BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026724
(234 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255565200|ref|XP_002523592.1| RNA-binding protein, putative [Ricinus communis]
gi|223537154|gb|EEF38787.1| RNA-binding protein, putative [Ricinus communis]
Length = 359
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/237 (86%), Positives = 216/237 (91%), Gaps = 3/237 (1%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKD SKAHRGIGFITFASADSV++LM DTHELGGSTVVVDRATPKEDDFRPVGRM+HG
Sbjct: 123 MPKDHSSKAHRGIGFITFASADSVDSLMADTHELGGSTVVVDRATPKEDDFRPVGRMAHG 182
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GYGAYNAYISAATRYAALGAPTLYDHPG YG GE ++ +GKKIFVGRLPQEAT EDLR+
Sbjct: 183 GYGAYNAYISAATRYAALGAPTLYDHPGPMYGTGEPARGVGKKIFVGRLPQEATPEDLRQ 242
Query: 121 YFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
YF RFG ILDVYV PKRTGHRGFGFVTFAEE VADRVSRRSHEICG QVAIDSATP+D
Sbjct: 243 YFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEEGVADRVSRRSHEICGHQVAIDSATPID 302
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 234
DAGPS NFMMNAA +FGGYGGP+R +GRMYGSLD+DDWGYGMGS RPSR DWRYRPY
Sbjct: 303 DAGPSGNFMMNAAPSFGGYGGPLRNFGRMYGSLDYDDWGYGMGSARPSRADWRYRPY 359
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 49/230 (21%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGG 61
K++ S RG G++TFASA+ ++ + H LG + V ATPK+++ R P +++
Sbjct: 36 KERSSGRSRGFGYVTFASAEDAKSALSSEHFLGNRMLEVKVATPKQEEMRAPAKKVT--- 92
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+IFV R+P T R +
Sbjct: 93 -----------------------------------------RIFVARIPPSVTETTFRSH 111
Query: 122 FSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPL-D 177
F ++G I+D+Y+PK HRG GF+TFA D + +HE+ G V +D ATP D
Sbjct: 112 FEKYGEIIDLYMPKDHSSKAHRGIGFITFASADSVDSLMADTHELGGSTVVVDRATPKED 171
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRG 227
D P + Y Y + +D G G+G P+RG
Sbjct: 172 DFRPVGRMAHGGYGAYNAYISAATRYAALGAPTLYDHPGPMYGTGEPARG 221
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRV 156
+ +K+ V +P E E LR Y ++FG + D V K RGFG+VTFA A
Sbjct: 1 MDRKLVVLGIPWEVDTEGLREYMTKFGELDDCIVMKERSSGRSRGFGYVTFASAEDAKSA 60
Query: 157 SRRSHEICGQQVAIDSATP 175
H + + + + ATP
Sbjct: 61 LSSEHFLGNRMLEVKVATP 79
>gi|359480888|ref|XP_002282572.2| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
1 [Vitis vinifera]
gi|359480890|ref|XP_003632540.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like isoform
2 [Vitis vinifera]
gi|296082418|emb|CBI21423.3| unnamed protein product [Vitis vinifera]
Length = 359
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/237 (84%), Positives = 219/237 (92%), Gaps = 3/237 (1%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKD GSK HRGIGFITFASA+SV+NLMV+THELGGS VVVDRATPKE++FRPV R+ G
Sbjct: 123 MPKDHGSKGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEEEFRPVSRVPQG 182
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GYGAYNAYI+AATRYAALGAPTLYDHPGS YGRGES++ +GKKIFVGRLPQEA+AEDLR+
Sbjct: 183 GYGAYNAYITAATRYAALGAPTLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAEDLRQ 242
Query: 121 YFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
YF RFGRILDVYV PKR+GHRGFGFVTFAE+ VADRVSRRSHEICGQQVAIDSATPLD
Sbjct: 243 YFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLD 302
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 234
DAG S NFMM++AE FGG+GGPMRTYGRMYGSLDFDDWGYG+G GRPSR DWRYRPY
Sbjct: 303 DAGSSGNFMMDSAEPFGGFGGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 359
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 46/179 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG G++TF S + + ++ H LG + V ATPKE+ R
Sbjct: 36 KERSTGRSRGFGYVTFGSVEDAKKVLSSEHFLGNRMLEVKVATPKEEMMR---------- 85
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A I TR IFV R+P R YF
Sbjct: 86 ----APIKKVTR-----------------------------IFVARIPDSVNEAAFRSYF 112
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
+G I D+Y+PK GHRG GF+TFA D + +HE+ G V +D ATP ++
Sbjct: 113 ETYGEITDLYMPKDHGSKGHRGIGFITFASAESVDNLMVETHELGGSAVVVDRATPKEE 171
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSR 158
K+ V +P + + LR Y S+FG + DV V K TG RGFG+VTF A +V
Sbjct: 3 NKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTFGSVEDAKKVLS 62
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 63 SEHFLGNRMLEVKVATPKEE 82
>gi|224094314|ref|XP_002310138.1| predicted protein [Populus trichocarpa]
gi|222853041|gb|EEE90588.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/246 (81%), Positives = 214/246 (86%), Gaps = 12/246 (4%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKD SKAHRGIGFIT+ASADSV+NLM +THELGGSTVVVDRATPKEDDFRP GRM+ G
Sbjct: 122 MPKDHSSKAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAPG 181
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GYGAYNAYISAATRYAALGAPTLYDHPG FYGRGESS+ +GKKIFVGRLPQEA+AEDLR+
Sbjct: 182 GYGAYNAYISAATRYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASAEDLRQ 241
Query: 121 YFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
YF RFG ILDVYV PKRTGHRGFGFVTFAE+ VADRVSRRSHEICG QVAIDSATP+D
Sbjct: 242 YFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPID 301
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDD---------WGYGMGSGRPSRGD 228
DAGPS NFMM+ E FG Y GPMR +GRMYG+LD+DD WGYGMGS RPSR D
Sbjct: 302 DAGPSGNFMMSGPEPFGSYAGPMRNFGRMYGTLDYDDASAYMVPSKWGYGMGSARPSRAD 361
Query: 229 WRYRPY 234
WRYRPY
Sbjct: 362 WRYRPY 367
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 52/198 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TF SA+ + ++ H LG + V ATPKE+
Sbjct: 36 KERSSGRSRGFGYVTFVSAEDAKAVLSSEHFLGKRMLEVKVATPKEE------------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ AP+ + +IFV R+P T R +F
Sbjct: 83 ---------------MRAPS----------------KKATRIFVARIPPSVTETTFRSHF 111
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
++G I+D+Y+PK HRG GF+T+A D + +HE+ G V +D ATP +D
Sbjct: 112 EKYGEIIDLYMPKDHSSKAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKED- 170
Query: 180 GPSQNFMMNAAETFGGYG 197
+F N GGYG
Sbjct: 171 ----DFRPNGRMAPGGYG 184
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRV 156
+ +K+ V +P E E LR Y ++FG + D V K RGFG+VTF A V
Sbjct: 1 MDRKLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60
Query: 157 SRRSHEICGQQVAIDSATPLDDA-GPSQN 184
H + + + + ATP ++ PS+
Sbjct: 61 LSSEHFLGKRMLEVKVATPKEEMRAPSKK 89
>gi|224084344|ref|XP_002307266.1| predicted protein [Populus trichocarpa]
gi|222856715|gb|EEE94262.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/246 (80%), Positives = 215/246 (87%), Gaps = 12/246 (4%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKD SKAHRGIGFIT+ASADSV++LM +THELGGSTVVVDRATPKEDDFRP+ R + G
Sbjct: 122 MPKDHSSKAHRGIGFITYASADSVDSLMAETHELGGSTVVVDRATPKEDDFRPIARTAPG 181
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GYGAYNAYISAATRYAALGAPTLYDHPG FYGRGESS+ +GKKIFVGRLPQEA+ EDLR+
Sbjct: 182 GYGAYNAYISAATRYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASTEDLRQ 241
Query: 121 YFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
YF RFG I+DVYV PKRTGHRGFGFVTFAE+ VADRVSRRSHEICG QVAIDSATP+D
Sbjct: 242 YFGRFGHIIDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPID 301
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDD---------WGYGMGSGRPSRGD 228
DAGPS NFMM+A E FGGYGGPMR +GRMYG+LD+DD WGYGMGS RPSR D
Sbjct: 302 DAGPSGNFMMSAPEPFGGYGGPMRNFGRMYGTLDYDDAGAYMVPSKWGYGMGSARPSRAD 361
Query: 229 WRYRPY 234
WRYRPY
Sbjct: 362 WRYRPY 367
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 52/198 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TF SA+ + ++ H LG + + ATPKE+
Sbjct: 36 KERSSGRSRGFGYVTFVSAEDAKAVLSGEHFLGKRMLEIKVATPKEE------------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ APT + +IFV R+P T R +F
Sbjct: 83 ---------------MRAPT----------------KKATRIFVARIPPSVTETTFRSHF 111
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
++G I+D+Y+PK HRG GF+T+A D + +HE+ G V +D ATP +D
Sbjct: 112 EKYGEIIDLYMPKDHSSKAHRGIGFITYASADSVDSLMAETHELGGSTVVVDRATPKED- 170
Query: 180 GPSQNFMMNAAETFGGYG 197
+F A GGYG
Sbjct: 171 ----DFRPIARTAPGGYG 184
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRV 156
+ +K+ + +P E E LR+Y S+FG + D V K RGFG+VTF A V
Sbjct: 1 MSQKLVILGIPWEIDTEGLRQYMSKFGELEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + I ATP ++
Sbjct: 61 LSGEHFLGKRMLEIKVATPKEE 82
>gi|356496896|ref|XP_003517301.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 362
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/242 (81%), Positives = 215/242 (88%), Gaps = 10/242 (4%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRM--- 57
MPKDQGSK HRGIGFITFASADSVENLM +THELGGS VVVDRATPK+DDF+P+GRM
Sbjct: 123 MPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPIGRMPLP 182
Query: 58 --SHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATA 115
+ GGYGAYNAYISAATRYAALGAPTLYD PG YGRG+ S+R KKIFVGRLP EAT+
Sbjct: 183 PPTQGGYGAYNAYISAATRYAALGAPTLYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATS 242
Query: 116 EDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 172
+DLR+YF RFGRILDVYVP KRTGHRGFGFVTFAE+ VADRVSRRSHEICG QVAIDS
Sbjct: 243 DDLRQYFGRFGRILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDS 302
Query: 173 ATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYR 232
ATP+DDAGPS NFMMN+ E+FGGYGGP+R+YGRMYGSLDFDDWGYG+ GRPSR DWRYR
Sbjct: 303 ATPVDDAGPSGNFMMNSMESFGGYGGPVRSYGRMYGSLDFDDWGYGI--GRPSRADWRYR 360
Query: 233 PY 234
PY
Sbjct: 361 PY 362
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 97/233 (41%), Gaps = 53/233 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG G++TFAS D + ++ H LG T+ V ATPKE+ PV +++
Sbjct: 37 KERSTGRSRGFGYVTFASVDDAKEVLSSEHILGNRTLEVKVATPKEEMRAPVKKVT---- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+PQ T R +F
Sbjct: 93 ----------------------------------------RIFVARIPQSVTEATFRSHF 112
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
++G I D+Y+PK G HRG GF+TFA + + +HE+ G V +D ATP DD
Sbjct: 113 EKYGEITDLYMPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDD 172
Query: 180 GPSQNFMMNAAETFGGYGG------PMRTYGRMYGSLDFDDWGYGMGSGRPSR 226
M T GGYG Y + +D G G G PSR
Sbjct: 173 FKPIGRMPLPPPTQGGYGAYNAYISAATRYAALGAPTLYDQPGPIYGRGDPSR 225
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + E LR Y S+FG + D V K TG RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDIDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 64 SEHILGNRTLEVKVATPKEE 83
>gi|356541820|ref|XP_003539370.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 365
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/246 (79%), Positives = 212/246 (86%), Gaps = 15/246 (6%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSH- 59
MPKDQGSK HRGIGFITFASADSVENLM +THELGGS VVVDRATPK+DDF+P+GRM
Sbjct: 123 MPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPMGRMPPP 182
Query: 60 -------GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQE 112
GGYGAYNAYISAATRYAALGAPTLYDHPG YGRG++ +R KKIFVGRLP E
Sbjct: 183 PPPPPQGGGYGAYNAYISAATRYAALGAPTLYDHPGPIYGRGDA-RRTSKKIFVGRLPPE 241
Query: 113 ATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVA 169
AT++DLR+YF RFGRILDVYVP KR GHRGFGFVTFAE+ ADRVSRRSHEICG VA
Sbjct: 242 ATSDDLRQYFGRFGRILDVYVPRDPKRAGHRGFGFVTFAEDGAADRVSRRSHEICGHPVA 301
Query: 170 IDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSR-GD 228
IDSATP+DDAGPS NFMMN+ E+FGGYGGP+R+YGRMYGSLDFDDWGYG+ GRPSR D
