-....+..++
T Consensus 172 ~k~~~~~~~~t~tfcGT~eYmAPEil~~~-gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls 250 (357)
T KOG0598|consen 172 CKEDLKDGDATRTFCGTPEYMAPEILLGK-GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLS 250 (357)
T ss_pred chhcccCCCccccccCCccccChHHHhcC-CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCC
Confidence 996544 3456678999999999999854 58999999999999999999999999998888877777655444444455
Q ss_pred chhhhhhhh
Q 026720 207 LGIQLASNL 215 (234)
Q Consensus 207 ~~~~~~~~~ 215 (234)
..-..+.+.
T Consensus 251 ~~ardll~~ 259 (357)
T KOG0598|consen 251 EEARDLLKK 259 (357)
T ss_pred HHHHHHHHH
Confidence 444444333
No 26
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=3.4e-19 Score=147.65 Aligned_cols=175 Identities=23% Similarity=0.281 Sum_probs=139.2
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEee
Q 026720 47 IGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGD 124 (234)
Q Consensus 47 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~ 124 (234)
.+.+|+-++|..|++.+..+.-..+.++-+..|..+ +.|+- ++|+..++|||++..|+.++ ....+++|
T Consensus 91 ~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~Glk---------YLH~~~IiHRDLKLGNlfL~~~~~VKIgD 161 (592)
T KOG0575|consen 91 NNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLK---------YLHSLGIIHRDLKLGNLFLNENMNVKIGD 161 (592)
T ss_pred CceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHH---------HHHhcCceecccchhheeecCcCcEEecc
Confidence 345788899999999988775555667788888888 78888 99999999999999999995 45789999
Q ss_pred ccccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-hhCCCCC
Q 026720 125 LGMVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ-LIGSPTK 202 (234)
Q Consensus 125 ~~~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~-~~~~~~~ 202 (234)
||+|..+... -...+.+|||.|.|||++. ...++.-+|+||+||++|.++.|+|||....-.+...+|-. ....|.
T Consensus 162 FGLAt~le~~~Erk~TlCGTPNYIAPEVl~-k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~- 239 (592)
T KOG0575|consen 162 FGLATQLEYDGERKKTLCGTPNYIAPEVLN-KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS- 239 (592)
T ss_pred cceeeeecCcccccceecCCCcccChhHhc-cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc-
Confidence 9999998743 3567889999999999998 44478999999999999999999999998877777777644 333343
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+-+..-..|+.-.....+-.||++++++.+
T Consensus 240 -~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 240 -HLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -ccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 323333444555556677899999998764
No 27
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.77 E-value=7.9e-19 Score=143.81 Aligned_cols=170 Identities=26% Similarity=0.338 Sum_probs=135.6
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
+.+.+|++.|++-+-++-+....+-...-|++. |.++- ++|+.+++|||++|+|+++ .++..++.|||.
T Consensus 150 YFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAle---------ylH~~GIIHRDlKPENILLd~dmhikITDFGs 220 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALE---------YLHSNGIIHRDLKPENILLDKDGHIKITDFGS 220 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHH---------HHHhcCceeccCChhheeEcCCCcEEEeeccc
Confidence 356678999998888777776666666778887 88888 9999999999999999999 578999999999
Q ss_pred cccccCCC--------------CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 026720 128 VKEIDSNL--------------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKI 193 (234)
Q Consensus 128 a~~~~~~~--------------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i 193 (234)
|+.+.... ....++|+-.|.+||++.+.. .+...|+|++||++|+|+.|.+||.+...+..+++|
T Consensus 221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI 299 (604)
T KOG0592|consen 221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI 299 (604)
T ss_pred cccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 98763321 113467888899999998654 478899999999999999999999999999999999
Q ss_pred HHhhCCCCCCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 194 CQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
....-..++.. ++....|.+.....++.+|++.++|
T Consensus 300 ~~l~y~fp~~f-p~~a~dLv~KLLv~dp~~Rlt~~qI 335 (604)
T KOG0592|consen 300 QALDYEFPEGF-PEDARDLIKKLLVRDPSDRLTSQQI 335 (604)
T ss_pred HHhcccCCCCC-CHHHHHHHHHHHccCccccccHHHH
Confidence 88655544443 3556666666666777788777665
No 28
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.77 E-value=1.7e-19 Score=142.75 Aligned_cols=177 Identities=23% Similarity=0.309 Sum_probs=138.8
Q ss_pred HHHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeC--CeeeEe
Q 026720 48 GTALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK--GVIKIG 123 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~--~~~~~~ 123 (234)
.-+++.+|+..|++.+-..-+. .++++.+..|+.+ +.|+. ++|+++++|+|++|+|+++.. ..+++.
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~---------ylHs~g~vH~DiK~~NiLl~~~~~~~Kla 160 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLA---------YLHSKGIVHCDIKPANILLDPSNGDVKLA 160 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEeccCcccceEEEeCCCCeEEec
Confidence 3457789999999999988877 6888999999999 99999 999999999999999999943 689999
Q ss_pred eccccccccC--C--CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHhhC
Q 026720 124 DLGMVKEIDS--N--LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPG-KSSADQIYKICQLIG 198 (234)
Q Consensus 124 ~~~~a~~~~~--~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~-~~~~~~~~~i~~~~~ 198 (234)
|||.+..... . .......+++.|++||++..+......+|+||+||++.||++|++|+.+ ....+...++-..-.
T Consensus 161 DFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~ 240 (313)
T KOG0198|consen 161 DFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDS 240 (313)
T ss_pred cCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCC
Confidence 9998887663 1 1223467899999999997422122389999999999999999999998 344444444432222
Q ss_pred C-CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 S-PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. +-+.+-+...+.+...|-...+..|+|+++++.+
T Consensus 241 ~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 241 LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 2 2344555667777888999999999999998864
No 29
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-18 Score=143.31 Aligned_cols=171 Identities=23% Similarity=0.411 Sum_probs=132.2
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
.|++|...|.+.+...-+. |.+..+.+.. ..+.|+. +||..+++|+|++.|++++ .++..++.|||.+
T Consensus 347 VVMEym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~---------fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFc 416 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLK---------FLHARGIIHRDIKSDNILLTMDGSVKLTDFGFC 416 (550)
T ss_pred EEEeecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHH---------HHHhcceeeeccccceeEeccCCcEEEeeeeee
Confidence 3455666666665544322 3333332222 2256666 8999999999999999999 5788999999999
Q ss_pred ccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC---CC
Q 026720 129 KEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK---DS 204 (234)
Q Consensus 129 ~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~---~~ 204 (234)
.++.... ...+.+|++.|+|||++. ...|..++|+||+|+.++||+.|++||-.....-.++.|... |.|.. +.
T Consensus 417 aqi~~~~~KR~TmVGTPYWMAPEVvt-rk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n-g~P~lk~~~k 494 (550)
T KOG0578|consen 417 AQISEEQSKRSTMVGTPYWMAPEVVT-RKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPKLKNPEK 494 (550)
T ss_pred eccccccCccccccCCCCccchhhhh-hcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc-CCCCcCCccc
Confidence 9998876 455789999999999997 456999999999999999999999999987777666666553 44443 45
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
-+..++.+.+.|...+..+|.+..|+|.+
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 55678888888999999999999999864
No 30
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=1.9e-18 Score=144.55 Aligned_cols=174 Identities=21% Similarity=0.237 Sum_probs=134.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
+|+-+|...|.+-+..-.-..++++...-|-.+ |.|.. +.|...+.|+|++|.|.++. ..-.++.|||.
T Consensus 88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~---------yCH~~~icHRDLKpENlLLd~~~nIKIADFGM 158 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVS---------YCHAFNICHRDLKPENLLLDVKNNIKIADFGM 158 (786)
T ss_pred EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHH---------HHhhhcceeccCCchhhhhhcccCEeeeccce
Confidence 456667777766555444444555555544444 88888 88888899999999999993 34489999999
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcc
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPL 207 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 207 (234)
|..-.......+.+|++.|.+||++.+.+......|+||+|++|+.+++|+.||+|+.-...+.++.+..=..+ ..-+.
T Consensus 159 AsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP-s~Is~ 237 (786)
T KOG0588|consen 159 ASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP-SNISS 237 (786)
T ss_pred eecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC-CcCCH
Confidence 87655555567789999999999999888778999999999999999999999998888888888876433322 23334
Q ss_pred hhhhhhhhccccCCCCCccccccCCC
Q 026720 208 GIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.-|.|.......++-.|++.++|+++
T Consensus 238 eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 238 EAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HHHHHHHHHhccCccccccHHHHhhC
Confidence 55667777778899999999999875
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.74 E-value=4.7e-18 Score=130.00 Aligned_cols=153 Identities=25% Similarity=0.297 Sum_probs=128.5
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
+-.||..|...|.+-.-.+--.+.+++....|.+. +.|+- ++|+..++.||++|.|+++ ..++.++.||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAle---------ylH~~~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALE---------YLHSLDIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHH---------HHHhcCeeeccCChHHeeeccCCcEEEEec
Confidence 34577888888888887777777888888899988 77787 8999999999999999999 5799999999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
|-|+.+..+ ..+.+++|-|+|||++.. ..|+..+|.||+|++++||+.|.+||.+......-.+|++.-...+...-
T Consensus 189 GFAK~v~~r--T~TlCGTPeYLAPEii~s-k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs 265 (355)
T KOG0616|consen 189 GFAKRVSGR--TWTLCGTPEYLAPEIIQS-KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFS 265 (355)
T ss_pred cceEEecCc--EEEecCCccccChHHhhc-CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccC
Confidence 999998875 566899999999999984 45899999999999999999999999999998888888876555555444
Q ss_pred cchhhhh
Q 026720 206 PLGIQLA 212 (234)
Q Consensus 206 ~~~~~~~ 212 (234)
+..-+++
T Consensus 266 ~~~kdLl 272 (355)
T KOG0616|consen 266 SDAKDLL 272 (355)
T ss_pred HHHHHHH
Confidence 4444433
No 32
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.74 E-value=2.2e-18 Score=143.98 Aligned_cols=116 Identities=33% Similarity=0.622 Sum_probs=100.9
Q ss_pred ccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccCCCCCCCcccCccccccc
Q 026720 75 NLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPE 150 (234)
Q Consensus 75 ~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe 150 (234)
.+.+++.+ +.++. .|+..+++|+|+||.||++. ..-.++.|||.+-...... ..++-+++|+|||
T Consensus 290 ~ir~~~~Qil~~L~---------~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v--ytYiQSRfYRAPE 358 (586)
T KOG0667|consen 290 LVRKFAQQILTALL---------FLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV--YTYIQSRFYRAPE 358 (586)
T ss_pred HHHHHHHHHHHHHH---------HHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcc--eeeeeccccccch
Confidence 44556655 77777 88888999999999999994 3457999999988876643 3788999999999
Q ss_pred ccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 151 VLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 151 ~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
++.+.+ |+..+||||+||++.||.+|.++|||....|++..|.+..|.|+.
T Consensus 359 VILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~ 409 (586)
T KOG0667|consen 359 VILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP 409 (586)
T ss_pred hhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence 999665 899999999999999999999999999999999999999998886
No 33
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=5.2e-18 Score=140.62 Aligned_cols=172 Identities=22% Similarity=0.353 Sum_probs=142.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHh-hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..||+.||- |+-.+..+|... |.+-.+...+.- +.|++ ++|+..++|+|++..|+++ ..+.++++||
T Consensus 101 aWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLa---------YLHS~~~IHRDiKAGNILLse~g~VKLaDF 170 (948)
T KOG0577|consen 101 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLA---------YLHSHNRIHRDIKAGNILLSEPGLVKLADF 170 (948)
T ss_pred HHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHH---------HHHHhhHHhhhccccceEecCCCeeeeccc
Confidence 458889996 777777777654 433334444444 78888 9999999999999999999 4789999999
Q ss_pred cccccccCCCCCCCcccCcccccccccccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh-CCCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFS--EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI-GSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~-~~~~~ 202 (234)
|.|..... -+.++|+|+|+|||++..+ ..|..++|+||+|+.+.|+..+++|+-++.....++.|.+.- ..-..
T Consensus 171 GSAsi~~P---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs 247 (948)
T KOG0577|consen 171 GSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS 247 (948)
T ss_pred cchhhcCc---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC
Confidence 98877553 5778999999999998543 369999999999999999999999999999999999998643 33446
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..|++.+..+.+.|..-++-+|++-+++|.+
T Consensus 248 ~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 248 NEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred chhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 7999999999999999999999999988764
No 34
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=9.6e-18 Score=137.31 Aligned_cols=175 Identities=22% Similarity=0.330 Sum_probs=132.5
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCcccc-HHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C-CeeeEee
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQS-WTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K-GVIKIGD 124 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~-~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~-~~~~~~~ 124 (234)
...+|.+||..|++-+...--..+.+..... +-.+++|.. ++|..++.|||++|.|+++. . ...++.|
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~---------y~H~~gi~HRDLK~ENilld~~~~~~Kl~D 164 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVA---------YCHSRGIVHRDLKPENILLDGNEGNLKLSD 164 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHH---------HHHhCCEeeCCCCHHHEEecCCCCCEEEec
Confidence 3678888999888877755544455544433 444588988 99999999999999999994 4 6889999
Q ss_pred ccccccc-cCCCCCCCcccCcccccccccccccCC-CCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh-hCCCC
Q 026720 125 LGMVKEI-DSNLPCTDYVTTRWYRGPEVLLFSEIY-GPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL-IGSPT 201 (234)
Q Consensus 125 ~~~a~~~-~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~-~~~~~ 201 (234)
||.+... .......+.+|++.|.|||++.+...| ...+|+||+|++++.|+.|..||.+........++... ...|.
T Consensus 165 FG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~ 244 (370)
T KOG0583|consen 165 FGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS 244 (370)
T ss_pred cccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC
Confidence 9999987 344456778999999999999876624 69999999999999999999999997666666665442 22233
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
... +.....+.......++.+|+++.+|+.
T Consensus 245 ~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 245 YLL-SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred CcC-CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 331 445566666666667777999999874
No 35
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=4.5e-18 Score=136.20 Aligned_cols=174 Identities=18% Similarity=0.276 Sum_probs=137.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCcccc-HHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQS-WTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~-~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+++.||..|.+.+..+.-.-+.+.-+.. ---++.|+. ++|.+..+|+++++.++++ ..+.+++.|||.
T Consensus 87 wiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~---------ylH~~~kiHrDIKaanil~s~~g~vkl~DfgV 157 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLD---------YLHSEKKIHRDIKAANILLSESGDVKLADFGV 157 (467)
T ss_pred HHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhh---------hhhhcceecccccccceeEeccCcEEEEecce
Confidence 47888999999888766533333332222 223366776 8898889999999999999 467899999999
Q ss_pred cccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+.++..... ..+++++++|+|||++. ...|+.+.|+||+|+..+||++|.+|+.+....-.+.-|-+.-...-...|+
T Consensus 158 a~ql~~~~~rr~tfvGTPfwMAPEVI~-~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S 236 (467)
T KOG0201|consen 158 AGQLTNTVKRRKTFVGTPFWMAPEVIK-QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFS 236 (467)
T ss_pred eeeeechhhccccccccccccchhhhc-cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccC
Confidence 998866543 37889999999999998 5569999999999999999999999999987755554444433322336899
Q ss_pred chhhhhhhhccccCCCCCccccccCCC
Q 026720 207 LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..++++...|....+..|++..+++.+
T Consensus 237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 237 PPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 999999999999999999999988754
No 36
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.72 E-value=1.1e-17 Score=125.10 Aligned_cols=149 Identities=23% Similarity=0.310 Sum_probs=121.0
Q ss_pred ccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee----CCeeeEeeccccccccCCCCCCCcccCcccccc
Q 026720 75 NLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGP 149 (234)
Q Consensus 75 ~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~p 149 (234)
++.-|..+ +.++. +.|..+++|++++|.+.++. .+-.++++||.|.++.......+.+++|+|++|
T Consensus 111 ~aSH~~rQiLeal~---------yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaP 181 (355)
T KOG0033|consen 111 DASHCIQQILEALA---------YCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSP 181 (355)
T ss_pred HHHHHHHHHHHHHH---------HHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCH
Confidence 33445554 56666 78999999999999999983 356799999999999877777889999999999
Q ss_pred cccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhh---hhhccccCCCCCcc
Q 026720 150 EVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLA---SNLNWKLPQMGGVN 226 (234)
Q Consensus 150 e~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 226 (234)
|++. ...|+.-+|+|++|++++-++.|.+||.|.+......+|.+.-...+...|+....+. .+.....++.+|+|
T Consensus 182 Evvr-kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt 260 (355)
T KOG0033|consen 182 EVLK-KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT 260 (355)
T ss_pred HHhh-cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc
Confidence 9997 4458999999999999999999999999988888888888866666666676555554 44456778889999
Q ss_pred ccccCCC
Q 026720 227 LLAVMPS 233 (234)
Q Consensus 227 ~~~~~~~ 233 (234)
..|-+++
T Consensus 261 a~EAL~H 267 (355)
T KOG0033|consen 261 ADEALKH 267 (355)
T ss_pred HHHHhCC
Confidence 8877654
No 37
>PHA02988 hypothetical protein; Provisional
Probab=99.72 E-value=1.5e-17 Score=132.46 Aligned_cols=174 Identities=18% Similarity=0.134 Sum_probs=126.7
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEee
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
+..++.+|+..|++.+...--..++......+... +.|+. ++|. .++.|++++|.++++ .+...++.+
T Consensus 96 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~---------~lH~~~~~~Hrdlkp~nill~~~~~~kl~d 166 (283)
T PHA02988 96 RLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLY---------NLYKYTNKPYKNLTSVSFLVTENYKLKIIC 166 (283)
T ss_pred ceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHH---------HHHhcCCCCCCcCChhhEEECCCCcEEEcc
Confidence 34688899999999887542111221222222222 34444 6775 367899999999999 467789999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC-
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK- 202 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~- 202 (234)
||.++.+... .....++..|+|||++.+. ..|+..+|+||+|+++||+++|+.||.+....+....+......+..
T Consensus 167 fg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 244 (283)
T PHA02988 167 HGLEKILSSP--PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP 244 (283)
T ss_pred cchHhhhccc--cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC
Confidence 9988765432 1234567789999998642 45889999999999999999999999988766666555544434333
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..++..||..++.+||++.+++.
T Consensus 245 ~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 245 LDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 367788999999999999999999999875
No 38
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.70 E-value=1.1e-16 Score=135.05 Aligned_cols=142 Identities=32% Similarity=0.533 Sum_probs=114.1
Q ss_pred HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C-CeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCC
Q 026720 83 ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K-GVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGP 160 (234)
Q Consensus 83 i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~ 160 (234)
+.|+. ++|+.+++|+|++|.|+++. . ...+++|||.++.+..........+++.|+|||++.+...|+.
T Consensus 180 ~~gL~---------yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 250 (440)
T PTZ00036 180 CRALA---------YIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTT 250 (440)
T ss_pred HHHHH---------HHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCc
Confidence 66777 89999999999999999994 3 3689999999987755444445677899999999876666899
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCC----------------------------CCcchhhhh
Q 026720 161 EVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKD----------------------------SWPLGIQLA 212 (234)
Q Consensus 161 ~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~----------------------------~~~~~~~~~ 212 (234)
.+|+||+||+++||++|.+||.+....+.+.++.+..+.|... ..+.....+
T Consensus 251 ~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l 330 (440)
T PTZ00036 251 HIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINF 330 (440)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHH
Confidence 9999999999999999999999999989888888776655421 112344556
Q ss_pred hhhccccCCCCCccccccCCC
Q 026720 213 SNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...++..++.+|++..+++.+
T Consensus 331 i~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 331 ISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHCCCChhHCcCHHHHhCC
Confidence 677888899999998887753
No 39
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=5.8e-17 Score=138.37 Aligned_cols=173 Identities=22% Similarity=0.356 Sum_probs=130.8
Q ss_pred HHHHHHhhcCChHHHHHHHH----hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFN----LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~----~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.++..|+..|++.+...-.. .+++..+..+.. ++.|+. ++|..+++|++++|+|+++ .....+++
T Consensus 115 ~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~---------~lH~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 115 ALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVH---------HVHSKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred EEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEecCCCCHHHEEEeCCCCEEEE
Confidence 47788999999987654211 111222233333 366666 8999999999999999999 46778999
Q ss_pred eccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC
Q 026720 124 DLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP 200 (234)
Q Consensus 124 ~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~ 200 (234)
|||.++...... ......+++.|++||++.+ ..|+...|+||+|+++||+++|+.||.+....+...++......+
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~ 264 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP 264 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 999987654321 1234567889999999874 347899999999999999999999999887766666665544445
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+...+..+..+...++...+.+|+++.++++
T Consensus 265 ~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 265 LPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 55667778888999999999999999999875
No 40
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.69 E-value=4.2e-18 Score=144.79 Aligned_cols=172 Identities=20% Similarity=0.308 Sum_probs=138.6
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH---HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM---ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~---i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.+|.+|+.+|.||.-.+.-+ .-+++..+ ++|.+ -+ ..+|-+.+.+|+|+...|++.+ ...+++.||
T Consensus 706 MIiTEyMENGsLDsFLR~~D-----GqftviQLVgMLrGIA---sG--MkYLsdm~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 706 MIITEYMENGSLDSFLRQND-----GQFTVIQLVGMLRGIA---SG--MKYLSDMNYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred EEEhhhhhCCcHHHHHhhcC-----CceEeehHHHHHHHHH---HH--hHHHhhcCchhhhhhhhheeeccceEEEeccc
Confidence 57899999999998766433 22455444 44444 22 2367777889999999999995 567899999
Q ss_pred cccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCC
Q 026720 126 GMVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSP 200 (234)
Q Consensus 126 ~~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~ 200 (234)
|+.+.+....+ ..+-.....|.|||.+. .+.+++.+|+||+|+++||+++ |++||=+..+.+....|-+..+-|
T Consensus 776 GLSRvledd~~~~ytt~GGKIPiRWTAPEAIa-~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLP 854 (996)
T KOG0196|consen 776 GLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLP 854 (996)
T ss_pred cceeecccCCCccccccCCccceeecChhHhh-hcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCC
Confidence 99997654321 11112235699999998 4568999999999999999885 779999999999999999999999
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+..++.++..|+.-||..+...||+|.+|++
T Consensus 855 pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 855 PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 99999999999999999999999999998864
No 41
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.68 E-value=5.3e-17 Score=129.55 Aligned_cols=174 Identities=29% Similarity=0.534 Sum_probs=123.0
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.+|..|+. |.+.+...... .++...+..+.. ++.|+. ++|+.+++|++++|+|+++ .+...+++|||
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~---------~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG 148 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLS---------YCHKRKILHRDLKPQNLLINEKGELKLADFG 148 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCCCHHHEEECCCCCEEECcCc
Confidence 35566665 34444322111 122223333333 366677 8999999999999999999 46678999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+....... ......+++.|++||.+.+...++..+|+||+|++++++++|++||++....+.+..+.+..+.|....|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07871 149 LARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228 (288)
T ss_pred ceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHh
Confidence 887654321 1233456788999999875556889999999999999999999999999888888888888777766555
Q ss_pred cch-----------------------------hhhhhhhccccCCCCCccccccCCC
Q 026720 206 PLG-----------------------------IQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 206 ~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.. ...+...+...++.+|+|+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 432 1223444556678889999998865
No 42
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.68 E-value=8.2e-17 Score=132.62 Aligned_cols=175 Identities=23% Similarity=0.318 Sum_probs=121.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.+...--..+++..+..|... +.|+. ++|+.+++|+|++|+|+++ ..+..+++|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~---------~lH~~givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAID---------SIHQLGFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeEecCCCHHHeEECCCCCEEEeecc
Confidence 4688889999998877654334444555556555 66666 8999999999999999999 46778999999
Q ss_pred ccccccCCC------------------------------------CCCCcccCcccccccccccccCCCCcchHHHHHHH
Q 026720 127 MVKEIDSNL------------------------------------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAI 170 (234)
Q Consensus 127 ~a~~~~~~~------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~ 170 (234)
.+..+.... .....++++.|+|||++.+ ..|+..+|+||+|++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvi 225 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVI 225 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHH
Confidence 887543210 0123468889999999874 447899999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhh---CCCCCCCCcchhhh-hhhhc-cccCCCCCccccccCCC
Q 026720 171 MFEMLSFGILFPGKSSADQIYKICQLI---GSPTKDSWPLGIQL-ASNLN-WKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 171 l~e~~~~~~~f~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~ 233 (234)
++||++|..||.+....+...++.... ..|+....+..... +.+++ ....+..|+++++++++
T Consensus 226 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 226 MYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 999999999999888777776666422 12332223333333 33433 22233456777777654
No 43
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.67 E-value=7.7e-17 Score=129.50 Aligned_cols=176 Identities=28% Similarity=0.481 Sum_probs=120.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..+..+....-...++...+..+... +.|+. ++|+.+++|++++|.|+++ .....+++|||
T Consensus 78 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 78 LTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLS---------YIHQRYILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred EEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHEEECCCCCEEECCCC
Confidence 4566677753322222111111233334444433 66777 8999999999999999999 45678999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhhCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSA-DQIYKICQLIGSPTKDS 204 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~-~~~~~i~~~~~~~~~~~ 204 (234)
.+...... .......+++.|+|||++.+...++..+|+||+|++++++++|..||++..+. +.+.+++...+.|....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
T cd07869 149 LARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDT 228 (303)
T ss_pred cceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhh
Confidence 88754321 12233456788999999876566788999999999999999999999986544 45555666555554443
Q ss_pred Cc-------------------------------chhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WP-------------------------------LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
|+ .....+...+...++.+|+|..+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 229 WPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 32 223355566777889999999998864
No 44
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.67 E-value=2.4e-16 Score=125.68 Aligned_cols=136 Identities=36% Similarity=0.576 Sum_probs=110.4
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|+|+++ .....+++|||.+.............+++.|+|||.+.. ..++..+|+||+|++++|++
T Consensus 125 ~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~ 203 (290)
T cd07862 125 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ-SSYATPVDLWSVGCIFAEMF 203 (290)
T ss_pred HHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhC-CCCCCccchHHHHHHHHHHH
Confidence 8899999999999999999 467789999999876554333344567888999999864 34788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCCCCc--------------------------chhhhhhhhccccCCCCCccccc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKDSWP--------------------------LGIQLASNLNWKLPQMGGVNLLA 229 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~ 229 (234)
+|++||.+....+.+.++.+..+.|.+..|+ +....+...+....+.+|++..+
T Consensus 204 ~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~ 283 (290)
T cd07862 204 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS 283 (290)
T ss_pred cCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHH
Confidence 9999999999999998888877766554443 23345667788889999999999
Q ss_pred cCCC
Q 026720 230 VMPS 233 (234)
Q Consensus 230 ~~~~ 233 (234)
++++
T Consensus 284 ~l~h 287 (290)
T cd07862 284 ALSH 287 (290)
T ss_pred HhcC
Confidence 8864
No 45
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.67 E-value=1.3e-16 Score=123.07 Aligned_cols=122 Identities=39% Similarity=0.737 Sum_probs=104.5
Q ss_pred ccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eC----CeeeEeeccccccccCCC----CCCCcccCccc
Q 026720 77 QSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SK----GVIKIGDLGMVKEIDSNL----PCTDYVTTRWY 146 (234)
Q Consensus 77 ~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~----~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~ 146 (234)
.+..-+ |+|.. ++|+.-++|+|++|.|+++ .+ +..+++|+|.++.+.... .....+.+.+|
T Consensus 135 KsilwQil~Gv~---------YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWY 205 (438)
T KOG0666|consen 135 KSILWQILDGVH---------YLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWY 205 (438)
T ss_pred HHHHHHHHhhhH---------HHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEe
Confidence 344334 78888 9998889999999999998 44 789999999999876533 22346778999
Q ss_pred ccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHHhhCCCCCCCCcc
Q 026720 147 RGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGK---------SSADQIYKICQLIGSPTKDSWPL 207 (234)
Q Consensus 147 ~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~---------~~~~~~~~i~~~~~~~~~~~~~~ 207 (234)
+|||.+.+.++|+.++|+|+.||++.|+++.+++|.+. ...+++.+||+.+|.|....|+.
T Consensus 206 RAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~ 275 (438)
T KOG0666|consen 206 RAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPD 275 (438)
T ss_pred cChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchh
Confidence 99999999999999999999999999999999999874 46789999999999999999983
No 46
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.67 E-value=1.5e-16 Score=135.51 Aligned_cols=174 Identities=21% Similarity=0.378 Sum_probs=129.9
Q ss_pred HHHHHHHhhcCChHHHHHHH-H-h--hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeE
Q 026720 49 TALVEMYSKCGHVEKAFKVF-N-L--MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKI 122 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~-~-~--m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~ 122 (234)
..||..|+..|++.+...-. . . +.+..+..+.. ++.|+. ++|..+++|+|++|.|+++ .....++
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~---------~lH~~~ivHrDlkp~NIll~~~~~~kL 210 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALD---------EVHSRKMMHRDLKSANIFLMPTGIIKL 210 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HHHhCCEEECCcCHHhEEECCCCcEEE
Confidence 46788899999998754321 1 1 11112222222 255565 8899999999999999999 4677899
Q ss_pred eeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 123 GDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 123 ~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
.|||.+..+..... .....+++.|++||++.+ ..++..+|+||+|++++++++|+.||.+....+....+......
T Consensus 211 ~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 289 (478)
T PTZ00267 211 GDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER-KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD 289 (478)
T ss_pred EeCcCceecCCccccccccccCCCccccCHhHhCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 99999987644321 233467889999999864 45789999999999999999999999988777777666654444
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+.+..++..+..++..++...+..|+++++++.
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 455566778888888899999999999998865
No 47
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.67 E-value=7.8e-17 Score=128.34 Aligned_cols=174 Identities=29% Similarity=0.450 Sum_probs=123.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|.+|+..|.++...+.-..++...+..+... +.|+. ++|..+++|++++|+|+++ .....+++|||.
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIH---------WCHKNDIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 477788887766544322122333333444443 56666 8899999999999999999 466789999999
Q ss_pred cccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC---
Q 026720 128 VKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK--- 202 (234)
Q Consensus 128 a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~--- 202 (234)
+..+.... ......+++.|++||++.+. .++...|+||+|++++|+++|++||++....+.+..+.+..+..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd07848 147 ARNLSEGSNANYTEYVATRWYRSPELLLGA-PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQM 225 (287)
T ss_pred cccccccccccccccccccccCCcHHHcCC-CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHH
Confidence 88764321 12234677889999998743 4788999999999999999999999988777766655443221110
Q ss_pred ----------------------------CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 ----------------------------DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..+..+.+.+...++.+|+++++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 226 KLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0123346677788889999999999999875
No 48
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.67 E-value=6.8e-17 Score=131.55 Aligned_cols=173 Identities=24% Similarity=0.322 Sum_probs=127.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+...-...+++..+..|... +.|+. ++|..+++|++++|+|+++ .....++.|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVD---------ALHELGYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCccccCCCHHHEEECCCCCEEEEeCc
Confidence 4577888999998876544333443344444433 66776 8999999999999999999 46678999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh---CCCCCC
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI---GSPTKD 203 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~---~~~~~~ 203 (234)
.+..... ......+++.|++||++.+. .++..+|+||+|++++||++|..||.+....+....+.... ..|...
T Consensus 147 ~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 223 (333)
T cd05600 147 LSKGIVT--YANSVVGSPDYMAPEVLRGK-GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD 223 (333)
T ss_pred CCccccc--ccCCcccCccccChhHhcCC-CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCC
Confidence 9887654 23445788899999998744 57899999999999999999999999877666555554322 122221
Q ss_pred ----CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 ----SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..+..+...++..++..|+++++++.+
T Consensus 224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 335566667777778899999999988754
No 49
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.67 E-value=1.4e-16 Score=129.84 Aligned_cols=174 Identities=27% Similarity=0.415 Sum_probs=120.6
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+. +++.+...-...++...+..+... +.|+. ++|+.+++|++++|+|+++ ..+..+++|||.
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~---------~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~ 149 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALK---------YIHTANVFHRDLKPKNILANADCKLKICDFGL 149 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHeEECCCCcEEEccCcc
Confidence 56777875 555544332222333333333333 66676 8999999999999999999 456789999999
Q ss_pred cccccCCC----CCCCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 128 VKEIDSNL----PCTDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 128 a~~~~~~~----~~~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+....... ......+++.|+|||++... ..++..+|+||+|++++|+++|++||++......+..+.+..+.|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 229 (338)
T cd07859 150 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP 229 (338)
T ss_pred ccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 87653221 12345678899999987532 45788999999999999999999999987766655444444333321
Q ss_pred C------------------------------CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 D------------------------------SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. ..+..+..+...++...+.+|+++++++.+
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 1 122344567777888899999999998864
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.67 E-value=1.1e-16 Score=127.56 Aligned_cols=174 Identities=21% Similarity=0.286 Sum_probs=123.1
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++..|+..|++........ .+++..+..+... +.|+. ++|+.+++|++++|.|+++ .....++.|
T Consensus 75 ~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~iiH~dikp~Nill~~~~~~kl~D 145 (285)
T cd05631 75 LCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLE---------DLQRERIVYRDLKPENILLDDRGHIRISD 145 (285)
T ss_pred EEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEEeCCCCHHHEEECCCCCEEEee
Confidence 457778888898876543211 1222233344333 66666 8899999999999999999 457789999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC---CCC
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG---SPT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~---~~~ 201 (234)
||.+.............++..|++||++.+ ..|+..+|+||+|++++++++|+.||.+.........+..... ...
T Consensus 146 fg~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd05631 146 LGLAVQIPEGETVRGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEY 224 (285)
T ss_pred CCCcEEcCCCCeecCCCCCCCccCHhhhcC-CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccC
Confidence 999887644333344567889999999874 4578999999999999999999999997654333223322222 222
Q ss_pred CCCCcchhhhhhhhccccCCCCCcc-----ccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVN-----LLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 232 (234)
....+..+..+.+.++...+.+|++ ++++++
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 3345667788888889988999986 566654
No 51
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.66 E-value=8.5e-17 Score=132.85 Aligned_cols=171 Identities=20% Similarity=0.279 Sum_probs=126.1
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
+|.+||.. ++....+--..|++..+...... ++|+- ++|+..+.|++++|.++++ ..+..++++||.|
T Consensus 78 vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~---------yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 78 VVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALY---------YLHSNRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred EEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHH---------HHHhcCcccccCCcceeeecCCCceeechhhhh
Confidence 56677764 66666665566777777666665 88888 8999889999999999999 5678999999999
Q ss_pred ccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcc
Q 026720 129 KEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPL 207 (234)
Q Consensus 129 ~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 207 (234)
+.+.... -.....++|.|+|||++.+ ..|+..+|+||+||++||+..|++||....-......|...-..|+. .-+.
T Consensus 148 r~m~~~t~vltsikGtPlYmAPElv~e-~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~-~~S~ 225 (808)
T KOG0597|consen 148 RAMSTNTSVLTSIKGTPLYMAPELVEE-QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS-TASS 225 (808)
T ss_pred hhcccCceeeeeccCcccccCHHHHcC-CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc-cccH
Confidence 9875432 3445678999999999984 45899999999999999999999999876555555555544333333 2222
Q ss_pred hhhhhhhhccccCCCCCccccccCCC
Q 026720 208 GIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+.+--...++-+|++|.+++.+
T Consensus 226 ~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 226 SFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHHHHHHHhhcChhhcccHHHHhcC
Confidence 33334444445577888888877654
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.66 E-value=1.6e-16 Score=127.02 Aligned_cols=170 Identities=21% Similarity=0.199 Sum_probs=124.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.+..+-...+++..+..|... +.|+. ++|+.+++|++++|+|+++ ..+..++.|||.
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 77 YMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALE---------YLHSKEIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeecCCCHHHeEECCCCCEEEEecCc
Confidence 356677888887765543333333344444444 66777 8999999999999999999 466789999999
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcc
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPL 207 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 207 (234)
+...... .....+++.|+|||++.+ ..++..+|+||+|++++++++|+.||.+.........+...-. .-+...+.
T Consensus 148 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~ 223 (291)
T cd05612 148 AKKLRDR--TWTLCGTPEYLAPEVIQS-KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL-EFPRHLDL 223 (291)
T ss_pred chhccCC--cccccCChhhcCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc-CCCccCCH
Confidence 8876542 223467888999999864 4478899999999999999999999998776666555544321 22234466
Q ss_pred hhhhhhhhccccCCCCCcc-----ccccCC
Q 026720 208 GIQLASNLNWKLPQMGGVN-----LLAVMP 232 (234)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~-----~~~~~~ 232 (234)
.+..+.+.++..++.+|++ +++++.
T Consensus 224 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 224 YAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 7778888888888888885 776654
No 53
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.66 E-value=7.9e-17 Score=131.93 Aligned_cols=173 Identities=25% Similarity=0.344 Sum_probs=127.0
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.+...-...++...+..+... +.|+. ++|..+++|++++|+|+++ .....++.|||.
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~---------~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 77 YLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALD---------SVHKLGFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred EEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccCCCHHHeEECCCCCEEeecCCC
Confidence 567788888888776543322333333334333 66666 8899999999999999999 466789999998
Q ss_pred cccccCCC------------------------------CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhC
Q 026720 128 VKEIDSNL------------------------------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSF 177 (234)
Q Consensus 128 a~~~~~~~------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~ 177 (234)
+..+.... ......+++.|+|||++.+. .++..+|+||+|++++|+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccC
Confidence 87654432 12335678889999998744 578999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHH---hhCCCCCCCCcchhhhhhhhccccCCCCCcc-ccccCCC
Q 026720 178 GILFPGKSSADQIYKICQ---LIGSPTKDSWPLGIQLASNLNWKLPQMGGVN-LLAVMPS 233 (234)
Q Consensus 178 ~~~f~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 233 (234)
+.||.+........++.. ....|....++..+..++..+.. ++.+|++ +++++.+
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 999998887766666655 22334444567777888777776 7778888 8888764
No 54
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=4.9e-16 Score=124.25 Aligned_cols=137 Identities=31% Similarity=0.506 Sum_probs=119.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHHHH-HHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMIS-GLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~-~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
..|++|+..|++---++.+.+..+|..+.|.+-|. |+- .+|+.+++.++++.||+++ ..+..++.|||.
T Consensus 426 yFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLF---------FLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGm 496 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLF---------FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGM 496 (683)
T ss_pred eeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhh---------hhhcCCeeeeeccccceEeccCCceEeeeccc
Confidence 35788999999988888889999999999988754 444 6889999999999999999 578999999999
Q ss_pred ccc-ccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 026720 128 VKE-IDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL 196 (234)
Q Consensus 128 a~~-~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~ 196 (234)
+++ +.......++++++-|+|||++.+.+ |...+|.||+|++|+||+.|.+||+|.+..+....|.+.
T Consensus 497 cKEni~~~~TTkTFCGTPdYiAPEIi~YqP-YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh 565 (683)
T KOG0696|consen 497 CKENIFDGVTTKTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH 565 (683)
T ss_pred ccccccCCcceeeecCCCcccccceEEecc-cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc
Confidence 886 44455667889999999999998544 899999999999999999999999999998888888764
No 55
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.65 E-value=3.7e-16 Score=128.32 Aligned_cols=171 Identities=30% Similarity=0.462 Sum_probs=121.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+..+.. . ..++...+..+.. ++.|+. ++|+.+++|++++|+|+++ .....+++|||.
T Consensus 98 ~lv~e~~~~~l~~~~-~--~~l~~~~~~~~~~qi~~aL~---------~LH~~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 98 YLVMELMDANLCQVI-Q--MELDHERMSYLLYQMLCGIK---------HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred EEEhhhhcccHHHHH-h--hcCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 467777765433221 1 1122222333333 366666 8999999999999999999 456789999999
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC---
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS--- 204 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~--- 204 (234)
+.............+++.|++||++.+ ..++..+|+||+|++++++++|+.||++....+....+.+..+.+.+..
T Consensus 166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (355)
T cd07874 166 ARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244 (355)
T ss_pred cccCCCccccCCccccCCccCHHHHcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 987655444445677889999999864 4478899999999999999999999999887777776666554432110
Q ss_pred --------------------------------------CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 --------------------------------------WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...+...++.+|+++.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 11234556677788899999999998864
No 56
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.65 E-value=2.8e-16 Score=123.23 Aligned_cols=173 Identities=20% Similarity=0.267 Sum_probs=123.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+....-..+++..+..+... +.++. ++|+.+++|++++|.++++ .....+++|++.
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~---------~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~ 141 (257)
T cd05116 71 MLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMK---------YLEETNFVHRDLAARNVLLVTQHYAKISDFGL 141 (257)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCEeecccchhhEEEcCCCeEEECCCcc
Confidence 467778888888765433222333344444443 55555 8899999999999999999 456789999998
Q ss_pred cccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 128 VKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 128 a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+..+..... ......+..|++||.... ..++...|+||+|++++|+++ |..||.+....+....+-+....+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~ 220 (257)
T cd05116 142 SKALGADENYYKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP 220 (257)
T ss_pred ccccCCCCCeeeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC
Confidence 877643221 111122357899998753 346789999999999999997 89999887666555555433333344
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..++..|+..++..||++++|..
T Consensus 221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 221 QRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 556788899999999999999999998864
No 57
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.65 E-value=4.6e-16 Score=126.89 Aligned_cols=135 Identities=20% Similarity=0.321 Sum_probs=101.5
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|+|++|.|+++. ....+++|||.++.+.... ......++..|++||.+.+ ..|+..+|+||+|+++|
T Consensus 189 ~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~ 267 (338)
T cd05102 189 FLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLW 267 (338)
T ss_pred HHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc-CCCCcccCHHHHHHHHH
Confidence 78999999999999999994 6778999999987653321 1112234467999999863 44789999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHh-hCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQL-IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||++....+........ ...+.+...+..+..+...|+...+.+||++.+++.
T Consensus 268 el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 268 EIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9997 99999986654444343332 222233455667888999999999999999998864
No 58
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=5.9e-16 Score=130.25 Aligned_cols=160 Identities=28% Similarity=0.379 Sum_probs=115.4
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
..|+.|...|++-.-.+ -+..+++....|.+= +.|+. ++|..++++||++.||+++ ..+++++.|||+
T Consensus 445 ~fvmey~~Ggdm~~~~~-~~~F~e~rarfyaAev~l~L~---------fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGl 514 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHIH-TDVFSEPRARFYAAEVVLGLQ---------FLHENGIIYRDLKLDNLLLDTEGHVKIADFGL 514 (694)
T ss_pred EEEEEecCCCcEEEEEe-cccccHHHHHHHHHHHHHHHH---------HHHhcCceeeecchhheEEcccCcEEeccccc
Confidence 35667777776322111 112233445556554 77777 8999999999999999999 579999999999
Q ss_pred ccccc-CCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEID-SNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+++.. ......+++||+-|+|||++.. ..|+..+|.||+|+++|||+.|..||+|++..+..-.|...-..-+..--.
T Consensus 515 cKe~m~~g~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ 593 (694)
T KOG0694|consen 515 CKEGMGQGDRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSK 593 (694)
T ss_pred ccccCCCCCccccccCChhhcChhhhcc-CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccH
Confidence 99865 4456778999999999999984 559999999999999999999999999998888777765533322222222
Q ss_pred chhhhhhhhccccC
Q 026720 207 LGIQLASNLNWKLP 220 (234)
Q Consensus 207 ~~~~~~~~~~~~~~ 220 (234)
+++.-+.++..+.|
T Consensus 594 ea~~il~~ll~k~p 607 (694)
T KOG0694|consen 594 EAIAIMRRLLRKNP 607 (694)
T ss_pred HHHHHHHHHhccCc
Confidence 34444444444443
No 59
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.64 E-value=3e-16 Score=127.27 Aligned_cols=167 Identities=25% Similarity=0.335 Sum_probs=120.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|++.........+++..+..|... +.|+. ++|..+++|++++|.|+++ .....+++|||.
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~---------~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~ 147 (323)
T cd05616 77 YFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF---------FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred EEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCEEecCCCHHHeEECCCCcEEEccCCC
Confidence 478889999988776554444444444555444 66777 8899999999999999999 467789999998
Q ss_pred cccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+..... ........+++.|+|||++.+ ..++..+|+||+|++++|+++|+.||.+....+....+.+..... +...+
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~-p~~~s 225 (323)
T cd05616 148 CKENMWDGVTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY-PKSMS 225 (323)
T ss_pred ceecCCCCCccccCCCChhhcCHHHhcC-CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCcCC
Confidence 875432 222334567889999999874 447899999999999999999999999887777666665533222 22344
Q ss_pred chhhhhhhhccccCCCCCccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~ 227 (234)
.....+...+...++.+|++.
T Consensus 226 ~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 226 KEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHHHHHHcccCHHhcCCC
Confidence 555556665666666666653
No 60
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.64 E-value=1.5e-16 Score=129.07 Aligned_cols=173 Identities=24% Similarity=0.265 Sum_probs=122.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+.+...--..+.+..+..+... +.|+. ++|+.+++|+|++|+|+++ .....++.|||
T Consensus 70 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG 140 (323)
T cd05571 70 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALG---------YLHSCDVVYRDLKLENLMLDKDGHIKITDFG 140 (323)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeEeCCCCHHHEEECCCCCEEEeeCC
Confidence 3577888888888655432222333333334333 66666 8999999999999999999 46678999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.++..... .......+++.|+|||++.+ ..|+..+|+||+|++++|+++|..||.+.........+..... .-+...
T Consensus 141 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-~~p~~~ 218 (323)
T cd05571 141 LCKEGISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRTL 218 (323)
T ss_pred CCcccccCCCcccceecCccccChhhhcC-CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCC
Confidence 88764322 12234567889999999864 4478999999999999999999999987765554444433222 223455
Q ss_pred cchhhhhhhhccccCCCCCc-----cccccCC
Q 026720 206 PLGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
+..+..+...++..++.+|+ +..++++
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 219 SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 66778888888888888888 6666654
No 61
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.64 E-value=5.6e-17 Score=131.88 Aligned_cols=175 Identities=22% Similarity=0.231 Sum_probs=124.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+.....-...+++..+..+... +.|+. ++|..+++|++++|+|+++ .....+++|||
T Consensus 71 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~---------~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 71 LYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALE---------HLHKYDIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred EEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEeccCCHHHeEECCCCCEEEecCC
Confidence 4677888988888765443333444444444443 77777 8999999999999999999 45678999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+...... .......++..|++||.+.+...++...|+||+|+++++|++|..||.+.........+............
T Consensus 142 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~ 221 (330)
T cd05586 142 LSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVL 221 (330)
T ss_pred cCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccC
Confidence 88764332 22334567889999999865555788999999999999999999999987665555555433233333345
Q ss_pred cchhhhhhhhccccCCCCCc----cccccCC
Q 026720 206 PLGIQLASNLNWKLPQMGGV----NLLAVMP 232 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 232 (234)
+.....+...++..++.+|+ ++++++.
T Consensus 222 ~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 222 SDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 56667777777777777886 4555543
No 62
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.64 E-value=3e-16 Score=127.10 Aligned_cols=167 Identities=25% Similarity=0.267 Sum_probs=121.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|++.....--..+++..+..+... +.|+. ++|..+++|++++|.|+++ .....+++|||.
T Consensus 72 ~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~---------~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~ 142 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALM---------FLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 142 (320)
T ss_pred EEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEeCCCCHHHeEECCCCcEEEeeCCC
Confidence 477788888888765443333343344444444 66777 8999999999999999999 466789999998
Q ss_pred cccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+..... ........+++.|+|||++.+ ..++..+|+||+|++++++++|+.||.+....+....+..... ..+...+
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~ 220 (320)
T cd05590 143 CKEGIFNGKTTSTFCGTPDYIAPEILQE-MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-VYPTWLS 220 (320)
T ss_pred CeecCcCCCcccccccCccccCHHHHcC-CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC-CCCCCCC
Confidence 876432 112234567889999999864 4478899999999999999999999998877666666654322 2223455
Q ss_pred chhhhhhhhccccCCCCCccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~ 227 (234)
..+..+...+...++.+|++.
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCC
Confidence 666777777777888888886
No 63
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.64 E-value=2.2e-16 Score=128.42 Aligned_cols=171 Identities=19% Similarity=0.222 Sum_probs=123.3
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|++.+..+-....++..+..|... +.|+. ++|..+++|++++|.|+++ .....+++|||
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~---------~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFE---------YLHSKDIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeecCCCHHHEEECCCCCEEEeecc
Confidence 3577778888888765443222333333334333 66676 8999999999999999999 46778999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
.+...... .....+++.|+|||++.+ ..++..+|+||+|++++++++|..||.+........++.+.. .+-+...+
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~-~~~p~~~~ 239 (329)
T PTZ00263 164 FAKKVPDR--TFTLCGTPEYLAPEVIQS-KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR-LKFPNWFD 239 (329)
T ss_pred CceEcCCC--cceecCChhhcCHHHHcC-CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC-cCCCCCCC
Confidence 98876442 223467888999999874 346889999999999999999999999877666655554421 12233455
Q ss_pred chhhhhhhhccccCCCCCcc-----ccccCC
Q 026720 207 LGIQLASNLNWKLPQMGGVN-----LLAVMP 232 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 232 (234)
..+..+...++..++.+|++ +++++.
T Consensus 240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 66777888888888888875 566654
No 64
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.64 E-value=4.1e-16 Score=118.51 Aligned_cols=178 Identities=21% Similarity=0.254 Sum_probs=129.2
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHhhccC-ccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEe
Q 026720 46 AIGTALVEMYSKCGHVEKAFKVFNLMREK-NLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIG 123 (234)
Q Consensus 46 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~-~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~ 123 (234)
-+|-.||..++..|.+-+-..---.+.++ .....-.++.|.+ ++|...++|+|++|.|+++. ..-.++.
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVe---------ylHa~~IVHRDLKpENILlddn~~i~is 165 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVE---------YLHARNIVHRDLKPENILLDDNMNIKIS 165 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHH---------HHHHhhhhhcccChhheeeccccceEEe
Confidence 35667888888888665432211111111 1112234466666 89988899999999999994 4567999
Q ss_pred eccccccccCCCCCCCcccCccccccccccc-----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC
Q 026720 124 DLGMVKEIDSNLPCTDYVTTRWYRGPEVLLF-----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG 198 (234)
Q Consensus 124 ~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~ 198 (234)
|||.+.++...-.....+++|+|.|||.+.. .+.|+.-+|+|++|++++.++.|.+||--......+.-|.+.--
T Consensus 166 DFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky 245 (411)
T KOG0599|consen 166 DFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY 245 (411)
T ss_pred ccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc
Confidence 9999999988777888999999999999743 45689999999999999999999999976666666666666444
Q ss_pred CCCCCCCc---chhhhhhhhccccCCCCCccccccCC
Q 026720 199 SPTKDSWP---LGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 199 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+.....|. +....++..+...++.+|++-.+.+.
T Consensus 246 qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 246 QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 44444454 44445555566778888888877664
No 65
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.63 E-value=1.9e-15 Score=123.55 Aligned_cols=123 Identities=32% Similarity=0.486 Sum_probs=101.1
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++.++++|.|.++ ..+++++.|||.|+.+......-++++++-|.|||++.... ....+|.||+|++++|++
T Consensus 535 YLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL 613 (732)
T KOG0614|consen 535 YLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELL 613 (732)
T ss_pred HHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccC-cchhhHHHHHHHHHHHHH
Confidence 7899999999999999999 68999999999999998877778899999999999998444 468899999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHh---hCCCCCCCCcchhhhhhhhccccCC
Q 026720 176 SFGILFPGKSSADQIYKICQL---IGSPTKDSWPLGIQLASNLNWKLPQ 221 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (234)
+|++||++.+....-..|.+. +..|...+. .+.++...+|...|.
T Consensus 614 ~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k-~a~~Lik~LCr~~P~ 661 (732)
T KOG0614|consen 614 TGSPPFSGVDPMKTYNLILKGIDKIEFPRRITK-TATDLIKKLCRDNPT 661 (732)
T ss_pred cCCCCCCCCchHHHHHHHHhhhhhhhcccccch-hHHHHHHHHHhcCcH
Confidence 999999999877766666553 334433332 356666677776654
No 66
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.63 E-value=5.5e-16 Score=138.58 Aligned_cols=174 Identities=23% Similarity=0.352 Sum_probs=128.9
Q ss_pred HHHHHHhhcCChHHHHHHH----HhhccCccccHHHH-HHHHHhcCCchhhhHhhh-------cccccCCcCCCcEEeeC
Q 026720 50 ALVEMYSKCGHVEKAFKVF----NLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-------QGYFHRDLKPSNLLVSK 117 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~----~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-------~~~~~~~l~p~~~~~~~ 117 (234)
.||..|+..|.+.+.+.-. ..+++..+..|... +.|+. ++|. ..++|++++|.++++..
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALa---------YLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALA---------YCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH---------HHHhcccccccCCceeccCcHHHeEeec
Confidence 5788899999998766532 12333444444443 66666 7776 34899999999999842
Q ss_pred ------------------CeeeEeeccccccccCCCCCCCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHhCC
Q 026720 118 ------------------GVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLSFG 178 (234)
Q Consensus 118 ------------------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~~~ 178 (234)
..+++.|||.+..+..........+++.|+|||++.+. ..++..+|+||+||++|+|++|.
T Consensus 161 ~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 161 GIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred CccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 23689999998876443333445788999999998542 34788999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 179 ILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 179 ~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.||........+...............+..+..++..++...+.+||++.+++.
T Consensus 241 ~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 241 TPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 999987777776665554333333455677888889999999999999998874
No 67
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.63 E-value=3e-16 Score=127.65 Aligned_cols=174 Identities=21% Similarity=0.254 Sum_probs=120.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.+...--..+++..+..|.. ++.|+. ++|+.+++|+|++|.|+++ .....+++|||.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~ 151 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALE---------HLHKLGIVYRDIKLENILLDSEGHVVLTDFGL 151 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCcEecCCCHHHeEECCCCCEEEeeCcC
Confidence 47788898888876543322333334444543 366666 8999999999999999999 466789999999
Q ss_pred cccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhhCCCCC
Q 026720 128 VKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSA---DQIYKICQLIGSPTK 202 (234)
Q Consensus 128 a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~---~~~~~i~~~~~~~~~ 202 (234)
+....... ......++..|++||++.+...++...|+||+|++++|+++|..||...... ....+.......+.+
T Consensus 152 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd05614 152 SKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP 231 (332)
T ss_pred CccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 87653322 1223567889999999875545788999999999999999999999754322 222221112222333
Q ss_pred CCCcchhhhhhhhccccCCCCCc-----cccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
...+..+..+...++..++.+|+ +.+++++
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 232 SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 44566777888888888888888 5556654
No 68
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.63 E-value=4.8e-16 Score=126.13 Aligned_cols=167 Identities=25% Similarity=0.329 Sum_probs=119.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|++.+...-...++++....|... +.|+. ++|..+++|++++|+|+++ ..+..++.|||.
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~ 147 (324)
T cd05587 77 YFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF---------FLHSKGIIYRDLKLDNVMLDAEGHIKIADFGM 147 (324)
T ss_pred EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEecCCCHHHeEEcCCCCEEEeecCc
Confidence 477788888988766544334444455555544 67777 8999999999999999999 466789999998
Q ss_pred cccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+..... ........+++.|++||++.+ ..++..+|+||+|++++++++|+.||.+....+....+.+.... -+...+
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~ 225 (324)
T cd05587 148 CKENIFGGKTTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-YPKSLS 225 (324)
T ss_pred ceecCCCCCceeeecCCccccChhhhcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCC
Confidence 775321 112233567889999999874 34788999999999999999999999988776666665543222 223344
Q ss_pred chhhhhhhhccccCCCCCccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~ 227 (234)
.....+...++...+.+|++.
T Consensus 226 ~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 226 KEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHHHHHHHHhhcCHHHcCCC
Confidence 455556666666666677654
No 69
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.63 E-value=5e-16 Score=125.59 Aligned_cols=172 Identities=22% Similarity=0.238 Sum_probs=121.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.....--..++...+..|... +.|+. ++|..+++|++++|.|+++ .....++.|||
T Consensus 71 ~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05620 71 LFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQ---------FLHSKGIIYRDLKLDNVMLDRDGHIKIADFG 141 (316)
T ss_pred EEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEecCCCHHHeEECCCCCEEeCccC
Confidence 3578889998888765432122222333334333 66776 8999999999999999999 45678999999
Q ss_pred ccccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+..... ........+++.|+|||++.+ ..++..+|+||+|++++|+++|..||.+.........+... ....+...
T Consensus 142 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~-~~~~~~~~ 219 (316)
T cd05620 142 MCKENVFGDNRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD-TPHYPRWI 219 (316)
T ss_pred CCeecccCCCceeccCCCcCccCHHHHcC-CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCCCC
Confidence 8875322 112234567889999999874 44788999999999999999999999987665554444322 22223345
Q ss_pred cchhhhhhhhccccCCCCCcccc-ccC
Q 026720 206 PLGIQLASNLNWKLPQMGGVNLL-AVM 231 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~-~~~ 231 (234)
+..+..+++.++..++.+|+++. ++.
T Consensus 220 ~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 220 TKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 66777788888888888898874 453
No 70
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.63 E-value=4e-16 Score=125.67 Aligned_cols=137 Identities=34% Similarity=0.613 Sum_probs=106.2
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|+.+++|++++|.|+++ .....++.|||.+....... ......++..|.+||.+.+...++...|+||+|++++++
T Consensus 119 ~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el 198 (309)
T cd07872 119 YCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEM 198 (309)
T ss_pred HHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 8899999999999999999 46678999999887643321 122345677899999987555678999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc-----------------------------chhhhhhhhccccCCCCCc
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKDSWP-----------------------------LGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~ 225 (234)
++|++||++....+....+.+..+.|....|+ .....+...+...++.+|+
T Consensus 199 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 278 (309)
T cd07872 199 ASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRI 278 (309)
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCC
Confidence 99999999988888877777776665544432 2333455566677888999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
+..+++.+
T Consensus 279 t~~e~l~h 286 (309)
T cd07872 279 SAEEAMKH 286 (309)
T ss_pred CHHHHhcC
Confidence 99988764
No 71
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.63 E-value=5.5e-16 Score=125.34 Aligned_cols=168 Identities=24% Similarity=0.303 Sum_probs=122.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.....-...+++..+..|... +.|+. ++|..+++|++++|+|+++ .....++.|||.
T Consensus 72 ~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~---------~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~ 142 (316)
T cd05592 72 FFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQ---------FLHKKGIIYRDLKLDNVLLDKDGHIKIADFGM 142 (316)
T ss_pred EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCEEeCCCCHHHeEECCCCCEEEccCcC
Confidence 477888888888766543333444445555544 67777 8999999999999999999 467789999999
Q ss_pred cccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+...... .......+++.|++||.+.+ ..++...|+||+|++++|+++|+.||.+.........+... ....+...+
T Consensus 143 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~ 220 (316)
T cd05592 143 CKENMNGEGKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND-RPHFPRWIS 220 (316)
T ss_pred CeECCCCCCccccccCCccccCHHHHcC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCCCCC
Confidence 8764322 12234567889999999874 34789999999999999999999999988776665555432 122234455
Q ss_pred chhhhhhhhccccCCCCCcccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNLL 228 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~ 228 (234)
..+..+...++...+.+|++..
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCCh
Confidence 6677777778888888888764
No 72
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.63 E-value=4.1e-16 Score=122.95 Aligned_cols=175 Identities=19% Similarity=0.261 Sum_probs=127.6
Q ss_pred HHHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 48 GTALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++|..|+..|.+++...... .++...+..|... +.|+. ++|+.+++|++++|+++++ .+...++.+
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~---------~lH~~~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMK---------YLSEMGYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCEeeccccHhhEEEcCCCcEEECC
Confidence 3568889999999987654321 2333333344333 55666 8899999999999999999 456778888
Q ss_pred ccccccccCCCCCC--CcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 125 LGMVKEIDSNLPCT--DYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
++............ ....+..|.+||.+.+ ..++..+|+||+|++++|+++ |..||.+....+.+..+.+....|.
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~ 229 (266)
T cd05064 151 FRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY-HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPA 229 (266)
T ss_pred CcccccccccchhcccCCCCceeecCHHHHhh-CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCC
Confidence 88665432221111 1223457899998864 447889999999999999875 9999998877776666655555566
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+..++..+..+...||...+.+||++++|++
T Consensus 230 ~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 230 PRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 6777888888899999999999999988764
No 73
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.63 E-value=5.7e-16 Score=125.03 Aligned_cols=168 Identities=23% Similarity=0.247 Sum_probs=120.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+.+...--..++...+..+... +.|+. ++|..+++|++++|.|+++ .....+++|||
T Consensus 68 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg 138 (312)
T cd05585 68 LYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALE---------NLHKFNVIYRDLKPENILLDYQGHIALCDFG 138 (312)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeEeCCCCHHHeEECCCCcEEEEECc
Confidence 4577788888888765432222333333334333 56666 8899999999999999999 46778999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+....... ......+++.|++||++.+ ..++..+|+||+|++++++++|..||.+.........+.... ...+...
T Consensus 139 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~-~~~~~~~ 216 (312)
T cd05585 139 LCKLNMKDDDKTNTFCGTPEYLAPELLLG-HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP-LRFPDGF 216 (312)
T ss_pred ccccCccCCCccccccCCcccCCHHHHcC-CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC-CCCCCcC
Confidence 887543221 2234567889999999874 447899999999999999999999999877666555554322 2223445
Q ss_pred cchhhhhhhhccccCCCCCccc
Q 026720 206 PLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
+..+..+...++..++.+|+++
T Consensus 217 ~~~~~~li~~~L~~dp~~R~~~ 238 (312)
T cd05585 217 DRDAKDLLIGLLSRDPTRRLGY 238 (312)
T ss_pred CHHHHHHHHHHcCCCHHHcCCC
Confidence 6677788888888899999765
No 74
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.63 E-value=2.9e-16 Score=128.20 Aligned_cols=171 Identities=21% Similarity=0.165 Sum_probs=122.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+...--..+++..+..|... +.|+. ++|+.+++|++++|.|+++ ..+..+++|||
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~---------~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG 176 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFE---------YLQSLNIVYRDLKPENLLLDKDGFIKMTDFG 176 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEccCCCHHHEEECCCCCEEEecCC
Confidence 3578888998988776543323333334444444 66666 8899999999999999999 46778999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
.+..+... .....+++.|+|||++.+ ..++..+|+||+|++++||++|..||.+........++.+..... +...+
T Consensus 177 ~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-p~~~~ 252 (340)
T PTZ00426 177 FAKVVDTR--TYTLCGTPEYIAPEILLN-VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF-PKFLD 252 (340)
T ss_pred CCeecCCC--cceecCChhhcCHHHHhC-CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCC-CCCCC
Confidence 98865432 234567889999999864 447889999999999999999999999887766666665543322 23445
Q ss_pred chhhhhhhhccccCCCCCc-----cccccCC
Q 026720 207 LGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
.....+++.+....+.+|. ++++++.
T Consensus 253 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 253 NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred HHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 5566666666666666663 6666654
No 75
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.63 E-value=5.8e-16 Score=125.34 Aligned_cols=168 Identities=26% Similarity=0.338 Sum_probs=122.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+..-..-...+++..+..+... +.|+. ++|+.+++|++++|.|+++ .....++.|||
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~---------~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg 141 (318)
T cd05570 71 LFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQ---------FLHERGIIYRDLKLDNVLLDSEGHIKIADFG 141 (318)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeEccCCCHHHeEECCCCcEEecccC
Confidence 3577788888888655433223444444444444 66666 8899999999999999999 46678999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+...... .......++..|++||++.+ ..++...|+||+|++++++++|..||.+.........+..... ..+...
T Consensus 142 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~-~~~~~~ 219 (318)
T cd05570 142 MCKEGILGGVTTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV-RYPRWL 219 (318)
T ss_pred CCeecCcCCCcccceecCccccCHHHhcC-CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-CCCCcC
Confidence 88653221 12233457788999999874 4478899999999999999999999998776665555543322 223456
Q ss_pred cchhhhhhhhccccCCCCCccc
Q 026720 206 PLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
+..+..+++.++..++.+|++.
T Consensus 220 ~~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 220 SKEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred CHHHHHHHHHHccCCHHHcCCC
Confidence 6778888889999999999998
No 76
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.62 E-value=1.1e-16 Score=119.70 Aligned_cols=184 Identities=18% Similarity=0.255 Sum_probs=129.0
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
...|+..|.+.|++.+-.+... .+.+.++=...+.-+...-++.++++-+.....|+|++|.|++++ +....+.|||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k--~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLK--IKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eEEEEeehhccccHHHHHHHHh--hcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 3456778889998777554321 134555555555555444455554444443489999999999995 5788999999
Q ss_pred ccccccCCCC----------CCCcccCccccccccccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCC---ChHHHHH
Q 026720 127 MVKEIDSNLP----------CTDYVTTRWYRGPEVLLFSE--IYGPEVDKWAMGAIMFEMLSFGILFPGK---SSADQIY 191 (234)
Q Consensus 127 ~a~~~~~~~~----------~~~~~~~~~~~~pe~~~~~~--~~~~~~d~~s~g~~l~e~~~~~~~f~~~---~~~~~~~ 191 (234)
.+.+...... .....++..|+|||.+.-.. ..+.++|+||+||++|+++.|..||.-. +..-++.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 9887533211 11123566799999985322 2368999999999999999999999832 2222221
Q ss_pred HHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 192 KICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 192 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
-.-.++..|....+++.+..+++.+...++.+||++.+++++
T Consensus 255 v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 255 VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 122366778888899999999999999999999999998764
No 77
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.62 E-value=4.4e-16 Score=126.29 Aligned_cols=172 Identities=24% Similarity=0.284 Sum_probs=120.0
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.....--..+++..+..+.. ++.|+. ++|..+++|+|++|+|+++ .....+++|||.
T Consensus 71 ~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~---------~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 141 (323)
T cd05595 71 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE---------YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 141 (323)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEecCCCHHHEEEcCCCCEEecccHH
Confidence 57788888888865432211222233333433 366666 8999999999999999999 466789999998
Q ss_pred cccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+...... .......+++.|++||++.+ ..++..+|+||+|++++|+++|+.||.+.........+...-.. .+..++
T Consensus 142 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~-~p~~~~ 219 (323)
T cd05595 142 CKEGISDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLS 219 (323)
T ss_pred hccccCCCCccccccCCcCcCCcccccC-CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-CCCCCC
Confidence 7754321 12234567889999999864 44789999999999999999999999877666555554432222 233556
Q ss_pred chhhhhhhhccccCCCCCc-----cccccCC
Q 026720 207 LGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
..+..+...++...+.+|+ +..++++
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 220 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 6777787778877777776 5555543
No 78
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.62 E-value=3.9e-16 Score=126.45 Aligned_cols=166 Identities=26% Similarity=0.274 Sum_probs=119.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+.....-...+++..+..|... +.|+. ++|+.+++|++++|+|+++ .....+++|||
T Consensus 71 ~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~---------~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg 141 (321)
T cd05591 71 LFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALM---------FLHRHGVIYRDLKLDNILLDAEGHCKLADFG 141 (321)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccCCCHHHeEECCCCCEEEeecc
Confidence 3578888888888765443223333333334333 66666 8899999999999999999 46778999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+...... .......+++.|+|||++.+ ..|+..+|+||+|++++++++|+.||.+....+....+...... .+...
T Consensus 142 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~-~p~~~ 219 (321)
T cd05591 142 MCKEGILNGVTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL-YPVWL 219 (321)
T ss_pred cceecccCCccccccccCccccCHHHHcC-CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-CCCCC
Confidence 88754321 12234567888999999863 44788999999999999999999999988877776666553222 22334
Q ss_pred cchhhhhhhhccccCCCCCc
Q 026720 206 PLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~ 225 (234)
+..+..+...+...++.+|+
T Consensus 220 ~~~~~~ll~~~L~~dp~~R~ 239 (321)
T cd05591 220 SKEAVSILKAFMTKNPNKRL 239 (321)
T ss_pred CHHHHHHHHHHhccCHHHcC
Confidence 55666677777777888887
No 79
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.62 E-value=4.7e-16 Score=128.51 Aligned_cols=137 Identities=32% Similarity=0.495 Sum_probs=105.3
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|.|+++ .....+++|||.+....... ......+++.|++||.+.+...|+...|+||+||+++|
T Consensus 118 ~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e 197 (372)
T cd07853 118 YLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAE 197 (372)
T ss_pred HHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHH
Confidence 8899999999999999999 45678999999887643221 12234567889999998766668899999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhCCCCCC-------------------------------CCcchhhhhhhhccccCCC
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIGSPTKD-------------------------------SWPLGIQLASNLNWKLPQM 222 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~ 222 (234)
+++|+.||.+....+++..+.+..+.|... ..++....+...+...++.
T Consensus 198 l~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~ 277 (372)
T cd07853 198 LLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPD 277 (372)
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChh
Confidence 999999999988888777776654433221 1233444566667788999
Q ss_pred CCccccccCCC
Q 026720 223 GGVNLLAVMPS 233 (234)
Q Consensus 223 ~~~~~~~~~~~ 233 (234)
+|+++.+++.+
T Consensus 278 ~R~t~~e~l~h 288 (372)
T cd07853 278 KRISAADALAH 288 (372)
T ss_pred hCcCHHHHhcC
Confidence 99999988764
No 80
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.62 E-value=2.5e-16 Score=130.38 Aligned_cols=175 Identities=23% Similarity=0.341 Sum_probs=118.5
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
+..+|..|+..|++.+...-...+++..+..|... +.|+. ++|+.+++|++++|+|+++ .....++.||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~---------~LH~~givHrDlkp~NIll~~~~~~kl~Df 145 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIE---------AVHKLGFIHRDIKPDNILIDRGGHIKLSDF 145 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCHHHEEECCCCCEEEeec
Confidence 45678889999998876554444444444445444 67777 8999999999999999999 4677899999
Q ss_pred cccccccCCCC------------------------------------------------CCCcccCcccccccccccccC
Q 026720 126 GMVKEIDSNLP------------------------------------------------CTDYVTTRWYRGPEVLLFSEI 157 (234)
Q Consensus 126 ~~a~~~~~~~~------------------------------------------------~~~~~~~~~~~~pe~~~~~~~ 157 (234)
|.++....... ....++++.|+|||++. ...
T Consensus 146 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~ 224 (377)
T cd05629 146 GLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL-QQG 224 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc-cCC
Confidence 98864321000 00135788899999986 345
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh---hCCCCCCCCcchhhhhhhhccccCCC--CCccccccCC
Q 026720 158 YGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL---IGSPTKDSWPLGIQLASNLNWKLPQM--GGVNLLAVMP 232 (234)
Q Consensus 158 ~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 232 (234)
|+..+|+||+||+++|+++|.+||.+....+....+... ...|+....+.....+...+...|+. .|++..+++.
T Consensus 225 ~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 225 YGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITNAENRLGRGGAHEIKS 304 (377)
T ss_pred CCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhcCHhhcCCCCCHHHHhc
Confidence 789999999999999999999999987776666665542 22233333444444444333333332 2556666654
No 81
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.62 E-value=5.2e-16 Score=126.09 Aligned_cols=168 Identities=25% Similarity=0.285 Sum_probs=118.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|++.....--..+++..+..|... +.|+. ++|+.+++|++++|.|+++ .....+++|||.
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~---------~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~ 142 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALN---------FLHERGIIYRDLKLDNVLLDADGHIKLTDYGM 142 (327)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccCCCHHHEEEeCCCCEEEecccc
Confidence 578888998988765433233444444455444 66777 8999999999999999999 467789999998
Q ss_pred cccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHhhCCC
Q 026720 128 VKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGK------SSADQIYKICQLIGSP 200 (234)
Q Consensus 128 a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~------~~~~~~~~i~~~~~~~ 200 (234)
+..... ........+++.|+|||++.+ ..++..+|+||+|++++++++|..||... ...+...+.......+
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (327)
T cd05617 143 CKEGLGPGDTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR 221 (327)
T ss_pred ceeccCCCCceecccCCcccCCHHHHCC-CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC
Confidence 875322 122334567889999999864 45788999999999999999999999632 2333333433332333
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccc
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
.+...+.....+...+...++.+|++.
T Consensus 222 ~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 222 IPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 344555666777777777778888764
No 82
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.62 E-value=5.3e-16 Score=126.14 Aligned_cols=168 Identities=24% Similarity=0.284 Sum_probs=116.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.....--..+++..+..|... +.|+. ++|..+++|++++|+|+++ .....+++|||
T Consensus 71 ~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg 141 (329)
T cd05588 71 LFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALN---------FLHERGIIYRDLKLDNVLLDAEGHIKLTDYG 141 (329)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEecCCCHHHeEECCCCCEEECcCc
Confidence 3688889999988665433233444455555544 66777 8999999999999999999 46678999999
Q ss_pred ccccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHHhh
Q 026720 127 MVKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS--------SADQIYKICQLI 197 (234)
Q Consensus 127 ~a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~--------~~~~~~~i~~~~ 197 (234)
.+..... ........++..|++||++.+ ..++..+|+||+|++++++++|+.||+..+ ..+...+.....
T Consensus 142 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 220 (329)
T cd05588 142 MCKEGIRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK 220 (329)
T ss_pred cccccccCCCccccccCCccccCHHHHcC-CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC
Confidence 8875322 112334567889999999874 457889999999999999999999996321 222232322222
Q ss_pred CCCCCCCCcchhhhhhhhccccCCCCCcc
Q 026720 198 GSPTKDSWPLGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (234)
...-+...+..+..+.+.+....+.+|++
T Consensus 221 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~ 249 (329)
T cd05588 221 QIRIPRSLSVKASSVLKGFLNKDPKERLG 249 (329)
T ss_pred CCCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 22223445556677777788888888876
No 83
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.62 E-value=5.9e-16 Score=128.31 Aligned_cols=175 Identities=24% Similarity=0.352 Sum_probs=119.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.++.+|+..|++.+...-...+++..+..|... +.|+. ++|..+++|+|++|.|+++ .....++.|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~---------~LH~~givHrDlKp~Nili~~~~~~kL~DFG 146 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIE---------SVHKMGFIHRDIKPDNILIDLDGHIKLTDFG 146 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeecCCcHHHEEECCCCCEEEeeCc
Confidence 4578889999998877654444444444444443 66666 8999999999999999999 46678999999
Q ss_pred ccccccCCC------------------------------------------------CCCCcccCcccccccccccccCC
Q 026720 127 MVKEIDSNL------------------------------------------------PCTDYVTTRWYRGPEVLLFSEIY 158 (234)
Q Consensus 127 ~a~~~~~~~------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~ 158 (234)
.+..+.... .....++++.|+|||++.+ ..|
T Consensus 147 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~ 225 (381)
T cd05626 147 LCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGY 225 (381)
T ss_pred CCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-CCC
Confidence 865321000 0113467889999999864 447
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC---CCCCCCCc-chhhhhhhhcc-ccCCCCCccccccCCC
Q 026720 159 GPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG---SPTKDSWP-LGIQLASNLNW-KLPQMGGVNLLAVMPS 233 (234)
Q Consensus 159 ~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~---~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (234)
+..+|+||+||+++|+++|..||.+....+...++..... .|.....+ +..+.+.+++. ...+..|+++++++.+
T Consensus 226 ~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 226 TQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred CCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 8999999999999999999999998877666666654222 22222223 34444445433 3334458888887653
No 84
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.62 E-value=1.1e-15 Score=121.38 Aligned_cols=137 Identities=36% Similarity=0.677 Sum_probs=106.8
Q ss_pred HhhhcccccCCcCCCcEEeeCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh
Q 026720 97 SLHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS 176 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~ 176 (234)
++|..+++|++++|+++.+.....++.++|.+..+..........++..|.+||.......++...|+||+|++++|+++
T Consensus 115 ~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~ 194 (282)
T cd07831 115 HMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS 194 (282)
T ss_pred HHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHc
Confidence 88999999999999999996578899999998877654444445667889999987544556889999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHhhCCCCC----------------------------CCCcchhhhhhhhccccCCCCCcccc
Q 026720 177 FGILFPGKSSADQIYKICQLIGSPTK----------------------------DSWPLGIQLASNLNWKLPQMGGVNLL 228 (234)
Q Consensus 177 ~~~~f~~~~~~~~~~~i~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (234)
|.+||++....+....+.+..+.+.. ...+..+..++..++...+.+|++++
T Consensus 195 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 274 (282)
T cd07831 195 LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAK 274 (282)
T ss_pred CCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHH
Confidence 99999988776666555544433222 12245666677778888999999999
Q ss_pred ccCCC
Q 026720 229 AVMPS 233 (234)
Q Consensus 229 ~~~~~ 233 (234)
+++.+
T Consensus 275 ~~l~~ 279 (282)
T cd07831 275 QALRH 279 (282)
T ss_pred HHhhC
Confidence 98864
No 85
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.62 E-value=1.9e-16 Score=141.06 Aligned_cols=176 Identities=21% Similarity=0.287 Sum_probs=132.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+.+.||+.|.+.+..+.-...++--..-|+.+ +.|.+ ++|.++++|++++|.|+++ ..+..+++|||
T Consensus 1309 v~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla---------~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1309 VYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLA---------YLHEHGIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHH---------HHHhcCceecCCCccceeeecCCcEEeeccc
Confidence 3578899999999998776433333333455555 88999 9999999999999999999 46789999999
Q ss_pred ccccccCCC-----CCCCcccCccccccccccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHhhC
Q 026720 127 MVKEIDSNL-----PCTDYVTTRWYRGPEVLLFSE--IYGPEVDKWAMGAIMFEMLSFGILFPGK-SSADQIYKICQLIG 198 (234)
Q Consensus 127 ~a~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~--~~~~~~d~~s~g~~l~e~~~~~~~f~~~-~~~~~~~~i~~~~~ 198 (234)
.|..+.... ......|++.|+|||++++.. ....+.|+||+||++.||++|+.|+... ..|.+-+++-....
