Your job contains 1 sequence.
>026723
MLLENIGTSVLVSKNQLPELHQLMTEAAEILNLEAPDLYVRQSPVPNAYTLAISGKKPFV
VVHTSLVELLTRKELQAVLAHELGHLKCDHGVWLTFANILTLGAYTIPGIGGMIAQSLEE
QLFRWLRAAELTCDRAALLVSQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKA
SSSPVGWYIRNAQTRQLSHPLLVLRAREIDAWSRSQDYASLLKRAMKMNTVHTF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026723
(234 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092010 - symbol:AT3G27110 species:3702 "Arabi... 1026 1.4e-103 1
UNIPROTKB|O53978 - symbol:Rv1977 "Uncharacterized protein... 331 6.2e-30 1
UNIPROTKB|Q887E6 - symbol:PSPTO_1350 "Uncharacterized pro... 147 4.0e-08 1
UNIPROTKB|P65815 - symbol:htpX "Protease HtpX homolog" sp... 120 3.7e-07 2
TIGR_CMR|CHY_0108 - symbol:CHY_0108 "peptidase, M48 famil... 133 9.4e-07 1
TIGR_CMR|GSU_1189 - symbol:GSU_1189 "peptidase, M48 famil... 117 7.1e-06 2
UNIPROTKB|Q8EKI3 - symbol:SO_0110 "Zn-dependent protease ... 118 0.00015 1
TIGR_CMR|SO_0110 - symbol:SO_0110 "conserved hypothetical... 118 0.00015 1
UNIPROTKB|Q3AAB8 - symbol:CHY_2097 "Peptidase, homolog" s... 109 0.00088 1
TIGR_CMR|CHY_2097 - symbol:CHY_2097 "peptidase, homolog" ... 109 0.00088 1
>TAIR|locus:2092010 [details] [associations]
symbol:AT3G27110 species:3702 "Arabidopsis thaliana"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IEA;ISS] InterPro:IPR001915 Pfam:PF01435 EMBL:CP002686
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AB026649
EMBL:AY045604 EMBL:BT002704 EMBL:AK316844 IPI:IPI00519777
RefSeq:NP_566808.1 RefSeq:NP_850640.1 UniGene:At.6116
ProteinModelPortal:Q9LSC4 SMR:Q9LSC4 STRING:Q9LSC4 MEROPS:M48.A02
PRIDE:Q9LSC4 EnsemblPlants:AT3G27110.1 EnsemblPlants:AT3G27110.2
GeneID:822330 KEGG:ath:AT3G27110 TAIR:At3g27110 InParanoid:Q9LSC4
OMA:AYTFAMR PhylomeDB:Q9LSC4 ProtClustDB:CLSN2688820
Genevestigator:Q9LSC4 Uniprot:Q9LSC4
Length = 344
Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
Identities = 199/231 (86%), Positives = 215/231 (93%)
Query: 1 MLLENIGTSVLVSKNQLPELHQLMTEAAEILNLEAPDLYVRQSPVPNAYTLAISGKKPFV 60
MLLENIGTSVLVSKNQL +LH L+ EAAEILN+EAPDLYVRQSPVPNAYTLAISGKKPF+
Sbjct: 111 MLLENIGTSVLVSKNQLSDLHGLLVEAAEILNIEAPDLYVRQSPVPNAYTLAISGKKPFI 170
Query: 61 VVHTSLVELLTRKELQAVLAHELGHLKCDHGVWLTFANILTLGAYTIPGIGGMIAQSLEE 120
VVHTSL+ELLT ELQAVLAHELGHLKCDHGVWLTFANILTLGAYT+P G MIA++LEE
Sbjct: 171 VVHTSLIELLTSAELQAVLAHELGHLKCDHGVWLTFANILTLGAYTVPAFGQMIARTLEE 230
Query: 121 QLFRWLRAAELTCDRAALLVSQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKA 180
QL RWLR+AELTCDRAALLV+QDPKVV+SVLMKLAGGCPS+ADQLNVDAFLEQARSYDKA
Sbjct: 231 QLLRWLRSAELTCDRAALLVAQDPKVVVSVLMKLAGGCPSIADQLNVDAFLEQARSYDKA 290
Query: 181 SSSPVGWYIRNAQTRQLSHPLLVLRAREIDAWSRSQDYASLLKRAMKMNTV 231