Sbjct: 302 IDSATPVDDAGPSGNFMMNSMESFGGYGGPVRSYGRMYGSLDFDDWGYGI--GRPSRAAD 359
Query: 229 WRYRPY 234
WRYRPY
Sbjct: 360 WRYRPY 365
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 47/179 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG G++TFAS D + ++ H +G T+ V ATPKE+ PV +++
Sbjct: 37 KERSTGRSRGFGYVTFASVDDAKEVLSSEHIIGNRTLEVKVATPKEEMRAPVKKVT---- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+PQ T R +F
Sbjct: 93 ----------------------------------------RIFVARIPQSVTEATFRSHF 112
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
++G I D+Y+PK G HRG GF+TFA + + +HE+ G V +D ATP DD
Sbjct: 113 EKYGEITDLYMPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDD 171
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + E LR Y S+FG + D V K TG RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 159 RSHEICGQQVAIDSATPLDD 178
H I + + + ATP ++
Sbjct: 64 SEHIIGNRTLEVKVATPKEE 83
>gi|449460598|ref|XP_004148032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
gi|449502733|ref|XP_004161727.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cucumis
sativus]
Length = 377
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/256 (77%), Positives = 215/256 (83%), Gaps = 22/256 (8%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSH- 59
MPKDQGSK HRGIGFITFAS+DSVENLM DTHELGGS VVVDRATPK+DDFRP+G+M
Sbjct: 122 MPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQG 181
Query: 60 -----GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESS-----QRIGKKIFVGRL 109
GGYGAYNAYISAATRYAALGAPTLYDHPGS YG + + +GKKIFVGRL
Sbjct: 182 GGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGSMSPTVPLEFRGMGKKIFVGRL 241
Query: 110 PQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQ 166
PQEA+A+DLR+YF RFGRILDVYV PKR+GHRGFGFVTFAE+ VADRVSRRSHEICGQ
Sbjct: 242 PQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQ 301
Query: 167 QVAIDSATPLDD-------AGPSQNFMMN-AAETFGGYGGPMRTYGRMYGSLDFDDWGYG 218
QVAIDSATPLDD +G S FMMN AA++FGGY GPMRTYGRMYGSLDFDDWGYG
Sbjct: 302 QVAIDSATPLDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYG 361
Query: 219 MGSGRPSRGDWRYRPY 234
+G GRPSR DWRYRPY
Sbjct: 362 IGGGRPSRADWRYRPY 377
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 47/179 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG G++TFA+ + +N + H LG + V ATPKE+ P R++
Sbjct: 36 KERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVT---- 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+ Q T R +F
Sbjct: 92 ----------------------------------------RIFVARISQTVTEAAFRSHF 111
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
++G I D+Y+PK G HRG GF+TFA + + +HE+ G V +D ATP DD
Sbjct: 112 EKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDD 170
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRV 156
+ +K+ V +P + E LR Y S+FG + D V K TG RGFG+VTFA + A
Sbjct: 1 MDRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNA 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 61 LSSEHFLGNRMMEVKVATPKEE 82
>gi|217074298|gb|ACJ85509.1| unknown [Medicago truncatula]
gi|388503058|gb|AFK39595.1| unknown [Medicago truncatula]
Length = 397
Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 181/235 (77%), Positives = 201/235 (85%), Gaps = 5/235 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKDQGSK HRGIGFITF +A+SVENLM +THELGGS VVVDRATPKEDD +P GRMS G
Sbjct: 123 MPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDDVKPTGRMSQG 182
Query: 61 G-YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLR 119
G YGAYNAYIS ATRYAALGAPTLYDHPG YGRGE +RI KKIFVGRLP EA +EDLR
Sbjct: 183 GGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRLPPEANSEDLR 242
Query: 120 RYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPL 176
+YF RFGRI DV + PKRTGHRGFGFVTFA+E VADRVS R HEICG +VAIDSATP+
Sbjct: 243 QYFGRFGRIEDVCIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAIDSATPV 302
Query: 177 DDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWR 230
DDA PS NFMM N+ E+FGGYGGP+R+YGRMYG LD+DDWGYG+ S RPSR +++
Sbjct: 303 DDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPSRAEYQ 357
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 95/231 (41%), Gaps = 53/231 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG G++TFAS D + ++ H LG + V ATPKE+ P +++
Sbjct: 37 KERSTGRSRGFGYVTFASVDDAKEVLSGEHVLGDRMLEVKVATPKEEMRAPAKKVT---- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+P T E R +F
Sbjct: 93 ----------------------------------------RIFVARIPPSVTEETFRSHF 112
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPL-DD 178
++G I D+ +PK G HRG GF+TF + + +HE+ G V +D ATP DD
Sbjct: 113 EKYGDITDLCMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKEDD 172
Query: 179 AGPSQNFMMNAAETFGGYGGPMRT---YGRMYGSLDFDDWGYGMGSGRPSR 226
P+ M+ +G Y + T Y + +D G G G P R
Sbjct: 173 VKPTGR--MSQGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGRGEPRR 221
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + E L+ Y S++G + D V K TG RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 64 GEHVLGDRMLEVKVATPKEE 83
>gi|357482897|ref|XP_003611735.1| RNA-binding protein [Medicago truncatula]
gi|355513070|gb|AES94693.1| RNA-binding protein [Medicago truncatula]
Length = 403
Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 190/281 (67%), Positives = 207/281 (73%), Gaps = 47/281 (16%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPK--EDDFRPVGRMS 58
MPKDQGSK HRGIGFITF +A+SVENLM +THELGGS VVVDRATPK EDD +P GRMS
Sbjct: 123 MPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKAREDDVKPTGRMS 182
Query: 59 HGG-YGAYNAYISAATRYAALGAPTLYDHPGSFYG----RGESSQRIGKKIFVGRLPQEA 113
GG YGAYNAYIS ATRYAALGAPTLYDHPG YG RGE +RI KKIFVGRLP EA
Sbjct: 183 QGGGYGAYNAYISTATRYAALGAPTLYDHPGPIYGSKHGRGEPRRRISKKIFVGRLPPEA 242
Query: 114 TAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAI 170
+EDLR+YF RFGRI DVY+P KRTGHRGFGFVTFA+E VADRVS R HEICG +VAI
Sbjct: 243 NSEDLRQYFGRFGRIEDVYIPRDPKRTGHRGFGFVTFADEGVADRVSLRPHEICGHEVAI 302
Query: 171 DSATPLDDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS-------- 221
DSATP+DDA PS NFMM N+ E+FGGYGGP+R+YGRMYG LD+DDWGYG+ S
Sbjct: 303 DSATPVDDARPSGNFMMNNSMESFGGYGGPVRSYGRMYGGLDYDDWGYGVPSVRPSRAEY 362
Query: 222 ----------------------------GRPSRGDWRYRPY 234
GRPSR DWRYRPY
Sbjct: 363 QEQLGRPSRADYQEQIGRPSRADYQEHIGRPSRADWRYRPY 403
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 91/214 (42%), Gaps = 53/214 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG G++TFAS D + ++ H LG + V ATPKE+ P +++
Sbjct: 37 KERSTGRSRGFGYVTFASVDDAKEVLSGEHVLGDRMLEVKVATPKEEMRAPAKKVT---- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+P T E R +F
Sbjct: 93 ----------------------------------------RIFVARIPPSVTEETFRSHF 112
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPL--- 176
++G I D+Y+PK G HRG GF+TF + + +HE+ G V +D ATP
Sbjct: 113 EKYGDITDLYMPKDQGSKMHRGIGFITFGNAESVENLMSETHELGGSAVVVDRATPKARE 172
Query: 177 DDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
DD P+ M+ +G Y + T R Y +L
Sbjct: 173 DDVKPTGR--MSQGGGYGAYNAYISTATR-YAAL 203
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + E L+ Y S++G + D V K TG RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWDVDTEGLKEYMSKYGELEDCIVMKERSTGRSRGFGYVTFASVDDAKEVLS 63
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 64 GEHVLGDRMLEVKVATPKEE 83
>gi|358349448|ref|XP_003638749.1| RNA-binding protein [Medicago truncatula]
gi|355504684|gb|AES85887.1| RNA-binding protein [Medicago truncatula]
Length = 371
Score = 348 bits (894), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 178/249 (71%), Positives = 199/249 (79%), Gaps = 15/249 (6%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRM--S 58
MPKD+GSK HRGIGFITFA+ADSVENLM +THELGGS VVVDRATPKEDDF+P+GR
Sbjct: 123 MPKDRGSKTHRGIGFITFATADSVENLMKETHELGGSDVVVDRATPKEDDFKPIGRTRTP 182
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDL 118
GY AY+ YI A+TRYAALGAPT+YD P S YGRGE ++ I KKIFVGRLP EAT EDL
Sbjct: 183 QLGYSAYSTYIPASTRYAALGAPTMYDRPSSIYGRGEPARGISKKIFVGRLPPEATTEDL 242
Query: 119 RRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
R YF RFG ILDVY+P KR GHRGFGFVTFA+ VADRVSRR HEICGQ+VAIDSA P
Sbjct: 243 RLYFGRFGHILDVYIPRDVKRPGHRGFGFVTFADSGVADRVSRRPHEICGQEVAIDSAAP 302
Query: 176 LDDAGPSQNFMMNAAETFGGYGG---------PMRTYGRMYGSLDFDDWGYGMGSGRPSR 226
LD+AGPS N M+N+ ++F GYGG P+R+YGRMY SLDFDD GYG+ S RPSR
Sbjct: 303 LDEAGPSGNTMLNSMDSFRGYGGPVRPYFDESPVRSYGRMYNSLDFDDLGYGVASRRPSR 362
Query: 227 -GDWRYRPY 234
DWRYRPY
Sbjct: 363 TTDWRYRPY 371
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 47/179 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG G++TFAS D +N++ H LG T+ V ATPKE+ PV +++
Sbjct: 37 KERSTGRSRGFGYVTFASVDDAKNVLSSEHSLGDRTLEVKVATPKEEMRAPVKKVT---- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+ T E R +F
Sbjct: 93 ----------------------------------------RIFVARIAPSVTEETFRSHF 112
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
++G I D+Y+PK G HRG GF+TFA + + + +HE+ G V +D ATP +D
Sbjct: 113 EKYGDITDLYMPKDRGSKTHRGIGFITFATADSVENLMKETHELGGSDVVVDRATPKED 171
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + L+ Y S+FG + D V K TG RGFG+VTFA A V
Sbjct: 4 RKLVVLGIPWHVDTDGLKEYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKNVLS 63
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 64 SEHSLGDRTLEVKVATPKEE 83
>gi|255641298|gb|ACU20926.1| unknown [Glycine max]
gi|255642525|gb|ACU21526.1| unknown [Glycine max]
Length = 213
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/215 (79%), Positives = 188/215 (87%), Gaps = 10/215 (4%)
Query: 28 MVDTHELGGSTVVVDRATPKEDDFRPVGRM-----SHGGYGAYNAYISAATRYAALGAPT 82
M +THELGGS VVVDRATPK+DDF+ +GRM + GGYGAYNAYISAATRYAALGAPT
Sbjct: 1 MSETHELGGSAVVVDRATPKDDDFKSIGRMPLPPPTLGGYGAYNAYISAATRYAALGAPT 60
Query: 83 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGH 139
LYD PG YGRG+ S+R KKIFVGRLP EAT++DLR+YF RFGRILDVYVP KRTGH
Sbjct: 61 LYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATSDDLRQYFGRFGRILDVYVPRDPKRTGH 120
Query: 140 RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 199
RGFGFVTFAE+ VADRVSRRSHEICG QVAIDSATP+DDAGPS NFMMN+ E+FGGYGGP
Sbjct: 121 RGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPVDDAGPSGNFMMNSMESFGGYGGP 180
Query: 200 MRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRPY 234
+R+YGRMYGSLDFDDWGYG+ GRPSR DWRYRPY
Sbjct: 181 VRSYGRMYGSLDFDDWGYGI--GRPSRADWRYRPY 213
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED-----DFRPVG 55
+P+D HRG GF+TFA + + +HE+ G V +D ATP +D +F
Sbjct: 111 VPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPVDDAGPSGNFMMNS 170
Query: 56 RMSHGGYG 63
S GGYG
Sbjct: 171 MESFGGYG 178
>gi|147782862|emb|CAN61300.1| hypothetical protein VITISV_011315 [Vitis vinifera]
Length = 335
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/234 (74%), Positives = 192/234 (82%), Gaps = 29/234 (12%)
Query: 3 KDQGSKAHRGIGFITFASA-------------------DSVENLMVDTHELGGSTVVVDR 43
+D GSK HRGIGFITFASA SV+NLMV+THELGGSTVV
Sbjct: 106 QDHGSKGHRGIGFITFASAGQYILNFPWHLIFNILNDAKSVDNLMVETHELGGSTVV--- 162
Query: 44 ATPKEDDFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKK 103
E++FRPV R+ GGYGAYNAYI+AATRYAALGAPTLYDHPGS YGRGES++ +GKK
Sbjct: 163 ----EEEFRPVSRVPQGGYGAYNAYITAATRYAALGAPTLYDHPGSVYGRGESTRAMGKK 218
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS 160
IFVGRLPQEA+AEDLR+YF RFGRILDVYV PKR+GHRGFGFVTFAE+ VADRVSRRS