T Consensus 1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~ 1459 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK 1459 (1509)
T ss_pred ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC
Confidence 999876542 134578999999999998644 2457889999999999999999999964 56777777754433
Q ss_pred CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+-+..-+.+=..+..-|...++.+|-+..+++++
T Consensus 1460 Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 33344444444445666888888888766556543
No 86
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1.2e-15 Score=135.55 Aligned_cols=180 Identities=18% Similarity=0.267 Sum_probs=139.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhc-cCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~-~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|.+|+..|+|..-++--+.-+ .+...+---+|....+..++.+ +|.+...+|+|+...|.++ ....++++|||+
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~--YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMN--YLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhH--HHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 57789999999987655321111 1233444455555555555555 7777778999999999999 467889999999
Q ss_pred cccccCCCCC--CCc-ccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 128 VKEIDSNLPC--TDY-VTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 128 a~~~~~~~~~--~~~-~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
|+.+...-.. .+. .....|++||.+.. ..|++++|+||+|+++||+++ |..||++..+.+...-+.+...-+.+.
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~ 927 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPS 927 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhh-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCC
Confidence 9976553211 111 23346899999974 568999999999999999997 669999999999998888877778889
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+++.+=.++.-||+..+.+|++|..|++
T Consensus 928 ~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 928 YCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 99999999999999999999999999875
No 87
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.62 E-value=4.7e-16 Score=126.41 Aligned_cols=173 Identities=23% Similarity=0.272 Sum_probs=119.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+.....--..+.+..+..+.. ++.|+. ++|..+++|++++|.|+++ .....+++|||
T Consensus 70 ~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~---------~LH~~~ivHrDikp~NIll~~~~~~kL~DfG 140 (328)
T cd05593 70 LCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALD---------YLHSGKIVYRDLKLENLMLDKDGHIKITDFG 140 (328)
T ss_pred EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeEecccCHHHeEECCCCcEEEecCc
Confidence 357788888888865543222233333333433 366666 8999999999999999999 46678999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+...... .......+++.|++||++.+ ..++...|+||+|++++++++|+.||.+.........+... ..+-+...
T Consensus 141 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~-~~~~p~~~ 218 (328)
T cd05593 141 LCKEGITDAATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME-DIKFPRTL 218 (328)
T ss_pred CCccCCCcccccccccCCcCccChhhhcC-CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC-CccCCCCC
Confidence 88764321 12233567889999999864 44789999999999999999999999887665554444322 11223345
Q ss_pred cchhhhhhhhccccCCCCCc-----cccccCC
Q 026720 206 PLGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
+..+..+.+.+...++.+|+ ++.+++.
T Consensus 219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 219 SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 55666677767777777775 6666654
No 88
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.62 E-value=4.6e-16 Score=128.18 Aligned_cols=173 Identities=25% Similarity=0.340 Sum_probs=118.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.+|..|+..|++.+...--..+++..+..|... +.|+. ++|+.+++|++++|.|+++ ..+..++.|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~---------~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAID---------SIHKLGYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEeccCCHHHeEECCCCCEEEeecc
Confidence 4577788888888776543223344445555544 67777 8999999999999999999 46778999999
Q ss_pred ccccccCCC---------------------------------------CCCCcccCcccccccccccccCCCCcchHHHH
Q 026720 127 MVKEIDSNL---------------------------------------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAM 167 (234)
Q Consensus 127 ~a~~~~~~~---------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~ 167 (234)
.+..+.... .....++++.|+|||++.. ..|+..+|+||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSl 225 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSL 225 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC-CCCCCeeeeecc
Confidence 887543211 0012357889999999863 447899999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHhh---CCCCCCCCcchhhhhhhhccccCCCCCcc---ccccCC
Q 026720 168 GAIMFEMLSFGILFPGKSSADQIYKICQLI---GSPTKDSWPLGIQLASNLNWKLPQMGGVN---LLAVMP 232 (234)
Q Consensus 168 g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 232 (234)
||+++|+++|..||.+....+...++.+.. ..|....++.....++..+.. .+.+|++ +++++.
T Consensus 226 G~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 226 GVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred hhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999999999999999887776666555422 223333444455555443333 4556665 666554
No 89
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.62 E-value=1.9e-15 Score=122.09 Aligned_cols=137 Identities=31% Similarity=0.536 Sum_probs=103.1
Q ss_pred HhhhcccccCCcCCCcEEee-----CCeeeEeeccccccccCCC----CCCCcccCcccccccccccccCCCCcchHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-----KGVIKIGDLGMVKEIDSNL----PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAM 167 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-----~~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~ 167 (234)
++|+.+++|+|++|.|+++. ....+++|||.+....... ......+++.|+|||++.+...|+..+|+||+
T Consensus 123 ~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 202 (317)
T cd07868 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI 202 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHH
Confidence 88999999999999999982 3468999999987654322 12345678889999998766668899999999
Q ss_pred HHHHHHHHhCCCCCCCCC---------hHHHHHHHHHhhCCCCCCCCcc-------------------------------
Q 026720 168 GAIMFEMLSFGILFPGKS---------SADQIYKICQLIGSPTKDSWPL------------------------------- 207 (234)
Q Consensus 168 g~~l~e~~~~~~~f~~~~---------~~~~~~~i~~~~~~~~~~~~~~------------------------------- 207 (234)
|++++++++|++||.+.. ..+++.++++.++.|....|+.
T Consensus 203 G~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (317)
T cd07868 203 GCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKH 282 (317)
T ss_pred HHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhc
Confidence 999999999999997543 2456666777666655444432
Q ss_pred ------hhhhhhhhccccCCCCCccccccCCC
Q 026720 208 ------GIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 208 ------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
....+...+...++.+|+|+++++++
T Consensus 283 ~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 283 KVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 12234555667789999999998864
No 90
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.61 E-value=2.5e-15 Score=119.34 Aligned_cols=137 Identities=46% Similarity=0.830 Sum_probs=110.2
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..++.|++++|+++++. ....++.+++.+.............++..|.+||.+.....++...|+||+|+++++++
T Consensus 114 ~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~ 193 (283)
T cd07830 114 HIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELY 193 (283)
T ss_pred HHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHH
Confidence 78888999999999999994 57789999999887765434444566778999998865555788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCCCCc-----------------------------chhhhhhhhccccCCCCCcc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKDSWP-----------------------------LGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~ 226 (234)
+|+++|++....+...++....+.+....|. ..+..+.+.|+..++.+|++
T Consensus 194 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt 273 (283)
T cd07830 194 TLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT 273 (283)
T ss_pred hCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC
Confidence 9999999998888888877766665543332 34556677788999999999
Q ss_pred ccccCCC
Q 026720 227 LLAVMPS 233 (234)
Q Consensus 227 ~~~~~~~ 233 (234)
+++++..
T Consensus 274 ~~ei~~~ 280 (283)
T cd07830 274 ASQALQH 280 (283)
T ss_pred HHHHhhC
Confidence 9998764
No 91
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.61 E-value=2.8e-15 Score=119.41 Aligned_cols=136 Identities=38% Similarity=0.600 Sum_probs=107.6
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|+.+++|++++|+|+++ .....++.|||.+.............++..|++||++.+ ..++..+|+||+|+++++++
T Consensus 123 ~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~ 201 (288)
T cd07863 123 FLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQ-STYATPVDMWSVGCIFAEMF 201 (288)
T ss_pred HHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhC-CCCCCcchhhhHHHHHHHHH
Confidence 8899999999999999999 466789999998877654333344566788999999864 34789999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCCCCc--------------------------chhhhhhhhccccCCCCCccccc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKDSWP--------------------------LGIQLASNLNWKLPQMGGVNLLA 229 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~ 229 (234)
+|.++|.+....+.+.++....+.+....|+ +....+...+...++.+|+++.+
T Consensus 202 ~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~ 281 (288)
T cd07863 202 RRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFR 281 (288)
T ss_pred hCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHH
Confidence 9999999988888888888877655544443 23345556667778999999998
Q ss_pred cCCC
Q 026720 230 VMPS 233 (234)
Q Consensus 230 ~~~~ 233 (234)
++.+
T Consensus 282 ~l~h 285 (288)
T cd07863 282 ALQH 285 (288)
T ss_pred HhcC
Confidence 8764
No 92
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.61 E-value=9.8e-16 Score=126.53 Aligned_cols=175 Identities=25% Similarity=0.351 Sum_probs=120.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.+...-. .+++..+..|.. ++.|+. ++|+.+++|++++|.|+++ ..+..+++|||
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~---------~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG 187 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALD---------AIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 187 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHH---------HHHHCCeeccCCCHHHEEEcCCCCEEEEecc
Confidence 45788899999887764321 123333333433 366666 8999999999999999999 46788999999
Q ss_pred ccccccCCC--CCCCcccCccccccccccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh---C
Q 026720 127 MVKEIDSNL--PCTDYVTTRWYRGPEVLLFSE---IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI---G 198 (234)
Q Consensus 127 ~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~---~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~---~ 198 (234)
.+....... ......+++.|+|||++.... .++..+|+||+|++++|+++|+.||.+........++.... .
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~ 267 (370)
T cd05596 188 TCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT 267 (370)
T ss_pred ceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC
Confidence 988764321 223456888999999985422 36789999999999999999999999887766666665432 2
Q ss_pred CCCCCCCcchhhhhhhhccccCCCC--CccccccCCC
Q 026720 199 SPTKDSWPLGIQLASNLNWKLPQMG--GVNLLAVMPS 233 (234)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 233 (234)
.|+....+.....++..+...++.. |+++++++++
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 268 FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 2333334455555554444333333 7888888653
No 93
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.61 E-value=2e-16 Score=124.30 Aligned_cols=173 Identities=24% Similarity=0.359 Sum_probs=123.4
Q ss_pred HHHHHHhhcCChHHHHHHH--HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~--~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.+|..|+..|.+.+...-. ..++......|... +.|+. ++|+..++|+++.|.++++. ....+++++
T Consensus 77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~---------~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f 147 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALS---------YLHSNNIIHGNLSPSNILLDSNGQVKLSDF 147 (259)
T ss_dssp EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHH---------HHHHTTEEEST-SGGGEEEETTTEEEEEST
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccc
Confidence 5677889989888875543 22222233333333 55555 78888899999999999995 678899999
Q ss_pred cccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 126 GMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 126 ~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
+......... ..........|.+||.+.... ++...|+||+|+++||+++ ++.||.+....+...++.+....+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T PF07714_consen 148 GLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPI 226 (259)
T ss_dssp TTGEETTTSSSEEESTTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTS
T ss_pred cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccee
Confidence 9888762211 112233455688999986443 7899999999999999999 6799998877777777755555555
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+..++..+..+...||...+.+||+|.+++.
T Consensus 227 ~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 227 PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp BTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 6778889999999999999999999999864
No 94
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.61 E-value=1.1e-15 Score=123.58 Aligned_cols=171 Identities=24% Similarity=0.280 Sum_probs=120.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.+..+--..++.+.+..|... +.|+. ++|+.+++|++++|+|+++ .....+++|||
T Consensus 71 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~---------~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05619 71 LFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQ---------FLHSKGIVYRDLKLDNILLDTDGHIKIADFG 141 (316)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeEeCCCCHHHEEECCCCCEEEccCC
Confidence 3477888988988766543222333333334333 66666 8899999999999999999 45678999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+...... .......++..|++||++.+ ..++..+|+||+|++++|+++|+.||.+....+....+... ....+..+
T Consensus 142 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~-~~~~~~~~ 219 (316)
T cd05619 142 MCKENMLGDAKTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD-NPCYPRWL 219 (316)
T ss_pred cceECCCCCCceeeecCCccccCHHHHcC-CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCccC
Confidence 88754221 12234567888999999864 44789999999999999999999999987765555444322 22223345
Q ss_pred cchhhhhhhhccccCCCCCcccc-cc
Q 026720 206 PLGIQLASNLNWKLPQMGGVNLL-AV 230 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~-~~ 230 (234)
+..+..+...++...+.+|+++. ++
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 220 TREAKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCCChHHH
Confidence 66677777778888888888886 44
No 95
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.61 E-value=2.3e-15 Score=117.71 Aligned_cols=174 Identities=25% Similarity=0.374 Sum_probs=130.4
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee--CCeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS--KGVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~--~~~~~~~~ 124 (234)
.+|..|+..|.+.+...-.. .+++..+..+.. ++.++. ++|+.++.|++++|.++++. ....++.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lh~~~i~h~dl~~~nil~~~~~~~~~l~d 145 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH---------HVHTKLILHRDLKTQNILLDKHKMVVKIGD 145 (256)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEEcCCCCEEEEcc
Confidence 46666777788776654321 122233333333 366666 88988999999999999994 34678999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
++.+.............++..|++||...+ ..++...|+||+|++++++++|+.||.+........++......+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd08220 146 FGISKILSSKSKAYTVVGTPCYISPELCEG-KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDR 224 (256)
T ss_pred CCCceecCCCccccccccCCcccCchhccC-CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCC
Confidence 999887765444444567788999999864 3467889999999999999999999998877776666665544445556
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
++..+..+...|+..++.+|+++++++.+
T Consensus 225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 225 YSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 77788888899999999999999999864
No 96
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.61 E-value=8.7e-16 Score=122.03 Aligned_cols=135 Identities=22% Similarity=0.310 Sum_probs=106.4
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..++.|++++|.|+++ .....++.+||.+....... ......++..|+|||.... ..++...|+||+|++++
T Consensus 139 ~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~il~ 217 (283)
T cd05048 139 YLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESDIWSFGVVLW 217 (283)
T ss_pred HHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhhHHHHHHHHH
Confidence 7888899999999999999 45678999999887654321 1122344567999998764 34788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||.+....+....+......+.+...+..+..+...||...+.+|+++.+|++
T Consensus 218 el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~ 278 (283)
T cd05048 218 EIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHT 278 (283)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9997 99999987776665555554444555677889999999999999999999998865
No 97
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.61 E-value=1.9e-15 Score=120.14 Aligned_cols=175 Identities=29% Similarity=0.474 Sum_probs=123.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.++........++...+..+... +.++. ++|..+++|++++|.++++ .....++.++|.
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~---------~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVN---------FCHKHNCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCceecCCChhhEEEcCCCcEEECcccc
Confidence 466677777777665433222333333444443 55665 8898899999999999999 467789999998
Q ss_pred cccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC-------
Q 026720 128 VKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS------- 199 (234)
Q Consensus 128 a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~------- 199 (234)
+..+.... ......++..|.+||.+.+...++...|+||+|++++++++|++||++....+.+..+....+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07847 147 ARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 226 (286)
T ss_pred ceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 88765432 2233456678999999865556788999999999999999999999988877766554432211
Q ss_pred -------------CCC----------CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 -------------PTK----------DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 -------------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
|+. ...+..+..+...|+..++.+|+++.+++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred hcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 111 1223445567777899999999999998864
No 98
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.61 E-value=2.4e-16 Score=128.18 Aligned_cols=175 Identities=26% Similarity=0.339 Sum_probs=125.4
Q ss_pred HHHHHHHhhcCChHHHHHHH-HhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..+|..|+..|.+.+..+-. ..+++..+..|.. ++.|+. ++|..+++|++++|.|+++ ..+..+++||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~---------~lH~~~i~H~Dlkp~NIll~~~~~~kL~Df 146 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIH---------SVHQMGYVHRDIKPENVLIDRTGHIKLADF 146 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEcccCchHheEECCCCCEEeccC
Confidence 45788889899888765443 2233333333433 366666 8899999999999999999 4577899999
Q ss_pred cccccccCCCC--CCCcccCccccccccccc-----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLF-----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG 198 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~-----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~ 198 (234)
|.+..+..... .....+++.|++||++.. ...++...|+||+|++++|+++|..||.+........++.....
T Consensus 147 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~ 226 (330)
T cd05601 147 GSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR 226 (330)
T ss_pred CCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence 99887643221 122357788999999853 23467899999999999999999999998877666666654322
Q ss_pred ---CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 ---SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.|+....+..+..+.+.+.. .+.+|+++++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 23333456666777666666 77899999988764
No 99
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.61 E-value=1.5e-15 Score=120.46 Aligned_cols=175 Identities=19% Similarity=0.222 Sum_probs=121.5
Q ss_pred HHHHHHHHhhcCChHHHHHHHHh--hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
+..+|..|+..|.+.....-... .....+..+... +.|+. ++|+.+++|++++|.|+++ .....++.
T Consensus 67 ~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~ivH~dikp~Nili~~~~~~~l~ 137 (277)
T cd05607 67 HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGIL---------HLHSMDIVYRDMKPENVLLDDQGNCRLS 137 (277)
T ss_pred eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHH---------HHHHCCEEEccCChHhEEEcCCCCEEEe
Confidence 35688889988888765432211 111222333332 55555 8899999999999999999 45678999
Q ss_pred eccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC----C
Q 026720 124 DLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG----S 199 (234)
Q Consensus 124 ~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~----~ 199 (234)
|||.+.............++..|.+||++.+.. ++..+|+||+|++++++++|+.||.+.........+.+... .
T Consensus 138 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 216 (277)
T cd05607 138 DLGLAVELKDGKTITQRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK 216 (277)
T ss_pred eceeeeecCCCceeeccCCCCCccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc
Confidence 999887765433333446778899999987544 88999999999999999999999986533222222222211 1
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
......+..+..+...++..++.+|++..+++.
T Consensus 217 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 217 FEHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred cccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 222356777888888899999999999976553
No 100
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.61 E-value=1.5e-15 Score=120.95 Aligned_cols=174 Identities=22% Similarity=0.265 Sum_probs=124.9
Q ss_pred HHHHHHHhhcCChHHHHHHH--HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~--~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++..|+..|++.+..... ..++++.+..+... +.|+. ++|+.+++|++++|.|+++ ....+++.|
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~ivH~dlkp~Nil~~~~~~~~l~D 145 (285)
T cd05605 75 LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLE---------DLHRERIVYRDLKPENILLDDYGHIRISD 145 (285)
T ss_pred EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH---------HHHHCCcEecCCCHHHEEECCCCCEEEee
Confidence 56888899999987654321 12333344444443 66666 8999999999999999999 456789999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC---CCC
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG---SPT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~---~~~ 201 (234)
||.+.............++..|++||.+.. ..++...|+||+|++++++++|..||.+.........+..... ...
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd05605 146 LGLAVEIPEGETIRGRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEY 224 (285)
T ss_pred CCCceecCCCCccccccCCCCccCcHHhcC-CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccccc
Confidence 998887644333334567788999999864 3478889999999999999999999998765443333322221 122
Q ss_pred CCCCcchhhhhhhhccccCCCCCc-----cccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
....+..+..+...++..++.+|+ ++++++.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 234567788888999999999999 6667754
No 101
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.60 E-value=7.2e-16 Score=127.85 Aligned_cols=172 Identities=24% Similarity=0.353 Sum_probs=115.3
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.+|..|+..|++.+...-...+++..+..|... +.|+. ++|..+++|++++|+|+++ ..+..++.|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~---------~lH~~~ivHrDlKp~NILl~~~g~~kL~DFG 146 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVE---------SVHKMGFIHRDIKPDNILIDRDGHIKLTDFG 146 (382)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEECCCCCEEEeECC
Confidence 3678889999988776543222333334444443 66666 8899999999999999999 46778999999
Q ss_pred ccccccCC------------------------------------------------CCCCCcccCcccccccccccccCC
Q 026720 127 MVKEIDSN------------------------------------------------LPCTDYVTTRWYRGPEVLLFSEIY 158 (234)
Q Consensus 127 ~a~~~~~~------------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~ 158 (234)
.+..+... ......++++.|+|||++.+ ..|
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~ 225 (382)
T cd05625 147 LCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGY 225 (382)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-CCC
Confidence 87532100 00112467888999999864 458
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC---CCCCCCC-cchhhhhhhhccccCCCCCcc---ccccC
Q 026720 159 GPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG---SPTKDSW-PLGIQLASNLNWKLPQMGGVN---LLAVM 231 (234)
Q Consensus 159 ~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~ 231 (234)
+..+|+||+||+++||++|.+||.+....+...++..... .|..... ++..+.+.+++. .+.+|++ +++++
T Consensus 226 ~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~--~p~~R~~~~~~~ei~ 303 (382)
T cd05625 226 TQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCR--GPEDRLGKNGADEIK 303 (382)
T ss_pred CCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHcc--CHhHcCCCCCHHHHh
Confidence 8999999999999999999999998877766666654322 2222222 334444555543 4455554 55554
Q ss_pred C
Q 026720 232 P 232 (234)
Q Consensus 232 ~ 232 (234)
.
T Consensus 304 ~ 304 (382)
T cd05625 304 A 304 (382)
T ss_pred c
Confidence 3
No 102
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.60 E-value=8.9e-16 Score=127.99 Aligned_cols=171 Identities=25% Similarity=0.322 Sum_probs=142.4
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhc--ccccCCcCCCcEEee--CCeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQ--GYFHRDLKPSNLLVS--KGVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~--~~~~~~l~p~~~~~~--~~~~~~~~ 124 (234)
.+|.+++-+|.|..-++-+.++.-+-+..|..+ +.|+. +||.+ .++|++++-||+.++ .+-.+++|
T Consensus 119 n~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~---------yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGD 189 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLV---------YLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGD 189 (632)
T ss_pred eeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhh---------hhhcCCCCccccccccceEEEcCCcCceeecc
Confidence 467889999999999998988887888999999 88988 88854 799999999999994 56789999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+|+|.......... .+|||-++|||..- .+|+.++|+||+|.+++||+++.-||+.+.+.-+.++-.-....|..-.
T Consensus 190 LGLAtl~r~s~aks-vIGTPEFMAPEmYE--E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~ 266 (632)
T KOG0584|consen 190 LGLATLLRKSHAKS-VIGTPEFMAPEMYE--ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALS 266 (632)
T ss_pred hhHHHHhhccccce-eccCccccChHHHh--hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhh
Confidence 99999876543333 79999999999874 7799999999999999999999999999999998888766555555422
Q ss_pred C--cchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 W--PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. .-..+.++..|... ...|++..+++.+
T Consensus 267 kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 267 KVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 2 23566777888877 8899999988865
No 103
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.60 E-value=1.3e-15 Score=123.64 Aligned_cols=172 Identities=24% Similarity=0.293 Sum_probs=118.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.+...-...+.+..+..+.. ++.|+. ++|+.+++|++++|.|+++ .....+++|||.
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 146 (323)
T cd05584 76 YLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALE---------HLHQQGIIYRDLKPENILLDAQGHVKLTDFGL 146 (323)
T ss_pred EEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHeEECCCCCEEEeeCcC
Confidence 46667777777755432211122222233333 356666 8899999999999999999 467789999998
Q ss_pred cccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
++...... ......+++.|++||.+.+ ..++..+|+||+|++++|+++|+.||.+........++..... .-+...+
T Consensus 147 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~-~~~~~~~ 224 (323)
T cd05584 147 CKESIHEGTVTHTFCGTIEYMAPEILMR-SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-NLPPYLT 224 (323)
T ss_pred CeecccCCCcccccCCCccccChhhccC-CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CCCCCCC
Confidence 87543322 2234567889999999864 3467899999999999999999999998877766666654322 2223345
Q ss_pred chhhhhhhhccccCCCCCc-----cccccCC
Q 026720 207 LGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
..+..+.+.++...+.+|+ +.+++++
T Consensus 225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 5667777778877777887 5555543
No 104
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.60 E-value=1.1e-15 Score=124.33 Aligned_cols=169 Identities=25% Similarity=0.291 Sum_probs=115.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.....--..+++..+..|... +.|+. ++|..+++|++++|.|+++ .....+++|||
T Consensus 71 ~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~---------~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG 141 (329)
T cd05618 71 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---------YLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 141 (329)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeeCCCCHHHEEECCCCCEEEeeCC
Confidence 3577888998988665432223333344444444 66666 8899999999999999999 46778999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHHhh
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGK--------SSADQIYKICQLI 197 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~--------~~~~~~~~i~~~~ 197 (234)
.+...... .......+++.|++||++.+ ..++..+|+||+|++++++++|+.||... ...+...+.....
T Consensus 142 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~ 220 (329)
T cd05618 142 MCKEGLRPGDTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 220 (329)
T ss_pred ccccccCCCCccccccCCccccCHHHHcC-CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC
Confidence 88764321 12334567889999999874 44788999999999999999999999632 1122222222221
Q ss_pred CCCCCCCCcchhhhhhhhccccCCCCCccc
Q 026720 198 GSPTKDSWPLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
...-+...+..+..+.+.++..++.+|++.
T Consensus 221 ~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 221 QIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 222233445566677777888888888873
No 105
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.60 E-value=2.2e-15 Score=120.71 Aligned_cols=135 Identities=20% Similarity=0.272 Sum_probs=103.0
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|+.+++|++++|+|+++ .+...++.+||.+..............+..|++||...+ ..++..+|+||+|++++||+
T Consensus 134 ~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~il~el~ 212 (297)
T cd05089 134 YLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY-SVYTTKSDVWSFGVLLWEIV 212 (297)
T ss_pred HHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhcc-CCCCchhhHHHHHHHHHHHH
Confidence 8899999999999999999 456778999998765332111111122345899998864 34788999999999999999
Q ss_pred h-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 176 S-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 176 ~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+ |..||.+....+...++.+....+.+..++..+..+...|+...+.+|+++++++.
T Consensus 213 t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 213 SLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred cCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 7 99999887776666655554444445567778888999999999999999998854
No 106
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.60 E-value=4.5e-15 Score=122.11 Aligned_cols=134 Identities=36% Similarity=0.572 Sum_probs=103.4
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|+.+++|++++|.|+++ ..+..+++|||.+.............+++.|++||.+.+ ..++..+|+||+|+++++++
T Consensus 138 ~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~ 216 (359)
T cd07876 138 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGELV 216 (359)
T ss_pred HHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccC-CCCCcchhhHHHHHHHHHHH
Confidence 8999999999999999999 467889999999887654433444567888999999874 44788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccC
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
+|+.||.+....+....+.+..+.|....++.......++....|.....++.+++
T Consensus 217 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (359)
T cd07876 217 KGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELF 272 (359)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhc
Confidence 99999999988888888888888777655544433344444445555555554443
No 107
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.60 E-value=1.4e-15 Score=125.63 Aligned_cols=175 Identities=25% Similarity=0.361 Sum_probs=119.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.+|..|+..|++.+...-. .+++..+..+... +.|+. ++|+.+++|++++|.|+++ .....+++|||
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~---------~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALD---------AIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHH---------HHHHCCEEeCCCCHHHEEECCCCCEEEEeCC
Confidence 45778889999887765321 2333333334433 66666 8899999999999999999 46778999999
Q ss_pred ccccccCCC--CCCCcccCcccccccccccc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC---
Q 026720 127 MVKEIDSNL--PCTDYVTTRWYRGPEVLLFS---EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG--- 198 (234)
Q Consensus 127 ~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~---~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~--- 198 (234)
.+..+.... ......+++.|+|||++... ..++..+|+||+|++++||++|..||.+........++.....
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~ 267 (371)
T cd05622 188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT 267 (371)
T ss_pred ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc
Confidence 988764321 22345688999999998642 2378899999999999999999999998877666666654322
Q ss_pred CCCCCCCcchhhhhhhhccccCCC--CCccccccCCC
Q 026720 199 SPTKDSWPLGIQLASNLNWKLPQM--GGVNLLAVMPS 233 (234)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 233 (234)
.|+....+.....++..+..-|+. .|+++++++++
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 268 FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 233334444555554443332322 36677776653
No 108
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.60 E-value=5.8e-15 Score=120.69 Aligned_cols=148 Identities=32% Similarity=0.536 Sum_probs=111.9
Q ss_pred ccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCccccccccc
Q 026720 75 NLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVL 152 (234)
Q Consensus 75 ~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~ 152 (234)
.+..+... +.|+. ++|..+++|++++|.|+++ .....++.|||.+...... .....+++.|++||++
T Consensus 119 ~~~~i~~qi~~aL~---------~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~ 187 (343)
T cd07878 119 HVQFLIYQLLRGLK---------YIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE--MTGYVATRWYRAPEIM 187 (343)
T ss_pred HHHHHHHHHHHHHH---------HHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC--cCCccccccccCchHh
Confidence 33334333 66666 8899999999999999999 4667899999998876543 3345678899999998
Q ss_pred ccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC----------------------------
Q 026720 153 LFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS---------------------------- 204 (234)
Q Consensus 153 ~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~---------------------------- 204 (234)
.+...++..+|+||+|++++++++|..||++....+.+.++.+..+.+....
T Consensus 188 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T cd07878 188 LNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIF 267 (343)
T ss_pred cCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhc
Confidence 7555688999999999999999999999998887777777766554433211
Q ss_pred --CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 --WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...+...++.+|+++.+++.+
T Consensus 268 ~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 268 RGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred cCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 12233455666778889999999988764
No 109
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.60 E-value=4.2e-15 Score=122.50 Aligned_cols=133 Identities=37% Similarity=0.596 Sum_probs=102.0
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|.|+++ .....+++|||.+.............+++.|+|||++.+ ..++..+|+||+|+++++++
T Consensus 141 ~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DiwSlG~il~ell 219 (364)
T cd07875 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 219 (364)
T ss_pred HHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhC-CCCCchhhHHhHHHHHHHHH
Confidence 8899899999999999999 467789999999987654433344577889999999874 44788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
+|+.||++....+...++.+..+.|.+..++..-..........|.....+++.+
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (364)
T cd07875 220 KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKL 274 (364)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhh
Confidence 9999999999999888888888877665444333333334444555555444443
No 110
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.60 E-value=1.2e-15 Score=126.00 Aligned_cols=175 Identities=26% Similarity=0.362 Sum_probs=118.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.+|..|+..|++.+...-. .+++..+..|... +.|+. ++|+.+++|++++|.|+++ .....+++|||
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~---------~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALD---------AIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHH---------HHHHCCeEecCCCHHHEEECCCCCEEEEecc
Confidence 45788889999988765422 2333333444443 66666 8899999999999999999 46788999999
Q ss_pred ccccccCCC--CCCCcccCccccccccccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC--
Q 026720 127 MVKEIDSNL--PCTDYVTTRWYRGPEVLLFSE---IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS-- 199 (234)
Q Consensus 127 ~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~---~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~-- 199 (234)
.+..+.... ......+++.|+|||++...+ .++..+|+||+|+++++|++|..||.+........++......
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~ 267 (370)
T cd05621 188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLN 267 (370)
T ss_pred cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccC
Confidence 988764321 223456889999999986432 3678999999999999999999999988776666666543222
Q ss_pred -CCCCCCcchhhhhhhhccccCC--CCCccccccCCC
Q 026720 200 -PTKDSWPLGIQLASNLNWKLPQ--MGGVNLLAVMPS 233 (234)
Q Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 233 (234)
|.....+.....+...+...++ ..|+++++++++
T Consensus 268 ~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 268 FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 2222233334444333322222 236777777653
No 111
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.60 E-value=1.7e-15 Score=124.26 Aligned_cols=175 Identities=27% Similarity=0.304 Sum_probs=138.4
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C----Ceee
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K----GVIK 121 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~----~~~~ 121 (234)
.-.+|.++|..|.+-+...-. ...+++......+ +.++. ++|..+++|++++|+|+++. . ...+
T Consensus 110 ~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~---------~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik 179 (382)
T KOG0032|consen 110 SVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVK---------YLHSLGVVHRDLKPENLLLASKDEGSGRIK 179 (382)
T ss_pred eEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHH---------HHHhCCceeccCCHHHeeeccccCCCCcEE
Confidence 346788888888877654332 2555666666555 66777 89999999999999999993 1 3689
Q ss_pred EeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 122 IGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 122 ~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
+.|||++......-.....++++.|+|||++.. ..|+..+|+||.|+++|.|+.|.+||.+.........|.+.--..+
T Consensus 180 ~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~-~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~ 258 (382)
T KOG0032|consen 180 LIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGG-RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFT 258 (382)
T ss_pred EeeCCCceEccCCceEeeecCCccccCchhhcC-CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCC
Confidence 999999998877555677899999999999963 4589999999999999999999999999998888888877666677
Q ss_pred CCCCcchhhhhh---hhccccCCCCCccccccCCC
Q 026720 202 KDSWPLGIQLAS---NLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 202 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 233 (234)
...|+..-..+. ......++..|.++.+++++
T Consensus 259 ~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 259 SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 777776554444 44556678999999887764
No 112
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.60 E-value=4.9e-15 Score=122.51 Aligned_cols=135 Identities=21% Similarity=0.350 Sum_probs=100.6
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.|+++. ....+++|||.+..+..... ......+..|++||++.. ..++..+|+||+|++++
T Consensus 227 yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlGvil~ 305 (374)
T cd05106 227 FLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYGILLW 305 (374)
T ss_pred HHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC-CCCCccccHHHHHHHHH
Confidence 78888999999999999994 56789999999876543211 111223456999999853 44789999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhh-CCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLI-GSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |+.||++........++.... ..+.+...+..+..++..|+...+.+||++++++.
T Consensus 306 ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 306 EIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9997 999998765544444444322 22223344677888889999999999999998764
No 113
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.60 E-value=1.1e-15 Score=123.99 Aligned_cols=168 Identities=24% Similarity=0.257 Sum_probs=118.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|.+|+..|.+.+...--..+.+..+..+.. ++.|+. ++|..+++|++++|.|+++ .....++.|||.
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~ 142 (325)
T cd05602 72 YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG---------YLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 142 (325)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEecCCCHHHeEECCCCCEEEccCCC
Confidence 56778888888876554322233333333333 367777 8999999999999999999 466789999998
Q ss_pred cccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+...... .......+++.|++||++.+ ..++..+|+||+|+++++|++|..||.+....+....+........ ...+
T Consensus 143 a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~ 220 (325)
T cd05602 143 CKENIEHNGTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK-PNIT 220 (325)
T ss_pred CcccccCCCCcccccCCccccCHHHHcC-CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC-CCCC
Confidence 8764321 12334567889999999874 4578899999999999999999999998777666555554322222 2345
Q ss_pred chhhhhhhhccccCCCCCcccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNLL 228 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~ 228 (234)
..+..+...+....+.+|++..
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAK 242 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCC
Confidence 5666666666666777777655
No 114
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.60 E-value=3.4e-15 Score=121.53 Aligned_cols=172 Identities=26% Similarity=0.359 Sum_probs=121.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhc-ccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQ-GYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~-~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|++.+...-...+++..+..+.. ++.|+. ++|.. +++|++++|.|+++ .....++.|||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 149 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA---------YLREKHQIMHRDVKPSNILVNSRGEIKLCDFG 149 (331)
T ss_pred EEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHhhcCCEEcCCCChhhEEEcCCCcEEEccCc
Confidence 57788899899987654333233333333333 355665 78864 48999999999999 45678999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh----------
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL---------- 196 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~---------- 196 (234)
.+..+.... .....++..|++||++.+ ..++...|+||+|++++|+++|+.||++....+. ..+...
T Consensus 150 ~~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 226 (331)
T cd06649 150 VSGQLIDSM-ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL-EAIFGRPVVDGEEGEP 226 (331)
T ss_pred ccccccccc-cccCCCCcCcCCHhHhcC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhcccccccccCCc
Confidence 987764432 234567889999999874 4478999999999999999999999986544332 111110
Q ss_pred ---------------------------------hC---CC--CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 197 ---------------------------------IG---SP--TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 197 ---------------------------------~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+. .+ +....+..+..++..|+...+.+|+++.+++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 227 HSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00 00 112345667788889999999999999999875
No 115
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.60 E-value=4.1e-16 Score=129.23 Aligned_cols=174 Identities=22% Similarity=0.291 Sum_probs=141.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV 128 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a 128 (234)
.+|.++|.+|.+++..+-+ ++.++....+.-+.+++++.+ ++|+..++|||+-..|.++. ....+++|||++
T Consensus 237 ~ivmEl~~gGsL~~~L~k~-----~~~v~~~ek~~~~~~AA~Gl~--YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKN-----KKSLPTLEKLRFCYDAARGLE--YLHSKNCIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred EEEEEecCCCcHHHHHHhC-----CCCCCHHHHHHHHHHHHhHHH--HHHHCCCcchhHhHHHheecCCCeEEeCccccc
Confidence 5788999999999986543 335666666777777777776 79988899999999999995 467799999998
Q ss_pred ccccCCCCCC-CcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH-HHhhCCCCCCCC
Q 026720 129 KEIDSNLPCT-DYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKI-CQLIGSPTKDSW 205 (234)
Q Consensus 129 ~~~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i-~~~~~~~~~~~~ 205 (234)
+.-....... .......|+|||.+.. ..|+.+.|+||+|+++||+.. |..||+|....+...+| .+....+.+..-
T Consensus 310 ~~~~~~~~~~~~~klPirWLAPEtl~~-~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~ 388 (474)
T KOG0194|consen 310 RAGSQYVMKKFLKKLPIRWLAPETLNT-GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKT 388 (474)
T ss_pred cCCcceeeccccccCcceecChhhhcc-CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCC
Confidence 8754221111 2233456899999974 479999999999999999997 77999999999999998 567777777788
Q ss_pred cchhhhhhhhccccCCCCCccccccC
Q 026720 206 PLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
++.+..++..||...+.+|++|.++.
T Consensus 389 p~~~~~~~~~c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 389 PKELAKVMKQCWKKDPEDRPTMSTIK 414 (474)
T ss_pred HHHHHHHHHHhccCChhhccCHHHHH
Confidence 88999999999999999999998764
No 116
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.60 E-value=2.1e-15 Score=120.78 Aligned_cols=175 Identities=34% Similarity=0.564 Sum_probs=125.8
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..+|..|+ .|++.+..+--. .++...+..+... +.|+. ++|..++.|++++|+++++ ..+..+++++
T Consensus 77 ~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 77 INLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLE---------YLHSNWILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeecCCChhhEEEcCCCCEEEccc
Confidence 35777788 777766543211 1222233334333 55555 8898899999999999999 4667899999
Q ss_pred cccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.+....... .......++.|.+||.+.+...++...|+||+|++++++++|.++|++....+...++++..+.|....
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
T cd07841 147 GLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEEN 226 (298)
T ss_pred eeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhh
Confidence 9887664421 122234566799999886555678899999999999999999999999988888888887766555444
Q ss_pred Cc---------------------------chhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WP---------------------------LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
|+ +.+..+...++...+.+|+++.+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 227 WPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 32 334456677888899999999998764
No 117
>PTZ00284 protein kinase; Provisional
Probab=99.60 E-value=3.6e-15 Score=126.83 Aligned_cols=134 Identities=23% Similarity=0.309 Sum_probs=99.3
Q ss_pred Hhhh-cccccCCcCCCcEEeeC-C----------------eeeEeeccccccccCCCCCCCcccCcccccccccccccCC
Q 026720 97 SLHR-QGYFHRDLKPSNLLVSK-G----------------VIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIY 158 (234)
Q Consensus 97 ~l~~-~~~~~~~l~p~~~~~~~-~----------------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~ 158 (234)
++|. .+++|+|++|.|+++.. . ..+++|||.+..... ......+++.|+|||++.+ ..|
T Consensus 246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~-~~~ 322 (467)
T PTZ00284 246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLG-LGW 322 (467)
T ss_pred HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhc-CCC
Confidence 7886 48999999999999942 1 378999997754322 2234578889999999874 448
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC----------------------------------
Q 026720 159 GPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS---------------------------------- 204 (234)
Q Consensus 159 ~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~---------------------------------- 204 (234)
+..+|+||+||++|||++|+.||++....+.+..+.+..+.++...
T Consensus 323 ~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (467)
T PTZ00284 323 MYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARA 402 (467)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcc
Confidence 8999999999999999999999999888777766655544332110
Q ss_pred -------CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 -------WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
....+..++..+...++.+|++.++++.+
T Consensus 403 ~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 403 RPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred cchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 01123345566778889999999998764
No 118
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.60 E-value=2.7e-15 Score=118.95 Aligned_cols=174 Identities=22% Similarity=0.317 Sum_probs=125.3
Q ss_pred HHHHHHHhhcCChHHHHHHHHh--------------hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcE
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL--------------MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNL 113 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~--------------m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~ 113 (234)
..++..|+..|.+.+..+-... ++...+..+... +.++. ++|..+++|++++|+++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~---------~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMV---------YLASQHFVHRDLATRNC 153 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHH---------HHhhCCeeccccccceE
Confidence 4566678888888776543210 111122222222 55555 78888999999999999
Q ss_pred Ee-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHH
Q 026720 114 LV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSAD 188 (234)
Q Consensus 114 ~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~ 188 (234)
++ .....++.+++.+..+..... ......+..|+|||.+.+. .++..+|+||+|++++|+++ |..||.+....+
T Consensus 154 li~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~ 232 (280)
T cd05049 154 LVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYR-KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE 232 (280)
T ss_pred EEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccC-CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 99 467889999998876543211 1122335679999998743 47889999999999999998 999998877766
Q ss_pred HHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 189 QIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 189 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
....+......+.+..++..+..+...|+..++.+|+++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 233 VIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 66555544444455677888899999999999999999998864
No 119
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=3e-15 Score=120.53 Aligned_cols=175 Identities=19% Similarity=0.247 Sum_probs=131.5
Q ss_pred HHHHHHhhcCChHHHHHH-H-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKV-F-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~-~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.+|..|+.+|++-+.++- | +.|.+.-+.+...- +.|+. |+|..+.+||++++.++++ .++..++++|
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~---------YLH~~G~IHRdvKAgnILi~~dG~VkLadF 170 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALD---------YLHQNGHIHRDVKAGNILIDSDGTVKLADF 170 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHH---------HHHhcCceecccccccEEEcCCCcEEEcCc
Confidence 368889999988776442 2 22334333333333 66777 8999999999999999999 5789999999
Q ss_pred cccccccCCC-----CCCCcccCccccccccc-ccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 126 GMVKEIDSNL-----PCTDYVTTRWYRGPEVL-LFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 126 ~~a~~~~~~~-----~~~~~~~~~~~~~pe~~-~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
+....+...- ....++++++|+|||++ .....|+.+.||||+|+...|+..|..||........+....+.-..
T Consensus 171 gvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp 250 (516)
T KOG0582|consen 171 GVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPP 250 (516)
T ss_pred eeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCC
Confidence 8766554321 12567899999999994 33445999999999999999999999999988877776555443221
Q ss_pred -C-----C---CCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 -P-----T---KDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 -~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+ + ...+++.+++++..|...++.+|+|.+++++.
T Consensus 251 ~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 251 TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1 1 12455678889999999999999999999875
No 120
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.60 E-value=5e-15 Score=118.54 Aligned_cols=135 Identities=16% Similarity=0.086 Sum_probs=102.0
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCC--------CCCCcccCcccccccccccccCCCCcchHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNL--------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAM 167 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~ 167 (234)
++|+.+++|+|++|+|+++. ....+++|||.+..+.... ......+++.|++||+..+ ..++..+|+||+
T Consensus 141 ~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~~~~~DiwSl 219 (294)
T PHA02882 141 YIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACVTRRGDLESL 219 (294)
T ss_pred HHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCCCcHHHHHHH
Confidence 88998999999999999994 5667899999987653211 1122357888999998874 447899999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHH-----HHhhC--CCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 168 GAIMFEMLSFGILFPGKSSADQIYKI-----CQLIG--SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 168 g~~l~e~~~~~~~f~~~~~~~~~~~i-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|++++|+++|+.||.+.......... ...+. .......++.+..+.+.|+...+.+||+++++..
T Consensus 220 G~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 220 GYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 99999999999999987543332221 12222 1223455678889999999999999999998764
No 121
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.59 E-value=3.1e-15 Score=117.80 Aligned_cols=176 Identities=23% Similarity=0.375 Sum_probs=126.7
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
+..++..|+..+.+.+..+-...++...+..+... +.++. ++|+.+++|++++|.++++ .....++.++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~---------~lH~~~ivH~di~p~nil~~~~~~~~l~df 150 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLN---------YLHNRGIIHRDIKGANILVDNKGGIKISDF 150 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHH---------HHHhcCcccccCCHHHEEEcCCCCEEeccc
Confidence 34567778888887776544333443333344333 55555 7888899999999999999 4567899999
Q ss_pred cccccccCCCC-------CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC
Q 026720 126 GMVKEIDSNLP-------CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG 198 (234)
Q Consensus 126 ~~a~~~~~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~ 198 (234)
+.+..+..... .....++..|++||...+. .++...|+||+|++++++++|..||.+........++.....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06628 151 GISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT-SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS 229 (267)
T ss_pred CCCcccccccccCCccccccccCCCcCccChhHhccC-CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC
Confidence 98877653211 1123456779999988643 467889999999999999999999998766555444444323
Q ss_pred CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..+++.+..+++.++...+.+|+++.++++.
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 230 PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 33345677888889999999999999999998864
No 122
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.59 E-value=1.8e-15 Score=120.34 Aligned_cols=137 Identities=30% Similarity=0.569 Sum_probs=102.9
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|..+++|++++|+|+++ .....++.|||.+........ .....++..|.+||.+.+...++...|+||+|++++++
T Consensus 114 ~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 193 (284)
T cd07839 114 FCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 193 (284)
T ss_pred HHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHH
Confidence 8898899999999999999 466789999998876543221 12234567899999987655578899999999999999
Q ss_pred HhCCCC-CCCCChHHHHHHHHHhhCCCCCCCC----------------------------cchhhhhhhhccccCCCCCc
Q 026720 175 LSFGIL-FPGKSSADQIYKICQLIGSPTKDSW----------------------------PLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 175 ~~~~~~-f~~~~~~~~~~~i~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~ 225 (234)
++|+.| |++....+.+..+++..+.++...| +.....+.+.++..++.+|+
T Consensus 194 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 273 (284)
T cd07839 194 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI 273 (284)
T ss_pred HhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcC
Confidence 998866 5666666666666666555443333 23344567778888999999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
++++++.+
T Consensus 274 t~~~il~h 281 (284)
T cd07839 274 SAEEALQH 281 (284)
T ss_pred CHHHHhcC
Confidence 99998864
No 123
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.59 E-value=2.5e-15 Score=119.50 Aligned_cols=174 Identities=31% Similarity=0.512 Sum_probs=123.1
Q ss_pred HHHHHHhhcCChHHHHHHHH---hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFN---LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~---~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
.++..|+. |.+.+..+... .++...+..+... +.|+. ++|..+++|++++|+++++ .+...++.+
T Consensus 75 ~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~~i~H~dl~p~nil~~~~~~~~l~d 144 (285)
T cd07861 75 YLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGIL---------FCHSRRVLHRDLKPQNLLIDNKGVIKLAD 144 (285)
T ss_pred EEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHH---------HHHhCCeeecCCCHHHEEEcCCCcEEECc
Confidence 45666765 45544433221 1222333344443 66666 8899999999999999999 567789999
Q ss_pred ccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 125 LGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 125 ~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
+|.+........ .....++..|++||.+.+...++..+|+||+|++++++++|++||.+....+.+..+++..+.+...
T Consensus 145 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd07861 145 FGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTED 224 (285)
T ss_pred ccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 998876533211 1223456779999988655557889999999999999999999999988888877777666554433
Q ss_pred CC----------------------------cchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SW----------------------------PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.| +.....++..++..++.+|+++.+++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 225 VWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 33 2334457777888899999999998864
No 124
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.59 E-value=2.6e-15 Score=117.49 Aligned_cols=175 Identities=22% Similarity=0.334 Sum_probs=130.3
Q ss_pred HHHHHHHhhcCChHHHHHHH---------HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C
Q 026720 49 TALVEMYSKCGHVEKAFKVF---------NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K 117 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~---------~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~ 117 (234)
..++..|+..|.+.+..+-. ..+++..+..+... +.|+. ++|..+++|++++|+++++. .
T Consensus 71 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~---------~lH~~~i~H~di~p~nili~~~ 141 (262)
T cd00192 71 LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME---------YLASKKFVHRDLAARNCLVGED 141 (262)
T ss_pred eEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH---------HHHcCCcccCccCcceEEECCC
Confidence 45777788888888765543 22333344444444 66777 89999999999999999994 5
Q ss_pred CeeeEeeccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 026720 118 GVIKIGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKI 193 (234)
Q Consensus 118 ~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i 193 (234)
...++.+++.+....... .......+..|.+||..... .++...|+||+|++++++++ |..||++....+....+
T Consensus 142 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~ 220 (262)
T cd00192 142 LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL 220 (262)
T ss_pred CcEEEcccccccccccccccccccCCCcCccccCHHHhccC-CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 788999999888765431 12233456679999988643 57889999999999999998 58999988766666666
Q ss_pred HHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 194 CQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
......+.+...+..+..+...++...+.+|+++++++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 221 RKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 5544444556667788888888999999999999998754
No 125
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.59 E-value=4.2e-15 Score=116.24 Aligned_cols=174 Identities=24% Similarity=0.380 Sum_probs=125.6
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.++..|+..+.+.+..+-.. .++...+..+.. ++.++. ++|..++.|++++|+++.+. ....++.+|
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~---------~lH~~~i~h~dl~~~nili~~~~~~~l~df 145 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA---------HLHSKKILHRDIKSLNLFLDAYDNVKIGDL 145 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCcceEEEeCCCCEEEccc
Confidence 56667788888876544321 111112222222 345555 78888999999999999994 567899999
Q ss_pred cccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.+..+.... ......++..|.+||+.... .++...|+||+|++++++++|+.||..........++.+....+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd08529 146 GVAKLLSDNTNFANTIVGTPYYLSPELCEDK-PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQM 224 (256)
T ss_pred ccceeccCccchhhccccCccccCHHHhcCC-CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccc
Confidence 9887654322 12234566789999998643 478899999999999999999999998876666666655444444446
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...|+..++.+|+++.+++..
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 225 YSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 67788889999999999999999998864
No 126
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.59 E-value=3.8e-15 Score=118.31 Aligned_cols=172 Identities=17% Similarity=0.293 Sum_probs=120.7
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.++.+|+..|++.+...... .++.+.+..|... +.|+. ++|..+++|++++|+|+++. ....++.|||
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~---------~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMY---------YLEEHRMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHHHCCEeccccCcceEEEcCCCcEEEcCCc
Confidence 46778888888877654321 2233334444433 45555 88988899999999999994 5678999999
Q ss_pred ccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhC-CCC
Q 026720 127 MVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIG-SPT 201 (234)
Q Consensus 127 ~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~-~~~ 201 (234)
.++.+.... ......++..|++||...+ ..++...|+||+|+++||+++ |..||.+...... .++.+... .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~ 232 (279)
T cd05111 155 VADLLYPDDKKYFYSEHKTPIKWMALESILF-GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLLEKGERLAQ 232 (279)
T ss_pred cceeccCCCcccccCCCCCcccccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHCCCcCCC
Confidence 987654321 1122334557999998864 347899999999999999998 8999987654433 33333222 233
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+..++..+..+...||...+.+||+++++++
T Consensus 233 ~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 233 PQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 4455666777888899999999999998864
No 127
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.59 E-value=2.7e-15 Score=119.68 Aligned_cols=173 Identities=21% Similarity=0.306 Sum_probs=123.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHh-------------hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEE
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL-------------MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLL 114 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~-------------m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~ 114 (234)
..++..|+..|.+.+...-... ++.+.+..+.. ++.++. ++|..+++|++++|++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~---------~lH~~~i~H~dlkp~Nil 152 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMV---------YLASQHFVHRDLATRNCL 152 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeecccCcceEE
Confidence 4577778888888776542210 11122222322 255555 789999999999999999
Q ss_pred e-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 026720 115 V-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQ 189 (234)
Q Consensus 115 ~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~ 189 (234)
+ .....++.+|+.+..+...-. .....++..|++||.+.+ ..++...|+||+|+++++|++ |.+||.+....+.
T Consensus 153 i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~ 231 (288)
T cd05093 153 VGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 231 (288)
T ss_pred EccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9 466789999998876543211 111233557999998863 457889999999999999998 8899988776666
Q ss_pred HHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccC
Q 026720 190 IYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 190 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
...+.+....+.....+..+..+...|+...+.+|+++++++
T Consensus 232 ~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~ 273 (288)
T cd05093 232 IECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIH 273 (288)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 655655443444456677888899999999999999999874
No 128
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.59 E-value=3.3e-15 Score=117.07 Aligned_cols=174 Identities=21% Similarity=0.324 Sum_probs=124.8
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..|.+.+...-.. .++...+..+.. ++.|+. ++|..++.|++++|+|+.+ .....++.++
T Consensus 74 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~ 144 (256)
T cd05114 74 LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGME---------YLERNSFIHRDLAARNCLVSSTGVVKVSDF 144 (256)
T ss_pred EEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHH---------HHHHCCccccccCcceEEEcCCCeEEECCC
Confidence 357778888898876543211 111122222222 244444 7888899999999999999 4567899999
Q ss_pred cccccccCCCCC--CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLPC--TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
|.+......... .....+..|++||...+ ..++...|+||+|++++++++ |+.||.+....+.+.++.+....+.+
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~ 223 (256)
T cd05114 145 GMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF-SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP 223 (256)
T ss_pred CCccccCCCceeccCCCCCchhhCChhhccc-CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC
Confidence 988765432211 12233446899999863 347889999999999999999 89999988877777777665444455
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..+...||...+.+||++++++.
T Consensus 224 ~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 224 KLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 566777888888999999999999999875
No 129
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.59 E-value=4.5e-15 Score=117.20 Aligned_cols=172 Identities=16% Similarity=0.208 Sum_probs=122.2
Q ss_pred HHHHHHhhcCChHHHHHHHHhhc-cCccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVI 120 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~-~~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~ 120 (234)
.++..|+..|.+.+.... +... .+...++..+ +.|+. ++|..+++|++++|+|+++. ....
T Consensus 82 ~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dlkp~Nil~~~~~~~ 151 (272)
T cd05075 82 VVILPFMKHGDLHSFLLY-SRLGDCPQYLPTQMLVKFMTDIASGME---------YLSSKSFIHRDLAARNCMLNENMNV 151 (272)
T ss_pred EEEEEeCCCCcHHHHHHH-hcccCCcccCCHHHHHHHHHHHHHHHH---------HHHHCCeeccccchhheEEcCCCCE
Confidence 567788888888765422 2211 1222333333 44444 78888999999999999994 5678
Q ss_pred eEeeccccccccCCCCC---CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q 026720 121 KIGDLGMVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQL 196 (234)
Q Consensus 121 ~~~~~~~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~ 196 (234)
+++|||.+..+...... .....++.|.+||.... ..++...|+||+|++++|+++ |+.||++.........+.+.
T Consensus 152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 230 (272)
T cd05075 152 CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG 230 (272)
T ss_pred EECCCCcccccCcccceecCCcccCCcccCCHHHccC-CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 89999998876432211 11123456889998863 457889999999999999998 78999987766555545443
Q ss_pred hCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 197 IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+....++..+..+...|+..++.+|+++++++.
T Consensus 231 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 231 NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 333445567778888999999999999999998864
No 130
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.59 E-value=1.3e-15 Score=123.48 Aligned_cols=167 Identities=23% Similarity=0.264 Sum_probs=116.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.....--..+++..+..|... +.|+. ++|..+++|++++|+|+++ .....++.|||.
T Consensus 72 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~givH~dikp~NIll~~~~~~kl~Dfg~ 142 (323)
T cd05575 72 YFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALG---------YLHSLNIIYRDLKPENILLDSQGHVVLTDFGL 142 (323)
T ss_pred EEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEeCCCCHHHeEECCCCcEEEeccCC
Confidence 577888998888665432222333333334333 66666 8899999999999999999 467889999998
Q ss_pred cccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+....... ......+++.|++||.+.+ ..++..+|+||+|++++++++|..||.+....+....+........ ...+
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~ 220 (323)
T cd05575 143 CKEGIEHSKTTSTFCGTPEYLAPEVLRK-QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK-PNIS 220 (323)
T ss_pred CcccccCCCccccccCChhhcChhhhcC-CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCC
Confidence 87643221 2233467888999999874 4478899999999999999999999998776665555554322222 2235
Q ss_pred chhhhhhhhccccCCCCCccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~ 227 (234)
..+..+.+.+...++.+|++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~ 241 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGA 241 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCC
Confidence 566666666777777777765
No 131
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.59 E-value=2.3e-15 Score=121.47 Aligned_cols=103 Identities=35% Similarity=0.580 Sum_probs=92.3
Q ss_pred cCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCccccccc
Q 026720 73 EKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPE 150 (234)
Q Consensus 73 ~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe 150 (234)
++.++.|.+- +.|+- ++|.+.++.+|++|.|+++ ..+.++++|+|+|..+....+..+-+++.+|+|||
T Consensus 286 e~ra~FYAAEi~cGLe---------hlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPE 356 (591)
T KOG0986|consen 286 EQRARFYAAEIICGLE---------HLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPE 356 (591)
T ss_pred hHHHHHHHHHHHhhHH---------HHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHH
Confidence 4567788887 77888 9999999999999999999 57899999999999999888888789999999999
Q ss_pred ccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 026720 151 VLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS 185 (234)
Q Consensus 151 ~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~ 185 (234)
++. +..|+...|.||+||++|||+.|+.||....
T Consensus 357 vl~-ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K 390 (591)
T KOG0986|consen 357 VLQ-NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK 390 (591)
T ss_pred HHc-CCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence 998 4559999999999999999999999998654
No 132
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.59 E-value=3.8e-15 Score=120.82 Aligned_cols=166 Identities=27% Similarity=0.356 Sum_probs=116.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|++.....-...++++.+..+... +.|+. ++|..+++|++++|+|+++ .....+++|||.
T Consensus 77 ~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~---------~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~ 147 (323)
T cd05615 77 YFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF---------FLHRRGIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccCCCHHHeEECCCCCEEEecccc
Confidence 577889998988776544344444455555444 66666 8899999999999999999 466789999998
Q ss_pred cccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+...... .......+++.|+|||++.+ ..++..+|+||+|++++++++|..||.+.........+.+.-.. .+...+
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-~p~~~~ 225 (323)
T cd05615 148 CKEHMVDGVTTRTFCGTPDYIAPEIIAY-QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-YPKSLS 225 (323)
T ss_pred ccccCCCCccccCccCCccccCHHHHcC-CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCccCC
Confidence 8764321 12233457889999999864 44788999999999999999999999988776666655543222 122334
Q ss_pred chhhhhhhhccccCCCCCcc
Q 026720 207 LGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~ 226 (234)
.....+...+....+.+|++
T Consensus 226 ~~~~~li~~~l~~~p~~R~~ 245 (323)
T cd05615 226 KEAVSICKGLMTKHPSKRLG 245 (323)
T ss_pred HHHHHHHHHHcccCHhhCCC
Confidence 44455555555555566655
No 133
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.59 E-value=4.3e-15 Score=120.07 Aligned_cols=172 Identities=17% Similarity=0.299 Sum_probs=119.4
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|.+.+...-.. .++...+..|... +.|+. ++|+.+++|++++|+|+++ .....+++|||
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~---------~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG 154 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN---------YLEERRLVHRDLAARNVLVKTPQHVKITDFG 154 (316)
T ss_pred eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHH---------HHHhcCeeccccchhheEecCCCcEEEcccc
Confidence 47777888888876543211 1111222233322 45555 8899999999999999999 45678999999
Q ss_pred ccccccCCCCC---CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh-hCCCC
Q 026720 127 MVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQL-IGSPT 201 (234)
Q Consensus 127 ~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~-~~~~~ 201 (234)
.+..+...... .....+..|++||.+. ...++..+|+||+|+++||+++ |..||.+....+. ..+... ...|.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~ 232 (316)
T cd05108 155 LAKLLGADEKEYHAEGGKVPIKWMALESIL-HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 232 (316)
T ss_pred ccccccCCCcceeccCCccceeecChHHhc-cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCCCCC
Confidence 98876432111 1122345689999886 3457889999999999999997 8899987655443 344432 23344
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+..++..+..++..||...+.+|+++.+++.
T Consensus 233 ~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 233 PPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 4556677888889999999999999998864
No 134
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.58 E-value=1.9e-15 Score=122.46 Aligned_cols=167 Identities=23% Similarity=0.232 Sum_probs=115.6
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.....--..+++..+..|... +.|+. ++|..+++|+|++|.|+++ ..+..+++|||.
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 142 (321)
T cd05603 72 YFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIG---------YLHSLNIIYRDLKPENILLDSQGHVVLTDFGL 142 (321)
T ss_pred EEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEeccCCHHHeEECCCCCEEEccCCC
Confidence 467788888888654332222333334444443 66777 8899999999999999999 467889999998
Q ss_pred cccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+..... ........+++.|++||.+.. ..++...|+||+|++++|+++|..||.+.........+...... .+...+
T Consensus 143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~ 220 (321)
T cd05603 143 CKEGVEPEETTSTFCGTPEYLAPEVLRK-EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQ-LPGGKT 220 (321)
T ss_pred CccCCCCCCccccccCCcccCCHHHhcC-CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCC-CCCCCC
Confidence 875322 112233567889999999863 44788999999999999999999999987665555444433221 122344
Q ss_pred chhhhhhhhccccCCCCCccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~ 227 (234)
..+..+...+...++.+|++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~ 241 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGA 241 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCC
Confidence 556666666777777777654
No 135
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.58 E-value=3.7e-15 Score=116.85 Aligned_cols=173 Identities=20% Similarity=0.254 Sum_probs=122.5
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+...--..+++..+..|... +.++. ++|..++.|++++|.++++ .....++++|+.
T Consensus 71 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~---------~lh~~~i~H~di~p~nili~~~~~~kl~df~~ 141 (257)
T cd05060 71 MLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMA---------YLESKHFVHRDLAARNVLLVNRHQAKISDFGM 141 (257)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHH---------HHhhcCeeccCcccceEEEcCCCcEEeccccc
Confidence 466667777777665432222223333344333 55555 8888889999999999999 466789999998
Q ss_pred cccccCCCCCC-C---cccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 128 VKEIDSNLPCT-D---YVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 128 a~~~~~~~~~~-~---~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.......... . ...+..|.+||...+ ..++...|+||+|++++++++ |..||......+....+......+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd05060 142 SRALGAGSDYYRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRP 220 (257)
T ss_pred cceeecCCcccccccCccccccccCHHHhcC-CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCC
Confidence 88664322111 0 111235899998863 447889999999999999997 89999877665555445444334555
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..++..+..++..|+..++.+||++.+++.
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 677788889999999999999999998753
No 136
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.58 E-value=2.8e-15 Score=121.64 Aligned_cols=166 Identities=23% Similarity=0.302 Sum_probs=118.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.....- ..+.++.+..|... +.|+. ++|+.+++|++++|.|+++ .....+++|||
T Consensus 77 ~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~---------~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05589 77 VCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQ---------YLHENKIVYRDLKLDNLLLDTEGFVKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHH---------HHHhCCeEecCCCHHHeEECCCCcEEeCccc
Confidence 3577788888887654321 12233333444443 56666 8899999999999999999 46788999999
Q ss_pred ccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+...... .......+++.|++||.+.+ ..++...|+||+|++++++++|+.||.+....+....+...... .+...
T Consensus 147 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~-~p~~~ 224 (324)
T cd05589 147 LCKEGMGFGDRTSTFCGTPEFLAPEVLTE-TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR-YPRFL 224 (324)
T ss_pred CCccCCCCCCcccccccCccccCHhHhcC-CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCCCC
Confidence 87754321 12234567889999999874 45788999999999999999999999988777666665543222 22345
Q ss_pred cchhhhhhhhccccCCCCCcc
Q 026720 206 PLGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~ 226 (234)
+..+..+...++...+.+|++
T Consensus 225 ~~~~~~li~~~L~~dP~~R~~ 245 (324)
T cd05589 225 SREAISIMRRLLRRNPERRLG 245 (324)
T ss_pred CHHHHHHHHHHhhcCHhHcCC
Confidence 566667777778777888873
No 137
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.58 E-value=5.5e-15 Score=118.11 Aligned_cols=176 Identities=32% Similarity=0.520 Sum_probs=125.1
Q ss_pred HHHHHHHHhhcCChHHHHHHHHh-hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
+..++..|+. +.+.+....... +....+..+... +.|+. ++|..+++|++++|.++++ .....++.+
T Consensus 80 ~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~---------~LH~~~i~H~dl~p~nili~~~~~~~l~d 149 (293)
T cd07843 80 KIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVA---------HLHDNWILHRDLKTSNLLLNNRGILKICD 149 (293)
T ss_pred cEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeeccCCHHHEEECCCCcEEEee
Confidence 3456667776 455554332111 222333334333 56666 8898899999999999999 457889999
Q ss_pred ccccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 125 LGMVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 125 ~~~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
+|.+...... .......++..|++||.+.+...++...|+||+|++++++++|.+||.+....+...+++...+.|...
T Consensus 150 ~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (293)
T cd07843 150 FGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEK 229 (293)
T ss_pred cCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchH
Confidence 9988876543 122334556779999998755556889999999999999999999999988887777776655543332
Q ss_pred C-------------------------------CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 S-------------------------------WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. +++.+..+++.++...+.+|+++.+++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 230 IWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 2 23445566777888899999999998864
No 138
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.58 E-value=5.4e-16 Score=125.86 Aligned_cols=173 Identities=24% Similarity=0.270 Sum_probs=119.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..+|..|+..|.+.....--..+++..+..+... +.|+. ++|+ .+++|++++|+|+++ ..+..++.||
T Consensus 70 ~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~---------~lH~~~~ivHrDikp~NIll~~~~~~kL~Df 140 (325)
T cd05594 70 LCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD---------YLHSEKNVVYRDLKLENLMLDKDGHIKITDF 140 (325)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhcCCEEecCCCCCeEEECCCCCEEEecC
Confidence 4578889998888654332222333333344333 56666 8886 679999999999999 4677899999
Q ss_pred cccccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
|.+...... .......+++.|+|||++.+ ..++..+|+||+|++++++++|..||.+.........+..... .-+..
T Consensus 141 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~-~~p~~ 218 (325)
T cd05594 141 GLCKEGIKDGATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-RFPRT 218 (325)
T ss_pred CCCeecCCCCcccccccCCcccCCHHHHcc-CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-CCCCC
Confidence 988754321 22334567889999999864 4478999999999999999999999988766555444433221 22334
Q ss_pred CcchhhhhhhhccccCCCCCc-----cccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
.+..+..+...++..++.+|+ +..+++.
T Consensus 219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 556677777777777777775 6666654
No 139
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.58 E-value=3.8e-15 Score=117.84 Aligned_cols=174 Identities=19% Similarity=0.283 Sum_probs=122.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+....- .++...+..+... +.++. ++|..++.|++++|+++.+ .....++.+++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~---------~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g 143 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLE---------YLHEEGKIHRDIKAANILLSEEGDVKLADFG 143 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCCCHHHEEECCCCCEEEcccc
Confidence 34666778888887664421 2222233333333 55555 7888889999999999999 46678999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC-
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS- 204 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~- 204 (234)
.+..+.... ......++..|.+||...+.. ++...|+||+|++++++++|..||.+.........+-..........
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (274)
T cd06609 144 VSGQLTSTMSKRNTFVGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNK 222 (274)
T ss_pred cceeecccccccccccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccc
Confidence 988775532 223345667799999987444 78999999999999999999999987654444433333222111222
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+.+.|+..++.+|+++++++.+
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 56678888888999999999999998753
No 140
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.58 E-value=3.9e-15 Score=118.62 Aligned_cols=174 Identities=21% Similarity=0.309 Sum_probs=124.0
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++..|+..|++.+...... .++...+..|... +.|+. ++|..+++|++++|+|+++ .....++.|
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~iiH~dikp~Nil~~~~~~~~l~D 145 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLE---------DLHQERIVYRDLKPENILLDDHGHIRISD 145 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHHhCCEEeCCCCHHHEEECCCCCEEEee
Confidence 457788888888877553221 1333344455444 66777 8899999999999999999 456789999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHhhCCCC
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSS---ADQIYKICQLIGSPT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~---~~~~~~i~~~~~~~~ 201 (234)
||.+.............++..|++||.+.. ..++...|+||+|++++++++|..||.+... .+.............
T Consensus 146 fg~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd05630 146 LGLAVHVPEGQTIKGRVGTVGYMAPEVVKN-ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEY 224 (285)
T ss_pred ccceeecCCCccccCCCCCccccChHHHcC-CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhc
Confidence 998876544333333467888999999874 3478899999999999999999999987543 233333333333333
Q ss_pred CCCCcchhhhhhhhccccCCCCCcc-----ccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVN-----LLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 232 (234)
....+..+..+...++..++.+|++ ++++++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 225 SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 3455667788888899999999998 556654
No 141
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.58 E-value=4.1e-15 Score=118.01 Aligned_cols=137 Identities=39% Similarity=0.710 Sum_probs=109.6
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|..++.|++++|+++++. ....++.+++.+....... ......+...|.+||...+...++...|+||+|++++++
T Consensus 113 ~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l 192 (283)
T cd05118 113 FCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAEL 192 (283)
T ss_pred HHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999994 5678999999887765533 222345667799999987554678899999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcc-----------------------------hhhhhhhhccccCCCCCc
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKDSWPL-----------------------------GIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~ 225 (234)
++|+.+|++....+...++.+..+.+....|.. .+..++..|+..++.+|+
T Consensus 193 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 272 (283)
T cd05118 193 LSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRI 272 (283)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCc
Confidence 999999999988888888877766665544333 444677889999999999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
++++++..
T Consensus 273 ~~~~ll~~ 280 (283)
T cd05118 273 TAEQALAH 280 (283)
T ss_pred CHHHHhhC
Confidence 99998764
No 142
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.58 E-value=8e-16 Score=127.31 Aligned_cols=174 Identities=22% Similarity=0.319 Sum_probs=117.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.+|..|+..|++.+...-...+++..+..|.. ++.|+. ++|..+++|++++|.|+++ .....+++|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIE---------SVHKMGFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 356788999999888765433333333344443 367777 8999999999999999999 46778999999
Q ss_pred ccccccC--------------------------------------------CCCCCCcccCcccccccccccccCCCCcc
Q 026720 127 MVKEIDS--------------------------------------------NLPCTDYVTTRWYRGPEVLLFSEIYGPEV 162 (234)
Q Consensus 127 ~a~~~~~--------------------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~ 162 (234)
.+..+.. ........+++.|+|||++.+ ..++..+
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~ 225 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLC 225 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcce
Confidence 8743210 000112467889999999864 4478899
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC---CCCCCCcchhhhhhhhccccCCCCCc---cccccCCC
Q 026720 163 DKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS---PTKDSWPLGIQLASNLNWKLPQMGGV---NLLAVMPS 233 (234)
Q Consensus 163 d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 233 (234)
|+||+||+++|+++|+.||.+....+....+...... |.....+.....+...... ++.+|+ ++++++++
T Consensus 226 DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~-~p~~R~~~~t~~ell~h 301 (376)
T cd05598 226 DWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCC-GAEDRLGKNGADEIKAH 301 (376)
T ss_pred eeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhCC
Confidence 9999999999999999999988776665555432222 2222333333333322222 566676 77777654
No 143
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.58 E-value=5.3e-16 Score=125.51 Aligned_cols=167 Identities=24% Similarity=0.312 Sum_probs=121.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|++.+...--..+++..+..|... +.|+. ++|..+++|++++|+|+++ .....+++|||.
T Consensus 74 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 144 (318)
T cd05582 74 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD---------HLHSLGIIYRDLKPENILLDEEGHIKLTDFGL 144 (318)
T ss_pred EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCEecCCCCHHHeEECCCCcEEEeeccC
Confidence 477888888887665432222333444455444 66666 8899999999999999999 466789999998
Q ss_pred cccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+...... .......+++.|++||.+.+ ..++...|+||+|++++|+++|+.||.+....+....+.+.... .+...+
T Consensus 145 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~-~p~~~~ 222 (318)
T cd05582 145 SKESIDHEKKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG-MPQFLS 222 (318)
T ss_pred CcccCCCCCceecccCChhhcCHHHHcC-CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC-CCCCCC
Confidence 8765433 12234567888999999864 34688999999999999999999999988776666655543222 223455
Q ss_pred chhhhhhhhccccCCCCCccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~ 227 (234)
..+..+.+.++..++.+|++.
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a 243 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGA 243 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCC
Confidence 677778888888888999883
No 144
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.58 E-value=6.3e-15 Score=116.32 Aligned_cols=174 Identities=16% Similarity=0.213 Sum_probs=122.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHh------hccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCee
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL------MREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVI 120 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~------m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~ 120 (234)
..++..|+..|++......... ++...+..+. .++.|+. ++|+.+++|++++|+|+++. ....
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~---------~lH~~~i~H~dlkp~Nil~~~~~~~ 152 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME---------YLSNRNFIHRDLAARNCMLREDMTV 152 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHH---------HHHhCCeeccccchheEEECCCCeE
Confidence 4566778888888876543211 1111222222 2355555 88998999999999999994 5578
Q ss_pred eEeeccccccccCCCCC---CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q 026720 121 KIGDLGMVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQL 196 (234)
Q Consensus 121 ~~~~~~~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~ 196 (234)
++++||.++........ .....+..|.+||... ...++..+|+||+|++++|+++ |..||.+....+....+...
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 231 (273)
T cd05035 153 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA-DRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG 231 (273)
T ss_pred EECCccceeeccccccccccccccCCccccCHhhcc-cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 99999998876543211 1112234688999875 3447889999999999999998 88999887776665555443
Q ss_pred hCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 197 IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+.+..++..+..+...|+...+.+|+++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 232 NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 333344566778888888899999999999998764
No 145
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.58 E-value=3.6e-15 Score=116.93 Aligned_cols=175 Identities=20% Similarity=0.303 Sum_probs=127.1
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..|.+.+...-.. .++...+..+... +.|+. ++|..++.|++++|.++++ .+...+++++
T Consensus 74 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dl~p~nili~~~~~~kl~d~ 144 (256)
T cd05113 74 IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMA---------YLESKQFIHRDLAARNCLVDDQGCVKVSDF 144 (256)
T ss_pred cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccccCcceEEEcCCCCEEECCC
Confidence 367788888888877643211 1222233333333 55566 7898899999999999999 4567899999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+..+..... .....++..|.+||...+. .++...|+||+|++++++++ |..||......+...++.+....+.+
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~-~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd05113 145 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYS-KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP 223 (256)
T ss_pred ccceecCCCceeecCCCccChhhCCHHHHhcC-cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC
Confidence 98876543211 1112233568999998643 37889999999999999998 89999887776666666655444555
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..+..+...||..++.+|+++.+++..
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 224 HLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 6677888899999999999999999998754
No 146
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.58 E-value=5.2e-15 Score=116.43 Aligned_cols=173 Identities=16% Similarity=0.274 Sum_probs=122.1
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-.. .++...+..+... +.|+. ++|..+++|++++|.++++ .....++.++
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~---------~lH~~~i~H~dlkp~nil~~~~~~~kl~df 148 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME---------YLEKKNFIHRDLAARNCLVGENHLVKVADF 148 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEeecccCcceEEEcCCCcEEeCCC
Confidence 46667777788877543211 1111222233333 56666 8899999999999999999 4677899999
Q ss_pred cccccccCCCCC--CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLPC--TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+......... .....+..|.+||...+ ..++...|+||+|++++|+++ |..||++....+....+......+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (263)
T cd05052 149 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERP 227 (263)
T ss_pred ccccccccceeeccCCCCCccccCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC
Confidence 988765432111 11122446999998864 446888999999999999998 88999987665554444443344445
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..+...|+..++.+||++.+++.
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 667788888999999999999999998764
No 147
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.58 E-value=3.9e-15 Score=119.50 Aligned_cols=137 Identities=31% Similarity=0.597 Sum_probs=105.4
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|+.+++|++++|+|+++ .....++++||.+....... ......++..|.+||...+...++...|+||+|+++++|
T Consensus 119 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el 198 (301)
T cd07873 119 YCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 198 (301)
T ss_pred HHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHH
Confidence 8899999999999999999 45678999999887654321 122334567899999986555578899999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc-----------------------------chhhhhhhhccccCCCCCc
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKDSWP-----------------------------LGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~ 225 (234)
++|++||++....+....+.+..+.|....|+ ..+..++..+...++.+|+
T Consensus 199 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~ 278 (301)
T cd07873 199 STGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRI 278 (301)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCc
Confidence 99999999888777777777666655444443 2334566667788899999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
+.++++.+
T Consensus 279 t~~eil~h 286 (301)
T cd07873 279 SAEEAMKH 286 (301)
T ss_pred CHHHHhcC
Confidence 99998864
No 148
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.57 E-value=4.2e-15 Score=116.71 Aligned_cols=174 Identities=21% Similarity=0.342 Sum_probs=125.4
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++..|+..|.+.+...-.. ..+...+..|... +.|+. ++|..+++|++++|.|+++ .....++.+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---------~LH~~~i~H~dl~p~nili~~~~~~~l~d 146 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA---------YIERKNYIHRDLRAANVLVSESLMCKIAD 146 (261)
T ss_pred cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccccchhhEEecCCCcEEECC
Confidence 356777888888877643211 0111122233332 45555 7888889999999999999 456789999
Q ss_pred ccccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 125 LGMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
|+.+........ ......+..|++||.... ..++...|+||+|++++++++ |..||++....+....+.+....+.