SSSP+GWYIRNAQT QLSHPL VLRAREID WSRS +Y SLLKRA + +TV
Sbjct: 291 SSSPLGWYIRNAQTSQLSHPLPVLRAREIDEWSRSLEYKSLLKRANRKSTV 341
>UNIPROTKB|O53978 [details] [associations]
symbol:Rv1977 "Uncharacterized protein" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001915 Pfam:PF01435 GO:GO:0005886
GO:GO:0016020 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006508 EMBL:BX842578 GO:GO:0004222 OMA:AYTFAMR EMBL:CP003248
PIR:D70890 RefSeq:NP_216493.1 RefSeq:NP_336490.1
RefSeq:YP_006515383.1 EnsemblBacteria:EBMYCT00000000136
EnsemblBacteria:EBMYCT00000070245 GeneID:13316774 GeneID:885931
GeneID:923462 KEGG:mtc:MT2029 KEGG:mtu:Rv1977 KEGG:mtv:RVBD_1977
PATRIC:18126228 TubercuList:Rv1977 HOGENOM:HOG000021658
ProtClustDB:CLSK871987 Uniprot:O53978
Length = 348
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 76/220 (34%), Positives = 123/220 (55%)
Query: 6 IGTSVLVSKNQLPELHQLMTEAAEILNLEA-PDLYVRQSPVPNAYTLAISGKKPFVVVHT 64
+ ++ V Q +L L+ E ++L+ A P+LYV QSP+ +A+T+ + KPF V+ +
Sbjct: 59 LASAARVGPRQFADLDALLDECVDVLDASAKPELYVMQSPIADAFTIGMG--KPFTVITS 116
Query: 65 SLVELLTRKELQAVLAHELGHLKCDHGVWLTFA-NILTLG-AYTIPGIGGMIAQSLEEQL 122
L +L+T E++ V+ HELGH H V+ T ++L L ++ + +GG +++ L
Sbjct: 117 GLYDLVTHDEMRFVMGHELGHALSGHAVYRTMMMHLLRLARSFGVLPVGGWALRAIVAAL 176
Query: 123 FRWLRAAELTCDRAALLVSQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKASS 182
W R +EL+ DRA LL +QD + V MKLAGGC D+L+ +AFL QAR Y+ +
Sbjct: 177 LEWQRKSELSGDRAGLLCAQDLDTALRVEMKLAGGCR--LDKLDSEAFLAQAREYETSGD 234
Query: 183 SPVGWYIRNAQTRQLSHPLLVLRAREIDAWSRSQDYASLL 222
G ++ +HP VLRA + W + YA ++
Sbjct: 235 MRDG-VLKLLNLELQTHPFSVLRAAALTHWVDTGGYAKVI 273
>UNIPROTKB|Q887E6 [details] [associations]
symbol:PSPTO_1350 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:AE016853 GenomeReviews:AE016853_GR
RefSeq:NP_791177.1 GeneID:1182986 KEGG:pst:PSPTO_1350
PATRIC:19993942 eggNOG:NOG116503 HOGENOM:HOG000107589 OMA:LAHYLLW
ProtClustDB:CLSK522711 BioCyc:PSYR223283:GJIX-1375-MONOMER
Uniprot:Q887E6
Length = 400
Score = 147 (56.8 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 56/199 (28%), Positives = 97/199 (48%)
Query: 18 PELHQLMTEAAEILNLEAP-DLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELLTRKELQ 76
P+ +Q A L+++AP LY NA ++G+ VV + ++E L +EL
Sbjct: 65 PDAYQACETALRRLHIQAPATLYQAGDGTMNASLHYLAGEV-HVVFYGPILERLDAQELL 123
Query: 77 AVLAHELGHLKC--DH-GVWLTFANILTLGAYTIPGIGGMIAQSLEEQLFRWLRAAELTC 133
A+L HEL H + +H G +LT IL + ++ + +L+ L E+
Sbjct: 124 ALLGHELAHYRLWSEHDGDYLTAERILNHSLADLHAPASLVQTA---RLYS-LHT-EIYA 178
Query: 134 DRAALLVSQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKASSSPVGWYIRNAQ 193
DR A LV P+ I+ L+K+ G ++ N ++L+QAR D +P+