Sbjct: 219 IFVGRLPQEASAEDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRS 278
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDD 214
HEICGQQVAIDSATPLDDAG S NFMM++AE FGG+GGPMRTYGRMYGSLDFDD
Sbjct: 279 HEICGQQVAIDSATPLDDAGSSGNFMMDSAEPFGGFGGPMRTYGRMYGSLDFDD 332
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED 49
+PKD HRG GF+TFA + + +HE+ G V +D ATP +D
Sbjct: 248 VPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDD 296
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTF 147
K+ V +P + + LR Y S+FG + DV V K TG RGFG+VTF
Sbjct: 3 NKLVVLGIPWDVDTDGLRDYMSKFGELKDVIVMKERSTGRSRGFGYVTF 51
>gi|388511899|gb|AFK44011.1| unknown [Lotus japonicus]
Length = 220
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 187/220 (85%), Gaps = 13/220 (5%)
Query: 28 MVDTHELGGSTVVVDRATPKEDDFRPVGRM---------SHGGYGAYNAYISAATRYAAL 78
M +THEL GSTVVVDRATPKEDDF+P+GRM S GGYGAYNAYISA TRYAAL
Sbjct: 1 MKETHELEGSTVVVDRATPKEDDFKPIGRMPQGGSMGRMSQGGYGAYNAYISATTRYAAL 60
Query: 79 GAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---K 135
GAPTLYD+PGS YGRGE ++ +GKKIFVG LPQEAT EDLR+YF RFG ILDVY+P K
Sbjct: 61 GAPTLYDNPGSVYGRGEPAREVGKKIFVGHLPQEATTEDLRQYFGRFGHILDVYIPRDAK 120
Query: 136 RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
R+GHRGFGFVTFAE+ VADRV+RR HEICG QVAIDSATPLDDAGPS NFM+N+ ++FGG
Sbjct: 121 RSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAIDSATPLDDAGPSGNFMLNSMDSFGG 180
Query: 196 YGGPMRTYGRMYGSLDFDDWGYGMGSGR-PSRGDWRYRPY 234
+GGP+R YGRMYGSLD+DDWGYG+ GR PSR DWRYRPY
Sbjct: 181 FGGPVRPYGRMYGSLDYDDWGYGVPRGRPPSRADWRYRPY 220
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED 49
+P+D HRG GF+TFA + + HE+ G V +D ATP +D
Sbjct: 115 IPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAIDSATPLDD 163
>gi|297798166|ref|XP_002866967.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312803|gb|EFH43226.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/259 (69%), Positives = 199/259 (76%), Gaps = 25/259 (9%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRP----VGR 56
MPKD SK HRGIGFITF+SADSVE+LM DTH+LGG+TV VDRATPKEDD P V R
Sbjct: 122 MPKDHNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVAR 181
Query: 57 MSH-------------GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR-IGK 102
MS GGYGAY+AYISAATRYAALGAPTLYD+P FYGRGE + R IG
Sbjct: 182 MSRPPVAVAGGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPAMFYGRGEPTTRGIGN 241
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIFVGRLPQEA+ +DLR YF RFGRI D Y+PK R+GHRGFGFVTFAE VAD V+RR
Sbjct: 242 KIFVGRLPQEASVDDLREYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADCVARR 301
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAA----ETFGGYGGPMRTYGRMYGSLDFDDW 215
SHEICGQ+VAIDSATPLD+AGPS + + E FGGYGGPMRT+GRMYG + DDW
Sbjct: 302 SHEICGQEVAIDSATPLDEAGPSASGSSVLSSSRPEYFGGYGGPMRTFGRMYGGMSLDDW 361
Query: 216 GYGMGSGRPSRGDWRYRPY 234
GYGM + RPSR DWRYRPY
Sbjct: 362 GYGMPNARPSRSDWRYRPY 380
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 47/184 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG G++TFAS++ +N + H LG + V ATPKE+ +P +++
Sbjct: 36 KDRSTGRSRGFGYVTFASSEDAKNALKGEHFLGNRILEVKVATPKEEMRQPAKKVT---- 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+P + D R +F
Sbjct: 92 ----------------------------------------RIFVARIPSSVSESDFRSHF 111
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
R+G I D+Y+PK HRG GF+TF+ + + +H++ G VA+D ATP +D
Sbjct: 112 ERYGEITDLYMPKDHNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDD 171
Query: 180 GPSQ 183
P +
Sbjct: 172 HPPR 175
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + ++ L+ Y S+FG + D V K TG RGFG+VTFA A +
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASSEDAKNALK 62
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 63 GEHFLGNRILEVKVATPKEE 82
>gi|18419943|ref|NP_568011.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|238481137|ref|NP_001154290.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15081787|gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana]
gi|23308345|gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis thaliana]
gi|332661324|gb|AEE86724.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332661325|gb|AEE86725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 379
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/258 (69%), Positives = 202/258 (78%), Gaps = 24/258 (9%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRP----VGR 56
MPKD SK HRGIGFITF+SADSVE+LM DTH+LGG+TV VDRATPKEDD P V R
Sbjct: 122 MPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVAR 181
Query: 57 MSH------------GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR-IGKK 103
MS GGYGAY+AYISAATRYAALGAPTLYD+P +FYGRGE + R IG K
Sbjct: 182 MSRPPVAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGNK 241
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRS 160
IFVGRLPQEA+ +DLR YF RFG I D Y+PK R+GHRGFGFVTFAE VADRV+RRS
Sbjct: 242 IFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRS 301
Query: 161 HEICGQQVAIDSATPLDDAGPS--QNFMMNAA--ETFGGYGGPMRTYGRMYGSLDFDDWG 216
HEICGQ+VAIDSATPLD+AGPS + M++++ E FGGYGGPMR +GRMYG + DDWG
Sbjct: 302 HEICGQEVAIDSATPLDEAGPSAGASSMLSSSRPEYFGGYGGPMRAFGRMYGGMSLDDWG 361
Query: 217 YGMGSGRPSRGDWRYRPY 234
YGM + RPSR D RYRPY
Sbjct: 362 YGMPNARPSRPDRRYRPY 379
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 47/184 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG G++TFASA+ +N + H LG + V ATPKE+ +P +++
Sbjct: 36 KDRSTGRSRGFGYVTFASAEDAKNALKGEHFLGNRILEVKVATPKEEMRQPAKKVT---- 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+P + D R +F
Sbjct: 92 ----------------------------------------RIFVARIPSSVSESDFRSHF 111
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
R+G I D+Y+PK HRG GF+TF+ + + +H++ G VA+D ATP +D
Sbjct: 112 ERYGEITDLYMPKDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDD 171
Query: 180 GPSQ 183
P +
Sbjct: 172 HPPR 175
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + ++ L+ Y S+FG + D V K TG RGFG+VTFA A +
Sbjct: 3 RKLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALK 62
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 63 GEHFLGNRILEVKVATPKEE 82
>gi|388511807|gb|AFK43965.1| unknown [Lotus japonicus]
Length = 191
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/185 (77%), Positives = 163/185 (88%), Gaps = 4/185 (2%)
Query: 54 VGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEA 113
+GRMS GGYGAYNAYISA TRYAALGAPTLYD+PGS YGRGE ++ +GKKIFVG LPQEA
Sbjct: 7 MGRMSQGGYGAYNAYISATTRYAALGAPTLYDNPGSVYGRGEPAREVGKKIFVGHLPQEA 66
Query: 114 TAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAI 170
T EDLR+YF RFG ILDVY+P KR+GHRGFGFVTFAE+ VADRV+RR HEICG QVAI
Sbjct: 67 TTEDLRQYFGRFGHILDVYIPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAI 126
Query: 171 DSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGR-PSRGDW 229
DSATPLDDAGPS NFM+N+ ++FGG+GGP+R YGRMYGSLD+DDWGYG+ GR PSR DW
Sbjct: 127 DSATPLDDAGPSGNFMLNSMDSFGGFGGPVRPYGRMYGSLDYDDWGYGVPRGRPPSRADW 186
Query: 230 RYRPY 234
RY+PY
Sbjct: 187 RYKPY 191
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED 49
+P+D HRG GF+TFA + + HE+ G V +D ATP +D
Sbjct: 86 IPRDAKRSGHRGFGFVTFAEDGVADRVARRPHEICGHQVAIDSATPLDD 134
>gi|15290173|dbj|BAB63863.1| putative RNA-binding like protein [Oryza sativa Japonica Group]
Length = 523
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 185/244 (75%), Gaps = 13/244 (5%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMS 58
MPK+ GSK HRGIGFITF SA+SV+++M D+HEL G+TVVVDRATPK+++ R P S
Sbjct: 283 MPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGAS 342
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRG---ESSQRIG-KKIFVGRLPQEAT 114
GGYGAYNAYISAATRYAALGAPTLYDHPGS YGRG SSQ +G KKIFVGRLPQEA
Sbjct: 343 QGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGRGGYYGSSQGMGNKKIFVGRLPQEAN 402
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAID 171
EDLR YF +FGRI+D Y+ PKR+GHRGFGFVTFA+E VADRV+RRSHEI G +VAID
Sbjct: 403 TEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAID 462
Query: 172 SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD-DWGYGMGSGRPSRGDWR 230
+A PL+ G S M + +G YG MRTYGR +D+D +G+ S SR DWR
Sbjct: 463 TAAPLE--GDSGGGYMEPMDLYGAYGS-MRTYGRFCSGIDYDYGYGHSGSSSSRSRADWR 519
Query: 231 YRPY 234
YRPY
Sbjct: 520 YRPY 523
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 91/213 (42%), Gaps = 59/213 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TF+SAD +N++ H LG T+ V ATPKE+ M G
Sbjct: 196 KERSSGRSRGFGYVTFSSADDAKNVLECEHVLGNRTLEVKIATPKEE-------MKSQG- 247
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +IFV R+PQ RR+F
Sbjct: 248 -----------------------------------SKKATRIFVARIPQSVDESMFRRHF 272
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
+G I D+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP D+
Sbjct: 273 EAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEE 332
Query: 180 -------GPSQ------NFMMNAAETFGGYGGP 199
G SQ N ++AA + G P
Sbjct: 333 VRYPPSRGASQGGYGAYNAYISAATRYAALGAP 365
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 109 LPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRSHEICG 165
+P + E LR Y +FG + D V K RGFG+VTF+ A V H +
Sbjct: 170 IPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNVLECEHVLGN 229
Query: 166 QQVAIDSATPLDD 178
+ + + ATP ++
Sbjct: 230 RTLEVKIATPKEE 242
>gi|226499886|ref|NP_001151590.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195647980|gb|ACG43458.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
Length = 462
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 174/219 (79%), Gaps = 8/219 (3%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSH 59
MPK+ GSK HRGIGFITF SA+SV+++M ++HEL G+TVVVDRATPKE+D R P R S
Sbjct: 225 MPKEHGSKGHRGIGFITFQSAESVDSIMQESHELDGTTVVVDRATPKEEDVRYPPSRPSQ 284
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAED 117
GGYGAYNAYISAATRYA LGAPTLYDHPGS YGRG SSQ +GKKIFVGRLPQEA +D
Sbjct: 285 GGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGYYGSSQAVGKKIFVGRLPQEANTDD 344
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSAT 174
LR YF RFGRI+D Y+ PKR+GHRGFGFVTFA+E VA+RVSRRSHEI G +VAID+A
Sbjct: 345 LRHYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVAERVSRRSHEILGHEVAIDTAA 404
Query: 175 PLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 213
PL++ + ++ + +G YG MR++GR G LD++
Sbjct: 405 PLENDSAGGGY-IDPMDLYGAYGS-MRSFGRFCGGLDYN 441
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 98/226 (43%), Gaps = 64/226 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+++ S RG G++TFASAD +N++ H LG T+ V ATPKE+
Sbjct: 138 EERSSGRSRGFGYVTFASADDAKNVLDCEHVLGSRTLEVKIATPKEE------------- 184
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
S T+ A +IFV R+PQ RR+F
Sbjct: 185 -----MKSQGTKKAT-------------------------RIFVARIPQSVDESMFRRHF 214
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD- 178
FG ILD+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP ++
Sbjct: 215 EAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQESHELDGTTVVVDRATPKEED 274
Query: 179 -----AGPSQ------NFMMNAAETFGGYGGPM------RTYGRMY 207
+ PSQ N ++AA + G P YGR Y
Sbjct: 275 VRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGY 320
>gi|297598312|ref|NP_001045380.2| Os01g0945800 [Oryza sativa Japonica Group]
gi|57899379|dbj|BAD88026.1| RNA-binding like protein [Oryza sativa Japonica Group]