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 225 (261)
T cd05072 147 FGLARVIEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPR 225 (261)
T ss_pred CccceecCCCceeccCCCccceecCCHHHhcc-CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 999887644221 122233456999998864 346788999999999999998 8999998877776666665555555
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
....++.+..+...|+..++.+||+++++++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 226 MENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 5667788888999999999999999998753
No 149
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.57 E-value=1.2e-14 Score=113.69 Aligned_cols=174 Identities=21% Similarity=0.404 Sum_probs=123.3
Q ss_pred HHHHHHhhcCChHHHHHHH--HhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~--~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..+++.+...-. ..++...+..+.. ++.++. ++|+.+++|++++|+++++ .....++.+|
T Consensus 76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~---------~lH~~~i~H~di~p~nil~~~~~~~~l~df 146 (257)
T cd08223 76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQ---------YLHEKHILHRDLKTQNVFLTRTNIIKVGDL 146 (257)
T ss_pred EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCchhEEEecCCcEEEecc
Confidence 4677788888876654321 0122222333322 355666 8899999999999999999 4567899999
Q ss_pred cccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.+......- ......+++.|++||...+ ..++...|+||+|++++++++|+.||++.........+......+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (257)
T cd08223 147 GIARVLENQCDMASTLIGTPYYMSPELFSN-KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKD 225 (257)
T ss_pred cceEEecccCCccccccCCcCccChhHhcC-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccc
Confidence 9887653321 1223456778999999864 3467889999999999999999999987766555555444332233345
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...++...+.+|+++.+++.+
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 226 YSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred cCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 66778888888999999999999998764
No 150
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.57 E-value=2.4e-15 Score=118.48 Aligned_cols=175 Identities=19% Similarity=0.331 Sum_probs=122.0
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+.......++...+..+... +.|+. ++|..++.|++++|.|+++. ....++.++|.
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~ 152 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLA---------YLHSKGKMHRDIKGANILLTDNGDVKLADFGV 152 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCccccCCCHHHEEECCCCCEEECcCcc
Confidence 456777888888776543222333333344333 55555 88988999999999999994 56689999998
Q ss_pred cccccCCCC-CCCcccCccccccccccc--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC----C
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS----P 200 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~----~ 200 (234)
+..+..... .....++..|++||.+.. ...++...|+||+|++++|+++|+.||.+....+....+...... +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T cd06646 153 AAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLK 232 (267)
T ss_pred ceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCc
Confidence 887643221 223456778999998742 233677899999999999999999999765544333332221111 1
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+...|+..+..+.+.|+..++.+|+++++++..
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred cccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 224577788889999999999999999999875
No 151
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.57 E-value=7.4e-15 Score=115.34 Aligned_cols=174 Identities=21% Similarity=0.327 Sum_probs=123.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+...-...+++..+..|.. ++.|+. ++|..+++|++++|.|+++ .....++.+||.
T Consensus 80 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~ 150 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVE---------YLHSNMIVHRDIKGANILRDSAGNVKLGDFGA 150 (263)
T ss_pred EEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 45556777777776554332233222333333 366666 8899999999999999999 456789999998
Q ss_pred cccccCCCCC----CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC-CCC
Q 026720 128 VKEIDSNLPC----TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS-PTK 202 (234)
Q Consensus 128 a~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~-~~~ 202 (234)
+......... ....++..|.+||...+. .++...|+||+|+++|++++|+.||.+........++...-.. +.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 229 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGE-GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLP 229 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccC-CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCC
Confidence 8765332111 223456789999998754 3788999999999999999999999877666555554333222 223
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..+..++..++...+..|+++.++++.
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 230 SHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 4556778888899999999999999998864
No 152
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.57 E-value=6.7e-15 Score=116.96 Aligned_cols=175 Identities=18% Similarity=0.293 Sum_probs=124.5
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|.+.....-.+ .+++..+..+... +.|+. ++|+.++.|++++|.++++ .....+++++|
T Consensus 78 ~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~---------~LH~~~i~H~dlkp~nili~~~~~~kl~dfg 148 (282)
T cd06643 78 WILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALN---------YLHENKIIHRDLKAGNILFTLDGDIKLADFG 148 (282)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeecCCCcccEEEccCCCEEEcccc
Confidence 46667788787766432211 1222333333333 55555 8899899999999999998 45678999999
Q ss_pred ccccccCCC-CCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC--
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS-- 199 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~-- 199 (234)
.+....... ......++..|++||.+.. ...++...|+||+|+++|++++|++||.+.........+......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd06643 149 VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL 228 (282)
T ss_pred ccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC
Confidence 887654321 1223456778999998732 233677899999999999999999999987776666665443221
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.+..++..+..++..|+..++.+|+++++++..
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2334577888999999999999999999998764
No 153
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.57 E-value=1.8e-16 Score=121.98 Aligned_cols=169 Identities=19% Similarity=0.318 Sum_probs=126.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhh-ccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLM-REKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m-~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.+|.+||.+|++.+..++-+.- .+..+.+... -+.|+- ++|...-+|++++..|++++ .+.+++.|||
T Consensus 104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~---------YLH~~~KIHRDIKAGNILLNT~G~AKLADFG 174 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQ---------YLHDLKKIHRDIKAGNILLNTDGIAKLADFG 174 (502)
T ss_pred EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHH---------HHHHHHHHHhhcccccEEEcccchhhhhhcc
Confidence 4789999999999998875442 2222222211 155555 66655468999999999994 7899999999
Q ss_pred ccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC---
Q 026720 127 MVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK--- 202 (234)
Q Consensus 127 ~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~--- 202 (234)
.|.++...|. .++.+++++|+|||++. -..|++..|+||+|+...||..|++||.+....-. ||-..-.|++
T Consensus 175 VAGQLTDTMAKRNTVIGTPFWMAPEVI~-EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA---IFMIPT~PPPTF~ 250 (502)
T KOG0574|consen 175 VAGQLTDTMAKRNTVIGTPFWMAPEVIE-EIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA---IFMIPTKPPPTFK 250 (502)
T ss_pred ccchhhhhHHhhCccccCcccccHHHHH-HhccchhhhHhhhcchhhhhhcCCCCcccccccce---eEeccCCCCCCCC
Confidence 9999988874 56789999999999985 23489999999999999999999999987644433 5555555554
Q ss_pred --CCCcchhhhhhhhccccCCCCCccccccC
Q 026720 203 --DSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
+-|+..+..+.+.|.--.+.+|.+.-.++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~ 281 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLC 281 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHh
Confidence 57888888888888766666666554444
No 154
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.57 E-value=1.3e-15 Score=126.65 Aligned_cols=175 Identities=19% Similarity=0.295 Sum_probs=125.2
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
++|..+|+...|-.-.++-+ .-+-.|..|...-+..++.. |||...|+|+|++.+||.+ .++.++++|||++
T Consensus 463 AIiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~--YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMD--YLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred eeeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhh--hhhhhhhhhhhccccceEEccCCcEEEecccce
Confidence 45555555544443332211 22344555665555555555 8898889999999999999 4588999999987
Q ss_pred cc---ccCCCCCCCcccCccccccccccc--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHhhCCCCC
Q 026720 129 KE---IDSNLPCTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIY-KICQLIGSPTK 202 (234)
Q Consensus 129 ~~---~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~-~i~~~~~~~~~ 202 (234)
.. +...+......++..|+|||++.. ...|+..+|+||+|+++|||++|..||. ....++.+ .+=+....|+.
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~ 614 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDL 614 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccc
Confidence 64 233344455677888999999853 2248999999999999999999999999 44555443 34445455664
Q ss_pred ----CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 ----DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+++..+|..-||+..+.+||.|..|+.
T Consensus 615 s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 615 SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 466678888888899999999999998864
No 155
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.57 E-value=5.5e-15 Score=116.44 Aligned_cols=175 Identities=18% Similarity=0.326 Sum_probs=123.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+.......+++..+..+... +.|+. ++|..+++|++++|.++++ .....++.+||.
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~ 152 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLY---------YLHSKGKMHRDIKGANILLTDNGHVKLADFGV 152 (267)
T ss_pred EEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHEEECCCCCEEECccee
Confidence 466778888888887654443443333333333 56666 8898899999999999999 456788999998
Q ss_pred cccccCCCC-CCCcccCcccccccccc--cccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC----
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLL--FSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP---- 200 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~--~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~---- 200 (234)
+........ .....++..|++||.+. ....++..+|+||+|+++++++++..||.+................+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T cd06645 153 SAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK 232 (267)
T ss_pred eeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc
Confidence 876543221 23346778899999863 12346789999999999999999999987665444333332221111
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+...|+..+..+...++...+.+|+++++++.+
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 123567778888888999999999999998864
No 156
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.57 E-value=5.1e-15 Score=119.22 Aligned_cols=174 Identities=32% Similarity=0.510 Sum_probs=120.6
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.+|..|+.. .+.+..... ..+....+..+... +.|+. ++|..+++|++++|.++++ .....++.++|
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQ---------YLHENFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEECCCCCEEECccc
Confidence 466666653 343332211 11222333334333 56666 8899999999999999999 45678999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+....... .......+..|.+||.+.+...++...|+||+|++++++++|.+||++....+.+..+.+..+.+....|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 154 LARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred eeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 888765421 1122234567999999865556789999999999999999999999998888888777776665544333
Q ss_pred -----------------------------cchhhhhhhhccccCCCCCccccccCCC
Q 026720 206 -----------------------------PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 206 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.....++..+...++.+|+++++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 2223345666777888999999988764
No 157
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.57 E-value=6.9e-15 Score=116.91 Aligned_cols=170 Identities=24% Similarity=0.306 Sum_probs=118.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHh----hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeE
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKI 122 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~ 122 (234)
..++..|+..|.+......... ++++.+..+... +.|+. ++|+.+++|++++|+|+++ .....++
T Consensus 68 ~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dlkp~Nili~~~~~~~l 138 (280)
T cd05608 68 LCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLE---------HLHQRRIIYRDLKPENVLLDNDGNVRI 138 (280)
T ss_pred EEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEECCCCCEEE
Confidence 4578889999998765432211 223333444443 66666 8999999999999999999 4567899
Q ss_pred eeccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC-
Q 026720 123 GDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP- 200 (234)
Q Consensus 123 ~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~- 200 (234)
.+||.+..+.... ......+++.|++||.+.+ ..++...|+||+|++++++++|+.||.+.........+.+.....
T Consensus 139 ~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 217 (280)
T cd05608 139 SDLGLAVELKDGQSKTKGYAGTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS 217 (280)
T ss_pred eeCccceecCCCCccccccCCCcCccCHHHhcC-CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC
Confidence 9999887654322 1234567788999999874 447889999999999999999999998765433333333322221
Q ss_pred --CCCCCcchhhhhhhhccccCCCCCcccc
Q 026720 201 --TKDSWPLGIQLASNLNWKLPQMGGVNLL 228 (234)
Q Consensus 201 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (234)
.+...+..+..+...++..++.+|++++
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (280)
T cd05608 218 VTYPDKFSPASKSFCEALLAKDPEKRLGFR 247 (280)
T ss_pred CCCcccCCHHHHHHHHHHhcCCHHHhcCCC
Confidence 1233556677777788888889998553
No 158
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.57 E-value=7.5e-15 Score=116.98 Aligned_cols=169 Identities=22% Similarity=0.302 Sum_probs=120.5
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++..|+..|.+.+...-.. .++...+..+... +.|+. ++|+.+++|++++|.|+++ .....++.|
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~---------~lH~~~iiH~dikp~Nili~~~~~~kl~D 145 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLE---------DLHRENTVYRDLKPENILLDDYGHIRISD 145 (285)
T ss_pred EEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeecCCCHHHEEECCCCCEEEec
Confidence 457777888888876543211 1333344444444 66666 8899999999999999999 456789999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC---CC
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS---PT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~---~~ 201 (234)
||.+.............++..|++||.+.+ ..++...|+||+|++++++++|..||.+.........+...... ..
T Consensus 146 fg~~~~~~~~~~~~~~~g~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd05632 146 LGLAVKIPEGESIRGRVGTVGYMAPEVLNN-QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVY 224 (285)
T ss_pred CCcceecCCCCcccCCCCCcCccChHHhcC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccccc
Confidence 998876543333334567888999999864 44788999999999999999999999987655444444333322 22
Q ss_pred CCCCcchhhhhhhhccccCCCCCccc
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
....+..+..+...++..++.+|++.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~ 250 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGC 250 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCC
Confidence 23455667778888899899999983
No 159
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.57 E-value=6.5e-15 Score=115.64 Aligned_cols=172 Identities=22% Similarity=0.348 Sum_probs=123.6
Q ss_pred HHHHHHhhcCChHHHHHHH--HhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~--~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-- ..++.+.+..+.. ++.++. ++|+.+++|++++|+|+++. ....++.++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~---------~lH~~~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA---------YIERMNYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCccceEEEeCCceEEeCCc
Confidence 4777788888887765321 1122222333332 355566 88988999999999999994 557889999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+..+..... .....++..|++||.... ..++...|+||+|++++++++ |..||++....+....+......+.+
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T cd05070 147 GLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCP 225 (260)
T ss_pred eeeeeccCcccccccCCCCCccccChHHHhc-CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 98876543211 112233456999998763 346789999999999999998 88999988777766666554444445
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
...+..+..+...|+..++.+||++.++.
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 226 QDCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred CcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 66777888999999999999999998875
No 160
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.56 E-value=3.8e-15 Score=122.24 Aligned_cols=150 Identities=31% Similarity=0.461 Sum_probs=115.9
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 47 IGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 47 ~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
.|-+||++|.-.|++.....-.+-+++.-...|.+- +.|.. .+|+.+.+|+|++|+|.++ ..++.++.|
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~---------~iH~~gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIE---------SIHQLGYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHH---------HHHHcCcccccCChhheeecCCCCEeecc
Confidence 355789999999998887665555666556667665 66666 7899999999999999999 578999999
Q ss_pred ccccccccC---------------C---------------------------------CCCCCcccCccccccccccccc
Q 026720 125 LGMVKEIDS---------------N---------------------------------LPCTDYVTTRWYRGPEVLLFSE 156 (234)
Q Consensus 125 ~~~a~~~~~---------------~---------------------------------~~~~~~~~~~~~~~pe~~~~~~ 156 (234)
||++..+.. . ......+|+|-|+|||++.+..
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg 364 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG 364 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence 999764321 0 0011235788899999998654
Q ss_pred CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh---hCCCCCCCCc
Q 026720 157 IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL---IGSPTKDSWP 206 (234)
Q Consensus 157 ~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~---~~~~~~~~~~ 206 (234)
|+...|.||+||+++||+.|-+||.+....+...+|... +..|+.+.-.
T Consensus 365 -Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s 416 (550)
T KOG0605|consen 365 -YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLS 416 (550)
T ss_pred -CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCccc
Confidence 999999999999999999999999999988888888753 3455554433
No 161
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.56 E-value=1.4e-15 Score=125.22 Aligned_cols=137 Identities=26% Similarity=0.435 Sum_probs=102.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.+|..|+..|++.+...--..+++..+..|... +.|+. ++|+.+++|++++|+|+++ ..+..++.|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~---------~lH~~givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAID---------AIHQLGFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEccCCCHHHEEECCCCCEEEeecc
Confidence 3677888888888776543333444444555554 66666 8899999999999999999 46778999999
Q ss_pred ccccccCCC------------------------------------CCCCcccCcccccccccccccCCCCcchHHHHHHH
Q 026720 127 MVKEIDSNL------------------------------------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAI 170 (234)
Q Consensus 127 ~a~~~~~~~------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~ 170 (234)
.+..+.... .....++++.|+|||++.+ ..|+..+|+||+||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvi 225 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVI 225 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC-CCCCCcceeccccce
Confidence 877542210 0113467889999999874 447899999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHH
Q 026720 171 MFEMLSFGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 171 l~e~~~~~~~f~~~~~~~~~~~i~~ 195 (234)
++||++|..||.+........++..
T Consensus 226 lyel~tG~~Pf~~~~~~~~~~~i~~ 250 (360)
T cd05627 226 MYEMLIGYPPFCSETPQETYRKVMN 250 (360)
T ss_pred eeecccCCCCCCCCCHHHHHHHHHc
Confidence 9999999999998877766666654
No 162
>PF13041 PPR_2: PPR repeat family
Probab=99.56 E-value=4e-15 Score=86.55 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=48.6
Q ss_pred CCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhh
Q 026720 8 PNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSK 57 (234)
Q Consensus 8 ~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~ 57 (234)
||++|||++|++|++.|++++|.+++.+|.+.|+.||..||++||.+||+
T Consensus 1 P~~~~yn~li~~~~~~~~~~~a~~l~~~M~~~g~~P~~~Ty~~li~~~~k 50 (50)
T PF13041_consen 1 PDVVTYNTLISGYCKAGKFEEALKLFKEMKKRGIKPDSYTYNILINGLCK 50 (50)
T ss_pred CchHHHHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHcC
Confidence 89999999999999999999999999999999999999999999999986
No 163
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.56 E-value=7.3e-15 Score=116.58 Aligned_cols=173 Identities=17% Similarity=0.273 Sum_probs=118.8
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|.+.+..+-. ..++...+..|... +.|+. ++|+.+++|++++|+|+++ .....+++|||
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG 154 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMS---------YLEEVRLVHRDLAARNVLVKSPNHVKITDFG 154 (279)
T ss_pred EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccccccceEEEcCCCcEEECCCC
Confidence 3566677778876543321 11222233344333 55555 8899999999999999999 45678999999
Q ss_pred ccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 127 MVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 127 ~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
.+..+..... ......+..|++||.... ..++..+|+||+|+++||+++ |..||.+....+....+-.....+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (279)
T cd05109 155 LARLLDIDETEYHADGGKVPIKWMALESILH-RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP 233 (279)
T ss_pred ceeecccccceeecCCCccchhhCCHHHhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC
Confidence 8886643211 111223456899999863 347889999999999999998 88998876655544333322223334
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..++..+..+...|+..++.+|+++.+++.
T Consensus 234 ~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 234 PICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 556777888889999999999999998864
No 164
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.56 E-value=2.7e-15 Score=129.07 Aligned_cols=178 Identities=20% Similarity=0.269 Sum_probs=136.9
Q ss_pred HHHHHHhhcCChHHHHHHHHh----h-cc---CccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----M-RE---KNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVI 120 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m-~~---~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~ 120 (234)
+||.+|+..|+|.+-.+.-.- + .. |-..+=.-++....|...+.+ +|.+.-.+|+|+-..|.++. ....
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~--YLs~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGME--YLSSHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHhCcccccchhhhhceeccceEE
Confidence 588999999999987664211 0 00 111334444555555555555 55555579999999999994 5678
Q ss_pred eEeeccccccccCCCCCC---CcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh
Q 026720 121 KIGDLGMVKEIDSNLPCT---DYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQL 196 (234)
Q Consensus 121 ~~~~~~~a~~~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~ 196 (234)
|++|||+.+.+..+-..+ .-.....|++||.+..+ .|++.+|+||+|++|||+++ |+.|+.|..+.+....|-+.
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~-kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g 721 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYG-KFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG 721 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcC-cccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC
Confidence 999999999886542211 11234568999999854 48999999999999999996 77999999999999888887
Q ss_pred hCCCCCCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 197 IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
..-+-++.++..+-.++..||...+.+||+|.+|
T Consensus 722 ~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 722 QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 7788889999999999999999999999999886
No 165
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.56 E-value=6.8e-15 Score=115.42 Aligned_cols=175 Identities=20% Similarity=0.338 Sum_probs=122.5
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..+.+.+....- ..+++..+..+... +.|+. ++|..++.|++++|+++++ .....++.++|
T Consensus 76 ~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~---------~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g 146 (262)
T cd06613 76 WIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLA---------YLHETGKIHRDIKGANILLTEDGDVKLADFG 146 (262)
T ss_pred EEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHH---------HHHhCCceecCCChhhEEECCCCCEEECccc
Confidence 3556667777777654332 22333333333332 55555 8888899999999999999 45678999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC---
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFS--EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP--- 200 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~--~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~--- 200 (234)
.+..+.... ......++..|.+||..... ..++..+|+||+|+++++|++|++||.+.........+....-.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 226 (262)
T cd06613 147 VSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKL 226 (262)
T ss_pred cchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccc
Confidence 887655422 12334566779999998643 246788999999999999999999999877655554443321111
Q ss_pred -CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 -TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
....++..+..+.+.++...+..|+++++++..
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 223456678888999999999999999999864
No 166
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.56 E-value=7.5e-15 Score=116.83 Aligned_cols=137 Identities=35% Similarity=0.594 Sum_probs=106.4
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|.++.+ ....+++.+++.+....... ......++..|++||+......++...|+||+|+++++
T Consensus 115 ~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~ 194 (288)
T cd07833 115 YCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAE 194 (288)
T ss_pred HHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHH
Confidence 7888889999999999999 46778999999988765543 23345667889999998755467899999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhCCCCC-------------------------------CCCcchhhhhhhhccccCCC
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIGSPTK-------------------------------DSWPLGIQLASNLNWKLPQM 222 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~ 222 (234)
+++|.+||++....+.+.++....+...+ ...+..+..+++.|+..++.
T Consensus 195 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 274 (288)
T cd07833 195 LLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPK 274 (288)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCch
Confidence 99999999988777776665543332111 01144566777889999999
Q ss_pred CCccccccCCC
Q 026720 223 GGVNLLAVMPS 233 (234)
Q Consensus 223 ~~~~~~~~~~~ 233 (234)
+|+++++++..
T Consensus 275 ~Rps~~~il~~ 285 (288)
T cd07833 275 ERLTCDELLQH 285 (288)
T ss_pred hcccHHHHhcC
Confidence 99999998864
No 167
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.56 E-value=5.5e-15 Score=115.84 Aligned_cols=175 Identities=17% Similarity=0.259 Sum_probs=124.2
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..+.+.+...... .++.+.+..+.. ++.|+. ++|..++.|++++|.++.+ .++..+++||
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~---------~lH~~~i~H~dl~p~ni~i~~~~~~kl~df 144 (256)
T cd05059 74 IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAME---------YLESNGFIHRDLAARNCLVGEDNVVKVSDF 144 (256)
T ss_pred eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHHHCCcccccccHhhEEECCCCcEEECCc
Confidence 457777888888776543211 111122223322 255556 8899899999999999999 4677899999
Q ss_pred cccccccCCCCC--CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLPC--TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+......... .....+..|.+||...+ ..++...|+||+|+++|++++ |..||.+....+....+......+.+
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd05059 145 GLARYVLDDQYTSSQGTKFPVKWAPPEVFDY-SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRP 223 (256)
T ss_pred ccceecccccccccCCCCCCccccCHHHhcc-CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence 988765432111 11122346899998864 447889999999999999998 78999877766666555544444555
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..++..+..+...|+...+.+|+++++++..
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 6678889999999999999999999998753
No 168
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.56 E-value=7.2e-15 Score=115.32 Aligned_cols=173 Identities=19% Similarity=0.220 Sum_probs=120.1
Q ss_pred HHHHHHhhcCChHHHHHH-HHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKV-FNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~-~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|.+.+.... ...++.+.+..+... +.|+. ++|..+++|++++|+++++ .....++.+||
T Consensus 70 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg 140 (257)
T cd05115 70 MLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMK---------YLEGKNFVHRDLAARNVLLVNQHYAKISDFG 140 (257)
T ss_pred EEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH---------HHHhcCeeecccchheEEEcCCCcEEeccCC
Confidence 577788888888765432 111222233333332 44555 7898899999999999999 45678999999
Q ss_pred ccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 127 MVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 127 ~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
.+........ ......+..|++||.... ..++...|+||+|++++++++ |..||.+....+....+......+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 219 (257)
T cd05115 141 LSKALGADDSYYKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDC 219 (257)
T ss_pred ccccccCCccceeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCC
Confidence 8875433211 111112346899998763 346789999999999999996 9999998877666544443333333
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+...+..+..++..||...+.+|+++.++.+
T Consensus 220 ~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 3455678888999999999999999998754
No 169
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.56 E-value=1.5e-14 Score=113.66 Aligned_cols=173 Identities=21% Similarity=0.313 Sum_probs=121.9
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-.. .++...+..+... +.|+. ++|..+++|++++|.|+++ .....++++|
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dl~p~Nil~~~~~~~~l~df 147 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMA---------YLEAQNYIHRDLAARNVLVGENNICKVADF 147 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeeccCCcceEEEcCCCCEEECCc
Confidence 57777887787776543211 1111122222222 44444 7888899999999999999 4567899999
Q ss_pred cccccccCCCCC--CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLPC--TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+......... .+......|++||...+ ..++...|+||+|++++++++ |+.||++.........+.+....+.+
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 226 (261)
T cd05068 148 GLARVIKEDIYEAREGAKFPIKWTAPEAALY-NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCP 226 (261)
T ss_pred ceEEEccCCcccccCCCcCceeccCcccccc-CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 988776532111 11112246899998863 447889999999999999998 99999987766666555444444555
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..+++.+..+...|+...+.+||++.+++.
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 667788889999999999999999998764
No 170
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.56 E-value=1.2e-14 Score=116.16 Aligned_cols=137 Identities=37% Similarity=0.616 Sum_probs=107.4
Q ss_pred HhhhcccccCCcCCCcEEee--CCeeeEeeccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|.++++. ....++.+||.+....... .......++.|.+||.+.+...++...|+||+|+++++
T Consensus 125 ~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~ 204 (295)
T cd07837 125 HCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAE 204 (295)
T ss_pred HHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHH
Confidence 78888999999999999994 5678999999887653321 11222456679999988755567899999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC---------------------------cchhhhhhhhccccCCCCCcc
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIGSPTKDSW---------------------------PLGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~ 226 (234)
+++|..||++........++++..+.|....| +..+..++..++...+.+|++
T Consensus 205 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~ 284 (295)
T cd07837 205 MSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS 284 (295)
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC
Confidence 99999999999888888888776665544333 344555677788889999999
Q ss_pred ccccCCC
Q 026720 227 LLAVMPS 233 (234)
Q Consensus 227 ~~~~~~~ 233 (234)
+.+++.+
T Consensus 285 ~~eil~~ 291 (295)
T cd07837 285 AKAALTH 291 (295)
T ss_pred HHHHhcC
Confidence 9998864
No 171
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.56 E-value=8.6e-15 Score=116.94 Aligned_cols=174 Identities=23% Similarity=0.304 Sum_probs=121.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHh--------hc-c-CccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCcCCC
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL--------MR-E-KNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDLKPS 111 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~--------m~-~-~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l~p~ 111 (234)
..++..|+..|.+.+....... .+ . ....++... +.++. ++|..+++|++++|.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~---------~lH~~~i~H~dlkp~ 152 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMV---------YLASQHFVHRDLATR 152 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeecccCcc
Confidence 4677788888988876543210 00 0 111233322 44555 889999999999999
Q ss_pred cEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCCh
Q 026720 112 NLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSS 186 (234)
Q Consensus 112 ~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~ 186 (234)
|+++ .....++.++|.+........ .....++..|++||...+ ..++...|+||+|++++|+++ |..||.+...
T Consensus 153 Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 231 (291)
T cd05094 153 NCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 231 (291)
T ss_pred eEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999 467789999998876543211 112334567999998864 447888999999999999998 9999987766
Q ss_pred HHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 187 ADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+....+...........++..+..+...|+...+.+|+++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 232 TEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 5554444332222333455677888999999999999999998764
No 172
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.56 E-value=8.1e-15 Score=115.13 Aligned_cols=173 Identities=21% Similarity=0.341 Sum_probs=122.3
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+..+-... ++.+.+..+... +.|+. ++|+.+++|++++|+|+++ .....++.+|
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~---------~lH~~~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMA---------YIERMNYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEeecccCcceEEEcCCCeEEECCC
Confidence 477778888887765432110 111222333322 44555 7888899999999999999 4567899999
Q ss_pred cccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
|.+....... .......+..|.+||...+ ..++...|+||+|++++++++ |..||++....+....+.+....+..
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T cd05069 147 GLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCP 225 (260)
T ss_pred ccceEccCCcccccCCCccchhhCCHHHhcc-CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 9887654321 1112233456899998764 336789999999999999998 89999988777666555544344445
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..+...|+..++.+|++++++++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 226 QGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 566788899999999999999999988753
No 173
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.56 E-value=9.6e-15 Score=116.16 Aligned_cols=175 Identities=30% Similarity=0.490 Sum_probs=120.2
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+++....-..+....+..+.. ++.++. ++|+.++.|++++|+++.+ .....++.+++.
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIE---------FCHSHNIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HHHHCCccccCCCHHHEEECCCCcEEEEeeee
Confidence 45566677666665432111111112222222 244454 7888899999999999999 466789999998
Q ss_pred cccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC------
Q 026720 128 VKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP------ 200 (234)
Q Consensus 128 a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~------ 200 (234)
+..+.... ......++..|.+||+..+...++...|+||+|++++++++|+++|++....+...++....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07846 147 ARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE 226 (286)
T ss_pred eeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH
Confidence 87654422 22334567789999998655556788999999999999999999999887766666655432221
Q ss_pred --------------C----------CCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 --------------T----------KDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 --------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. ....+..+..+...|+...+.+|+++.+++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 1 01234567778888999999999999998764
No 174
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.56 E-value=1.9e-15 Score=122.68 Aligned_cols=168 Identities=23% Similarity=0.233 Sum_probs=113.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+..-..--..+++..+..|... +.|+. ++|..+++|++++|.|+++ ..+..++.|||
T Consensus 71 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~---------~lH~~givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 71 LYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALG---------YLHSINIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeecCCCHHHeEECCCCCEEEeecC
Confidence 3577788888888654332222333344444443 66777 8999999999999999999 46778999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+....... ......+++.|++||++.+ ..++..+|+||+|+++++|++|..||.+....+....+........+ ..
T Consensus 142 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~-~~ 219 (325)
T cd05604 142 LCKEGIAQSDTTTTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP-GA 219 (325)
T ss_pred CcccCCCCCCCcccccCChhhCCHHHHcC-CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC-CC
Confidence 887643221 2234567888999999864 44788999999999999999999999987766665555543222222 22
Q ss_pred cchhhhhhhhccccCCCCCccc
Q 026720 206 PLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
+..+..+.+.+....+.+|++.
T Consensus 220 ~~~~~~ll~~ll~~~p~~R~~~ 241 (325)
T cd05604 220 SLTAWSILEELLEKDRQRRLGA 241 (325)
T ss_pred CHHHHHHHHHHhccCHHhcCCC
Confidence 3344444444555555555544
No 175
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.56 E-value=4.3e-15 Score=118.66 Aligned_cols=169 Identities=20% Similarity=0.325 Sum_probs=128.5
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccc-cHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQ-SWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~-~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
+|++|+..|.+-+-+.--..++++... .|-.++++.. +.|+..++|++++..|+++ .++..++.|||+.
T Consensus 130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVh---------YCHknrVvHRDLKLENILLD~N~NiKIADFGLS 200 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVH---------YCHKNRVVHRDLKLENILLDQNNNIKIADFGLS 200 (668)
T ss_pred EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHH---------HHhhccceecccchhheeecCCCCeeeeccchh
Confidence 677888888877665555555554333 3444466666 7888889999999999999 4567899999998
Q ss_pred ccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC-CCCCCCcc
Q 026720 129 KEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS-PTKDSWPL 207 (234)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~-~~~~~~~~ 207 (234)
..........++++++.|.+||++++.+.-..-+|.||+|+++|.+..|.+||+|.++.....+|.+.--. |...+
T Consensus 201 Nly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PS--- 277 (668)
T KOG0611|consen 201 NLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPS--- 277 (668)
T ss_pred hhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCc---
Confidence 88777666678899999999999998887789999999999999999999999999888888777664332 33222
Q ss_pred hhhhhhhhccccCCCCCccccccC
Q 026720 208 GIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
--..+++......+..|-++++|-
T Consensus 278 dA~gLIRwmLmVNP~RRATieDiA 301 (668)
T KOG0611|consen 278 DASGLIRWMLMVNPERRATIEDIA 301 (668)
T ss_pred hHHHHHHHHHhcCcccchhHHHHh
Confidence 224455555566666677777654
No 176
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.56 E-value=9.5e-15 Score=114.99 Aligned_cols=171 Identities=17% Similarity=0.184 Sum_probs=115.3
Q ss_pred HHHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CC-------
Q 026720 49 TALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KG------- 118 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~------- 118 (234)
..++..|+..|.++...... ..+.......+... +.|+. ++|+.+++|++++|+|+++. ..
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~---------~lH~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALS---------YLEDKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HhhhCCeECCCCCcccEEEecCCccCCCCc
Confidence 45777888888876543221 11222222333333 45555 88999999999999999994 22
Q ss_pred eeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHhh
Q 026720 119 VIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML-SFGILFPGKSSADQIYKICQLI 197 (234)
Q Consensus 119 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~-~~~~~f~~~~~~~~~~~i~~~~ 197 (234)
..++.++|.+...... ....++..|++||.+.....++..+|+||+|+++||++ .|..||.+....+. .+... .
T Consensus 150 ~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~~-~ 224 (262)
T cd05077 150 FIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFYE-G 224 (262)
T ss_pred eeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHHh-c
Confidence 2678888877655432 23456677999998865566888999999999999998 57788876543332 22222 1
Q ss_pred CCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 198 GSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+.....+..+..++..|+..++.+||+|.+|+..
T Consensus 225 ~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 225 QCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 222223344567788899999999999999998764
No 177
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.56 E-value=8.8e-15 Score=115.26 Aligned_cols=173 Identities=19% Similarity=0.303 Sum_probs=124.6
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.++..|+..|.+++...-.. .++.+.+..+... +.|+. ++|+.++.|++++|.|+++. ....++.+|+
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~Lh~~~i~H~di~p~nili~~~~~~~l~dfg 151 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMK---------YLSEMNYVHRDLAARNILVNSNLVCKVSDFG 151 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCCCcceEEEcCCCCEEECccc
Confidence 46777888888877654311 1222233333322 45555 88999999999999999994 5678999999
Q ss_pred ccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 127 MVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 127 ~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
.+....... .......+..|.+||...+ ..++...|+||+|++++++++ |..||.+.........+.+....+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (266)
T cd05033 152 LSRRLEDSEATYTTKGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPP 230 (266)
T ss_pred hhhcccccccceeccCCCCCccccChhhhcc-CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 888764211 1111223456899998863 447889999999999999997 88999877666655555444445666
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..+++.+..+...|+...+.+||++++++.
T Consensus 231 ~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 231 MDCPSALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 778889999999999999999999999864
No 178
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.55 E-value=9.4e-15 Score=115.37 Aligned_cols=175 Identities=19% Similarity=0.297 Sum_probs=124.3
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-.. .+++..+..+.. ++.|+. ++|+.+++|++++|.++++ .....++.||
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~---------~LH~~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS---------HLHQHKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH---------HHHHCCCccCCCCHHHEEECCCCCEEEccC
Confidence 47778888888877654321 122222233333 356666 8899999999999999999 4567899999
Q ss_pred cccccccCCC-CCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh-CC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI-GS 199 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~-~~ 199 (234)
|.+....... ......++..|++||++.. ...|+...|+||+|+++||+++|+.||.+.........+.... ..
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 235 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPR 235 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCC
Confidence 9987654322 1233456778999998752 2246788999999999999999999998766555444443321 12
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.....++..+..+...|+..++.+|+++.+++.+
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 236 LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 2234567788889999999999999999998764
No 179
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.55 E-value=2.1e-14 Score=118.88 Aligned_cols=135 Identities=20% Similarity=0.348 Sum_probs=102.0
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|++++|.|+++. ....+++|||.+........ ......+..|++||...+ ..++...|+||+|++++
T Consensus 229 ~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDi~slG~~l~ 307 (375)
T cd05104 229 FLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGILLW 307 (375)
T ss_pred HHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcC-CCCCCCCCHHHHHHHHH
Confidence 78888999999999999994 55689999999886543211 111223456999999864 44789999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhC-CCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIG-SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||++........+...... ...+...+..+..++..|+..++.+||++.+++.
T Consensus 308 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 308 EIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred HHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 9997 8899988766555555544332 2223344567888899999999999999999874
No 180
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.55 E-value=2.5e-15 Score=129.49 Aligned_cols=176 Identities=19% Similarity=0.245 Sum_probs=134.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
.|+++||++|.+.+.+.- +.. +-.+-..+|..+++..+...++|.....++|||+|..|+++ ..+.-++||||.|
T Consensus 118 llLmEyC~gg~Lvd~mn~--Rlq--~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNT--RLQ--TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EeehhhccCCcHHHHHHH--HHh--ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 478899999988876432 111 22677778888888888888778778789999999999999 4677899999998
Q ss_pred ccccCCCCCC----------CcccCccccccccccc--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh
Q 026720 129 KEIDSNLPCT----------DYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL 196 (234)
Q Consensus 129 ~~~~~~~~~~----------~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~ 196 (234)
.......... .-..++.|++||.+.- +...+.++|||++||+||.++.+..||.+.+..-++. ..
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIln---g~ 270 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILN---GN 270 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEe---cc
Confidence 7654432110 0124678999999732 2335799999999999999999999999776554432 24
Q ss_pred hCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 197 IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...|+...|...+..|++.+..-.+.+|+++..++.
T Consensus 271 Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 271 YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLE 306 (738)
T ss_pred ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 556777788899999999999999999999887653
No 181
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.55 E-value=8.5e-15 Score=114.93 Aligned_cols=171 Identities=17% Similarity=0.200 Sum_probs=115.7
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CC-------
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KG------- 118 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~------- 118 (234)
..+|..|+..|.+.+..+--. .++......+... +.|+. ++|+.+++|++++|.++++. +.
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~iiH~dlkp~nili~~~~~~~~~~~ 144 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALH---------FLEDKGLTHGNVCAKNVLLIREEDRKTGNP 144 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCccceEEEecccccccCCC
Confidence 347778899998877643211 1222222233222 45555 88999999999999999994 21
Q ss_pred -eeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHh
Q 026720 119 -VIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFG-ILFPGKSSADQIYKICQL 196 (234)
Q Consensus 119 -~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~-~~f~~~~~~~~~~~i~~~ 196 (234)
+.++++++.+..... .....++..|++||.+.+...++...|+||+|++++++++|. .||........ ..+...
T Consensus 145 ~~~~l~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~ 220 (258)
T cd05078 145 PFIKLSDPGISITVLP---KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQFYED 220 (258)
T ss_pred ceEEecccccccccCC---chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HHHHHc
Confidence 357888887765433 122456677999999875556788999999999999999985 56555444332 333333
Q ss_pred hCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 197 IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
....+...| ..+..+...|+...+.+|+++++++..
T Consensus 221 ~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 221 RHQLPAPKW-TELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred cccCCCCCc-HHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 222222333 467788888999999999999998764
No 182
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.55 E-value=1e-14 Score=115.85 Aligned_cols=174 Identities=20% Similarity=0.298 Sum_probs=118.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+...--..++...+..|... +.|+. ++|+.+++|++++|.|+++ .+...++.|||
T Consensus 72 ~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~---------~lH~~~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 72 LSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLE---------HMHNRFVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCEEcCCCCHHHEEECCCCCEEEccCc
Confidence 3467788888888765432222333344444444 55666 8899999999999999999 46678999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhhCCCCCCC
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSS--ADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~--~~~~~~i~~~~~~~~~~~ 204 (234)
.+..+... ......++..|++||.......++..+|+||+|++++++++|+.||.+... .....+........-+..
T Consensus 143 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (278)
T cd05606 143 LACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 221 (278)
T ss_pred CccccCcc-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCc
Confidence 88765432 223346788899999986444578899999999999999999999987632 222222222212222233
Q ss_pred CcchhhhhhhhccccCCCCCc-----cccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
++..+..+...+...++..|+ +..++++
T Consensus 222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 456666777777777777777 7766654
No 183
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.55 E-value=6.2e-15 Score=115.38 Aligned_cols=174 Identities=23% Similarity=0.440 Sum_probs=126.2
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|++.+...... ..++..+..|... +.|+. ++|+.++.|++++|+++++ .....++.+|
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~---------~lH~~~i~H~dl~p~nili~~~~~~~l~df 144 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQ---------HIHEKRVLHRDIKSKNIFLTQNGKVKLGDF 144 (255)
T ss_pred EEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH---------HHhhCCcccCCCCcceEEECCCCcEEEccc
Confidence 46677888887766443211 1122233344333 56666 8899899999999999999 4567889999
Q ss_pred cccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
|.+........ .....++..|++||+..+ ..++...|+||+|++++++++|..||.+.........+......+.+..
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (255)
T cd08219 145 GSARLLTSPGAYACTYVGTPYYVPPEIWEN-MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSH 223 (255)
T ss_pred CcceeecccccccccccCCccccCHHHHcc-CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcc
Confidence 98876543221 223456778999999864 3468899999999999999999999987766555555554434444566
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
++..+..+...++...+.+|+++.+++..
T Consensus 224 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 224 YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 77788888899999999999999999864
No 184
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.55 E-value=2.5e-14 Score=115.51 Aligned_cols=137 Identities=31% Similarity=0.548 Sum_probs=101.2
Q ss_pred HhhhcccccCCcCCCcEEee-----CCeeeEeeccccccccCCC----CCCCcccCcccccccccccccCCCCcchHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-----KGVIKIGDLGMVKEIDSNL----PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAM 167 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-----~~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~ 167 (234)
++|+.+++|++++|+|+++. ....+++|||.+....... ......++..|++||++.+...++...|+||+
T Consensus 123 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 202 (317)
T cd07867 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAI 202 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhH
Confidence 88999999999999999982 3468999999988654322 12234567889999998765668899999999
Q ss_pred HHHHHHHHhCCCCCCCCC---------hHHHHHHHHHhhCCCCCCCCcc-------------------------------
Q 026720 168 GAIMFEMLSFGILFPGKS---------SADQIYKICQLIGSPTKDSWPL------------------------------- 207 (234)
Q Consensus 168 g~~l~e~~~~~~~f~~~~---------~~~~~~~i~~~~~~~~~~~~~~------------------------------- 207 (234)
|++++|+++|++||.+.. ..+++.+++..++.+....|..
T Consensus 203 G~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (317)
T cd07867 203 GCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKH 282 (317)
T ss_pred HHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcc
Confidence 999999999999997532 2345555666666555444432
Q ss_pred ------hhhhhhhhccccCCCCCccccccCCC
Q 026720 208 ------GIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 208 ------~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+...+...++.+|+|.++++.+
T Consensus 283 ~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 283 KVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred cCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 12234555778899999999998864
No 185
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.55 E-value=7.5e-15 Score=115.02 Aligned_cols=171 Identities=20% Similarity=0.334 Sum_probs=119.4
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+..+--.. ++.+.+..+.. ++.|+. ++|..+++|++++|.|+++ .+...+++||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dlkp~nil~~~~~~~kl~df 146 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME---------YLEANNFVHRDLAARNVLVSEDNVAKVSDF 146 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEeccccchheEEEcCCCcEEecCC
Confidence 466777777877765332110 11112222222 245555 8898899999999999999 4677899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
|.+....... .....+..|++||+.. ...++...|+||+|++++++++ |+.||+.....+....+.+.........
T Consensus 147 g~~~~~~~~~--~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd05082 147 GLTKEASSTQ--DTGKLPVKWTAPEALR-EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 223 (256)
T ss_pred ccceeccccC--CCCccceeecCHHHHc-cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence 9887654321 2223345799999886 3447889999999999999997 8899987665555544544333333456
Q ss_pred CcchhhhhhhhccccCCCCCccccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+..+..+...|+...+.+|+++.+++.
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 224 CPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6778888899999999999999998864
No 186
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.55 E-value=1.8e-14 Score=114.57 Aligned_cols=135 Identities=22% Similarity=0.293 Sum_probs=106.9
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|++++|.|+++. ....+++|||.++.+..... ......++.|++||...+. .++...|+||+|++++
T Consensus 139 ~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~ 217 (283)
T cd05091 139 FLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYG-KFSIDSDIWSYGVVLW 217 (283)
T ss_pred HHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcC-CCCcchhHHHHHHHHH
Confidence 78999999999999999984 56689999998876543221 1223345679999998643 3788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||.+....+....+.+....+.+...+..+..+...|+...+..||++.+|+.
T Consensus 218 el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 218 EVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9997 78899887777666666655555556677888899999999999999999999865
No 187
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.55 E-value=9.5e-15 Score=115.15 Aligned_cols=173 Identities=18% Similarity=0.306 Sum_probs=123.6
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|.+.+...-- ..++...+..+... +.|+. ++|..++.|++++|.|+++ .+...++.+||
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~---------~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg 152 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMK---------YLSDMNYVHRDLAARNILVNSNLECKVSDFG 152 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccccchhhEEEcCCCcEEECCCc
Confidence 4777888888887754321 11122222222222 44555 7888899999999999999 45678899999
Q ss_pred ccccccCCCCCC----CcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 127 MVKEIDSNLPCT----DYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 127 ~a~~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
.+.......... ....+..|.+||...+ ..++...|+||+|++++|+++ |..||......+....+.+....|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~ 231 (268)
T cd05063 153 LSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY-RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPA 231 (268)
T ss_pred cceecccccccceeccCCCcCceecCHHHhhc-CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCC
Confidence 887654321110 1112345899998864 447889999999999999997 9999987777666666665555666
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
....+..+..+...|+..++.+||+++++++
T Consensus 232 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 232 PMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6677788888999999999999999998864
No 188
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.55 E-value=2.2e-14 Score=112.54 Aligned_cols=174 Identities=19% Similarity=0.323 Sum_probs=126.2
Q ss_pred HHHHHHhhcCChHHHHHHHHh----hccCccccHHH-HHHHHHhcCCchhhhHhh-----hcccccCCcCCCcEEee-CC
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTI-MISGLADNSRGNDAISLH-----RQGYFHRDLKPSNLLVS-KG 118 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~-----~~~~~~~~l~p~~~~~~-~~ 118 (234)
.++..|+..|.+.+..+-... ++...+..|.. ++.|+. ++| ..+++|++++|.++++. ..
T Consensus 77 ~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~---------~lH~~~~~~~~i~h~dl~p~nili~~~~ 147 (265)
T cd08217 77 YIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALY---------ECHNRSDPGNTVLHRDLKPANIFLDANN 147 (265)
T ss_pred EEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHH---------HHhcCccccCcceecCCCHHHEEEecCC
Confidence 577888888888877654321 22223333433 355666 788 77899999999999994 57
Q ss_pred eeeEeeccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh
Q 026720 119 VIKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI 197 (234)
Q Consensus 119 ~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~ 197 (234)
..++.+++.+........ .....++..|.+||.+.. ..++...|+||+|++++++++|..||.+.........+....
T Consensus 148 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~ 226 (265)
T cd08217 148 NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNH-MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK 226 (265)
T ss_pred CEEEecccccccccCCcccccccccCCCccChhhhcC-CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC
Confidence 789999998887654332 334566778999999864 336788999999999999999999999776444443343333
Q ss_pred CCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 198 GSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+.+..++..+..+...++...+.+|+++.+|+..
T Consensus 227 ~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 333445667788888888999999999999998763
No 189
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.55 E-value=8.5e-15 Score=119.16 Aligned_cols=176 Identities=26% Similarity=0.348 Sum_probs=118.6
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..+|..|+..|++.+...-+. .+++..+..|... +.|+. ++|..+++|++++|+|+++ .....++.||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~ivH~dlkp~Nill~~~~~~kl~Df 146 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAID---------SVHQLGYVHRDIKPDNVLLDKNGHIRLADF 146 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeEECCCCHHHEEECCCCCEEEEEC
Confidence 467888998899887665432 2444444555444 66777 8999999999999999999 4677899999
Q ss_pred cccccccCCCC--CCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
|.+..+..... .....+++.|++||++.. ...++..+|+||+|++++++++|+.||.+....+...++......
T Consensus 147 g~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~ 226 (331)
T cd05597 147 GSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEH 226 (331)
T ss_pred CceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc
Confidence 98876543221 122357889999999852 234678899999999999999999999988776666665543221
Q ss_pred ---CC-CCCCcchhhhhhhhccccCC--CCCccccccCCC
Q 026720 200 ---PT-KDSWPLGIQLASNLNWKLPQ--MGGVNLLAVMPS 233 (234)
Q Consensus 200 ---~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 233 (234)
++ ....++....+++.....++ ..|+++++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 227 FQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 11 12234445555433222232 336677766653
No 190
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.55 E-value=1e-14 Score=115.88 Aligned_cols=175 Identities=19% Similarity=0.273 Sum_probs=124.1
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+....... +++..+..+.. ++.++. ++|..+++|++++|.++++ .....++.++
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~---------~LH~~~ivH~dl~~~nili~~~~~~~l~df 165 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLA---------HLHAHKVIHRDIKGQNVLLTENAEVKLVDF 165 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEECCCCCEEEeeC
Confidence 588889998888876543221 11111222222 355666 8899999999999999999 4567899999
Q ss_pred cccccccCCC-CCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh-CC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI-GS 199 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~-~~ 199 (234)
+.+....... ......++..|++||.+.. ...++..+|+||+|++++|+++|..||.+.........+.+.. ..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 245 (282)
T cd06636 166 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPK 245 (282)
T ss_pred cchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCC
Confidence 9887654321 1233456778999998742 2346788999999999999999999998766544443332211 11
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.....++..+..+++.|+..++.+|+++.+++..
T Consensus 246 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 246 LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 2234577888999999999999999999999864
No 191
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.55 E-value=8.9e-15 Score=120.08 Aligned_cols=170 Identities=23% Similarity=0.326 Sum_probs=115.9
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
+|..|+..|.+..... ..+..+..+.. ++.|+. ++|..+++|+|++|.|+++ .....++.|||.+
T Consensus 149 lv~e~~~~~~L~~~~~----~~~~~~~~i~~qi~~aL~---------~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTHI----ADEQFLADVARQILSGIA---------YLHRRHIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCccccccc----CCHHHHHHHHHHHHHHHH---------HHHHCCEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 5667777776643211 11112222322 355666 8899999999999999999 4567899999998
Q ss_pred ccccCCC-CCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--hHHHHHH-HHHhhCCC
Q 026720 129 KEIDSNL-PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKS--SADQIYK-ICQLIGSP 200 (234)
Q Consensus 129 ~~~~~~~-~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~--~~~~~~~-i~~~~~~~ 200 (234)
..+.... ......++..|++||.+.. ...++..+|+||+|+++||+++|+.||.... .+..... +.......
T Consensus 216 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 295 (353)
T PLN00034 216 RILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPE 295 (353)
T ss_pred eecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCC
Confidence 8765432 2234567889999998742 1223468999999999999999999997432 3332222 11111222
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.....+..+..++..|+..++.+|+++.+++.+
T Consensus 296 ~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 296 APATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 234566778888999999999999999999864
No 192
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.55 E-value=2.2e-14 Score=118.38 Aligned_cols=171 Identities=22% Similarity=0.311 Sum_probs=117.4
Q ss_pred HHHHHhhcCChHHHHHHHHh---hccCcc-ccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeCCeeeEeecc
Q 026720 51 LVEMYSKCGHVEKAFKVFNL---MREKNL-QSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSKGVIKIGDLG 126 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~---m~~~~~-~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 126 (234)
.+.+.+++|+.|-+.-+-.. ++.--+ .-|-.|+-+.- .+|.++++|.|++|.|.++..+..++.|||
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~---------~IH~~gIVHSDLKPANFLlVkG~LKLIDFG 504 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVK---------TIHQHGIVHSDLKPANFLLVKGRLKLIDFG 504 (677)
T ss_pred eEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHH---------HHHHhceeecCCCcccEEEEeeeEEeeeec
Confidence 44455666766555332211 111111 23444455555 789999999999999999988999999999
Q ss_pred ccccccCCC---CCCCcccCcccccccccccccC----------CCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 026720 127 MVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEI----------YGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKI 193 (234)
Q Consensus 127 ~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~----------~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i 193 (234)
.|..+.... .....+|+..|++||.++.+.. .+..+|+||+||++|+|+.|++||..-. ....++
T Consensus 505 IA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl 582 (677)
T KOG0596|consen 505 IANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKL 582 (677)
T ss_pred hhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHH
Confidence 999875432 2345689999999999864321 2478999999999999999999995432 222233
Q ss_pred HHhhCCCCC------CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 194 CQLIGSPTK------DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 194 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.. +-.|+. -+-+..+..+++-|...++.+|+++.+++++
T Consensus 583 ~a-I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 583 HA-ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred Hh-hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 22 223322 1212236777888999999999999999875
No 193
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.55 E-value=1.1e-14 Score=115.59 Aligned_cols=135 Identities=23% Similarity=0.312 Sum_probs=103.4
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|++++|+++++ .....++.+||.+........ ......+..|.+||...+ ..++...|+||+|++++
T Consensus 137 ~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ 215 (280)
T cd05092 137 YLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDIWSFGVVLW 215 (280)
T ss_pred HHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhHHHHHHHHH
Confidence 7898999999999999999 456789999998876543211 111223456899998864 34788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |.+||.+....+....+........+...+..+..+...|+..++.+|+++++++.
T Consensus 216 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 216 EIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9998 88999887776666555444333444556678888999999999999999998864
No 194
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.55 E-value=1.7e-14 Score=117.53 Aligned_cols=175 Identities=31% Similarity=0.527 Sum_probs=123.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+. |.+.+...--..++...+..+... +.|+. ++|..+++|++++|.++++ .....++.+|+
T Consensus 95 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~---------~LH~~~i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 95 INLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLN---------VLHKWYFMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence 445666665 555554332112233333444444 56666 8899999999999999999 45678899999
Q ss_pred ccccccCC---------------CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 026720 127 MVKEIDSN---------------LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIY 191 (234)
Q Consensus 127 ~a~~~~~~---------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~ 191 (234)
.+...... .......++..|.+||.+.+...++...|+||+|++++++++|.+||++....+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 244 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG 244 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 87765410 011122346679999998755557889999999999999999999999999888888
Q ss_pred HHHHhhCCCCCCCCc---------------------------chhhhhhhhccccCCCCCccccccCCC
Q 026720 192 KICQLIGSPTKDSWP---------------------------LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 192 ~i~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++...+.|....|+ ..+..+...++...+.+|+++++++..
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 888777666555443 334455666778889999999998864
No 195
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.55 E-value=7.2e-15 Score=118.12 Aligned_cols=174 Identities=19% Similarity=0.275 Sum_probs=117.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHh----------------hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCC
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL----------------MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPS 111 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~----------------m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~ 111 (234)
..++..|+..|.+.+..+.-.. ++.+.+..+... +.|+. ++|+.+++|++++|+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~---------~LH~~gi~H~dlkp~ 153 (303)
T cd05088 83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD---------YLSQKQFIHRDLAAR 153 (303)
T ss_pred ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHH---------HHHhCCccccccchh
Confidence 4567778888888776442211 111122333332 45555 789999999999999
Q ss_pred cEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 026720 112 NLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQ 189 (234)
Q Consensus 112 ~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~ 189 (234)
|+++ .....++.+||.+..............+..|.+||...+ ..++..+|+||+|++++|+++ |..||.+....+.
T Consensus 154 Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 232 (303)
T cd05088 154 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 232 (303)
T ss_pred eEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHH
Confidence 9999 466789999998864332111111122345899998864 347889999999999999998 9999987766555
Q ss_pred HHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 190 IYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 190 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+-.....+.+...+..+..+...|+...+.+|+++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 275 (303)
T cd05088 233 YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 275 (303)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 4444322222223344567778888899999999999998764
No 196
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.54 E-value=1.8e-14 Score=117.34 Aligned_cols=173 Identities=26% Similarity=0.355 Sum_probs=119.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhc-ccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQ-GYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~-~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
-.++..|+..|++.+..+--..++...+..+... +.|+. ++|.. +++|++++|+|+++ .....++.||
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~~ivH~dlkp~Nili~~~~~~kL~Df 148 (333)
T cd06650 78 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT---------YLREKHKIMHRDVKPSNILVNSRGEIKLCDF 148 (333)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhcCCEEecCCChhhEEEcCCCCEEEeeC
Confidence 3477888988998876543222333333334333 55555 78864 58999999999999 4567899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-----------
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKIC----------- 194 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~----------- 194 (234)
|.+..+.... .....++..|++||.+.+ ..++...|+||+|++++++++|+.||+.....+.. .+.
T Consensus 149 g~~~~~~~~~-~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~ 225 (333)
T cd06650 149 GVSGQLIDSM-ANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAES 225 (333)
T ss_pred Ccchhhhhhc-cccCCCCccccCHHHhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCcccc
Confidence 9887664432 233467788999999864 44788999999999999999999999865432221 111
Q ss_pred ------------------------------Hhh-CCC----CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 195 ------------------------------QLI-GSP----TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 195 ------------------------------~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
... ..+ .....+..+..+...|+..++.+|+++++++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 226 ETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 100 000 011234567788899999999999999999764
No 197
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.54 E-value=1.3e-14 Score=114.45 Aligned_cols=175 Identities=20% Similarity=0.286 Sum_probs=125.4
Q ss_pred HHHHHHhhcCChHHHHHHHH----hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFN----LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~----~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.++..|+..+.+.+..+... .+.+..+..+.. ++.|+. ++|+.+++|++++|+++.+ .....++.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~---------~lH~~~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLA---------YLHENKVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH---------HHhcCCcccCCCCHHHEEEccCCeEEEC
Confidence 47778888888887765433 122222233333 356666 8899899999999999999 46678999
Q ss_pred eccccccccCCCC-CCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC
Q 026720 124 DLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG 198 (234)
Q Consensus 124 ~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~ 198 (234)
+++.+........ .....++..|++||.+.. ...++...|+||+|++++++++|.+||.+........++.....
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 235 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP 235 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCC
Confidence 9998876543222 223456778999998743 22467789999999999999999999987666665555443222
Q ss_pred C--CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 S--PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. .....|+..+..+++.|+..++.+|+++++++..
T Consensus 236 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 236 PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1 1223477788899999999999999999998764
No 198
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.54 E-value=1.5e-14 Score=114.94 Aligned_cols=174 Identities=30% Similarity=0.546 Sum_probs=124.4
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.+|..|+ .+++.+...... .+.+..+..+.. ++.++. ++|+.++.|++++|+++++. ....++.+++
T Consensus 75 ~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg 144 (286)
T cd07832 75 VLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVA---------YMHANGIMHRDLKPANLLISADGVLKIADFG 144 (286)
T ss_pred EEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCcCHHHEEEcCCCcEEEeeee
Confidence 5677777 777776543221 122223333333 356666 88988999999999999994 5678899999
Q ss_pred ccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 127 MVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 127 ~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
.+....... ......++..|.+||.+.....++...|+||+|++++++++|.++|++..+.....++....+.+....
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (286)
T cd07832 145 LARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEET 224 (286)
T ss_pred ecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHH
Confidence 887664432 122345677899999986555578899999999999999999999998888777777776655543322
Q ss_pred C-----------------------------cchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 W-----------------------------PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
| +..+..+.+.+....+.+|+++++++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 225 WPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 2 2344456667778899999999998865
No 199
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.54 E-value=1.6e-14 Score=116.02 Aligned_cols=173 Identities=18% Similarity=0.320 Sum_probs=121.9
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hc--------cCccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCcCCCc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MR--------EKNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDLKPSN 112 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~--------~~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~ 112 (234)
.++..|+..|.+.+...--.. +. .....+|..+ +.|+. ++|..+++|++++|+|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~---------~LH~~givH~dlkp~N 167 (304)
T cd05101 97 YVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGME---------YLASQKCIHRDLAARN 167 (304)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHH---------HHHHCCeeecccccce
Confidence 477788888888776543110 00 0122344322 44555 8898899999999999
Q ss_pred EEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChH
Q 026720 113 LLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSA 187 (234)
Q Consensus 113 ~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~ 187 (234)
+++ .....+++|+|.+..+..... ......++.|++||.+.+ ..++...|+||+|++++++++ |..||++....
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred EEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 999 456789999999886643211 111233456999998864 447889999999999999998 78899887666
Q ss_pred HHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 188 DQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 188 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+....+........+...+..+..+...|+...+.+|+++.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 247 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 555555443333344556678888889999999999999998864
No 200
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.54 E-value=9.9e-15 Score=115.30 Aligned_cols=174 Identities=19% Similarity=0.275 Sum_probs=115.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHh----------------hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCC
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL----------------MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPS 111 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~----------------m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~ 111 (234)
..++..|+..|++.+....-.. ++.+.+..+... +.|+. ++|+.+++|++++|+
T Consensus 71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~---------~lH~~~i~H~dikp~ 141 (270)
T cd05047 71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD---------YLSQKQFIHRDLAAR 141 (270)
T ss_pred ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHH---------HHHHCCEeecccccc
Confidence 3577778888888766432110 111122222222 44444 788889999999999
Q ss_pred cEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 026720 112 NLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQ 189 (234)
Q Consensus 112 ~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~ 189 (234)
|+++ .....++.+||.+..............+..|.+||.... ..++..+|+||+|++++|+++ |..||.+....+.
T Consensus 142 nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~ 220 (270)
T cd05047 142 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL 220 (270)
T ss_pred eEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH
Confidence 9999 466789999998764322111111122345899998863 447889999999999999996 9999987765555
Q ss_pred HHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 190 IYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 190 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+-.....+.+...+..+..+...|+...+.+||++++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 221 YEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred HHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 4444332222222334456777888899999999999998864
No 201
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.54 E-value=1.7e-14 Score=113.27 Aligned_cols=173 Identities=20% Similarity=0.310 Sum_probs=124.6
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-.. .+....+..|... +.|+. ++|..++.|++++|.|+++ .+...+++++
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~---------~lH~~~i~h~dl~~~nilv~~~~~~kl~d~ 148 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMA---------YLEEQNSIHRDLAARNILVGEDLVCKVADF 148 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccccCcceEEEcCCceEEEccc
Confidence 46777888888877653211 0111122233332 55666 8899999999999999999 4667899999
Q ss_pred cccccccCCCCC-CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 126 GMVKEIDSNLPC-TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 126 ~~a~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
+.+......... .....+..|.+||.... ..++...|+||+|++++++++ |+.||++....+....+......+.+.
T Consensus 149 g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 227 (261)
T cd05148 149 GLARLIKEDVYLSSDKKIPYKWTAPEAASH-GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPA 227 (261)
T ss_pred cchhhcCCccccccCCCCceEecCHHHHcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCC
Confidence 988776443211 12233456899998763 347889999999999999998 889998877666666655544455566
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..++.+..++..|+..++.+||++.+++.
T Consensus 228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 228 KCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 77788999999999999999999998764
No 202
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.54 E-value=7.1e-15 Score=119.66 Aligned_cols=138 Identities=30% Similarity=0.443 Sum_probs=102.9
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..+|..|+..|++.+...-.. .+++..+..|... +.|+. ++|+.+++|++++|.|+++ .+...++.||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~---------~lH~~~iiHrDlkp~Nili~~~~~~kL~Df 146 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAID---------SVHQLHYVHRDIKPDNILMDMNGHIRLADF 146 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeEecCCCHHHEEECCCCCEEEeec
Confidence 457888999999887765432 2333344444443 56666 8899999999999999999 4677899999
Q ss_pred cccccccCCC--CCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 026720 126 GMVKEIDSNL--PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 126 ~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~ 195 (234)
|.+..+.... ......+++.|++||++.. ...++..+|+||+|++++|+++|+.||.+....+...++..
T Consensus 147 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (332)
T cd05623 147 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (332)
T ss_pred chheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence 9887654321 1223467889999999752 23478899999999999999999999998877776666654
No 203
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.54 E-value=2.8e-14 Score=113.11 Aligned_cols=174 Identities=33% Similarity=0.546 Sum_probs=121.7
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.++..|+. +.+.+...-. ..++...+..+.. ++.++. ++|..++.|++++|+++++. ....++.++|
T Consensus 74 ~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~---------~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g 143 (282)
T cd07829 74 YLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLA---------YCHSHRILHRDLKPQNILINRDGVLKLADFG 143 (282)
T ss_pred EEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCChheEEEcCCCCEEEecCC
Confidence 34555665 3555443322 1222223333322 255555 88988999999999999994 5778999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
.+....... .......+..|.+||.......++...|+||+|++++|+++|.+||.+....+.+.++.+..+.++...|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (282)
T cd07829 144 LARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESW 223 (282)
T ss_pred cccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHH
Confidence 887764432 1222344567899999865445788999999999999999999999998888888777776665555433
Q ss_pred ----------------------------cchhhhhhhhccccCCCCCccccccCCC
Q 026720 206 ----------------------------PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 206 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+..+..+.+-++..++.+|+++++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 224 PGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred HhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 2345556677888899999999998764
No 204
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.54 E-value=1.5e-14 Score=115.05 Aligned_cols=176 Identities=20% Similarity=0.252 Sum_probs=124.1
Q ss_pred HHHHHHHhhcCChHHHHHHHH----hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeE
Q 026720 49 TALVEMYSKCGHVEKAFKVFN----LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKI 122 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~----~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~ 122 (234)
..++..|+..|.+.+...-.. .+++..+..+... +.|+. ++|..++.|++++|+++++. ....++
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ---------HLHVNKTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH---------HHHhCCccccCCCHHhEEECCCCCEEE
Confidence 368888999999887643211 1111122223322 45555 88888899999999999994 556889
Q ss_pred eeccccccccCCC-CCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh
Q 026720 123 GDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI 197 (234)
Q Consensus 123 ~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~ 197 (234)
.+||.+..+.... ......++..|++||++.. ...++...|+||+|++++|+++|+.||.+........++....
T Consensus 166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 245 (286)
T cd06638 166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP 245 (286)
T ss_pred ccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccC
Confidence 9999887654322 2233457788999998742 2346789999999999999999999998776555544432221
Q ss_pred --CCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 198 --GSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 198 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...++..++..+..++..++..++.+|+++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 246 PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 112344567778889999999999999999999875
No 205
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.54 E-value=2.6e-14 Score=118.97 Aligned_cols=149 Identities=21% Similarity=0.335 Sum_probs=106.3
Q ss_pred ccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccc
Q 026720 75 NLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGP 149 (234)
Q Consensus 75 ~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~p 149 (234)
.+..|... +.|+. ++|..+++|++++|+|+++ .....++.|||.+..+..... .....+++.|++|
T Consensus 186 ~~~~i~~ql~~aL~---------~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aP 256 (392)
T PHA03207 186 QAITIQRRLLEALA---------YLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSP 256 (392)
T ss_pred HHHHHHHHHHHHHH---------HHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCH
Confidence 44444443 56666 8899999999999999999 456789999999876544321 2245678899999
Q ss_pred cccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHhhCCCCC------------------------
Q 026720 150 EVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS---SADQIYKICQLIGSPTK------------------------ 202 (234)
Q Consensus 150 e~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~---~~~~~~~i~~~~~~~~~------------------------ 202 (234)
|++.+ ..|+..+|+||+|++++|+++|+.||.+.. ....+..+.+..+..+.
T Consensus 257 E~~~~-~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (392)
T PHA03207 257 ELLAL-DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPP 335 (392)
T ss_pred hHhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCC
Confidence 99864 447889999999999999999999997653 33444444443332111
Q ss_pred ---------CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 ---------DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..++..++.++..+....+.+|++..+++.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 336 YTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred ccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1123344556667778888899999998764
No 206
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.54 E-value=3.7e-14 Score=107.96 Aligned_cols=134 Identities=20% Similarity=0.295 Sum_probs=109.0
Q ss_pred hcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCccccccccccc--ccCCCCcchHHHHHHHHHHHHh
Q 026720 100 RQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFEMLS 176 (234)
Q Consensus 100 ~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e~~~ 176 (234)
+++++|++++|.|+++ ..+..+++|||.+..+..++......+-+.|++||.+.- .+.|....|+||+|+.++|+.+
T Consensus 210 KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT 289 (391)
T KOG0983|consen 210 KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT 289 (391)
T ss_pred hcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence 4579999999999999 578899999999999888776666667778999999843 4568999999999999999999
Q ss_pred CCCCCCCC-ChHHHHHHHHHhhCC--CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 177 FGILFPGK-SSADQIYKICQLIGS--PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 177 ~~~~f~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
|..||+++ .+.+.+.++.+.... |....++.-++++...|...+..+||...+++++
T Consensus 290 g~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 290 GQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 99999986 467777778774331 1123367778888888999999999988888764
No 207
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.54 E-value=1.7e-14 Score=114.32 Aligned_cols=182 Identities=19% Similarity=0.265 Sum_probs=123.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhcc----CccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEe
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMRE----KNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIG 123 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~----~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~ 123 (234)
..++..|+..|++.+..+-.....+ ....++..++....+.-... .++|..+++|++++|.|+++. ....++.
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM--AYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHH--HHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 4577888888988876543222111 11223333322222111111 178888999999999999994 5678999
Q ss_pred eccccccccCCCCC---CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCC
Q 026720 124 DLGMVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 124 ~~~~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
+||.+..+...... .....+..|++||.+.+ ..++...|+||+|++++|+++ +..||.+.........+.+....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~ 240 (277)
T cd05062 162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL 240 (277)
T ss_pred CCCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence 99988765432211 11233456999999864 347889999999999999998 68999887665555444443333
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.+...+..+..+...|+..++.+|+++.+++..
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 241 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 3345566778889999999999999999998753
No 208
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.54 E-value=1.6e-14 Score=113.06 Aligned_cols=171 Identities=18% Similarity=0.291 Sum_probs=121.8
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.++..|+..|.+.+....... ++.+.+..+.. ++.|+. ++|+.+++|++++|+++++. ....++.||
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~~~H~dl~p~nili~~~~~~kl~Df 144 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME---------YLESKKLVHRDLAARNILVSEDGVAKVSDF 144 (254)
T ss_pred EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccccCcceEEEcCCCcEEECCC
Confidence 467778888888776543211 12222233333 255666 88999999999999999994 567899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
|.+....... ........|.+||.+.. ..++...|+||+|++++++++ |..||++....+....+.+....+....
T Consensus 145 g~~~~~~~~~--~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T cd05083 145 GLARVGSMGV--DNSKLPVKWTAPEALKH-KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEG 221 (254)
T ss_pred ccceeccccC--CCCCCCceecCHHHhcc-CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCc
Confidence 9887654321 12233456899998763 347889999999999999997 8999988766555444433333333455
Q ss_pred CcchhhhhhhhccccCCCCCccccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+..+..+...|+...+.+|+++.+++.
T Consensus 222 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 222 CPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 6778888999999999999999998864
No 209
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.54 E-value=2.3e-14 Score=112.73 Aligned_cols=176 Identities=20% Similarity=0.297 Sum_probs=126.3
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
+..++..|+..|.+.+...-...++++.+..+... +.++. ++|..++.|++++|.++++ .....++.+|
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dl~p~nil~~~~~~~~l~df 146 (265)
T cd06631 76 TISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVA---------YLHNNCVVHRDIKGNNVMLMPNGIIKLIDF 146 (265)
T ss_pred eEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCcCHHhEEECCCCeEEeccc
Confidence 34577778888888877543333444444444333 55666 8888889999999999999 4677899999
Q ss_pred cccccccCCC-------CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC
Q 026720 126 GMVKEIDSNL-------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG 198 (234)
Q Consensus 126 ~~a~~~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~ 198 (234)
+.+....... ......++..|.+||...+ ..++...|+||+|++++++++|..||.+.........+.....
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (265)
T cd06631 147 GCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE-SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG 225 (265)
T ss_pred hhhHhhhhccccccccccccccCCCccccChhhhcC-CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC
Confidence 9877642210 1123456778999999864 3468899999999999999999999987765554444333211
Q ss_pred --CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 --SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+.+..++..+..+++.++..++.+|+++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 226 LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22334567788888999999999999999998864
No 210
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.54 E-value=2.3e-14 Score=112.12 Aligned_cols=174 Identities=22% Similarity=0.361 Sum_probs=123.1
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|++.+...-.. ..+...+..+.. ++.++. ++|+.++.|++++|.++++ .....++.++
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~ 145 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVS---------YIHKAGILHRDIKTLNIFLTKAGLIKLGDF 145 (256)
T ss_pred EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHH---------HHHhCCccccCCChHhEEEeCCCCEEECcC
Confidence 44566777788776543210 111223333333 356666 8898899999999999999 4567899999
Q ss_pred cccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.+....... ......++..|.+||...+. .++...|+||+|++++++++|..||++....+....+...-..+....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~-~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd08221 146 GISKILGSEYSMAETVVGTPYYMSPELCQGV-KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSV 224 (256)
T ss_pred cceEEcccccccccccCCCccccCHhhcCCC-CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccc
Confidence 9887654322 12334567889999988643 367889999999999999999999998776666666644333333344
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...|+..++.+|+++++++..
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 56677788888998889999999998764
No 211
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.54 E-value=1.7e-14 Score=113.24 Aligned_cols=174 Identities=17% Similarity=0.237 Sum_probs=119.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHh-hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..|.+.+..+-... ....++..|... +.|+. ++|..+++|++++|.++++ .....++++|
T Consensus 72 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dlk~~nili~~~~~~kl~df 142 (262)
T cd05058 72 PLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGME---------YLASKKFVHRDLAARNCMLDESFTVKVADF 142 (262)
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCccccccCcceEEEcCCCcEEECCc
Confidence 3467778888888776432111 111222333323 55555 8898899999999999999 4567899999
Q ss_pred cccccccCCC-----CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCC
Q 026720 126 GMVKEIDSNL-----PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 126 ~~a~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
|.+..+.... .......+..|.+||.... ..++...|+||+|++++|+++ +.+||++....+....+......
T Consensus 143 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (262)
T cd05058 143 GLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL 221 (262)
T ss_pred cccccccCCcceeecccccCcCCccccChhHhcc-CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC
Confidence 9887654311 1112233456899998763 347889999999999999999 46788877666655444433223
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+.+...+..+..+...|+...+.+||++.+++.
T Consensus 222 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 222 LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 333445667888889999999999999998864
No 212
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.53 E-value=1.8e-14 Score=114.08 Aligned_cols=175 Identities=19% Similarity=0.268 Sum_probs=122.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhc----cCccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-e
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMR----EKNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-S 116 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~----~~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~ 116 (234)
..++..|+..|.+.+...-..... ......+... +.|+. ++|..+++|++++|+++++ .
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA---------YLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCccccccChheEEEcC
Confidence 456667888888877654321111 0111223222 45555 7888899999999999999 4
Q ss_pred CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 026720 117 KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYK 192 (234)
Q Consensus 117 ~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~ 192 (234)
....++++||.+..+..... .....++..|.+||.... ..++...|+||+|++++|+++ |..||.+....+....
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 233 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKF 233 (277)
T ss_pred CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHH
Confidence 56788999998876543211 112233557999998763 347888999999999999998 8899987766555544
Q ss_pred HHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 193 ICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 193 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+......+.+..++..+..+...|+...+.+|+++.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 234 VIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 44332233455677888899999999999999999988653
No 213
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.53 E-value=1.3e-14 Score=115.05 Aligned_cols=181 Identities=17% Similarity=0.256 Sum_probs=120.0
Q ss_pred HHHHHHhhcCChHHHHHHHHhhcc-CccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeC----CeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMRE-KNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK----GVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~-~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~----~~~~~~~ 124 (234)
.++..|+..|.+.+...-...... ....++...+....+.....+ ++|..+++|++++|+++++.. ...++++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~--~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCK--YLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 467778888888776543321111 122333333332222221111 788888999999999999942 3578999
Q ss_pred ccccccccCCCCC---CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCC
Q 026720 125 LGMVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSP 200 (234)
Q Consensus 125 ~~~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~ 200 (234)
+|.+..+...... .....+..|++||...+ ..++..+|+||+|++++|+++ |..||++....+....+.......
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~ 241 (277)
T cd05036 163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLD 241 (277)
T ss_pred CccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence 9988876432111 11122346899999863 347899999999999999996 889999877666544443322222
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+...+..+..+...|+..++.+|+++.+++..
T Consensus 242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 234556677888888999999999999998754
No 214
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.53 E-value=7e-14 Score=104.01 Aligned_cols=139 Identities=22% Similarity=0.502 Sum_probs=117.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee--CCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS--KGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~--~~~~~~~~~ 125 (234)
-+||.+|..+-++.. ++..+...|+.-|... +.++. +.|+.+++|++++|.|+.+. .-..++.|+
T Consensus 110 paLiFE~v~n~Dfk~---ly~tl~d~dIryY~~elLkALd---------yCHS~GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQ---LYPTLTDYDIRYYIYELLKALD---------YCHSMGIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred chhHhhhhccccHHH---HhhhhchhhHHHHHHHHHHHHh---------HHHhcCcccccCCcceeeechhhceeeeeec
Confidence 468888888776654 4555677888888776 88888 88999999999999999994 456799999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHHhhCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFG-ILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~-~~f~~~~~~~~~~~i~~~~~~ 199 (234)
|+|+..|..+..+--+.++.+..||.+..-+.|.-..|+||+||.+.+|+..+ +.|.|.++.+++.+|.+..|.