Sbjct: 179 DRGAALVVSGPEPAITSLVKVHTGIVTV----NAASYLQQARELD-GDDAPL-------- 225
Query: 194 TRQLSHPLLVLRAREIDAW 212
++ +SHP LR++ +D+W
Sbjct: 226 SQGVSHPETFLRSQALDSW 244
>UNIPROTKB|P65815 [details] [associations]
symbol:htpX "Protease HtpX homolog" species:1773
"Mycobacterium tuberculosis" [GO:0005576 "extracellular region"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] HAMAP:MF_00188 InterPro:IPR001915 InterPro:IPR022919
Pfam:PF01435 PROSITE:PS00142 GO:GO:0005576 GO:GO:0005887
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 EMBL:BX842573
eggNOG:COG0501 KO:K03799 PIR:F70549 RefSeq:NP_215077.1
RefSeq:NP_334998.1 RefSeq:YP_006513896.1 ProteinModelPortal:P65815
SMR:P65815 MEROPS:M48.004 PRIDE:P65815
EnsemblBacteria:EBMYCT00000000643 EnsemblBacteria:EBMYCT00000070383
GeneID:13318437 GeneID:887649 GeneID:924973 KEGG:mtc:MT0589
KEGG:mtu:Rv0563 KEGG:mtv:RVBD_0563 PATRIC:18122994
TubercuList:Rv0563 HOGENOM:HOG000227301 OMA:RRGAEIC
ProtClustDB:PRK03072 Uniprot:P65815
Length = 286
Score = 120 (47.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 12 VSKNQLPELHQLMTEAAEILNLEAPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELLT 71
VS+ Q P +++++ E A + P LY+ + PNA+ + + V T ++ +L
Sbjct: 66 VSELQAPAMYRIVRELATSAHQPMPRLYISDTAAPNAFATGRNPRNAAVCCTTGILRILN 125
Query: 72 RKELQAVLAHELGHL 86
+EL+AVL HEL H+
Sbjct: 126 ERELRAVLGHELSHV 140
Score = 53 (23.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 127 RAAELTCDRAALLVSQDPKVVISVLMKLAGG 157
R+ E D + +++ DP + S L K++GG
Sbjct: 203 RSREYQADESGAVLTGDPLALASALRKISGG 233
>TIGR_CMR|CHY_0108 [details] [associations]
symbol:CHY_0108 "peptidase, M48 family" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] HAMAP:MF_00188 InterPro:IPR001915
InterPro:IPR022919 Pfam:PF01435 GO:GO:0016021 GO:GO:0005886
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 eggNOG:COG0501 KO:K03799 MEROPS:M48.004
HOGENOM:HOG000227301 RefSeq:YP_358980.1 ProteinModelPortal:Q3AFV4
STRING:Q3AFV4 GeneID:3726895 KEGG:chy:CHY_0108 PATRIC:21273409
OMA:YGYWNSD BioCyc:CHYD246194:GJCN-108-MONOMER Uniprot:Q3AFV4
Length = 281
Score = 133 (51.9 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 12 VSKNQLPELHQLMTEAAEILNLEAPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELLT 71
VS+ + PEL+ ++ + + P +Y+ SP PNA+ + + V V L+ LL
Sbjct: 62 VSEAEAPELYSIVRNLSLKAGIPMPKIYITPSPQPNAFATGRNPEHAAVAVTEGLLNLLN 121
Query: 72 RKELQAVLAHELGHLK 87
R+E++ VLAHE+ H+K
Sbjct: 122 RQEIEGVLAHEIAHIK 137
>TIGR_CMR|GSU_1189 [details] [associations]
symbol:GSU_1189 "peptidase, M48 family" species:243231
"Geobacter sulfurreducens PCA" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:AE017180 GenomeReviews:AE017180_GR