gi|215686359|dbj|BAG87620.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706318|dbj|BAG93174.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674065|dbj|BAF07294.2| Os01g0945800 [Oryza sativa Japonica Group]
Length = 363
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 159/244 (65%), Positives = 185/244 (75%), Gaps = 13/244 (5%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMS 58
MPK+ GSK HRGIGFITF SA+SV+++M D+HEL G+TVVVDRATPK+++ R P S
Sbjct: 123 MPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGAS 182
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRG---ESSQRIG-KKIFVGRLPQEAT 114
GGYGAYNAYISAATRYAALGAPTLYDHPGS YGRG SSQ +G KKIFVGRLPQEA
Sbjct: 183 QGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGRGGYYGSSQGMGNKKIFVGRLPQEAN 242
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAID 171
EDLR YF +FGRI+D Y+ PKR+GHRGFGFVTFA+E VADRV+RRSHEI G +VAID
Sbjct: 243 TEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHEILGHEVAID 302
Query: 172 SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD-DWGYGMGSGRPSRGDWR 230
+A PL+ G S M + +G YG MRTYGR +D+D +G+ S SR DWR
Sbjct: 303 TAAPLE--GDSGGGYMEPMDLYGAYGS-MRTYGRFCSGIDYDYGYGHSGSSSSRSRADWR 359
Query: 231 YRPY 234
YRPY
Sbjct: 360 YRPY 363
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 91/213 (42%), Gaps = 59/213 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TF+SAD +N++ H LG T+ V ATPKE+ M G
Sbjct: 36 KERSSGRSRGFGYVTFSSADDAKNVLECEHVLGNRTLEVKIATPKEE-------MKSQG- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +IFV R+PQ RR+F
Sbjct: 88 -----------------------------------SKKATRIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
+G I D+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP D+
Sbjct: 113 EAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEE 172
Query: 180 -------GPSQ------NFMMNAAETFGGYGGP 199
G SQ N ++AA + G P
Sbjct: 173 VRYPPSRGASQGGYGAYNAYISAATRYAALGAP 205
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E LR Y +FG + D V K RGFG+VTF+ A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 61 LECEHVLGNRTLEVKIATPKEE 82
>gi|224030865|gb|ACN34508.1| unknown [Zea mays]
gi|414878724|tpg|DAA55855.1| TPA: heterogeneous nuclear ribonucleoprotein 27C isoform 1 [Zea
mays]
gi|414878725|tpg|DAA55856.1| TPA: heterogeneous nuclear ribonucleoprotein 27C isoform 2 [Zea
mays]
Length = 360
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/219 (66%), Positives = 174/219 (79%), Gaps = 8/219 (3%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSH 59
MPK+ GSK HRGIGFITF SA+SV+++M ++HEL G+TVVVDRATPKE+D R P R S
Sbjct: 123 MPKEHGSKGHRGIGFITFQSAESVDSIMQESHELDGTTVVVDRATPKEEDVRYPPSRPSQ 182
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAED 117
GGYGAYNAYISAATRYA LGAPTLYDHPGS YGRG SSQ +GKKIFVGRLPQEA +D
Sbjct: 183 GGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGYYGSSQAVGKKIFVGRLPQEANTDD 242
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSAT 174
LR YF RFGRI+D Y+ PKR+GHRGFGFVTFA+E VA+RVSRRSHEI G +VAID+A
Sbjct: 243 LRHYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVAERVSRRSHEILGHEVAIDTAA 302
Query: 175 PLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 213
PL++ + ++ + +G YG MR++GR G LD++
Sbjct: 303 PLENDSAGGGY-IDPMDLYGAYGS-MRSFGRFCGGLDYN 339
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 98/226 (43%), Gaps = 64/226 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TFASAD +N++ H LG T+ V ATPKE+
Sbjct: 36 KERSSGRSRGFGYVTFASADDAKNVLDCEHVLGSRTLEVKIATPKEE------------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
S T+ A +IFV R+PQ RR+F
Sbjct: 83 -----MKSQGTKKAT-------------------------RIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD- 178
FG ILD+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP ++
Sbjct: 113 EAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQESHELDGTTVVVDRATPKEED 172
Query: 179 -----AGPSQ------NFMMNAAETFGGYGGPM------RTYGRMY 207
+ PSQ N ++AA + G P YGR Y
Sbjct: 173 VRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGY 218
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E LR Y ++FG + D V K RGFG+VTFA A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 61 LDCEHVLGSRTLEVKIATPKEE 82
>gi|212723574|ref|NP_001131827.1| uncharacterized protein LOC100193201 [Zea mays]
gi|194692652|gb|ACF80410.1| unknown [Zea mays]
gi|194701144|gb|ACF84656.1| unknown [Zea mays]
gi|224032577|gb|ACN35364.1| unknown [Zea mays]
gi|413951337|gb|AFW83986.1| heterogeneous nuclear ribonucleoprotein 27C isoform 1 [Zea mays]
gi|413951338|gb|AFW83987.1| heterogeneous nuclear ribonucleoprotein 27C isoform 2 [Zea mays]
gi|413951339|gb|AFW83988.1| heterogeneous nuclear ribonucleoprotein 27C isoform 3 [Zea mays]
gi|413951340|gb|AFW83989.1| heterogeneous nuclear ribonucleoprotein 27C isoform 4 [Zea mays]
gi|413951341|gb|AFW83990.1| heterogeneous nuclear ribonucleoprotein 27C isoform 5 [Zea mays]
Length = 360
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 175/219 (79%), Gaps = 8/219 (3%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSH 59
MPK+ GSK HRGIGFITF SA+SV+N+M ++HEL G+TVVVDRATPK++D R P R S
Sbjct: 123 MPKEHGSKGHRGIGFITFQSAESVDNIMQESHELDGTTVVVDRATPKDEDVRYPPSRPSQ 182
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAED 117
GGYGAYNAYISAATRYA LGAPTLYDHPGS YGRG SQ +GKKIFVGRLPQEA +D
Sbjct: 183 GGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTDD 242
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSAT 174
LR+YF RFGRI+D Y+ PKR+GHRGFGFVTFA++ VA+RV+RRSHEI G +VAID+A
Sbjct: 243 LRQYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAA 302
Query: 175 PLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 213
PL++ + + ++ + +G YG MR++GR G LD++
Sbjct: 303 PLENDSAAGGY-IDPMDLYGAYGS-MRSFGRFCGGLDYN 339
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 97/226 (42%), Gaps = 64/226 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TFASAD +N++ H LG T+ V ATPKE+ M G
Sbjct: 36 KERSSGRSRGFGYVTFASADDAKNVLDCEHVLGSRTLEVKVATPKEE-------MKSQG- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +IFV R+PQ RR+F
Sbjct: 88 -----------------------------------SKKATRIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD- 178
FG ILD+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP D+
Sbjct: 113 EAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDNIMQESHELDGTTVVVDRATPKDED 172
Query: 179 -----AGPSQ------NFMMNAAETFGGYGGPM------RTYGRMY 207
+ PSQ N ++AA + G P YGR Y
Sbjct: 173 VRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGY 218
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E LR Y ++FG + D V K RGFG+VTFA A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 61 LDCEHVLGSRTLEVKVATPKEE 82
>gi|195624050|gb|ACG33855.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
gi|195644612|gb|ACG41774.1| heterogeneous nuclear ribonucleoprotein 27C [Zea mays]
Length = 360
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 175/219 (79%), Gaps = 8/219 (3%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSH 59
MPK+ GSK HRGIGFITF SA+SV+N+M ++HEL G+TVVVDRATPK++D R P R S
Sbjct: 123 MPKEHGSKGHRGIGFITFQSAESVDNIMQESHELDGTTVVVDRATPKDEDVRYPPSRPSQ 182
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAED 117
GGYGAYNAYISAATRYA LGAPTLYDHPGS YGRG SQ +GKKIFVGRLPQEA +D
Sbjct: 183 GGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTDD 242
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSAT 174
LR+YF RFGRI+D Y+ PKR+GHRGFGFVTFA++ VA+RV+RRSHEI G +VAID+A
Sbjct: 243 LRQYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAA 302
Query: 175 PLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 213
PL++ + + ++ + +G YG MR++GR G LD++
Sbjct: 303 PLENDSAAGGY-IDPMDLYGAYGS-MRSFGRFCGGLDYN 339
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 97/226 (42%), Gaps = 64/226 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TFASAD +N++ H LG T+ V ATPKE+ M G
Sbjct: 36 KERSSGRSRGFGYVTFASADDAKNVLDCEHVLGSRTLEVKVATPKEE-------MKSQG- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +IFV R+PQ RR+F
Sbjct: 88 -----------------------------------SKKATRIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD- 178
FG ILD+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP D+
Sbjct: 113 EAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDNIMQESHELDGTTVVVDRATPKDED 172
Query: 179 -----AGPSQ------NFMMNAAETFGGYGGPM------RTYGRMY 207
+ PSQ N ++AA + G P YGR Y
Sbjct: 173 VRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGY 218
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E LR Y ++FG + D V K RGFG+VTFA A V
Sbjct: 1 MAMKLVVLGIPWDVDTEGLREYMAKFGPLDDCVVMKERSSGRSRGFGYVTFASADDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 61 LDCEHVLGSRTLEVKVATPKEE 82
>gi|222619863|gb|EEE55995.1| hypothetical protein OsJ_04743 [Oryza sativa Japonica Group]
Length = 372
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/253 (61%), Positives = 182/253 (71%), Gaps = 22/253 (8%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMS 58
MPK+ GSK HRGIGFITF SA+SV+++M D+HEL G+TVVVDRATPK+++ R P S
Sbjct: 123 MPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGAS 182
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRI-------------GKKIF 105
GGYGAYNAYISAATRYAALGAPTLYDHPGS YG S+ +I KKIF
Sbjct: 183 QGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGSKSSATKITGGGYYGSSQGMGNKKIF 242
Query: 106 VGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHE 162
VGRLPQEA EDLR YF +FGRI+D Y+ PKR+GHRGFGFVTFA+E VADRV+RRSHE
Sbjct: 243 VGRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHE 302
Query: 163 ICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD-DWGYGMGS 221
I G +VAID+A PL+ G S M + +G YG MRTYGR +D+D +G+ S
Sbjct: 303 ILGHEVAIDTAAPLE--GDSGGGYMEPMDLYGAYGS-MRTYGRFCSGIDYDYGYGHSGSS 359
Query: 222 GRPSRGDWRYRPY 234
SR DWRYRPY
Sbjct: 360 SSRSRADWRYRPY 372
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 91/213 (42%), Gaps = 59/213 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TF+SAD +N++ H LG T+ V ATPKE+ M G
Sbjct: 36 KERSSGRSRGFGYVTFSSADDAKNVLECEHVLGNRTLEVKIATPKEE-------MKSQG- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +IFV R+PQ RR+F
Sbjct: 88 -----------------------------------SKKATRIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
+G I D+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP D+
Sbjct: 113 EAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEE 172
Query: 180 -------GPSQ------NFMMNAAETFGGYGGP 199
G SQ N ++AA + G P
Sbjct: 173 VRYPPSRGASQGGYGAYNAYISAATRYAALGAP 205
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E LR Y +FG + D V K RGFG+VTF+ A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 61 LECEHVLGNRTLEVKIATPKEE 82
>gi|413951342|gb|AFW83991.1| hypothetical protein ZEAMMB73_503439 [Zea mays]
Length = 278
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 175/219 (79%), Gaps = 8/219 (3%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGRMSH 59
MPK+ GSK HRGIGFITF SA+SV+N+M ++HEL G+TVVVDRATPK++D R P R S
Sbjct: 41 MPKEHGSKGHRGIGFITFQSAESVDNIMQESHELDGTTVVVDRATPKDEDVRYPPSRPSQ 100
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQEATAED 117
GGYGAYNAYISAATRYA LGAPTLYDHPGS YGRG SQ +GKKIFVGRLPQEA +D
Sbjct: 101 GGYGAYNAYISAATRYATLGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTDD 160
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSAT 174
LR+YF RFGRI+D Y+ PKR+GHRGFGFVTFA++ VA+RV+RRSHEI G +VAID+A