T Consensus 178 GLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt 252 (338)
T KOG0668|consen 178 GLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGT 252 (338)
T ss_pred chHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhCh
Confidence 99999998887776778899999999998888888999999999999999877 556699999999999887764
No 215
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.53 E-value=1.6e-14 Score=114.77 Aligned_cols=174 Identities=21% Similarity=0.305 Sum_probs=119.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|++.+.......+++..+..+... +.|+. ++|..+++|++++|+|+++ .....++.||+
T Consensus 72 ~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~---------~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 72 LCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLE---------HMHNRFVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCcCCCCCCHHHEEECCCCCEEEccCC
Confidence 3577889999998765443333444444444443 56666 8899999999999999999 46678999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHhhCCCCCCC
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS--SADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~--~~~~~~~i~~~~~~~~~~~ 204 (234)
.+....... .....++..|++||.......++...|+||+|++++++++|..||.+.. ......+........-+..
T Consensus 143 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (279)
T cd05633 143 LACDFSKKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDS 221 (279)
T ss_pred cceeccccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccc
Confidence 887554322 2234577889999987544457889999999999999999999997543 2223222222222222334
Q ss_pred CcchhhhhhhhccccCCCCCc-----cccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGV-----NLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 232 (234)
++..+..++..++...+.+|+ ++.++++
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 566777777788888888887 4666654
No 216
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.53 E-value=3e-14 Score=113.83 Aligned_cols=176 Identities=19% Similarity=0.301 Sum_probs=120.9
Q ss_pred HHHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
-.++..|+..|.+.....-. ..+.+..+..+... +.++. ++|..+++|++++|.|+++. ....++.+|
T Consensus 84 ~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~---------~lH~~~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQ---------YLHSMKIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred EEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH---------HHhcCCeeecCCCcceEEEcCCCCEEEccC
Confidence 45677788888776543211 11223333333333 45555 78888999999999999994 567899999
Q ss_pred cccccccCCCC-CCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC-
Q 026720 126 GMVKEIDSNLP-CTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS- 199 (234)
Q Consensus 126 ~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~- 199 (234)
|.+........ .....++..|.+||.+.. ...++..+|+||+|+++|++++|+.||.+........++......
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 234 (292)
T cd06644 155 GVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT 234 (292)
T ss_pred ccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc
Confidence 98776433221 223456678999998742 233678899999999999999999999876655444444322111
Q ss_pred -CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 -PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.+..++..+..++..++...+.+|+++++++.+
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 235 LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1234566677788888999999999999998764
No 217
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.53 E-value=7.8e-15 Score=115.36 Aligned_cols=173 Identities=24% Similarity=0.358 Sum_probs=118.4
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..+.+.+..... ..++...+..+... +.++. ++|+ .+++|++++|+++++ ..+..++.++
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~ 145 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLT---------YLHEKHKIIHRDVKPSNILVNSRGQIKLCDF 145 (265)
T ss_pred EEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHH---------HHcCCCCeecCCCCHHHEEECCCCCEEEeec
Confidence 3555677777776654432 22222233333333 55666 7888 889999999999999 4567899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhhCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS-----SADQIYKICQLIGSP 200 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~-----~~~~~~~i~~~~~~~ 200 (234)
|.+.......... ..++..|.+||...+. .++...|+||+|++++++++|+.||.+.. ..+...++.+.....
T Consensus 146 g~~~~~~~~~~~~-~~~~~~y~~PE~~~~~-~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (265)
T cd06605 146 GVSGQLVNSLAKT-FVGTSSYMAPERIQGN-DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR 223 (265)
T ss_pred ccchhhHHHHhhc-ccCChhccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC
Confidence 9887664332212 4566779999998643 57889999999999999999999997652 222322222221111
Q ss_pred CCCC-CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TKDS-WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+.. ++..+..++..|+..++.+|+++.+++.+
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1122 67778888999999999999999998754
No 218
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.53 E-value=2.5e-14 Score=112.50 Aligned_cols=173 Identities=21% Similarity=0.314 Sum_probs=121.8
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-.. .++...+..+... +.++. ++|+.+++|++++|.|+++ .....++.+|
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~---------~lH~~~i~H~dl~p~Nill~~~~~~~L~df 146 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA---------YVERMNYVHRDLRAANILVGENLVCKVADF 146 (262)
T ss_pred EEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHH---------HHHHCCccccccCcccEEEcCCCcEEeccC
Confidence 47777888888877653210 0111122233322 44555 7888899999999999999 4567889999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+..+..... .....++..|++||.... ..++...|+||+|++++++++ |..||++....+....+......+..
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~ 225 (262)
T cd05071 147 GLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 225 (262)
T ss_pred CceeeccccccccccCCcccceecCHhHhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCc
Confidence 98876543221 112234456999998763 347889999999999999999 88899887766665555444444445
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..+...|+..++.+|+++.+++.
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 566778888999999999999999988753
No 219
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.53 E-value=4e-14 Score=113.78 Aligned_cols=172 Identities=16% Similarity=0.292 Sum_probs=118.0
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|.+.+....-. .++...+..|... +.|+. ++|..+++|++++|+|+++ .....++++||
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~---------~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg 154 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMM---------YLEERRLVHRDLAARNVLVKSPNHVKITDFG 154 (303)
T ss_pred eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHhhcCeeccccccceeeecCCCceEEcccc
Confidence 47778888888876543211 1222233333333 55555 8898899999999999999 45678999999
Q ss_pred ccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhh-CCCC
Q 026720 127 MVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLI-GSPT 201 (234)
Q Consensus 127 ~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~-~~~~ 201 (234)
.+..+..... ......+..|++||...+ ..++...|+||+|++++|+++ |+.||.+....+. .++.... ..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~ 232 (303)
T cd05110 155 LARLLEGDEKEYNADGGKMPIKWMALECIHY-RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLEKGERLPQ 232 (303)
T ss_pred ccccccCcccccccCCCccccccCCHHHhcc-CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHCCCCCCC
Confidence 8886543221 112233457899998863 447889999999999999997 8899987654443 3333322 2333
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+..++..+..+...||..++.+|+++.+++.
T Consensus 233 ~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 233 PPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 3445566777888899999999999998764
No 220
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=9.5e-15 Score=111.26 Aligned_cols=121 Identities=35% Similarity=0.641 Sum_probs=100.2
Q ss_pred cccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeC-CeeeEeeccccccccCCC--CCCCcccCcccccccc
Q 026720 76 LQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPEV 151 (234)
Q Consensus 76 ~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~-~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe~ 151 (234)
+..|..+ ++|+- ++|+.++.|++++|.|.+.++ ...+++|||+++.....- .....+.+-.|++||+
T Consensus 158 vKVFlYQILRGLK---------YLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEi 228 (449)
T KOG0664|consen 158 VKVFVYQILRGLK---------YLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPEL 228 (449)
T ss_pred hhhhHHHHHhhhH---------HHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHH
Confidence 3345555 88888 999999999999999999964 457999999998653321 1122356678999999
Q ss_pred cccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 152 LLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 152 ~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
+.+.++|+..+|+||.||++.|++.++.+|...+...++.-|.+-.|.|..+..
T Consensus 229 LMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaM 282 (449)
T KOG0664|consen 229 LMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAM 282 (449)
T ss_pred hhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHH
Confidence 999999999999999999999999999999999999999999998888876543
No 221
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.53 E-value=2e-14 Score=113.31 Aligned_cols=173 Identities=23% Similarity=0.329 Sum_probs=116.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...-...++.+.+..+... +.|+. ++|..+++|++++|.++++ .....++.++|.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~---------~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~ 152 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMS---------YLHSNMIVHRDIKGANILRDSAGNVKLGDFGA 152 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeeCCCCHHHEEECCCCCEEEccCCC
Confidence 456677777777765543222332333333332 55555 7888899999999999999 456789999998
Q ss_pred cccccCCC----CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC-C
Q 026720 128 VKEIDSNL----PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT-K 202 (234)
Q Consensus 128 a~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~-~ 202 (234)
+..+.... ......++..|.+||...+ ..++...|+||+|++++|+++|+.||.+........++......|. +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (266)
T cd06651 153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLP 231 (266)
T ss_pred ccccccccccCCccccCCccccccCHHHhCC-CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCc
Confidence 87653211 1122345677999999864 4478899999999999999999999987765554444332222222 1
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...++.+..+. .|+...+.+|+++++++++
T Consensus 232 ~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 232 SHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred hhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 23345566666 3666799999999999874
No 222
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.53 E-value=1.9e-14 Score=117.38 Aligned_cols=135 Identities=20% Similarity=0.319 Sum_probs=100.8
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.|+++. ....+++|||.+..+.... ......++..|++||.+.+ ..++.+.|+||+|++++
T Consensus 188 ~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l~ 266 (337)
T cd05054 188 FLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLW 266 (337)
T ss_pred HHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC-CCCCccccHHHHHHHHH
Confidence 88999999999999999994 5678999999988764321 1122334456999998864 44788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHh-hCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQL-IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||++....+...+.... .....+..++..+..+...|+...+.+||+++++++
T Consensus 267 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~ 328 (337)
T cd05054 267 EIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVE 328 (337)
T ss_pred HHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9997 99999876555544444332 222233455566777777799999999999999875
No 223
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.53 E-value=2.7e-14 Score=113.49 Aligned_cols=137 Identities=35% Similarity=0.619 Sum_probs=106.7
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
++|..++.|++++|.++++ ..+..++++++.+....... .......+..|++||.+.+...++...|+||+|+++++
T Consensus 115 ~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~e 194 (287)
T cd07840 115 YLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAE 194 (287)
T ss_pred HHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHH
Confidence 7888899999999999999 46778999999888765432 12223456679999987655557889999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc------------------------------chhhhhhhhccccCCCC
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIGSPTKDSWP------------------------------LGIQLASNLNWKLPQMG 223 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~ 223 (234)
+++|+.||.+....+...++.+..+.++...|+ ..+..+.+.++...+.+
T Consensus 195 l~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 274 (287)
T cd07840 195 LFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKK 274 (287)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhh
Confidence 999999999888877777777776666555443 33344566778889999
Q ss_pred CccccccCCC
Q 026720 224 GVNLLAVMPS 233 (234)
Q Consensus 224 ~~~~~~~~~~ 233 (234)
|++.++++..
T Consensus 275 Rp~~~~~l~~ 284 (287)
T cd07840 275 RISADQALQH 284 (287)
T ss_pred CcCHHHHhhC
Confidence 9999988753
No 224
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.53 E-value=3.4e-14 Score=113.17 Aligned_cols=173 Identities=20% Similarity=0.342 Sum_probs=119.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...- ..++...+..+... +.++. ++|+.++.|++++|.|+++ .....++.+++.
T Consensus 92 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~---------~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~ 161 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALS---------FLHAQGVIHRDIKSDSILLTSDGRVKLSDFGF 161 (285)
T ss_pred EEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCChhhEEEcCCCcEEEccccc
Confidence 455667777777665432 12222223333333 55555 7888899999999999999 456789999987
Q ss_pred cccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC--CCC
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT--KDS 204 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~--~~~ 204 (234)
+........ .....++..|++||...+. .++...|+||+|++++++++|..||.+........++........ ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (285)
T cd06648 162 CAQVSKEVPRRKSLVGTPYWMAPEVISRL-PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHK 240 (285)
T ss_pred chhhccCCcccccccCCccccCHHHhcCC-CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCccccc
Confidence 765543322 1234567789999998643 478899999999999999999999987665555544433311111 122
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+.+.++..++.+|+++++++.+
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 45678888888999999999999998863
No 225
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.53 E-value=2.7e-14 Score=115.35 Aligned_cols=173 Identities=17% Similarity=0.307 Sum_probs=119.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhh---------c-cCccccHHH-------HHHHHHhcCCchhhhHhhhcccccCCcCCCc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLM---------R-EKNLQSWTI-------MISGLADNSRGNDAISLHRQGYFHRDLKPSN 112 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m---------~-~~~~~~~~~-------~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~ 112 (234)
.++..|+..|.+.+...-.... . .....++.. ++.|+. ++|+.+++|++++|.|
T Consensus 94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~---------~lH~~gi~H~dlkp~N 164 (314)
T cd05099 94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGME---------YLESRRCIHRDLAARN 164 (314)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHH---------HHHHCCeeecccccee
Confidence 4667788888887765432110 0 011233332 245555 8899999999999999
Q ss_pred EEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChH
Q 026720 113 LLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSA 187 (234)
Q Consensus 113 ~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~ 187 (234)
+++. ....++.+||.++....... ......+..|++||.+.+ ..++...|+||+|++++++++ |..||++....
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~ 243 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE 243 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9994 66789999999886643211 111122346899998863 457889999999999999998 88999877655
Q ss_pred HHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 188 DQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 188 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+....+........+...+..+..+...|+..++.+|+++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 244 ELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 555444433222233445567778888999999999999988764
No 226
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.53 E-value=4.8e-14 Score=112.09 Aligned_cols=136 Identities=37% Similarity=0.606 Sum_probs=105.9
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..++.|++++|+++++ .....++++|+.+.............++..|.+||...+. .++...|+||+|+++++++
T Consensus 122 ~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Di~s~G~~l~~l~ 200 (287)
T cd07838 122 FLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQS-SYATPVDMWSVGCIFAELF 200 (287)
T ss_pred HHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccC-CCCCcchhhhHHHHHHHHH
Confidence 7888889999999999999 4677899999988776543333344566779999998643 4788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCCCCc--------------------------chhhhhhhhccccCCCCCccccc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKDSWP--------------------------LGIQLASNLNWKLPQMGGVNLLA 229 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~ 229 (234)
+|.++|.+....+...++.+....+....|+ ..+..+...|+..++.+|+++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~ 280 (287)
T cd07838 201 RRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFE 280 (287)
T ss_pred hCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHH
Confidence 9999999988888888887765443322222 23345667788999999999999
Q ss_pred cCCC
Q 026720 230 VMPS 233 (234)
Q Consensus 230 ~~~~ 233 (234)
++..
T Consensus 281 il~~ 284 (287)
T cd07838 281 ALQH 284 (287)
T ss_pred HhcC
Confidence 8764
No 227
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.53 E-value=3.3e-14 Score=112.85 Aligned_cols=176 Identities=17% Similarity=0.267 Sum_probs=127.0
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..|.+.+..+-.+ .+++..+..+... +.++. ++|..+++|++++|+++++ .....++.++
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~---------~lh~~~i~h~dl~p~nili~~~~~~~l~d~ 147 (280)
T cd06611 77 LWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALN---------FLHSHKVIHRDLKAGNILLTLDGDVKLADF 147 (280)
T ss_pred EEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCChhhEEECCCCCEEEccC
Confidence 457778899999988755432 2344444444444 56666 8899999999999999999 4667899999
Q ss_pred cccccccCCC-CCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC--
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG-- 198 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~-- 198 (234)
|.+....... ......++..|.+||.+.. ...++...|+||+|+++|++++|+.||.+........++.....
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (280)
T cd06611 148 GVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPT 227 (280)
T ss_pred ccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCC
Confidence 8776554322 1223456778999998742 22356789999999999999999999988766655555433211
Q ss_pred CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..|+..+..+...++...+.+|+++++++.+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 228 LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 11234677788888899999999999999998864
No 228
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=6.7e-14 Score=105.47 Aligned_cols=112 Identities=38% Similarity=0.731 Sum_probs=96.6
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCC-----CCCcccCcccccccccccccCCCCcchHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLP-----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAI 170 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~ 170 (234)
++|...++|++++|.|+++. ++..++.|||+++.+..+-. ...-+.+-+|.+||.+.+-+.|...+|+|+.||+
T Consensus 139 ~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCi 218 (376)
T KOG0669|consen 139 YIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCI 218 (376)
T ss_pred HHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHH
Confidence 78887899999999999994 68999999999987644321 1122446789999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcch
Q 026720 171 MFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLG 208 (234)
Q Consensus 171 l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~ 208 (234)
+.||+++.+.|.|.....++.-|..--|...++.|++.
T Consensus 219 maeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~ 256 (376)
T KOG0669|consen 219 MAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNV 256 (376)
T ss_pred HHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCc
Confidence 99999999999999999999999999999999999853
No 229
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.52 E-value=2.7e-14 Score=114.04 Aligned_cols=176 Identities=19% Similarity=0.266 Sum_probs=122.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHh----hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeE
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKI 122 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~ 122 (234)
..++..|...|.+.+..+.... +++..+..+.. ++.++. ++|..+++|++++|+++++ .....++
T Consensus 99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ---------HLHNNRIIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCHHHEEEcCCCCEEE
Confidence 3577888888888886553211 11111122222 244444 7888899999999999999 4556799
Q ss_pred eeccccccccCCC-CCCCcccCccccccccccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh
Q 026720 123 GDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSE----IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI 197 (234)
Q Consensus 123 ~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~----~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~ 197 (234)
.++|.+..+.... ......++..|.+||.+.... .++..+|+||+|++++++++|+.||.+......+.++.+..
T Consensus 170 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~ 249 (291)
T cd06639 170 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNP 249 (291)
T ss_pred eecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCC
Confidence 9999887654321 122345667799999875332 25789999999999999999999998876655555544332
Q ss_pred CC--CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 198 GS--PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 198 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.. .++..++..+..++..|+...+.+|+++.+++.+
T Consensus 250 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 250 PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 21 2234566678888888999999999999998864
No 230
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.52 E-value=1.9e-14 Score=112.98 Aligned_cols=173 Identities=21% Similarity=0.358 Sum_probs=122.5
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+....-. .++...+..+.. ++.++. ++|..+++|++++|.++.+ .....++.++
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~---------~LH~~~i~H~dl~p~ni~i~~~~~~~l~df 146 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMA---------FIERKNYIHRDLRAANILVSETLCCKIADF 146 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH---------HHhcCCeecccccHHhEEEcCCCCEEEccC
Confidence 56677778888776543211 111112222222 245555 7888899999999999999 4567899999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+........ ......+..|.+||.... ..++...|+||+|++++++++ |+.||++....+....+.+....+..
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T cd05067 147 GLARLIEDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRP 225 (260)
T ss_pred cceeecCCCCcccccCCcccccccCHHHhcc-CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCC
Confidence 98876652211 112233456899998864 336788999999999999998 99999988776666665554444555
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..+...|+...+.+|+++++++.
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 226 DNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 666778888999999999999999988764
No 231
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.52 E-value=2.1e-14 Score=114.83 Aligned_cols=173 Identities=21% Similarity=0.356 Sum_probs=121.2
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...- ..+....+..+... +.|+. ++|+.+++|++++|.|+++ .....++.+||.
T Consensus 95 ~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~---------~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~ 164 (292)
T cd06658 95 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALS---------YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGF 164 (292)
T ss_pred EEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHH---------HHHHCCEeecCCCHHHEEEcCCCCEEEccCcc
Confidence 456667777777664321 11222223333333 55666 8898899999999999999 456789999998
Q ss_pred cccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC--CCCCC
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS--PTKDS 204 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~--~~~~~ 204 (234)
+........ .....++..|++||.... ..++...|+||+|++++|+++|..||.+.........+...... ++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (292)
T cd06658 165 CAQVSKEVPKRKSLVGTPYWMAPEVISR-LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHK 243 (292)
T ss_pred hhhcccccccCceeecCccccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccc
Confidence 876533221 223456778999999863 34788999999999999999999999887666555444333222 22234
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...++..++.+|+++++++.+
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 55677888888899999999999998864
No 232
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.52 E-value=3.1e-14 Score=111.38 Aligned_cols=175 Identities=21% Similarity=0.309 Sum_probs=121.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+..+-...+....+..+.. ++.|+. ++|..++.|++++|+++.+ .....++.+++.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~ 148 (258)
T cd06632 78 YIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLE---------YLHDRNTVHRDIKGANILVDTNGVVKLADFGM 148 (258)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEECCCCCEEEccCcc
Confidence 35566777777765543322222222222322 356666 8898999999999999999 467789999998
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC-CCCCc
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT-KDSWP 206 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~-~~~~~ 206 (234)
+.............++..|.+||.......++...|+||+|++++++++|+.||......+...++-.....+. +...+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (258)
T cd06632 149 AKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLS 228 (258)
T ss_pred ceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcC
Confidence 87665433234455677899999875333367889999999999999999999987765555555433222222 23456
Q ss_pred chhhhhhhhccccCCCCCccccccCCC
Q 026720 207 LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..+...++...+..|+++++++..
T Consensus 229 ~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 229 DEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 677788888998899999999998864
No 233
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.52 E-value=1.9e-14 Score=116.98 Aligned_cols=137 Identities=34% Similarity=0.580 Sum_probs=108.1
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC----CCCCcccCcccccccccccccCCCCcchHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL----PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIM 171 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l 171 (234)
++|..++.|++++|.++++ .....+++++|.+....... ......++..|.+||.+.+...++...|+||+|+++
T Consensus 118 ~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il 197 (330)
T cd07834 118 YLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF 197 (330)
T ss_pred HHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence 8898899999999999999 45678999999888765432 123345677899999987554678899999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC------------------------------cchhhhhhhhccccCC
Q 026720 172 FEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW------------------------------PLGIQLASNLNWKLPQ 221 (234)
Q Consensus 172 ~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~ 221 (234)
+++++|.+||++....+....+....+.+....+ +..+..+...++..++
T Consensus 198 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 277 (330)
T cd07834 198 AELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDP 277 (330)
T ss_pred HHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCCh
Confidence 9999999999999888877777776665554322 2344567777888899
Q ss_pred CCCccccccCCC
Q 026720 222 MGGVNLLAVMPS 233 (234)
Q Consensus 222 ~~~~~~~~~~~~ 233 (234)
.+|+++++++.+
T Consensus 278 ~~Rpt~~~ll~~ 289 (330)
T cd07834 278 KKRITADEALAH 289 (330)
T ss_pred hhCCCHHHHHhC
Confidence 999999988753
No 234
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.52 E-value=2.3e-14 Score=114.95 Aligned_cols=150 Identities=33% Similarity=0.567 Sum_probs=111.5
Q ss_pred ccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC--CCCCcccCccccccc
Q 026720 75 NLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPE 150 (234)
Q Consensus 75 ~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe 150 (234)
.+..+... +.|+. ++|..+++|++++|.++++ .....++.++|.+....... .......+..|.+||
T Consensus 117 ~~~~i~~qi~~aL~---------~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE 187 (302)
T cd07864 117 HIKSFMKQLLEGLN---------YCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPE 187 (302)
T ss_pred HHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChH
Confidence 33444444 55666 8898899999999999999 45678999999887654322 112223456789999
Q ss_pred ccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC-------------------------
Q 026720 151 VLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW------------------------- 205 (234)
Q Consensus 151 ~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~------------------------- 205 (234)
.......++...|+||+|++++++++|++||......+.+..+.+..+.+.+..|
T Consensus 188 ~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (302)
T cd07864 188 LLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE 267 (302)
T ss_pred HhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhh
Confidence 8765455678899999999999999999999988777777777665555443332
Q ss_pred ----cchhhhhhhhccccCCCCCccccccCCC
Q 026720 206 ----PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 206 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+..+..+...++..++.+|++++++++.
T Consensus 268 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 268 FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 3455667777889999999999998864
No 235
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.52 E-value=1.7e-14 Score=117.49 Aligned_cols=173 Identities=30% Similarity=0.498 Sum_probs=119.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+. |.+.+...-...++...+..+... +.|+. ++|..+++|++++|+++++ ..+..++++||.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~---------~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLK---------YIHSANVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHEEEcCCCcEEeccccc
Confidence 46666775 444443322222333333333333 56666 8898899999999999999 467789999998
Q ss_pred cccccCCCC-----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 128 VKEIDSNLP-----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 128 a~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+........ .....++..|.+||.+.....++...|+||+|++++++++|+.||++......+..+....+.|..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~ 233 (334)
T cd07855 154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE 233 (334)
T ss_pred ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence 876543211 123456778999999765455788999999999999999999999988766655544444343321
Q ss_pred -----------------------C-------CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 -----------------------D-------SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 -----------------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
. ..++.+..+.+.++...+.+|+++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1 12445666778888899999999998775
No 236
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.52 E-value=2.3e-14 Score=113.08 Aligned_cols=174 Identities=18% Similarity=0.238 Sum_probs=119.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhcc-----CccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeee
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMRE-----KNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIK 121 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~-----~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~ 121 (234)
..++..|+..|++.+...-...... .....|.. ++.|+. ++|+.+++|++++|.|+++ .+...+
T Consensus 70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~---------~lH~~~ivH~dlkp~Nill~~~~~~k 140 (269)
T cd05042 70 YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLL---------WLHQADFIHSDLALRNCQLTADLSVK 140 (269)
T ss_pred eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHH---------HHHhcCEecccccHhheEecCCCcEE
Confidence 4678888888998876544322211 11223333 356666 8899999999999999999 456789
Q ss_pred EeeccccccccCCC---CCCCcccCccccccccccc------ccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 026720 122 IGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLF------SEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIY 191 (234)
Q Consensus 122 ~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~------~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~ 191 (234)
+.+||.+....... .......+..|.+||+... ...++...|+||+|++++|+++ +..||++....+.+.
T Consensus 141 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~ 220 (269)
T cd05042 141 IGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLK 220 (269)
T ss_pred EeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence 99999876543211 1112233456899998642 2235778999999999999998 778998887777666
Q ss_pred HHHHhhCC--CC---CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 192 KICQLIGS--PT---KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 192 ~i~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+...... +. ...++..+..++++||. ++.+||+++++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dp~~Rpt~~~v~~ 265 (269)
T cd05042 221 QVVREQDIKLPKPQLDLKYSDRWYEVMQFCWL-DPETRPTAEEVHE 265 (269)
T ss_pred HHhhccCccCCCCcccccCCHHHHHHHHHHhc-CcccccCHHHHHH
Confidence 65543321 11 23566677778888885 8889999998865
No 237
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.52 E-value=4.6e-14 Score=113.43 Aligned_cols=174 Identities=20% Similarity=0.267 Sum_probs=118.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHh--hcc-----------CccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL--MRE-----------KNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDL 108 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~--m~~-----------~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l 108 (234)
..++..|+..|.+.+-...... ... ....+|... +.|+. ++|+.+++|+++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~---------~lH~~~ivH~dl 164 (304)
T cd05096 94 LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMK---------YLSSLNFVHRDL 164 (304)
T ss_pred eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHH---------HHHHCCccccCc
Confidence 4678889999998776433211 100 012233322 44455 788889999999
Q ss_pred CCCcEEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh--CCCCCC
Q 026720 109 KPSNLLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS--FGILFP 182 (234)
Q Consensus 109 ~p~~~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~--~~~~f~ 182 (234)
+|+|+++. ....+++|||.+..+..... .....++..|++||++.. ..++...|+||+|++++|+++ +..||.
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred chhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 99999994 56789999999886543211 112233567999998864 347899999999999999986 557777
Q ss_pred CCChHHHHHHHHHhhC-------CCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 183 GKSSADQIYKICQLIG-------SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 183 ~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+....+....+.+... ...+...+..+..++..||..++.+||++++|.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 244 ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 7655554443322111 1122345678889999999999999999998753
No 238
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.52 E-value=2.5e-14 Score=112.30 Aligned_cols=174 Identities=25% Similarity=0.327 Sum_probs=124.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..+.+.+...-...++...+..+... +.++. ++|. .++.|++++|+++.+ .....++.+|+
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~---------~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~ 145 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLD---------YLHTKRHIIHRDIKPSNLLINSKGEVKIADFG 145 (264)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHhccCCCccCCCCHHHEEECCCCCEEEccCc
Confidence 456678888888777554333333333344333 66666 8898 889999999999999 46678999999
Q ss_pred ccccccCCCCC-CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--hHHH-HHHHHHhhCCCCC
Q 026720 127 MVKEIDSNLPC-TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS--SADQ-IYKICQLIGSPTK 202 (234)
Q Consensus 127 ~a~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~--~~~~-~~~i~~~~~~~~~ 202 (234)
.+..+...... ....++..|.+||.... ..++...|+||+|++++++++|..||.+.. .... ...+......+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (264)
T cd06623 146 ISKVLENTLDQCNTFVGTVTYMSPERIQG-ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLP 224 (264)
T ss_pred cceecccCCCcccceeecccccCHhhhCC-CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCC
Confidence 88876543322 23456678999998763 457889999999999999999999998774 3333 3333322222233
Q ss_pred CC-CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DS-WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.. +++.+..+...++...+.+|++++++++.
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 34 67788999999999999999999998763
No 239
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.52 E-value=2.3e-14 Score=112.82 Aligned_cols=173 Identities=21% Similarity=0.381 Sum_probs=119.8
Q ss_pred HHHHHHhhcCChHHHHHHHHh----hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.++..|+..|.+......... +++..+..+... +.|+. ++|..++.|++++|+++++ .+...++.
T Consensus 78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~LH~~~i~H~dl~~~nil~~~~~~~~l~ 148 (267)
T cd08228 78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE---------HMHSRRVMHRDIKPANVFITATGVVKLG 148 (267)
T ss_pred EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHH---------HHhhCCeeCCCCCHHHEEEcCCCCEEEC
Confidence 456677888888766543221 222223333333 55666 8899999999999999999 45668899
Q ss_pred eccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhhCCCC
Q 026720 124 DLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS-SADQIYKICQLIGSPT 201 (234)
Q Consensus 124 ~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~-~~~~~~~i~~~~~~~~ 201 (234)
+++.+........ .....++..|++||...+ ..++...|+||+|+++|++++|+.||.+.. +.............+.
T Consensus 149 d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08228 149 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPP 227 (267)
T ss_pred ccccceeccchhHHHhcCCCCccccChhhhcc-CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCC
Confidence 9998776543211 123456677999998864 346788999999999999999999987543 2233333333333332
Q ss_pred C--CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 K--DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
. ...+..+..++..||...+.+||++++++.
T Consensus 228 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 228 LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 2 345677888999999999999999998864
No 240
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.52 E-value=4.2e-14 Score=114.83 Aligned_cols=174 Identities=25% Similarity=0.269 Sum_probs=123.4
Q ss_pred HHHHHHHHHhhcCChHHHHHHHHhh--ccCcc-ccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeE
Q 026720 47 IGTALVEMYSKCGHVEKAFKVFNLM--REKNL-QSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKI 122 (234)
Q Consensus 47 ~~~~li~~~~~~g~~~~a~~~~~~m--~~~~~-~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~ 122 (234)
..-+||..||..|.+...-. +.+ .+... .-+--++.|+- +||.++++|+|++|.|.++ ..+.+++
T Consensus 183 ~~~YlVley~s~G~v~w~p~--d~~els~~~Ar~ylrDvv~GLE---------YLH~QgiiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 183 DKLYLVLEYCSKGEVKWCPP--DKPELSEQQARKYLRDVVLGLE---------YLHYQGIIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred CceEEEEEeccCCccccCCC--CcccccHHHHHHHHHHHHHHHH---------HHHhcCeeccccchhheEEcCCCcEEe
Confidence 34578888998887765310 000 00000 01122466776 9999999999999999999 5789999
Q ss_pred eeccccccccCCC------CCCCcccCccccccccccccc---CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 026720 123 GDLGMVKEIDSNL------PCTDYVTTRWYRGPEVLLFSE---IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKI 193 (234)
Q Consensus 123 ~~~~~a~~~~~~~------~~~~~~~~~~~~~pe~~~~~~---~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i 193 (234)
+|||.+....... .....+|+|.++|||...... ..+.++|+||+|+.+|-++.|+.||-+..-.+..-+|
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 9999988662211 122368999999999986522 2368899999999999999999999988877777777
Q ss_pred HHhhC-CCCCCCCcchhhhhhhhccccCCCCCccccccC
Q 026720 194 CQLIG-SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 194 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
...-- .|....-++..+.++.....-++.+|+++.+|-
T Consensus 332 vn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 332 VNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred hcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhe
Confidence 65433 344444456777777666677788899988764
No 241
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.52 E-value=6.7e-14 Score=112.65 Aligned_cols=171 Identities=22% Similarity=0.356 Sum_probs=120.5
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.+|..|+. |.+.+..... ..+..+.+..+... +.|+. ++|..+++|++++|.++++ .....++.+|+
T Consensus 91 ~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~---------~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 91 WLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLA---------YLHSHERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred EEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHH---------HHHHCCceecCCCcccEEECCCCCEEEeecC
Confidence 46777776 5544433211 11222333333333 55566 8898889999999999999 45678999999
Q ss_pred ccccccCCCCCCCcccCccccccccccc--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh-hCCCCCC
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL-IGSPTKD 203 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~-~~~~~~~ 203 (234)
.+..... .....+++.|++||.+.. ...++...|+||+|+++||+++|.+||.+.........+... .......
T Consensus 161 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (307)
T cd06607 161 SASLVSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSN 237 (307)
T ss_pred cceecCC---CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCch
Confidence 8765432 233456778999998742 234778999999999999999999999887766665554322 1122234
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.|++.+..+...|+..++.+|+++++++..
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred hhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 588888999999999999999999998763
No 242
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.51 E-value=1.1e-13 Score=109.97 Aligned_cols=137 Identities=34% Similarity=0.622 Sum_probs=106.1
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|..+++|++++|.++++ .+...++.+|+.+..+..... .....++..|.+||...+...++...|+||+|++++++
T Consensus 115 ~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l 194 (284)
T cd07860 115 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 194 (284)
T ss_pred HHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHH
Confidence 7888899999999999999 466789999998876543211 12234567799999887555567889999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc----------------------------chhhhhhhhccccCCCCCcc
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKDSWP----------------------------LGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~ 226 (234)
++|+.||++....+...++.+..+.+....|+ ..+..+...++..++.+|++
T Consensus 195 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 274 (284)
T cd07860 195 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS 274 (284)
T ss_pred HHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC
Confidence 99999999998888888888777766543332 23334666778889999999
Q ss_pred ccccCCC
Q 026720 227 LLAVMPS 233 (234)
Q Consensus 227 ~~~~~~~ 233 (234)
+++++.+
T Consensus 275 ~~~~l~~ 281 (284)
T cd07860 275 AKAALAH 281 (284)
T ss_pred HHHHhcC
Confidence 9998764
No 243
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.51 E-value=2.3e-14 Score=116.90 Aligned_cols=137 Identities=33% Similarity=0.532 Sum_probs=101.2
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|..+++|++++|.|+++ .....++.+||.+....... ......++..|.+||.+.....++...|+||+|++++++
T Consensus 123 ~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l 202 (337)
T cd07858 123 YIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAEL 202 (337)
T ss_pred HHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHH
Confidence 8898899999999999999 45678999999887664321 122345677899999876444578899999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCC------------------------------CCcchhhhhhhhccccCCCCC
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKD------------------------------SWPLGIQLASNLNWKLPQMGG 224 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~ 224 (234)
++|++||++.........+.+..+.+... ..+..+..+.+.|+..++.+|
T Consensus 203 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 282 (337)
T cd07858 203 LGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKR 282 (337)
T ss_pred HcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhc
Confidence 99999998876544444444333322111 223445567778889999999
Q ss_pred ccccccCCC
Q 026720 225 VNLLAVMPS 233 (234)
Q Consensus 225 ~~~~~~~~~ 233 (234)
+++++++.+
T Consensus 283 ps~~ell~h 291 (337)
T cd07858 283 ITVEEALAH 291 (337)
T ss_pred cCHHHHHcC
Confidence 999998864
No 244
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.51 E-value=1.1e-14 Score=116.32 Aligned_cols=174 Identities=18% Similarity=0.285 Sum_probs=118.4
Q ss_pred HHHHHHhhcCChHHHHHHHHhh----------ccCccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCcCCCc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLM----------REKNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDLKPSN 112 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m----------~~~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~ 112 (234)
.++..|+..|.+....+-.... ......++..+ +.|+. ++|..+++|++++|+|
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~---------~LH~~~ivH~dlkp~N 162 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGME---------FLASKKCIHRDLAARN 162 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHH---------HHHHCCccccccceee
Confidence 5677788888887765432110 00112233222 45555 7888899999999999
Q ss_pred EEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChH
Q 026720 113 LLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSA 187 (234)
Q Consensus 113 ~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~ 187 (234)
+++ .....+++|||.+..+..... ......+..|.+||... ...++..+|+||+|++++|+++ |..||++....
T Consensus 163 il~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALF-DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred EEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhc-cCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 999 467789999999887654221 11112335689999875 3457889999999999999997 88999877655
Q ss_pred HHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 188 DQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 188 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+....+......+.+...+..+..+...|+...+.+|+++.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 242 ELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 5444443332223333445667777888998889999999998753
No 245
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.51 E-value=3.1e-14 Score=114.37 Aligned_cols=174 Identities=20% Similarity=0.344 Sum_probs=122.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHh--hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~ 124 (234)
..++..|+..|++.+..+--.. ++.+.+..+... +.|+. ++|..+++|++++|.++++. ....++++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~---------~lH~~~ivH~dlkp~Nil~~~~~~~~l~d 184 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMA---------FLASKNCIHRDLAARNVLLTHGKIVKICD 184 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeehhhhccceEEEcCCCeEEECC
Confidence 3577778888888776432111 233334444433 55666 88988999999999999994 56778999
Q ss_pred ccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhh-CC
Q 026720 125 LGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLI-GS 199 (234)
Q Consensus 125 ~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~-~~ 199 (234)
||.+..+..... ......+..|++||.+... .++...|+||+|++++++++ |..||++....+...+..... ..
T Consensus 185 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 263 (302)
T cd05055 185 FGLARDIMNDSNYVVKGNARLPVKWMAPESIFNC-VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM 263 (302)
T ss_pred CcccccccCCCceeecCCCCcccccCCHhhhccC-CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC
Confidence 998876543211 1112334569999988643 36889999999999999998 899999877666655554432 22
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+.+...+..+..+...|+..++.+|+++.+++.
T Consensus 264 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 264 AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 223345678888999999999999999998864
No 246
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.51 E-value=3.3e-14 Score=112.78 Aligned_cols=174 Identities=17% Similarity=0.286 Sum_probs=121.3
Q ss_pred HHHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++.+|+..|.+.+...-- ..+++..+..|... +.|+. ++|+.+++|++++|+++++ .....++.+|
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~---------~LH~~~i~H~di~p~nil~~~~~~~kL~df 153 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMS---------YLEEKRLVHRDLAARNVLVKTPQHVKITDF 153 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HHHhCCEEecccCcceEEEcCCCeEEECCC
Confidence 45677788888887654321 11222233333333 45555 8888999999999999999 4567899999
Q ss_pred cccccccCCCCC---CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 126 GMVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 126 ~~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
+.+..+...... .....+..|++||.... ..++...|+||+|++++|+++ |+.||.+....+....+......+.
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (279)
T cd05057 154 GLAKLLDVDEKEYHAEGGKVPIKWMALESILH-RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQ 232 (279)
T ss_pred cccccccCcccceecCCCcccccccCHHHhhc-CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCC
Confidence 988765432111 11122346899998753 346889999999999999998 9999998766665555544333444
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+...+..+..+...||..++..||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 233 PPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 4555667777888899999999999998754
No 247
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.51 E-value=2.9e-14 Score=111.88 Aligned_cols=173 Identities=20% Similarity=0.290 Sum_probs=123.0
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+...--. .++...+..|... +.|+. ++|..+++|++++|+++++ .....++.++
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~---------~lh~~~i~h~di~p~nili~~~~~~~l~d~ 147 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMA---------YLESRNYIHRDLAARNILVGENLVCKIADF 147 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCcchheEEEcCCCCEEECcc
Confidence 56666777777766543211 1122233333333 45555 8888899999999999999 4667899999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
|.+..+..... ......+..|.+||...+ ..++...|+||+|++++++++ |+.||.+........++......+.+
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~ 226 (261)
T cd05034 148 GLARLIEDDEYTAREGAKFPIKWTAPEAANY-GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP 226 (261)
T ss_pred ccceeccchhhhhhhccCCCccccCHHHhcc-CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 98876543211 111223356899998864 346889999999999999998 99999988777777776665555555
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+..+..+...++...+.+|+++.+++.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 666778888888889889999999988753
No 248
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.51 E-value=6.8e-14 Score=111.13 Aligned_cols=137 Identities=34% Similarity=0.596 Sum_probs=104.8
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|..++.|++++|.++++ .....++.+++.+........ .....++..|++||++.+...++...|+||+|++++++
T Consensus 114 ~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l 193 (283)
T cd07835 114 YCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEM 193 (283)
T ss_pred HHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHH
Confidence 7888889999999999999 466789999998876533211 12223466799999886555578899999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCCCC----------------------------cchhhhhhhhccccCCCCCcc
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKDSW----------------------------PLGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~ 226 (234)
++|.+||++....+...++++..+.|....| +..+..+...|+..++.+|++
T Consensus 194 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 273 (283)
T cd07835 194 VNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS 273 (283)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC
Confidence 9999999998888887777766554443222 234555677788889999999
Q ss_pred ccccCCC
Q 026720 227 LLAVMPS 233 (234)
Q Consensus 227 ~~~~~~~ 233 (234)
+++++..
T Consensus 274 ~~~il~~ 280 (283)
T cd07835 274 AKAALQH 280 (283)
T ss_pred HHHHhcC
Confidence 9998764
No 249
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=2.2e-14 Score=117.76 Aligned_cols=179 Identities=18% Similarity=0.270 Sum_probs=134.4
Q ss_pred hHHHHHHHHHHHhhcCChHHHHHHHHh-hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe--eCCe
Q 026720 44 DVAIGTALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV--SKGV 119 (234)
Q Consensus 44 ~~~~~~~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~--~~~~ 119 (234)
|..|--+||.+++..|++-+-+.-.++ +.+.-..-|-++ +.+.. +.|+--++|++++|.|+.| .-++
T Consensus 87 DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~---------YCHqLHVVHRDLKPENVVFFEKlGl 157 (864)
T KOG4717|consen 87 DTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAIS---------YCHQLHVVHRDLKPENVVFFEKLGL 157 (864)
T ss_pred cccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHH---------HHhhhhhhcccCCcceeEEeeecCc
Confidence 333444567777777777665433222 222222344444 66665 6666558999999999988 4678
Q ss_pred eeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh-hC
Q 026720 120 IKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL-IG 198 (234)
Q Consensus 120 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~-~~ 198 (234)
.++.|||....+.......+.+++-.|.|||++.+......++|+||+|+++|-+..|.+||....+.+.+..|++. +-
T Consensus 158 VKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt 237 (864)
T KOG4717|consen 158 VKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT 237 (864)
T ss_pred eEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc
Confidence 99999999988887777788899999999999997666679999999999999999999999999999999888874 33
Q ss_pred CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
-|+..+ +.-..+++-....++.+|-++++|.+.
T Consensus 238 vPshvS--~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 238 VPSHVS--KECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred Cchhhh--HHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 444443 345566766777788899999988764
No 250
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.51 E-value=3.8e-14 Score=110.74 Aligned_cols=173 Identities=22% Similarity=0.320 Sum_probs=119.4
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.++..|+..|++.+...-.. .++.+.+..+... +.|+. ++|..+++|++++|+|+++. ....++.+|+
T Consensus 69 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg 139 (252)
T cd05084 69 YIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGME---------YLESKHCIHRDLAARNCLVTEKNVLKISDFG 139 (252)
T ss_pred EEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCccccccchheEEEcCCCcEEECccc
Confidence 46777888888876543211 1222233333333 55555 78888899999999999994 5678999999
Q ss_pred ccccccCCCCCC--Cc-ccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 127 MVKEIDSNLPCT--DY-VTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 127 ~a~~~~~~~~~~--~~-~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
.+.......... .. .....|.+||.+.+. .++...|+||+|++++|+++ |..||......+....+......+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 218 (252)
T cd05084 140 MSREEEDGVYASTGGMKQIPVKWTAPEALNYG-RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCP 218 (252)
T ss_pred cCcccccccccccCCCCCCceeecCchhhcCC-CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCc
Confidence 887644321110 01 112358999988643 47889999999999999997 88888766655444334333334445
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..++..+..+...|+...+.+|+++.+++.
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 566778888999999999999999998764
No 251
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.51 E-value=1.2e-13 Score=114.92 Aligned_cols=136 Identities=25% Similarity=0.366 Sum_probs=95.4
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCC--CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSN--LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|+|+++ .....+++|||.+...... .......+++.|++||++.+ ..|+..+|+||+|++++|
T Consensus 197 ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~e 275 (391)
T PHA03212 197 YLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR-DPYGPAVDIWSAGIVLFE 275 (391)
T ss_pred HHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcC-CCCCcHHHHHHHHHHHHH
Confidence 8899999999999999999 4567899999998653221 12234568889999999874 447899999999999999
Q ss_pred HHhCCCCCCCCC-------hHHHHHHHHHhhCCCCCC----------------------------CC------cchhhhh
Q 026720 174 MLSFGILFPGKS-------SADQIYKICQLIGSPTKD----------------------------SW------PLGIQLA 212 (234)
Q Consensus 174 ~~~~~~~f~~~~-------~~~~~~~i~~~~~~~~~~----------------------------~~------~~~~~~~ 212 (234)
+++|..||.+.. ....+..+.+..+.++.. .| +..+..+
T Consensus 276 lltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 355 (391)
T PHA03212 276 MATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYL 355 (391)
T ss_pred HHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHH
Confidence 999997664321 223333344433322111 11 1234445
Q ss_pred hhhccccCCCCCccccccCCC
Q 026720 213 SNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+...++.+|++.++++.+
T Consensus 356 i~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 356 ICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHHhcCChhhCCCHHHHhcC
Confidence 666778889999999998764
No 252
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.51 E-value=5.2e-14 Score=112.76 Aligned_cols=173 Identities=22% Similarity=0.359 Sum_probs=120.3
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..+|..|+..|.+.+...- ..+....+..+.. ++.|+. ++|..++.|++++|+++++ .+...++.+||
T Consensus 92 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~---------~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg 161 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALE---------FLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 161 (296)
T ss_pred EEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEEcCCCCEEECccc
Confidence 4577788888888775421 1112222223322 355555 8899999999999999999 45678999999
Q ss_pred ccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC---CC
Q 026720 127 MVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP---TK 202 (234)
Q Consensus 127 ~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~---~~ 202 (234)
.+........ .....+++.|.+||.... ..++...|+||+|++++++++|+.||.+.........+.. .+.+ .+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~ 239 (296)
T cd06654 162 FCAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNP 239 (296)
T ss_pred cchhccccccccCcccCCccccCHHHHcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc-CCCCCCCCc
Confidence 8776533221 122456678999998864 3467899999999999999999999987766554443322 1222 22
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..+..++..|+..++..|+++++++..
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred cccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 3345567778888999999999999998763
No 253
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.51 E-value=3.7e-14 Score=111.40 Aligned_cols=174 Identities=21% Similarity=0.332 Sum_probs=121.9
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
..++..|+..|.+.+...--. .++...+..|.. ++.++. ++|..+++|++++|+|+++ .....++.+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~---------~lH~~~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA---------FIEQRNYIHRDLRAANILVSASLVCKIAD 145 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH---------HHHhCCccccccCcceEEEcCCCcEEECC
Confidence 356777888888776543211 011112233333 244555 7888899999999999999 456789999
Q ss_pred ccccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 125 LGMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
++.+..+..... ......+..|.+||.... ..++...|+||+|++++++++ |..||++....+....+.+....+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T cd05073 146 FGLARVIEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 224 (260)
T ss_pred CcceeeccCCCcccccCCcccccccCHhHhcc-CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCC
Confidence 998876543211 111223455899998864 347889999999999999998 8999998777666655555444445
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
....+..+..+...|+..++.+|+++.+++.
T Consensus 225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 225 PENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred cccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 5567778888888999999999999887753
No 254
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.51 E-value=3.1e-14 Score=112.99 Aligned_cols=135 Identities=14% Similarity=0.201 Sum_probs=101.7
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|++++|.++++ .....++.++|.++.+..... .....++..|++||.... ..++..+|+||+|+++|
T Consensus 132 ~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~ 210 (280)
T cd05043 132 YLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDVWSFGVLLW 210 (280)
T ss_pred HHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhHHHhHHHHH
Confidence 8899999999999999999 456789999999876543211 111233456899998863 34788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |+.||.+....+....+......+.....++.+..+...|+..++.+||++.+++.
T Consensus 211 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 211 ELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9998 99999887665554444333332334445677888899999999999999998764
No 255
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.51 E-value=3.4e-14 Score=111.40 Aligned_cols=173 Identities=24% Similarity=0.302 Sum_probs=123.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...--..+++..+..|... +.++. ++|..++.|++++|.++++ .....++.+++.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~---------~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALE---------YLHSKGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 345567777777665432212222233333333 55666 8898899999999999999 456789999998
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhhCCCCCCCC
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSS--ADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~--~~~~~~i~~~~~~~~~~~~ 205 (234)
+.............++..|.+||..... .++...|+||+|++++++++|..||..... .+...........+.+..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLCRQ-GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATW 225 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHccc-CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccC
Confidence 8776543333344566779999998643 378899999999999999999999997664 4444444333344555677
Q ss_pred cchhhhhhhhccccCCCCCccc--cccCC
Q 026720 206 PLGIQLASNLNWKLPQMGGVNL--LAVMP 232 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 232 (234)
+..+..++..++..++.+|+++ .+++.
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 226 STEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred cHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 8888889999999999999999 77765
No 256
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.51 E-value=4.9e-14 Score=110.61 Aligned_cols=170 Identities=22% Similarity=0.278 Sum_probs=122.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+....+-...++...+..+... +.|+. ++|..++.|++++|+++++ .....++.+|+.
T Consensus 73 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~---------~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 143 (260)
T cd05611 73 YLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVE---------DLHQRGIIHRDIKPENLLIDQTGHLKLTDFGL 143 (260)
T ss_pred EEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHeEECCCCcEEEeeccc
Confidence 577788999998886654333444444555444 66666 8899999999999999999 456788999998
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC---CCC
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT---KDS 204 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~---~~~ 204 (234)
+..... .....+...|.+||...+.. ++...|+||+|++++++++|..||.+.........+........ ...
T Consensus 144 ~~~~~~---~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T cd05611 144 SRNGLE---NKKFVGTPDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEF 219 (260)
T ss_pred ceeccc---cccCCCCcCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCccccc
Confidence 775433 22345666799999987544 78899999999999999999999987766555444433222211 123
Q ss_pred CcchhhhhhhhccccCCCCCccc---cccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNL---LAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 232 (234)
.+..+..+...++...+..|++. ++++.
T Consensus 220 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 220 CSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred CCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 46677778888888889999944 56654
No 257
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.51 E-value=1.3e-14 Score=118.02 Aligned_cols=138 Identities=30% Similarity=0.452 Sum_probs=102.1
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..+|..|+..|++.+...-.. .+++..+..|... +.|+. ++|+.+++|++++|.|+++ .....++.||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~---------~lH~~~iiHrDlkp~Nill~~~~~~kl~Df 146 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIH---------SIHQLHYVHRDIKPDNVLLDMNGHIRLADF 146 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeeccCchHHEEEcCCCCEEEEec
Confidence 468888999999988765432 2333334444433 66666 7899999999999999999 4567899999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccc----cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFS----EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~----~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~ 195 (234)
|.+........ .....+++.|++||++.+. ..++..+|+||+|++++++++|+.||.+....+...++..
T Consensus 147 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05624 147 GSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred cceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc
Confidence 99876543221 1224578899999987532 3467889999999999999999999998877666665554
No 258
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.51 E-value=8.4e-14 Score=108.84 Aligned_cols=175 Identities=19% Similarity=0.311 Sum_probs=126.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHh--hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~ 124 (234)
..++..|+..|.+.+....... .+...+..+... +.++. ++|+.++.|++++|+++++. ....++.+
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~---------~lh~~~~~h~dl~~~nil~~~~~~~~l~d 146 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGME---------YLESKNFIHRDLAARNCLVGENLVVKISD 146 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHH---------HHhcCCeeecccccceEEEccCCeEEEcc
Confidence 4567778888888776544322 333344444443 66666 88888999999999999994 55789999
Q ss_pred ccccccccCCCCCCC--cccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 125 LGMVKEIDSNLPCTD--YVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~--~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
+|.+........... ...+..|.+||... ...++...|+||+|++++++++ |.+||.+....+....+......+.
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~-~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 225 (258)
T smart00219 147 FGLSRDLYDDDYYKKKGGKLPIRWMAPESLK-DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK 225 (258)
T ss_pred cCCceecccccccccccCCCcccccChHHhc-cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 998887654321111 12446789999885 4457889999999999999998 7888887666666655555444444
Q ss_pred CCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
....+..+..+.+.++..++.+|+++.+++..
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 226 PENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 55567778888889999999999999998754
No 259
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.51 E-value=3.8e-14 Score=113.62 Aligned_cols=172 Identities=19% Similarity=0.333 Sum_probs=119.9
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
++..|+..|.+.....- ..+.+..+..+... +.|+. ++|..+++|++++|.|+++ .....++.++|.+
T Consensus 95 iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~---------~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~ 164 (297)
T cd06659 95 VLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALC---------YLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFC 164 (297)
T ss_pred EEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHeEEccCCcEEEeechhH
Confidence 45556776776653221 11222333344333 66666 8898899999999999999 4677899999988
Q ss_pred ccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC--CCCCC
Q 026720 129 KEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP--TKDSW 205 (234)
Q Consensus 129 ~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~--~~~~~ 205 (234)
..+..... .....++..|.+||.+.+. .++...|+||+|++++|+++|+.||......+....+....... ....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (297)
T cd06659 165 AQISKDVPKRKSLVGTPYWMAPEVISRT-PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKI 243 (297)
T ss_pred hhcccccccccceecCccccCHHHHccC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCC
Confidence 76543322 2334567789999998643 46889999999999999999999998776666554443221111 11234
Q ss_pred cchhhhhhhhccccCCCCCccccccCCC
Q 026720 206 PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+..+..+.+.++..++.+|+++++++..
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 5667788888999999999999998763
No 260
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.51 E-value=4.3e-14 Score=113.86 Aligned_cols=172 Identities=24% Similarity=0.338 Sum_probs=120.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..|.+.+..+....+++..+..|... +.|+. ++|+ .+++|++++|+|+++ .....++.+||
T Consensus 75 ~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg 145 (308)
T cd06615 75 SICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLT---------YLREKHKIMHRDVKPSNILVNSRGEIKLCDFG 145 (308)
T ss_pred EEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhhCCEEECCCChHHEEEecCCcEEEccCC
Confidence 477788998999887654433443334444444 55666 7886 469999999999999 45678999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC-------
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS------- 199 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~------- 199 (234)
.+..+.... .....+++.|.+||...+ ..++...|+||+|++++++++|+.||++..... ...++.....
T Consensus 146 ~~~~~~~~~-~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~ 222 (308)
T cd06615 146 VSGQLIDSM-ANSFVGTRSYMSPERLQG-THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE-LEAMFGRPVSEGEAKES 222 (308)
T ss_pred Ccccccccc-cccCCCCcCccChhHhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCcchhh-HHHhhcCccccccccCC
Confidence 887665432 233567788999998764 347888999999999999999999997654322 2222211100
Q ss_pred -----------------------------C--CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 -----------------------------P--TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 -----------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
| +...++..+..++..|+...+.+|+++.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 223 HRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred cccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 011244567778888999999999999998864
No 261
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.51 E-value=6.1e-14 Score=103.73 Aligned_cols=140 Identities=16% Similarity=0.246 Sum_probs=95.2
Q ss_pred hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCCCCCcccCccccc
Q 026720 71 MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRG 148 (234)
Q Consensus 71 m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 148 (234)
+++..+..|... +.|+. ++|..+ +|.|+++. +...++ ||.+....... ..+++.|+|
T Consensus 14 l~~~~~~~i~~qi~~~L~---------~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----~~g~~~y~a 72 (176)
T smart00750 14 LNEEEIWAVCLQCLRALR---------ELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----SRVDPYFMA 72 (176)
T ss_pred CCHHHHHHHHHHHHHHHH---------HHHhcC------CcccEeEcCccceee--ccceEeecccc----CCCcccccC
Confidence 334444444444 55665 777663 89999884 444555 77766544321 256788999
Q ss_pred ccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHhhCCCC------CCCCcc--hhhhhhhhcccc
Q 026720 149 PEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQI-YKICQLIGSPT------KDSWPL--GIQLASNLNWKL 219 (234)
Q Consensus 149 pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~-~~i~~~~~~~~------~~~~~~--~~~~~~~~~~~~ 219 (234)
||++.+ ..|+.++|+||+|+++||+++|+.||.+....... ..+...+.... ...+.+ .+..+...|+..
T Consensus 73 PE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~ 151 (176)
T smart00750 73 PEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASR 151 (176)
T ss_pred hHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhc
Confidence 999974 45789999999999999999999999876544333 33333333221 122233 467788889999
Q ss_pred CCCCCccccccCC
Q 026720 220 PQMGGVNLLAVMP 232 (234)
Q Consensus 220 ~~~~~~~~~~~~~ 232 (234)
.+.+|+++.+++.
T Consensus 152 ~p~~Rp~~~~ll~ 164 (176)
T smart00750 152 LPQRREAANHYLA 164 (176)
T ss_pred ccccccCHHHHHH
Confidence 9999999998864
No 262
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.50 E-value=4.6e-14 Score=111.85 Aligned_cols=172 Identities=13% Similarity=0.171 Sum_probs=117.7
Q ss_pred HHHHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeC--------
Q 026720 48 GTALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK-------- 117 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~-------- 117 (234)
+..+|..|+..|.++...+-- ..++......+... +.|+. ++|..+++|++++|.|+++..
T Consensus 90 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~---------~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 90 ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALS---------YLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 346888999999987765321 11222333334333 45555 889999999999999999842
Q ss_pred CeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHh
Q 026720 118 GVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML-SFGILFPGKSSADQIYKICQL 196 (234)
Q Consensus 118 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~-~~~~~f~~~~~~~~~~~i~~~ 196 (234)
...++.++|.+...... ....++..|++||.+.....++...|+||+|+++||++ .|..||.+....+.. .....
T Consensus 161 ~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~ 236 (274)
T cd05076 161 PFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEK 236 (274)
T ss_pred ceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHh
Confidence 23678888876554321 12345567999998865455788999999999999985 688999876554432 33332
Q ss_pred hCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 197 IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
... .+......+..++..||...+.+|+++.+++..
T Consensus 237 ~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 237 KHR-LPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred ccC-CCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 222 222233467778888999999999999999865
No 263
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.50 E-value=5.9e-14 Score=110.26 Aligned_cols=175 Identities=21% Similarity=0.302 Sum_probs=123.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
-.++..|...|.+.+...-...++...+..|.. ++.|+. ++|+.+++|++++|+++++ .....++.+|+
T Consensus 68 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~---------~lH~~~~~h~dl~~~nilv~~~~~~~l~df~ 138 (262)
T cd05572 68 IYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFE---------YLHNRGIIYRDLKPENLLLDSNGYVKLVDFG 138 (262)
T ss_pred cEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHH---------HHhhCCcccCCCCHHHEEEcCCCCEEEeeCC
Confidence 356777888888876644322233333333433 366666 8999999999999999999 46678999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHhhC-CCCCC
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS--SADQIYKICQLIG-SPTKD 203 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~--~~~~~~~i~~~~~-~~~~~ 203 (234)
.+.............+++.|++||.+.. ..++...|+||+|++++++++|..||.+.. ......++..... .+.+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (262)
T cd05572 139 FAKKLKSGQKTWTFCGTPEYVAPEIILN-KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN 217 (262)
T ss_pred cccccCcccccccccCCcCccChhHhcC-CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCc
Confidence 9887765432333456778999998763 346888999999999999999999998765 4344444432111 12223
Q ss_pred CCcchhhhhhhhccccCCCCCcc-----ccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVN-----LLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 233 (234)
..+..+..+...++...+.+|++ +.+++++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 34667888888888888899998 7777653
No 264
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.50 E-value=4.1e-14 Score=110.35 Aligned_cols=176 Identities=19% Similarity=0.258 Sum_probs=120.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
..++..|+..|.+.+...-.. ....+...+....+..... .++|..+++|++++|+++.+ .+...++.++|.
T Consensus 67 ~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l--~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~ 139 (250)
T cd05085 67 IYIVMELVPGGDFLSFLRKKK-----DELKTKQLVKFALDAAAGM--AYLESKNCIHRDLAARNCLVGENNVLKISDFGM 139 (250)
T ss_pred cEEEEECCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHH--HHHHhCCeeecccChheEEEcCCCeEEECCCcc
Confidence 457778888888877643211 1122333222222111111 17788889999999999999 456789999998
Q ss_pred cccccCCCCCC--CcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 128 VKEIDSNLPCT--DYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 128 a~~~~~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.......... ....+..|.+||...+ ..++...|+||+|++++++++ |..||++.........+........+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 218 (250)
T cd05085 140 SRQEDDGIYSSSGLKQIPIKWTAPEALNY-GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQK 218 (250)
T ss_pred ceeccccccccCCCCCCcccccCHHHhcc-CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 87654332111 1122346899998863 447888999999999999998 8899998866665555544333333445
Q ss_pred CcchhhhhhhhccccCCCCCccccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+..+..+...|+...+.+|+++.+++.
T Consensus 219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 219 CPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 6678888889999999999999998864
No 265
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.50 E-value=4.2e-14 Score=110.69 Aligned_cols=175 Identities=20% Similarity=0.290 Sum_probs=122.7
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
-.++..|+..|.+.+...... .++.+.+..+... +.++. ++|..+++|++++|.|+.+ .+...++.++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~ 144 (256)
T cd05112 74 ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMA---------YLESSNVIHRDLAARNCLVGENQVVKVSDF 144 (256)
T ss_pred eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHH---------HHHHCCccccccccceEEEcCCCeEEECCC
Confidence 356777888888766543211 1222233334333 45555 7888889999999999999 4567899999
Q ss_pred cccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+.+........ ......+..|.+||...+ ..++...|+||+|++++|+++ |..||.+.........+.+......+
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd05112 145 GMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF-SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP 223 (256)
T ss_pred cceeecccCcccccCCCccchhhcCHhHhcc-CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC
Confidence 98776533211 112233457899998864 447889999999999999998 88999877766666555544343444
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..+..+...|+..++.+|+++.+++..
T Consensus 224 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 224 RLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 4556788888899999999999999988753
No 266
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.50 E-value=8.8e-15 Score=114.60 Aligned_cols=174 Identities=24% Similarity=0.370 Sum_probs=122.7
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a 128 (234)
++..|+..+.+.+...--..++...+..+... +.|+. ++|+.++.|++++|+|+++. ....++.|||.+
T Consensus 75 ~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~---------~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~ 145 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALA---------YLHSKGIVHRDIKPENILLDENGEVKLIDFGSS 145 (260)
T ss_dssp EEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHH---------HHHHTTEEESSBSGGGEEESTTSEEEESSGTTT
T ss_pred cccccccccccccccccccccccccccccccccccccc---------ccccccccccccccccccccccccccccccccc
Confidence 66677777777765552222222233333333 66666 89999999999999999994 677899999998
Q ss_pred ccccC-CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC---CCC
Q 026720 129 KEIDS-NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT---KDS 204 (234)
Q Consensus 129 ~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~---~~~ 204 (234)
..... ........++..|.+||.......++...|+||+|++++++++|..||.+....+....+.+....+. ...
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T PF00069_consen 146 VKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ 225 (260)
T ss_dssp EESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccc
Confidence 75311 12234456778899999986345578999999999999999999999998744444444444333211 111
Q ss_pred C---cchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 W---PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+ ...+..+...++...+.+|+++.+++++
T Consensus 226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 226 SREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1 2678888888999999999999998865
No 267
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.50 E-value=1.5e-13 Score=112.78 Aligned_cols=136 Identities=35% Similarity=0.540 Sum_probs=104.3
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|.|+++ .....++.+||.+.............++..|++||...+ ..++...|+||+|+++++++
T Consensus 133 ~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~~l~ 211 (353)
T cd07850 133 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 211 (353)
T ss_pred HHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhC-CCCCCchhhHhHHHHHHHHH
Confidence 8899999999999999999 456789999999887655433334456778999999864 44788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCC------------------------------------------CCcchhhhhh
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKD------------------------------------------SWPLGIQLAS 213 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~------------------------------------------~~~~~~~~~~ 213 (234)
+|+.||++....+...++....+.|... ..++.+..+.
T Consensus 212 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 291 (353)
T cd07850 212 RGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLL 291 (353)
T ss_pred HCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHH
Confidence 9999999887777666665544443210 1122345667
Q ss_pred hhccccCCCCCccccccCCC
Q 026720 214 NLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+...++.+|+++.+++.+
T Consensus 292 ~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 292 SKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 77888899999999998754
No 268
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.50 E-value=5.9e-14 Score=109.88 Aligned_cols=174 Identities=20% Similarity=0.289 Sum_probs=119.0
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-.. .++...+..+... +.|+. ++|..++.|++++|.++++ .....++.+|
T Consensus 71 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~---------~lH~~~i~H~di~p~nil~~~~~~~kl~df 141 (257)
T cd05040 71 MMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMR---------YLESKRFIHRDLAARNILLASDDKVKIGDF 141 (257)
T ss_pred EEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHH---------HHHhCCccccccCcccEEEecCCEEEeccc
Confidence 45556677777766543211 1112222333322 45555 7888899999999999999 4677899999
Q ss_pred cccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhC-C
Q 026720 126 GMVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIG-S 199 (234)
Q Consensus 126 ~~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~-~ 199 (234)
|.+..+..... .....++..|.+||...+ ..++...|+||+|++++++++ |..||.+....+....+..... .
T Consensus 142 g~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd05040 142 GLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL 220 (257)
T ss_pred cccccccccccceecccCCCCCceecCHHHhcc-cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC
Confidence 98877643211 111234567999998763 347888999999999999998 9999988777666555543221 1
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.+...+..+..+...|+...+.+|+++.+++..
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 2233445677778888999999999999988753
No 269
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.50 E-value=5e-14 Score=112.42 Aligned_cols=135 Identities=19% Similarity=0.277 Sum_probs=101.3
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.++++ .....++++||.+..+..... ......+..|.+||... ...++...|+||+|++++
T Consensus 142 ~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~-~~~~~~~~Di~slG~~l~ 220 (290)
T cd05045 142 YLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF-DHIYTTQSDVWSFGVLLW 220 (290)
T ss_pred HHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc-cCCcchHhHHHHHHHHHH
Confidence 7888899999999999999 456789999998876543211 11122345689999875 344788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||++.........+-+....+.+..++..+..+...|+..++.+||++.+++.
T Consensus 221 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 221 EIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9998 99999876655444333333333445566778888899999999999999998864
No 270
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.50 E-value=1.1e-13 Score=109.34 Aligned_cols=174 Identities=17% Similarity=0.188 Sum_probs=114.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhcc--C---ccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeee
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMRE--K---NLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIK 121 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~--~---~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~ 121 (234)
..++..|+..|++.+...-...... . .+..+.. ++.|+. ++|+.+++|++++|+++++. ....+
T Consensus 70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~i~H~dlkp~nil~~~~~~~k 140 (269)
T cd05087 70 YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLL---------HLHKNNFIHSDLALRNCLLTADLTVK 140 (269)
T ss_pred cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHH---------HHHHCCEeccccCcceEEEcCCCcEE
Confidence 4577888888988776543221111 1 1122322 244555 78888999999999999994 56789
Q ss_pred EeeccccccccCCC---CCCCcccCccccccccccccc------CCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 026720 122 IGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSE------IYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIY 191 (234)
Q Consensus 122 ~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~------~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~ 191 (234)
+.|||.+....... ......++..|++||++.... .++...|+||+|++++|+++ |+.||+.....+...
T Consensus 141 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~ 220 (269)
T cd05087 141 IGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT 220 (269)
T ss_pred ECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH
Confidence 99999886543321 111234456799999875321 24678999999999999996 999998776665544
Q ss_pred HHHHhhCC--CCC---CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 192 KICQLIGS--PTK---DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 192 ~i~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
........ +++ ...++.+..+++.||. ++.+||++++|..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~-~P~~Rpt~~~l~~ 265 (269)
T cd05087 221 YTVREQQLKLPKPRLKLPLSDRWYEVMQFCWL-QPEQRPSAEEVHL 265 (269)
T ss_pred HHhhcccCCCCCCccCCCCChHHHHHHHHHhc-CcccCCCHHHHHH
Confidence 33322111 111 1334566678888995 6789999998863
No 271
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.50 E-value=6.6e-14 Score=109.62 Aligned_cols=171 Identities=19% Similarity=0.304 Sum_probs=118.7
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.++..|+..|.+.+..+--. .+..+.+..+... +.++. ++|..++.|++++|.++++. ....++.++
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~---------~lh~~~i~H~di~p~Nili~~~~~~~l~d~ 146 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGME---------YLEEKNFVHRDLAARNVLVSEDLVAKVSDF 146 (256)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCccchhcccceEEEeCCCCEEEccc
Confidence 46666777777766543211 1222223333333 55666 88988999999999999994 567899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.+........ .......|.+||.... ..++...|+||+|++++++++ |..||......+....+........+..
T Consensus 147 g~~~~~~~~~~--~~~~~~~~~ape~~~~-~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd05039 147 GLAKEASQGQD--SGKLPVKWTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEG 223 (256)
T ss_pred ccccccccccc--cCCCcccccCchhhcC-CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccC
Confidence 98887643221 2233456899998763 347789999999999999997 8899987765554444433323333445
Q ss_pred CcchhhhhhhhccccCCCCCccccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.++.+..+...|+...+.+|+++++++.
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 6677888888899989999999998864
No 272
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.50 E-value=5.1e-14 Score=110.07 Aligned_cols=174 Identities=20% Similarity=0.321 Sum_probs=120.5
Q ss_pred HHHHHHhhcCChHHHHHHHHh-hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|+..+.+.+....... ++...+..+.. ++.|+. ++|..++.|++++|+++.+ .....++.+++
T Consensus 74 ~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~---------~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg 144 (256)
T cd06612 74 WIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLE---------YLHSNKKIHRDIKAGNILLNEEGQAKLADFG 144 (256)
T ss_pred EEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCcceEEECCCCcEEEcccc
Confidence 456777787888776543221 12222223333 255666 7888889999999999999 46678999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC--CCCC
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS--PTKD 203 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~--~~~~ 203 (234)
.+..+.... ......++..|.+||.+.+ ..++...|+||+|++++++++|+.||.+.........+...... ..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd06612 145 VSGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPE 223 (256)
T ss_pred cchhcccCccccccccCCccccCHHHHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchh
Confidence 888765432 1222345678999999864 34788999999999999999999999876554443332221111 1123
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.++..+..+++.|+..++.+|+++.+++..
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 455677788888999999999999998864
No 273
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.50 E-value=4.3e-14 Score=112.06 Aligned_cols=175 Identities=17% Similarity=0.249 Sum_probs=119.8
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
+..++..|+..|.+.+..+- ..+++..+..+... +.++. ++|..+++|++++|.++++. ....++.++
T Consensus 76 ~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~---------~lh~~~ivH~dl~p~Nil~~~~~~~~l~df 145 (277)
T cd06640 76 KLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLD---------YLHSEKKIHRDIKAANVLLSEQGDVKLADF 145 (277)
T ss_pred EEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHH---------HHHhCCccCcCCChhhEEEcCCCCEEEccc
Confidence 35677788888888765431 11222222233222 44444 78888899999999999994 567889999
Q ss_pred cccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.+..+.... ......++..|.+||...+. .++...|+||+|++++|+++|..||.+.........+.......-...
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~y~apE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (277)
T cd06640 146 GVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS-AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGE 224 (277)
T ss_pred ccceeccCCccccccccCcccccCHhHhccC-CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchh
Confidence 9887654322 12233456678999998643 368899999999999999999999987665544433322111111223
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...|+...+.+|+++++++..
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 45567778888999999999999998764
No 274
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.50 E-value=5.6e-14 Score=110.90 Aligned_cols=173 Identities=20% Similarity=0.293 Sum_probs=121.6
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.++..|+..|.+.+...-.. .++...+..+. .++.|+. ++|..+++|++++|+++++. ....++.+++
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~~~H~dl~p~nili~~~~~~~l~d~g 152 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALA---------YLESKRFVHRDIAARNVLVSSPDCVKLGDFG 152 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccccChheEEEecCCCeEEccCc
Confidence 36667888888876543211 12222222222 2355555 78888999999999999994 5678999999
Q ss_pred ccccccCCCCCC--CcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 127 MVKEIDSNLPCT--DYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 127 ~a~~~~~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
.+.......... ....+..|++||.... ..++...|+||+|++++|+++ |..||.+....+...++.+....+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (270)
T cd05056 153 LSRYLEDESYYKASKGKLPIKWMAPESINF-RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPP 231 (270)
T ss_pred eeeecccccceecCCCCccccccChhhhcc-CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCC
Confidence 887654432111 1122346899998763 447889999999999999986 999999888777766665544444455
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..+..+..++..++...+.+|+++.+++.
T Consensus 232 ~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 232 NCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 66678888888899999999999988764
No 275
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.49 E-value=4.3e-14 Score=110.61 Aligned_cols=174 Identities=21% Similarity=0.429 Sum_probs=124.6
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.++..|+..+.+.+....-. ..++..+..|... +.++. ++|..++.|++++|.++++. ....++.++
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~i~h~~l~~~nil~~~~~~~~l~d~ 145 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK---------HVHDRKILHRDIKSQNIFLTKDGTIKLGDF 145 (256)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEecCCCCHHHEEEcCCCCEEEeec
Confidence 46677777777765433211 1122223333333 55555 78888999999999999994 567899999
Q ss_pred cccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC
Q 026720 126 GMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 126 ~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~ 204 (234)
+.+........ .....++..|.+||...+. .++.+.|+||+|++++++++|+.||......+...++......+.+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd08218 146 GIARVLNSTVELARTCIGTPYYLSPEICENR-PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSH 224 (256)
T ss_pred cceeecCcchhhhhhccCCccccCHHHhCCC-CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCccc
Confidence 98876544221 1223456679999998643 467889999999999999999999998777777666654443344556
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
++..+..++..|+...+.+|+++.+++.+
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 225 YSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 67778888889999999999999999865
No 276
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.49 E-value=1.5e-13 Score=107.38 Aligned_cols=173 Identities=27% Similarity=0.423 Sum_probs=124.0
Q ss_pred HHHHHHhhcCChHHHHHHHHh----hccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----MREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.++..|+..+++.+...--.. +....+..+. .++.|+. ++|..++.|++++|+++.+ .....++.
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~---------~lh~~~i~h~~l~~~ni~~~~~~~~kl~ 145 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQ---------ALHEQKILHRDLKSANILLVANDLVKIG 145 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHH---------HHhhCCcccCCCCcceEEEecCCcEEEe
Confidence 456667777777665432110 1111222232 2355666 7888889999999999999 45678999
Q ss_pred eccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 124 DLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 124 ~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
+++.+....... .....++..|.+||...+ ..++...|+||+|++++++++|..||...........+......+.+.
T Consensus 146 d~g~~~~~~~~~-~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd08530 146 DLGISKVLKKNM-AKTQIGTPHYMAPEVWKG-RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPP 223 (256)
T ss_pred eccchhhhccCC-cccccCCccccCHHHHCC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCch
Confidence 999887765542 223456678999999864 446778999999999999999999999877665555554433334445
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.++..+..+...++..++.+|+++.+++..
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 677778888888999999999999998764
No 277
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.49 E-value=5.1e-14 Score=113.35 Aligned_cols=181 Identities=19% Similarity=0.312 Sum_probs=119.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHh--h-------c-cCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL--M-------R-EKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K 117 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~--m-------~-~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~ 117 (234)
..++..|+..|.+.+...-... + . .....++..++....+.....+ ++|..+++|++++|+|+++. .
T Consensus 99 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~--~lH~~gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 99 LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGME--YLASKKCIHRDLAARNVLVTED 176 (307)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHH--HHHHCCcccccccHHheEEcCC
Confidence 3467778888888776543211 0 0 0123455444433332222222 78888999999999999994 5
Q ss_pred CeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 026720 118 GVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKI 193 (234)
Q Consensus 118 ~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i 193 (234)
...+++++|.+........ ......+..|++||.+.+ ..++...|+||+|++++++++ |..||++....+....+
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~ 255 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 255 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 6789999998876543211 111122356999998864 447889999999999999998 88899876543333333
Q ss_pred HHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 194 CQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
-.....+.+...+..+..+...|+...+.+|+++.+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 256 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 222222333456677888888899999999999998864
No 278
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.49 E-value=5.2e-14 Score=110.25 Aligned_cols=172 Identities=19% Similarity=0.187 Sum_probs=117.4
Q ss_pred HHHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CC------
Q 026720 48 GTALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KG------ 118 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~------ 118 (234)
...++..|+..|.+.+-..... .++...+..+... +.|+. ++|..+++|++++|.|+++. ..
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~---------~LH~~~i~H~dlkp~Nill~~~~~~~~~~ 144 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALH---------YLEDKKLVHGNVCGKNILVARYGLNEGYV 144 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHH---------HHhhCCeecccCccceEEEecCccccCCc
Confidence 3457778888888877544322 2333333444332 55566 88998999999999999994 33
Q ss_pred -eeeEeeccccccccCCCCCCCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 026720 119 -VIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 119 -~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~ 195 (234)
..+++|++.+...... ....+...|.+||.+.+. ..++...|+||+|++++++++ +..||........ ...+.
T Consensus 145 ~~~kl~Dfg~a~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-~~~~~ 220 (259)
T cd05037 145 PFIKLSDPGIPITVLSR---EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-ERFYQ 220 (259)
T ss_pred eeEEeCCCCcccccccc---cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-HHHHh
Confidence 5899999988875441 223445678999998654 357889999999999999998 4677766543222 22222
Q ss_pred hhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 196 LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. ....+......+..+...|+..++.+|+++.+++..