MEROPS:M48.004 HOGENOM:HOG000227301 RefSeq:NP_952242.1
ProteinModelPortal:Q74DX6 GeneID:2686764 KEGG:gsu:GSU1189
PATRIC:22025150 OMA:EPSWLRT BioCyc:GSUL243231:GH27-1182-MONOMER
Uniprot:Q74DX6
Length = 316
Score = 117 (46.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 12 VSKNQLPELHQLMTEAAEILNL-EAPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELL 70
+S + P+LH ++ + A L E P ++ S P +++ SGK V V L+ LL
Sbjct: 67 LSVAEAPQLHAIVNQLARRAGLAEPPRIHYIPSSAPLVFSIG-SGKGASVAVTDGLLRLL 125
Query: 71 TRKELQAVLAHELGHLKCDHGVW-LTFANILT 101
T +EL VL HE+ H+ + W ++FA+++T
Sbjct: 126 TVRELVGVLGHEVSHIG-NSDTWVMSFADVVT 156
Score = 46 (21.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 99 ILTLGAYTIPGIGGMI---AQSLEEQLFRWL-RAAELTCDRAALLVSQDPKVVISVLMKL 154
+L LG +++P I M+ A ++ L L R E D + ++ DP + S L KL
Sbjct: 176 LLILGEWSLPWIPLMLMLFAPTISALLQLSLSRTREFEADLSGSKLTSDPAGLASALAKL 235
>UNIPROTKB|Q8EKI3 [details] [associations]
symbol:SO_0110 "Zn-dependent protease with chaperone
function" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_715752.1 ProteinModelPortal:Q8EKI3 GeneID:1168007
KEGG:son:SO_0110 PATRIC:23519917 HOGENOM:HOG000285398 OMA:HIRRNHI
ProtClustDB:CLSK905599 Uniprot:Q8EKI3
Length = 447
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 44/173 (25%), Positives = 79/173 (45%)
Query: 7 GTSVLVSKNQLPELHQLMTEAAEILNL-EAPDLYVRQSP-VPNAYTLAISGKKPFVVVHT 64
GT+V +S Q P+LH+ + L + EAP Y+ + + NA ++ ++V+ +
Sbjct: 73 GTAVEISPEQFPDLHKQYLACCKRLEIKEAPRAYLLAADGMLNALATRFL-RRNYIVLFS 131
Query: 65 SLVELLT--RKELQAVLAHELGHLKCDHGVWLTFANILTLGAYTIPGIGGMIAQSLEEQL 122
S+V+ L + + + HELGH++ +H + +L + +P IG A
Sbjct: 132 SIVDALESDKDAINFYIGHELGHIRRNH---IGKEPLLVFATW-LPLIGAAYA------- 180
Query: 123 FRWLRAAELTCDRAALLVSQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQAR 175
RA E TCD L + + + LA G ++NVD ++ Q +
Sbjct: 181 ----RACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWK-RMNVDQYIRQTQ 228
>TIGR_CMR|SO_0110 [details] [associations]
symbol:SO_0110 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001915 Pfam:PF01435 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_715752.1 ProteinModelPortal:Q8EKI3 GeneID:1168007
KEGG:son:SO_0110 PATRIC:23519917 HOGENOM:HOG000285398 OMA:HIRRNHI
ProtClustDB:CLSK905599 Uniprot:Q8EKI3
Length = 447
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 44/173 (25%), Positives = 79/173 (45%)
Query: 7 GTSVLVSKNQLPELHQLMTEAAEILNL-EAPDLYVRQSP-VPNAYTLAISGKKPFVVVHT 64
GT+V +S Q P+LH+ + L + EAP Y+ + + NA ++ ++V+ +
Sbjct: 73 GTAVEISPEQFPDLHKQYLACCKRLEIKEAPRAYLLAADGMLNALATRFL-RRNYIVLFS 131
Query: 65 SLVELLT--RKELQAVLAHELGHLKCDHGVWLTFANILTLGAYTIPGIGGMIAQSLEEQL 122