Sbjct: 161 LRQYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADDGVAERVARRSHEILGHEVAIDTAA 220
Query: 175 PLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 213
PL++ + + ++ + +G YG MR++GR G LD++
Sbjct: 221 PLENDSAAGGY-IDPMDLYGAYGS-MRSFGRFCGGLDYN 257
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRR 159
+IFV R+PQ RR+F FG ILD+Y+PK GHRG GF+TF D + +
Sbjct: 11 RIFVARIPQSVDESMFRRHFEAFGEILDLYMPKEHGSKGHRGIGFITFQSAESVDNIMQE 70
Query: 160 SHEICGQQVAIDSATPLDD------AGPSQ------NFMMNAAETFGGYGGPM------R 201
SHE+ G V +D ATP D+ + PSQ N ++AA + G P
Sbjct: 71 SHELDGTTVVVDRATPKDEDVRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDHPGS 130
Query: 202 TYGRMY 207
YGR Y
Sbjct: 131 AYGRGY 136
>gi|218189712|gb|EEC72139.1| hypothetical protein OsI_05159 [Oryza sativa Indica Group]
Length = 864
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/231 (62%), Positives = 169/231 (73%), Gaps = 21/231 (9%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMS 58
MPK+ GSK HRGIGFITF SA+SV+++M D+HEL G+TVVVDRATPK+++ R P S
Sbjct: 123 MPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEEVRYPPSRGAS 182
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRI-------------GKKIF 105
GGYGAYNAYISAATRYAALGAPTLYDHPGS YG S+ +I KKIF
Sbjct: 183 QGGYGAYNAYISAATRYAALGAPTLYDHPGSAYGSKSSATKITGGGYYGSSQGMGNKKIF 242
Query: 106 VGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHE 162
VGRLPQEA EDLR YF +FGRI+D Y+ PKR+GHRGFGFVTFA+E VADRV+RRSHE
Sbjct: 243 VGRLPQEANTEDLRHYFGKFGRIVDAYIPKDPKRSGHRGFGFVTFADEGVADRVARRSHE 302
Query: 163 ICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 213
I G +VAID+A PL+ G S M + +G YG MRTYGR +D+D
Sbjct: 303 ILGHEVAIDTAAPLE--GDSGGGYMEPMDLYGAYGS-MRTYGRFCSGIDYD 350
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 59/213 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ S RG G++TF+SAD +N++ H LG T+ V ATPKE+
Sbjct: 36 KERSSGRSRGFGYVTFSSADDAKNVLECEHVLGNRTLEVKIATPKEEM------------ 83
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ + S++ +IFV R+PQ RR+F
Sbjct: 84 ------------------------------KSQGSKK-ATRIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
+G I D+Y+PK GHRG GF+TF D + + SHE+ G V +D ATP D+
Sbjct: 113 EAYGEITDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQDSHELDGTTVVVDRATPKDEE 172
Query: 180 -------GPSQ------NFMMNAAETFGGYGGP 199
G SQ N ++AA + G P
Sbjct: 173 VRYPPSRGASQGGYGAYNAYISAATRYAALGAP 205
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E LR Y +FG + D V K RGFG+VTF+ A V
Sbjct: 1 MATKLVVLGIPWDVDTEGLREYMGKFGPLDDCVVMKERSSGRSRGFGYVTFSSADDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
H + + + + ATP ++
Sbjct: 61 LECEHVLGNRTLEVKIATPKEE 82
>gi|326514108|dbj|BAJ92204.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525627|dbj|BAJ88860.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/244 (60%), Positives = 179/244 (73%), Gaps = 13/244 (5%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPV----GR 56
MPK+ GSK HRGIGF+TF SA+ V+N+M + HE+ G+TVVVDRATPK+++ R G
Sbjct: 123 MPKELGSKEHRGIGFVTFRSAECVDNVMQENHEIDGTTVVVDRATPKDEEVRHPPRRGGA 182
Query: 57 MSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR--IGKKIFVGRLPQEAT 114
GGYG+YNAYI+AATRYAALG PTLYDHPG YGRG ++ KKIFVGRLPQEA
Sbjct: 183 EREGGYGSYNAYITAATRYAALGVPTLYDHPGPAYGRGYLNEPPVSSKKIFVGRLPQEAN 242
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAID 171
+DL YF RFGRI+D Y+ PK++GHRGFGFVTFAE+ VADRV+RRSHEI GQ+VA+D
Sbjct: 243 TDDLWDYFGRFGRIVDAYIPKDPKKSGHRGFGFVTFAEDGVADRVARRSHEILGQEVAVD 302
Query: 172 SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG-MGSGRPSRGDWR 230
SA P+ + GPS+ M +G Y GPM +YG+ GSL + D+GYG GS SR R
Sbjct: 303 SAAPV-EGGPSRGGYMEPPGPYGAY-GPMMSYGQFSGSLGY-DYGYGPSGSSGRSRVQPR 359
Query: 231 YRPY 234
YRPY
Sbjct: 360 YRPY 363
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 86/200 (43%), Gaps = 51/200 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ S RG G++TF+S + +N++ H LG T+ V ATPKE+
Sbjct: 36 KDRSSGRSRGFGYVTFSSVEDAKNVVNSEHILGDRTLEVKIATPKEE------------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
S + +IFV R+PQ RR+F
Sbjct: 83 ------------------------------MRASGNKKATRIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
FG I D+Y+PK G HRG GFVTF D V + +HEI G V +D ATP D+
Sbjct: 113 QSFGEITDLYMPKELGSKEHRGIGFVTFRSAECVDNVMQENHEIDGTTVVVDRATPKDEE 172
Query: 180 --GPSQNFMMNAAETFGGYG 197
P + AE GGYG
Sbjct: 173 VRHPPRR---GGAEREGGYG 189
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E L+ Y S+FG + D V K RGFG+VTF+ A V
Sbjct: 1 MASKLVVLGIPWDVDTEGLKEYMSKFGSLDDCIVMKDRSSGRSRGFGYVTFSSVEDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDDAGPSQN 184
H + + + + ATP ++ S N
Sbjct: 61 VNSEHILGDRTLEVKIATPKEEMRASGN 88
>gi|4006877|emb|CAB16795.1| RNA-binding like protein [Arabidopsis thaliana]
gi|7270645|emb|CAB80362.1| RNA-binding like protein [Arabidopsis thaliana]
Length = 306
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/268 (58%), Positives = 182/268 (67%), Gaps = 56/268 (20%)
Query: 3 KDQGSKAHRGIGFITFASAD--------------------------------SVENLMVD 30
KD+ + RG G++TFASA+ SVE+LM D
Sbjct: 36 KDRSTGRSRGFGYVTFASAEDAKEEMRQPAKKVTRIFVARIPSSVSESDFRNSVEDLMED 95
Query: 31 THELGGSTVVVDRATPKEDDFRP----VGRMSH------------GGYGAYNAYISAATR 74
TH+LGG+TV VDRATPKEDD P V RMS GGYGAY+AYISAATR
Sbjct: 96 THDLGGTTVAVDRATPKEDDHPPRPPPVARMSRPPVAIAGGFGAPGGYGAYDAYISAATR 155
Query: 75 YAALGAPTLYDHPGSFYGRGESSQR-IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV 133
YAALGAPTLYD+P +FYGRGE + R IG KIFVGRLPQEA+ +DLR YF RFG I D Y+
Sbjct: 156 YAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYI 215
Query: 134 PK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPS--QNFMMN 188
PK R+GHRGFGFVTFAE VADRV+RRSHEICGQ+VAIDSATPLD+AGPS + M++
Sbjct: 216 PKDPKRSGHRGFGFVTFAENGVADRVARRSHEICGQEVAIDSATPLDEAGPSAGASSMLS 275
Query: 189 AA--ETFGGYGGPMRTYGRMYGSLDFDD 214
++ E FGGYGGPMR +GRMYG + DD
Sbjct: 276 SSRPEYFGGYGGPMRAFGRMYGGMSLDD 303
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED 49
+PKD HRG GF+TFA + + +HE+ G V +D ATP ++
Sbjct: 215 IPKDPKRSGHRGFGFVTFAENGVADRVARRSHEICGQEVAIDSATPLDE 263
>gi|357133920|ref|XP_003568569.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 366
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/224 (62%), Positives = 172/224 (76%), Gaps = 13/224 (5%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR--PVGRMS 58
MPK+ GSK HRGIGF+TF SA+ V+++M +THEL G+TVVVDRATPK++D R P R +
Sbjct: 123 MPKELGSKDHRGIGFVTFRSAECVDDVMKETHELDGTTVVVDRATPKDEDVRHPPRSRRA 182
Query: 59 ----HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRI--GKKIFVGRLPQE 112
GGYG+YNAYI+AATRYAALG PTLYDHPG YGRG S++ + GKKIFVGRLPQE
Sbjct: 183 PVHGDGGYGSYNAYITAATRYAALGVPTLYDHPGQAYGRGYSNEPLVTGKKIFVGRLPQE 242
Query: 113 ATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVA 169
A +DL YF RFGRI+D Y+PK R+GHRGFGFVTFA++ VADRV+RRSHEI GQ+VA
Sbjct: 243 ANTDDLWDYFGRFGRIVDAYIPKDPKRSGHRGFGFVTFADDGVADRVARRSHEILGQEVA 302
Query: 170 IDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFD 213
+DSA PL + G S + M +A +G Y GPM +YG GSL +D
Sbjct: 303 VDSAAPL-EGGSSGSGYMESAGPYGAY-GPMLSYGHFSGSLGYD 344
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 79/179 (44%), Gaps = 46/179 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ S RG G++TF+S + +N++ H LG T+ V ATPKE+
Sbjct: 36 KDRSSGRSRGFGYVTFSSEEDAKNVVNCEHILGDRTLEVKIATPKEE------------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
S + +IFV R+PQ RR+F
Sbjct: 83 ------------------------------MRASGNKKATRIFVARIPQSVDESMFRRHF 112
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
FG I+D+Y+PK G HRG GFVTF D V + +HE+ G V +D ATP D+
Sbjct: 113 QSFGEIIDLYMPKELGSKDHRGIGFVTFRSAECVDDVMKETHELDGTTVVVDRATPKDE 171
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV 156
+ K+ V +P + E LR Y S+FG + D V K RGFG+VTF+ E A V
Sbjct: 1 MASKLVVLGIPWDVDTEGLREYMSKFGPLDDCIVMKDRSSGRSRGFGYVTFSSEEDAKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDDAGPSQN 184
H + + + + ATP ++ S N
Sbjct: 61 VNCEHILGDRTLEVKIATPKEEMRASGN 88
>gi|414878726|tpg|DAA55857.1| TPA: hypothetical protein ZEAMMB73_809994 [Zea mays]
Length = 209
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/192 (65%), Positives = 150/192 (78%), Gaps = 8/192 (4%)
Query: 28 MVDTHELGGSTVVVDRATPKEDDFR-PVGRMSHGGYGAYNAYISAATRYAALGAPTLYDH 86
M ++HEL G+TVVVDRATPKE+D R P R S GGYGAYNAYISAATRYA LGAPTLYDH
Sbjct: 1 MQESHELDGTTVVVDRATPKEEDVRYPPSRPSQGGYGAYNAYISAATRYATLGAPTLYDH 60
Query: 87 PGSFYGRGE--SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRG 141
PGS YGRG SSQ +GKKIFVGRLPQEA +DLR YF RFGRI+D Y+ PKR+GHRG
Sbjct: 61 PGSAYGRGYYGSSQAVGKKIFVGRLPQEANTDDLRHYFGRFGRIVDAYIPKDPKRSGHRG 120
Query: 142 FGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMR 201
FGFVTFA+E VA+RVSRRSHEI G +VAID+A PL++ + ++ + +G YG MR
Sbjct: 121 FGFVTFADEGVAERVSRRSHEILGHEVAIDTAAPLENDSAGGGY-IDPMDLYGAYGS-MR 178
Query: 202 TYGRMYGSLDFD 213
++GR G LD++
Sbjct: 179 SFGRFCGGLDYN 190
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDD 50
+PKD HRG GF+TFA E + +HE+ G V +D A P E+D
Sbjct: 109 IPKDPKRSGHRGFGFVTFADEGVAERVSRRSHEILGHEVAIDTAAPLEND 158
>gi|148905888|gb|ABR16106.1| unknown [Picea sitchensis]
Length = 409
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 151/291 (51%), Positives = 170/291 (58%), Gaps = 63/291 (21%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPK++GSK HRGIGFITF S+ SV+ LM +TH LGG+T+ VDRATPKE+ + + G
Sbjct: 125 MPKEKGSKGHRGIGFITFESSGSVDRLMSETHMLGGATIAVDRATPKEESTKQWAKPVSG 184
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHP------------GSFYGRGES------------ 96
GYGAYNAYI+AATRY ALG+ TLYDHP G YG G S
Sbjct: 185 GYGAYNAYINAATRYGALGSATLYDHPSSGFRDGYASEVGGGYGSGNSWPPHGAGGMIGG 244
Query: 97 ---------------------SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK 135
+ +GKKIFVGRL QEATA DLRRYFS FG ++DVYVPK
Sbjct: 245 SSYGMADRGAGYGPGSFSGPPPRGMGKKIFVGRLSQEATAGDLRRYFSNFGTVVDVYVPK 304
Query: 136 ---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG--PSQNFMMNAA 190
R+GHRGFGFVTFAE+ VADRVSRRSHEI GQQVAIDSATP DD A
Sbjct: 305 DARRSGHRGFGFVTFAEDGVADRVSRRSHEILGQQVAIDSATPPDDDIHYVDDGIPPPAG 364
Query: 191 ETFGGYGGPMRTYGRMYGSLDFDDWGYGMG-------SGRPSRGDWRYRPY 234
G GP G Y DWGYG GR SR D+RYRPY
Sbjct: 365 GIGGPLRGPASYSGGGY------DWGYGSSGIGPGPTGGRASRMDYRYRPY 409
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 58/209 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG G+ TF+S + + + H L G + V ATPKE+
Sbjct: 39 RDRATGRSRGFGYATFSSVEDAKKALDSEHFLNGRALEVKVATPKEE------------- 85
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ AP S++I +IFV R+P T + R+YF
Sbjct: 86 ---------------MKAP---------------SKKI-TRIFVARIPPSVTEDAFRKYF 114
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD- 178
FG I D+Y+PK GHRG GF+TF DR+ +H + G +A+D ATP ++
Sbjct: 115 EEFGNIEDLYMPKEKGSKGHRGIGFITFESSGSVDRLMSETHMLGGATIAVDRATPKEES 174
Query: 179 ----AGP------SQNFMMNAAETFGGYG 197
A P + N +NAA +G G
Sbjct: 175 TKQWAKPVSGGYGAYNAYINAATRYGALG 203
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + E L+ Y +FG + DV V + TG RGFG+ TF+ A +
Sbjct: 6 RKLVVLGIPWDVDTEGLQDYMGKFGELDDVIVMRDRATGRSRGFGYATFSSVEDAKKALD 65
Query: 159 RSHEICGQQVAIDSATPLDD-AGPSQNF 185
H + G+ + + ATP ++ PS+
Sbjct: 66 SEHFLNGRALEVKVATPKEEMKAPSKKI 93
>gi|388505314|gb|AFK40723.1| unknown [Medicago truncatula]
Length = 165
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/165 (68%), Positives = 127/165 (76%), Gaps = 13/165 (7%)