T Consensus 221 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 257 (259)
T cd05037 221 D-QHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRD 257 (259)
T ss_pred c-CCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 2 222222233577788888999999999999998764
No 279
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.49 E-value=3.3e-14 Score=123.99 Aligned_cols=197 Identities=15% Similarity=0.209 Sum_probs=134.9
Q ss_pred HHHHHHhccchhHHHH---------HHHHHHHhhcCChHHHHHHHH---hhccC-------ccccHHHHHHHHHhcCCch
Q 026720 33 HSYAVVNGLELDVAIG---------TALVEMYSKCGHVEKAFKVFN---LMREK-------NLQSWTIMISGLADNSRGN 93 (234)
Q Consensus 33 ~~~~~~~g~~~~~~~~---------~~li~~~~~~g~~~~a~~~~~---~m~~~-------~~~~~~~~i~~~~~~g~~~ 93 (234)
...|...|-.+|+++. ..+|..|+..|++.+-.+--+ ..... +..+..-+++.--|..++.
T Consensus 352 l~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GM 431 (609)
T KOG0200|consen 352 LNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGM 431 (609)
T ss_pred HHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHH
Confidence 3344455666665432 456778999999888765544 11111 1233333333333333333
Q ss_pred hhhHhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCCCC--Ccc--cCcccccccccccccCCCCcchHHHHH
Q 026720 94 DAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLPCT--DYV--TTRWYRGPEVLLFSEIYGPEVDKWAMG 168 (234)
Q Consensus 94 ~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~--~~~--~~~~~~~pe~~~~~~~~~~~~d~~s~g 168 (234)
+ ++.+..++|+|+..-|+++. ...++++|||+++.....-... ... ....|+|||.+.. ..|+.++|+||+|
T Consensus 432 e--~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSDVWSfG 508 (609)
T KOG0200|consen 432 E--YLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSDVWSFG 508 (609)
T ss_pred H--HHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-CcccccchhhHHH
Confidence 3 77777789999999999995 5588999999999655432211 111 2234899999975 6699999999999
Q ss_pred HHHHHHHh-CCCCCCCCC-hHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 169 AIMFEMLS-FGILFPGKS-SADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 169 ~~l~e~~~-~~~~f~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+++||+++ |..||++.. ..+....+-+......+..++..+=.+++.||+..+.+||+|.++.+
T Consensus 509 I~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 509 ILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 99999996 669999976 55554434444444666777778888999999999999999998753
No 280
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.49 E-value=4.4e-14 Score=111.48 Aligned_cols=173 Identities=19% Similarity=0.320 Sum_probs=120.6
Q ss_pred HHHHHHhhcCChHHHHHHHHh-hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.++..|+..|.+++-.+.... +....+..+.. ++.|+. ++|..+++|++++|+++++. ....++.+|+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~---------~lH~~g~~H~dl~p~nili~~~~~~kl~dfg 151 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMK---------YLSEMNYVHRDLAARNILVNSNLVCKVSDFG 151 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHH---------HHHHCCEeecccChheEEEcCCCcEEECCCc
Confidence 466778888887665332111 11122222322 245555 78888999999999999994 5677899999
Q ss_pred ccccccCCCCCCCc------ccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCC
Q 026720 127 MVKEIDSNLPCTDY------VTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 127 ~a~~~~~~~~~~~~------~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
.+............ ..+..|.+||...+ ..++...|+||+|++++|+++ |..||.+....+....+......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~ 230 (269)
T cd05065 152 LSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRL 230 (269)
T ss_pred cccccccCccccccccccCCCcceeecCHhHhcc-CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence 87655332111111 11235899999864 347889999999999999886 89999887777666666554445
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|.+...+..+..+...|+...+.+||++++++.
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 231 PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 555667778888999999999999999998764
No 281
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.49 E-value=1.1e-13 Score=112.75 Aligned_cols=137 Identities=34% Similarity=0.564 Sum_probs=102.5
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIM 171 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l 171 (234)
++|..+++|++++|.|+++ .....++.+||.+........ .....++..|++||.+.....++...|+||+|+++
T Consensus 121 ~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil 200 (336)
T cd07849 121 YIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCIL 200 (336)
T ss_pred HHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHH
Confidence 8899999999999999999 456789999998876543211 12245677899999875445578899999999999
Q ss_pred HHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC------------------------------CcchhhhhhhhccccCC
Q 026720 172 FEMLSFGILFPGKSSADQIYKICQLIGSPTKDS------------------------------WPLGIQLASNLNWKLPQ 221 (234)
Q Consensus 172 ~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~ 221 (234)
+++++|++||++.........+.+..+.+.... .+..+..+...++...+
T Consensus 201 ~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP 280 (336)
T cd07849 201 AEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNP 280 (336)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCCh
Confidence 999999999998776666555555444432211 12345566777888899
Q ss_pred CCCccccccCCC
Q 026720 222 MGGVNLLAVMPS 233 (234)
Q Consensus 222 ~~~~~~~~~~~~ 233 (234)
.+|+++.+++++
T Consensus 281 ~~Rpt~~e~l~h 292 (336)
T cd07849 281 HKRITVEEALAH 292 (336)
T ss_pred hhCcCHHHHhcC
Confidence 999999998764
No 282
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.49 E-value=5.9e-14 Score=112.13 Aligned_cols=142 Identities=26% Similarity=0.365 Sum_probs=108.9
Q ss_pred HHHHHHHHhhcCChHHHHHHH--HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 48 GTALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~--~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
|.+|+..||..|++..+++-- ...++..+..|.+= +.|+- +||-.+++.+|++|+|+++ .++...+.
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALE---------YLHmlGivYRDLKPENILvredGHIMLs 221 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALE---------YLHMLGIVYRDLKPENILVREDGHIMLS 221 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHH---------HHHhhceeeccCCcceeEEecCCcEEee
Confidence 678999999999998886531 12334456667665 66777 8999999999999999999 67888888
Q ss_pred eccccccccC-----------------------------C----------------------------CCCCCcccCccc
Q 026720 124 DLGMVKEIDS-----------------------------N----------------------------LPCTDYVTTRWY 146 (234)
Q Consensus 124 ~~~~a~~~~~-----------------------------~----------------------------~~~~~~~~~~~~ 146 (234)
||.+..+... . ...+.++++.-|
T Consensus 222 DFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEY 301 (459)
T KOG0610|consen 222 DFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEY 301 (459)
T ss_pred eccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccc
Confidence 8876543200 0 011234566779
Q ss_pred ccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 147 RGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 147 ~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
.|||++.+.. ...++|.|++|+++|||+.|..||.|.++.+.+..|..+-..
T Consensus 302 lAPEvI~G~G-HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~ 353 (459)
T KOG0610|consen 302 LAPEVIRGEG-HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK 353 (459)
T ss_pred ccceeeecCC-CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc
Confidence 9999998655 478999999999999999999999999999998887665443
No 283
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.49 E-value=7.5e-14 Score=111.44 Aligned_cols=169 Identities=25% Similarity=0.296 Sum_probs=121.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.+..+-...++...+..|... +.|+. ++|..+++|++++|.++++ .....++.+|+.
T Consensus 77 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~---------~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 77 YLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALE---------YLHSLDIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 466778878888766544333443333444333 66666 8899999999999999999 466789999998
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcc
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPL 207 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 207 (234)
+...... .....+++.|.+||.+... .++...|+||+|++++++++|..||.+.........+... ..+-+..++.
T Consensus 148 ~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~ 223 (290)
T cd05580 148 AKRVKGR--TYTLCGTPEYLAPEIILSK-GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG-KVRFPSFFSP 223 (290)
T ss_pred ccccCCC--CCCCCCCccccChhhhcCC-CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CccCCccCCH
Confidence 8876543 2334567789999988643 4678899999999999999999999877755544444422 2233445677
Q ss_pred hhhhhhhhccccCCCCCc-----cccccC
Q 026720 208 GIQLASNLNWKLPQMGGV-----NLLAVM 231 (234)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~-----~~~~~~ 231 (234)
.+..+.+.++...+.+|+ ++++++
T Consensus 224 ~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 224 DAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred HHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 888888888888888887 555554
No 284
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.49 E-value=1.8e-13 Score=110.02 Aligned_cols=137 Identities=34% Similarity=0.606 Sum_probs=104.0
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC------------CCCcccCcccccccccccccCCCCcch
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP------------CTDYVTTRWYRGPEVLLFSEIYGPEVD 163 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~------------~~~~~~~~~~~~pe~~~~~~~~~~~~d 163 (234)
++|..++.|++++|.++++ .....++.+++.+........ .....+++.|.+||...+...++...|
T Consensus 130 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 209 (311)
T cd07866 130 YLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD 209 (311)
T ss_pred HHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence 7899999999999999999 456789999998875533211 112244667999998765555788999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc-----------------------------chhhhhhh
Q 026720 164 KWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP-----------------------------LGIQLASN 214 (234)
Q Consensus 164 ~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~-----------------------------~~~~~~~~ 214 (234)
+||+|++++|+++|++||.+.........++...+.+.+..|+ ..+..+..
T Consensus 210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 289 (311)
T cd07866 210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLS 289 (311)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHH
Confidence 9999999999999999999988888888887766654433222 23345666
Q ss_pred hccccCCCCCccccccCCC
Q 026720 215 LNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (234)
.+....+.+|++..+++.+
T Consensus 290 ~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 290 KLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHcccCcccCcCHHHHhcC
Confidence 6777788999999988764
No 285
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=2.3e-14 Score=126.63 Aligned_cols=156 Identities=31% Similarity=0.424 Sum_probs=124.2
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
|-+||+.|+-.|++-....-|+.+|+.-...|++= +-|+. .+|..+.+|+|++|||+++ ..++.++.||
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAld---------slH~mgyVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALD---------SLHSMGYVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHH---------HHHhccceeccCCcceeEecccCcEeeccc
Confidence 34688899999999999988888888777777765 66676 7899999999999999999 5789999999
Q ss_pred cccccccCC--CCCCCcccCccccccccccc----ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH---h
Q 026720 126 GMVKEIDSN--LPCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ---L 196 (234)
Q Consensus 126 ~~a~~~~~~--~~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~---~ 196 (234)
|.+..+... ......+|||-|.+||++.. ...|..-.|.||+|+++|||+.|..||+.+...+.--+|.. .
T Consensus 220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~ 299 (1317)
T KOG0612|consen 220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES 299 (1317)
T ss_pred hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh
Confidence 999887532 23455789999999999843 24588999999999999999999999998887777777765 3
Q ss_pred hCCCCCCCCcchhhhh
Q 026720 197 IGSPTKDSWPLGIQLA 212 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~ 212 (234)
...|+....++....+
T Consensus 300 l~FP~~~~VSeeakdL 315 (1317)
T KOG0612|consen 300 LSFPDETDVSEEAKDL 315 (1317)
T ss_pred cCCCcccccCHHHHHH
Confidence 4456444444443333
No 286
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.49 E-value=1.3e-13 Score=112.36 Aligned_cols=137 Identities=35% Similarity=0.527 Sum_probs=104.2
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC------CCCCcccCcccccccccccccCCCCcchHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGA 169 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~ 169 (234)
++|..++.|++++|.++++ ..+..+++++|.+..+.... ......++..|++||.+.+...++..+|+||+|+
T Consensus 122 ~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~ 201 (337)
T cd07852 122 YIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGC 201 (337)
T ss_pred HHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHH
Confidence 7898899999999999999 46778999999887654321 1223456778999998865555788999999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC------------------------------CCCcchhhhhhhhcccc
Q 026720 170 IMFEMLSFGILFPGKSSADQIYKICQLIGSPTK------------------------------DSWPLGIQLASNLNWKL 219 (234)
Q Consensus 170 ~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~ 219 (234)
+++++++|+.||++....+...++....+.+.. ...+..+..++..++..
T Consensus 202 ~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 281 (337)
T cd07852 202 ILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVF 281 (337)
T ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccC
Confidence 999999999999988777766665554433221 11234455667778888
Q ss_pred CCCCCccccccCCC
Q 026720 220 PQMGGVNLLAVMPS 233 (234)
Q Consensus 220 ~~~~~~~~~~~~~~ 233 (234)
.+.+|+++.++++.
T Consensus 282 ~P~~Rps~~~il~~ 295 (337)
T cd07852 282 NPNKRLTAEEALEH 295 (337)
T ss_pred CcccccCHHHHhhC
Confidence 99999999988764
No 287
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.48 E-value=8.2e-14 Score=110.00 Aligned_cols=172 Identities=20% Similarity=0.235 Sum_probs=121.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CC-eeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KG-VIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~-~~~~~~~ 125 (234)
..+|..|+..|++.+...--..++++.+..|... +.|+. ++|+.+++|++++|.++++. .. ..+++++
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALN---------DLHKHNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 4677788888888876543333444455555554 66666 89999999999999999994 44 6889999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhhCC--CCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQ-IYKICQLIGS--PTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~-~~~i~~~~~~--~~~ 202 (234)
+.+...... ....++..|++||++.+ ..++...|+||+|++++++++|..||.+....+. .......... +..
T Consensus 155 g~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T PHA03390 155 GLCKIIGTP---SCYDGTLDYFSPEKIKG-HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFI 230 (267)
T ss_pred ccceecCCC---ccCCCCCcccChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcc
Confidence 987765432 22356778999999864 3478889999999999999999999986543322 1222222221 222
Q ss_pred CCCcchhhhhhhhccccCCCCCc-cccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGV-NLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 233 (234)
...+..+..++..++...+.+|+ ++++++++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 34667777777778888888887 57988764
No 288
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.48 E-value=8.2e-14 Score=113.49 Aligned_cols=173 Identities=18% Similarity=0.314 Sum_probs=119.8
Q ss_pred HHHHHHhhcCChHHHHHHHHh--h--------ccCccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCcCCCc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--M--------REKNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDLKPSN 112 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m--------~~~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~ 112 (234)
.++..|+..|.+.+....... + ......+|... +.|+. ++|..+++|++++|+|
T Consensus 94 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~---------~LH~~givH~dlkp~N 164 (334)
T cd05100 94 YVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGME---------YLASQKCIHRDLAARN 164 (334)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHH---------HHHHCCeeccccccce
Confidence 466778888888765432110 0 00122344332 44555 7898899999999999
Q ss_pred EEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChH
Q 026720 113 LLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSA 187 (234)
Q Consensus 113 ~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~ 187 (234)
+++. ....++++|+.+........ ......+..|++||...+ ..++...|+||+|++++|+++ |..||++....
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 243 (334)
T cd05100 165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 243 (334)
T ss_pred EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 9994 66789999998876543211 111122346899998863 447889999999999999998 88999887665
Q ss_pred HHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 188 DQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 188 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+....+......+.+...+..+..+...|+...+.+|+++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 244 ELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 555445444333444455667888888999999999999998864
No 289
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.48 E-value=6.1e-14 Score=111.09 Aligned_cols=172 Identities=20% Similarity=0.353 Sum_probs=117.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+..+. ..++...+..+... +.++. ++|..++.|++++|+++.+ .....++.+++.
T Consensus 78 ~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~---------~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~ 147 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALK---------YIHKVGVIHRDIKAANILVTNTGNVKLCDFGV 147 (277)
T ss_pred EEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCcCHHHEEEcCCCCEEEccCCc
Confidence 466777888877664322 11222222222222 44444 7888899999999999999 467789999998
Q ss_pred cccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC--CCC
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT--KDS 204 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~--~~~ 204 (234)
+........ .....++..|.+||.......++...|+||+|+++|++++|..||.+.........+.. ...+. ...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~ 226 (277)
T cd06917 148 AALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK-SKPPRLEDNG 226 (277)
T ss_pred eeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc-CCCCCCCccc
Confidence 876544321 22345667799999886545568899999999999999999999987654433222211 11111 122
Q ss_pred CcchhhhhhhhccccCCCCCccccccCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
++..+..+...|+..++.+|+++.+++.
T Consensus 227 ~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 227 YSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 5667778888899999999999998865
No 290
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.48 E-value=8.2e-14 Score=109.64 Aligned_cols=172 Identities=23% Similarity=0.327 Sum_probs=118.9
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
++..|...+.+.+...-...++...+..|... +.++. ++|..+++|++++|.++.+ .+...++.+||.+
T Consensus 83 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~---------~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 153 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVS---------YLHSNMIVHRDIKGANILRDSAGNVKLGDFGAS 153 (264)
T ss_pred EEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhCCEecCCCCHHHEEEcCCCCEEECccccc
Confidence 45567777777665443222333333444443 55566 8899999999999999999 4566889999988
Q ss_pred ccccCCC----CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC-CCC
Q 026720 129 KEIDSNL----PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP-TKD 203 (234)
Q Consensus 129 ~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~-~~~ 203 (234)
....... ......++..|.+||...+ ..++...|+||+|++++++++|++||.+........++......+ -+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~ 232 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISG-EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPD 232 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcC-CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCc
Confidence 8654311 1123456778999999864 336788999999999999999999998876666554443221111 234
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..++.+..+.+.++..+ ..|++.++++.+
T Consensus 233 ~~~~~~~~~i~~~l~~~-~~r~~~~~~~~~ 261 (264)
T cd06653 233 GVSDACRDFLKQIFVEE-KRRPTAEFLLRH 261 (264)
T ss_pred ccCHHHHHHHHHHhcCc-ccCccHHHHhcC
Confidence 55567888888888754 999999888764
No 291
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.48 E-value=7.5e-14 Score=109.76 Aligned_cols=174 Identities=20% Similarity=0.267 Sum_probs=120.4
Q ss_pred HHHHHhhcCChHHHHHHHH---hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 51 LVEMYSKCGHVEKAFKVFN---LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~---~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
++..|+..+.+.+..+--. .+++..+..+.. ++.++. ++|..++.|++++|+++.+. ....++.++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~---------~lh~~~i~h~~l~p~ni~~~~~~~~~l~df 146 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLE---------YLHSNGQIHRDIKAGNILLGEDGSVKIADF 146 (267)
T ss_pred EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHhEEEcCCCCEEEccc
Confidence 6666777777766543211 122223333333 366666 88999999999999999994 567889999
Q ss_pred cccccccCCCCC-----CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC
Q 026720 126 GMVKEIDSNLPC-----TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP 200 (234)
Q Consensus 126 ~~a~~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~ 200 (234)
+.+......... ....++..|++||.+.....++...|+||+|++++++++|+.||.+........++.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 226 (267)
T cd06610 147 GVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPS 226 (267)
T ss_pred chHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCC
Confidence 987765442211 223567789999998644357889999999999999999999998776665555544431111
Q ss_pred CC-----CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TK-----DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.. ...+..+..+...|+...+.+|+++++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 227 LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11 1334566777888888889999999998864
No 292
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.48 E-value=6.4e-14 Score=110.46 Aligned_cols=174 Identities=21% Similarity=0.328 Sum_probs=124.4
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..|.+.+...-.. .++.+.+..+.. ++.|+. ++|+.+++|++++|+++++ .....++.+|
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~---------~lH~~~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMK---------YLSDMGYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCEeehhhchhcEEECCCCeEEeCCC
Confidence 467788888888877654221 112222233322 245555 8898899999999999999 4567889999
Q ss_pred cccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCC
Q 026720 126 GMVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSP 200 (234)
Q Consensus 126 ~~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~ 200 (234)
|.+..+..... ......+..|++||.+.+ ..++...|+||+|++++++++ |..||.+....+....+.+....|
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~ 229 (267)
T cd05066 151 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLP 229 (267)
T ss_pred CcccccccccceeeecCCCccceeecCHhHhcc-CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCC
Confidence 98876543211 011112346899999864 347889999999999999886 999998877666665565554445
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.....+..+..+...|+...+.+|+++.+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 230 APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 55666778899999999999999999998864
No 293
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.48 E-value=1.6e-13 Score=111.69 Aligned_cols=137 Identities=31% Similarity=0.548 Sum_probs=103.8
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC-----CCCcccCcccccccccccccCCCCcchHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP-----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAI 170 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~ 170 (234)
++|..+++|++++|.|+++ .....++.+||.+..+..... .....++..|.+||...+...++...|+||+|++
T Consensus 120 ~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~ 199 (332)
T cd07857 120 YIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI 199 (332)
T ss_pred HHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH
Confidence 8899999999999999999 456789999998886543211 1234567789999987654557889999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC------------------------------CcchhhhhhhhccccC
Q 026720 171 MFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS------------------------------WPLGIQLASNLNWKLP 220 (234)
Q Consensus 171 l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~ 220 (234)
+++++.|++||.+....+.+.++....+.|+... .+..+..+...+....
T Consensus 200 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 279 (332)
T cd07857 200 LAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFD 279 (332)
T ss_pred HHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCC
Confidence 9999999999998877777776666555443211 1234555666677888
Q ss_pred CCCCccccccCCC
Q 026720 221 QMGGVNLLAVMPS 233 (234)
Q Consensus 221 ~~~~~~~~~~~~~ 233 (234)
+.+|+++.+++.+
T Consensus 280 P~~R~t~~~ll~~ 292 (332)
T cd07857 280 PTKRISVEEALEH 292 (332)
T ss_pred cccCCCHHHHhcC
Confidence 9999999988753
No 294
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.48 E-value=9.9e-14 Score=110.46 Aligned_cols=175 Identities=22% Similarity=0.319 Sum_probs=122.5
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
-.++..|+..+.+.+...-.. .++......+.. ++.|+. ++|..++.|++++|.++.+. ....++.++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~---------~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~ 160 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLE---------YLHSQNVIHRDIKSDNILLSKDGSVKLADF 160 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHH---------HHHhCCeeeCCCChhhEEEcCCCCEEECcc
Confidence 346667788788877655432 222222233322 255666 88989999999999999994 567889999
Q ss_pred cccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC--CCC
Q 026720 126 GMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS--PTK 202 (234)
Q Consensus 126 ~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~--~~~ 202 (234)
+.+....... ......++..|.+||.+.+. .++...|+||+|++++++++|..||.+.........+...... ++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 239 (286)
T cd06614 161 GFAAQLTKEKSKRNSVVGTPYWMAPEVIKRK-DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP 239 (286)
T ss_pred chhhhhccchhhhccccCCcccCCHhHhcCC-CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcch
Confidence 8766543321 11223456679999987643 4788999999999999999999999877665555444432222 222
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..++..+..+...|+...+..|+++.+++..
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 3377888889999999999999999998763
No 295
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.48 E-value=1.2e-13 Score=110.62 Aligned_cols=172 Identities=21% Similarity=0.325 Sum_probs=118.1
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccH-HHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSW-TIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~-~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
++..|+..|.+.+...- ..++...+... ..++.++. ++|+.++.|++++|+|+++ .....++.+|+.+
T Consensus 93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~---------~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~ 162 (296)
T cd06655 93 VVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALE---------FLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFC 162 (296)
T ss_pred EEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEECCCCCEEEccCccc
Confidence 55567777777664321 01111122222 12344555 7888899999999999999 4677899999987
Q ss_pred ccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC--CCCCCC
Q 026720 129 KEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS--PTKDSW 205 (234)
Q Consensus 129 ~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~--~~~~~~ 205 (234)
........ .....++..|++||.+.. ..++...|+||+|++++++++|+.||.+.........+...... ..+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T cd06655 163 AQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKL 241 (296)
T ss_pred hhcccccccCCCcCCCccccCcchhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccC
Confidence 76543211 122356678999998863 34678899999999999999999999988766655544332111 122344
Q ss_pred cchhhhhhhhccccCCCCCccccccCCC
Q 026720 206 PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+..+..++..|+..++.+|+++++++.+
T Consensus 242 ~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 242 SPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred CHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 5677788888999999999999998753
No 296
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.48 E-value=6.2e-14 Score=111.14 Aligned_cols=170 Identities=22% Similarity=0.281 Sum_probs=117.8
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
++|..|+..|.+.+...-.. .+++..+..|... +.++. ++|..+++|++++|+++++ .....++.+|
T Consensus 69 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~---------~lH~~~i~H~di~p~Nil~~~~~~~~l~df 139 (277)
T cd05577 69 CLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLE---------HLHQRRIVYRDLKPENVLLDDHGNVRISDL 139 (277)
T ss_pred EEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCCCHHHEEECCCCCEEEccC
Confidence 47777888888876543322 2333344444433 66666 8899999999999999999 4567899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhhCCCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSA---DQIYKICQLIGSPTK 202 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~---~~~~~i~~~~~~~~~ 202 (234)
+.+.............++..|.+||...+.. ++...|+||+|++++++++|+.||.+.... ..+.+.........+
T Consensus 140 g~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (277)
T cd05577 140 GLAVELKGGKKIKGRAGTPGYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYP 218 (277)
T ss_pred cchhhhccCCccccccCCCCcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCC
Confidence 9887654322233345567799999986544 788899999999999999999999876542 222221111122223
Q ss_pred CCCcchhhhhhhhccccCCCCCccccc
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLA 229 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (234)
..++..+..+...++..++.+|+++++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCc
Confidence 345667788888888889999996655
No 297
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.48 E-value=6.4e-14 Score=115.21 Aligned_cols=136 Identities=23% Similarity=0.355 Sum_probs=94.0
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|.|+++ .....++.+||.+..........+..++..|++||++.+ ..|+..+|+||+|+++||++
T Consensus 172 ~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 172 YLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLAR-DKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred HHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCC-CCCCchhhHHHHHHHHHHHH
Confidence 8899999999999999999 456789999998875433323344567888999999874 44789999999999999999
Q ss_pred hCC-CCCCCCCh---------HHHHHHHHHhhCCCCCC---------------------------------CCcchhhhh
Q 026720 176 SFG-ILFPGKSS---------ADQIYKICQLIGSPTKD---------------------------------SWPLGIQLA 212 (234)
Q Consensus 176 ~~~-~~f~~~~~---------~~~~~~i~~~~~~~~~~---------------------------------~~~~~~~~~ 212 (234)
++. ++|.+... ...+.++....+..+.. ..+.....+
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFL 330 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHH
Confidence 865 44443211 22333333333221111 111122235
Q ss_pred hhhccccCCCCCccccccCCC
Q 026720 213 SNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+..++..++.+|++..+++++
T Consensus 331 i~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 331 VHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHcCCcccCcCHHHHhcC
Confidence 667888899999999999864
No 298
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.48 E-value=8.3e-14 Score=110.65 Aligned_cols=137 Identities=33% Similarity=0.586 Sum_probs=105.7
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|..++.|++++|.++++ .....++.+++.+........ .....++..|++||.+.+...++...|+||+|++++++
T Consensus 115 ~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l 194 (284)
T cd07836 115 FCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEM 194 (284)
T ss_pred HHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence 7888899999999999999 456789999998875533211 12234567799999886555578899999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHhhCCCCCCCC----------------------------cchhhhhhhhccccCCCCCcc
Q 026720 175 LSFGILFPGKSSADQIYKICQLIGSPTKDSW----------------------------PLGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~ 226 (234)
++|+.||.+....+...++.+....|....| +..+..+...++..++.+|++
T Consensus 195 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 274 (284)
T cd07836 195 ITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS 274 (284)
T ss_pred HhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC
Confidence 9999999998888888777776665554333 233445666788888999999
Q ss_pred ccccCCC
Q 026720 227 LLAVMPS 233 (234)
Q Consensus 227 ~~~~~~~ 233 (234)
+.++++.
T Consensus 275 ~~~~l~~ 281 (284)
T cd07836 275 AHDALQH 281 (284)
T ss_pred HHHHhcC
Confidence 9998864
No 299
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.48 E-value=5.9e-14 Score=109.53 Aligned_cols=174 Identities=22% Similarity=0.316 Sum_probs=119.9
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|...+.+.+..+-. ..+....+..+... +.++. ++|..+++|++++|+++++ .....++.+++
T Consensus 68 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~---------~lH~~~i~h~di~p~nili~~~~~~~l~d~g 138 (251)
T cd05041 68 YIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGME---------YLESKNCIHRDLAARNCLVGENNVLKISDFG 138 (251)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHhCCEehhhcCcceEEEcCCCcEEEeecc
Confidence 4566677777666543221 11222233333332 45555 7888889999999999999 45678999999
Q ss_pred ccccccCCCCC-C--CcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 127 MVKEIDSNLPC-T--DYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 127 ~a~~~~~~~~~-~--~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
.+......... . .......|.+||.+.+. .++...|+||+|++++++++ +..||.+.........+......+.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~ 217 (251)
T cd05041 139 MSREEEGGIYTVSDGLKQIPIKWTAPEALNYG-RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAP 217 (251)
T ss_pred ccccccCCcceeccccCcceeccCChHhhccC-CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCC
Confidence 88765432111 1 11123358999988643 47889999999999999998 88999887766655555444444445
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+..++.+...|+...+.+|+++++++..
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 5667788889999999999999999998753
No 300
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.48 E-value=2.9e-13 Score=107.63 Aligned_cols=135 Identities=20% Similarity=0.316 Sum_probs=102.7
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|+++++ .....++.|||.+..+..... ......+..|.+||...+. .++...|+||+|++++
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~ 217 (283)
T cd05090 139 YLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG-KFSSDSDIWSFGVVLW 217 (283)
T ss_pred HHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccC-CCCchhhhHHHHHHHH
Confidence 7898899999999999999 456689999999887643221 1122334569999988643 3788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||.+....+....+-.....+.+...+..+..+...|+...+..||++.++.+
T Consensus 218 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 278 (283)
T cd05090 218 EIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHT 278 (283)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 9998 88999877655554444433333444556778888899999999999999998754
No 301
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.47 E-value=1.5e-13 Score=108.25 Aligned_cols=174 Identities=21% Similarity=0.299 Sum_probs=119.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhc-cCccccHHHH-------HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CC-
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMR-EKNLQSWTIM-------ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KG- 118 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~-~~~~~~~~~~-------i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~- 118 (234)
..++..|+..|.+.+...--..-. .....++... +.|+. ++|..+++|++++|.++++. ..
T Consensus 74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~i~H~dl~p~nil~~~~~~ 144 (269)
T cd05044 74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV---------YLEQMHFIHRDLAARNCLVSEKGY 144 (269)
T ss_pred eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH---------HHHhCCcccCCCChheEEEecCCC
Confidence 356667777787776543211100 1122333333 34444 78888899999999999984 33
Q ss_pred ----eeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 026720 119 ----VIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQI 190 (234)
Q Consensus 119 ----~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~ 190 (234)
..++.+|+.+..+..... ......+..|.+||.+.. ..++...|+||+|++++++++ |..||+.....+..
T Consensus 145 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~ 223 (269)
T cd05044 145 DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVL 223 (269)
T ss_pred CCCcceEECCcccccccccccccccCcccCCCccccCHHHHcc-CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHH
Confidence 678999998876533211 111233457899998864 347889999999999999998 99999987777666
Q ss_pred HHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 191 YKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 191 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..+............++.+..++..|+...+.+|+++.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 224 QHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 555433333334455677888899999999999999998764
No 302
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.47 E-value=1e-13 Score=109.02 Aligned_cols=173 Identities=23% Similarity=0.397 Sum_probs=119.0
Q ss_pred HHHHHHhhcCChHHHHHHHHh----hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.++..|+..|.+.+...-... ++...+..|... +.|+. ++|..++.|++++|+++.+ .....++.
T Consensus 78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~i~h~dl~p~nil~~~~~~~~l~ 148 (267)
T cd08224 78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE---------HMHSKRIMHRDIKPANVFITATGVVKLG 148 (267)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHH---------HHHhCCEecCCcChhhEEECCCCcEEEe
Confidence 466778888888776443211 122233444443 66666 8899899999999999999 45677899
Q ss_pred eccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-hHHHHH-HHHHhhCCC
Q 026720 124 DLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS-SADQIY-KICQLIGSP 200 (234)
Q Consensus 124 ~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~-~~~~~~-~i~~~~~~~ 200 (234)
+++.+..+.... ......++..|.+||...+ ..++...|+||+|++++++++|..||.+.. +..... .+......+
T Consensus 149 d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 227 (267)
T cd08224 149 DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPP 227 (267)
T ss_pred ccceeeeccCCCcccceecCCccccCHHHhcc-CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCC
Confidence 999877654321 1223456677999998863 447889999999999999999999996543 222222 222222222
Q ss_pred CCC-CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 201 TKD-SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 201 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+. ..+..+..++..|+...+.+|+++.+|++
T Consensus 228 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 228 LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 222 56667888889999999999999998764
No 303
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.47 E-value=4.2e-13 Score=107.30 Aligned_cols=137 Identities=34% Similarity=0.626 Sum_probs=105.1
Q ss_pred HhhhcccccCCcCCCcEEee--CCeeeEeeccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|.++++. ....++.+||.+........ .....++..|++||.+.+...++...|+||+|+++++
T Consensus 117 ~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~ 196 (294)
T PLN00009 117 YCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAE 196 (294)
T ss_pred HHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 88989999999999999995 34578999998876543221 1233456789999988655557889999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc----------------------------chhhhhhhhccccCCCCCc
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIGSPTKDSWP----------------------------LGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~ 225 (234)
+++|.+||.+....+...++++..+.|....|+ .....+...+....+.+|+
T Consensus 197 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 276 (294)
T PLN00009 197 MVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI 276 (294)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc
Confidence 999999999888888888888777766555443 2233455567777889999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
+.++++++
T Consensus 277 s~~~~l~~ 284 (294)
T PLN00009 277 TARAALEH 284 (294)
T ss_pred CHHHHhcC
Confidence 99988764
No 304
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.47 E-value=1.3e-13 Score=110.10 Aligned_cols=137 Identities=32% Similarity=0.517 Sum_probs=98.3
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++|..+++|++++|.|+++ .....+++|||.+....... ......++..|++||...+...++...|+||+|++++++
T Consensus 118 ~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l 197 (291)
T cd07870 118 YIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEM 197 (291)
T ss_pred HHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHH
Confidence 7898899999999999999 46678999999887543221 122334567899999986544577889999999999999
Q ss_pred HhCCCCCCCCCh-HHHHHHHHHhhCCCCCCC-------------------------------CcchhhhhhhhccccCCC
Q 026720 175 LSFGILFPGKSS-ADQIYKICQLIGSPTKDS-------------------------------WPLGIQLASNLNWKLPQM 222 (234)
Q Consensus 175 ~~~~~~f~~~~~-~~~~~~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~ 222 (234)
++|..||.+... .+.+.++....+.|.... .+..+..+...+...++.
T Consensus 198 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~ 277 (291)
T cd07870 198 LQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPK 277 (291)
T ss_pred HhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcc
Confidence 999999986543 334444444333322111 123445566667788999
Q ss_pred CCccccccCCC
Q 026720 223 GGVNLLAVMPS 233 (234)
Q Consensus 223 ~~~~~~~~~~~ 233 (234)
.|+++.+++.+
T Consensus 278 ~R~t~~~~l~h 288 (291)
T cd07870 278 DRISAQDALLH 288 (291)
T ss_pred cCcCHHHHhcC
Confidence 99999988764
No 305
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.47 E-value=1e-13 Score=111.42 Aligned_cols=137 Identities=31% Similarity=0.534 Sum_probs=99.9
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC-----CCCcccCcccccccccccccCCCCcchHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP-----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAI 170 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~ 170 (234)
++|..+++|++++|.++++ .....++.++|.+........ .....++..|++||.+.+...++..+|+||+|++
T Consensus 134 ~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~ 213 (310)
T cd07865 134 YIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI 213 (310)
T ss_pred HHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHH
Confidence 8898899999999999999 456789999998876543211 1223456679999988765557789999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC-------------------------------cchhhhhhhhcccc
Q 026720 171 MFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW-------------------------------PLGIQLASNLNWKL 219 (234)
Q Consensus 171 l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~ 219 (234)
++++++|.+||.+......+..+.+..+..+...| +..+..++..++..
T Consensus 214 l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~ 293 (310)
T cd07865 214 MAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVL 293 (310)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcC
Confidence 99999999999887665554444443332222111 12233567778888
Q ss_pred CCCCCccccccCCC
Q 026720 220 PQMGGVNLLAVMPS 233 (234)
Q Consensus 220 ~~~~~~~~~~~~~~ 233 (234)
.+.+|+++++++.+
T Consensus 294 ~P~~R~t~~e~l~h 307 (310)
T cd07865 294 DPAKRIDADTALNH 307 (310)
T ss_pred ChhhccCHHHHhcC
Confidence 99999999998864
No 306
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.47 E-value=9.7e-14 Score=112.75 Aligned_cols=176 Identities=15% Similarity=0.161 Sum_probs=113.9
Q ss_pred HHHHHHHhhcCChHHHHHHH--HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~--~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~ 124 (234)
..+|..|+..|.+.+...-. ..++...+..+... +.|+. ++|..+++|++++|+|+++. ....++.+
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~---------~LH~~~iiH~dlkp~Nil~~~~~~~~l~~ 144 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALD---------YIHHMGYVHRSVKASHILISVDGKVYLSG 144 (327)
T ss_pred EEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHH---------HHHHCCEecCCCChhhEEEecCCcEEEcc
Confidence 35677888888888765321 11333333333333 56666 88999999999999999984 44556666
Q ss_pred ccccccccCCC--------CCCCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 026720 125 LGMVKEIDSNL--------PCTDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 125 ~~~a~~~~~~~--------~~~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~ 195 (234)
++......... ......++..|++||++... ..|+..+|+||+|++++|+++|+.||.+............
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 224 (327)
T cd08227 145 LRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN 224 (327)
T ss_pred cchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc
Confidence 65433221100 00112345568999998643 3478999999999999999999999987665444333221
Q ss_pred hhCC---------------------------------------------CCCCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 196 LIGS---------------------------------------------PTKDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 196 ~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
.... +....++..+..+...|+..++.+|++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~el 304 (327)
T cd08227 225 GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTL 304 (327)
T ss_pred CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHH
Confidence 1100 0011223456678888999999999999999
Q ss_pred CCC
Q 026720 231 MPS 233 (234)
Q Consensus 231 ~~~ 233 (234)
+++
T Consensus 305 l~~ 307 (327)
T cd08227 305 LNH 307 (327)
T ss_pred hcC
Confidence 764
No 307
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.47 E-value=1e-13 Score=108.19 Aligned_cols=174 Identities=22% Similarity=0.430 Sum_probs=124.3
Q ss_pred HHHHHHhhcCChHHHHHHHH----hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFN----LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~----~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~ 123 (234)
.++..|+..+.+.+-.+-.. ..+...+..+.. ++.|+. ++|..++.|++++|+++++. ....++.
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~---------~lh~~~~~H~dl~~~nil~~~~~~~~l~ 145 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALK---------YLHSRKILHRDIKPQNIFLTSNGLVKLG 145 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHH---------HHHhCCEecccCChHHeEEcCCCcEEEC
Confidence 45666777777766443321 111112223322 355666 88988999999999999994 5678899
Q ss_pred eccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC
Q 026720 124 DLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK 202 (234)
Q Consensus 124 ~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 202 (234)
+++.+....... ......+++.|.+||.... ..++...|+||+|++++++++|..||.............+....+.+
T Consensus 146 d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (258)
T cd08215 146 DFGISKVLSSTVDLAKTVVGTPYYLSPELCQN-KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIP 224 (258)
T ss_pred CccceeecccCcceecceeeeecccChhHhcc-CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCC
Confidence 999887654432 1223456677999998763 34788999999999999999999999877765555555444344445
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+++.+..+.+.++...+.+|+++.+++..
T Consensus 225 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 5677888889999999999999999999864
No 308
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.47 E-value=1.8e-13 Score=108.88 Aligned_cols=173 Identities=20% Similarity=0.312 Sum_probs=115.7
Q ss_pred HHHHHhhcCChHHHHHHH---HhhccCccccHHHH-HHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEee
Q 026720 51 LVEMYSKCGHVEKAFKVF---NLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~---~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
++..|+..+.+....+.- ..+++..+..+... +.++. ++|. .+++|++++|.++++ .....++++
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~LH~~~~i~H~dl~p~nil~~~~~~~~l~d 146 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLK---------FLKEEHNIIHRDVKPTNVLVNGNGQVKLCD 146 (286)
T ss_pred EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHH---------HHHhcCCEeeCCCCHHHEEECCCCCEEEee
Confidence 566788888886654321 01222222223222 44555 7775 379999999999999 456789999
Q ss_pred ccccccccCCCCCCCcccCccccccccccccc-----CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC-
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSE-----IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG- 198 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~-----~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~- 198 (234)
||.+..+.... .....+++.|.+||.+.+.. .++...|+||+|++++++++|+.||+..........+.....
T Consensus 147 fg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 225 (286)
T cd06622 147 FGVSGNLVASL-AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG 225 (286)
T ss_pred cCCcccccCCc-cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhc
Confidence 99887764432 22335667899999875322 257789999999999999999999986544333322222111
Q ss_pred C--CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 S--PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. ..+..+++.+..+...++...+.+|++++++++.
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 226 DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1 2223456677778888899999999999998864
No 309
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.47 E-value=1.2e-13 Score=109.77 Aligned_cols=173 Identities=20% Similarity=0.340 Sum_probs=117.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+...- ..++...+..+... +.|+. ++|..+++|++++|.|+++ .....++.+||
T Consensus 83 ~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~---------~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMA---------YLHSQHYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred EEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHH---------HHHHCCeeccccChheEEEcCCCcEEEeecc
Confidence 3477788888888765432 12333333344333 55555 8898899999999999999 45678999999
Q ss_pred ccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCh--------------HH
Q 026720 127 MVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSS--------------AD 188 (234)
Q Consensus 127 ~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~--------------~~ 188 (234)
.+........ .....++..|.+||.... ..++...|+||+|++++|+++|..|+..... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05080 153 LAKAVPEGHEYYRVREDGDSPVFWYAVECLKE-NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVV 231 (283)
T ss_pred cccccCCcchhhccCCCCCCCceeeCHhHhcc-cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchh
Confidence 8876643211 111223445889998763 3468899999999999999999988764321 11
Q ss_pred HHHHHH-HhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 189 QIYKIC-QLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 189 ~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+.... .....+.+...+..+..+...|+...+.+||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 232 RLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 111111 12222334556778888999999999999999998864
No 310
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=3.9e-14 Score=119.99 Aligned_cols=164 Identities=23% Similarity=0.357 Sum_probs=119.8
Q ss_pred cCChHHHHH-HHHhhcc--CccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee--CCeeeEeeccccccc
Q 026720 58 CGHVEKAFK-VFNLMRE--KNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEI 131 (234)
Q Consensus 58 ~g~~~~a~~-~~~~m~~--~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~a~~~ 131 (234)
.|++....+ .+.-|.+ ...-.|+.+ +.|+. ++|...++|++++-||++++ +++++++|||.++.+
T Consensus 656 GGSLSsLLrskWGPlKDNEstm~fYtkQILeGLk---------YLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRL 726 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLK---------YLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRL 726 (1226)
T ss_pred CCcHHHHHHhccCCCccchhHHHHHHHHHHHHhh---------hhhhcceeeccccCCcEEEeeccceEEecccccchhh
Confidence 455555433 2334432 234456766 78888 99988899999999999995 689999999999987
Q ss_pred cCCCC-CCCcccCccccccccccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH----hhCCCCCCCC
Q 026720 132 DSNLP-CTDYVTTRWYRGPEVLLFSE-IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ----LIGSPTKDSW 205 (234)
Q Consensus 132 ~~~~~-~~~~~~~~~~~~pe~~~~~~-~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~----~~~~~~~~~~ 205 (234)
-.--+ ..++.++-.|+|||++.-++ .|....||||+||.+.||.+|++||-..++...+ +|+ +...|.+..-
T Consensus 727 AginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA--MFkVGmyKvHP~iPeel 804 (1226)
T KOG4279|consen 727 AGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA--MFKVGMYKVHPPIPEEL 804 (1226)
T ss_pred ccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh--hhhhcceecCCCCcHHH
Confidence 65433 34678888999999985443 5999999999999999999999999988877765 333 2233444554
Q ss_pred cchhhhhhhhccccCCCCCccccccCC
Q 026720 206 PLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+..-+.++..|-.-++.+|++..+++.
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 545555566666667777777776664
No 311
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.47 E-value=8.3e-14 Score=110.57 Aligned_cols=169 Identities=21% Similarity=0.308 Sum_probs=118.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+..- ..++++.+..+... +.|+. ++|+.+++|++++|+|+++ .....++.+||.
T Consensus 75 ~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~ 141 (279)
T cd06619 75 SICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLT---------YLWSLKILHRDVKPSNMLVNTRGQVKLCDFGV 141 (279)
T ss_pred EEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHH---------HHHHCCEeeCCCCHHHEEECCCCCEEEeeCCc
Confidence 467778888877542 23444444444443 56666 8899999999999999999 467889999999
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHhhCCC----
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSAD---QIYKICQLIGSP---- 200 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~---~~~~i~~~~~~~---- 200 (234)
+..+... ......++..|.+||...+. .++...|+||+|++++++++|+.||....... ......+....+
T Consensus 142 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (279)
T cd06619 142 STQLVNS-IAKTYVGTNAYMAPERISGE-QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV 219 (279)
T ss_pred ceecccc-cccCCCCChhhcCceeecCC-CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC
Confidence 8876442 23345677889999998743 47889999999999999999999997532211 111222222211
Q ss_pred -CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 -TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
....++..+..++..++..++.+|+++++++..
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 123355667778888999999999999998764
No 312
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.47 E-value=1.9e-13 Score=110.53 Aligned_cols=134 Identities=21% Similarity=0.356 Sum_probs=104.6
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCccccccccccc--ccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|+++.+ .....++.+++.+..... .....++..|.+||.+.. ...++...|+||+|+++++
T Consensus 140 ~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~e 216 (317)
T cd06635 140 YLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 216 (317)
T ss_pred HHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHH
Confidence 8898899999999999999 456789999997765432 223456678999998742 2346788999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhC-CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIG-SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++|..||.+.........+..... ......|+..+..+...|+...+.+|+++.+++..
T Consensus 217 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 217 LAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred HHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 9999999988766666655544332 23345677788889999999999999999998864
No 313
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.47 E-value=2.3e-13 Score=106.86 Aligned_cols=175 Identities=21% Similarity=0.330 Sum_probs=117.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...--..+....+..+. .++.|+. ++|+.++.|++++|+++++ .....++.+++.
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~---------~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~ 145 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLA---------YLHSHGIVHRDIKPANIFLDHNGVIKLGDFGC 145 (264)
T ss_pred EEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEECCCCCEEEccccc
Confidence 4566677778887754321112222223332 3366666 8899899999999999999 456789999998
Q ss_pred cccccCCCCC-----CCcccCccccccccccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhhC-
Q 026720 128 VKEIDSNLPC-----TDYVTTRWYRGPEVLLFSE--IYGPEVDKWAMGAIMFEMLSFGILFPGKS-SADQIYKICQLIG- 198 (234)
Q Consensus 128 a~~~~~~~~~-----~~~~~~~~~~~pe~~~~~~--~~~~~~d~~s~g~~l~e~~~~~~~f~~~~-~~~~~~~i~~~~~- 198 (234)
+......... ....++..|.+||.+.+.. .++...|+||+|++++++++|..||.+.. .+.....+.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 225 (264)
T cd06626 146 AVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKP 225 (264)
T ss_pred ccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCC
Confidence 8776443221 1234567899999986433 26788999999999999999999997653 3333333322111
Q ss_pred -CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 -SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.|+....+..+..+...|+..++.+|+++++++.+
T Consensus 226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 226 PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11112225567778888999999999999998764
No 314
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.47 E-value=1.3e-13 Score=109.80 Aligned_cols=135 Identities=24% Similarity=0.369 Sum_probs=100.0
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.++++ .....++.+||.+..+..... ......+..|.+||...+ ..++...|+||+|++++
T Consensus 145 ~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~ 223 (288)
T cd05050 145 YLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLW 223 (288)
T ss_pred HHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHH
Confidence 7888899999999999998 466789999998876543211 111233456899998764 44788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
++++ +..||.+....+....+...-..+.+...+..+..++..|+..++.+|+++.+++.
T Consensus 224 el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 224 EIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9997 77888877766655444332222223344567778888899999999999998864
No 315
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.46 E-value=1.2e-13 Score=111.62 Aligned_cols=174 Identities=22% Similarity=0.281 Sum_probs=120.9
Q ss_pred HHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
.+|..|+..|.+.+...-.. ..++..+..|... +.|+. ++|..+++|++++|+|+++ .+...++.++
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dlkp~Nili~~~~~~~l~df 147 (316)
T cd05574 77 CLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALE---------YLHLLGIVYRDLKPENILLHESGHIMLSDF 147 (316)
T ss_pred EEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHH---------HHHHCCeeccCCChHHeEEcCCCCEEEeec
Confidence 56777888888877543210 1111122223222 55555 7898899999999999999 4567889999
Q ss_pred cccccccCCC------------------------------CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 126 GMVKEIDSNL------------------------------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 126 ~~a~~~~~~~------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
+.+....... ......++..|++||...+. .++...|+||+|+++++++
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Di~slG~ll~~l~ 226 (316)
T cd05574 148 DLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD-GHGSAVDWWTLGILLYEML 226 (316)
T ss_pred chhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC-CCCchHHHHHHHHHHHHHh
Confidence 8776542211 11123566779999998744 3678999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhC-CCCCCCCcchhhhhhhhccccCCCCCcc----ccccCCC
Q 026720 176 SFGILFPGKSSADQIYKICQLIG-SPTKDSWPLGIQLASNLNWKLPQMGGVN----LLAVMPS 233 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 233 (234)
+|+.||.+........++..... .+.....+..+..+.+.++...+..|++ .++++..
T Consensus 227 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 227 YGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred hCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 99999998877766666554222 2222335677888889999999999999 7777653
No 316
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.46 E-value=3.8e-13 Score=109.98 Aligned_cols=135 Identities=36% Similarity=0.527 Sum_probs=102.5
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|.++++ .....++.+||.+...... .....++..|++||.+.....++...|+||+|++++|++
T Consensus 132 ~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 132 YIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred HHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC--CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHH
Confidence 7888889999999999999 4677899999988765432 233456778999999865445788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCC------------------------------CCCcchhhhhhhhccccCCCCCc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTK------------------------------DSWPLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 225 (234)
+|+.||.+......+..+....+.+.+ ...+..+..++..++..++.+|+
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 289 (342)
T cd07879 210 TGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL 289 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc
Confidence 999999987766666555443332211 12234456777788899999999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
++++++.+
T Consensus 290 ~~~e~l~h 297 (342)
T cd07879 290 TATEALEH 297 (342)
T ss_pred CHHHHhcC
Confidence 99988753
No 317
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.46 E-value=2.2e-13 Score=113.48 Aligned_cols=134 Identities=20% Similarity=0.322 Sum_probs=100.7
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.|+++. ....+++|||.+........ .....++..|++||.+.+ ..++...|+||+|++++
T Consensus 252 ~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ 330 (400)
T cd05105 252 FLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDVWSYGILLW 330 (400)
T ss_pred HHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhHHHHHHHHH
Confidence 78888899999999999994 56789999999876543211 112234566999998864 34788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhh-CCCCCCCCcchhhhhhhhccccCCCCCccccccC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLI-GSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
|+++ |..||++....+......... ..+.+..++..+..++..|+...+.+||++.++.
T Consensus 331 ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~ 391 (400)
T cd05105 331 EIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLS 391 (400)
T ss_pred HHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHH
Confidence 9997 889998765544444433322 2333456677888889999999999999988764
No 318
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.46 E-value=2.5e-13 Score=108.17 Aligned_cols=137 Identities=23% Similarity=0.324 Sum_probs=99.5
Q ss_pred Hhhhc-ccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccc--cCCCCcchHHHHHHHHH
Q 026720 97 SLHRQ-GYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFS--EIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~-~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~~d~~s~g~~l~ 172 (234)
++|.. +++|++++|.++++ .....++.+||.+..+..........++..|.+||.+... ..++...|+||+|++++
T Consensus 122 ~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 201 (288)
T cd06616 122 YLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLY 201 (288)
T ss_pred HHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHH
Confidence 66654 79999999999999 4567899999998776544333344567789999998644 35788999999999999
Q ss_pred HHHhCCCCCCCCChH-HHHHHHHHhh-CC---CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 173 EMLSFGILFPGKSSA-DQIYKICQLI-GS---PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 173 e~~~~~~~f~~~~~~-~~~~~i~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
++++|+.||+..... +...++.... .. ......+..+..++..|+..++.+|+++++++.+
T Consensus 202 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 202 EVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 999999999865421 2222222110 01 1112355667788888999999999999998764
No 319
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.46 E-value=1.8e-13 Score=110.46 Aligned_cols=134 Identities=21% Similarity=0.371 Sum_probs=104.2
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCccccccccccc--ccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|+++++ .....++.+++.+..... .....++..|.+||.+.. ...++...|+||+|+++++
T Consensus 136 ~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~e 212 (313)
T cd06633 136 YLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 212 (313)
T ss_pred HHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHH
Confidence 8898999999999999999 456789999998765332 233456778999998742 2347788999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhC-CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIG-SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++|..||.+........++..... ......|+..+..+...++...+.+|+++++++..
T Consensus 213 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 213 LAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 9999999998877676666544322 12224567778889999999999999999998864
No 320
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.46 E-value=2.2e-13 Score=107.56 Aligned_cols=174 Identities=17% Similarity=0.242 Sum_probs=116.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHh-hccC---ccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeE
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL-MREK---NLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKI 122 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~-m~~~---~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~ 122 (234)
..++..|+..|++.+...-... .... .+..+.. ++.|+. ++|+.+++|++++|.++++ .....++
T Consensus 70 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~---------~lH~~~i~H~dikp~nil~~~~~~~~l 140 (268)
T cd05086 70 YLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVT---------HMHKHNFLHSDLALRNCFLTSDLTVKV 140 (268)
T ss_pred cEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHH---------HHHHCCeeccCCccceEEEcCCccEEe
Confidence 4678889998888776542111 0111 1112222 245555 7898899999999999999 4567899
Q ss_pred eeccccccccCCC---CCCCcccCcccccccccccc------cCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 026720 123 GDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFS------EIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYK 192 (234)
Q Consensus 123 ~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~------~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~ 192 (234)
.|||.+....... ......++..|++||+.... ..++...|+||+|++++|+++ +..||.+....+...+
T Consensus 141 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~ 220 (268)
T cd05086 141 GDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNH 220 (268)
T ss_pred cccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999876432211 11223456779999987321 124678999999999999996 5678887777666666
Q ss_pred HHHhhCC----CC-CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 193 ICQLIGS----PT-KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 193 i~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
+...... |. ...+++.+..+.++|| .++.+||+++++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 221 VIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 5543221 11 2346677778888899 55789999998864
No 321
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.46 E-value=1.2e-13 Score=110.27 Aligned_cols=174 Identities=30% Similarity=0.540 Sum_probs=113.7
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.+|..|+. +++.+...-.. .++...+..+.. ++.|+. ++|+.+++|++++|.++++ ..+..++.+||
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~---------~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg 148 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLA---------YCHQRRVLHRDLKPQNLLISERGELKLADFG 148 (291)
T ss_pred EEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCeecccCCHHHEEEcCCCCEEECccc
Confidence 46666766 45544322111 112222333332 355555 8899899999999999999 45678999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHhhCCCCCCC
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS-SADQIYKICQLIGSPTKDS 204 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~-~~~~~~~i~~~~~~~~~~~ 204 (234)
.+....... .......+..|.+||...+...++...|+||+|++++++++|..||++.. ..+.+..+.+.++.+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (291)
T cd07844 149 LARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEET 228 (291)
T ss_pred cccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhh
Confidence 876543211 11222346678999988655557889999999999999999999998776 5556656666666554444
Q ss_pred Cc-------------------------------chhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WP-------------------------------LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
|+ .....+...+....+..|+++.+++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 229 WPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 32 112233444556678888998888754
No 322
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.46 E-value=9.8e-14 Score=111.24 Aligned_cols=172 Identities=22% Similarity=0.361 Sum_probs=119.0
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccH-HHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSW-TIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~-~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.+...- ..++...+..+ ..++.++. ++|+.+++|++++|+|+++ .....++.|||.
T Consensus 92 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~---------~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~ 161 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALD---------FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF 161 (297)
T ss_pred EEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEECCCCCEEECcCcc
Confidence 567778888887775321 11222222222 22355565 8898899999999999999 466789999998
Q ss_pred cccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC---CC
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT---KD 203 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~---~~ 203 (234)
+........ .....+++.|.+||...+ ..++...|+||+|++++++++|..||.+......+..+.. .+.+. +.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (297)
T cd06656 162 CAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQNPE 239 (297)
T ss_pred ceEccCCccCcCcccCCccccCHHHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCCCCCcc
Confidence 876533221 223456678999998864 4467889999999999999999999987655444333322 12222 23
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..+..+...++..++.+|+++++++.+
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 445667778888998888999999998864
No 323
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.46 E-value=2.2e-13 Score=107.40 Aligned_cols=174 Identities=21% Similarity=0.336 Sum_probs=122.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHh----hccCccccHH-HHHHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeee
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL----MREKNLQSWT-IMISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIK 121 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~ 121 (234)
..++..|+..+.+.+...-... ++...+..+. .++.++. ++|. .++.|++++|.++++ .....+
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~~i~H~dl~~~nil~~~~~~~~ 154 (269)
T cd08528 84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR---------YLHKEKRIVHRDLTPNNIMLGEDDKVT 154 (269)
T ss_pred EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HhccCCceeecCCCHHHEEECCCCcEE
Confidence 4567777777777766533211 1111112221 2344555 7774 568999999999999 456789
Q ss_pred EeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC
Q 026720 122 IGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT 201 (234)
Q Consensus 122 ~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 201 (234)
+.+||.+.............++..|.+||...+ ..++...|+||+|+++|++++|+.||...........+.+....|.
T Consensus 155 l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 233 (269)
T cd08528 155 ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL 233 (269)
T ss_pred EecccceeecccccccccccCcccCcChhhhcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC
Confidence 999998876554322233456677999999874 3478899999999999999999999987766665555554443333
Q ss_pred CC-CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 KD-SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.. .++..+..++..|+..++..|+++.++..
T Consensus 234 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 234 PEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred CcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 33 56778888999999999999999988754
No 324
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.46 E-value=9.2e-14 Score=110.13 Aligned_cols=173 Identities=17% Similarity=0.256 Sum_probs=114.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+...- ..+.+..+..+.. ++.|+. ++|..+++|++++|+++.+ .....++.+|+.
T Consensus 78 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~---------~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~ 147 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLD---------YLHSERKIHRDIKAANVLLSEQGDVKLADFGV 147 (277)
T ss_pred EEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHH---------HHhcCCeeccCCChheEEEeCCCCEEEccccc
Confidence 456667777777654321 1111112222222 244444 7888889999999999999 456789999998
Q ss_pred cccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+..+.... ......++..|.+||...+. .++...|+||+|++++|+++|..||.+.........+............+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (277)
T cd06642 148 AGQLTDTQIKRNTFVGTPFWMAPEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYS 226 (277)
T ss_pred cccccCcchhhhcccCcccccCHHHhCcC-CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccC
Confidence 87654322 11223456779999998643 47889999999999999999999998665444443332211111122345
Q ss_pred chhhhhhhhccccCCCCCccccccCCC
Q 026720 207 LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..+...|+...+.+|+++.+++.+
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 567777888999999999999998753
No 325
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.46 E-value=2.6e-13 Score=107.75 Aligned_cols=137 Identities=21% Similarity=0.285 Sum_probs=101.8
Q ss_pred Hhhhc-ccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccc---cCCCCcchHHHHHHHH
Q 026720 97 SLHRQ-GYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFS---EIYGPEVDKWAMGAIM 171 (234)
Q Consensus 97 ~l~~~-~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~~d~~s~g~~l 171 (234)
++|+. +++|++++|.++++ .....++.+||.+.............++..|.+||.+.+. ..++...|+||+|+++
T Consensus 118 ~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 118 YLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred HHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 77875 79999999999999 4667899999998876543333334566779999987542 2367889999999999
Q ss_pred HHHHhCCCCCCCCC-hHHHHHHHHHhhCC-CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 172 FEMLSFGILFPGKS-SADQIYKICQLIGS-PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 172 ~e~~~~~~~f~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++++|+.||.+.. ..+....+...... .+...+++.+..++..++...+.+|+++++++..
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 198 IELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 99999999997533 33444444332221 2234567788888889999999999999998763
No 326
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.46 E-value=2e-13 Score=106.15 Aligned_cols=174 Identities=18% Similarity=0.303 Sum_probs=121.1
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~ 126 (234)
.++..|+..+.+.+..... ..++...+..+. .++.++. ++|..++.|++++|.++.+. ....++.+++
T Consensus 73 ~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~---------~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~ 143 (253)
T cd05122 73 WIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLE---------YLHSNGIIHRDIKAANILLTSDGEVKLIDFG 143 (253)
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHH---------HhhcCCEecCCCCHHHEEEccCCeEEEeecc
Confidence 4566677777776654332 112222222222 2355555 78888899999999999994 5678999999
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC--CCCCCC
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG--SPTKDS 204 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~--~~~~~~ 204 (234)
.+.............++..|.+||...+.. ++...|+||+|++++++++|+.||................. .+....
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (253)
T cd05122 144 LSAQLSDTKARNTMVGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEK 222 (253)
T ss_pred ccccccccccccceecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccc
Confidence 887765533223445667899999986443 67889999999999999999999987755554444333211 122333
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
|+..+..+...++..++.+|+++.+++.+
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 46778888889999999999999998764
No 327
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.45 E-value=1.3e-13 Score=111.15 Aligned_cols=137 Identities=34% Similarity=0.607 Sum_probs=99.8
Q ss_pred HhhhcccccCCcCCCcEEe-e----CCeeeEeeccccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-S----KGVIKIGDLGMVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAM 167 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~----~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~ 167 (234)
++|..+++|++++|+|+++ . ....++.|||.+..+..... .....++..|.+||...+...++..+|+||+
T Consensus 123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 202 (316)
T cd07842 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAI 202 (316)
T ss_pred HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHH
Confidence 8899999999999999999 4 57889999998886643221 2234556789999988765567889999999
Q ss_pred HHHHHHHHhCCCCCCCCChH---------HHHHHHHHhhCCCCCCCC---------------------------------
Q 026720 168 GAIMFEMLSFGILFPGKSSA---------DQIYKICQLIGSPTKDSW--------------------------------- 205 (234)
Q Consensus 168 g~~l~e~~~~~~~f~~~~~~---------~~~~~i~~~~~~~~~~~~--------------------------------- 205 (234)
|++++++++|.+||.+.... +.+.++++.++.++...|
T Consensus 203 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (316)
T cd07842 203 GCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKH 282 (316)
T ss_pred HHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhc
Confidence 99999999999999865432 244455555554433222
Q ss_pred ---cchhhhhhhhccccCCCCCccccccCCC
Q 026720 206 ---PLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 206 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.....+...+....+.+|+++++++.+
T Consensus 283 ~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 283 KKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred cCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 2233345555677788999999998764
No 328
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.45 E-value=1.7e-13 Score=107.93 Aligned_cols=172 Identities=21% Similarity=0.296 Sum_probs=112.0
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a 128 (234)
++..|+..|.+.+...-...+.......|... +.++. ++|+.+++|++++|.++++. ....++.|||.+
T Consensus 83 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~ 153 (265)
T cd06652 83 IFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVS---------YLHSNMIVHRDIKGANILRDSVGNVKLGDFGAS 153 (265)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhCCEecCCCCHHHEEecCCCCEEECcCccc
Confidence 56677777887765432222222222333332 44555 78888999999999999994 567899999988
Q ss_pred ccccCCC----CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC-CC
Q 026720 129 KEIDSNL----PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT-KD 203 (234)
Q Consensus 129 ~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~-~~ 203 (234)
..+.... ......++..|++||...+ ..++...|+||+|++++++++|+.||.+........++......+. +.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (265)
T cd06652 154 KRLQTICLSGTGMKSVTGTPYWMSPEVISG-EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPP 232 (265)
T ss_pred cccccccccccccccCCCCccccChhhhcC-CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCch
Confidence 7653211 1122346678999999864 3467889999999999999999999987655544433332211111 12
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..+..+...++. .+.+|+++++++..
T Consensus 233 ~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 233 HVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred hhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 223344455555554 67899999998864
No 329
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.45 E-value=5.3e-13 Score=109.14 Aligned_cols=135 Identities=35% Similarity=0.565 Sum_probs=104.5
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|+.+++|++++|.++++ .+...++.+||.+...... .....++..|.+||.......++...|+||+|+++++++
T Consensus 133 ~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 210 (343)
T cd07851 133 YIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred HHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHH
Confidence 8899899999999999999 4567899999998876543 234456778999998754345678999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCC------------------------------CCCcchhhhhhhhccccCCCCCc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTK------------------------------DSWPLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 225 (234)
+|..||++....+.+..+.+..+.++. ...+..+..+...++..++.+|+
T Consensus 211 tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp 290 (343)
T cd07851 211 TGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI 290 (343)
T ss_pred hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC
Confidence 999999988777776666555443321 12244555667778888999999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
++++++.+
T Consensus 291 t~~ell~h 298 (343)
T cd07851 291 TAAEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99998764
No 330
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.45 E-value=3.1e-13 Score=106.01 Aligned_cols=174 Identities=19% Similarity=0.405 Sum_probs=119.4
Q ss_pred HHHHHHhhcCChHHHHHHHHh----hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeCCeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSKGVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~~~~~~~~ 124 (234)
.++..|+..+.+.....-... +++.....|... +.|+. ++|+.++.|++++|+++.+.....++.+
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~i~h~~l~~~nili~~~~~~l~d 148 (260)
T cd08222 78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH---------YMHQRRILHRDLKAKNIFLKNNLLKIGD 148 (260)
T ss_pred EEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH---------HHHHcCccccCCChhheEeecCCEeecc
Confidence 456667777777665432111 111122223222 44444 7888899999999999999766789999
Q ss_pred ccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 125 LGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 125 ~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
++.+........ .....+++.|.+||...+ ..++...|+||+|+++++++++..||++........++.......-+.
T Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd08222 149 FGVSRLLMGSCDLATTFTGTPYYMSPEALKH-QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPE 227 (260)
T ss_pred cCceeecCCCcccccCCCCCcCccCHHHHcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcc
Confidence 998876544322 223446677999998753 346778999999999999999999998766655554443322222233
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.++..+..++..++...+..|+++++++.+
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 228 TYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred hhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 556677778888898899999999998864
No 331
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.45 E-value=2.8e-13 Score=108.00 Aligned_cols=175 Identities=19% Similarity=0.296 Sum_probs=120.9
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhcc----C------ccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMRE----K------NLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV- 115 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~----~------~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~- 115 (234)
...++..|+..|.+.+-.+-.....+ . ++..+... +.|+. ++|+.++.|++++|+|+++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lH~~~i~H~dikp~nili~ 153 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA---------YLNAKKFVHRDLAARNCMVA 153 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHH---------HHHhCCCcCCCCChheEEEc
Confidence 35788889999999887654322111 1 11122222 44555 7888899999999999999
Q ss_pred eCCeeeEeeccccccccCCCCC---CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 026720 116 SKGVIKIGDLGMVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIY 191 (234)
Q Consensus 116 ~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~ 191 (234)
.....++.+||.++.+...... .....+..|.+||...+ ..++...|+||+|++++|+++ +..||.+....+...
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~ 232 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 232 (288)
T ss_pred CCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 4567899999988765432111 11123456899998864 346889999999999999998 788998766655444
Q ss_pred HHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 192 KICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 192 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+......+.+...+..+..+...|+..++.+|+++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 273 (288)
T cd05061 233 FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273 (288)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 44433222333444567888889999999999999998864
No 332
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.45 E-value=3e-13 Score=113.40 Aligned_cols=169 Identities=24% Similarity=0.359 Sum_probs=122.3
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe--eCCeeeEee
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV--SKGVIKIGD 124 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~--~~~~~~~~~ 124 (234)
...+|..+.+.|.+-+.+..-.... .-..-|.+. +.++. ++|.++++|+|++|+|+++ +....++.+
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~---------~LH~~gvvhRDLkp~NIL~~~~~g~lrlty 459 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVD---------YLHEQGVVHRDLKPGNILLDGSAGHLRLTY 459 (612)
T ss_pred eeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHH---------HHHhcCeeecCCChhheeecCCCCcEEEEE
Confidence 3456666777666655543222221 222336555 66666 8999999999999999999 356789999
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC-C
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK-D 203 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~-~ 203 (234)
||.++++... +.+..-+..|.|||+.. ...|+...|+||+|++||+|++|..||....+. ..+...++.+.- +
T Consensus 460 FG~a~~~~~~--~~tp~~t~~y~APEvl~-~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s~ 533 (612)
T KOG0603|consen 460 FGFWSELERS--CDTPALTLQYVAPEVLA-IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFSE 533 (612)
T ss_pred echhhhCchh--hcccchhhcccChhhhc-cCCCCcchhhHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCcccc
Confidence 9999998775 22334456789999997 556999999999999999999999999866555 445555555432 3
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.-+..-..|.+.....++..|++..++.-
T Consensus 534 ~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 534 CVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 44456667778888889999999887753
No 333
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.45 E-value=3.9e-13 Score=107.17 Aligned_cols=173 Identities=22% Similarity=0.382 Sum_probs=119.8
Q ss_pred HHHHHHhhcCChHHHHHHHHh----hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL----MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.++..|+..|.+.+....... ++...+..+.. ++.++. ++|..++.|++++|+++++ .....++.
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~---------~lH~~~i~H~dl~~~nil~~~~~~~~l~ 147 (287)
T cd06621 77 GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLS---------YLHSRKIIHRDIKPSNILLTRKGQVKLC 147 (287)
T ss_pred EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccCCCCHHHEEEecCCeEEEe
Confidence 467778888888765332111 11112223333 366677 8899999999999999999 45678999
Q ss_pred eccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHhhC
Q 026720 124 DLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS-----SADQIYKICQLIG 198 (234)
Q Consensus 124 ~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~-----~~~~~~~i~~~~~ 198 (234)
+++.+........ ....++..|++||...+ ..++...|+||+|+++|++++|+.||.... ..+....+.....
T Consensus 148 dfg~~~~~~~~~~-~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd06621 148 DFGVSGELVNSLA-GTFTGTSFYMAPERIQG-KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN 225 (287)
T ss_pred ecccccccccccc-ccccCCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc
Confidence 9998876554322 22345677999998863 457889999999999999999999998662 2232222222111
Q ss_pred ----C--CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 ----S--PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
. +....|++.+..+...|+...+-+||++.+++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 226 PELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred hhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0 1113577788889999999999999999988764
No 334
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.45 E-value=2.3e-13 Score=108.95 Aligned_cols=181 Identities=19% Similarity=0.236 Sum_probs=117.2
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhc-----cCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeE
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMR-----EKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKI 122 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~-----~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~ 122 (234)
..++..|+..|++.+-..-...-. .....++..++....+.-...+ ++|+.+++|++++|+|+++ .....++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~--~lH~~~i~H~dlkp~Nili~~~~~~~l 171 (296)
T cd05095 94 LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMK--YLSSLNFVHRDLATRNCLVGKNYTIKI 171 (296)
T ss_pred cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHH--HHHHCCeecccCChheEEEcCCCCEEe
Confidence 357777888888866543211000 0112333333222221111111 7888899999999999999 4567899
Q ss_pred eeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHH--
Q 026720 123 GDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS--FGILFPGKSSADQIYKICQ-- 195 (234)
Q Consensus 123 ~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~--~~~~f~~~~~~~~~~~i~~-- 195 (234)
.+||.+..+..... ......+..|++||.... ..++...|+||+|+++||+++ +..||.+....+......+
T Consensus 172 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~ 250 (296)
T cd05095 172 ADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFF 250 (296)
T ss_pred ccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHH
Confidence 99998886643221 111223456889998754 347889999999999999998 6688876554444333221
Q ss_pred -h----hCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 196 -L----IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 196 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
. ...+.+..++..+..+...|+..++.+||++.++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 251 RDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred hhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1 112344566778889999999999999999998864
No 335
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.45 E-value=2.9e-13 Score=108.82 Aligned_cols=169 Identities=28% Similarity=0.349 Sum_probs=115.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|++.+..+-...+++..+..+.. ++.|+. ++|..+++|++++|.|+++ ..+..++.+||.
T Consensus 77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 77 CMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALE---------YLHNYGIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCccccCCchHHEEECCCCCEEEeeCCC
Confidence 57788888888877754332233222222222 245555 8898999999999999999 456788999997
Q ss_pred cccccCCC----------------CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 026720 128 VKEIDSNL----------------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIY 191 (234)
Q Consensus 128 a~~~~~~~----------------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~ 191 (234)
++.....+ ......++..|.+||.+.. ..++...|+||+|++++|+++|..||.+....+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 76311100 0011345667999998764 347889999999999999999999999876665555
Q ss_pred HHHHhhC-CCCC-CCCcchhhhhhhhccccCCCCCcccc
Q 026720 192 KICQLIG-SPTK-DSWPLGIQLASNLNWKLPQMGGVNLL 228 (234)
Q Consensus 192 ~i~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (234)
++..... .|.. ...+..+..+...++..++.+|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 265 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG 265 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCcc
Confidence 5544322 2222 24566678888889999999999854
No 336
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.44 E-value=2.3e-13 Score=106.39 Aligned_cols=174 Identities=22% Similarity=0.461 Sum_probs=119.1
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C-CeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K-GVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~-~~~~~~~ 124 (234)
.+|..|+..+.+.+...-... +++..+..|.. ++.++. ++|..++.|++++|.++++. . ...++++
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~i~H~dl~~~nil~~~~~~~~~l~d 145 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLK---------HIHDRKILHRDIKSQNIFLSKNGMVAKLGD 145 (257)
T ss_pred EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH---------HHHHCCcccccCCHHHEEEcCCCCeEEecc
Confidence 356667777777665432111 11112222222 244444 78888899999999999994 3 3468999
Q ss_pred ccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 125 LGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 125 ~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
++.+........ .....+++.|.+||..... .++...|+||+|++++++++|..||.+.........+......+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 224 (257)
T cd08225 146 FGIARQLNDSMELAYTCVGTPYYLSPEICQNR-PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISP 224 (257)
T ss_pred cccchhccCCcccccccCCCccccCHHHHcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCC
Confidence 988776544321 1223567779999987643 36789999999999999999999998776555554444433334444
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..+..+...++..++.+|+++.+++.+
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 566778888888999999999999998864
No 337
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.44 E-value=2.4e-13 Score=108.16 Aligned_cols=173 Identities=23% Similarity=0.346 Sum_probs=116.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhh-cccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..|+..|+..|.+.+...-...++...+..+... +.++. ++|. .+++|++++|.++++ .....++.++
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~ 148 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLT---------YLYNVHRIMHRDIKPSNILVNSRGQIKLCDF 148 (284)
T ss_pred EEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHH---------HHHHhcCeeccCCCHHHEEECCCCcEEEccC
Confidence 3578889999988776443222222223333332 44444 6775 468999999999999 4567899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChH-------HHHHHHHHhhC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSA-------DQIYKICQLIG 198 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~-------~~~~~i~~~~~ 198 (234)
|.+....... .....++..|.+||.+.. ..++...|+||+|++++++++|..||++.... ..+....+.+.
T Consensus 149 gl~~~~~~~~-~~~~~~~~~~~aPE~~~~-~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd06620 149 GVSGELINSI-ADTFVGTSTYMSPERIQG-GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV 226 (284)
T ss_pred Ccccchhhhc-cCccccCcccCCHHHHcc-CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh
Confidence 9876553321 223456778999998763 35778999999999999999999999865432 11112222221
Q ss_pred -CCC----CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 199 -SPT----KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 199 -~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.+. ....+..+..+...|+...+.+|+++.+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~ 265 (284)
T cd06620 227 QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCA 265 (284)
T ss_pred hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111 1224556777888899999999999999875
No 338
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.44 E-value=2.4e-13 Score=107.07 Aligned_cols=172 Identities=24% Similarity=0.430 Sum_probs=115.5
Q ss_pred HHHHHhhcCChHHHHHHHHh----hccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 51 LVEMYSKCGHVEKAFKVFNL----MREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~----m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
++..|+..|.+.+..+-... +++..+..+.. ++.|+. ++|+.++.|++++|+++++ .....++.+
T Consensus 79 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~---------~LH~~~i~H~dl~p~nili~~~~~~~l~d 149 (267)
T cd08229 79 IVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALE---------HMHSRRVMHRDIKPANVFITATGVVKLGD 149 (267)
T ss_pred EEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHEEEcCCCCEEECc
Confidence 45556677777765443221 11112223332 355666 8899999999999999999 456789999
Q ss_pred ccccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhhCCCC-
Q 026720 125 LGMVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSS-ADQIYKICQLIGSPT- 201 (234)
Q Consensus 125 ~~~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~-~~~~~~i~~~~~~~~- 201 (234)
++.+........ .....++..|.+||...+ ..++...|+||+|++++++++|..||.+... .....+.......++
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T cd08229 150 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHE-NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL 228 (267)
T ss_pred chhhhccccCCcccccccCCcCccCHHHhcC-CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCC
Confidence 998776543221 223456778999998864 3367889999999999999999999976532 222222222222221
Q ss_pred -CCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 202 -KDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 202 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
....+..+..+...|+..++.+||++.+++.