S+V+ L + + + HELGH++ +H + +L + +P IG A
Sbjct: 132 SIVDALESDKDAINFYIGHELGHIRRNH---IGKEPLLVFATW-LPLIGAAYA------- 180
Query: 123 FRWLRAAELTCDRAALLVSQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQAR 175
RA E TCD L + + + LA G ++NVD ++ Q +
Sbjct: 181 ----RACEYTCDLHGLRCCNSLRSATNAVAVLAAGVEQWK-RMNVDQYIRQTQ 228
>UNIPROTKB|Q3AAB8 [details] [associations]
symbol:CHY_2097 "Peptidase, homolog" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF05569 GO:GO:0003824 EMBL:CP000141
GenomeReviews:CP000141_GR RefSeq:YP_360916.1
ProteinModelPortal:Q3AAB8 STRING:Q3AAB8 GeneID:3727548
KEGG:chy:CHY_2097 PATRIC:21277271 eggNOG:NOG271711
ProtClustDB:CLSK2772325 BioCyc:CHYD246194:GJCN-2096-MONOMER
InterPro:IPR008756 Uniprot:Q3AAB8
Length = 312
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 19 ELHQLMTEAAEILNLEAPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELLTRKELQAV 78
+L+ ++ E E + ++ +++ +P N KP V+V + L +EL+AV
Sbjct: 126 QLNGILAELKEKMGIKK-EVFCYLAP-GNITIFTFKFDKPVVIVGEEYAKRLDFEELKAV 183
Query: 79 LAHELGHLKCDHGVWLTFANILTLGAYTIPGIGGMIAQSLEEQLFRWLRAAELTCDRAAL 138
LAHEL H+K + + ++ T + +PG+ + L LFR LRA D+ AL
Sbjct: 184 LAHELAHIKANDSLIISLCQFATYLYFFVPGLKKYFEKIL---LFRELRA-----DKVAL 235
Query: 139 --LVSQDPKVVISVLMK 153
L ++P + S L+K
Sbjct: 236 GYLGKKEP--LASALVK 250
>TIGR_CMR|CHY_2097 [details] [associations]
symbol:CHY_2097 "peptidase, homolog" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] Pfam:PF05569 GO:GO:0003824 EMBL:CP000141
GenomeReviews:CP000141_GR RefSeq:YP_360916.1
ProteinModelPortal:Q3AAB8 STRING:Q3AAB8 GeneID:3727548
KEGG:chy:CHY_2097 PATRIC:21277271 eggNOG:NOG271711
ProtClustDB:CLSK2772325 BioCyc:CHYD246194:GJCN-2096-MONOMER
InterPro:IPR008756 Uniprot:Q3AAB8
Length = 312
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 19 ELHQLMTEAAEILNLEAPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELLTRKELQAV 78
+L+ ++ E E + ++ +++ +P N KP V+V + L +EL+AV
Sbjct: 126 QLNGILAELKEKMGIKK-EVFCYLAP-GNITIFTFKFDKPVVIVGEEYAKRLDFEELKAV 183
Query: 79 LAHELGHLKCDHGVWLTFANILTLGAYTIPGIGGMIAQSLEEQLFRWLRAAELTCDRAAL 138
LAHEL H+K + + ++ T + +PG+ + L LFR LRA D+ AL
Sbjct: 184 LAHELAHIKANDSLIISLCQFATYLYFFVPGLKKYFEKIL---LFRELRA-----DKVAL 235
Query: 139 --LVSQDPKVVISVLMK 153
L ++P + S L+K
Sbjct: 236 GYLGKKEP--LASALVK 250
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 234 234 0.00087 113 3 11 22 0.39 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 599 (64 KB)
Total size of DFA: 174 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.02u 0.25s 17.27t Elapsed: 00:00:01
Total cpu time: 17.02u 0.25s 17.27t Elapsed: 00:00:01
Start: Sat May 11 03:21:45 2013 End: Sat May 11 03:21:46 2013