Query: 83 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGH 139
+YD P S YGRGE ++ I KKIFVGRLP EAT EDLR YF RFG ILDVY+P KR GH
Sbjct: 1 MYDRPSSIYGRGEPARGISKKIFVGRLPPEATTEDLRLYFGRFGHILDVYIPRDVKRPGH 60
Query: 140 RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG- 198
RGFGFVTFA+ VADRVSRR HEICGQ+VAIDSA PLD+AGPS N M+N+ ++F GYGG
Sbjct: 61 RGFGFVTFADSGVADRVSRRPHEICGQEVAIDSAAPLDEAGPSGNTMLNSMDSFRGYGGP 120
Query: 199 --------PMRTYGRMYGSLDFDDWGYGMGSGRPSR-GDWRYRPY 234
P+R+YGRMY SLDFDD GYG+ S RPSR DWRYRPY
Sbjct: 121 VRPYFDESPVRSYGRMYNSLDFDDLGYGVASRRPSRTTDWRYRPY 165
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED 49
+P+D HRG GF+TFA + + + HE+ G V +D A P ++
Sbjct: 51 IPRDVKRPGHRGFGFVTFADSGVADRVSRRPHEICGQEVAIDSAAPLDE 99
>gi|302755192|ref|XP_002961020.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
gi|302767142|ref|XP_002966991.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300164982|gb|EFJ31590.1| hypothetical protein SELMODRAFT_144531 [Selaginella moellendorffii]
gi|300171959|gb|EFJ38559.1| hypothetical protein SELMODRAFT_164019 [Selaginella moellendorffii]
Length = 395
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 140/272 (51%), Positives = 159/272 (58%), Gaps = 43/272 (15%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKDQGSKAHRGIGF+T+ DSVE LM THEL GST+ VDRATPK G+
Sbjct: 129 MPKDQGSKAHRGIGFVTYEDPDSVEKLMGKTHELAGSTIAVDRATPKF-----WGKSYPS 183
Query: 61 GYGAYNAYISAATRYAALG------APTLYDHP------------GSFYG------RGES 96
YG Y Y +AA R+ A G A YD+P G YG S
Sbjct: 184 IYGPYGIYTNAAARFGAFGTHFGSSAFGAYDYPPALATEIAGSGIGGAYGPVSAPMNISS 243
Query: 97 SQR--IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEV 151
SQ IGKKIFVGRLP +ATAEDLRRYF FGR+LDVYVP K+ HRGFGFVTFA+E
Sbjct: 244 SQNRGIGKKIFVGRLPLDATAEDLRRYFGNFGRLLDVYVPKDAKKLSHRGFGFVTFADES 303
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMR----TYGR 205
VADRV+ RSHE+ G Q+A+D ATP D+AG M + G GGPMR G
Sbjct: 304 VADRVALRSHELLGVQIAVDRATPQDEAGAGSGTASYMGPSSILQGAGGPMRGASAIAGS 363
Query: 206 MYGSLDFD---DWGYGMGSGRPSRGDWRYRPY 234
YG +D W YG RPSR + RYRPY
Sbjct: 364 AYGLGGYDYNGAWLYGDAGHRPSRMETRYRPY 395
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 55/204 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG G++TF S++ E ++ H L G + V ATPKE+ +P
Sbjct: 45 KDRSTGRSRGFGYVTFTSSEDAEKALLAQHSLSGRILEVKVATPKEEMLKP--------- 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
TR +FV R+P + R YF
Sbjct: 96 --------KVTR-----------------------------VFVARIPPSVNDDTFRNYF 118
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP--LD 177
++GRI D Y+PK G HRG GFVT+ + +++ ++HE+ G +A+D ATP
Sbjct: 119 EKYGRITDAYMPKDQGSKAHRGIGFVTYEDPDSVEKLMGKTHELAGSTIAVDRATPKFWG 178
Query: 178 DAGPS----QNFMMNAAETFGGYG 197
+ PS NAA FG +G
Sbjct: 179 KSYPSIYGPYGIYTNAAARFGAFG 202
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSR 158
+K+ V +P + E LR Y ++FG + DV V K TG RGFG+VTF A++
Sbjct: 12 RKLVVLGIPWDVDTEGLRSYMTKFGGLDDVIVMKDRSTGRSRGFGYVTFTSSEDAEKALL 71
Query: 159 RSHEICGQQVAIDSATPLDD 178
H + G+ + + ATP ++
Sbjct: 72 AQHSLSGRILEVKVATPKEE 91
>gi|168067843|ref|XP_001785814.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662538|gb|EDQ49378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 152/241 (63%), Gaps = 28/241 (11%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKDQGSKAHRGIGF+TF + +SV+NLM +THELGGST+ VDRATPKED + GR HG
Sbjct: 116 MPKDQGSKAHRGIGFVTFENPESVDNLMNETHELGGSTIAVDRATPKEDGVKTWGRGFHG 175
Query: 61 G------------YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESS--QRIGKKIFV 106
G YGAY Y +AA G YD+ GS +G + +G KIFV
Sbjct: 176 GNQNSASNAGSGAYGAYGVYTNAARFGGLGGGFGAYDYSGSGFGSPPIPPLRGLGTKIFV 235
Query: 107 GRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEI 163
GRLP EA AEDLRRYF+ FGRI DVYVP K+T HRGFGFVTF++E A+RV+ R+HEI
Sbjct: 236 GRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALRNHEI 295
Query: 164 CGQQVAIDSATPLDDAG--PSQNFMMNAAETFGGYGGPMR---------TYGRMYGSLDF 212
G Q+A+D A P D+ P + + GG GGPMR YG + GSLDF
Sbjct: 296 LGHQIAVDRAAPQDETANVPYMSGVGGVGSLSGGAGGPMRGSNAPLQGSGYGSLPGSLDF 355
Query: 213 D 213
+
Sbjct: 356 N 356
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 57/208 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+G+ RG G++TFA+ + + + H L G + V ATPKE+ P +++
Sbjct: 30 KDRGTGRSRGFGYVTFAAVEDAKKAVSTQHSLNGRMLEVKVATPKEEMKPPAKKIT---- 85
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++FV R+P T E R YF
Sbjct: 86 ----------------------------------------RVFVARIPPSVTDEAFRSYF 105
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
++G + D Y+PK G HRG GFVTF D + +HE+ G +A+D ATP +D
Sbjct: 106 EKYGTLTDAYMPKDQGSKAHRGIGFVTFENPESVDNLMNETHELGGSTIAVDRATPKEDG 165
Query: 180 ---------GPSQNFMMNAAE-TFGGYG 197
G +QN NA +G YG
Sbjct: 166 VKTWGRGFHGGNQNSASNAGSGAYGAYG 193
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 109 LPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICG 165
+P + E LR+Y +FG + DV V K G RGFG+VTFA A + H + G
Sbjct: 4 IPWDIDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFAAVEDAKKAVSTQHSLNG 63
Query: 166 QQVAIDSATPLDDAGP 181
+ + + ATP ++ P
Sbjct: 64 RMLEVKVATPKEEMKP 79
>gi|218196677|gb|EEC79104.1| hypothetical protein OsI_19737 [Oryza sativa Indica Group]
Length = 297
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 150/233 (64%), Gaps = 19/233 (8%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPK-EDDFRPV-GRMS 58
MPK+ SK+HRGIGFITF SA+ V+N+M +THEL G+TV VDRATPK + P+ S
Sbjct: 41 MPKELRSKSHRGIGFITFRSAECVDNIMQETHELDGTTVAVDRATPKVVSNTHPLFNYNS 100
Query: 59 HGGYGAYNAYISAATRYAALGAP-------TLYDHPGSFYGRGE--SSQRIGKKIFVGRL 109
Y+ R LG P T YDHPG YGRG S GKKIFVGRL
Sbjct: 101 VDALCIYDNAFFPTNRMKMLGTPQGELFRATSYDHPGPAYGRGHIGGSLGTGKKIFVGRL 160
Query: 110 PQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQ 166
PQEA +DL YF RFGRI+D Y+ PKR+GH GFGFVTFA++ VADRV++RSHEI GQ
Sbjct: 161 PQEANTDDLWDYFGRFGRIVDAYIPKDPKRSGHGGFGFVTFADDGVADRVAQRSHEILGQ 220
Query: 167 QVAIDSATPLDDAGPSQNFMMNAAETFGGYG--GPMRTYGRMYGSLDFDDWGY 217
+VA+D+A PL+ G S + AE +G YG G + YGR GSL + D+GY
Sbjct: 221 EVAVDTAEPLE--GGSGGGYLEPAEAYGPYGAYGSLLPYGRFSGSLGY-DYGY 270
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRT---GHRGFGFVTFAEEVVADRVSRR 159
+IFV R+PQ RR+F FG I+D+Y+PK HRG GF+TF D + +
Sbjct: 11 RIFVARIPQSVDESKFRRHFEAFGEIIDLYMPKELRSKSHRGIGFITFRSAECVDNIMQE 70
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRM 206
+HE+ G VA+D ATP + F N+ + Y RM
Sbjct: 71 THELDGTTVAVDRATPKVVSNTHPLFNYNSVDALCIYDNAFFPTNRM 117
>gi|326522138|dbj|BAK04197.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 371
Score = 199 bits (507), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/248 (50%), Positives = 160/248 (64%), Gaps = 15/248 (6%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFR-PVGR--- 56
MPK+ GSK HRGIGFITF SA+SV+++M ++HEL G+T+ VD ATPK++D R P R
Sbjct: 125 MPKEHGSKGHRGIGFITFQSAESVDSIMQESHELDGTTLHVDHATPKDEDTRHPPSRAFQ 184
Query: 57 ---MSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE--SSQRIGKKIFVGRLPQ 111
GYGAY+ YI+A T + A+G PT YDH G YGRG S Q IGKKIFVG LPQ
Sbjct: 185 DGGDYGLGYGAYDVYIAATTMFGAVGPPTRYDHQGPAYGRGYSGSPQGIGKKIFVGGLPQ 244
Query: 112 EATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQV 168
A +DLR YF FG + DV++ PK +GHRGFGFVTF++E VAD ++ +SHEI G +V
Sbjct: 245 GAKKDDLRNYFGGFGGVADVFIPRDPKGSGHRGFGFVTFSDEGVADNIADKSHEILGCKV 304
Query: 169 AID-SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG-MGSGRPSR 226
+D +A P D+ M + G MR +G G+L + D GYG GSG SR
Sbjct: 305 IVDITAPPRGDSSGRFTDPMPGVDLNAPPYGSMRPFGMFCGNLGY-DQGYGPSGSGSRSR 363
Query: 227 GDWRYRPY 234
D R+RPY
Sbjct: 364 TDGRHRPY 371
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 97/232 (41%), Gaps = 68/232 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ S RG G++TF+SAD V+N++ H L + V ATP+E+
Sbjct: 36 KDRLSGRSRGFGYVTFSSADDVKNVLEFKHFLRNRALEVKIATPREE------------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ P + +IFVGR+PQ A RR+F
Sbjct: 83 --------------------MKPQP--------QGTKTATRIFVGRIPQSADESMFRRHF 114
Query: 123 SRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
FG I+D+Y+PK GHRG GF+TF D + + SHE+ G + +D ATP D+
Sbjct: 115 EAFGEIIDLYMPKEHGSKGHRGIGFITFQSAESVDSIMQESHELDGTTLHVDHATPKDED 174
Query: 180 G---PSQNFM---------------MNAAETFGGYGGPMR------TYGRMY 207
PS+ F + A FG G P R YGR Y
Sbjct: 175 TRHPPSRAFQDGGDYGLGYGAYDVYIAATTMFGAVGPPTRYDHQGPAYGRGY 226
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRV 156
+G K+ V LP + +E LR++ ++FG + D V K +G RGFG+VTF+ V
Sbjct: 1 MGTKLVVFGLPWDVDSEGLRKHMAKFGPLEDCVVMKDRLSGRSRGFGYVTFSSADDVKNV 60
Query: 157 SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
H + + + + ATP ++ P A F G
Sbjct: 61 LEFKHFLRNRALEVKIATPREEMKPQPQGTKTATRIFVG 99
>gi|167999759|ref|XP_001752584.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696115|gb|EDQ82455.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/199 (55%), Positives = 131/199 (65%), Gaps = 20/199 (10%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKDQGSKAHRGIGF+TF +SV+ LM +THELGGST+ VDRATPKED + GR HG
Sbjct: 118 MPKDQGSKAHRGIGFVTFEIPESVDRLMNETHELGGSTIAVDRATPKEDGVKTWGRGFHG 177
Query: 61 G------------YGAYNAYISAATRYAALGAPTLYDHP--GSFYGRGESS---QRIGKK 103
G YGAY Y + A G YD+P GSF G + +G K
Sbjct: 178 GNQNSGSNAGSGSYGAYGVYTNTARFGGLGGGFGAYDYPVSGSFGSGGPPVPPLRGLGTK 237
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRS 160
IFVGRLP EA AEDLRRYF+ FGRI DVYVP K+T HRGFGFVTF++E A+RV+ R+
Sbjct: 238 IFVGRLPPEANAEDLRRYFNNFGRISDVYVPKDAKKTSHRGFGFVTFSDEGAAERVALRN 297
Query: 161 HEICGQQVAIDSATPLDDA 179
HEI G Q+A+D A P D+
Sbjct: 298 HEILGHQIAVDRAAPQDEV 316
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 57/208 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+G+ RG G++TFA+ + + + H L G + V ATPKE+ P +++
Sbjct: 32 KDRGTGRSRGFGYVTFATVEDAKKTVSTQHSLNGRMLEVKVATPKEEMKPPAKKIT---- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++FV R+P T E R YF
Sbjct: 88 ----------------------------------------RVFVARIPPSVTDEAFRSYF 107
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
++G + D Y+PK G HRG GFVTF DR+ +HE+ G +A+D ATP +D
Sbjct: 108 EKYGTLTDAYMPKDQGSKAHRGIGFVTFEIPESVDRLMNETHELGGSTIAVDRATPKEDG 167
Query: 180 ---------GPSQNFMMNAAE-TFGGYG 197
G +QN NA ++G YG
Sbjct: 168 VKTWGRGFHGGNQNSGSNAGSGSYGAYG 195
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 109 LPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICG 165
+P + E LR+Y +FG + DV V K G RGFG+VTFA A + H + G
Sbjct: 6 IPWDVDTEGLRQYMLKFGELDDVIVMKDRGTGRSRGFGYVTFATVEDAKKTVSTQHSLNG 65
Query: 166 QQVAIDSATPLDDAGP 181
+ + + ATP ++ P
Sbjct: 66 RMLEVKVATPKEEMKP 81
>gi|224285299|gb|ACN40374.1| unknown [Picea sitchensis]
Length = 520
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 130/229 (56%), Gaps = 52/229 (22%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
MPKDQ +K HRGIGF+T+ +A+SV+ +M ++HEL GST+ VDRATPKE+ R R G
Sbjct: 125 MPKDQTTKQHRGIGFVTYENAESVDEVMSESHELAGSTIAVDRATPKEETGRVWERNFPG 184
Query: 61 GYGAYNAYISAATRYAALGAPTL--YDHPGS-----------FYGRGE------------ 95
G +N++++ T + YD PGS YGR
Sbjct: 185 ASGVFNSHVNT-THFGTFDVSAFGGYDFPGSDRAAKGNTYGGNYGRNNLWRAGPPAPQVG 243
Query: 96 -----------------------SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVY 132
+ R+G+KIFVGR+P EATAEDL+ YFS+FG++LD Y
Sbjct: 244 GPSPVIPSIDPSAMNYGSTDSNFAPSRMGRKIFVGRIPVEATAEDLQLYFSQFGQVLDAY 303
Query: 133 VPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