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 229 PSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred CcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 2345678888889999999999999997653
No 339
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.44 E-value=1.7e-13 Score=110.41 Aligned_cols=134 Identities=22% Similarity=0.379 Sum_probs=103.6
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCccccccccccc--ccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|++++|.++++ .....++.++|.+..... .....++..|.+||.+.. ...++...|+||+|+++++
T Consensus 130 ~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e 206 (308)
T cd06634 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206 (308)
T ss_pred HHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHH
Confidence 7888899999999999999 456789999998776543 223456678999998742 2346778999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhC-CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIG-SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++|..||.+....+....+.+... ......++..+..++..|+...+.+|+++++++..
T Consensus 207 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 9999999987766665555444322 12234677788889999999999999999998764
No 340
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.44 E-value=2.8e-13 Score=108.27 Aligned_cols=135 Identities=21% Similarity=0.291 Sum_probs=98.3
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.|+++. ....++++||.+..+.... .......+..|++||.... ..++...|+||+|++++
T Consensus 145 ~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~ 223 (296)
T cd05051 145 YLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLW 223 (296)
T ss_pred HHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchhhhhHHHHH
Confidence 78888999999999999994 5678999999887654321 1112334567999998864 34789999999999999
Q ss_pred HHHh--CCCCCCCCChHHHHHHHHHhh---C----CCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS--FGILFPGKSSADQIYKICQLI---G----SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~--~~~~f~~~~~~~~~~~i~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ +..||......+....+.... . .+.+...+..+..+...|+..++.+||++.++++
T Consensus 224 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 224 EILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 9998 667887666555544443221 1 1222234467788888899999999999999864
No 341
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.43 E-value=3.4e-13 Score=105.75 Aligned_cols=173 Identities=24% Similarity=0.260 Sum_probs=120.4
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
++..|+..|.+.+...-...++...+..+... +.|+. ++|..++.|++++|+++++ .....++.+|+.+
T Consensus 70 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~---------~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~ 140 (265)
T cd05579 70 LVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALE---------YLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLS 140 (265)
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHcCeecCCCCHHHeEEcCCCCEEEEecccc
Confidence 45567777777766544333444444444443 66666 8899999999999999999 4567889999987
Q ss_pred ccccCCC---------CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh-C
Q 026720 129 KEIDSNL---------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI-G 198 (234)
Q Consensus 129 ~~~~~~~---------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~-~ 198 (234)
....... ......++..|.+||...... ++...|+||+|++++++++|..||......+....+.... .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd05579 141 KVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE 219 (265)
T ss_pred hhcccCcccccccccccccCcccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC
Confidence 7543321 112234566789999886433 6788999999999999999999998777655554443311 1
Q ss_pred CCCCCCCcchhhhhhhhccccCCCCCccc---cccCCC
Q 026720 199 SPTKDSWPLGIQLASNLNWKLPQMGGVNL---LAVMPS 233 (234)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (234)
.|.....+..+..+...++...+.+|+++ .++++.
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 220 WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 12222236677778888888899999999 666653
No 342
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=1.7e-13 Score=102.27 Aligned_cols=171 Identities=23% Similarity=0.248 Sum_probs=126.3
Q ss_pred HHHHHHhhcCChHHHHH--HHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFK--VFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~--~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
+||.+|+..|.+-...+ ......++-..+|..+ .+|+. ++|...++|++++|.|.++ ..+-.++.||
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~---------y~h~k~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALL---------YCHLKRVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHH---------HhccCCcccCCCCHHHhccCCCCCeeccCC
Confidence 56777888887665544 2222334444566555 56666 8888889999999999999 4677899999
Q ss_pred cccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCC
Q 026720 126 GMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSW 205 (234)
Q Consensus 126 ~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 205 (234)
|-...... ....+.+++--|.+||...+. .+...+|+|++|++++|++.|.+||......+.-.+|. +.....+.+-
T Consensus 169 GwsV~~p~-~kR~tlcgt~dyl~pEmv~~~-~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~-k~~~~~p~~i 245 (281)
T KOG0580|consen 169 GWSVHAPS-NKRKTLCGTLDYLPPEMVEGR-GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR-KVDLKFPSTI 245 (281)
T ss_pred CceeecCC-CCceeeecccccCCHhhcCCC-CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH-HccccCCccc
Confidence 97665542 234567888889999999744 46899999999999999999999999888555555554 3444444666
Q ss_pred cchhhhhhhhccccCCCCCccccccCC
Q 026720 206 PLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
++.-..++-.+....+.+|.++.+++.
T Consensus 246 s~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 246 SGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ChhHHHHHHHHhccCccccccHHHHhh
Confidence 667777777777778888888887754
No 343
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.43 E-value=3e-13 Score=110.60 Aligned_cols=135 Identities=19% Similarity=0.304 Sum_probs=98.1
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|++++|.|+++ .....++++||.+........ .....++..|++||...+ ..++...|+||+|++++
T Consensus 194 ~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ 272 (343)
T cd05103 194 FLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 272 (343)
T ss_pred HHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHH
Confidence 7888899999999999999 467789999998876533211 112223456899998763 44788999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCC-CCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGS-PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
++++ |..||++................ +.+...+..+..+...||...+.+|+++.+++.
T Consensus 273 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~ 334 (343)
T cd05103 273 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 334 (343)
T ss_pred HHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9996 88999876654444444332222 223334456666777799999999999999875
No 344
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.43 E-value=4.9e-13 Score=105.60 Aligned_cols=176 Identities=23% Similarity=0.392 Sum_probs=117.4
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+..+-...++..-+..+.. ++.++. ++|+.+++|++++|.++++ .....++.+++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~---------~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLA---------YLHSKGILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHH---------HHhhCCeeecCCChhhEEEcCCCeEEEeecc
Confidence 346667777787776544332222211222222 245555 7888899999999999999 46778999999
Q ss_pred ccccccCCC---CCCCcccCccccccccccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC--
Q 026720 127 MVKEIDSNL---PCTDYVTTRWYRGPEVLLFSE-IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP-- 200 (234)
Q Consensus 127 ~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~-~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~-- 200 (234)
.+....... ......++..|.+||...... .++...|+||+|++++++++|..||.+.........+......+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPI 233 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcC
Confidence 887654311 112234567799999876433 36788999999999999999999998765555444433221111
Q ss_pred CCC---CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 201 TKD---SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 201 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.. ..+..+..+...++..++..|+++++++.+
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 234 PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 111 224566667778889999999999998864
No 345
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.43 E-value=4.1e-13 Score=105.73 Aligned_cols=174 Identities=21% Similarity=0.349 Sum_probs=119.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C-CeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K-GVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~-~~~~~~~~~ 126 (234)
.++..|+..+.+.+...-...++++.+..|... +.|+. ++|+.+++|++++|.++++. . ...++.+|+
T Consensus 79 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~---------~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLS---------YLHENQIIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred EEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEEcCCCCEEEEcccc
Confidence 355667777788776543333444444444444 66777 89999999999999999994 3 357899999
Q ss_pred ccccccCCCC-----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHh---hC
Q 026720 127 MVKEIDSNLP-----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQL---IG 198 (234)
Q Consensus 127 ~a~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~---~~ 198 (234)
.+........ .....++..|.+||.... ..++...|+||+|++++++++|..||...........+.+. ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 228 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG-EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT 228 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhcc-CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC
Confidence 8876643211 122356678999999863 44788999999999999999999999755433222223222 22
Q ss_pred CCCC-CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 199 SPTK-DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.++. ...+..+..+...++..++.+|++..+++++
T Consensus 229 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 229 APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 2222 2345567777788888899999999998864
No 346
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.43 E-value=6e-14 Score=106.42 Aligned_cols=129 Identities=23% Similarity=0.366 Sum_probs=100.4
Q ss_pred ccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccC-CCCcchHHHHHHHHHHHHhCCC
Q 026720 102 GYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEI-YGPEVDKWAMGAIMFEMLSFGI 179 (234)
Q Consensus 102 ~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~~d~~s~g~~l~e~~~~~~ 179 (234)
.++|++++|.|+++ ..+..+++|||.+.++..+..+..-.+-+.|+|||.+..... |...+|+||+|+.++|+.+|.-
T Consensus 188 kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~f 267 (361)
T KOG1006|consen 188 KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNF 267 (361)
T ss_pred hhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCC
Confidence 48999999999999 478899999999999887665554566678999999866555 8999999999999999999999
Q ss_pred CCCCCChHHHHHHHHH-hhCCCCC-------CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 180 LFPGKSSADQIYKICQ-LIGSPTK-------DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 180 ~f~~~~~~~~~~~i~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+.+-.+ ++.++++ ..|.|+. ..++..+...++.|..-+...|+++.++..
T Consensus 268 Pyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 268 PYRKWDS--VFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CcchHHH--HHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 9986433 3333443 2233332 345567778889999999999998887653
No 347
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.42 E-value=4.1e-13 Score=108.34 Aligned_cols=175 Identities=16% Similarity=0.219 Sum_probs=114.8
Q ss_pred HHHHHHhhcCChHHHHHHH--HhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVF--NLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~--~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
.++..|+..|.+.+...-. ..+++..+..+.. ++.|+. ++|..+++|++++|.++++. ....++.++
T Consensus 75 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~---------~LH~~~ivH~dlk~~Nili~~~~~~kl~d~ 145 (314)
T cd08216 75 YVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALD---------YIHSKGFIHRSVKASHILLSGDGKVVLSGL 145 (314)
T ss_pred EEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCcceEEEecCCceEEecC
Confidence 4566778888887765432 1123223333333 255566 88999999999999999994 567888888
Q ss_pred cccccccCCCC--------CCCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH-
Q 026720 126 GMVKEIDSNLP--------CTDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ- 195 (234)
Q Consensus 126 ~~a~~~~~~~~--------~~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~- 195 (234)
+.+......-. ......+..|++||++... ..|+...|+||+|++++|+++|..||.+............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~ 225 (314)
T cd08216 146 RYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRG 225 (314)
T ss_pred ccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 87765432110 1123455679999998543 3478899999999999999999999987655544332211
Q ss_pred hhCC-------C-------------------------CCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 196 LIGS-------P-------------------------TKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 196 ~~~~-------~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.... + .....+..+..+...|+..++-+|+++++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 226 TVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 1000 0 001112344557777899999999999999864
No 348
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.42 E-value=5.4e-13 Score=104.03 Aligned_cols=174 Identities=21% Similarity=0.357 Sum_probs=120.3
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...-...+++..+..+... +.++. ++|+.++.|++++|.++.+. ....++.+++.
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~---------~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~ 145 (254)
T cd06627 75 YIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLA---------YLHEQGVIHRDIKAANILTTKDGVVKLADFGV 145 (254)
T ss_pred EEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHH---------HHhhCCcccCCCCHHHEEECCCCCEEEecccc
Confidence 345556666666655433222222222222222 55555 78888999999999999994 56789999998
Q ss_pred cccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+........ .....++..|.+||...... +....|+|++|++++++++|..||.+........++......+.+...+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
T cd06627 146 ATKLNDVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGIS 224 (254)
T ss_pred ceecCCCcccccccccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCC
Confidence 887655332 12345667799999876433 6788999999999999999999998777655555544322222333456
Q ss_pred chhhhhhhhccccCCCCCccccccCCC
Q 026720 207 LGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+.+..+...++..++.+|++.++++..
T Consensus 225 ~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 225 PELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 678888888888999999999998764
No 349
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.42 E-value=7.4e-14 Score=114.66 Aligned_cols=101 Identities=34% Similarity=0.689 Sum_probs=83.7
Q ss_pred Hhh-hcccccCCcCCCcEEee--CCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLH-RQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~-~~~~~~~~l~p~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
.++ ..+++|.+++|||++.+ ....++|+||.|..+... ....+..+++|.|||++.|.+ |..-+|+||.||.|||
T Consensus 550 klLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en-eitPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYE 627 (752)
T KOG0670|consen 550 KLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASEN-EITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYE 627 (752)
T ss_pred HHHHhcCeeecccCccceEeccCcceeeeccCccccccccc-cccHHHHHHhccCcceeecCc-ccCCccceeeceeeEE
Confidence 444 56899999999999994 568899999999887653 344567889999999999665 7889999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 174 MLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 174 ~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
+-+|+.+|||..+.+.+.-.++.-|.
T Consensus 628 lYtGkIlFpG~TNN~MLrl~me~KGk 653 (752)
T KOG0670|consen 628 LYTGKILFPGRTNNQMLRLFMELKGK 653 (752)
T ss_pred eeccceecCCCCcHHHHHHHHHhcCC
Confidence 99999999999988877665554443
No 350
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.42 E-value=1.1e-12 Score=107.31 Aligned_cols=172 Identities=24% Similarity=0.431 Sum_probs=113.8
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee--CCeeeEeeccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS--KGVIKIGDLGM 127 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~ 127 (234)
++..|+. +.+.+...- ..+++..+..|... +.|+. ++|..+++|++++|.++++. ....++.+||.
T Consensus 93 lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~---------~LH~~givH~dikp~Nili~~~~~~~kl~dfg~ 161 (342)
T cd07854 93 IVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLK---------YIHSANVLHRDLKPANVFINTEDLVLKIGDFGL 161 (342)
T ss_pred EEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHH---------HHHhCCcccCCCCHHHEEEcCCCceEEECCccc
Confidence 5555665 344332210 11223334444444 56666 88988999999999999994 34678999998
Q ss_pred cccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCC-
Q 026720 128 VKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTK- 202 (234)
Q Consensus 128 a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~- 202 (234)
+..+..... .....++..|.+||.+.....++..+|+||+|++++++++|+.||.+....+....+.+....++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07854 162 ARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREE 241 (342)
T ss_pred ceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 876532211 112345678999998765455788999999999999999999999987766665554433221111
Q ss_pred ----------------------------CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 ----------------------------DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
...+.....+...++..++.+|+++++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 242 DRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 1123344556777888899999999998864
No 351
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.41 E-value=4.7e-13 Score=103.18 Aligned_cols=165 Identities=24% Similarity=0.297 Sum_probs=116.3
Q ss_pred HHHHhhccCccccHHHH-HHHH-HhcCCchhhhHhhhcccccCCcCCCcEEee----CCeeeEeeccccccccCCCCCCC
Q 026720 66 KVFNLMREKNLQSWTIM-ISGL-ADNSRGNDAISLHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSNLPCTD 139 (234)
Q Consensus 66 ~~~~~m~~~~~~~~~~~-i~~~-~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~ 139 (234)
++|.++.++.-..|+-- .+.. -+.| ....++|+.++.|+|++|.|.+|. ++..+++|||.|+.........+
T Consensus 145 eLfsriq~~g~~afTErea~eI~~qI~--~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~T 222 (400)
T KOG0604|consen 145 ELFSRIQDRGDQAFTEREASEIMKQIG--LAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMT 222 (400)
T ss_pred HHHHHHHHcccccchHHHHHHHHHHHH--HHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccC
Confidence 45666666554444432 1111 1111 122278988999999999999993 46789999999999876555666
Q ss_pred cccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHHhhCCCCCCCCcchhhh---h
Q 026720 140 YVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSS----ADQIYKICQLIGSPTKDSWPLGIQL---A 212 (234)
Q Consensus 140 ~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~---~ 212 (234)
.+-+++|.|||++- ...|...-|+||+|+++|-++.|-+||.+... ...-.+|....-..+...|++.-+. +
T Consensus 223 Pc~TPyYvaPevlg-~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdl 301 (400)
T KOG0604|consen 223 PCFTPYYVAPEVLG-PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDL 301 (400)
T ss_pred CcccccccCHHHhC-chhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHH
Confidence 77889999999984 56688889999999999999999999997643 3333344444344556667654444 4
Q ss_pred hhhccccCCCCCccccccCCC
Q 026720 213 SNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~ 233 (234)
++...+..+.+|.++++++++
T Consensus 302 IR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 302 IRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HHHHhcCCchhheeHHHhhcC
Confidence 444557788999999988754
No 352
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.41 E-value=9.2e-13 Score=102.60 Aligned_cols=173 Identities=25% Similarity=0.309 Sum_probs=118.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...-...++...+..+... +.++. ++|..++.|++++|+++.+ .....++.+++.
T Consensus 69 ~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~---------~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~ 139 (250)
T cd05123 69 YLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALE---------YLHSLGIIYRDLKPENILLDADGHIKLTDFGL 139 (250)
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHHCCceecCCCcceEEEcCCCcEEEeecCc
Confidence 455556666666555433222333333344333 56666 8898999999999999999 456788999998
Q ss_pred cccccCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 128 VKEIDSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 128 a~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
+...... .......++..|.+||..... .++...|+||+|++++++++|..||..........++.+ ...+.+...+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~ 217 (250)
T cd05123 140 AKELSSEGSRTNTFCGTPEYLAPEVLLGK-GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK-DPLRFPEFLS 217 (250)
T ss_pred ceecccCCCcccCCcCCccccChHHhCCC-CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-CCCCCCCCCC
Confidence 8776443 122334566789999988643 357889999999999999999999987765444444433 2223333445
Q ss_pred chhhhhhhhccccCCCCCccc---cccCCC
Q 026720 207 LGIQLASNLNWKLPQMGGVNL---LAVMPS 233 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 233 (234)
..+..+.+.++..++..|+++ +++.++
T Consensus 218 ~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 218 PEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 677778888999999999999 666543
No 353
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.41 E-value=4.2e-13 Score=106.14 Aligned_cols=175 Identities=17% Similarity=0.309 Sum_probs=120.6
Q ss_pred HHHHHHHHhhcCChHHHHHHHH---------hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-e
Q 026720 48 GTALVEMYSKCGHVEKAFKVFN---------LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-S 116 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~---------~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~ 116 (234)
+..++..|+..|.+.+...... .++...+..+... +.++. ++|+.+++|++++|+|+++ .
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~---------~LH~~~i~H~dlkp~Nili~~ 152 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMD---------HLSNARFVHRDLAARNCLVSS 152 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHH---------HhhhcCcccCcCccceEEEeC
Confidence 3467778888888887755432 1222233333333 55566 8899999999999999999 4
Q ss_pred CCeeeEeeccccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 026720 117 KGVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKI 193 (234)
Q Consensus 117 ~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i 193 (234)
....++.+++.+....... ......++..|.+||...+. .++...|+||+|++++++++ |..||.+.........+
T Consensus 153 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~ 231 (275)
T cd05046 153 QREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQED-DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL 231 (275)
T ss_pred CCcEEEcccccccccCcccccccCCceeEEeecChhhhccC-CCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH
Confidence 5667888888776543211 11222344568999987633 36788999999999999998 77899876555544444
Q ss_pred HH-hhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 194 CQ-LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
.. ....+.....+..+..+...|+...+.+|+++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~ 271 (275)
T cd05046 232 QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271 (275)
T ss_pred HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 32 1122334566778889999999999999999998864
No 354
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.41 E-value=6e-13 Score=112.86 Aligned_cols=169 Identities=19% Similarity=0.256 Sum_probs=129.8
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCcc------ccHHHHHH-HHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCee
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNL------QSWTIMIS-GLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVI 120 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~------~~~~~~i~-~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~ 120 (234)
-.||.+++.+|++-+..+- ..++. .-|..+|. |+. +|-....+|+|+...|+++ ..-..
T Consensus 185 ~mMV~ELaplGSLldrLrk----a~~~~llv~~Lcdya~QiA~aM~---------YLeskrlvHRDLAARNlllasprtV 251 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRK----AKKAILLVSRLCDYAMQIAKAMQ---------YLESKRLVHRDLAARNLLLASPRTV 251 (1039)
T ss_pred hhHHhhhcccchHHHHHhh----ccccceeHHHHHHHHHHHHHHHH---------HHhhhhhhhhhhhhhhheeccccee
Confidence 4689999999998876543 11222 23433322 233 5555668999999999988 45688
Q ss_pred eEeeccccccccCCCCCCCc----ccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHH
Q 026720 121 KIGDLGMVKEIDSNLPCTDY----VTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 121 ~~~~~~~a~~~~~~~~~~~~----~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~ 195 (234)
+++|||+.+.+...-....+ ...-.|-+||.+. .+.|+.++|+|++|+.+|||++ |++|+.|+.-..++.+|=+
T Consensus 252 KI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLr-h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~ 330 (1039)
T KOG0199|consen 252 KICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLR-HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA 330 (1039)
T ss_pred eeecccceeccCCCCcceEecCCCcCcccccCHhHhc-cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc
Confidence 99999998887553222211 1223588999997 5668999999999999999997 6699999999999988877
Q ss_pred hhCCCCCCCCcchhhhhhhhccccCCCCCccccccC
Q 026720 196 LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
+-.-+.+..+++.|=.++.-||...+-+|++|..|.
T Consensus 331 ~erLpRPk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 331 GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred cccCCCCCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 667788888999999999999999999999999885
No 355
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=7.4e-13 Score=111.40 Aligned_cols=137 Identities=20% Similarity=0.320 Sum_probs=113.8
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC-CCCCcccCccccccccccc----ccCCCCcchHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLF----SEIYGPEVDKWAMGAI 170 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~----~~~~~~~~d~~s~g~~ 170 (234)
.+|+..++|++++..|+++ .++-.++.|||......... ..-.++|+|+|+|||++.. ...|....|+||+|+.
T Consensus 145 ~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGIT 224 (1187)
T KOG0579|consen 145 WLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGIT 224 (1187)
T ss_pred HHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhH
Confidence 7899899999999999999 57888999999876654433 3345899999999999743 2348899999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHhhCC--CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 171 MFEMLSFGILFPGKSSADQIYKICQLIGS--PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 171 l~e~~~~~~~f~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
|.||..+.+|-......-.+++|.+.-.. -.+..|+..+..+...|..-.+..|++..++|.+
T Consensus 225 LIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 225 LIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 99999999999999999999888764332 2357899999999999998888889988888764
No 356
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.41 E-value=3.4e-13 Score=113.96 Aligned_cols=136 Identities=24% Similarity=0.357 Sum_probs=95.9
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.|+++. ....++.|||.+..+.... ......++..|++||++.+ ..++..+|+||+|+++|
T Consensus 275 yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDvwSlGviL~ 353 (461)
T PHA03211 275 YIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG-DPYTPSVDIWSAGLVIF 353 (461)
T ss_pred HHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC-CCCCchHHHHHHHHHHH
Confidence 88999999999999999994 5678999999987653321 1223567889999999874 44789999999999999
Q ss_pred HHHhCCC-CCCCC------ChHHHHHHHHHhhCCCC----------------------------CCCCc------chhhh
Q 026720 173 EMLSFGI-LFPGK------SSADQIYKICQLIGSPT----------------------------KDSWP------LGIQL 211 (234)
Q Consensus 173 e~~~~~~-~f~~~------~~~~~~~~i~~~~~~~~----------------------------~~~~~------~~~~~ 211 (234)
|++.+.. +|... ....++.++.+...... ...|. .....
T Consensus 354 El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 433 (461)
T PHA03211 354 EAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEY 433 (461)
T ss_pred HHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHH
Confidence 9998774 44322 12234444444322110 11222 24455
Q ss_pred hhhhccccCCCCCccccccCCC
Q 026720 212 ASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
++..+...++.+|+++.+++.+
T Consensus 434 li~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 434 LVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHcccChhhCcCHHHHhhC
Confidence 6777889999999999999864
No 357
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.41 E-value=8.7e-14 Score=116.55 Aligned_cols=171 Identities=20% Similarity=0.308 Sum_probs=133.5
Q ss_pred HHHHHHhhcCChHHHHHHHH-hhccCccccHHHHH-HHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIMI-SGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~i-~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.+|.+++..|.+.+-.+.-. .++-....-|..+| .+++ ++++...+|+|+...|++. +.-+.+++|||
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~tala---------YLeSkrfVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALA---------YLESKRFVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHH---------HHHhhchhhhhhhhhheeecCcceeeecccc
Confidence 36777888888877655421 23334455566664 3455 7887779999999999999 45688999999
Q ss_pred ccccccCCCCCCCccc--CcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhhCCCCCC
Q 026720 127 MVKEIDSNLPCTDYVT--TRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQLIGSPTKD 203 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~--~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~ 203 (234)
+.+.+..........+ ..-|++||.+++ +.|++++|+|-+|+++||+++ |..||.|..+.|..-++-+.-..|-+.
T Consensus 537 LSR~~ed~~yYkaS~~kLPIKWmaPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~ 615 (974)
T KOG4257|consen 537 LSRYLEDDAYYKASRGKLPIKWMAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPP 615 (974)
T ss_pred hhhhccccchhhccccccceeecCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCC
Confidence 9998876543322222 345899999985 448999999999999999875 779999999999888887777778888
Q ss_pred CCcchhhhhhhhccccCCCCCcccccc
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
.++..+=.++-.||...+-+||+|-+|
T Consensus 616 nCPp~LYslmskcWayeP~kRPrftei 642 (974)
T KOG4257|consen 616 NCPPALYSLMSKCWAYEPSKRPRFTEI 642 (974)
T ss_pred CCChHHHHHHHHHhccCcccCCcHHHH
Confidence 888888889999999999999999876
No 358
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.41 E-value=5.7e-13 Score=103.97 Aligned_cols=174 Identities=22% Similarity=0.330 Sum_probs=121.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
.++..|...+.+.+...-........+..+.. ++.++. ++|+.++.|++++|+++.+. ....++.+++.
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~ 147 (260)
T cd06606 77 NIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLA---------YLHSNGIVHRDIKGANILVDSDGVVKLADFGC 147 (260)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCccccCCCHHHEEEcCCCCEEEccccc
Confidence 45666777777766544332222222222222 355555 88989999999999999994 56778999998
Q ss_pred cccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHH-hhCCCCC
Q 026720 128 VKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSS-ADQIYKICQ-LIGSPTK 202 (234)
Q Consensus 128 a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~-~~~~~~i~~-~~~~~~~ 202 (234)
+........ .....++..|.+||..... .++...|+||+|++++++++|..||.+... .....++.. ......+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (260)
T cd06606 148 AKRLGDIETGEGTGSVRGTPYWMAPEVIRGE-EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIP 226 (260)
T ss_pred EEecccccccccccCCCCCccccCHhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCC
Confidence 887665432 2334566779999988643 368899999999999999999999987662 223333321 1222334
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..++..+..++..|+...+.+|+++.+++.+
T Consensus 227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 5567788888888999899999999998764
No 359
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.41 E-value=1.1e-12 Score=107.48 Aligned_cols=135 Identities=35% Similarity=0.541 Sum_probs=100.5
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|.|+++ ..+..++.++|.+...... .....++..|.+||...+...++...|+||+|+++++++
T Consensus 135 ~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 135 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred HHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc--ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHH
Confidence 7899999999999999999 4667899999988765442 233456778999998764445788899999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCCC------------------------------CCcchhhhhhhhccccCCCCCc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTKD------------------------------SWPLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~ 225 (234)
+|+.||++......+.++.+..+.+... .++..+..++..+...++.+|+
T Consensus 213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 292 (345)
T cd07877 213 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 292 (345)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC
Confidence 9999999877666655554443322111 1233444555667778888999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
+..+++.+
T Consensus 293 t~~e~l~h 300 (345)
T cd07877 293 TAAQALAH 300 (345)
T ss_pred CHHHHhcC
Confidence 98888764
No 360
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.41 E-value=1.5e-12 Score=104.17 Aligned_cols=137 Identities=20% Similarity=0.298 Sum_probs=100.6
Q ss_pred Hhhh-cccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccc---cCCCCcchHHHHHHHH
Q 026720 97 SLHR-QGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFS---EIYGPEVDKWAMGAIM 171 (234)
Q Consensus 97 ~l~~-~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~~d~~s~g~~l 171 (234)
++|. .+++|++++|.++++ .....++.+||.+..+..........++..|.+||.+.+. ..++...|+||+|+++
T Consensus 129 ~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il 208 (296)
T cd06618 129 YLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISL 208 (296)
T ss_pred HHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHH
Confidence 7885 479999999999999 4677899999988766543322333456679999987533 2367889999999999
Q ss_pred HHHHhCCCCCCCCCh-HHHHHHHHHhhC--CCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 172 FEMLSFGILFPGKSS-ADQIYKICQLIG--SPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 172 ~e~~~~~~~f~~~~~-~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++++|+.||..... .+.+.++..... .+....+++.+..+...|+..++.+||++++++..
T Consensus 209 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 209 VELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 999999999976433 334444443321 12222356778888889999999999999998764
No 361
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.40 E-value=7.4e-13 Score=105.97 Aligned_cols=174 Identities=20% Similarity=0.235 Sum_probs=116.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHh---h---ccCccccHHH-------HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL---M---REKNLQSWTI-------MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV 115 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~---m---~~~~~~~~~~-------~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~ 115 (234)
..++..|+..|++.+...-... . .......+.. ++.|+. ++|..+++|++++|.|+++
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~---------~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 92 LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMK---------YLASLNFVHRDLATRNCLV 162 (295)
T ss_pred cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHH---------HHHhcCeeccccChhhEEE
Confidence 4578888998988776532110 0 0001122322 244444 7888899999999999999
Q ss_pred e-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh--CCCCCCCCChHHH
Q 026720 116 S-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS--FGILFPGKSSADQ 189 (234)
Q Consensus 116 ~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~--~~~~f~~~~~~~~ 189 (234)
. ....++.+||.+..+..... ......+..|.+||.... ..++..+|+||+|++++++++ +..||......+.
T Consensus 163 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~ 241 (295)
T cd05097 163 GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV 241 (295)
T ss_pred cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence 4 55689999998876543211 111233457999998764 347899999999999999987 5678876655554
Q ss_pred HHHHHH---hhCC----CCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 190 IYKICQ---LIGS----PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 190 ~~~i~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
...+.+ .... ..+...+..+..+...|+..++.+||+++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 242 IENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 443322 1111 122334567888889999999999999998864
No 362
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.40 E-value=9.2e-13 Score=103.86 Aligned_cols=175 Identities=20% Similarity=0.263 Sum_probs=116.9
Q ss_pred HHHHHHhhcCChHHHHHHH-Hhh--ccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee--CCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLM--REKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS--KGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m--~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~--~~~~~~~ 123 (234)
.++..|+..+.+.....-- ... +...+..+.. ++.|+. ++|..++.|++++|.++++. ....+++
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~---------~lH~~~i~h~dl~p~nil~~~~~~~~~l~ 151 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLK---------YLHDNQIVHRDIKGDNVLVNTYSGVVKIS 151 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHH---------HHHHCCEeecCCCHHHEEEcCCCCeEEEe
Confidence 4566677778887765421 111 1122233333 355666 88999999999999999994 4578999
Q ss_pred eccccccccCCC-CCCCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC--C
Q 026720 124 DLGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG--S 199 (234)
Q Consensus 124 ~~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~--~ 199 (234)
+++.+....... ......++..|.+||..... ..++..+|+||+|++++++++|..||................. .
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T cd06624 152 DFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP 231 (268)
T ss_pred cchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC
Confidence 999887653321 12223466789999987543 2367899999999999999999999986544333222111111 1
Q ss_pred CCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 200 PTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.-+...++.+..+...|+...+.+|+++++++.+
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 1123345567778888999999999999998764
No 363
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.39 E-value=5.7e-13 Score=108.29 Aligned_cols=176 Identities=17% Similarity=0.239 Sum_probs=114.0
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~ 124 (234)
..++..|+..|.+.+...... .+++..+..+... +.|+. ++|+.+++|++++|.|+++. ....++.+
T Consensus 74 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~---------~lH~~~ivHrDlkp~Nill~~~~~~~~~~ 144 (328)
T cd08226 74 LWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLN---------YLHQNGYIHRNIKASHILISGDGLVSLSG 144 (328)
T ss_pred eEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEEeCCCcEEEec
Confidence 345667777778776544321 1333333344444 56666 88998999999999999984 55667777
Q ss_pred ccccccccCCCCC--------CCcccCcccccccccccc-cCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 026720 125 LGMVKEIDSNLPC--------TDYVTTRWYRGPEVLLFS-EIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 125 ~~~a~~~~~~~~~--------~~~~~~~~~~~pe~~~~~-~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~ 195 (234)
++.+......... ....+...|++||++.+. ..++..+|+||+|++++++++|+.||.+............
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~ 224 (328)
T cd08226 145 LSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLK 224 (328)
T ss_pred hHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhc
Confidence 6543322111000 001233458999998643 2367899999999999999999999988766555444332
Q ss_pred hhC----------------------------------------------CCCCCCCcchhhhhhhhccccCCCCCccccc
Q 026720 196 LIG----------------------------------------------SPTKDSWPLGIQLASNLNWKLPQMGGVNLLA 229 (234)
Q Consensus 196 ~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (234)
... .+....++..+..+...++..++.+|+++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e 304 (328)
T cd08226 225 GPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASS 304 (328)
T ss_pred CCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHH
Confidence 110 0111223345667778899999999999999
Q ss_pred cCCC
Q 026720 230 VMPS 233 (234)
Q Consensus 230 ~~~~ 233 (234)
++.+
T Consensus 305 ~l~~ 308 (328)
T cd08226 305 LLSH 308 (328)
T ss_pred HhhC
Confidence 8764
No 364
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.39 E-value=4e-13 Score=104.18 Aligned_cols=162 Identities=22% Similarity=0.293 Sum_probs=112.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+...-...++...+..|... +.|+. ++|+.+++|++++|+|+++ .....++.+++
T Consensus 60 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~---------~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~ 130 (237)
T cd05576 60 VFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALD---------ALHREGIVCRDLNPNNILLDDRGHIQLTYFS 130 (237)
T ss_pred EEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCHHHEEEcCCCCEEEeccc
Confidence 3567788888988776544334555566666655 66776 8899999999999999999 45678899998
Q ss_pred ccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCc
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWP 206 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 206 (234)
.+..+.... .....+..|++||.... ..++...|+||+|++++|+++|..++...... +........+...+
T Consensus 131 ~~~~~~~~~--~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~~~~~~~~~~~~~ 202 (237)
T cd05576 131 RWSEVEDSC--DGEAVENMYCAPEVGGI-SEETEACDWWSLGAILFELLTGKTLVECHPSG-----INTHTTLNIPEWVS 202 (237)
T ss_pred chhcccccc--ccCCcCccccCCcccCC-CCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----cccccccCCcccCC
Confidence 776654421 22344567999998753 33677899999999999999999887643211 11011111223345
Q ss_pred chhhhhhhhccccCCCCCccc
Q 026720 207 LGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~ 227 (234)
..+..+...+...++.+|++.
T Consensus 203 ~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 203 EEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHHHHHccCCHHHhcCC
Confidence 566677777888888888875
No 365
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.39 E-value=3.4e-13 Score=114.22 Aligned_cols=131 Identities=27% Similarity=0.379 Sum_probs=97.1
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-----CCeeeE
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-----KGVIKI 122 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-----~~~~~~ 122 (234)
...++.+||.+|++....+-.+.-. =.+=+.++.-+...+.+.. +|+..+++|||++|.|+... .-.-++
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~---GLpE~e~l~lL~d~~~al~--~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAY---GLPESEFLDLLSDLVSALR--HLRENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred cceEEEeecCCCcHHHHhcCccccc---CCCHHHHHHHHHHHHHHHH--HHHHcCceeccCCCCcEEEeecCCCceEEee
Confidence 3568899999999987643322111 1122222222222222222 67788999999999999883 235699
Q ss_pred eeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 026720 123 GDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPG 183 (234)
Q Consensus 123 ~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~ 183 (234)
.|||-|+.+.........+|+..|.+||..-....|+..+|.||+|+.+|+.++|..||--
T Consensus 166 tDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 166 TDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred ecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 9999999998887888899999999999986445699999999999999999999999873
No 366
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=2.5e-13 Score=105.90 Aligned_cols=128 Identities=31% Similarity=0.363 Sum_probs=99.3
Q ss_pred cccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCC-CCCCCcccCccccccccc
Q 026720 76 LQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSN-LPCTDYVTTRWYRGPEVL 152 (234)
Q Consensus 76 ~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~pe~~ 152 (234)
...|.+- ++++. ++|+..++.++++..|.++ .++..++.|||++++-... ....+++++|-|.|||++
T Consensus 270 tRFYGaEIvsAL~---------YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVl 340 (516)
T KOG0690|consen 270 TRFYGAEIVSALG---------YLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVL 340 (516)
T ss_pred hhhhhHHHHHHhh---------hhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhh
Confidence 3455554 88888 9999999999999999999 5899999999999975432 345678999999999999
Q ss_pred ccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhh
Q 026720 153 LFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLAS 213 (234)
Q Consensus 153 ~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 213 (234)
-. ..|...+|.|+.|+++|||+.|+.||...++.....-|...-.+.+..--+++-.++.
T Consensus 341 eD-nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLs 400 (516)
T KOG0690|consen 341 ED-NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLS 400 (516)
T ss_pred cc-ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHH
Confidence 74 4489999999999999999999999999888777666654333333333344444443
No 367
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.38 E-value=5.9e-13 Score=106.53 Aligned_cols=172 Identities=22% Similarity=0.359 Sum_probs=116.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccH-HHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSW-TIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~-~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.+|..|+..|.+.+...- ..++...+..+ ..++.|+. ++|+.++.|++++|.++.+ .....++.+++.
T Consensus 92 ~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~---------~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~ 161 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALE---------FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF 161 (293)
T ss_pred EEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHH---------HHHhCCEeeccCCHHHEEEcCCCCEEEccCcc
Confidence 456667777777665421 01111222222 23355666 8899999999999999999 456788999997
Q ss_pred cccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC---CC
Q 026720 128 VKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT---KD 203 (234)
Q Consensus 128 a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~---~~ 203 (234)
+....... ......+++.|.+||.... ..++...|+||+|+++|++++|..||.+....+....+.. .+.+. ..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (293)
T cd06647 162 CAQITPEQSKRSTMVGTPYWMAPEVVTR-KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPELQNPE 239 (293)
T ss_pred eecccccccccccccCChhhcCchhhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCCCCCcc
Confidence 76543321 1223456677999998864 4478899999999999999999999987765554333321 12221 22
Q ss_pred CCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 204 SWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
..+..+..+++.|+...+.+|+++++++.+
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 234567778888999999999999998864
No 368
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.38 E-value=2.5e-12 Score=107.14 Aligned_cols=171 Identities=19% Similarity=0.271 Sum_probs=125.3
Q ss_pred HHHHHHhhcCChHHHHHHHH--h-hccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 50 ALVEMYSKCGHVEKAFKVFN--L-MREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~--~-m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
++|..|+.+|++.+-..--+ . +..+.+-..+.+-+|++ +|-+-.++|+++.+.|.+. .....++++|
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgma---------YLes~nfVHrd~a~rNcLv~~e~~iKiadf 681 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMA---------YLESLNFVHRDLATRNCLVDGEFTIKIADF 681 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHH---------HHHhhchhhccccccceeecCcccEEecCc
Confidence 68999999999988654321 1 11222233333355666 7777779999999999999 4677899999
Q ss_pred cccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHhhCC-
Q 026720 126 GMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS--FGILFPGKSSADQIYKICQLIGS- 199 (234)
Q Consensus 126 ~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~--~~~~f~~~~~~~~~~~i~~~~~~- 199 (234)
|.++.+...-. ....+....|+|+|.+. ...+++++|+|++|+.+||+++ ...||.+..+.+.......-...
T Consensus 682 gmsR~lysg~yy~vqgr~vlpiRwmawEsil-lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~ 760 (807)
T KOG1094|consen 682 GMSRNLYSGDYYRVQGRAVLPIRWMAWESIL-LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQ 760 (807)
T ss_pred ccccccccCCceeeecceeeeeeehhHHHHH-hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCC
Confidence 99997754321 12234557799999987 4558999999999999999875 67999987766655554432221
Q ss_pred ------CCCCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 200 ------PTKDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 200 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
+.+..++..+-+++--||.....+||+|+++
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l 797 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL 797 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH
Confidence 3346677788888999999999999999986
No 369
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.37 E-value=1e-12 Score=104.22 Aligned_cols=173 Identities=17% Similarity=0.277 Sum_probs=117.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
..++..|+..|.+.+..+- ..+..+.+..+... +.++. ++|..++.|++++|.++.+ .....++.+++
T Consensus 77 ~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~---------~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg 146 (277)
T cd06641 77 LWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLD---------YLHSEKKIHRDIKAANVLLSEHGEVKLADFG 146 (277)
T ss_pred EEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHH---------HHccCCeecCCCCHHhEEECCCCCEEEeecc
Confidence 4577778888877765421 11222222233222 45555 7888889999999999999 45678899999
Q ss_pred ccccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC-CCCC
Q 026720 127 MVKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP-TKDS 204 (234)
Q Consensus 127 ~a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~-~~~~ 204 (234)
.+..+..... .....++..|.+||.... ..++...|+||+|++++++++|..||.+.........+... ..+ ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 224 (277)
T cd06641 147 VAGQLTDTQIKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN-NPPTLEGN 224 (277)
T ss_pred cceecccchhhhccccCCccccChhhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC-CCCCCCcc
Confidence 8776543211 122345677899998863 34577899999999999999999999876654444443222 222 2234
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...|+...+.+|+++.+++..
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 225 YSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 45677778888999889999999988763
No 370
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.37 E-value=1.1e-12 Score=104.57 Aligned_cols=173 Identities=20% Similarity=0.279 Sum_probs=114.1
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+-......++...+..+.. ++.++. ++|..+++|++++|.++++ .+...++.+|+.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~---------~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 151 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALE---------HLHKLGIIYRDIKLENILLDSNGHVVLTDFGL 151 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCHHHeEECCCCCEEEeeCcc
Confidence 46777888887766544322233333334432 355555 8898999999999999999 567789999998
Q ss_pred cccccCCC--CCCCcccCccccccccccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH---hhCCCC
Q 026720 128 VKEIDSNL--PCTDYVTTRWYRGPEVLLFSE-IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ---LIGSPT 201 (234)
Q Consensus 128 a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~-~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~---~~~~~~ 201 (234)
+....... ......++..|++||...... .++...|+||+|++++++++|..||...........+.+ ....+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (290)
T cd05613 152 SKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY 231 (290)
T ss_pred ceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC
Confidence 87654321 112345677899999875432 356789999999999999999999975433222222222 122333
Q ss_pred CCCCcchhhhhhhhccccCCCCCc-----cccccC
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGV-----NLLAVM 231 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 231 (234)
+...+..+..+...++..++.+|+ ++++++
T Consensus 232 ~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~ 266 (290)
T cd05613 232 PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIK 266 (290)
T ss_pred CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence 344556677777778877777775 555544
No 371
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=2.5e-13 Score=111.09 Aligned_cols=175 Identities=19% Similarity=0.223 Sum_probs=121.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCc-cccHHHHHHHHHhcCCchhhhHhhhc---ccccCCcCCCcEEee-CCeeeEe
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKN-LQSWTIMISGLADNSRGNDAISLHRQ---GYFHRDLKPSNLLVS-KGVIKIG 123 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~-~~~~~~~i~~~~~~g~~~~a~~l~~~---~~~~~~l~p~~~~~~-~~~~~~~ 123 (234)
-.||..|+..|++++.. +.. .. ..+|...+.......++.+ +||.. .++|+|++|.|+++. +..++++
T Consensus 147 ~~LVYEym~nGsL~d~L--~~~---~~~~L~W~~R~kIa~g~A~gL~--yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHL--HGK---KGEPLDWETRLKIALGAARGLA--YLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred EEEEEEccCCCCHHHHh--CCC---CCCCCCHHHHHHHHHHHHHHHH--HHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 36888999999998853 222 22 6799999988887777766 45532 489999999999994 6789999
Q ss_pred eccccccccC-CCCCCCc-ccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHH-----
Q 026720 124 DLGMVKEIDS-NLPCTDY-VTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS---SADQIYKI----- 193 (234)
Q Consensus 124 ~~~~a~~~~~-~~~~~~~-~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~---~~~~~~~i----- 193 (234)
|||+++.... ....... .++.+|.+||+... ...+.++|+||+|+++.|+++|+.+.+... ......++
T Consensus 220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred CccCcccCCccccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 9999977654 3322222 78889999999863 446889999999999999999998887431 11122211
Q ss_pred ---HHhhCCCCC--CCCc--chhhh---hhhhccccCCCCCccccccC
Q 026720 194 ---CQLIGSPTK--DSWP--LGIQL---ASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 194 ---~~~~~~~~~--~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (234)
...+..|.. ..+. +.... +...|....+..||++.+++
T Consensus 299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 112222221 2333 23332 33557777888999988764
No 372
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.37 E-value=1.6e-12 Score=102.83 Aligned_cols=172 Identities=26% Similarity=0.374 Sum_probs=121.3
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMV 128 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a 128 (234)
++..|+..|++.+..+-...++...+..+... +.|+. ++|..++.|++++|.++.+ .....++.+|+.+
T Consensus 79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~---------~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~ 149 (280)
T cd05581 79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALE---------YLHSKGIIHRDLKPENILLDKDMHIKITDFGTA 149 (280)
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeecCCCHHHeEECCCCCEEecCCccc
Confidence 45567777777765543322333333333333 66666 7888899999999999999 4567889999987
Q ss_pred ccccCCCC---------------------CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChH
Q 026720 129 KEIDSNLP---------------------CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSA 187 (234)
Q Consensus 129 ~~~~~~~~---------------------~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~ 187 (234)
........ .....++..|.+||.... ..++...|+||+|++++++++|..||......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (280)
T cd05581 150 KVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY 228 (280)
T ss_pred cccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHH
Confidence 76543221 112344567899998763 33678899999999999999999999987765
Q ss_pred HHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccc----cccCCC
Q 026720 188 DQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNL----LAVMPS 233 (234)
Q Consensus 188 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 233 (234)
....++.+ .....+..+++.+..+.+.++...+.+|+++ ++++.+
T Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 229 LTFQKILK-LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHHh-cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 55544442 2333445667788888888999999999999 777654
No 373
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.37 E-value=3.8e-12 Score=109.13 Aligned_cols=136 Identities=21% Similarity=0.294 Sum_probs=94.1
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
++|..+++|+|++|+|+++ .....++.|||.+..+.... ......++..|++||++.+ ..|+..+|+||+|++++|
T Consensus 282 yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~e 360 (501)
T PHA03210 282 YIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLD 360 (501)
T ss_pred HHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHHHHHHHHHHH
Confidence 7888899999999999999 46778999999998764422 1223568889999999874 447899999999999999
Q ss_pred HHhCCCC-CCCC--ChHHHHHHHHHhhCCCCCCC-------------------------------Ccchhhhhhhhcccc
Q 026720 174 MLSFGIL-FPGK--SSADQIYKICQLIGSPTKDS-------------------------------WPLGIQLASNLNWKL 219 (234)
Q Consensus 174 ~~~~~~~-f~~~--~~~~~~~~i~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~ 219 (234)
|++++.+ +.+. .....+.++.+....+.... .+..+..++..+...
T Consensus 361 ll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~ 440 (501)
T PHA03210 361 MLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTF 440 (501)
T ss_pred HHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhcc
Confidence 9998854 4332 23345555544333221110 111122223446677
Q ss_pred CCCCCccccccCCC
Q 026720 220 PQMGGVNLLAVMPS 233 (234)
Q Consensus 220 ~~~~~~~~~~~~~~ 233 (234)
++.+|++..+++.+
T Consensus 441 DP~~Rpsa~elL~h 454 (501)
T PHA03210 441 DWHLRPGAAELLAL 454 (501)
T ss_pred CcccCcCHHHHhhC
Confidence 88899999988753
No 374
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.37 E-value=1.9e-12 Score=99.90 Aligned_cols=174 Identities=27% Similarity=0.415 Sum_probs=119.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
.++..|...+.+.+...-....+...+..+. .++.++. ++|..++.|+++.|.++.+. ....++.+++.
T Consensus 63 ~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~ 133 (244)
T smart00220 63 YLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALE---------YLHSNGIIHRDLKPENILLDEDGHVKLADFGL 133 (244)
T ss_pred EEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHH---------HHHHcCeecCCcCHHHeEECCCCcEEEccccc
Confidence 3455566666666654322111111222222 2245555 78888999999999999994 46788999998
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCC---
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDS--- 204 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~--- 204 (234)
+.............++..|.+||... ...++...|+|++|+++++++++..||......+...+.......+....
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~pE~~~-~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (244)
T smart00220 134 ARQLDPGGLLTTFVGTPEYMAPEVLL-GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWK 212 (244)
T ss_pred eeeeccccccccccCCcCCCCHHHHc-cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcccccc
Confidence 88766543333455677899999886 34467899999999999999999999987555555545444333222222
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
++..+..+...++..++.+|+++.++++.
T Consensus 213 ~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 213 ISPEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred CCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence 66677788888999999999999998763
No 375
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.36 E-value=5.4e-12 Score=105.18 Aligned_cols=135 Identities=19% Similarity=0.308 Sum_probs=102.6
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCC---CCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNL---PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|++++|.++++. ...+++.|||.+....... ......++..|++||.+... .++...|+||+|++++
T Consensus 254 ~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DvwslGvil~ 332 (401)
T cd05107 254 FLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN-LYTTLSDVWSFGILLW 332 (401)
T ss_pred HHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC-CCCcHhHHHHHHHHHH
Confidence 78888999999999999994 5678999999987643211 11122345679999988643 4688899999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHh-hCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQL-IGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|+++ |..||++....+........ ...+.+...+..+..+...||...+.+||++.+|+.
T Consensus 333 e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 333 EIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred HHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9998 88999877666655554332 222334456778888999999999999999999874
No 376
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.36 E-value=3.5e-12 Score=100.72 Aligned_cols=135 Identities=16% Similarity=0.197 Sum_probs=97.7
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|++++|.++++. ...+++.+||.+........ ......+..|.+||.... ..++...|+||+|++++
T Consensus 128 ~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sDi~slG~il~ 206 (273)
T cd05074 128 YLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSDVWAFGVTMW 206 (273)
T ss_pred HHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc-CccchhhhhHHHHHHHH
Confidence 88988999999999999994 56678999998886643211 111223345788998753 34678899999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
++++ |.+||.+....+....+......+.....+..+..+...|+...+..|+++.+++.
T Consensus 207 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 207 EIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9998 88999877665544444332222223345567777888899999999999998764
No 377
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.36 E-value=7.6e-12 Score=101.73 Aligned_cols=135 Identities=34% Similarity=0.540 Sum_probs=100.1
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|.++++ .....++.+|+.+...... .....++..|.+||.+.+...++...|+||+|+++++++
T Consensus 123 ~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~ 200 (328)
T cd07856 123 YVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ--MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML 200 (328)
T ss_pred HHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC--cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHH
Confidence 8898899999999999999 4567899999988765432 233456678999998765455789999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCC-----------------------C-------CCCcchhhhhhhhccccCCCCCc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPT-----------------------K-------DSWPLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~-----------------------~-------~~~~~~~~~~~~~~~~~~~~~~~ 225 (234)
+|.+||++.........+.+..+.+. . ...+..+..++..++...+.+|+
T Consensus 201 tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 280 (328)
T cd07856 201 EGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRI 280 (328)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCC
Confidence 99999998765444333333222211 1 12345666777778888999999
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
++++++..
T Consensus 281 t~~ell~~ 288 (328)
T cd07856 281 SAAEALAH 288 (328)
T ss_pred CHHHHhcC
Confidence 99988754
No 378
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.36 E-value=1.8e-12 Score=103.02 Aligned_cols=173 Identities=19% Similarity=0.326 Sum_probs=114.8
Q ss_pred HHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 50 ALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.++..|...|.+.+...-- ..++......+... +.|+. ++|..+++|++++|+|+++ .....++.+|+
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~---------~LH~~~i~H~dlkp~nili~~~~~~~l~dfg 153 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGME---------YLGSKRYVHRDLATRNILVESENRVKIGDFG 153 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHH---------HHHHCCceeccCCHhhEEECCCCeEEECCCc
Confidence 4677788888887764321 11222223333332 55666 8899999999999999999 45678999999
Q ss_pred ccccccCCCCC----CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChH---------------
Q 026720 127 MVKEIDSNLPC----TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSA--------------- 187 (234)
Q Consensus 127 ~a~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~--------------- 187 (234)
.+..+...... ........|.+||...+ ..++...|+||+|++++|++++..++.+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05081 154 LTKVLPQDKEYYKVREPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIV 232 (284)
T ss_pred ccccccCCCcceeecCCCCCceEeeCHHHhcc-CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccch
Confidence 88865432211 11122335889998864 34788999999999999999987655432111
Q ss_pred HHHHHHHH-hhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 188 DQIYKICQ-LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 188 ~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..+..+.. ....+.....+..+..+...|+...+.+|+++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 01111111 1122344566778889999999999999999998864
No 379
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.35 E-value=1.9e-12 Score=105.96 Aligned_cols=135 Identities=36% Similarity=0.553 Sum_probs=98.9
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|..+++|++++|.++++ .....++.+||.+...... .....+++.|++||.+.+...++...|+||+|+++++++
T Consensus 133 ~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 133 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred HHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 8899999999999999999 4667899999988765442 223456778999998865445788999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHhhCCCCC------------------------------CCCcchhhhhhhhccccCCCCCc
Q 026720 176 SFGILFPGKSSADQIYKICQLIGSPTK------------------------------DSWPLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 176 ~~~~~f~~~~~~~~~~~i~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 225 (234)
+|..||.+........+++...+.+.. ...+..+..+...+...++.+|+
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 290 (343)
T cd07880 211 TGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI 290 (343)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC
Confidence 999999988776666665543322110 01122334445556677888899
Q ss_pred cccccCCC
Q 026720 226 NLLAVMPS 233 (234)
Q Consensus 226 ~~~~~~~~ 233 (234)
+..+++.+
T Consensus 291 t~~~~l~~ 298 (343)
T cd07880 291 TAAEALAH 298 (343)
T ss_pred CHHHHhcC
Confidence 99888753
No 380
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.35 E-value=2.4e-12 Score=102.95 Aligned_cols=173 Identities=20% Similarity=0.345 Sum_probs=117.4
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
.++..|+..+.+.+...- ..+....+..+... +.++. ++|..+++|++++|.|+.+. ....++.+|+.
T Consensus 93 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~---------~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~ 162 (292)
T cd06657 93 WVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLKALS---------VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 162 (292)
T ss_pred EEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHH---------HHHHCCeecCCCCHHHEEECCCCCEEEccccc
Confidence 456667777777664321 11222223333333 55566 88888999999999999994 56789999998
Q ss_pred cccccCCCC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCC--CCCC
Q 026720 128 VKEIDSNLP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSP--TKDS 204 (234)
Q Consensus 128 a~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~--~~~~ 204 (234)
+..+..... .....++..|.+||.... ..++...|+||+|++++++++|..||.+.........+....... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (292)
T cd06657 163 CAQVSKEVPRRKSLVGTPYWMAPELISR-LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHK 241 (292)
T ss_pred ceecccccccccccccCccccCHHHhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCccc
Confidence 776543221 223456678999998763 346788999999999999999999998776555444333322211 1223
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+..+...++...+.+|+++++++.+
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 45566777778888889999999988764
No 381
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.35 E-value=1.6e-12 Score=103.50 Aligned_cols=174 Identities=20% Similarity=0.367 Sum_probs=114.0
Q ss_pred HHHHHHHhhcCChHHHHHHH-HhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVF-NLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~-~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..|.+.+...-- ..++...+..+... +.++. ++|+.+++|++++|+|+++ .....++.+|
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~---------~lH~~gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMD---------YLGSRQYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HHHHCCeeecccchheEEEcCCCCEEECCC
Confidence 35777888888887754211 01111222222222 44444 7899999999999999999 4567899999
Q ss_pred cccccccCCCC----CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCC--------------CChH
Q 026720 126 GMVKEIDSNLP----CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPG--------------KSSA 187 (234)
Q Consensus 126 ~~a~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~--------------~~~~ 187 (234)
|.+..+..... .....++..|.+||...+ ..++...|+||+|+++++++++..+... ....
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05079 154 GLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ-SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTV 232 (284)
T ss_pred ccccccccCccceeecCCCCCCccccCHHHhcc-CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccH
Confidence 98876643221 112334456899998764 3477889999999999999987654322 1112
Q ss_pred HHHHHHHH-hhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 188 DQIYKICQ-LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 188 ~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
........ ....+.....+..+..+...|+...+.+|+++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 22222222 1223334456677888889999999999999998875
No 382
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.34 E-value=2.7e-12 Score=114.70 Aligned_cols=171 Identities=22% Similarity=0.237 Sum_probs=106.1
Q ss_pred HHHHHHhhcCChHHHHHHHHh---hcc--CccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL---MRE--KNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~---m~~--~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~ 123 (234)
.++..|+..|++.+...-... .++ ....++...+..+.+.....+ ++|+.+++|+|++|+|+++ ..+..++.
T Consensus 78 yLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~--yLHs~GIIHRDLKPeNILLd~dg~vKLi 155 (932)
T PRK13184 78 YYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIE--YVHSKGVLHRDLKPDNILLGLFGEVVIL 155 (932)
T ss_pred EEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHH--HHHHCCccccCCchheEEEcCCCCEEEE
Confidence 466778888888876543211 111 111223322222222211111 7888899999999999999 45678899
Q ss_pred eccccccccCC------------------CC-CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCC
Q 026720 124 DLGMVKEIDSN------------------LP-CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGK 184 (234)
Q Consensus 124 ~~~~a~~~~~~------------------~~-~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~ 184 (234)
|||.+...... +. ....++++.|+|||...+ ..++..+|+||+|++++|+++|+.||.+.
T Consensus 156 DFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 156 DWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG-VPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred ecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 99998765110 00 112457889999999874 34789999999999999999999999875
Q ss_pred ChHHHHHHHHHhhCCCC----CCCCcchhhhhhhhccccCCCCCc
Q 026720 185 SSADQIYKICQLIGSPT----KDSWPLGIQLASNLNWKLPQMGGV 225 (234)
Q Consensus 185 ~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 225 (234)
........ .....|. ....+..+..+...++...+.+|+
T Consensus 235 ~~~ki~~~--~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ 277 (932)
T PRK13184 235 KGRKISYR--DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERY 277 (932)
T ss_pred chhhhhhh--hhccChhhccccccCCHHHHHHHHHHccCChhhCc
Confidence 44333222 1222221 123445555666566666666664
No 383
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.34 E-value=2e-12 Score=115.31 Aligned_cols=141 Identities=28% Similarity=0.429 Sum_probs=98.5
Q ss_pred HHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecccccccc---C----------------CCCCC
Q 026720 79 WTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEID---S----------------NLPCT 138 (234)
Q Consensus 79 ~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~---~----------------~~~~~ 138 (234)
|--++.|++ |+|+.+|+|||++|.|+.+ ...-.+++|||+|.... . .....
T Consensus 703 FreIlEGLa---------YIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~T 773 (1351)
T KOG1035|consen 703 FREILEGLA---------YIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLT 773 (1351)
T ss_pred HHHHHHHHH---------HHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccc
Confidence 344688888 9999999999999999999 45678999999998721 0 01223
Q ss_pred CcccCccccccccccccc--CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH--HhhCCCCC-C-CCcchhhh-
Q 026720 139 DYVTTRWYRGPEVLLFSE--IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKIC--QLIGSPTK-D-SWPLGIQL- 211 (234)
Q Consensus 139 ~~~~~~~~~~pe~~~~~~--~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~--~~~~~~~~-~-~~~~~~~~- 211 (234)
+.+||-.|.|||++.+.. .|+.++|+||+|+++.||+.- |+ ..++.+..+- +....|.+ . .-++...+
T Consensus 774 s~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~--TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 774 SQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FG--TSMERASILTNLRKGSIPEPADFFDPEHPEEA 848 (1351)
T ss_pred cccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CC--chHHHHHHHHhcccCCCCCCcccccccchHHH
Confidence 457778899999998766 699999999999999999864 43 3334332222 22222222 2 22333333
Q ss_pred -hhhhccccCCCCCccccccCCC
Q 026720 212 -ASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++.....++-+||+..+++++
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhhc
Confidence 3444557789999999998875
No 384
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.33 E-value=1.7e-12 Score=103.01 Aligned_cols=174 Identities=21% Similarity=0.361 Sum_probs=117.3
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
..++..|+..|.+.+...... .++...+..+... +.|+. ++|..++.|++++|+++++ .....+++++
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~---------~lH~~~i~H~dl~p~nil~~~~~~~~l~df 153 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMD---------YLGSQRYIHRDLAARNILVESEDLVKISDF 153 (284)
T ss_pred eEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHhEEEcCCCCEEEccc
Confidence 456777888888877654321 1222233333332 55555 7888899999999999999 4567899999
Q ss_pred cccccccCCCCC----CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChH--------------
Q 026720 126 GMVKEIDSNLPC----TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSA-------------- 187 (234)
Q Consensus 126 ~~a~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~-------------- 187 (234)
+.+......... ........|.+||..... .++...|+||+|++++|+++|..|+......
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05038 154 GLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTS-KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIV 232 (284)
T ss_pred ccccccccCCcceeccCCCCCcccccCcHHHccC-CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccH
Confidence 988876532111 112233458889987643 4678899999999999999999888754221
Q ss_pred HHHHHHHH-hhCCCCCCCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 188 DQIYKICQ-LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 188 ~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
........ ....+.+...+..+..+...|+...+.+|+++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 233 TRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11122222 2223334455677888889999999999999998864
No 385
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.33 E-value=2.5e-12 Score=116.04 Aligned_cols=138 Identities=17% Similarity=0.204 Sum_probs=89.7
Q ss_pred HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C-------------------CeeeEeeccccccccCC--------
Q 026720 83 ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K-------------------GVIKIGDLGMVKEIDSN-------- 134 (234)
Q Consensus 83 i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~-------------------~~~~~~~~~~a~~~~~~-------- 134 (234)
+.|+. ++|..+++|+|++|.|+++. . ...++.+||.++.....
T Consensus 90 ~~al~---------~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~ 160 (793)
T PLN00181 90 VEIVN---------AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKL 160 (793)
T ss_pred HHHHH---------HHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhh
Confidence 66677 89999999999999999993 1 23455666666532110
Q ss_pred ---------CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC-CCC
Q 026720 135 ---------LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT-KDS 204 (234)
Q Consensus 135 ---------~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~-~~~ 204 (234)
.......++++|+|||++.+. .|+..+|+||+||+++||+++.+++..... ....+......+. ...
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 237 (793)
T PLN00181 161 EEVKKQPFPMKQILAMEMSWYTSPEEDNGS-SSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQILLN 237 (793)
T ss_pred hccccCCCcccccccCCCcceEChhhhccC-CCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChhhhhc
Confidence 001123567889999998744 479999999999999999998887764321 1112221111111 122
Q ss_pred CcchhhhhhhhccccCCCCCccccccCCC
Q 026720 205 WPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
+++. ..+...++...+.+|+++.+++.+
T Consensus 238 ~~~~-~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 238 WPKE-ASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred CHHH-HHHHHHhCCCChhhCcChHHHhhc
Confidence 3332 233445778889999999998753
No 386
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.33 E-value=6.6e-12 Score=100.21 Aligned_cols=134 Identities=14% Similarity=0.221 Sum_probs=109.2
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCCC--CCc-ccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLPC--TDY-VTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~~--~~~-~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|+.+++|.|+...|-.+. ..-.++.|-.+.+.++..-.. .+. -....|++||.+. +..|+..+|+||+|+++|
T Consensus 411 hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~-n~~yssasDvWsfGVllW 489 (563)
T KOG1024|consen 411 HLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQ-NSHYSSASDVWSFGVLLW 489 (563)
T ss_pred HHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHh-hhhhcchhhhHHHHHHHH
Confidence 88999999999999888884 345688888888877653210 111 1123489999987 677999999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccC
Q 026720 173 EMLS-FGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 173 e~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
|+++ |+.|+.+.+..+...-+.+....-.+..+++.+-..+..||...+.+||+|+.++
T Consensus 490 ELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 490 ELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred HHHhcCCCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 9996 7799998888888877888888888889999999999999999999999999875
No 387
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.32 E-value=5.3e-12 Score=100.59 Aligned_cols=172 Identities=20% Similarity=0.251 Sum_probs=112.9
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~ 127 (234)
.++..|+..|.+.+....-..++...+..|... +.++. ++|..++.|++++|.++++ .+...++.+|+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~---------~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~ 151 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALD---------HLHQLGIIYRDIKLENILLDSEGHVVLTDFGL 151 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHH---------HHHHCCeeccCCCHHHeEECCCCCEEEEECcc
Confidence 367778877777665432111222233334333 55555 7888889999999999999 456789999998
Q ss_pred cccccCCCC--CCCcccCccccccccccccc-CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH---hhCCCC
Q 026720 128 VKEIDSNLP--CTDYVTTRWYRGPEVLLFSE-IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ---LIGSPT 201 (234)
Q Consensus 128 a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~-~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~---~~~~~~ 201 (234)
+..+..... .....++..|.+||...+.. ..+...|+||+|++++++++|..||...+.......+.+ ....+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd05583 152 SKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF 231 (288)
T ss_pred ccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCC
Confidence 876544322 12234677899999875432 256789999999999999999999975432222222211 222233
Q ss_pred CCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 202 KDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
+...+..+..+...++..++..|+++.++
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~R~t~~~~ 260 (288)
T cd05583 232 PKTMSAEARDFIQKLLEKDPKKRLGANGA 260 (288)
T ss_pred CcccCHHHHHHHHHHhcCCHhhccCcchH
Confidence 34455667777777888888899886543
No 388
>PF13041 PPR_2: PPR repeat family
Probab=99.32 E-value=2.1e-12 Score=74.99 Aligned_cols=46 Identities=33% Similarity=0.578 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHHHhhcCChHHHHHHHHhhcc----CccccHHHHHHHHHh
Q 026720 43 LDVAIGTALVEMYSKCGHVEKAFKVFNLMRE----KNLQSWTIMISGLAD 88 (234)
Q Consensus 43 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~~~~~~i~~~~~ 88 (234)
||.++||+||.+|++.|++++|.++|++|.+ ||..|||++|+||++
T Consensus 1 P~~~~yn~li~~~~~~~~~~~a~~l~~~M~~~g~~P~~~Ty~~li~~~~k 50 (50)
T PF13041_consen 1 PDVVTYNTLISGYCKAGKFEEALKLFKEMKKRGIKPDSYTYNILINGLCK 50 (50)
T ss_pred CchHHHHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHcC
Confidence 7999999999999999999999999999985 799999999999984
No 389
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.31 E-value=1.4e-12 Score=112.92 Aligned_cols=170 Identities=20% Similarity=0.318 Sum_probs=131.4
Q ss_pred HHHHHHhhcCChHHHHHHHHh--hccCccccHHHH--HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNL--MREKNLQSWTIM--ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~--m~~~~~~~~~~~--i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
.||.+||..|++.+..+-+.. |. ...++|... +.|+. ++|...++|++++-+|+++ ..+-+++.|
T Consensus 97 WLVMEfC~gGSVTDLVKn~~g~rl~-E~~IaYI~re~lrgl~---------HLH~nkviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 97 WLVMEFCGGGSVTDLVKNTKGNRLK-EEWIAYILREILRGLA---------HLHNNKVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred EEEeeccCCccHHHHHhhhcccchh-hHHHHHHHHHHHHHHH---------HHhhcceeeecccCceEEEeccCcEEEee
Confidence 478999999999888765541 22 133444443 44555 8998889999999999999 467889999
Q ss_pred ccccccccCCC-CCCCcccCccccccccccccc----CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 125 LGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSE----IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 125 ~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~----~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
||...++.... ..++.+++++|+|||++...+ -|....|+||+|+...||..|.+|+-+.-..-. +|.+...
T Consensus 167 FGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra---LF~IpRN 243 (953)
T KOG0587|consen 167 FGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA---LFLIPRN 243 (953)
T ss_pred eeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh---hccCCCC
Confidence 99999886643 456789999999999986544 367899999999999999999999988765555 4555555
Q ss_pred CCC-----CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 200 PTK-----DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 200 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
|++ .-|.+.+..++..|..-+-.+|++..+++.
T Consensus 244 PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 244 PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 554 467777777777788888888888888765
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=1.1e-11 Score=97.27 Aligned_cols=119 Identities=33% Similarity=0.469 Sum_probs=92.3
Q ss_pred HHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccc
Q 026720 54 MYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEI 131 (234)
Q Consensus 54 ~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~ 131 (234)
+|...|++-=-.+--+++|+.....|.+- +-++- ++|.++++.++++.+|+++ ..+..++.++|.+++-
T Consensus 331 eyv~ggdlmfhmqrqrklpeeharfys~ei~lal~---------flh~rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 331 EYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALN---------FLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHH---------HHhhcCeeeeeccccceEEccCCceeecccchhhcC
Confidence 45555554332333344555555667665 44455 7889999999999999999 5788999999999875
Q ss_pred cCC-CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCC
Q 026720 132 DSN-LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFP 182 (234)
Q Consensus 132 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~ 182 (234)
... -...+++++|.|.|||++. +..|...+|.|++|+++.||+.|+.||+
T Consensus 402 l~~gd~tstfcgtpnyiapeilr-geeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 402 LGPGDTTSTFCGTPNYIAPEILR-GEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred CCCCcccccccCCCcccchhhhc-ccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 443 3456789999999999998 5568999999999999999999999998
No 391
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.28 E-value=1e-11 Score=104.46 Aligned_cols=132 Identities=19% Similarity=0.386 Sum_probs=102.2
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCC--CCCcccCcccccccccccccCCCCcchHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLP--CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFE 173 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e 173 (234)
+|-+...+|+++...|.+. ...+.++.|||+++.+..... ..+..-.+-|.|||-+.++. |+.++|+|++|++|||
T Consensus 380 YLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNt-FSiKSDVWAFGVLLWE 458 (1157)
T KOG4278|consen 380 YLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT-FSIKSDVWAFGVLLWE 458 (1157)
T ss_pred HHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccc-cccchhhHHHHHHHHH
Confidence 5666678999999999888 456789999999988754321 11112234589999987544 7899999999999999
Q ss_pred HHh-CCCCCCCCChHHHHHHHHH-hhCCCCCCCCcchhhhhhhhccccCCCCCcccccc
Q 026720 174 MLS-FGILFPGKSSADQIYKICQ-LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAV 230 (234)
Q Consensus 174 ~~~-~~~~f~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (234)
+.+ |+.||||.+ ..+.+.+.+ ......++.++...-+|++-||+--+-+|++|.++
T Consensus 459 IATYGMsPYPGid-lSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 459 IATYGMSPYPGID-LSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred HHhcCCCCCCCcc-HHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 997 678998765 455556655 44556678899999999999999999999999876
No 392
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.23 E-value=1.1e-12 Score=108.26 Aligned_cols=118 Identities=26% Similarity=0.382 Sum_probs=94.0
Q ss_pred HhhhcccccCCcCCCcEEeeCC----eeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
++|..+++|+|++|.|++++++ -.+++|||.|+.+.+..-.+..++++.|.|||++. +..||...|+||.|+++|
T Consensus 679 ~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLr-nkGyNrSLDMWSVGVIiY 757 (888)
T KOG4236|consen 679 YLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLR-NKGYNRSLDMWSVGVIIY 757 (888)
T ss_pred HhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHh-hccccccccceeeeEEEE
Confidence 8888889999999999999532 36999999999998877777899999999999997 556999999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhcc
Q 026720 173 EMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNW 217 (234)
Q Consensus 173 e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 217 (234)
--++|..||..+.++..-++-..-| -++..|.+.-.+++++.-
T Consensus 758 VsLSGTFPFNEdEdIndQIQNAaFM--yPp~PW~eis~~AidlIn 800 (888)
T KOG4236|consen 758 VSLSGTFPFNEDEDINDQIQNAAFM--YPPNPWSEISPEAIDLIN 800 (888)
T ss_pred EEecccccCCCccchhHHhhccccc--cCCCchhhcCHHHHHHHH
Confidence 9999999999776666544433333 345567765555554433
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.23 E-value=2.6e-11 Score=105.12 Aligned_cols=135 Identities=21% Similarity=0.274 Sum_probs=88.4
Q ss_pred HhhhcccccCCcCCCcEEee--CCeeeEeeccccccccCCC--CCCCcccCccccccccccccc----------------
Q 026720 97 SLHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSE---------------- 156 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~---------------- 156 (234)
++|+.+++|+|++|.|+++. ....+++|||.+..+.... ......+++.|++||.+....
T Consensus 270 yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp 349 (566)
T PLN03225 270 GLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSP 349 (566)
T ss_pred HHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccc
Confidence 88999999999999999995 3578999999998654321 223456788999999653211
Q ss_pred -----CCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC--------CCCCc------c-------hhh
Q 026720 157 -----IYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT--------KDSWP------L-------GIQ 210 (234)
Q Consensus 157 -----~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~--------~~~~~------~-------~~~ 210 (234)
.++..+|+||+||+++||+.+.. +.......+.+.+...+... ....+ + ...
T Consensus 350 ~l~~~~~~~k~DVwSlGviL~el~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 427 (566)
T PLN03225 350 VLWQLNLPDRFDIYSAGLIFLQMAFPNL--RSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGW 427 (566)
T ss_pred hhccccCCCCcccHHHHHHHHHHHhCcC--CCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHH
Confidence 23445699999999999998554 33444444444433221100 00000 0 011
Q ss_pred hhhhhccccCCCCCccccccCCC
Q 026720 211 LASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+...+...++.+|++..+++.+
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhCC
Confidence 35555667789999999998864
No 394
>PF12854 PPR_1: PPR repeat
Probab=99.22 E-value=1.5e-11 Score=64.92 Aligned_cols=33 Identities=39% Similarity=0.700 Sum_probs=26.8
Q ss_pred ccchhHHHHHHHHHHHhhcCChHHHHHHHHhhc
Q 026720 40 GLELDVAIGTALVEMYSKCGHVEKAFKVFNLMR 72 (234)
Q Consensus 40 g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 72 (234)
|+.||.+|||+||.+||+.|++++|.++|++|+
T Consensus 2 G~~Pd~~ty~~lI~~~Ck~G~~~~A~~l~~~M~ 34 (34)
T PF12854_consen 2 GCEPDVVTYNTLIDGYCKAGRVDEAFELFDEMK 34 (34)
T ss_pred CCCCcHhHHHHHHHHHHHCCCHHHHHHHHHhCc
Confidence 677888888888888888888888888888774
No 395
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.19 E-value=4.9e-12 Score=105.71 Aligned_cols=134 Identities=26% Similarity=0.442 Sum_probs=109.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCcc-ccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNL-QSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~-~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
+||.+|+..|.+.+...-..+|.+... .-|..++++.. ++|...++|++++..|+++. ....+++|||.
T Consensus 131 ylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsave---------YcH~k~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 131 YLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVE---------YCHSKNIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred EEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHH---------HHhhcceeccccchhhcccccccceeeecccc
Confidence 466788888888888777777776433 34555688877 89999999999999999995 44589999999
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYK 192 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~ 192 (234)
...+.......+.++++.|.+||+..+...-...+|+|++|+++|.++.|..||+|....+.--+
T Consensus 202 S~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r 266 (596)
T KOG0586|consen 202 STFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR 266 (596)
T ss_pred ceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccch
Confidence 88887666677889999999999999777668999999999999999999999998754443333
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.19 E-value=2.5e-11 Score=98.82 Aligned_cols=169 Identities=24% Similarity=0.328 Sum_probs=110.0
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhh---------hcccccCCcCCCcEEe-eCCee
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLH---------RQGYFHRDLKPSNLLV-SKGVI 120 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~---------~~~~~~~~l~p~~~~~-~~~~~ 120 (234)
||.+|-..|++.+-. ..++++|+.+.+......++.. +|| +..+.|||++..|+++ ++..+
T Consensus 285 LVt~fh~kGsL~dyL-------~~ntisw~~~cria~SmarGLa--~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTc 355 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYL-------KANTISWNSLCRIAESMARGLA--HLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTC 355 (534)
T ss_pred EEeeeccCCcHHHHH-------HhccccHHHHHHHHHHHHHHHH--HhcccCCcCCCCCCccccccccccceEEccCCcE
Confidence 455555566655532 2588999865332211111111 444 4458999999999999 67888
Q ss_pred eEeeccccccccCCCCC---CCcccCcccccccccccccCCC-----CcchHHHHHHHHHHHHhCCCCCC-CC-------
Q 026720 121 KIGDLGMVKEIDSNLPC---TDYVTTRWYRGPEVLLFSEIYG-----PEVDKWAMGAIMFEMLSFGILFP-GK------- 184 (234)
Q Consensus 121 ~~~~~~~a~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~-----~~~d~~s~g~~l~e~~~~~~~f~-~~------- 184 (234)
.++|||+|..+...++. .+.+|++.|+|||++-+.-++. ..+|+||+|.++||++++-..+. |.
T Consensus 356 cIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlp 435 (534)
T KOG3653|consen 356 CIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLP 435 (534)
T ss_pred EeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCc
Confidence 99999999988765543 3468999999999997654443 57999999999999998654442 11
Q ss_pred --------ChHHHHHH-HHH-hhCCCCCCCCc-----chhhhhhhhccccCCCCCcccc
Q 026720 185 --------SSADQIYK-ICQ-LIGSPTKDSWP-----LGIQLASNLNWKLPQMGGVNLL 228 (234)
Q Consensus 185 --------~~~~~~~~-i~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 228 (234)
...+..+. +.+ +....-+..|- ..+.+.+.-||..++..|.|.+
T Consensus 436 fe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 436 FEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred hhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 23333333 222 33333344554 3455556669999988887754
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=1.6e-11 Score=103.42 Aligned_cols=100 Identities=33% Similarity=0.596 Sum_probs=78.9
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccc---cC---------------------------------------
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEI---DS--------------------------------------- 133 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~---~~--------------------------------------- 133 (234)
.+|+.+.+|+|++|||+++ .++..++.|||++..+ |.
T Consensus 744 sVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h 823 (1034)
T KOG0608|consen 744 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQH 823 (1034)
T ss_pred HHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhh
Confidence 4688899999999999999 5899999999998743 10
Q ss_pred -CCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh
Q 026720 134 -NLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI 197 (234)
Q Consensus 134 -~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~ 197 (234)
+..-...++++.|+|||++. ...|+.+-|.||.|++|+||+.|.+||-+....+.-.+|..+-
T Consensus 824 ~r~~ahslvgt~nyiapevl~-r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~ 887 (1034)
T KOG0608|consen 824 QRILAHSLVGTPNYIAPEVLA-RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWR 887 (1034)
T ss_pred hhhhhhhhcCCCcccChHHhc-ccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehh
Confidence 00112246788899999997 4558999999999999999999999999877666655655443
No 398
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.16 E-value=4e-11 Score=95.23 Aligned_cols=121 Identities=28% Similarity=0.511 Sum_probs=89.6
Q ss_pred HHHHhhccCccccHH---------HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-C------------------
Q 026720 66 KVFNLMREKNLQSWT---------IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-K------------------ 117 (234)
Q Consensus 66 ~~~~~m~~~~~~~~~---------~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~------------------ 117 (234)
.+|+.|++-+..+|- .++.+.+ .+|+..+.|.|++|.|+++. +
T Consensus 176 S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~---------fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ 246 (415)
T KOG0671|consen 176 STFDFLKENNYIPFPIDHIRHMGYQLLESVA---------FLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPL 246 (415)
T ss_pred hHHHHhccCCccccchHHHHHHHHHHHHHHH---------HHHhcceeecCCChheEEEeccceEEEeccCCccceeccC
Confidence 467777775554442 1244444 78888899999999999983 1
Q ss_pred --CeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 026720 118 --GVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 118 --~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~ 195 (234)
...++.|||.|..-+. .....+.|+.|.|||++.+.+ |+.--|+||.||+|.|+.+|..+|..-.+.+.+.-+-+
T Consensus 247 ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMer 323 (415)
T KOG0671|consen 247 KSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMER 323 (415)
T ss_pred CCcceEEEecCCcceecc--CcceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHH
Confidence 1235667777766544 235678899999999998544 88999999999999999999999998888887744434
Q ss_pred hhC
Q 026720 196 LIG 198 (234)
Q Consensus 196 ~~~ 198 (234)
..|
T Consensus 324 IlG 326 (415)
T KOG0671|consen 324 ILG 326 (415)
T ss_pred hhC
Confidence 444
No 399
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.15 E-value=1.1e-10 Score=85.76 Aligned_cols=99 Identities=27% Similarity=0.456 Sum_probs=76.3
Q ss_pred Hhhhc-ccccCCcCCCcEEee-CCeeeEeeccccccccCCCCCCCcccCccccccccccc---ccCCCCcchHHHHHHHH
Q 026720 97 SLHRQ-GYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLF---SEIYGPEVDKWAMGAIM 171 (234)
Q Consensus 97 ~l~~~-~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~~~~d~~s~g~~l 171 (234)
++|++ .++|+|++|.|++++ .+-.+++|||.+.-+..++...--.+-..|+|||.+.. ...|+.++|+||+|+.+
T Consensus 163 ~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItm 242 (282)
T KOG0984|consen 163 FLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITM 242 (282)
T ss_pred HHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhh
Confidence 66654 489999999999994 67889999999888877654432233346899999743 22589999999999999
Q ss_pred HHHHhCCCCCCCCC-hHHHHHHHHH
Q 026720 172 FEMLSFGILFPGKS-SADQIYKICQ 195 (234)
Q Consensus 172 ~e~~~~~~~f~~~~-~~~~~~~i~~ 195 (234)
.|+..++.||+.-+ ..+++.++.+
T Consensus 243 iElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 243 IEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred hhhhhccccccccCCHHHHHHHHhc
Confidence 99999999998644 4555555554
No 400
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.15 E-value=2.4e-11 Score=112.10 Aligned_cols=166 Identities=13% Similarity=0.105 Sum_probs=99.7
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhh---hcccccCCcCCCcEEeeC-CeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLH---RQGYFHRDLKPSNLLVSK-GVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~---~~~~~~~~l~p~~~~~~~-~~~~~~~ 124 (234)
.+|.+|+..|.+.+..+ .++.+....+... ..|+. ++| ..+++|++++|.++++.. ...++.
T Consensus 759 ~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~---------yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~- 825 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALR---------FLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR- 825 (968)
T ss_pred EEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHH---------HhccCCCCCeecCCCCHHhEEECCCCceEEE-
Confidence 57788888888887653 2222222222222 34444 677 457999999999999843 222322
Q ss_pred ccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHH-H----
Q 026720 125 LGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKS----SADQIYKIC-Q---- 195 (234)
Q Consensus 125 ~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~----~~~~~~~i~-~---- 195 (234)
++....... .....++..|+|||+..+ ..|+.++|+||+|+++||+++|+.||+... ......+.. .
T Consensus 826 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 901 (968)
T PLN00113 826 LSLPGLLCT---DTKCFISSAYVAPETRET-KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHL 901 (968)
T ss_pred ecccccccc---CCCccccccccCcccccC-CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccch
Confidence 333322211 122356788999999874 458899999999999999999999986421 111111110 0
Q ss_pred -hhCCCCC-----CCCcc--hhhhhhhhccccCCCCCccccccCC
Q 026720 196 -LIGSPTK-----DSWPL--GIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 196 -~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
....|.. ..+.+ .+..+...||..++.+||++++++.
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred hheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 0001111 11111 2233455699999999999998864
No 401
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.13 E-value=5.6e-10 Score=96.75 Aligned_cols=172 Identities=17% Similarity=0.272 Sum_probs=121.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHh-hccCccccHHHHH-HHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTIMI-SGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~~i-~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~ 125 (234)
--||..|.-.|.+.+-.+.-+. +-.++...|..+| .|+- +++.+.++|+++...|++. ...+.++.+|
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~---------YLe~qrlVHrdLaaRNVLVksP~hvkitdf 842 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMK---------YLEEQRLVHRDLAARNVLVKSPNHVKITDF 842 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHH---------HHHhcchhhhhhhhhheeecCCCeEEEEec
Confidence 5788889999998887665332 4446778888884 4555 7888889999999999999 4678899999
Q ss_pred cccccccCCCC---CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHh-hCCC
Q 026720 126 GMVKEIDSNLP---CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS-FGILFPGKSSADQIYKICQL-IGSP 200 (234)
Q Consensus 126 ~~a~~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~-~~~~f~~~~~~~~~~~i~~~-~~~~ 200 (234)
|+++.+...-. ..+....+.|+|-|.+. .+.|+..+|+||+|+.+||+++ |..|+.|....++- ..++. -.-+
T Consensus 843 gla~ll~~d~~ey~~~~gK~pikwmale~i~-~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~-dlle~geRLs 920 (1177)
T KOG1025|consen 843 GLAKLLAPDEKEYSAPGGKVPIKWMALESIR-IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP-DLLEKGERLS 920 (1177)
T ss_pred chhhccCcccccccccccccCcHHHHHHHhh-ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh-HHHhccccCC
Confidence 99987654211 11122234577778776 5568999999999999999997 55888887655543 33332 2233
Q ss_pred CCCCCcchhhhhhhhccccCCCCCccccccC
Q 026720 201 TKDSWPLGIQLASNLNWKLPQMGGVNLLAVM 231 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (234)
.+..++--.=-.+-.||..|...|++|.++.
T Consensus 921 qPpiCtiDVy~~mvkCwmid~~~rp~fkel~ 951 (1177)
T KOG1025|consen 921 QPPICTIDVYMVMVKCWMIDADSRPTFKELA 951 (1177)
T ss_pred CCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence 3444432222234459999999999998763
No 402
>PF12854 PPR_1: PPR repeat
Probab=99.11 E-value=4e-11 Score=63.23 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=32.3
Q ss_pred CCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHH
Q 026720 4 ANENPNSVTLVSLVSACTGLINVRAGESIHSYAV 37 (234)
Q Consensus 4 ~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~ 37 (234)
.|+.||.+|||+||+++|+.|++++|.+++++|+
T Consensus 1 ~G~~Pd~~ty~~lI~~~Ck~G~~~~A~~l~~~M~ 34 (34)
T PF12854_consen 1 RGCEPDVVTYNTLIDGYCKAGRVDEAFELFDEMK 34 (34)
T ss_pred CCCCCcHhHHHHHHHHHHHCCCHHHHHHHHHhCc
Confidence 4899999999999999999999999999999984
No 403
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.02 E-value=1.8e-10 Score=99.58 Aligned_cols=137 Identities=24% Similarity=0.255 Sum_probs=95.5
Q ss_pred HHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeC------CeeeEeeccccccccCCC----CCCCcccCccccccccc
Q 026720 83 ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK------GVIKIGDLGMVKEIDSNL----PCTDYVTTRWYRGPEVL 152 (234)
Q Consensus 83 i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~------~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~~~pe~~ 152 (234)
..|++ +||+-.++|+|++|.|+++.. ..+++.|||+++.+.... ...+..|+.+|+|||.+
T Consensus 616 ~~Gla---------HLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L 686 (903)
T KOG1027|consen 616 ASGLA---------HLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQL 686 (903)
T ss_pred HHHHH---------HHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHH
Confidence 77888 999999999999999999942 467899999999875432 24567889999999999
Q ss_pred ccccCCCCcchHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHHhh----CCCCCCCCcchhhhhhhhccccCCCCCccc
Q 026720 153 LFSEIYGPEVDKWAMGAIMFEMLSF-GILFPGKSSADQIYKICQLI----GSPTKDSWPLGIQLASNLNWKLPQMGGVNL 227 (234)
Q Consensus 153 ~~~~~~~~~~d~~s~g~~l~e~~~~-~~~f~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (234)
...+. +..+|++|+||++++.++| +.||-+.-..+. .|.... .-.+...| ++.+++.+| .+..+-.|++.
T Consensus 687 ~~~~~-~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~~~~d~-eA~dLI~~m-l~~dP~~RPsa 761 (903)
T KOG1027|consen 687 REDRK-TQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLEPLPDC-EAKDLISRM-LNPDPQLRPSA 761 (903)
T ss_pred hcccc-CcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeeccCchH-HHHHHHHHh-cCCCcccCCCH
Confidence 75443 6789999999999998876 799965433322 222211 11222233 444444444 34556677887
Q ss_pred cccCCC
Q 026720 228 LAVMPS 233 (234)
Q Consensus 228 ~~~~~~ 233 (234)
.+++.+
T Consensus 762 ~~VL~H 767 (903)
T KOG1027|consen 762 TDVLNH 767 (903)
T ss_pred HHHhCC
Confidence 777654
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.00 E-value=1.3e-09 Score=83.13 Aligned_cols=126 Identities=33% Similarity=0.535 Sum_probs=88.6
Q ss_pred HHHHHHHhhcCChHHHHHHHHh-hccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNL-MREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~-m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~ 125 (234)
..++.+|+..+.+.+....... +....+..+... +.++. ++|..++.|++++|.++.+. ....++.++
T Consensus 72 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~i~h~di~~~ni~v~~~~~~~l~d~ 142 (225)
T smart00221 72 LYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALE---------YLHSLGIVHRDLKPENILLGMDGLVKLADF 142 (225)
T ss_pred eEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH---------HHHhCCeecCCCCHHHEEEcCCCCEEEeeC
Confidence 3466667777777665543322 222223333222 45555 78888899999999999994 467789999
Q ss_pred cccccccCCC--CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 026720 126 GMVKEIDSNL--PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPG 183 (234)
Q Consensus 126 ~~a~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~ 183 (234)
+.+....... ......++..|.+||.......++...|+|++|++++++++|+.||++
T Consensus 143 g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 143 GLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 9888776532 223345666789999873334467799999999999999999999987
No 405
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=1.5e-09 Score=88.38 Aligned_cols=176 Identities=24% Similarity=0.337 Sum_probs=118.0
Q ss_pred hHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhh--hcccccCCcCCCcEEee----
Q 026720 44 DVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLH--RQGYFHRDLKPSNLLVS---- 116 (234)
Q Consensus 44 ~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~--~~~~~~~~l~p~~~~~~---- 116 (234)
|.-+|.+ |.+||...+++=-.+-...|.++...+..-+ ++++. ++- +..++|.+++|.++++.
T Consensus 539 DtdsFCT-VLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~---------YLNEikpPIIHYDLKPgNILLv~Gta 608 (775)
T KOG1151|consen 539 DTDSFCT-VLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALK---------YLNEIKPPIIHYDLKPGNILLVNGTA 608 (775)
T ss_pred cccccee-eeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHH---------HHhccCCCeeeeccCCccEEEecCcc
Confidence 3334433 4579999999887777777887766655544 56655 442 45699999999999993
Q ss_pred CCeeeEeeccccccccCCCC--------CCCcccCcccccccccccc---cCCCCcchHHHHHHHHHHHHhCCCCCCCCC
Q 026720 117 KGVIKIGDLGMVKEIDSNLP--------CTDYVTTRWYRGPEVLLFS---EIYGPEVDKWAMGAIMFEMLSFGILFPGKS 185 (234)
Q Consensus 117 ~~~~~~~~~~~a~~~~~~~~--------~~~~~~~~~~~~pe~~~~~---~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~ 185 (234)
++-.++.|||+.+.+..... .....++-||.+||.++-. +..+.++|+||.|+++|+.+.|+.||-..-
T Consensus 609 cGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 609 CGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred cceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 34568999999887644221 1234678899999997533 356899999999999999999999997543
Q ss_pred h-HHHHHH--HHH--hhCCCCCCCCcchhhhhhhhccccCCCCCccccc
Q 026720 186 S-ADQIYK--ICQ--LIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLA 229 (234)
Q Consensus 186 ~-~~~~~~--i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (234)
. .+++.. |.+ ....|.....+.+-+.+++.|...-..+|++..+
T Consensus 689 sQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~q 737 (775)
T KOG1151|consen 689 SQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQ 737 (775)
T ss_pred hHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHH
Confidence 2 233322 221 2233444444445666777777666666655443
No 406
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=2.4e-09 Score=86.90 Aligned_cols=175 Identities=24% Similarity=0.332 Sum_probs=111.3
Q ss_pred hhHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhc--------ccccCCcCCCcEE
Q 026720 43 LDVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQ--------GYFHRDLKPSNLL 114 (234)
Q Consensus 43 ~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~--------~~~~~~l~p~~~~ 114 (234)
.+..|.-.||..|-..|++-+-. . ++.++-+.+++-......+.. +||.+ .|.|||++.-|++
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL------~-r~tv~~~~ml~LalS~AsGLa--HLH~eI~GTqgKPaIAHRDlKSKNIL 348 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYL------N-RNTVTTEGMLKLALSIASGLA--HLHMEIVGTQGKPAIAHRDLKSKNIL 348 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHH------h-hccCCHHHHHHHHHHHhhhHH--HHHHHHhcCCCCchhhccccccccEE
Confidence 34555567888999999887642 2 355555555443222222222 55532 3899999999999
Q ss_pred e-eCCeeeEeeccccccccCCC-----CCCCcccCcccccccccccccC---C--CCcchHHHHHHHHHHHHh-------
Q 026720 115 V-SKGVIKIGDLGMVKEIDSNL-----PCTDYVTTRWYRGPEVLLFSEI---Y--GPEVDKWAMGAIMFEMLS------- 176 (234)
Q Consensus 115 ~-~~~~~~~~~~~~a~~~~~~~-----~~~~~~~~~~~~~pe~~~~~~~---~--~~~~d~~s~g~~l~e~~~------- 176 (234)
. .++.+.+.|+|+|..-.... ..+.-+++..|+|||++....+ | =...|+||+|.++||++.
T Consensus 349 VKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi 428 (513)
T KOG2052|consen 349 VKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGI 428 (513)
T ss_pred EccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCE
Confidence 9 56788999999988654321 3345678999999999853221 1 157899999999999864
Q ss_pred ---CCCCCCCCC----hHHHHHHH-H-HhhCCCCCCCCcc-----hhhhhhhhccccCCCCCcc
Q 026720 177 ---FGILFPGKS----SADQIYKI-C-QLIGSPTKDSWPL-----GIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 177 ---~~~~f~~~~----~~~~~~~i-~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 226 (234)
..+||.+.. +.+...++ | ++.+.+.+.-|.. .+..+++-||...+-.|.+
T Consensus 429 ~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRlt 492 (513)
T KOG2052|consen 429 VEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLT 492 (513)
T ss_pred ehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhH
Confidence 346777653 34444443 2 3333444455552 3333556699887766654
No 407
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.87 E-value=1.6e-08 Score=86.29 Aligned_cols=137 Identities=24% Similarity=0.335 Sum_probs=83.8
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCC--cccCcccccccccccccC----------------
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTD--YVTTRWYRGPEVLLFSEI---------------- 157 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~pe~~~~~~~---------------- 157 (234)
++|..+++|++++|.|+++ .....++.|||.+........... ...++.|.+||.+.....
T Consensus 324 ~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~ 403 (507)
T PLN03224 324 KLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPF 403 (507)
T ss_pred HHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhh
Confidence 7888889999999999999 456789999999876543222111 223678999998742210
Q ss_pred ---C--CCcchHHHHHHHHHHHHhCCC-CCCCCChHHHHHHH-------HHhh--CCCCCCCCc----chhhhhhhhccc
Q 026720 158 ---Y--GPEVDKWAMGAIMFEMLSFGI-LFPGKSSADQIYKI-------CQLI--GSPTKDSWP----LGIQLASNLNWK 218 (234)
Q Consensus 158 ---~--~~~~d~~s~g~~l~e~~~~~~-~f~~~~~~~~~~~i-------~~~~--~~~~~~~~~----~~~~~~~~~~~~ 218 (234)
| ....|+||+|+++++|+.+.. +|.+......-.+. ++.. ...+...|+ ...+.+.++...
T Consensus 404 ~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~ 483 (507)
T PLN03224 404 AWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITK 483 (507)
T ss_pred HHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhcc
Confidence 1 134799999999999999874 77643222211111 1111 111212222 233344444444
Q ss_pred cCC--CCCccccccCCC
Q 026720 219 LPQ--MGGVNLLAVMPS 233 (234)
Q Consensus 219 ~~~--~~~~~~~~~~~~ 233 (234)
.|+ .+|+|..+++.+
T Consensus 484 ~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 484 RDQANRGRLSVGQALSH 500 (507)
T ss_pred CCCCcccCCCHHHHhCC
Confidence 443 679999988865
No 408
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.73 E-value=2.9e-08 Score=88.19 Aligned_cols=112 Identities=21% Similarity=0.213 Sum_probs=79.3
Q ss_pred eEeeccccccccCC---CCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh
Q 026720 121 KIGDLGMVKEIDSN---LPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI 197 (234)
Q Consensus 121 ~~~~~~~a~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~ 197 (234)
...+++.++.+... ......++++.|++||++.+. .|+..+|+||+||++||+++|..||.+....+.+..+....
T Consensus 518 ~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~-~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~ 596 (669)
T cd05610 518 IGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGK-PHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRD 596 (669)
T ss_pred ccccCCCchhhhcccccccCCceeeCccccCHHHcCCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC
Confidence 44555555443221 112345789999999999754 48899999999999999999999999888777776665432
Q ss_pred CC-CCC-CCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 198 GS-PTK-DSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 198 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.. +.. ...+..+..+...++..++.+|+++.+++.+
T Consensus 597 ~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h 634 (669)
T cd05610 597 IPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQH 634 (669)
T ss_pred CCCCcccccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence 22 111 2233445556777888899999999988754
No 409
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.72 E-value=5.6e-08 Score=76.28 Aligned_cols=136 Identities=27% Similarity=0.357 Sum_probs=91.3
Q ss_pred HhhhcccccCCcCCCcEEeeC----CeeeEeeccccccccCCCCC--------CCcccCccccccccccc----ccCCCC
Q 026720 97 SLHRQGYFHRDLKPSNLLVSK----GVIKIGDLGMVKEIDSNLPC--------TDYVTTRWYRGPEVLLF----SEIYGP 160 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~~----~~~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~~pe~~~~----~~~~~~ 160 (234)
.+|..++.|++++|.|++..+ .-.+++||.++..++..-++ .+.+++--|+|||++.- ...|..
T Consensus 191 FlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDK 270 (463)
T KOG0607|consen 191 FLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDK 270 (463)
T ss_pred HHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccc
Confidence 578889999999999999931 23589999888776543222 22345556999998621 235788
Q ss_pred cchHHHHHHHHHHHHhCCCCCCCC-----------ChHHHHHHHHHhhC----CCCCCCCcchhhhhhhhcc---ccCCC
Q 026720 161 EVDKWAMGAIMFEMLSFGILFPGK-----------SSADQIYKICQLIG----SPTKDSWPLGIQLASNLNW---KLPQM 222 (234)
Q Consensus 161 ~~d~~s~g~~l~e~~~~~~~f~~~-----------~~~~~~~~i~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~ 222 (234)
.-|.||+|+++|-|+.|=+||.|. .=...-.++|+.+. ..+...|.-.-.+..++.. ..+.+
T Consensus 271 rCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~ 350 (463)
T KOG0607|consen 271 RCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAK 350 (463)
T ss_pred cccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHH
Confidence 899999999999999999999863 12233344555443 4555667644444444433 34666
Q ss_pred CCccccccCC
Q 026720 223 GGVNLLAVMP 232 (234)
Q Consensus 223 ~~~~~~~~~~ 232 (234)
+|.+...+++
T Consensus 351 ~rlsa~~vln 360 (463)
T KOG0607|consen 351 QRLSAAQVLN 360 (463)
T ss_pred hhhhhhhccC
Confidence 6666666655
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.71 E-value=9.1e-09 Score=87.47 Aligned_cols=170 Identities=19% Similarity=0.300 Sum_probs=126.6
Q ss_pred HHHhhcCChHHHHHHHHhhccCccccHHHH--HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccccc
Q 026720 53 EMYSKCGHVEKAFKVFNLMREKNLQSWTIM--ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVK 129 (234)
Q Consensus 53 ~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~--i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~ 129 (234)
..||..|.+++...+-.-+. .+-++|-+. +.|+. ++|+.+-+||+++-.|++++ .+-.++.|||.+.
T Consensus 91 MEycgggslQdiy~~Tgpls-elqiayvcRetl~gl~---------ylhs~gk~hRdiKGanilltd~gDvklaDfgvsa 160 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLS-ELQIAYVCRETLQGLK---------YLHSQGKIHRDIKGANILLTDEGDVKLADFGVSA 160 (829)
T ss_pred EEecCCCcccceeeecccch-hHHHHHHHhhhhccch---------hhhcCCcccccccccceeecccCceeecccCchh
Confidence 46788888888765543322 233445444 55555 88988878999999999994 5678999999988
Q ss_pred cccCCC-CCCCcccCccccccccccc--ccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhC----CCCC
Q 026720 130 EIDSNL-PCTDYVTTRWYRGPEVLLF--SEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIG----SPTK 202 (234)
Q Consensus 130 ~~~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~----~~~~ 202 (234)
++.... ....+++++.|+|||+..- ...|+.+.|+|++|+...|+-.-.+|..+.-....+.-..+..- ..|+
T Consensus 161 qitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk 240 (829)
T KOG0576|consen 161 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDK 240 (829)
T ss_pred hhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCC
Confidence 876543 3456899999999999632 23499999999999999999888877765555444444433322 3566
Q ss_pred CCCcchhhhhhhhccccCCCCCccccccCC
Q 026720 203 DSWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
..|.+.++.+.+....-.+++|++-+.++.
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 899999999999999999999999888764
No 411
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.65 E-value=2.5e-08 Score=80.46 Aligned_cols=102 Identities=32% Similarity=0.561 Sum_probs=74.7
Q ss_pred HhhhcccccCCcCCCcEEee--CCeeeEeecccccccc---------------CC--C--------------C-------
Q 026720 97 SLHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEID---------------SN--L--------------P------- 136 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~a~~~~---------------~~--~--------------~------- 136 (234)
++|..+++|+|++|.|++++ ..-..+.|||+|.... .. + +
T Consensus 147 ~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~ 226 (418)
T KOG1167|consen 147 HLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRC 226 (418)
T ss_pred hhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceecc
Confidence 67889999999999999995 4456788888877210 00 0 0
Q ss_pred -------CCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHHhhC
Q 026720 137 -------CTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFP-GKSSADQIYKICQLIG 198 (234)
Q Consensus 137 -------~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~-~~~~~~~~~~i~~~~~ 198 (234)
.....|+++|.+||++...+.-+..+|+||.|+++..++++..||- ...+.+.+.++.-..|
T Consensus 227 ~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG 296 (418)
T KOG1167|consen 227 NDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFG 296 (418)
T ss_pred CCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhC
Confidence 0012477899999999877777899999999999999999996655 4455566666654444
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.62 E-value=2.2e-08 Score=87.12 Aligned_cols=146 Identities=23% Similarity=0.275 Sum_probs=101.9
Q ss_pred HHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCC-----CCCCCcccCccccccccc
Q 026720 79 WTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSN-----LPCTDYVTTRWYRGPEVL 152 (234)
Q Consensus 79 ~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~pe~~ 152 (234)
+=.++.|.. ++|..++.|++++|++.++. .+..++.|||.+.-.... ....+.+++..|.|||+.
T Consensus 426 fKqL~~Gv~---------y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~ 496 (601)
T KOG0590|consen 426 FKQLLRGVK---------YLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVL 496 (601)
T ss_pred HHHHHHHHH---------HHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccc
Confidence 334466766 89999999999999999994 568899999987765332 234567899999999999
Q ss_pred ccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHHhhCCCCCCCCcchhhhhh-------hhccccCCCCC
Q 026720 153 LFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIY-KICQLIGSPTKDSWPLGIQLAS-------NLNWKLPQMGG 224 (234)
Q Consensus 153 ~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 224 (234)
.+.......+|+||.|+++..|..++.|+.-....+... ..-..............+.++. .-.....+.+|
T Consensus 497 ~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R 576 (601)
T KOG0590|consen 497 TGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKR 576 (601)
T ss_pred cccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhhe
Confidence 877766889999999999999999998887544333321 1111112222222222333332 22346789999
Q ss_pred ccccccCCC
Q 026720 225 VNLLAVMPS 233 (234)
Q Consensus 225 ~~~~~~~~~ 233 (234)
+++++|+++
T Consensus 577 ~ti~~i~~d 585 (601)
T KOG0590|consen 577 ITIEQILND 585 (601)
T ss_pred ecHHHHhhC
Confidence 999998864
No 413
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.53 E-value=1.4e-07 Score=70.72 Aligned_cols=117 Identities=33% Similarity=0.572 Sum_probs=76.9
Q ss_pred HHHHHHHhhcCChHHHHHHHH-hhccCccccHH-HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeC--CeeeEee
Q 026720 49 TALVEMYSKCGHVEKAFKVFN-LMREKNLQSWT-IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK--GVIKIGD 124 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~-~m~~~~~~~~~-~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~--~~~~~~~ 124 (234)
..++..|...+.+.+-..-.. ..+...+..+. .++.++. ++|..++.|++++|.|+.+.. ....+.+
T Consensus 66 ~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~---------~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d 136 (215)
T cd00180 66 LYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLE---------YLHSNGIIHRDLKPENILLDSDNGKVKLAD 136 (215)
T ss_pred EEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCHhhEEEeCCCCcEEEec
Confidence 345666666666665433211 11112222222 2245555 788888999999999999954 6788999
Q ss_pred ccccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 125 LGMVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 125 ~~~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
++.+....... ..........|.+||.......++...|+|++|++++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 137 FGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred CCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 98887665432 122244566788899886432567889999999999998
No 414
>TIGR00756 PPR pentatricopeptide repeat domain (PPR motif). This family has a similar consensus to the TPR domain (tetratricopeptide), pfam pfam00515, a 33-residue repeat. It is predicted to form a pair of antiparallel helices similar to that of TPR.
Probab=98.48 E-value=1.2e-07 Score=50.13 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=30.0
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhccchh
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNGLELD 44 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~ 44 (234)
+|||++|++|++.+++++|.++|.+|.+.|+.||
T Consensus 1 ~~~n~li~~~~~~~~~~~a~~~~~~M~~~g~~p~ 34 (35)
T TIGR00756 1 VTYNTLIDGLCKAGRVEEALELFKEMLERGIEPD 34 (35)
T ss_pred CcHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCC
Confidence 4789999999999999999999999998888886
No 415
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.44 E-value=9.3e-08 Score=80.36 Aligned_cols=86 Identities=34% Similarity=0.538 Sum_probs=74.0
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEML 175 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~ 175 (234)
++|+++++||+++-.|+.+ ..+++++.|||.+.-.... +.-.++++..|.|||++-+.+.-..-.|+|++|+++|.+.
T Consensus 685 hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytiv 763 (772)
T KOG1152|consen 685 HLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIV 763 (772)
T ss_pred cccccCceecccccccEEEecCCeEEEeeccchhhhcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEE
Confidence 8899999999999999999 6789999999988876553 5666889999999999987665578899999999999988
Q ss_pred hCCCCCCC
Q 026720 176 SFGILFPG 183 (234)
Q Consensus 176 ~~~~~f~~ 183 (234)
..+-||.+
T Consensus 764 ykenpyyn 771 (772)
T KOG1152|consen 764 YKENPYYN 771 (772)
T ss_pred eccCCCcC
Confidence 88877753
No 416
>PF01535 PPR: PPR repeat; InterPro: IPR002885 This entry represents the PPR repeat. Pentatricopeptide repeat (PPR) proteins are characterised by tandem repeats of a degenerate 35 amino acid motif []. Most of PPR proteins have roles in mitochondria or plastid []. PPR repeats were discovered while screening Arabidopsis proteins for those predicted to be targeted to mitochondria or chloroplast [, ]. Some of these proteins have been shown to play a role in post-transcriptional processes within organelles and they are thought to be sequence-specific RNA-binding proteins [, , ]. Plant genomes have between one hundred to five hundred PPR genes per genome whereas non-plant genomes encode two to six PPR proteins. Although no PPR structures are yet known, the motif is predicted to fold into a helix-turn-helix structure similar to those found in the tetratricopeptide repeat (TPR) family (see PDOC50005 from PROSITEDOC) []. The plant PPR protein family has been divided in two subfamilies on the basis of their motif content and organisation [, ]. Examples of PPR repeat-containing proteins include PET309 P32522 from SWISSPROT, which may be involved in RNA stabilisation [], and crp1, which is involved in RNA processing []. The repeat is associated with a predicted plant protein O49549 from SWISSPROT that has a domain organisation similar to the human BRCA1 protein.
Probab=98.37 E-value=3.8e-07 Score=46.77 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=19.2
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhcc
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNGL 41 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~ 41 (234)
+|||++|++|++.+++++|.+++.+|.+.|+
T Consensus 1 v~y~~li~~~~~~~~~~~a~~~~~~M~~~g~ 31 (31)
T PF01535_consen 1 VTYNSLISGYCKMGQFEEALEVFDEMRERGI 31 (31)
T ss_pred CcHHHHHHHHHccchHHHHHHHHHHHhHCcC
Confidence 3566666666666666666666666665553
No 417
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.35 E-value=1.9e-07 Score=79.13 Aligned_cols=90 Identities=33% Similarity=0.493 Sum_probs=72.8
Q ss_pred hHhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHH
Q 026720 96 ISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEM 174 (234)
Q Consensus 96 ~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~ 174 (234)
.++|+-++++++.++.++.+ ..+..++.+|++.+.....-.. +++.-|++||++.+ .....|.||+|++.+|+
T Consensus 111 d~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~---cgt~eymApEI~~g---h~~a~D~ws~gvl~fel 184 (612)
T KOG0603|consen 111 DHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA---CGTYEYRAPEIING---HLSAADWWSFGVLAFEL 184 (612)
T ss_pred hhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc---ccchhhhhhHhhhc---cCCcccchhhhhhHHHH
Confidence 36777788999999999999 5788999999998887653222 67778999999973 46889999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHH
Q 026720 175 LSFGILFPGKSSADQIYKICQ 195 (234)
Q Consensus 175 ~~~~~~f~~~~~~~~~~~i~~ 195 (234)
++|..||-+ +....|.+
T Consensus 185 ltg~~pf~~----~~~~~Il~ 201 (612)
T KOG0603|consen 185 LTGTLPFGG----DTMKRILK 201 (612)
T ss_pred hhCCCCCch----HHHHHHhh
Confidence 999999987 44444444
No 418
>PF13812 PPR_3: Pentatricopeptide repeat domain
Probab=98.35 E-value=4.8e-07 Score=47.50 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=29.0
Q ss_pred eehHHHHHHHhcCchhhhhHhHHHHHHHHhccch
Q 026720 10 SVTLVSLVSACTGLINVRAGESIHSYAVVNGLEL 43 (234)
Q Consensus 10 ~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~ 43 (234)
+.|||++|.+|++.|+++.|.+++.+|.+.|+.|
T Consensus 1 v~ty~~ll~a~~~~g~~~~a~~~~~~M~~~gv~P 34 (34)
T PF13812_consen 1 VHTYNALLRACAKAGDPDAALQLFDEMKEQGVKP 34 (34)
T ss_pred CcHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 3688888999888888888888888888888776
No 419
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.33 E-value=6.8e-07 Score=80.05 Aligned_cols=102 Identities=38% Similarity=0.536 Sum_probs=81.6
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCC----------------CCCCcccCcccccccccccccCCC
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNL----------------PCTDYVTTRWYRGPEVLLFSEIYG 159 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~----------------~~~~~~~~~~~~~pe~~~~~~~~~ 159 (234)
++|.-+++|++++|++.++ .-+..++.||++.+.....+ .-...++++.|.+||++. ...|.
T Consensus 158 ylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil-rqgyg 236 (1205)
T KOG0606|consen 158 YLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL-RQGYG 236 (1205)
T ss_pred hhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhh-hhccC
Confidence 6788889999999999999 46788999999876542211 223457889999999986 45589
Q ss_pred CcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 160 PEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 160 ~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
.=+|.|++|+++||.+-|..||.|+...+.+-++......
T Consensus 237 kpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~ 276 (1205)
T KOG0606|consen 237 KPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE 276 (1205)
T ss_pred CCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc
Confidence 9999999999999999999999999887777776654443
No 420
>TIGR00756 PPR pentatricopeptide repeat domain (PPR motif). This family has a similar consensus to the TPR domain (tetratricopeptide), pfam pfam00515, a 33-residue repeat. It is predicted to form a pair of antiparallel helices similar to that of TPR.
Probab=98.31 E-value=5e-07 Score=47.59 Aligned_cols=34 Identities=24% Similarity=0.597 Sum_probs=25.4
Q ss_pred ccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCC
Q 026720 77 QSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPS 111 (234)
Q Consensus 77 ~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~ 111 (234)
++||++|++|++.|+.++|.++|.. |...|+.|+
T Consensus 1 ~~~n~li~~~~~~~~~~~a~~~~~~-M~~~g~~p~ 34 (35)
T TIGR00756 1 VTYNTLIDGLCKAGRVEEALELFKE-MLERGIEPD 34 (35)
T ss_pred CcHHHHHHHHHHCCCHHHHHHHHHH-HHHcCCCCC
Confidence 3677888888888888888888777 556677775
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.27 E-value=1.9e-06 Score=66.50 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=72.5
Q ss_pred cccCcccccccccccccCC--CCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-HhhCCCCCCCCcchhhhhhhhc
Q 026720 140 YVTTRWYRGPEVLLFSEIY--GPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKIC-QLIGSPTKDSWPLGIQLASNLN 216 (234)
Q Consensus 140 ~~~~~~~~~pe~~~~~~~~--~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~ 216 (234)
-.-++.|++||.+...+.. -...|+||+++++||+-+++.||.+-...+.--+|. +......+..-+.-...+++.|
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~ic 425 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNIC 425 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHH
Confidence 3456789999998654421 256799999999999999999999999999887764 4444333333344667788999
Q ss_pred cccCCCCCccccccCC
Q 026720 217 WKLPQMGGVNLLAVMP 232 (234)
Q Consensus 217 ~~~~~~~~~~~~~~~~ 232 (234)
..-++-+||.|..|+|
T Consensus 426 mnedpgkrpkfdmivp 441 (448)
T KOG0195|consen 426 MNEDPGKRPKFDMIVP 441 (448)
T ss_pred hcCCCCcCCCcceehh
Confidence 9999999999999887
No 422
>PF01535 PPR: PPR repeat; InterPro: IPR002885 This entry represents the PPR repeat. Pentatricopeptide repeat (PPR) proteins are characterised by tandem repeats of a degenerate 35 amino acid motif []. Most of PPR proteins have roles in mitochondria or plastid []. PPR repeats were discovered while screening Arabidopsis proteins for those predicted to be targeted to mitochondria or chloroplast [, ]. Some of these proteins have been shown to play a role in post-transcriptional processes within organelles and they are thought to be sequence-specific RNA-binding proteins [, , ]. Plant genomes have between one hundred to five hundred PPR genes per genome whereas non-plant genomes encode two to six PPR proteins. Although no PPR structures are yet known, the motif is predicted to fold into a helix-turn-helix structure similar to those found in the tetratricopeptide repeat (TPR) family (see PDOC50005 from PROSITEDOC) []. The plant PPR protein family has been divided in two subfamilies on the basis of their motif content and organisation [, ]. Examples of PPR repeat-containing proteins include PET309 P32522 from SWISSPROT, which may be involved in RNA stabilisation [], and crp1, which is involved in RNA processing []. The repeat is associated with a predicted plant protein O49549 from SWISSPROT that has a domain organisation similar to the human BRCA1 protein.
Probab=98.20 E-value=1.4e-06 Score=44.61 Aligned_cols=30 Identities=37% Similarity=0.610 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhhcCChHHHHHHHHhhccCc
Q 026720 46 AIGTALVEMYSKCGHVEKAFKVFNLMREKN 75 (234)
Q Consensus 46 ~~~~~li~~~~~~g~~~~a~~~~~~m~~~~ 75 (234)
++||+||.+|++.|.+++|.++|++|.+.+
T Consensus 1 v~y~~li~~~~~~~~~~~a~~~~~~M~~~g 30 (31)
T PF01535_consen 1 VTYNSLISGYCKMGQFEEALEVFDEMRERG 30 (31)
T ss_pred CcHHHHHHHHHccchHHHHHHHHHHHhHCc
Confidence 367777777777777777777777776543
No 423
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=98.14 E-value=1.1e-06 Score=69.40 Aligned_cols=118 Identities=19% Similarity=0.286 Sum_probs=70.1
Q ss_pred HhhhcccccCCcCCCcEEe-eCCeeeEeeccccccccCCCCCCCcccCcccccccccccc-------cCCCCcchHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFS-------EIYGPEVDKWAMG 168 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~-------~~~~~~~d~~s~g 168 (234)
.+|..+++|.+++|+++++ .++...+++|+........... ......+.+||..... -.++...|.|++|
T Consensus 160 ~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG 237 (288)
T PF14531_consen 160 NLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLG 237 (288)
T ss_dssp HHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHH
T ss_pred HHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHH
Confidence 7889999999999999999 4678889999876665443222 2333567778776432 1368899999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCC
Q 026720 169 AIMFEMLSFGILFPGKSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQ 221 (234)
Q Consensus 169 ~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (234)
+++|.++.+..||........... ...... ..++..+.++.......+
T Consensus 238 ~~ly~lWC~~lPf~~~~~~~~~~~---~f~~C~--~~Pe~v~~LI~~lL~~~~ 285 (288)
T PF14531_consen 238 ITLYSLWCGRLPFGLSSPEADPEW---DFSRCR--DMPEPVQFLIRGLLQRNP 285 (288)
T ss_dssp HHHHHHHHSS-STCCCGGGSTSGG---GGTTSS-----HHHHHHHHHHT-SSG
T ss_pred HHHHHHHHccCCCCCCCccccccc---cchhcC--CcCHHHHHHHHHHccCCc
Confidence 999999999999985421111100 222222 556666666654444333
No 424
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.13 E-value=9.8e-06 Score=64.78 Aligned_cols=140 Identities=31% Similarity=0.434 Sum_probs=96.4
Q ss_pred HHHHHHhhcCChHHHHHHHH---hhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeC-C-eeeEe
Q 026720 50 ALVEMYSKCGHVEKAFKVFN---LMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSK-G-VIKIG 123 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~---~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~-~-~~~~~ 123 (234)
.++..|+..+.+.+...... .+.......+... +.++. ++|..+++|++++|.++++.. . ..++.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~H~~~~~hrd~kp~nil~~~~~~~~~l~ 144 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALE---------YLHSKGIIHRDIKPENILLDRDGRVVKLI 144 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHH---------HHHhCCeeccCCCHHHeeecCCCCeEEEe
Confidence 46666777777762222111 2222333334333 44433 788888999999999999953 3 58999
Q ss_pred eccccccccCCC-------CCCCcccCcccccccccccc--cCCCCcchHHHHHHHHHHHHhCCCCCCCCCh---HHHHH
Q 026720 124 DLGMVKEIDSNL-------PCTDYVTTRWYRGPEVLLFS--EIYGPEVDKWAMGAIMFEMLSFGILFPGKSS---ADQIY 191 (234)
Q Consensus 124 ~~~~a~~~~~~~-------~~~~~~~~~~~~~pe~~~~~--~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~---~~~~~ 191 (234)
+||.+....... ......++..|.+||...+. ..++...|+|++|+.+++++.+..||..... .....
T Consensus 145 dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~ 224 (384)
T COG0515 145 DFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL 224 (384)
T ss_pred ccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH
Confidence 999988554332 23556788999999998753 4678999999999999999999999887764 44444
Q ss_pred HHHHhhC
Q 026720 192 KICQLIG 198 (234)
Q Consensus 192 ~i~~~~~ 198 (234)
.......
T Consensus 225 ~~~~~~~ 231 (384)
T COG0515 225 KIILELP 231 (384)
T ss_pred HHHHhcC
Confidence 5444444
No 425
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.10 E-value=5.2e-06 Score=68.76 Aligned_cols=78 Identities=36% Similarity=0.543 Sum_probs=60.2
Q ss_pred CeeeEeeccccccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCC---C---ChHHHHH
Q 026720 118 GVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPG---K---SSADQIY 191 (234)
Q Consensus 118 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~---~---~~~~~~~ 191 (234)
.-+++.|||.|-+++.. ...-+-++-|++||++.+.+ |++-.||||.+|+++|+++|..+|.- . .+.+-+.
T Consensus 391 i~vKIaDlGNACW~~kh--FT~DIQTRQYRapEVllGsg-Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA 467 (590)
T KOG1290|consen 391 IRVKIADLGNACWVHKH--FTEDIQTRQYRAPEVLLGSG-YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA 467 (590)
T ss_pred eeEEEeeccchhhhhhh--hchhhhhhhccCcceeecCC-CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence 45789999999988763 33446788999999999665 89999999999999999999999972 1 2444555
Q ss_pred HHHHhhC
Q 026720 192 KICQLIG 198 (234)
Q Consensus 192 ~i~~~~~ 198 (234)
.|.+-.|
T Consensus 468 ~i~ELLG 474 (590)
T KOG1290|consen 468 LIMELLG 474 (590)
T ss_pred HHHHHHh
Confidence 5555444
No 426
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.07 E-value=2.9e-06 Score=65.49 Aligned_cols=130 Identities=23% Similarity=0.438 Sum_probs=81.4
Q ss_pred HHHHHhhcCChHHHHHHHHhhccCcc-ccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-e--CCeeeEeecc
Q 026720 51 LVEMYSKCGHVEKAFKVFNLMREKNL-QSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-S--KGVIKIGDLG 126 (234)
Q Consensus 51 li~~~~~~g~~~~a~~~~~~m~~~~~-~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~--~~~~~~~~~~ 126 (234)
.+.+|+-.|++.+...- ..+-+-+. .....+.++.. ++|+..++|++++.+|+++ . .--.+++|||
T Consensus 99 F~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~---------fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIE---------FMHSKNLVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred EeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHH---------HhhccchhhcccccceEEEecCCccEEEeeecc
Confidence 34556666666654321 00111111 12344566666 7899999999999999988 2 2357899999
Q ss_pred ccccccCCCCCCCcccCcccccccccc----cccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 026720 127 MVKEIDSNLPCTDYVTTRWYRGPEVLL----FSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYK 192 (234)
Q Consensus 127 ~a~~~~~~~~~~~~~~~~~~~~pe~~~----~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~ 192 (234)
.............. ...|.+||... ..-..+...|+|.+|++++..++|..|+......+.-+.
T Consensus 169 ~t~k~g~tV~~~~~--~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 169 LTRKVGTTVKYLEY--VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred cccccCceehhhhh--hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 88876543222222 22355566531 111246889999999999999999999985544444333
No 427
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.06 E-value=6.5e-06 Score=74.41 Aligned_cols=167 Identities=18% Similarity=0.264 Sum_probs=102.9
Q ss_pred HHHHHHHHhhcCChHHH-HHHHHhhccCccccHHHH--HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEe
Q 026720 48 GTALVEMYSKCGHVEKA-FKVFNLMREKNLQSWTIM--ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIG 123 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a-~~~~~~m~~~~~~~~~~~--i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~ 123 (234)
+.+||..|.++..+|.. .+-|-..-+ ..|.+. +.|+. ..|..++.|.|+|..|+++. -+.+.+.
T Consensus 95 AAylvRqyvkhnLyDRlSTRPFL~~iE---KkWiaFQLL~al~---------qcH~~gVcHGDIKsENILiTSWNW~~Lt 162 (1431)
T KOG1240|consen 95 AAYLVRQYVKHNLYDRLSTRPFLVLIE---KKWIAFQLLKALS---------QCHKLGVCHGDIKSENILITSWNWLYLT 162 (1431)
T ss_pred HHHHHHHHHhhhhhhhhccchHHHHHH---HHHHHHHHHHHHH---------HHHHcCccccccccceEEEeeechhhhh
Confidence 46788888888776654 111211111 245443 77887 88999999999999999994 3456677
Q ss_pred eccccccccCCC--C--C----CCcccCccccccccccccc----------CCCCcchHHHHHHHHHHHHh-CCCCCCC-
Q 026720 124 DLGMVKEIDSNL--P--C----TDYVTTRWYRGPEVLLFSE----------IYGPEVDKWAMGAIMFEMLS-FGILFPG- 183 (234)
Q Consensus 124 ~~~~a~~~~~~~--~--~----~~~~~~~~~~~pe~~~~~~----------~~~~~~d~~s~g~~l~e~~~-~~~~f~~- 183 (234)
||..-+...-.- + . -+.--..+|.|||.+.... ......||+|.||++.|++. |.++|.=
T Consensus 163 DFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS 242 (1431)
T KOG1240|consen 163 DFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS 242 (1431)
T ss_pred cccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH
Confidence 776554431100 0 0 0111234699999986422 13578999999999999986 6788851
Q ss_pred ------CChHHHHHHHHHhhCCCCCCCCcchhhhhhhhccccCCCCCccccccCCC
Q 026720 184 ------KSSADQIYKICQLIGSPTKDSWPLGIQLASNLNWKLPQMGGVNLLAVMPS 233 (234)
Q Consensus 184 ------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (234)
.+..+...++.+++.. ..++.+.......++.+|.+.++++++
T Consensus 243 QL~aYr~~~~~~~e~~Le~Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 243 QLLAYRSGNADDPEQLLEKIED-------VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHhHhccCccCHHHHHHhCcC-------ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0111222222222221 245566666677788888888887654
No 428
>PF13812 PPR_3: Pentatricopeptide repeat domain
Probab=98.03 E-value=3.4e-06 Score=44.12 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=16.7
Q ss_pred ccHHHHHHHHHhcCCchhhhHhhhcccccCCcCC
Q 026720 77 QSWTIMISGLADNSRGNDAISLHRQGYFHRDLKP 110 (234)
Q Consensus 77 ~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p 110 (234)
.+||++|.+|++.|+.+.|..+++. |...|++|
T Consensus 2 ~ty~~ll~a~~~~g~~~~a~~~~~~-M~~~gv~P 34 (34)
T PF13812_consen 2 HTYNALLRACAKAGDPDAALQLFDE-MKEQGVKP 34 (34)
T ss_pred cHHHHHHHHHHHCCCHHHHHHHHHH-HHHhCCCC
Confidence 3455555555555555555555555 33344444
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.01 E-value=4e-06 Score=69.94 Aligned_cols=119 Identities=29% Similarity=0.423 Sum_probs=84.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
-.+.+-+|+.+.+++-++--+. ...-++..++.-+-+.+...+. .+.+|++++|.++.+. +...++++|++
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~---~e~~s~s~~~~~~~q~~~~~~y-----k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRT---GEERSLSLMLDIFKQIAPAVEY-----KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCc---ccccchhHHHHHHHhhccchhh-----ccchhhhccccccccccchhhhhhhhhh
Confidence 4455556665655554221111 1334677777777777776553 4478899999999883 44578999998
Q ss_pred cccccCCC-------CCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHh
Q 026720 128 VKEIDSNL-------PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLS 176 (234)
Q Consensus 128 a~~~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~ 176 (234)
.......- .....+++.+|++||-+. +..|+..+|+|++|.+++|++.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~-g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR-GQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHh-hhhhhhhcchhhHHHHHHHHHH
Confidence 77654322 234467889999999998 5679999999999999999987
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=97.92 E-value=2.1e-05 Score=66.37 Aligned_cols=172 Identities=21% Similarity=0.286 Sum_probs=105.4
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHH---HHHHHHhcCCchhhhHhhhccc-ccCCcCCCcEEe-eCCeeeEee
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI---MISGLADNSRGNDAISLHRQGY-FHRDLKPSNLLV-SKGVIKIGD 124 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~---~i~~~~~~g~~~~a~~l~~~~~-~~~~l~p~~~~~-~~~~~~~~~ 124 (234)
+.|..||.+|.+.+.... +.+.....+.+.. ++.|+. ++|...+ .|..++..+-+. .....++.+
T Consensus 23 ~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~---------ylh~s~i~~hg~l~s~nClvd~~w~lklt~ 92 (484)
T KOG1023|consen 23 IVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLA---------YLHNSPIGYHGALKSSNCLVDSRWVLKLTD 92 (484)
T ss_pred EEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHH---------HHhcCcceeeeeeccccceeeeeEEEEech
Confidence 356678999999887554 1222111122211 244555 7786544 677777777777 345678888
Q ss_pred ccccccccCC---CCCCCcccCcccccccccccccC------CCCcchHHHHHHHHHHHHhCCCCCCCCC----hHHHHH
Q 026720 125 LGMVKEIDSN---LPCTDYVTTRWYRGPEVLLFSEI------YGPEVDKWAMGAIMFEMLSFGILFPGKS----SADQIY 191 (234)
Q Consensus 125 ~~~a~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~------~~~~~d~~s~g~~l~e~~~~~~~f~~~~----~~~~~~ 191 (234)
+|........ ...........|.+||.+.+... -+...|+||+|++++|++.++.||+... ..+...
T Consensus 93 ~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~ 172 (484)
T KOG1023|consen 93 FGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIIL 172 (484)
T ss_pred hhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHH
Confidence 8876654320 11111123345789999865311 3567899999999999999999999632 234555
Q ss_pred HHHHhhCC----CCCC---CCcchhhhhhhhccccCCCCCccccccCC
Q 026720 192 KICQLIGS----PTKD---SWPLGIQLASNLNWKLPQMGGVNLLAVMP 232 (234)
Q Consensus 192 ~i~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (234)
++.+ .+. |+.. ..+...-.+.+-||.-++..||+|..+-.
T Consensus 173 ~~~~-~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 173 RVKK-GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHh-cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 5444 222 2222 11223444567799999999999987643
No 431
>KOG4422 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.83 E-value=4.5e-05 Score=62.41 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=37.4
Q ss_pred CccCCCCCCeehHHHHHHHhcCchhhhhHh----HHHHHHHHhccchhHHHHHHHHHHHhhcCCh
Q 026720 1 MKLANENPNSVTLVSLVSACTGLINVRAGE----SIHSYAVVNGLELDVAIGTALVEMYSKCGHV 61 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~ 61 (234)
|....+.||..|||++|++.++.|+++.|+ ++..+|++-|++|...+|-.+|.-+++-++-
T Consensus 264 Misqkm~Pnl~TfNalL~c~akfg~F~~ar~aalqil~EmKeiGVePsLsSyh~iik~f~re~dp 328 (625)
T KOG4422|consen 264 MISQKMTPNLFTFNALLSCAAKFGKFEDARKAALQILGEMKEIGVEPSLSSYHLIIKNFKRESDP 328 (625)
T ss_pred HHHhhcCCchHhHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhcccCCc
Confidence 334556666666666666666666555433 4556666666666666666666666665543
No 432
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.80 E-value=0.00015 Score=59.12 Aligned_cols=129 Identities=23% Similarity=0.287 Sum_probs=79.2
Q ss_pred HhhhcccccCCcCCCcEEee---CC--eeeEeeccccc--cccC-CCCC----CCcccCccccccccccccc------CC
Q 026720 97 SLHRQGYFHRDLKPSNLLVS---KG--VIKIGDLGMVK--EIDS-NLPC----TDYVTTRWYRGPEVLLFSE------IY 158 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~---~~--~~~~~~~~~a~--~~~~-~~~~----~~~~~~~~~~~pe~~~~~~------~~ 158 (234)
+++++++.|+|++.||+++. +. ...+.|||=+. ..+. ..+. .+.-+.-..+|||+.+..+ +|
T Consensus 356 hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny 435 (598)
T KOG4158|consen 356 HLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNY 435 (598)
T ss_pred HHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeecc
Confidence 88999999999999999983 22 34566776433 2211 1111 1122334578999976443 23
Q ss_pred CCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCCCC-CCCCcchhhhhhhhccccCCCCCcc
Q 026720 159 GPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGSPT-KDSWPLGIQLASNLNWKLPQMGGVN 226 (234)
Q Consensus 159 ~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (234)
.+.|.|+.|.+.||++...-||.+.+....-.+-+++-.-|. +...+-..+.+..-..+.++-+|++
T Consensus 436 -~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvs 503 (598)
T KOG4158|consen 436 -EKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVS 503 (598)
T ss_pred -chhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCC
Confidence 678999999999999999999998765554444454433332 3444444444443333444444443
No 433
>KOG4318 consensus Bicoid mRNA stability factor [RNA processing and modification]
Probab=97.75 E-value=1.3e-05 Score=70.66 Aligned_cols=85 Identities=16% Similarity=0.169 Sum_probs=76.7
Q ss_pred ccCCCCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHHH
Q 026720 2 KLANENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI 81 (234)
Q Consensus 2 ~~~g~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~ 81 (234)
...|+.||.+||.++|.-||.-|+.+.|- +|..|.-..+.-...+++.+|.+-.++++.+.+. ++..-+|+.
T Consensus 17 e~~gi~PnRvtyqsLiarYc~~gdieaat-if~fm~~ksLpv~e~vf~~lv~sh~~And~Enpk-------ep~aDtyt~ 88 (1088)
T KOG4318|consen 17 EISGILPNRVTYQSLIARYCTKGDIEAAT-IFPFMEIKSLPVREGVFRGLVASHKEANDAENPK-------EPLADTYTN 88 (1088)
T ss_pred HHhcCCCchhhHHHHHHHHcccCCCcccc-chhhhhcccccccchhHHHHHhcccccccccCCC-------CCchhHHHH
Confidence 45799999999999999999999999888 9999988888889999999999999999998874 566779999
Q ss_pred HHHHHHhcCCchh
Q 026720 82 MISGLADNSRGND 94 (234)
Q Consensus 82 ~i~~~~~~g~~~~ 94 (234)
++.+|.+.|+...
T Consensus 89 Ll~ayr~hGDli~ 101 (1088)
T KOG4318|consen 89 LLKAYRIHGDLIL 101 (1088)
T ss_pred HHHHHHhccchHH
Confidence 9999999999754
No 434
>KOG4422 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.71 E-value=8.5e-05 Score=60.86 Aligned_cols=100 Identities=13% Similarity=0.042 Sum_probs=52.0
Q ss_pred CeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhc----cCccccHHHHHH
Q 026720 9 NSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMR----EKNLQSWTIMIS 84 (234)
Q Consensus 9 ~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~----~~~~~~~~~~i~ 84 (234)
+.-|+++||.+.|+....+.|.+++.+-.......+..+||.+|..-.-. ..+++..+|. .||+.|+|+++.
T Consensus 206 T~et~s~mI~Gl~K~~~~ERA~~L~kE~~~~k~kv~~~aFN~lI~~~S~~----~~K~Lv~EMisqkm~Pnl~TfNalL~ 281 (625)
T KOG4422|consen 206 TDETVSIMIAGLCKFSSLERARELYKEHRAAKGKVYREAFNGLIGASSYS----VGKKLVAEMISQKMTPNLFTFNALLS 281 (625)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHhhheeeHHhhhhhhhHHHhh----ccHHHHHHHHHhhcCCchHhHHHHHH
Confidence 34466666666666666666666665555555555555666655432211 1133333343 256666666666
Q ss_pred HHHhcCCchhhhHh----hhcccccCCcCCCcE
Q 026720 85 GLADNSRGNDAISL----HRQGYFHRDLKPSNL 113 (234)
Q Consensus 85 ~~~~~g~~~~a~~l----~~~~~~~~~l~p~~~ 113 (234)
..++.|+++.|..- ..+ |..-|+.|.--
T Consensus 282 c~akfg~F~~ar~aalqil~E-mKeiGVePsLs 313 (625)
T KOG4422|consen 282 CAAKFGKFEDARKAALQILGE-MKEIGVEPSLS 313 (625)
T ss_pred HHHHhcchHHHHHHHHHHHHH-HHHhCCCcchh
Confidence 66666655554432 233 34445555433
No 435
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=97.55 E-value=2.7e-05 Score=69.42 Aligned_cols=111 Identities=27% Similarity=0.325 Sum_probs=75.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEe-eCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV-SKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~-~~~~~~~~~~~ 126 (234)
.+||..|+..|.+.+.+.....+.+..+..|... +.|+. ++|..+++|++++|.|+++ .....++.|||
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~---------yLH~~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALD---------YLHRHGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH---------HHHhCCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 4677888888888877654443333333444333 56666 8898899999999999999 46778999999
Q ss_pred ccccccCCC-CCCCcccCcccccccccccccCCCCcchHHHHH
Q 026720 127 MVKEIDSNL-PCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMG 168 (234)
Q Consensus 127 ~a~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g 168 (234)
.++...... ......+++.|.+|+.......-....++|++|
T Consensus 150 ls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g 192 (669)
T cd05610 150 LSKVTLNRELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLG 192 (669)
T ss_pred CCccccCCcccccccccCccccCccccccCCCCceeeeeeecC
Confidence 998764322 234456777888887654332223445556655
No 436
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.52 E-value=0.00019 Score=65.31 Aligned_cols=120 Identities=20% Similarity=0.247 Sum_probs=88.7
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCcCCCcEEee--------CCe
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS--------KGV 119 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~--------~~~ 119 (234)
+.|+..|...|.+-++..--..|.+--++.+.+. ++..- ++|...|+|.|++|||.++. ..-
T Consensus 769 S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive---------~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVE---------HLHAMGIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred ceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHH---------HHHhcceecccCCcceeEeecccCCCCcccc
Confidence 5688999999999999885555666555666555 55555 89999999999999999883 134
Q ss_pred eeEeecccccccc---CCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCC
Q 026720 120 IKIGDLGMVKEID---SNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFG 178 (234)
Q Consensus 120 ~~~~~~~~a~~~~---~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~ 178 (234)
.++.|||.+--+. ......+...+..+.++|...+ +.|+-.+|.|+++-+++-|+.|+
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g-rpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG-RPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC-CCCchhhhhHHHHHHHHHHHHHH
Confidence 5788998766432 2223334455666777888874 45889999999999998888776
No 437
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.49 E-value=0.0012 Score=53.61 Aligned_cols=92 Identities=25% Similarity=0.378 Sum_probs=67.8
Q ss_pred HhhhcccccCCcCCCcEEeeC------CeeeEeeccccc--cccCCC--------C-CCCcccCcccccccccccccCCC
Q 026720 97 SLHRQGYFHRDLKPSNLLVSK------GVIKIGDLGMVK--EIDSNL--------P-CTDYVTTRWYRGPEVLLFSEIYG 159 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~~------~~~~~~~~~~a~--~~~~~~--------~-~~~~~~~~~~~~pe~~~~~~~~~ 159 (234)
++|+.+.+|+|++|+|+.+.. ....+.|||.++ .....- . .....++..|.++....+.. .+
T Consensus 137 ~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e-~~ 215 (322)
T KOG1164|consen 137 DLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIE-QG 215 (322)
T ss_pred HHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCc-cC
Confidence 789999999999999999942 357889999998 321110 1 12234667788777765433 57
Q ss_pred CcchHHHHHHHHHHHHhCCCCCCCCChHHH
Q 026720 160 PEVDKWAMGAIMFEMLSFGILFPGKSSADQ 189 (234)
Q Consensus 160 ~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~ 189 (234)
..-|+||++-.+.++..|..|+.+......
T Consensus 216 r~DDles~~Y~l~el~~g~LPW~~~~~~~~ 245 (322)
T KOG1164|consen 216 RRDDLESLFYMLLELLKGSLPWEALEMTDL 245 (322)
T ss_pred CchhhhhHHHHHHHHhcCCCCCccccccch
Confidence 889999999999999999999977654333
No 438
>PRK11788 tetratricopeptide repeat protein; Provisional
Probab=97.46 E-value=0.00035 Score=58.09 Aligned_cols=102 Identities=14% Similarity=0.046 Sum_probs=71.7
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--CccccHHHHHHHHHh
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--KNLQSWTIMISGLAD 88 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~~~~~~~~~i~~~~~ 88 (234)
.++..+...+.+.|+.++|.+++..+.+........+++.+...|++.|..++|...++.+.+ |+...++.+...+.+
T Consensus 215 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~la~~~~~ 294 (389)
T PRK11788 215 RASILLGDLALAQGDYAAAIEALERVEEQDPEYLSEVLPKLMECYQALGDEAEGLEFLRRALEEYPGADLLLALAQLLEE 294 (389)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 355566677788888888888888887654333345677788888888888888888777653 555556667778888
Q ss_pred cCCchhhhHhhhcccccCCcCCCcEEe
Q 026720 89 NSRGNDAISLHRQGYFHRDLKPSNLLV 115 (234)
Q Consensus 89 ~g~~~~a~~l~~~~~~~~~l~p~~~~~ 115 (234)
.|+.++|+.++... +. ..|+...+
T Consensus 295 ~g~~~~A~~~l~~~-l~--~~P~~~~~ 318 (389)
T PRK11788 295 QEGPEAAQALLREQ-LR--RHPSLRGF 318 (389)
T ss_pred hCCHHHHHHHHHHH-HH--hCcCHHHH
Confidence 88888888888763 32 24665444
No 439
>PRK11788 tetratricopeptide repeat protein; Provisional
Probab=97.26 E-value=0.0017 Score=54.03 Aligned_cols=117 Identities=9% Similarity=0.066 Sum_probs=86.3
Q ss_pred HHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--Cc--cccHHHHHHHHHh
Q 026720 13 LVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--KN--LQSWTIMISGLAD 88 (234)
Q Consensus 13 ~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~~--~~~~~~~i~~~~~ 88 (234)
+..+...+.+.++.++|...+.++.+... .+...+..+...|.+.|+.++|.+.++++.+ ++ ...++.+..+|.+
T Consensus 183 ~~~la~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~l~~~~~~ 261 (389)
T PRK11788 183 YCELAQQALARGDLDAARALLKKALAADP-QCVRASILLGDLALAQGDYAAAIEALERVEEQDPEYLSEVLPKLMECYQA 261 (389)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHhHCc-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHH
Confidence 45566678889999999999999987542 2455778888999999999999999999774 33 3467888999999
Q ss_pred cCCchhhhHhhhcccccCCcCCCcEEe---eCCeeeEeeccccccccC
Q 026720 89 NSRGNDAISLHRQGYFHRDLKPSNLLV---SKGVIKIGDLGMVKEIDS 133 (234)
Q Consensus 89 ~g~~~~a~~l~~~~~~~~~l~p~~~~~---~~~~~~~~~~~~a~~~~~ 133 (234)
.|+.++|...+.. +.. ..|+...+ ...+.+.+++..+.....
T Consensus 262 ~g~~~~A~~~l~~-~~~--~~p~~~~~~~la~~~~~~g~~~~A~~~l~ 306 (389)
T PRK11788 262 LGDEAEGLEFLRR-ALE--EYPGADLLLALAQLLEEQEGPEAAQALLR 306 (389)
T ss_pred cCCHHHHHHHHHH-HHH--hCCCchHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999887 333 24554322 123445566666666554
No 440
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.79 E-value=0.0071 Score=48.58 Aligned_cols=101 Identities=27% Similarity=0.374 Sum_probs=72.0
Q ss_pred HhhhcccccCCcCCCcEEee------CCeeeEeeccccccccCC-----CC---CCCcccCcccccccccccccCCCCcc
Q 026720 97 SLHRQGYFHRDLKPSNLLVS------KGVIKIGDLGMVKEIDSN-----LP---CTDYVTTRWYRGPEVLLFSEIYGPEV 162 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~------~~~~~~~~~~~a~~~~~~-----~~---~~~~~~~~~~~~pe~~~~~~~~~~~~ 162 (234)
++|...++.+|++|+|.++. .....+.|||.|++.... .+ .....++-.|++.....+.+ -+..-
T Consensus 139 ~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrE-QSRRD 217 (449)
T KOG1165|consen 139 YVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGRE-QSRRD 217 (449)
T ss_pred HHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccch-hhhhh
Confidence 67877799999999999993 256789999999976331 11 12345566677776665433 46778
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhhCC
Q 026720 163 DKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLIGS 199 (234)
Q Consensus 163 d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~~~ 199 (234)
|+=|+|=++...+.|..|+.|......- .-.+++|.
T Consensus 218 DLEaLGHvFmYFLRGsLPWQGLKA~tnK-~kYeKIGe 253 (449)
T KOG1165|consen 218 DLEALGHVFMYFLRGSLPWQGLKADTNK-EKYEKIGE 253 (449)
T ss_pred hHHHhhhhhhhhccCCCccccccCcchH-HHHHHhcc
Confidence 9999999999999999999987554332 23344443
No 441
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.76 E-value=0.00041 Score=60.92 Aligned_cols=174 Identities=26% Similarity=0.336 Sum_probs=110.0
Q ss_pred HHHHHHHhhcCChHHHHHHHH--hhccCccccHHHH-HHHHHhcCCchhhhHhh-hcccccCCcCCCcEEe-eCC-eeeE
Q 026720 49 TALVEMYSKCGHVEKAFKVFN--LMREKNLQSWTIM-ISGLADNSRGNDAISLH-RQGYFHRDLKPSNLLV-SKG-VIKI 122 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~--~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~-~~~~~~~~l~p~~~~~-~~~-~~~~ 122 (234)
..++..|+..|.+-+-..-.+ .++.++...|... .+++. ++| .....|++++|++.++ .+. ..+.
T Consensus 96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~---------~~H~~~~~~h~~ikP~n~~l~~s~~~l~~ 166 (601)
T KOG0590|consen 96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLS---------YLHPENGVTHRDIKPSNSLLDESGSALKI 166 (601)
T ss_pred cccccCcccccccccccccCCccCCCCcchhhhhhhhccCcc---------ccCcccccccCCCCCccchhccCCCcccC
Confidence 344555555554433221111 2334455555555 55555 677 7778999999998877 344 5788
Q ss_pred eeccccccccC-C---CCCCCccc-CcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhh
Q 026720 123 GDLGMVKEIDS-N---LPCTDYVT-TRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQIYKICQLI 197 (234)
Q Consensus 123 ~~~~~a~~~~~-~---~~~~~~~~-~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~~~i~~~~ 197 (234)
.+++.|..... . .......+ ++.|.+||...+........|+||.|+++..++.|..|.......+.-+.-+...
T Consensus 167 ~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~ 246 (601)
T KOG0590|consen 167 ADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSN 246 (601)
T ss_pred CCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccc
Confidence 88888887654 1 12233455 8889999999864456789999999999999999998877544443222211111
Q ss_pred -CCCCCCCCcchhhhhhhhccccC---CCCCccccccC
Q 026720 198 -GSPTKDSWPLGIQLASNLNWKLP---QMGGVNLLAVM 231 (234)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 231 (234)
+......|+..-....++.++.. +-.|.+.+++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 23356778766666777766655 56666666553
No 442
>PRK12274 serine/threonine protein kinase; Provisional
Probab=96.51 E-value=0.0065 Score=46.08 Aligned_cols=120 Identities=19% Similarity=0.166 Sum_probs=69.5
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCc-CCCcEEee-CCeeeEeeccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDL-KPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l-~p~~~~~~-~~~~~~~~~~~ 127 (234)
+++..|...+.+.+. .+..+...+..++.++. ++|..+++|+|+ +|.|+++. .+..++.|||.
T Consensus 74 ~lvmeyI~G~~L~~~------~~~~~~~~~~qi~~~L~---------~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~ 138 (218)
T PRK12274 74 HLDRSYLAGAAMYQR------PPRGDLAYFRAARRLLQ---------QLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQL 138 (218)
T ss_pred EEEEeeecCccHHhh------hhhhhHHHHHHHHHHHH---------HHHHCcCccCCCCCcceEEEcCCCCEEEEECCC
Confidence 566666665555432 11122222333355555 789999999999 79999994 56688999999
Q ss_pred cccccCCCCC------CCc--------ccCcccccccccccccCCCCcchHH-HHHHHHHHHHhCCCCCCCC
Q 026720 128 VKEIDSNLPC------TDY--------VTTRWYRGPEVLLFSEIYGPEVDKW-AMGAIMFEMLSFGILFPGK 184 (234)
Q Consensus 128 a~~~~~~~~~------~~~--------~~~~~~~~pe~~~~~~~~~~~~d~~-s~g~~l~e~~~~~~~f~~~ 184 (234)
+......... .+. ...+.+..|+-.......+-...+| +.|+-++.++++..+.-++
T Consensus 139 A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 139 AVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred ceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 9865543211 000 0122334443322111123334455 5899999999998766543
No 443
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=95.82 E-value=0.0051 Score=45.97 Aligned_cols=76 Identities=20% Similarity=0.190 Sum_probs=48.9
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccH-HHHHHHHHhcCCchhhhHhhh-cccccCCcCCCcEEeeCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSW-TIMISGLADNSRGNDAISLHR-QGYFHRDLKPSNLLVSKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~-~~~i~~~~~~g~~~~a~~l~~-~~~~~~~l~p~~~~~~~~~~~~~~~~ 126 (234)
+.|+.+|+..+.+..-...-..++..+...+ ..++.++. ++|. .+++|+|++|.|+++.....++.|||
T Consensus 92 ~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~---------~lH~~~givHrDlkP~NIll~~~~~~liDFG 162 (190)
T cd05145 92 NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMR---------RLYQEAGLVHGDLSEYNILYHDGKPYIIDVS 162 (190)
T ss_pred CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHH---------HHHHhCCEecCCCChhhEEEECCCEEEEEcc
Confidence 4688899876643221100011222233222 23356666 8888 89999999999999976678899999
Q ss_pred ccccccC
Q 026720 127 MVKEIDS 133 (234)
Q Consensus 127 ~a~~~~~ 133 (234)
.+..+..
T Consensus 163 ~a~~~~~ 169 (190)
T cd05145 163 QAVELDH 169 (190)
T ss_pred cceecCC
Confidence 8876543
No 444
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=95.81 E-value=0.0031 Score=47.22 Aligned_cols=74 Identities=20% Similarity=0.127 Sum_probs=48.0
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHH-HHHHHHhcCCchhhhHh-hhcccccCCcCCCcEEeeCCeeeEeecc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTI-MISGLADNSRGNDAISL-HRQGYFHRDLKPSNLLVSKGVIKIGDLG 126 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~-~i~~~~~~g~~~~a~~l-~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 126 (234)
..|+.+|+..+.+.....--..++...+..+.. ++.++. ++ |..+++|+|++|.|+++.....++.|||
T Consensus 92 ~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~---------~l~H~~giiHrDlkP~NIli~~~~v~LiDFG 162 (190)
T cd05147 92 HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMR---------ILYQDCRLVHADLSEYNLLYHDGKLYIIDVS 162 (190)
T ss_pred CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHH---------HHHHhCCcccCCCCHHHEEEECCcEEEEEcc
Confidence 368888888765543211111122223333333 355555 67 5778999999999999976778999999
Q ss_pred ccccc
Q 026720 127 MVKEI 131 (234)
Q Consensus 127 ~a~~~ 131 (234)
.+...
T Consensus 163 ~a~~~ 167 (190)
T cd05147 163 QSVEH 167 (190)
T ss_pred ccccC
Confidence 87654
No 445
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=95.79 E-value=0.029 Score=43.20 Aligned_cols=122 Identities=21% Similarity=0.316 Sum_probs=77.5
Q ss_pred HhhhcccccCCcCCCcEEee----CCeeeEeeccccccccCCC-----C---CCCcccCcccccccccccccCCCCcchH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSNL-----P---CTDYVTTRWYRGPEVLLFSEIYGPEVDK 164 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~----~~~~~~~~~~~a~~~~~~~-----~---~~~~~~~~~~~~pe~~~~~~~~~~~~d~ 164 (234)
++|....+|+|++|||.+.. ..-..+.|||+++....-- + -....++-.|.+.....+.. -+..-|+
T Consensus 126 yvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~e-qSRRDDm 204 (341)
T KOG1163|consen 126 YVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIE-QSRRDDM 204 (341)
T ss_pred HHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhh-hhhhhhh
Confidence 67877899999999999983 3345789999999754311 1 11233444454444333221 2456688
Q ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHH---HHH-hhCCCCC---CCCcchhhhhhhhcccc
Q 026720 165 WAMGAIMFEMLSFGILFPGKSSADQIYK---ICQ-LIGSPTK---DSWPLGIQLASNLNWKL 219 (234)
Q Consensus 165 ~s~g~~l~e~~~~~~~f~~~~~~~~~~~---i~~-~~~~~~~---~~~~~~~~~~~~~~~~~ 219 (234)
=|.|-++...-.|..|+.|.......++ |.+ ++..|.. ..++.++....++|..+
T Consensus 205 eSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L 266 (341)
T KOG1163|consen 205 ESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGL 266 (341)
T ss_pred hhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhc
Confidence 8999999999999999999876665554 332 3333333 34555555666666644
No 446
>PF10037 MRP-S27: Mitochondrial 28S ribosomal protein S27; InterPro: IPR019266 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry represents a family of small ribosomal proteins possessing one of three conserved sequence blocks found in proteins that stimulate the dissociation of guanine nucleotides from G-proteins. This leaves open the possibility that they may be functional partners of GTP-binding ribosomal proteins [].
Probab=95.65 E-value=0.038 Score=46.43 Aligned_cols=61 Identities=23% Similarity=0.127 Sum_probs=39.1
Q ss_pred hHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhc
Q 026720 12 TLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMR 72 (234)
Q Consensus 12 t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~ 72 (234)
|..++|+-|-..+..+++..+...=+..|+-||.+++|.|++.|.+.|+...|.++...|-
T Consensus 105 t~ha~vR~~l~~~~~~~~l~~L~n~~~yGiF~D~~s~n~Lmd~fl~~~~~~~A~~V~~~~~ 165 (429)
T PF10037_consen 105 THHALVRQCLELGAEDELLELLKNRLQYGIFPDNFSFNLLMDHFLKKGNYKSAAKVATEMM 165 (429)
T ss_pred cHHHHHHHHHhcCCHHHHHHHHhChhhcccCCChhhHHHHHHHHhhcccHHHHHHHHHHHH
Confidence 4456666666666666666666665566666666666666666666666666666655543
No 447
>PF06239 ECSIT: Evolutionarily conserved signalling intermediate in Toll pathway; InterPro: IPR010418 Activation of NF-kappaB as a consequence of signalling through the Toll and IL-1 receptors is a major element of innate immune responses. ECSIT plays an important role in signalling to NF-kappaB, functioning as the intermediate in the signalling pathways between TRAF-6 and MEKK-1 [].
Probab=95.58 E-value=0.024 Score=42.76 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=51.0
Q ss_pred CccCCCCCCeehHHHHHHHhcCc----------------hhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCCh
Q 026720 1 MKLANENPNSVTLVSLVSACTGL----------------INVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHV 61 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~----------------~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~ 61 (234)
|.+.|+.-|..+|+.||+.+=+. ..-+.|..+..+|...|+.||..++..|++-|++.+.-
T Consensus 78 M~efgv~kDL~~Y~~LLDvFPKg~fvp~n~fQ~~F~hyp~Qq~c~i~lL~qME~~gV~Pd~Et~~~ll~iFG~~s~p 154 (228)
T PF06239_consen 78 MDEFGVEKDLEVYKALLDVFPKGKFVPRNFFQAEFMHYPRQQECAIDLLEQMENNGVMPDKETEQMLLNIFGRKSHP 154 (228)
T ss_pred HHHcCCcccHHHHHHHHHhCCCCCcccccHHHHHhccCcHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHhccccHH
Confidence 56789999999999999976542 23357888999999999999999999999999888763
No 448
>PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A.