+PK + HRGFGFVTFAEE A+ VS+R HEI G +A+D A+PLD+
Sbjct: 304 LPKDAKKISHRGFGFVTFAEESTAEHVSQRRHEILGHLIAVDRASPLDE 352
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 134/259 (51%), Gaps = 67/259 (25%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+PKD +HRG GF+TFA + E++ HE+ G + VDRA+P D+ VG +
Sbjct: 304 LPKDAKKISHRGFGFVTFAEESTAEHVSQRRHEILGHLIAVDRASPL-DETPSVGVYAPS 362
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G +GKKIF+GR+P EAT EDLR
Sbjct: 363 G--------------------------------------LGKKIFIGRIPVEATTEDLRL 384
Query: 121 YFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
YFS++GRILDVY+P K+ HRGFGFVTFAEE A+ V++++HEI G ++A+D A PLD
Sbjct: 385 YFSQYGRILDVYLPKDAKKISHRGFGFVTFAEESAAEHVAQKAHEILGHRIAVDRAAPLD 444
Query: 178 DAGPSQNFMMNAAETFGGYGGPMR---------TYGRMYGSLDFDD-WGYGMGSG----- 222
+ +++ + + FGG GGP+R YG M +L F+ W G G
Sbjct: 445 E---TRSGLKPSNALFGGAGGPLRGSSSTLSGSAYGNMPANLAFNSGWTPYDGVGHMATA 501
Query: 223 -------RPSRGDWRYRPY 234
R SR + RYRPY
Sbjct: 502 NGGPSGHRISRMETRYRPY 520
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 80/181 (44%), Gaps = 47/181 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ S RG G++TF+S E M H L G T+ V ATPK D+ RP
Sbjct: 39 KDRVSGRSRGFGYVTFSSDGGAEKAMAGQHVLQGRTLEVKIATPK-DEMRP--------- 88
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+S++I +IFV R+ T E R YF
Sbjct: 89 ---------------------------------TSRKI-TRIFVARISPTVTDEMFRSYF 114
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
++G ILD Y+PK HRG GFVT+ D V SHE+ G +A+D ATP ++
Sbjct: 115 EKYGSILDAYMPKDQTTKQHRGIGFVTYENAESVDEVMSESHELAGSTIAVDRATPKEET 174
Query: 180 G 180
G
Sbjct: 175 G 175
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK-RTG--HRGFGFVTFAEEVVADRVSR 158
+K+ V +P + E L +Y +FG + DV V K R RGFG+VTF+ + A++
Sbjct: 6 RKLVVLGIPWDVDTEGLGQYMCQFGDLEDVIVMKDRVSGRSRGFGYVTFSSDGGAEKAMA 65
Query: 159 RSHEICGQQVAIDSATPLDDAGPS 182
H + G+ + + ATP D+ P+
Sbjct: 66 GQHVLQGRTLEVKIATPKDEMRPT 89
>gi|384254104|gb|EIE27578.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 412
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 114/207 (55%), Gaps = 28/207 (13%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKE-------DDFRP 53
MPKD ++HRGIGF+TFA+ADSVE +M H + G + +DRATPK+ +DF P
Sbjct: 165 MPKDATKQSHRGIGFVTFANADSVEAVMSSPHSMNGQELAIDRATPKDKPSDSAGNDFNP 224
Query: 54 VGRMSHGGYGAYNAY--------ISAATRYAALGAPTLYDHPGS------FYGRGES-SQ 98
+++G G AY + AA A G GS G G S
Sbjct: 225 YQAVANGN-GRTTAYSSGGGSSSVVAAFEGANGGQAANSGGSGSGELFQPMRGDGASIDT 283
Query: 99 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK----RTGHRGFGFVTFAEEVVAD 154
R G +IFVG+L +E T D++ YF+RFG ++DVY+P+ R+ HRGFGFVTF +
Sbjct: 284 RSGPRIFVGKLNKETTENDVKEYFTRFGYVMDVYLPRDKVNRSEHRGFGFVTFETDGAVL 343
Query: 155 RV-SRRSHEICGQQVAIDSATPLDDAG 180
R+ + H+I G VAIDSA P + G
Sbjct: 344 RIHAHGQHQIKGSVVAIDSAVPRREEG 370
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
+IFV R+P R+YF ++G + D Y+PK + HRG GFVTFA + V
Sbjct: 135 RIFVARIPLSVNDAQFRQYFEQYGSVQDAYMPKDATKQSHRGIGFVTFANADSVEAVMSS 194
Query: 160 SHEICGQQVAIDSATPLD 177
H + GQ++AID ATP D
Sbjct: 195 PHSMNGQELAIDRATPKD 212
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSR 158
+K+ + LP + T L ++FS+FG + +V + K TG RGFGFVTF + A +
Sbjct: 48 RKLVILGLPWDTTEASLEQHFSQFGPLQEVVIMKDRTTGKSRGFGFVTFFRAMDASCAAS 107
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G++ A P
Sbjct: 108 QEHVVDGRRCEAKYALP 124
>gi|302838536|ref|XP_002950826.1| hypothetical protein VOLCADRAFT_43575 [Volvox carteri f.
nagariensis]
gi|300263943|gb|EFJ48141.1| hypothetical protein VOLCADRAFT_43575 [Volvox carteri f.
nagariensis]
Length = 303
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 100/182 (54%), Gaps = 9/182 (4%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDD--FRPVGRMS 58
MPKD + +RGIGF+TFAS DSVE +M H + G + +DRATPKE+ + +
Sbjct: 117 MPKDHSKQGYRGIGFVTFASPDSVEKVMAVKHWMNGHEIAIDRATPKEEPAALKNIFARL 176
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDL 118
G G ++ + A A +D G+ YG G G +IF+G+L ++ D+
Sbjct: 177 PMGPGQRRSFDNEAGGGLARFGGGSWDVLGAEYGHGAGGA--GPRIFIGKLTKDTGEADV 234
Query: 119 RRYFSRFGRILDVYVPK----RTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
+ YF RFG ++DVY+PK + HRGFGFVTF + R VS H + G +AID A
Sbjct: 235 KEYFMRFGYVMDVYLPKAKDNKAEHRGFGFVTFETDAAIQRVVSHGQHRLKGSTIAIDIA 294
Query: 174 TP 175
P
Sbjct: 295 MP 296
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE 149
+GE S +IFV R+P T ++YF FG++ D Y+PK + G+RG GFVTFA
Sbjct: 77 KGEPSPPRTTRIFVARIPPSVTESQFKQYFEGFGKLQDAYMPKDHSKQGYRGIGFVTFAS 136
Query: 150 EVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFM 186
++V H + G ++AID ATP ++ +N
Sbjct: 137 PDSVEKVMAVKHWMNGHEIAIDRATPKEEPAALKNIF 173
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRI--LDVYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+ V LP E T + L+ YFS++G + +V + TG RGFGFVTF + A R
Sbjct: 1 KLAVLGLPWETTEDTLKAYFSQYGTLECAEVMKDRYTGKSRGFGFVTFIDPASATRALSV 60
Query: 160 SHEICGQQVAIDSATPLDDAGPSQN 184
H I G++ A P + P +
Sbjct: 61 EHTIDGRRCEAKVALPKGEPSPPRT 85
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 1 MPKDQGSKA-HRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPK 47
+PK + +KA HRG GF+TF + +++ ++ H L GST+ +D A PK
Sbjct: 249 LPKAKDNKAEHRGFGFVTFETDAAIQRVVSHGQHRLKGSTIAIDIAMPK 297
>gi|159479752|ref|XP_001697954.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158274052|gb|EDO99837.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 316
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 101/192 (52%), Gaps = 19/192 (9%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED----------- 49
MPKD + +RGIGF+TFAS DSVE +M H + G + +DRATPKE+
Sbjct: 122 MPKDHSKQGYRGIGFVTFASPDSVEKVMAVKHWMNGHEIAIDRATPKEEPTALKNIFARL 181
Query: 50 -DFRPVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGR 108
D +G + ++A+ +A G +L ++ R G +IF+G+
Sbjct: 182 PDLNTLG--AAAAVQQMMQAAASASAASAAGRRSLDSTLKRLENPAIANARAGPRIFIGK 239
Query: 109 LPQEATAEDLRRYFSRFGRILDVYVPK----RTGHRGFGFVTFAEEVVADR-VSRRSHEI 163
L ++ + D++ YF RFG ++DVY+PK + HRGFGFVTF + R VS H +
Sbjct: 240 LTKDTSEADVKDYFMRFGYVMDVYLPKAKDNKAEHRGFGFVTFETDAAIQRVVSHGQHRL 299
Query: 164 CGQQVAIDSATP 175
G +AID A P
Sbjct: 300 KGSTIAIDIAMP 311
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
+IFV R+P T R+YF FG++ D Y+PK + G+RG GFVTFA ++V
Sbjct: 92 RIFVARIPPSVTEAQFRQYFEGFGKLQDAYMPKDHSKQGYRGIGFVTFASPDSVEKVMAV 151
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
H + G ++AID ATP ++ +N
Sbjct: 152 KHWMNGHEIAIDRATPKEEPTALKNI 177
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRI--LDVYVPKRTGH-RGFGFVTFAEEVVADRVSR 158
+K+ V LP E T E L+ YFS+FG + +V + TG RGFGFVTF + A R
Sbjct: 1 RKLAVLGLPWETTEETLKVYFSQFGALEGAEVMKDRYTGKSRGFGFVTFTDAGSATRALG 60
Query: 159 RSHEICGQQVAIDSATP 175
H I G++ A P
Sbjct: 61 VEHTIDGRRCEAKIALP 77
>gi|222631384|gb|EEE63516.1| hypothetical protein OsJ_18332 [Oryza sativa Japonica Group]
Length = 120
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 134 PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETF 193
PKR+GH GFGFVTFA++ VADRV++RSHEI GQ+VA+D+A PL+ G S + AE +
Sbjct: 20 PKRSGHGGFGFVTFADDGVADRVAQRSHEILGQEVAVDTAEPLE--GGSGGGYLEPAEAY 77
Query: 194 GGYG--GPMRTYGRMYGSLDFDDWGYG-MGSGRPSRGDWRYRPY 234
G YG G + YGR GSL + D+GYG G+ SR + RYRPY
Sbjct: 78 GPYGAYGSLLPYGRFSGSLGY-DYGYGPSGNSSRSRPESRYRPY 120
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 86/182 (47%), Gaps = 33/182 (18%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ S RG GF+TFA ++ ++ ++H + G TV V RA P+
Sbjct: 133 LMKDKFSGQPRGFGFVTFADVAVLDRVLEESHTIDGRTVEVKRAIPR------------- 179
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRI--GKKIFVGRLPQEATAEDL 118
+ S + + GA +GRG S I KK+FVG LP T +D
Sbjct: 180 -----DKTASGPSDVRSSGA----------HGRGNSGGVITESKKVFVGGLPPSVTEQDF 224
Query: 119 RRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
RRYF FGRI D V + RGFGFVTF EE V ++HE+ G+ V I A P
Sbjct: 225 RRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKTHELHGKVVEIKRAEP 284
Query: 176 LD 177
+
Sbjct: 285 KE 286
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 97 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVA 153
+Q+ K+F+G + E T E LR +F ++G + D + K +G RGFGFVTFA+ V
Sbjct: 97 AQKQPGKLFIGGVSWETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVL 156
Query: 154 DRVSRRSHEICGQQVAIDSATPLDD--AGPS 182
DRV SH I G+ V + A P D +GPS
Sbjct: 157 DRVLEESHTIDGRTVEVKRAIPRDKTASGPS 187
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 108/251 (43%), Gaps = 68/251 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E + +D H + G V +A P++D
Sbjct: 44 RDRSTGRARGFGFVVFADPAVAERVTMDKHMIDGRMVEAKKAVPRDDH------------ 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + + +++G+P G G + +KIFVG LP T D RRYF
Sbjct: 92 -----SIVSKSNASSIGSP----------GPGRT-----RKIFVGGLPSNVTEADFRRYF 131
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ +S HE+ G+ V + A P +
Sbjct: 132 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQ 191
Query: 179 A---------GPSQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD----- 211
+ G QN+ MN +F GGYG MR GR YG L
Sbjct: 192 SPGPVVRSPVGVGQNYAMNRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLSGARNG 248
Query: 212 FDDW--GYGMG 220
F + GYGMG
Sbjct: 249 FSSFGPGYGMG 259
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + + LR YF RFG + + + + TG RGFGFV FA+ VA+RV+
Sbjct: 12 KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD 71
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 72 KHMIDGRMVEAKKAVPRDD 90
>gi|242043256|ref|XP_002459499.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
gi|241922876|gb|EER96020.1| hypothetical protein SORBIDRAFT_02g005620 [Sorghum bicolor]
Length = 455
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 108/251 (43%), Gaps = 68/251 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E + +D H + G V +A P++D
Sbjct: 46 RDRSTGRARGFGFVVFADPAVAERVTMDKHMIDGRMVEAKKAVPRDDH------------ 93
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + + +++G+P G G + +KIFVG LP T D RRYF
Sbjct: 94 -----SIVSKSNASSIGSP----------GPGRT-----RKIFVGGLPSNVTEADFRRYF 133
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ +S HE+ G+ V + A P +
Sbjct: 134 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQ 193
Query: 179 A---------GPSQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD----- 211
+ G QN+ MN +F GGYG MR GR YG L
Sbjct: 194 SPGPVVRSPVGVGQNYAMNRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLSGARNG 250
Query: 212 FDDW--GYGMG 220
F + GYGMG
Sbjct: 251 FSSFGPGYGMG 261
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + + LR YF RFG + + + + TG RGFGFV FA+ VA+RV+
Sbjct: 14 KLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADPAVAERVTMD 73
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 74 KHMIDGRMVEAKKAVPRDD 92
>gi|219363315|ref|NP_001136724.1| uncharacterized protein LOC100216861 [Zea mays]
gi|194696774|gb|ACF82471.1| unknown [Zea mays]
gi|414883906|tpg|DAA59920.1| TPA: RNA-binding protein [Zea mays]
Length = 469
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 66/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA A E + ++ H + G V +A P++D
Sbjct: 41 RDRSTGRARGFGFVVFADATVAERVTIEKHMIDGRMVEAKKAVPRDDH------------ 88
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + + +++G+P G G + +KIFVG LP T D R YF
Sbjct: 89 -----SIVSKSNTSSIGSP----------GPGRT-----RKIFVGGLPSNVTEADFRGYF 128