Probab=95.43 E-value=0.078 Score=33.68 Aligned_cols=79 Identities=14% Similarity=0.078 Sum_probs=56.2
Q ss_pred chhhhhHhHHHHHHHHhccc-hhHHHHHHHHHHHhhcCChHHHHHHHHhhc--cCccccHHHHHHHHHhcCCchhhhHhh
Q 026720 23 LINVRAGESIHSYAVVNGLE-LDVAIGTALVEMYSKCGHVEKAFKVFNLMR--EKNLQSWTIMISGLADNSRGNDAISLH 99 (234)
Q Consensus 23 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~li~~~~~~g~~~~a~~~~~~m~--~~~~~~~~~~i~~~~~~g~~~~a~~l~ 99 (234)
.++.+.|..++..+++.... ++...+-.+-..|.+.|+.++|..+++... ..+....-..-.++.+.|+.++|+..+
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~l 81 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQKLKLDPSNPDIHYLLARCLLKLGKYEEAIKAL 81 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHCHTHHHCHHHHHHHHHHHHHHTT-HHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 36788899999999987663 355555668999999999999999997732 123222222366688899999999887
Q ss_pred hc
Q 026720 100 RQ 101 (234)
Q Consensus 100 ~~ 101 (234)
..
T Consensus 82 ~~ 83 (84)
T PF12895_consen 82 EK 83 (84)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 449
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Probab=95.43 E-value=0.083 Score=48.36 Aligned_cols=90 Identities=13% Similarity=0.010 Sum_probs=37.7
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHH
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLA 87 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~ 87 (234)
.+|..+...+.+.++.++|...+..+++... .+...+..+...|.+.|+.++|...++.+.+ .+..+|+.+...+.
T Consensus 602 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 680 (899)
T TIGR02917 602 EAWLMLGRAQLAAGDLNKAVSSFKKLLALQP-DSALALLLLADAYAVMKNYAKAITSLKRALELKPDNTEAQIGLAQLLL 680 (899)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 3344444444444444444444444443221 1233344444444444444444444444322 12334444444444
Q ss_pred hcCCchhhhHhhhc
Q 026720 88 DNSRGNDAISLHRQ 101 (234)
Q Consensus 88 ~~g~~~~a~~l~~~ 101 (234)
..|+.++|..++..
T Consensus 681 ~~~~~~~A~~~~~~ 694 (899)
T TIGR02917 681 AAKRTESAKKIAKS 694 (899)
T ss_pred HcCCHHHHHHHHHH
Confidence 44444444444433
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=95.27 E-value=0.098 Score=43.82 Aligned_cols=88 Identities=17% Similarity=0.182 Sum_probs=60.0
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeeccccccccCCCCCCCcccCcccccccccc-c---ccCCCCcchHHHHHHHH
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSNLPCTDYVTTRWYRGPEVLL-F---SEIYGPEVDKWAMGAIM 171 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~pe~~~-~---~~~~~~~~d~~s~g~~l 171 (234)
.+|..+-.-.|+++++++.+ +....+.+-..-..-.......+.+++..|++||.-+ . +-......|.+++|+++
T Consensus 132 ~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLi 211 (637)
T COG4248 132 TLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLI 211 (637)
T ss_pred HHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHH
Confidence 67888777789999999984 4455555433211111222334567888899999854 1 11135778999999999
Q ss_pred HHHHhC-CCCCCCC
Q 026720 172 FEMLSF-GILFPGK 184 (234)
Q Consensus 172 ~e~~~~-~~~f~~~ 184 (234)
.+++.| +.||+|.
T Consensus 212 F~lL~ggrHPysGI 225 (637)
T COG4248 212 FHLLFGGRHPYSGI 225 (637)
T ss_pred HHHHhcCCCCCCcc
Confidence 999886 7999875
No 451
>PRK09188 serine/threonine protein kinase; Provisional
Probab=95.24 E-value=0.039 Score=45.62 Aligned_cols=89 Identities=22% Similarity=0.322 Sum_probs=58.3
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHH-HHHHHhcCCchhhhHhhhcccccCCc-CCCcEEe-eCCeeeEeec
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIM-ISGLADNSRGNDAISLHRQGYFHRDL-KPSNLLV-SKGVIKIGDL 125 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~-i~~~~~~g~~~~a~~l~~~~~~~~~l-~p~~~~~-~~~~~~~~~~ 125 (234)
..|+..|+..+.+... . +. ....|... +.++. ++|..+++|+|+ +|.|+++ .....++.||
T Consensus 93 ~~LVmE~~~G~~L~~~----~--~~-~~~~~~~~i~~aL~---------~lH~~gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 93 DGLVRGWTEGVPLHLA----R--PH-GDPAWFRSAHRALR---------DLHRAGITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred cEEEEEccCCCCHHHh----C--cc-chHHHHHHHHHHHH---------HHHHCCCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 4678888887777521 1 11 11233333 55666 889999999999 9999999 3556899999
Q ss_pred cccccccCCCCC---------CCcccCcccccccccc
Q 026720 126 GMVKEIDSNLPC---------TDYVTTRWYRGPEVLL 153 (234)
Q Consensus 126 ~~a~~~~~~~~~---------~~~~~~~~~~~pe~~~ 153 (234)
|.+..+...... ....+...|.+||.+.
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 999976543211 1233444567787763
No 452
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=95.23 E-value=0.011 Score=45.46 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=60.5
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeeccc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGM 127 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~ 127 (234)
..|+.+|+....+.+.... . ......+..++. .+|..+++|+|++|.|+++. .+ ..+.||+.
T Consensus 118 ~~lvmEyi~G~tL~~~~~~----~---~~~~~~i~~~l~---------~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~ 180 (232)
T PRK10359 118 YIMLIEYIEGVELNDMPEI----S---EDVKAKIKASIE---------SLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSG 180 (232)
T ss_pred eEEEEEEECCccHHHhhhc----c---HHHHHHHHHHHH---------HHHHcCCccCCCChHHEEEeCCC-EEEEECCC
Confidence 4567788887777665211 1 111223344444 78999999999999999994 45 88999987
Q ss_pred cccccCCCCCCCcccCcccccccccccccCCCCcchHHHHHHHHH
Q 026720 128 VKEIDSNLPCTDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMF 172 (234)
Q Consensus 128 a~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~ 172 (234)
........ +.+.+.--+.|+...|+|++|+.+.
T Consensus 181 ~~~~~e~~------------a~d~~vler~y~~~~di~~lg~~~~ 213 (232)
T PRK10359 181 KRCTAQRK------------AKDRIDLERHYGIKNEIKDLGYYLL 213 (232)
T ss_pred cccccchh------------hHHHHHHHhHhcccccccceeEeeh
Confidence 66543211 1122222334678899999987654
No 453
>PRK15359 type III secretion system chaperone protein SscB; Provisional
Probab=95.18 E-value=0.14 Score=36.43 Aligned_cols=88 Identities=9% Similarity=-0.127 Sum_probs=66.2
Q ss_pred HHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHHhc
Q 026720 13 LVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLADN 89 (234)
Q Consensus 13 ~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~~~ 89 (234)
+...-.++...|++++|...+...+.... .+...+..+-..+.+.|+.++|...|+.... .+...|..+-..+.+.
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P-~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQP-WSWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 33444566778888888888888776543 2566778888888888999999888887554 3566777777778888
Q ss_pred CCchhhhHhhhc
Q 026720 90 SRGNDAISLHRQ 101 (234)
Q Consensus 90 g~~~~a~~l~~~ 101 (234)
|+.++|+..+..
T Consensus 106 g~~~eAi~~~~~ 117 (144)
T PRK15359 106 GEPGLAREAFQT 117 (144)
T ss_pred CCHHHHHHHHHH
Confidence 999998888876
No 454
>TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.
Probab=95.16 E-value=0.099 Score=47.85 Aligned_cols=54 Identities=20% Similarity=0.351 Sum_probs=22.3
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHHhcCCchhhhHhhhc
Q 026720 48 GTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLADNSRGNDAISLHRQ 101 (234)
Q Consensus 48 ~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~~~g~~~~a~~l~~~ 101 (234)
+..+...|.+.|+.++|..+++.+.. .+...|..+...+.+.|+.++|+..+..
T Consensus 570 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 626 (899)
T TIGR02917 570 ALALAQYYLGKGQLKKALAILNEAADAAPDSPEAWLMLGRAQLAAGDLNKAVSSFKK 626 (899)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 33344444444444444444443321 1233344444444444444444444433
No 455
>cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C
Probab=95.01 E-value=0.14 Score=31.95 Aligned_cols=88 Identities=15% Similarity=0.070 Sum_probs=67.3
Q ss_pred HHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHHhc
Q 026720 13 LVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLADN 89 (234)
Q Consensus 13 ~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~~~ 89 (234)
+..+-..+...+++++|...+....+... .+..++..+...|...|..++|...++.... .+..+|..+...+...
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (100)
T cd00189 3 LLNLGNLYYKLGDYDEALEYYEKALELDP-DNADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYKL 81 (100)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH
Confidence 34455566678889999999998877543 2346777888889999999999999887543 3445777778888889
Q ss_pred CCchhhhHhhhc
Q 026720 90 SRGNDAISLHRQ 101 (234)
Q Consensus 90 g~~~~a~~l~~~ 101 (234)
|+.++|...+..
T Consensus 82 ~~~~~a~~~~~~ 93 (100)
T cd00189 82 GKYEEALEAYEK 93 (100)
T ss_pred HhHHHHHHHHHH
Confidence 999999988866
No 456
>PF10037 MRP-S27: Mitochondrial 28S ribosomal protein S27; InterPro: IPR019266 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry represents a family of small ribosomal proteins possessing one of three conserved sequence blocks found in proteins that stimulate the dissociation of guanine nucleotides from G-proteins. This leaves open the possibility that they may be functional partners of GTP-binding ribosomal proteins [].
Probab=94.96 E-value=0.12 Score=43.62 Aligned_cols=108 Identities=10% Similarity=0.021 Sum_probs=81.5
Q ss_pred CCCeehHHHHHHHhcCchhhhhHhHHHHHHHHh--ccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc----CccccHH
Q 026720 7 NPNSVTLVSLVSACTGLINVRAGESIHSYAVVN--GLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE----KNLQSWT 80 (234)
Q Consensus 7 ~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~~~~ 80 (234)
..+.+....+++.+.....++++..+.-....+ ....--.|..++|..|-+.|..+++..+...=.. +|-.|+|
T Consensus 63 ~vS~~dld~fvn~~~~~~~~d~~~~~L~k~R~s~~~~~~~~~t~ha~vR~~l~~~~~~~~l~~L~n~~~yGiF~D~~s~n 142 (429)
T PF10037_consen 63 PVSSLDLDIFVNNVESKDDLDEVEDVLYKFRHSPNCSYLLPSTHHALVRQCLELGAEDELLELLKNRLQYGIFPDNFSFN 142 (429)
T ss_pred CCcHHHHHHHHhhcCCHhHHHHHHHHHHHHHcCcccccccCccHHHHHHHHHhcCCHHHHHHHHhChhhcccCCChhhHH
Confidence 446778888999999999998888776665544 2211223445999999999999999988654222 6899999
Q ss_pred HHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEe
Q 026720 81 IMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLV 115 (234)
Q Consensus 81 ~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~ 115 (234)
.++..+.+.|++..|..+...+|.+. ...+..+.
T Consensus 143 ~Lmd~fl~~~~~~~A~~V~~~~~lQe-~~~~~~t~ 176 (429)
T PF10037_consen 143 LLMDHFLKKGNYKSAAKVATEMMLQE-EFDNPSTQ 176 (429)
T ss_pred HHHHHHhhcccHHHHHHHHHHHHHhh-ccCCchHH
Confidence 99999999999999999998866554 33444443
No 457
>PF08579 RPM2: Mitochondrial ribonuclease P subunit (RPM2); InterPro: IPR013888 Ribonuclease P (RNase P) generates mature tRNA molecules by cleaving their 5' ends. Rpm2 is a protein subunit of the yeast mitochondrial RNase P. It has the ability to act as a transcriptional activator in the nucleus, where it plays a role in defining the steady-state levels of mRNAs for some nucleus-encoded mitochondrial components. Rpm2p is also involved in maturation of Rpm1 and in translation of mitochondrial mRNAs [, , ].
Probab=94.90 E-value=0.074 Score=35.87 Aligned_cols=56 Identities=9% Similarity=-0.061 Sum_probs=44.1
Q ss_pred ccCCC-CCCeehHHHHHHHhcCchh--------hhhHhHHHHHHHHhccchhHHHHHHHHHHHhh
Q 026720 2 KLANE-NPNSVTLVSLVSACTGLIN--------VRAGESIHSYAVVNGLELDVAIGTALVEMYSK 57 (234)
Q Consensus 2 ~~~g~-~~~~~t~~~ll~~~~~~~~--------~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~ 57 (234)
++.|+ -|++-+|+.+|.+.++... +-+..-++..|+.+++.|+..+||.+|..+.+
T Consensus 52 kRN~i~lPsv~~Yn~VL~Si~~R~lD~~~ie~kl~~LLtvYqDiL~~~lKP~~etYnivl~~Llk 116 (120)
T PF08579_consen 52 KRNGITLPSVELYNKVLKSIAKRELDSEDIENKLTNLLTVYQDILSNKLKPNDETYNIVLGSLLK 116 (120)
T ss_pred HhcCCCCCcHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 45788 8999999999998776432 22445578888899999999999999988765
No 458
>PF08579 RPM2: Mitochondrial ribonuclease P subunit (RPM2); InterPro: IPR013888 Ribonuclease P (RNase P) generates mature tRNA molecules by cleaving their 5' ends. Rpm2 is a protein subunit of the yeast mitochondrial RNase P. It has the ability to act as a transcriptional activator in the nucleus, where it plays a role in defining the steady-state levels of mRNAs for some nucleus-encoded mitochondrial components. Rpm2p is also involved in maturation of Rpm1 and in translation of mitochondrial mRNAs [, , ].
Probab=94.88 E-value=0.25 Score=33.36 Aligned_cols=75 Identities=12% Similarity=0.171 Sum_probs=56.4
Q ss_pred HHHHHHhcCchhhhhHhHHHHHHHHhcc-chhHHHHHHHHHHHhhcCChH--------HHHHHHHhhc----cCccccHH
Q 026720 14 VSLVSACTGLINVRAGESIHSYAVVNGL-ELDVAIGTALVEMYSKCGHVE--------KAFKVFNLMR----EKNLQSWT 80 (234)
Q Consensus 14 ~~ll~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~li~~~~~~g~~~--------~a~~~~~~m~----~~~~~~~~ 80 (234)
...|..|...+++..-..++.-++++|+ .|++.+||.++...++...-. ++..++..|- .|+--+||
T Consensus 29 i~~I~~~~~~~d~N~I~~lYqslkRN~i~lPsv~~Yn~VL~Si~~R~lD~~~ie~kl~~LLtvYqDiL~~~lKP~~etYn 108 (120)
T PF08579_consen 29 IDNINSCFENEDYNIINPLYQSLKRNGITLPSVELYNKVLKSIAKRELDSEDIENKLTNLLTVYQDILSNKLKPNDETYN 108 (120)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHccccchhHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 3566777777999999999999999999 999999999999998875432 2233444443 36777888
Q ss_pred HHHHHHHh
Q 026720 81 IMISGLAD 88 (234)
Q Consensus 81 ~~i~~~~~ 88 (234)
.+|..+.+
T Consensus 109 ivl~~Llk 116 (120)
T PF08579_consen 109 IVLGSLLK 116 (120)
T ss_pred HHHHHHHH
Confidence 88876653
No 459
>PF12921 ATP13: Mitochondrial ATPase expression; InterPro: IPR024319 ATPase expression protein 2 (also known as ATP13 in some species) is necessary for the expression of subunit 9 of mitochondrial ATPase. The protein has a basic amino terminal signal sequence that is cleaved upon import into mitochondria [].
Probab=94.47 E-value=0.11 Score=35.99 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=55.6
Q ss_pred CeehHHHHHHHhcCchhhhhHhHHHHHH---------------HHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc
Q 026720 9 NSVTLVSLVSACTGLINVRAGESIHSYA---------------VVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE 73 (234)
Q Consensus 9 ~~~t~~~ll~~~~~~~~~~~~~~~~~~~---------------~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 73 (234)
|+.++.++|-++++.|+++..+.+.... ..+.+.|+..+-.+++..|+..|++..|.++.+...+
T Consensus 1 de~~~~~ii~al~r~g~~~~i~~~i~~~WgI~~~~~~~~~~~~~~spl~Pt~~lL~AIv~sf~~n~~i~~al~~vd~fs~ 80 (126)
T PF12921_consen 1 DEELLCNIIYALGRSGQLDSIKSYIKSVWGIDVNGKKKEGDYPPSSPLYPTSRLLIAIVHSFGYNGDIFSALKLVDFFSR 80 (126)
T ss_pred ChHHHHHHHHHHhhcCCHHHHHHHHHHhcCCCCCCccccCccCCCCCCCCCHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 5678999999999999998777655322 1122357788889999999999999999998887654
Q ss_pred C-----ccccHHHHHH
Q 026720 74 K-----NLQSWTIMIS 84 (234)
Q Consensus 74 ~-----~~~~~~~~i~ 84 (234)
. +-..|..++.
T Consensus 81 ~Y~I~i~~~~W~~Ll~ 96 (126)
T PF12921_consen 81 KYPIPIPKEFWRRLLE 96 (126)
T ss_pred HcCCCCCHHHHHHHHH
Confidence 2 2346666643
No 460
>TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.
Probab=94.23 E-value=0.33 Score=33.63 Aligned_cols=88 Identities=8% Similarity=-0.005 Sum_probs=69.6
Q ss_pred HHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHHhc
Q 026720 13 LVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLADN 89 (234)
Q Consensus 13 ~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~~~ 89 (234)
...+...+...++.++|...+......+. .+...+..+-..|.+.|+.++|...++.... .+...|..+-..+.+.
T Consensus 20 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la~~~~~~ 98 (135)
T TIGR02552 20 IYALAYNLYQQGRYDEALKLFQLLAAYDP-YNSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAAECLLAL 98 (135)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHc
Confidence 44556677788999999999999877653 3667788888889999999999998887543 3556666666788899
Q ss_pred CCchhhhHhhhc
Q 026720 90 SRGNDAISLHRQ 101 (234)
Q Consensus 90 g~~~~a~~l~~~ 101 (234)
|+.++|+..+..
T Consensus 99 g~~~~A~~~~~~ 110 (135)
T TIGR02552 99 GEPESALKALDL 110 (135)
T ss_pred CCHHHHHHHHHH
Confidence 999999999876
No 461
>PF06239 ECSIT: Evolutionarily conserved signalling intermediate in Toll pathway; InterPro: IPR010418 Activation of NF-kappaB as a consequence of signalling through the Toll and IL-1 receptors is a major element of innate immune responses. ECSIT plays an important role in signalling to NF-kappaB, functioning as the intermediate in the signalling pathways between TRAF-6 and MEKK-1 [].
Probab=94.16 E-value=0.15 Score=38.60 Aligned_cols=85 Identities=16% Similarity=0.196 Sum_probs=58.8
Q ss_pred CCCeehHHHHHHHhcCc-----hhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCCh-----------------HHH
Q 026720 7 NPNSVTLVSLVSACTGL-----INVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHV-----------------EKA 64 (234)
Q Consensus 7 ~~~~~t~~~ll~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~-----------------~~a 64 (234)
..|-.||..+|+.+.+. |.++-...-...|.+-|++.|..+|+.|++.|=+ |.+ +-|
T Consensus 44 ~k~K~~F~~~V~~f~~~~~~RRGHVeFI~aAL~~M~efgv~kDL~~Y~~LLDvFPK-g~fvp~n~fQ~~F~hyp~Qq~c~ 122 (228)
T PF06239_consen 44 AKDKATFLEAVDIFKQRDVRRRGHVEFIYAALKKMDEFGVEKDLEVYKALLDVFPK-GKFVPRNFFQAEFMHYPRQQECA 122 (228)
T ss_pred cccHHHHHHHHHHHHhcCCCCcChHHHHHHHHHHHHHcCCcccHHHHHHHHHhCCC-CCcccccHHHHHhccCcHHHHHH
Confidence 45777888888887654 5666667778888899999999999999999876 433 223
Q ss_pred HHHHHhhcc----CccccHHHHHHHHHhcCCc
Q 026720 65 FKVFNLMRE----KNLQSWTIMISGLADNSRG 92 (234)
Q Consensus 65 ~~~~~~m~~----~~~~~~~~~i~~~~~~g~~ 92 (234)
+++.+.|.+ ||..++..+++.|++.+..
T Consensus 123 i~lL~qME~~gV~Pd~Et~~~ll~iFG~~s~p 154 (228)
T PF06239_consen 123 IDLLEQMENNGVMPDKETEQMLLNIFGRKSHP 154 (228)
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHhccccHH
Confidence 445555553 4555666666666555543
No 462
>PF05843 Suf: Suppressor of forked protein (Suf); InterPro: IPR008847 This domain consists of several eukaryotic suppressor of forked (Suf) like proteins. The Drosophila melanogaster suppressor of forked [Su(f)] protein shares homology with the Saccharomyces cerevisiae RNA14 protein and the 77 kDa subunit of Homo sapiens cleavage stimulation factor, which are proteins involved in mRNA 3' end formation. This suggests a role for Su(f) in mRNA 3' end formation in Drosophila. The su(f) gene produces three transcripts; two of them are polyadenylated at the end of the transcription unit, and one is a truncated transcript, polyadenylated in intron 4. It is thought that su(f) plays a role in the regulation of poly(A) site utilisation and the GU-rich sequence is important for this regulation to occur [].; GO: 0006397 mRNA processing, 0005634 nucleus; PDB: 2L9B_B 2OND_B 2OOE_A 4E85_B 4EBA_C 4E6H_A 2UY1_B.
Probab=93.78 E-value=0.28 Score=39.13 Aligned_cols=89 Identities=17% Similarity=0.161 Sum_probs=58.8
Q ss_pred hHHHHHHHhcCchhhhhHhHHHHHHHHhc-cchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHH
Q 026720 12 TLVSLVSACTGLINVRAGESIHSYAVVNG-LELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLA 87 (234)
Q Consensus 12 t~~~ll~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~ 87 (234)
+|..++...-+.+..+.|+.+|....+.+ +..++.+..+++. |.-.++.+.|.++|+.... .+..-|..-|.-+.
T Consensus 3 v~i~~m~~~~r~~g~~~aR~vF~~a~~~~~~~~~vy~~~A~~E-~~~~~d~~~A~~Ife~glk~f~~~~~~~~~Y~~~l~ 81 (280)
T PF05843_consen 3 VWIQYMRFMRRTEGIEAARKVFKRARKDKRCTYHVYVAYALME-YYCNKDPKRARKIFERGLKKFPSDPDFWLEYLDFLI 81 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCS-THHHHHHHHHH-HHTCS-HHHHHHHHHHHHHHHTT-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCChHHHHHHHHHHHcCCCCCHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 56677777777777888888888887653 3456656555553 3334556668888877543 46666777777777
Q ss_pred hcCCchhhhHhhhc
Q 026720 88 DNSRGNDAISLHRQ 101 (234)
Q Consensus 88 ~~g~~~~a~~l~~~ 101 (234)
+.++.++|..+|..
T Consensus 82 ~~~d~~~aR~lfer 95 (280)
T PF05843_consen 82 KLNDINNARALFER 95 (280)
T ss_dssp HTT-HHHHHHHHHH
T ss_pred HhCcHHHHHHHHHH
Confidence 88888888888877
No 463
>TIGR02795 tol_pal_ybgF tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.
Probab=93.41 E-value=1.1 Score=29.94 Aligned_cols=90 Identities=11% Similarity=-0.057 Sum_probs=68.0
Q ss_pred hHHHHHHHhcCchhhhhHhHHHHHHHHhccch--hHHHHHHHHHHHhhcCChHHHHHHHHhhcc--Cc----cccHHHHH
Q 026720 12 TLVSLVSACTGLINVRAGESIHSYAVVNGLEL--DVAIGTALVEMYSKCGHVEKAFKVFNLMRE--KN----LQSWTIMI 83 (234)
Q Consensus 12 t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~~----~~~~~~~i 83 (234)
++-.+...+.+.++.++|...+..+++..... ....+..+...|.+.|+.++|...++.... |+ ..++..+-
T Consensus 4 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~ 83 (119)
T TIGR02795 4 AYYDAALLVLKAGDYADAIQAFQAFLKKYPKSTYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLKLG 83 (119)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHHHH
Confidence 34455666777899999999999998754221 133556688889999999999999988653 33 33566667
Q ss_pred HHHHhcCCchhhhHhhhc
Q 026720 84 SGLADNSRGNDAISLHRQ 101 (234)
Q Consensus 84 ~~~~~~g~~~~a~~l~~~ 101 (234)
..+.+.|+..+|...+..
T Consensus 84 ~~~~~~~~~~~A~~~~~~ 101 (119)
T TIGR02795 84 MSLQELGDKEKAKATLQQ 101 (119)
T ss_pred HHHHHhCChHHHHHHHHH
Confidence 778889999999999887
No 464
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A ....
Probab=93.31 E-value=0.6 Score=27.92 Aligned_cols=51 Identities=12% Similarity=0.110 Sum_probs=38.7
Q ss_pred CchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc
Q 026720 22 GLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE 73 (234)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 73 (234)
..|++++|.+++......... +....-.+...|.+.|++++|..+++.+..
T Consensus 3 ~~~~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~~A~~~l~~~~~ 53 (68)
T PF14559_consen 3 KQGDYDEAIELLEKALQRNPD-NPEARLLLAQCYLKQGQYDEAEELLERLLK 53 (68)
T ss_dssp HTTHHHHHHHHHHHHHHHTTT-SHHHHHHHHHHHHHTT-HHHHHHHHHCCHG
T ss_pred hccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 357788888888888776543 555666788889999999999998888764
No 465
>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B.
Probab=93.18 E-value=0.29 Score=38.85 Aligned_cols=88 Identities=17% Similarity=0.092 Sum_probs=34.1
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhc-cchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--C-ccccHHHHHHHH
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNG-LELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--K-NLQSWTIMISGL 86 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~-~~~~~~~~i~~~ 86 (234)
..+..++..+.+.++.+++..++....... ...+...|..+-..|.+.|..++|.+.++...+ | |....+.++..+
T Consensus 111 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~A~~~~~~al~~~P~~~~~~~~l~~~l 190 (280)
T PF13429_consen 111 RYLLSALQLYYRLGDYDEAEELLEKLEELPAAPDSARFWLALAEIYEQLGDPDKALRDYRKALELDPDDPDARNALAWLL 190 (280)
T ss_dssp -------H-HHHTT-HHHHHHHHHHHHH-T---T-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TT-HHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 334444444444555555555544443221 223444444444445555555555555544322 2 233444444445
Q ss_pred HhcCCchhhhHh
Q 026720 87 ADNSRGNDAISL 98 (234)
Q Consensus 87 ~~~g~~~~a~~l 98 (234)
...|+.+++..+
T Consensus 191 i~~~~~~~~~~~ 202 (280)
T PF13429_consen 191 IDMGDYDEAREA 202 (280)
T ss_dssp CTTCHHHHHHHH
T ss_pred HHCCChHHHHHH
Confidence 555554444333
No 466
>COG5107 RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification]
Probab=93.12 E-value=0.28 Score=41.26 Aligned_cols=90 Identities=16% Similarity=0.194 Sum_probs=71.3
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhc-cchhHHHHHHHHHHHhhcCChHHHHHHHHh-hcc-CccccHHHH-HHHH
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNG-LELDVAIGTALVEMYSKCGHVEKAFKVFNL-MRE-KNLQSWTIM-ISGL 86 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~li~~~~~~g~~~~a~~~~~~-m~~-~~~~~~~~~-i~~~ 86 (234)
+.|...|++--+...++.|+.+|.+..+.| ..+++.++++++.-||. |+..-|.++|+. |.. +|+-.|-.- +.-+
T Consensus 398 ~v~C~~~N~v~r~~Gl~aaR~~F~k~rk~~~~~h~vyi~~A~~E~~~~-~d~~ta~~ifelGl~~f~d~~~y~~kyl~fL 476 (660)
T COG5107 398 FVFCVHLNYVLRKRGLEAARKLFIKLRKEGIVGHHVYIYCAFIEYYAT-GDRATAYNIFELGLLKFPDSTLYKEKYLLFL 476 (660)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHhccCCCCcceeeeHHHHHHHhc-CCcchHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 456778888888888999999999999999 56889999999988887 667788888875 543 676666444 7777
Q ss_pred HhcCCchhhhHhhhc
Q 026720 87 ADNSRGNDAISLHRQ 101 (234)
Q Consensus 87 ~~~g~~~~a~~l~~~ 101 (234)
...++-+.|..+|..
T Consensus 477 i~inde~naraLFet 491 (660)
T COG5107 477 IRINDEENARALFET 491 (660)
T ss_pred HHhCcHHHHHHHHHH
Confidence 778888888888864
No 467
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW. Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain.
Probab=93.11 E-value=0.77 Score=34.36 Aligned_cols=91 Identities=18% Similarity=0.063 Sum_probs=70.1
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHH
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLA 87 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~ 87 (234)
..+..+-..+...++.++|...+....+... .+...+..+...|...|+.++|...++...+ .+...|..+...+.
T Consensus 32 ~~~~~la~~~~~~~~~~~A~~~~~~~l~~~p-~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 110 (234)
T TIGR02521 32 KIRVQLALGYLEQGDLEVAKENLDKALEHDP-DDYLAYLALALYYQQLGELEKAEDSFRRALTLNPNNGDVLNNYGTFLC 110 (234)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 3455566777888899999999988876542 2456778888889999999999998877543 34456777777888
Q ss_pred hcCCchhhhHhhhcc
Q 026720 88 DNSRGNDAISLHRQG 102 (234)
Q Consensus 88 ~~g~~~~a~~l~~~~ 102 (234)
..|+.++|...+...
T Consensus 111 ~~g~~~~A~~~~~~~ 125 (234)
T TIGR02521 111 QQGKYEQAMQQFEQA 125 (234)
T ss_pred HcccHHHHHHHHHHH
Confidence 999999999998773
No 468
>TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW. Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain.
Probab=93.08 E-value=0.78 Score=34.34 Aligned_cols=91 Identities=12% Similarity=0.008 Sum_probs=71.8
Q ss_pred eehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccC-----ccccHHHHHH
Q 026720 10 SVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREK-----NLQSWTIMIS 84 (234)
Q Consensus 10 ~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~-----~~~~~~~~i~ 84 (234)
...+..+-..+...|+.++|...+....+... .+...+..+...|...|++++|...++..... +...|..+-.
T Consensus 65 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (234)
T TIGR02521 65 YLAYLALALYYQQLGELEKAEDSFRRALTLNP-NNGDVLNNYGTFLCQQGKYEQAMQQFEQAIEDPLYPQPARSLENAGL 143 (234)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccccchHHHHHHHH
Confidence 44566677788889999999999999887653 34557778888899999999999999886431 2345666677
Q ss_pred HHHhcCCchhhhHhhhc
Q 026720 85 GLADNSRGNDAISLHRQ 101 (234)
Q Consensus 85 ~~~~~g~~~~a~~l~~~ 101 (234)
.+...|+.++|...+..
T Consensus 144 ~~~~~g~~~~A~~~~~~ 160 (234)
T TIGR02521 144 CALKAGDFDKAEKYLTR 160 (234)
T ss_pred HHHHcCCHHHHHHHHHH
Confidence 78889999999999877
No 469
>PF09976 TPR_21: Tetratricopeptide repeat; InterPro: IPR018704 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=93.07 E-value=0.97 Score=31.97 Aligned_cols=87 Identities=8% Similarity=-0.023 Sum_probs=36.7
Q ss_pred HHHHHHHhcCchhhhhHhHHHHHHHHhccchh--HHHHHHHHHHHhhcCChHHHHHHHHhhccC--cc----ccHHHHHH
Q 026720 13 LVSLVSACTGLINVRAGESIHSYAVVNGLELD--VAIGTALVEMYSKCGHVEKAFKVFNLMREK--NL----QSWTIMIS 84 (234)
Q Consensus 13 ~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~li~~~~~~g~~~~a~~~~~~m~~~--~~----~~~~~~i~ 84 (234)
|..++.+.. .++...+...+..+++...... ....-.+-..+...|++++|...|+..... |. .....+-.
T Consensus 15 y~~~~~~~~-~~~~~~~~~~~~~l~~~~~~s~ya~~A~l~lA~~~~~~g~~~~A~~~l~~~~~~~~d~~l~~~a~l~LA~ 93 (145)
T PF09976_consen 15 YEQALQALQ-AGDPAKAEAAAEQLAKDYPSSPYAALAALQLAKAAYEQGDYDEAKAALEKALANAPDPELKPLARLRLAR 93 (145)
T ss_pred HHHHHHHHH-CCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 344444442 3444444444555544432221 112222334455555555555555543321 11 12222334
Q ss_pred HHHhcCCchhhhHhhh
Q 026720 85 GLADNSRGNDAISLHR 100 (234)
Q Consensus 85 ~~~~~g~~~~a~~l~~ 100 (234)
.+...|+.++|+..+.
T Consensus 94 ~~~~~~~~d~Al~~L~ 109 (145)
T PF09976_consen 94 ILLQQGQYDEALATLQ 109 (145)
T ss_pred HHHHcCCHHHHHHHHH
Confidence 4455555555555553
No 470
>PF13429 TPR_15: Tetratricopeptide repeat; PDB: 2VQ2_A 2PL2_B.
Probab=92.99 E-value=0.21 Score=39.58 Aligned_cols=122 Identities=12% Similarity=0.136 Sum_probs=77.9
Q ss_pred CCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhc---cCccccHHHHH
Q 026720 7 NPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMR---EKNLQSWTIMI 83 (234)
Q Consensus 7 ~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~---~~~~~~~~~~i 83 (234)
..|...|..+-..+.+.|+.++|.+.+...++.... |....+.++..+...|+.+++..++.... ..|...|..+-
T Consensus 143 ~~~~~~~~~~a~~~~~~G~~~~A~~~~~~al~~~P~-~~~~~~~l~~~li~~~~~~~~~~~l~~~~~~~~~~~~~~~~la 221 (280)
T PF13429_consen 143 PDSARFWLALAEIYEQLGDPDKALRDYRKALELDPD-DPDARNALAWLLIDMGDYDEAREALKRLLKAAPDDPDLWDALA 221 (280)
T ss_dssp -T-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-TT--HHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-HTSCCHCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCcCHHHHHHHHH
Confidence 345556666667788899999999999999886532 46678889999999999998777766543 34677888889
Q ss_pred HHHHhcCCchhhhHhhhcccccCCcCCCcEEe----eCCeeeEeecccccccc
Q 026720 84 SGLADNSRGNDAISLHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEID 132 (234)
Q Consensus 84 ~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~----~~~~~~~~~~~~a~~~~ 132 (234)
.++...|+.++|+..+... .. ..|++... ...+...+....|..+.
T Consensus 222 ~~~~~lg~~~~Al~~~~~~-~~--~~p~d~~~~~~~a~~l~~~g~~~~A~~~~ 271 (280)
T PF13429_consen 222 AAYLQLGRYEEALEYLEKA-LK--LNPDDPLWLLAYADALEQAGRKDEALRLR 271 (280)
T ss_dssp HHHHHHT-HHHHHHHHHHH-HH--HSTT-HHHHHHHHHHHT------------
T ss_pred HHhcccccccccccccccc-cc--ccccccccccccccccccccccccccccc
Confidence 9999999999999998773 22 34554333 23445566665555543
No 471
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=92.33 E-value=0.088 Score=46.05 Aligned_cols=67 Identities=24% Similarity=0.287 Sum_probs=48.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeCCeeeEeecccc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSKGVIKIGDLGMV 128 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~~~~~~~~~~~a 128 (234)
..+|..|+..+.+.+.... .......+..++. ++|..+++|+|++|.|+++.....++.|||.+
T Consensus 411 ~~lv~E~~~g~~L~~~l~~-------~~~~~~~i~~~L~---------~lH~~giiHrDlkp~NILl~~~~~~liDFGla 474 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLEG-------NPELVRKVGEIVA---------KLHKAGIVHGDLTTSNFIVRDDRLYLIDFGLG 474 (535)
T ss_pred CEEEEEecCCCcHHHHHHH-------HHHHHHHHHHHHH---------HHHhCCCccCCCChHHEEEECCcEEEEeCccc
Confidence 4577888888887765431 0112223345555 88999999999999999997677889999987
Q ss_pred ccc
Q 026720 129 KEI 131 (234)
Q Consensus 129 ~~~ 131 (234)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 663
No 472
>PF04733 Coatomer_E: Coatomer epsilon subunit; InterPro: IPR006822 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the epsilon subunit of the coatomer complex, which is involved in the regulation of intracellular protein trafficking between the endoplasmic reticulum and the Golgi complex []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006890 retrograde vesicle-mediated transport, Golgi to ER, 0030126 COPI vesicle coat; PDB: 3MV2_B 3MV3_F 3MKR_A.
Probab=92.20 E-value=0.79 Score=36.77 Aligned_cols=107 Identities=9% Similarity=0.043 Sum_probs=58.0
Q ss_pred HhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccC--ccc-c--HHHHHHHHHhcCCch
Q 026720 19 ACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREK--NLQ-S--WTIMISGLADNSRGN 93 (234)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~--~~~-~--~~~~i~~~~~~g~~~ 93 (234)
.+...|+.++|.++.... .+.......|..|.+-++.+.|.+.++.|.+- |.. + ..+-++.........
T Consensus 111 i~~~~~~~~~AL~~l~~~------~~lE~~al~Vqi~L~~~R~dlA~k~l~~~~~~~eD~~l~qLa~awv~l~~g~e~~~ 184 (290)
T PF04733_consen 111 ILFHEGDYEEALKLLHKG------GSLELLALAVQILLKMNRPDLAEKELKNMQQIDEDSILTQLAEAWVNLATGGEKYQ 184 (290)
T ss_dssp HHCCCCHHHHHHCCCTTT------TCHHHHHHHHHHHHHTT-HHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHcCCHHHHHHHHHcc------CcccHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHH
Confidence 366677888887776542 23344456777888888888888888888753 211 1 111122222234678
Q ss_pred hhhHhhhcccccCCcCCCcEEee---CCeeeEeeccccccccC
Q 026720 94 DAISLHRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDS 133 (234)
Q Consensus 94 ~a~~l~~~~~~~~~l~p~~~~~~---~~~~~~~~~~~a~~~~~ 133 (234)
+|.++|.+ +..+ ..++..+++ ......+++..|.....
T Consensus 185 ~A~y~f~E-l~~~-~~~t~~~lng~A~~~l~~~~~~eAe~~L~ 225 (290)
T PF04733_consen 185 DAFYIFEE-LSDK-FGSTPKLLNGLAVCHLQLGHYEEAEELLE 225 (290)
T ss_dssp HHHHHHHH-HHCC-S--SHHHHHHHHHHHHHCT-HHHHHHHHH
T ss_pred HHHHHHHH-HHhc-cCCCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 88888877 4332 223333332 12335566666665533
No 473
>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional
Probab=92.16 E-value=1.7 Score=32.69 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=58.1
Q ss_pred CeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHH-HhhcCC--hHHHHHHHHhhcc---CccccHHHH
Q 026720 9 NSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEM-YSKCGH--VEKAFKVFNLMRE---KNLQSWTIM 82 (234)
Q Consensus 9 ~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~-~~~~g~--~~~a~~~~~~m~~---~~~~~~~~~ 82 (234)
|...|..+-..|...++.++|...+....+.... |...+..+-.. |...|. .++|.+++++..+ .++..+..+
T Consensus 72 ~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~~L 150 (198)
T PRK10370 72 NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALMLL 150 (198)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHHHH
Confidence 4445555556677777777777777777665432 44455555554 355565 4777777776543 255566666
Q ss_pred HHHHHhcCCchhhhHhhhc
Q 026720 83 ISGLADNSRGNDAISLHRQ 101 (234)
Q Consensus 83 i~~~~~~g~~~~a~~l~~~ 101 (234)
-..+.+.|+.++|+..+..
T Consensus 151 A~~~~~~g~~~~Ai~~~~~ 169 (198)
T PRK10370 151 ASDAFMQADYAQAIELWQK 169 (198)
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 6666777777777777766
No 474
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=91.52 E-value=0.27 Score=45.66 Aligned_cols=52 Identities=29% Similarity=0.395 Sum_probs=42.5
Q ss_pred CCcccCcccccccccccccCCCCcchHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 026720 138 TDYVTTRWYRGPEVLLFSEIYGPEVDKWAMGAIMFEMLSFGILFPGKSSADQI 190 (234)
Q Consensus 138 ~~~~~~~~~~~pe~~~~~~~~~~~~d~~s~g~~l~e~~~~~~~f~~~~~~~~~ 190 (234)
....+++.|.+||...+..+ ....|.|+.|..+.|.+.|.++|.+.......
T Consensus 993 ~~~~~t~~~laPe~~lg~~h-gs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f 1044 (1205)
T KOG0606|consen 993 HAVVGTPDYLAPEILLGRRH-GSAADWWSSGVCLFEVLTGIPPFNAETPQQIF 1044 (1205)
T ss_pred ccccCCCcccCCcccccccC-CCcchhhhhhhhhhhhhcCCCCCCCcchhhhh
Confidence 34567788999999986665 57789999999999999999999987655444
No 475
>KOG1914 consensus mRNA cleavage and polyadenylation factor I complex, subunit RNA14 [RNA processing and modification]
Probab=91.50 E-value=1.1 Score=38.55 Aligned_cols=103 Identities=17% Similarity=0.237 Sum_probs=74.8
Q ss_pred CCCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccch-hHHHHHHHHHHHhhcCChHHHHHHHHh-hcc-CccccHH-H
Q 026720 6 ENPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLEL-DVAIGTALVEMYSKCGHVEKAFKVFNL-MRE-KNLQSWT-I 81 (234)
Q Consensus 6 ~~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~li~~~~~~g~~~~a~~~~~~-m~~-~~~~~~~-~ 81 (234)
..|+. +|.-.++.--+...+..|+.+|.+..+.+-.+ ++.++++++.-||. ++-.-|.++|+. |.. +|.-.|- .
T Consensus 363 ~~~tL-v~~~~mn~irR~eGlkaaR~iF~kaR~~~r~~hhVfVa~A~mEy~cs-kD~~~AfrIFeLGLkkf~d~p~yv~~ 440 (656)
T KOG1914|consen 363 IDLTL-VYCQYMNFIRRAEGLKAARKIFKKAREDKRTRHHVFVAAALMEYYCS-KDKETAFRIFELGLKKFGDSPEYVLK 440 (656)
T ss_pred cCCce-ehhHHHHHHHHhhhHHHHHHHHHHHhhccCCcchhhHHHHHHHHHhc-CChhHHHHHHHHHHHhcCCChHHHHH
Confidence 34444 67777888878888999999999999988766 88899999988887 566678888875 443 4554443 3
Q ss_pred HHHHHHhcCCchhhhHhhhcccccCCcCCC
Q 026720 82 MISGLADNSRGNDAISLHRQGYFHRDLKPS 111 (234)
Q Consensus 82 ~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~ 111 (234)
-+.-+.+-++-..|.-+|.. .+.+.+.|+
T Consensus 441 YldfL~~lNdd~N~R~LFEr-~l~s~l~~~ 469 (656)
T KOG1914|consen 441 YLDFLSHLNDDNNARALFER-VLTSVLSAD 469 (656)
T ss_pred HHHHHHHhCcchhHHHHHHH-HHhccCChh
Confidence 36777777888888888877 455444444
No 476
>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional
Probab=91.24 E-value=1.1 Score=37.12 Aligned_cols=81 Identities=9% Similarity=-0.095 Sum_probs=52.6
Q ss_pred hcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHHhcCCchhhh
Q 026720 20 CTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLADNSRGNDAI 96 (234)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~~~g~~~~a~ 96 (234)
+...+++++|...+...++... .+...+..+-..|.+.|++++|...++...+ .+...|..+-.++.+.|++++|+
T Consensus 12 a~~~~~~~~Ai~~~~~Al~~~P-~~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~~lg~~~eA~ 90 (356)
T PLN03088 12 AFVDDDFALAVDLYTQAIDLDP-NNAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACMKLEEYQTAK 90 (356)
T ss_pred HHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCCHHHHH
Confidence 3355677777777777776443 2445666666777777777777777766543 24456666666677777777777
Q ss_pred Hhhhc
Q 026720 97 SLHRQ 101 (234)
Q Consensus 97 ~l~~~ 101 (234)
..+..
T Consensus 91 ~~~~~ 95 (356)
T PLN03088 91 AALEK 95 (356)
T ss_pred HHHHH
Confidence 76654
No 477
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=91.21 E-value=1.2 Score=39.76 Aligned_cols=89 Identities=12% Similarity=-0.039 Sum_probs=61.8
Q ss_pred hHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--C-ccccHHHHHHHHHh
Q 026720 12 TLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--K-NLQSWTIMISGLAD 88 (234)
Q Consensus 12 t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~-~~~~~~~~i~~~~~ 88 (234)
+|..+-..+...|+.++|...+...++... .+..++..+-..|...|++++|...|+...+ | ++..|..+-..+.+
T Consensus 367 ~~~~la~~~~~~g~~~eA~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~kal~l~P~~~~~~~~la~~~~~ 445 (615)
T TIGR00990 367 SYIKRASMNLELGDPDKAEEDFDKALKLNS-EDPDIYYHRAQLHFIKGEFAQAGKDYQKSIDLDPDFIFSHIQLGVTQYK 445 (615)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCccCHHHHHHHHHHHHH
Confidence 555566666777788888888887766532 2355677777778888888888888776543 2 44556556666777
Q ss_pred cCCchhhhHhhhc
Q 026720 89 NSRGNDAISLHRQ 101 (234)
Q Consensus 89 ~g~~~~a~~l~~~ 101 (234)
.|+.++|+..+..
T Consensus 446 ~g~~~eA~~~~~~ 458 (615)
T TIGR00990 446 EGSIASSMATFRR 458 (615)
T ss_pred CCCHHHHHHHHHH
Confidence 7888888887766
No 478
>KOG4318 consensus Bicoid mRNA stability factor [RNA processing and modification]
Probab=91.05 E-value=0.3 Score=44.29 Aligned_cols=83 Identities=13% Similarity=0.038 Sum_probs=62.9
Q ss_pred CCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc----CccccHHHH
Q 026720 7 NPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE----KNLQSWTIM 82 (234)
Q Consensus 7 ~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~----~~~~~~~~~ 82 (234)
.||..+|..++++-...|+.+-|+.+..+|++.|+.-+..-|..|+-+ .+....+..+...|.+ |+.-|+..-
T Consensus 201 ~~~s~~l~a~l~~alaag~~d~Ak~ll~emke~gfpir~HyFwpLl~g---~~~~q~~e~vlrgmqe~gv~p~seT~ady 277 (1088)
T KOG4318|consen 201 APTSETLHAVLKRALAAGDVDGAKNLLYEMKEKGFPIRAHYFWPLLLG---INAAQVFEFVLRGMQEKGVQPGSETQADY 277 (1088)
T ss_pred CCChHHHHHHHHHHHhcCchhhHHHHHHHHHHcCCCcccccchhhhhc---CccchHHHHHHHHHHHhcCCCCcchhHHH
Confidence 488888888888888888888899999999888887777767777755 6777777777777764 566677666
Q ss_pred HHHHHhcCCc
Q 026720 83 ISGLADNSRG 92 (234)
Q Consensus 83 i~~~~~~g~~ 92 (234)
+..+..+|..
T Consensus 278 vip~l~N~~t 287 (1088)
T KOG4318|consen 278 VIPQLSNGQT 287 (1088)
T ss_pred HHhhhcchhh
Confidence 6655555553
No 479
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=90.75 E-value=1.6 Score=39.35 Aligned_cols=91 Identities=9% Similarity=0.062 Sum_probs=67.3
Q ss_pred eehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--CccccHHH-HHHHH
Q 026720 10 SVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--KNLQSWTI-MISGL 86 (234)
Q Consensus 10 ~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~~~~~~~~-~i~~~ 86 (234)
...+..+-..+.+.|+.++|...+....+.... +...+..+...|.+.|+.++|...++.+.. |+...+.. +...+
T Consensus 284 ~~a~~~lg~~l~~~g~~~eA~~~l~~al~l~P~-~~~a~~~La~~l~~~G~~~eA~~~l~~al~~~P~~~~~~~~~a~al 362 (656)
T PRK15174 284 VRIVTLYADALIRTGQNEKAIPLLQQSLATHPD-LPYVRAMYARALRQVGQYTAASDEFVQLAREKGVTSKWNRYAAAAL 362 (656)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 346667777788888899999888888775432 344567788889999999999998888663 44333333 35668
Q ss_pred HhcCCchhhhHhhhc
Q 026720 87 ADNSRGNDAISLHRQ 101 (234)
Q Consensus 87 ~~~g~~~~a~~l~~~ 101 (234)
.+.|+.++|+..+..
T Consensus 363 ~~~G~~deA~~~l~~ 377 (656)
T PRK15174 363 LQAGKTSEAESVFEH 377 (656)
T ss_pred HHCCCHHHHHHHHHH
Confidence 888999999988866
No 480
>PRK11189 lipoprotein NlpI; Provisional
Probab=90.59 E-value=2.1 Score=34.34 Aligned_cols=82 Identities=13% Similarity=-0.072 Sum_probs=62.2
Q ss_pred HhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--C-ccccHHHHHHHHHhcCCchhh
Q 026720 19 ACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--K-NLQSWTIMISGLADNSRGNDA 95 (234)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~-~~~~~~~~i~~~~~~g~~~~a 95 (234)
.+.+.|+.++|...+...++... .+...|+.+-..|...|+.++|...|+...+ | +..+|..+-..+...|+.++|
T Consensus 73 ~~~~~g~~~~A~~~~~~Al~l~P-~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~g~~~eA 151 (296)
T PRK11189 73 LYDSLGLRALARNDFSQALALRP-DMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGIALYYGGRYELA 151 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHH
Confidence 45667788888888877776443 2466788888889999999999888887643 3 456677777777888999999
Q ss_pred hHhhhc
Q 026720 96 ISLHRQ 101 (234)
Q Consensus 96 ~~l~~~ 101 (234)
+..+..
T Consensus 152 ~~~~~~ 157 (296)
T PRK11189 152 QDDLLA 157 (296)
T ss_pred HHHHHH
Confidence 888866
No 481
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=90.59 E-value=0.55 Score=36.49 Aligned_cols=43 Identities=26% Similarity=0.463 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEee-CCeeeEeecccccc
Q 026720 79 WTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE 130 (234)
Q Consensus 79 ~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~ 130 (234)
|..+..++. ++|..+++|+|++|.|+++. .....+.||+.+..
T Consensus 148 ~~~i~~~l~---------~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 148 WQAIGQLIA---------RFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHHH---------HHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 555566666 89999999999999999994 44577888875554
No 482
>PRK12370 invasion protein regulator; Provisional
Probab=90.41 E-value=1.6 Score=38.39 Aligned_cols=121 Identities=13% Similarity=-0.028 Sum_probs=77.1
Q ss_pred eehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--Cccc-cHHHHHHHH
Q 026720 10 SVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--KNLQ-SWTIMISGL 86 (234)
Q Consensus 10 ~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~~~~-~~~~~i~~~ 86 (234)
..++..+=..+...|+.++|...+...++.... +...+..+-..|...|+.++|...+++..+ |+.. .+..+...+
T Consensus 338 ~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~~ 416 (553)
T PRK12370 338 PQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWIT 416 (553)
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Confidence 344555545566788899999999998876532 344677788889999999999999888654 3322 333344456
Q ss_pred HhcCCchhhhHhhhcccccCCcCCCcEE----eeCCeeeEeeccccccccC
Q 026720 87 ADNSRGNDAISLHRQGYFHRDLKPSNLL----VSKGVIKIGDLGMVKEIDS 133 (234)
Q Consensus 87 ~~~g~~~~a~~l~~~~~~~~~l~p~~~~----~~~~~~~~~~~~~a~~~~~ 133 (234)
...|+.++|+..+.. ..... .|+... +...+...+++..|.....
T Consensus 417 ~~~g~~eeA~~~~~~-~l~~~-~p~~~~~~~~la~~l~~~G~~~eA~~~~~ 465 (553)
T PRK12370 417 YYHTGIDDAIRLGDE-LRSQH-LQDNPILLSMQVMFLSLKGKHELARKLTK 465 (553)
T ss_pred HhccCHHHHHHHHHH-HHHhc-cccCHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 678889999988866 22211 233221 1223445666666666544
No 483
>PRK14879 serine/threonine protein kinase; Provisional
Probab=90.34 E-value=0.25 Score=37.21 Aligned_cols=69 Identities=22% Similarity=0.240 Sum_probs=44.1
Q ss_pred HHHHHHHhhcCChHHHHHHHHhhccCcccc-HHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeCCeeeEeeccc
Q 026720 49 TALVEMYSKCGHVEKAFKVFNLMREKNLQS-WTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSKGVIKIGDLGM 127 (234)
Q Consensus 49 ~~li~~~~~~g~~~~a~~~~~~m~~~~~~~-~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~~~~~~~~~~~ 127 (234)
..++..|+..+.+.+..... .. .... ...+..++. ++|..+++|+|++|.|+++......+.||+.
T Consensus 74 ~~lv~e~~~G~~L~~~~~~~---~~-~~~~i~~~i~~~l~---------~lH~~~i~H~Dl~p~Nil~~~~~~~liDf~~ 140 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINSN---GM-EELELSREIGRLVG---------KLHSAGIIHGDLTTSNMILSGGKIYLIDFGL 140 (211)
T ss_pred CEEEEEEeCCcCHHHHHHhc---cH-HHHHHHHHHHHHHH---------HHHhCCcccCCCCcccEEEECCCEEEEECCc
Confidence 34667777777776654221 11 1111 112233333 7888889999999999999756677889987
Q ss_pred ccc
Q 026720 128 VKE 130 (234)
Q Consensus 128 a~~ 130 (234)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 665
No 484
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B.
Probab=90.16 E-value=1.1 Score=26.49 Aligned_cols=47 Identities=17% Similarity=0.318 Sum_probs=20.7
Q ss_pred HhhcCChHHHHHHHHhhccC---ccccHHHHHHHHHhcCCchhhhHhhhc
Q 026720 55 YSKCGHVEKAFKVFNLMREK---NLQSWTIMISGLADNSRGNDAISLHRQ 101 (234)
Q Consensus 55 ~~~~g~~~~a~~~~~~m~~~---~~~~~~~~i~~~~~~g~~~~a~~l~~~ 101 (234)
|.+.|++++|...|+...+. +.-.|..+-..+.+.|+.++|+..+..
T Consensus 7 ~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 56 (65)
T PF13432_consen 7 LYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYER 56 (65)
T ss_dssp HHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 44445555555555444332 223333334444445555555544443
No 485
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=90.06 E-value=0.32 Score=36.29 Aligned_cols=66 Identities=23% Similarity=0.298 Sum_probs=44.8
Q ss_pred HHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchhhhHhhhcccccCCcCCCcEEeeCCeeeEeeccccc
Q 026720 50 ALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGNDAISLHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVK 129 (234)
Q Consensus 50 ~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~~~~~~~~~~~~~~a~ 129 (234)
.++..|+..+.+.+...- ........+..++. ++|..+++|++++|.|+++......+.||+.+.
T Consensus 73 ~lv~e~~~g~~l~~~~~~------~~~~~~~~i~~~l~---------~lH~~gi~H~Dl~~~Nil~~~~~~~liDfg~a~ 137 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEE------GNDELLREIGRLVG---------KLHKAGIVHGDLTTSNIIVRDDKLYLIDFGLGK 137 (199)
T ss_pred EEEEEEECCccHHHHHhh------cHHHHHHHHHHHHH---------HHHHCCeecCCCCcceEEEECCcEEEEECCCCc
Confidence 567777777777654321 11022233345555 788889999999999999976677888998765
Q ss_pred c
Q 026720 130 E 130 (234)
Q Consensus 130 ~ 130 (234)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 5
No 486
>PRK12370 invasion protein regulator; Provisional
Probab=90.01 E-value=2.2 Score=37.57 Aligned_cols=79 Identities=6% Similarity=-0.190 Sum_probs=55.0
Q ss_pred CchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--C-ccccHHHHHHHHHhcCCchhhhHh
Q 026720 22 GLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--K-NLQSWTIMISGLADNSRGNDAISL 98 (234)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~-~~~~~~~~i~~~~~~g~~~~a~~l 98 (234)
..+..++|...+...++... -+...+..+-..+...|+.++|...+++..+ | +...|..+-..+.+.|+.++|+..
T Consensus 316 ~~~~~~~A~~~~~~Al~ldP-~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~ 394 (553)
T PRK12370 316 KQNAMIKAKEHAIKATELDH-NNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQT 394 (553)
T ss_pred cchHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 44567778887777776432 2455666666677788888888888877543 3 344666667777888888888888
Q ss_pred hhc
Q 026720 99 HRQ 101 (234)
Q Consensus 99 ~~~ 101 (234)
+..
T Consensus 395 ~~~ 397 (553)
T PRK12370 395 INE 397 (553)
T ss_pred HHH
Confidence 776
No 487
>PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional
Probab=89.81 E-value=1.9 Score=40.74 Aligned_cols=104 Identities=13% Similarity=-0.021 Sum_probs=68.3
Q ss_pred CCCeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc--C-ccccHHHHH
Q 026720 7 NPNSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE--K-NLQSWTIMI 83 (234)
Q Consensus 7 ~~~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~--~-~~~~~~~~i 83 (234)
.|+...+..+-..+.+.|+.++|...+...++... .+...++.+-..+...|+.++|...++...+ | +...+..+-
T Consensus 606 ~P~~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~P-d~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA 684 (987)
T PRK09782 606 APSANAYVARATIYRQRHNVPAAVSDLRAALELEP-NNSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLA 684 (987)
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45555666666677777777777777777766432 1344566666677777888888777766432 2 455677777
Q ss_pred HHHHhcCCchhhhHhhhcccccCCcCCCcEE
Q 026720 84 SGLADNSRGNDAISLHRQGYFHRDLKPSNLL 114 (234)
Q Consensus 84 ~~~~~~g~~~~a~~l~~~~~~~~~l~p~~~~ 114 (234)
..+.+.|+.++|+..+.. .+ .+.|+..-
T Consensus 685 ~al~~lGd~~eA~~~l~~-Al--~l~P~~a~ 712 (987)
T PRK09782 685 YVNQRLDDMAATQHYARL-VI--DDIDNQAL 712 (987)
T ss_pred HHHHHCCCHHHHHHHHHH-HH--hcCCCCch
Confidence 777788888888877766 33 24465543
No 488
>PF00637 Clathrin: Region in Clathrin and VPS; InterPro: IPR000547 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ]. Clathrin is a trimer composed of three heavy chains and three light chains, each monomer projecting outwards like a leg; this three-legged structure is known as a triskelion [, ]. The heavy chains form the legs, their N-terminal beta-propeller regions extending outwards, while their C-terminal alpha-alpha-superhelical regions form the central hub of the triskelion. Peptide motifs can bind between the beta-propeller blades. The light chains appear to have a regulatory role, and may help orient the assembly and disassembly of clathrin coats as they interact with hsc70 uncoating ATPase []. Clathrin triskelia self-polymerise into a curved lattice by twisting individual legs together. The clathrin lattice forms around a vesicle as it buds from the TGN, plasma membrane or endosomes, acting to stabilise the vesicle and facilitate the budding process []. The multiple blades created when the triskelia polymerise are involved in multiple protein interactions, enabling the recruitment of different cargo adaptors and membrane attachment proteins []. This entry represents the 7-fold alpha-alpha-superhelical ARM-type repeat found at the C-terminal of clathrin heavy chains and in VPS (vacuolar protein sorting-associated) proteins. In clathrin heavy chains, the C-terminal 7-fold ARM-type repeats interact to form the central hub of the triskelion. VPS proteins are required for vacuolar assembly and vacuolar traffick, and contain one clathrin-type repeat []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport; PDB: 3LVH_A 3LVG_C 1B89_A 3QIL_L.
Probab=89.13 E-value=0.75 Score=32.34 Aligned_cols=84 Identities=17% Similarity=0.095 Sum_probs=65.5
Q ss_pred HHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccCccccHHHHHHHHHhcCCchh
Q 026720 15 SLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREKNLQSWTIMISGLADNSRGND 94 (234)
Q Consensus 15 ~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~~~~~~~~~i~~~~~~g~~~~ 94 (234)
.+++.+.+.+......+.....++.+-..+....|.|+..|++.+..+...+.++ ..+-.-...++.-|-+.|..++
T Consensus 12 ~vi~~~~~~~~~~~l~~yLe~~~~~~~~~~~~~~~~L~~ly~~~~~~~~l~~~L~---~~~~yd~~~~~~~c~~~~l~~~ 88 (143)
T PF00637_consen 12 EVISAFEERNQPEELIEYLEALVKENKENNPDLHTLLLELYIKYDPYEKLLEFLK---TSNNYDLDKALRLCEKHGLYEE 88 (143)
T ss_dssp CCHHHCTTTT-GGGCTCCHHHHHHTSTC-SHHHHHHHHHHHHCTTTCCHHHHTTT---SSSSS-CTHHHHHHHTTTSHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHhcccccCHHHHHHHHHHHHhcCCchHHHHHcc---cccccCHHHHHHHHHhcchHHH
Confidence 4577888888888888999999887766778889999999999988888877655 3333555667888888899999
Q ss_pred hhHhhhc
Q 026720 95 AISLHRQ 101 (234)
Q Consensus 95 a~~l~~~ 101 (234)
|..++..
T Consensus 89 a~~Ly~~ 95 (143)
T PF00637_consen 89 AVYLYSK 95 (143)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9998876
No 489
>TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70).
Probab=89.07 E-value=2.5 Score=37.78 Aligned_cols=98 Identities=11% Similarity=-0.090 Sum_probs=67.7
Q ss_pred ehHHHHHHHhcCchhhhhHhHHHHHHHHhccchh-HHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHH
Q 026720 11 VTLVSLVSACTGLINVRAGESIHSYAVVNGLELD-VAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGL 86 (234)
Q Consensus 11 ~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~ 86 (234)
..++.+-..+...|+.++|...+...++. .|+ ...|..+...|...|+.++|...|+...+ .+...|..+-..+
T Consensus 332 ~a~~~lg~~~~~~g~~~eA~~~~~kal~l--~P~~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~ 409 (615)
T TIGR00990 332 IALNLRGTFKCLKGKHLEALADLSKSIEL--DPRVTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLH 409 (615)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc--CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34555555566778888888888887764 343 44677777778888888888888876543 3456777777778
Q ss_pred HhcCCchhhhHhhhcccccCCcCCCcE
Q 026720 87 ADNSRGNDAISLHRQGYFHRDLKPSNL 113 (234)
Q Consensus 87 ~~~g~~~~a~~l~~~~~~~~~l~p~~~ 113 (234)
...|+.++|+..|... + .+.|++.
T Consensus 410 ~~~g~~~~A~~~~~ka-l--~l~P~~~ 433 (615)
T TIGR00990 410 FIKGEFAQAGKDYQKS-I--DLDPDFI 433 (615)
T ss_pred HHcCCHHHHHHHHHHH-H--HcCccCH
Confidence 8888888888888763 2 2445543
No 490
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=88.90 E-value=0.98 Score=33.75 Aligned_cols=36 Identities=31% Similarity=0.349 Sum_probs=30.0
Q ss_pred HhhhcccccCCcCCCcEEee-CCeeeEeecccccccc
Q 026720 97 SLHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEID 132 (234)
Q Consensus 97 ~l~~~~~~~~~l~p~~~~~~-~~~~~~~~~~~a~~~~ 132 (234)
++|..+++|+|++|.|+++. ....++.|||.+....
T Consensus 140 ~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 140 KAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred HHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 78888899999999999994 5677899999775543
No 491
>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B.
Probab=88.82 E-value=0.92 Score=26.89 Aligned_cols=54 Identities=11% Similarity=-0.017 Sum_probs=44.6
Q ss_pred HhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhcc
Q 026720 19 ACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMRE 73 (234)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~ 73 (234)
.+.+.|++++|...+...++... -+.-.+..+-..+.+.|+.++|...|+...+
T Consensus 6 ~~~~~g~~~~A~~~~~~~l~~~P-~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~ 59 (65)
T PF13432_consen 6 ALYQQGDYDEAIAAFEQALKQDP-DNPEAWYLLGRILYQQGRYDEALAYYERALE 59 (65)
T ss_dssp HHHHCTHHHHHHHHHHHHHCCST-THHHHHHHHHHHHHHTT-HHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45567899999999999998763 3677888899999999999999999988643
No 492
>KOG3941 consensus Intermediate in Toll signal transduction pathway (ECSIT) [Signal transduction mechanisms]
Probab=88.31 E-value=0.67 Score=36.72 Aligned_cols=67 Identities=13% Similarity=0.097 Sum_probs=53.4
Q ss_pred CccCCCCCCeehHHHHHHHhcCch----------------hhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCC-hHH
Q 026720 1 MKLANENPNSVTLVSLVSACTGLI----------------NVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGH-VEK 63 (234)
Q Consensus 1 M~~~g~~~~~~t~~~ll~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~-~~~ 63 (234)
|.++|+..|..+|+.||+.+-+.. .-+.+..+.++|.--|+.||..+...||+.|++-+. +..
T Consensus 98 m~eyGVerDl~vYk~LlnvfPKgkfiP~nvfQ~~F~HYP~QQ~C~I~vLeqME~hGVmPdkE~e~~lvn~FGr~~~p~~K 177 (406)
T KOG3941|consen 98 MKEYGVERDLDVYKGLLNVFPKGKFIPQNVFQKVFLHYPQQQNCAIKVLEQMEWHGVMPDKEIEDILVNAFGRWNFPTKK 177 (406)
T ss_pred HHHhcchhhHHHHHHHHHhCcccccccHHHHHHHHhhCchhhhHHHHHHHHHHHcCCCCchHHHHHHHHHhccccccHHH
Confidence 567899999999999999776532 123567789999999999999999999999999886 333
Q ss_pred HHHH
Q 026720 64 AFKV 67 (234)
Q Consensus 64 a~~~ 67 (234)
..++
T Consensus 178 ~~Rm 181 (406)
T KOG3941|consen 178 VKRM 181 (406)
T ss_pred HHHH
Confidence 3333
No 493
>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A ....
Probab=88.23 E-value=0.74 Score=27.53 Aligned_cols=46 Identities=13% Similarity=0.183 Sum_probs=37.6
Q ss_pred hhcCChHHHHHHHHhhcc--C-ccccHHHHHHHHHhcCCchhhhHhhhc
Q 026720 56 SKCGHVEKAFKVFNLMRE--K-NLQSWTIMISGLADNSRGNDAISLHRQ 101 (234)
Q Consensus 56 ~~~g~~~~a~~~~~~m~~--~-~~~~~~~~i~~~~~~g~~~~a~~l~~~ 101 (234)
.+.|++++|.+.|+.... | |...+..+...+.+.|+.++|..++..
T Consensus 2 l~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~~A~~~l~~ 50 (68)
T PF14559_consen 2 LKQGDYDEAIELLEKALQRNPDNPEARLLLAQCYLKQGQYDEAEELLER 50 (68)
T ss_dssp HHTTHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHTT-HHHHHHHHHC
T ss_pred hhccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 467899999999988653 3 566677789999999999999999987
No 494
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=88.05 E-value=1.2 Score=32.73 Aligned_cols=37 Identities=41% Similarity=0.535 Sum_probs=30.7
Q ss_pred Hhhh-cccccCCcCCCcEEeeCCeeeEeeccccccccC
Q 026720 97 SLHR-QGYFHRDLKPSNLLVSKGVIKIGDLGMVKEIDS 133 (234)
Q Consensus 97 ~l~~-~~~~~~~l~p~~~~~~~~~~~~~~~~~a~~~~~ 133 (234)
.+|. .+++|+|++|.|+++......+.|||.+.....
T Consensus 129 ~lh~~~~ivH~Dl~p~Nili~~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 129 KLYREAGLVHGDLSEYNILVDDGKVYIIDVPQAVEIDH 166 (187)
T ss_pred HHhhccCcCcCCCChhhEEEECCcEEEEECcccccccC
Confidence 6777 789999999999999766778999998876544
No 495
>KOG2003 consensus TPR repeat-containing protein [General function prediction only]
Probab=88.01 E-value=1.7 Score=36.76 Aligned_cols=109 Identities=18% Similarity=0.240 Sum_probs=77.4
Q ss_pred ccCCCCC-CeehHHHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHh--hccCcccc
Q 026720 2 KLANENP-NSVTLVSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNL--MREKNLQS 78 (234)
Q Consensus 2 ~~~g~~~-~~~t~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~--m~~~~~~~ 78 (234)
+...+-| |...++.|-+-|-+.|+-..|.+.|-+--+ =+..++.+.-.|-.-|....-.+.++..|++ +-+|++..
T Consensus 583 q~~slip~dp~ilskl~dlydqegdksqafq~~ydsyr-yfp~nie~iewl~ayyidtqf~ekai~y~ekaaliqp~~~k 661 (840)
T KOG2003|consen 583 QANSLIPNDPAILSKLADLYDQEGDKSQAFQCHYDSYR-YFPCNIETIEWLAAYYIDTQFSEKAINYFEKAALIQPNQSK 661 (840)
T ss_pred HhcccCCCCHHHHHHHHHHhhcccchhhhhhhhhhccc-ccCcchHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCccHHH
Confidence 3445555 455566677778888877777777655322 2445677777777777777788889999987 44799999
Q ss_pred HHHHHHH-HHhcCCchhhhHhhhcccccCCcCCCcEE
Q 026720 79 WTIMISG-LADNSRGNDAISLHRQGYFHRDLKPSNLL 114 (234)
Q Consensus 79 ~~~~i~~-~~~~g~~~~a~~l~~~~~~~~~l~p~~~~ 114 (234)
|--||.. +.+.|.+.+|+.+++. +|+.+ |.++-
T Consensus 662 wqlmiasc~rrsgnyqka~d~yk~--~hrkf-pedld 695 (840)
T KOG2003|consen 662 WQLMIASCFRRSGNYQKAFDLYKD--IHRKF-PEDLD 695 (840)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHH--HHHhC-ccchH
Confidence 9999655 5677999999999987 46554 44443
No 496
>smart00090 RIO RIO-like kinase.
Probab=87.79 E-value=0.78 Score=35.60 Aligned_cols=35 Identities=34% Similarity=0.516 Sum_probs=29.0
Q ss_pred Hhhhcc-cccCCcCCCcEEeeCCeeeEeeccccccc
Q 026720 97 SLHRQG-YFHRDLKPSNLLVSKGVIKIGDLGMVKEI 131 (234)
Q Consensus 97 ~l~~~~-~~~~~l~p~~~~~~~~~~~~~~~~~a~~~ 131 (234)
++|..+ ++|++++|.|+++.....++.||+.+...
T Consensus 163 ~LH~~g~iiH~Dikp~NIli~~~~i~LiDFg~a~~~ 198 (237)
T smart00090 163 KLYKEGELVHGDLSEYNILVHDGKVVIIDVSQSVEL 198 (237)
T ss_pred HHHhcCCEEeCCCChhhEEEECCCEEEEEChhhhcc
Confidence 788888 99999999999997556778888876653
No 497
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=87.39 E-value=1.6 Score=39.31 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=58.5
Q ss_pred HHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccC--ccccHHHHHHHHHhcCCc
Q 026720 15 SLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREK--NLQSWTIMISGLADNSRG 92 (234)
Q Consensus 15 ~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~--~~~~~~~~i~~~~~~g~~ 92 (234)
-+-.-|++.|.++.|.++|.+. -.++--|++|.++|.+.+|.++-++...| .+..|.+.-.-+-..|++
T Consensus 770 ~iadhyan~~dfe~ae~lf~e~---------~~~~dai~my~k~~kw~da~kla~e~~~~e~t~~~yiakaedldehgkf 840 (1636)
T KOG3616|consen 770 EIADHYANKGDFEIAEELFTEA---------DLFKDAIDMYGKAGKWEDAFKLAEECHGPEATISLYIAKAEDLDEHGKF 840 (1636)
T ss_pred HHHHHhccchhHHHHHHHHHhc---------chhHHHHHHHhccccHHHHHHHHHHhcCchhHHHHHHHhHHhHHhhcch
Confidence 3455688889999998888653 23566789999999999999987765444 456777777777888888
Q ss_pred hhhhHhhhc
Q 026720 93 NDAISLHRQ 101 (234)
Q Consensus 93 ~~a~~l~~~ 101 (234)
-+|..++..
T Consensus 841 ~eaeqlyit 849 (1636)
T KOG3616|consen 841 AEAEQLYIT 849 (1636)
T ss_pred hhhhheeEE
Confidence 888777643
No 498
>PRK11447 cellulose synthase subunit BcsC; Provisional
Probab=87.28 E-value=4.1 Score=39.44 Aligned_cols=87 Identities=10% Similarity=0.011 Sum_probs=45.3
Q ss_pred HHHHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHHHHHHHHhhccC---ccccHHHHHHHHHhcC
Q 026720 14 VSLVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEKAFKVFNLMREK---NLQSWTIMISGLADNS 90 (234)
Q Consensus 14 ~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~a~~~~~~m~~~---~~~~~~~~i~~~~~~g 90 (234)
..+-..+.+.|+.++|...+...++... .+...+..+...|...|+.++|...++..... +...+..+-..+.+.|
T Consensus 607 ~~La~~~~~~g~~~~A~~~y~~al~~~P-~~~~a~~~la~~~~~~g~~~eA~~~l~~ll~~~p~~~~~~~~la~~~~~~g 685 (1157)
T PRK11447 607 LTLADWAQQRGDYAAARAAYQRVLTREP-GNADARLGLIEVDIAQGDLAAARAQLAKLPATANDSLNTQRRVALAWAALG 685 (1157)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHhccCCCChHHHHHHHHHHHhCC
Confidence 3344445555566666666665555432 13445555555666666666666665554431 2233344444455556
Q ss_pred CchhhhHhhhc
Q 026720 91 RGNDAISLHRQ 101 (234)
Q Consensus 91 ~~~~a~~l~~~ 101 (234)
+.++|..++..
T Consensus 686 ~~~eA~~~~~~ 696 (1157)
T PRK11447 686 DTAAAQRTFNR 696 (1157)
T ss_pred CHHHHHHHHHH
Confidence 66666665554
No 499
>CHL00033 ycf3 photosystem I assembly protein Ycf3
Probab=87.20 E-value=6.1 Score=28.54 Aligned_cols=87 Identities=10% Similarity=-0.124 Sum_probs=50.4
Q ss_pred HHHHHHHhcCchhhhhHhHHHHHHHHhccch--hHHHHHHHHHHHhhcCChHHHHHHHHhhcc---CccccHHHHHHHHH
Q 026720 13 LVSLVSACTGLINVRAGESIHSYAVVNGLEL--DVAIGTALVEMYSKCGHVEKAFKVFNLMRE---KNLQSWTIMISGLA 87 (234)
Q Consensus 13 ~~~ll~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~li~~~~~~g~~~~a~~~~~~m~~---~~~~~~~~~i~~~~ 87 (234)
|..+...+...++.++|...+.........+ ...++..+-..|.+.|..++|...++.... ....+++.+...+.
T Consensus 38 ~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~la~i~~ 117 (168)
T CHL00033 38 YYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNNMAVICH 117 (168)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3444445555677777777777776543222 223666677777778888888777766432 12234444444444
Q ss_pred -------hcCCchhhhHhh
Q 026720 88 -------DNSRGNDAISLH 99 (234)
Q Consensus 88 -------~~g~~~~a~~l~ 99 (234)
..|+.++|+..+
T Consensus 118 ~~~~~~~~~g~~~~A~~~~ 136 (168)
T CHL00033 118 YRGEQAIEQGDSEIAEAWF 136 (168)
T ss_pred HhhHHHHHcccHHHHHHHH
Confidence 556666555444
No 500
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=87.10 E-value=3.2 Score=37.42 Aligned_cols=85 Identities=19% Similarity=0.206 Sum_probs=39.4
Q ss_pred HHHHhcCchhhhhHhHHHHHHHHhccchhHHHHHHHHHHHhhcCChHH----HHHHHHhhcc--C-ccccHHHHHHHHHh
Q 026720 16 LVSACTGLINVRAGESIHSYAVVNGLELDVAIGTALVEMYSKCGHVEK----AFKVFNLMRE--K-NLQSWTIMISGLAD 88 (234)
Q Consensus 16 ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~li~~~~~~g~~~~----a~~~~~~m~~--~-~~~~~~~~i~~~~~ 88 (234)
+..++.+.|+.++|.+.+....+... .+...+..+-..|.+.|..++ |...|+.... | +...|..+-..+.+
T Consensus 218 l~~~l~~~g~~~eA~~~~~~al~~~p-~~~~~~~~Lg~~l~~~G~~~eA~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~ 296 (656)
T PRK15174 218 AVDTLCAVGKYQEAIQTGESALARGL-DGAALRRSLGLAYYQSGRSREAKLQAAEHWRHALQFNSDNVRIVTLYADALIR 296 (656)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHcCCchhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Confidence 33445555555555555555554332 123344445555555555543 3444444321 1 23344444444444
Q ss_pred cCCchhhhHhhhc
Q 026720 89 NSRGNDAISLHRQ 101 (234)
Q Consensus 89 ~g~~~~a~~l~~~ 101 (234)
.|+.++|+..+..
T Consensus 297 ~g~~~eA~~~l~~ 309 (656)
T PRK15174 297 TGQNEKAIPLLQQ 309 (656)
T ss_pred CCCHHHHHHHHHH
Confidence 4555555444443
Done!