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ +S HE+ G+ V + A P +
Sbjct: 129 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQ 188
Query: 179 ---------AGPSQNFMMNAAETF-------------GGYGGPMRT---YGRMYGS---L 210
AG QN+ MN +F GGYG MR +G++ G+ L
Sbjct: 189 SPGPVARSPAGVGQNYAMNRVHSFLNDFNQGYNPNPIGGYG--MRVDGRFGQLSGARNGL 246
Query: 211 DFDDWGYGMG 220
GYGMG
Sbjct: 247 SSFGPGYGMG 256
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV FA+ VA+RV+
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 69 KHMIDGRMVEAKKAVPRDD 87
>gi|195624752|gb|ACG34206.1| RNA-binding protein [Zea mays]
Length = 469
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 66/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA A E + ++ H + G V +A P++D
Sbjct: 41 RDRSTGRARGFGFVVFADATVAERVTIEKHMIDGRMVEAKKAVPRDDH------------ 88
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + + +++G+P G G + +KIFVG LP T D R YF
Sbjct: 89 -----SIVSKSNTSSIGSP----------GPGRT-----RKIFVGGLPSNVTEADFRGYF 128
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ +S HE+ G+ V + A P +
Sbjct: 129 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKKAVPKEQ 188
Query: 179 ---------AGPSQNFMMNAAETF-------------GGYGGPMRT---YGRMYGS---L 210
AG QN+ MN +F GGYG MR +G++ G+ L
Sbjct: 189 SPGPVARSPAGVGQNYAMNRVHSFLNDFNQGYNPNPIGGYG--MRVDGRFGQLSGARNGL 246
Query: 211 DFDDWGYGMG 220
GYGMG
Sbjct: 247 SSFGPGYGMG 256
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV FA+ VA+RV+
Sbjct: 9 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADATVAERVTIE 68
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 69 KHMIDGRMVEAKKAVPRDD 87
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 107/251 (42%), Gaps = 68/251 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA A E + +D H + G V +A P++D
Sbjct: 40 RDRSTGRARGFGFVVFADAAVAERVTMDKHTIDGRMVEAKKAVPRDDH------------ 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + + ++ G+P G G + +KIFVG LP T D RRYF
Sbjct: 88 -----SIVSKSNGSSTGSP----------GPGRT-----RKIFVGGLPSSVTEADFRRYF 127
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ +S HE+ G+ V + A P +
Sbjct: 128 EQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQ 187
Query: 179 A---------GPSQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD----- 211
+ G QN+ N +F GGYG MR GR YG L
Sbjct: 188 SPGPVVRSPVGVGQNYATNRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLSGARNG 244
Query: 212 FDDW--GYGMG 220
F + GYGMG
Sbjct: 245 FSSFGPGYGMG 255
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + + LR YF RFG + + + + TG RGFGFV FA+ VA+RV+
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTMD 67
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 68 KHTIDGRMVEAKKAVPRDD 86
>gi|122720941|gb|ABM66456.1| RNA-binding protein [Brassica juncea]
Length = 179
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 43/48 (89%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKE 48
MPKD SK HRGIGFITFA++DSVE+LM DTH+LGG+TV VDRATPKE
Sbjct: 104 MPKDHNSKQHRGIGFITFATSDSVEDLMEDTHDLGGTTVAVDRATPKE 151
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG G++TFAS+ + + H LG + V ATPKE+ +P +++
Sbjct: 18 KDRSTGRSRGFGYVTFASSQDAKEALKGEHFLGNRILEVKVATPKEEMRQPAKKVT---- 73
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+IFV R+P + D RR+F
Sbjct: 74 ----------------------------------------RIFVARIPPSVSESDFRRHF 93
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++G I D+Y+PK HRG GF+TFA + + +H++ G VA+D ATP
Sbjct: 94 EKYGEITDLYMPKDHNSKQHRGIGFITFATSDSVEDLMEDTHDLGGTTVAVDRATP 149
>gi|356509793|ref|XP_003523630.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 384
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 16/177 (9%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRM-SHGGY 62
D+ +++ RG GF+TF+ + + + DTH + G TV V +A P+ + + + S GG
Sbjct: 44 DRTTRSPRGFGFVTFSDLSAADKALQDTHVILGRTVEVKKAIPRSEQHQHQNPLQSRGGG 103
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
YN + DH KKIFVG LP + E+ + YF
Sbjct: 104 YYYNNNNNNNDDNNNNSNDYCSDH-----------NVRTKKIFVGGLPAGISEEEFKNYF 152
Query: 123 SRFGRILDVYVPKRTGH---RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
RFGRI DV V + + RGFGF+TF +EE V + + + H++ G+QV + A P
Sbjct: 153 ERFGRITDVVVMQDSVTHRPRGFGFITFESEESVQNVMVKSFHDLNGRQVEVKRAVP 209
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRT-GHRGFGFVTFAEEVVADRVSRR 159
K+FVG + ++ T L+ +F+++G + D + V + T RGFGFVTF++ AD+ +
Sbjct: 11 KLFVGGISRDTTEHVLKLHFAKYGVVSDSTISVDRTTRSPRGFGFVTFSDLSAADKALQD 70
Query: 160 SHEICGQQVAIDSATPLDDAGPSQN 184
+H I G+ V + A P + QN
Sbjct: 71 THVILGRTVEVKKAIPRSEQHQHQN 95
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 5 QGSKAHR--GIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
Q S HR G GFITF S +SV+N+MV + H+L G V V RA PKE
Sbjct: 165 QDSVTHRPRGFGFITFESEESVQNVMVKSFHDLNGRQVEVKRAVPKE 211
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 109/251 (43%), Gaps = 68/251 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA A E + + H + G V +A P++D
Sbjct: 40 RDRSTGRARGFGFVVFADAAVAERVTTEKHMIDGRMVEAKKAVPRDDH------------ 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + +++G+P G G + +KIFVG LP T D RRYF
Sbjct: 88 -----SIVTKSNASSIGSP----------GPGRT-----RKIFVGGLPSNVTEADFRRYF 127
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ +S HE+ G+ V + A P +
Sbjct: 128 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEVKRAVPKEQ 187
Query: 179 A-GPS--------QNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD----- 211
+ GP+ QN+ MN +F GGYG +R GR YG +
Sbjct: 188 SPGPAARSPVGVGQNYAMNRVHSFLNGFNQGYNPNPIGGYG--IRVDGR-YGLISGARNG 244
Query: 212 FDDW--GYGMG 220
F + GYGMG
Sbjct: 245 FSSFGPGYGMG 255
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + + LR YF RFG + + + + TG RGFGFV FA+ VA+RV+
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERVTTE 67
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 68 KHMIDGRMVEAKKAVPRDD 86
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 105/249 (42%), Gaps = 65/249 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + E +++D H + G TV +A P++D
Sbjct: 39 RDRTTGRARGFGFVVFADPSAAERVIMDKHIIDGRTVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
T+ GS +G + KKIFVG LP T D ++YF
Sbjct: 87 ------------------QTINRQTGSIHGSPSPGRT--KKIFVGGLPSTITESDFKKYF 126
Query: 123 SRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQ------NFMMNAAETF-------------GGYGGPMRTYGRM-------YGSLD 211
GP++ N+ +N +F GGYG +R GR G
Sbjct: 187 SPGPTRSPLIGYNYGLNRTSSFLNSYAQGFNMNPIGGYG--VRMDGRFSPLTSARSGFTP 244
Query: 212 FDDWGYGMG 220
F GYGMG
Sbjct: 245 FGSSGYGMG 253
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF ++G +++ + + TG RGFGFV FA+ A+RV
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 49/205 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +SV+ ++ V H L G + ATPK
Sbjct: 135 KDPITQRSRGFGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATPKN------------- 181
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R ++ KKIFVG + Q+ +AE++R+Y
Sbjct: 182 -------------------------------RPKTQSNKTKKIFVGGVSQDTSAEEVRQY 210
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 211 FSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 270
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRT 202
P+ ++ G G P+ T
Sbjct: 271 AVTPTAQQLLQKRIILGNLGLPIAT 295
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 88 GSFYGR---GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRG 141
GS GR SS K+FVG L + ++E L YF FG++ DV + P RG
Sbjct: 85 GSSSGRSTPNSSSDPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRG 144
Query: 142 FGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
FGF+TF E D+V + H + G+++ ATP
Sbjct: 145 FGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATP 179
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 222 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 270
>gi|224129796|ref|XP_002320673.1| predicted protein [Populus trichocarpa]
gi|222861446|gb|EEE98988.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPV-GRMSHGG 61
KDQ +K RG F+ F+ A S + D+H + G TV V +A PK + + R HG
Sbjct: 39 KDQITKLPRGFAFVVFSEAASAARALQDSHVICGRTVEVKKAIPKTEKHQEHRQRHPHGN 98
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ G+ D+ G + KKIFVG L T E R Y
Sbjct: 99 -----------QETASNGSGMNSDN-----STGNVNYYRTKKIFVGGLSSSLTDEQFRNY 142
Query: 122 FSRFGRILDVYVPKRTGH--RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
F +FGR +D V + + + R FGFVTF E A +V R S HE+ G+ V + A P D
Sbjct: 143 FEKFGRTVDAIVMQDSSNKPRSFGFVTFDSEESAAKVMRNSFHELNGKTVEVKKAVPKD 201
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG +P+ + + LR +FS++G + + V K RGF FV F+E A R +
Sbjct: 6 RKLFVGGIPRGTSEDTLRDHFSKYGVVSHLLVAKDQITKLPRGFAFVVFSEAASAARALQ 65
Query: 159 RSHEICGQQVAIDSATP 175
SH ICG+ V + A P
Sbjct: 66 DSHVICGRTVEVKKAIP 82
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 7 SKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
S R GF+TF S +S +M ++ HEL G TV V +A PK+ +G S G+
Sbjct: 159 SNKPRSFGFVTFDSEESAAKVMRNSFHELNGKTVEVKKAVPKDRVNGDIGSCSSNGF 215
>gi|258597221|ref|XP_001347758.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
gi|254832603|gb|AAN35671.2| nucleic acid binding protein, putative [Plasmodium falciparum 3D7]
Length = 588
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 63/95 (66%), Gaps = 10/95 (10%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSR- 158
+IF RLP EA+ +DL +YFS+FG+I+D+YV + ++GFGFV+F ++ ++V +
Sbjct: 227 RIFATRLPFEASKKDLEKYFSKFGKIVDIYVSRNISNNKNKGFGFVSFEKQESMNKVLKE 286
Query: 159 RSHEICGQQVAIDSATPLDDA------GPSQNFMM 187
+ H ICG+++ +D A+ DD PS+N++M
Sbjct: 287 KLHIICGKEIVVDVASMRDDKYKHLFHMPSENYLM 321
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTF--- 147
G+ + G K+FV +L T E LR YF +FG I+D+Y+P RG FVTF
Sbjct: 494 GDEWNKRGYKLFVTKLNSATTIEKLRNYFEKFGEIIDIYMPNDVYTNRPRGIAFVTFLDN 553
Query: 148 --AEEVVADRVSRRSHEICGQQVAIDSATP 175
+ +++D S+ H I G++V +D A P
Sbjct: 554 ESVKNILSDEHSK--HIIDGKEVVLDLADP 581
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHE---LGGSTVVVDRATPK 47
MP D + RGI F+TF +SV+N++ D H + G VV+D A P+
Sbjct: 533 MPNDVYTNRPRGIAFVTFLDNESVKNILSDEHSKHIIDGKEVVLDLADPE 582
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 84/203 (41%), Gaps = 49/203 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVEN-LMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +SV+ L V H L G + ATPK
Sbjct: 144 KDPVTQRSRGFGFITFQEPNSVDKVLQVPIHTLDGKKIDPKHATPKN------------- 190
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R ++ KKIFVG + Q+ +AE+++ Y
Sbjct: 191 -------------------------------RPKTQSNKTKKIFVGGVSQDTSAEEVKAY 219
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 220 FSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 279
Query: 178 DAGPSQNFMMNAAETFGGYGGPM 200
P+ ++ G G PM
Sbjct: 280 AVAPTAQQLLQKRIILGNLGVPM 302
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E L YF FG + DV + P RGFGF+TF E D+V +
Sbjct: 112 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 171
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 172 PIHTLDGKKIDPKHATP 188
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 231 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 279
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 37/190 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + E +++D H + G TV +A P++D
Sbjct: 39 RDRTTGRARGFGFVVFADPSAAERVIMDKHIIDGRTVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
T+ GS +G + KKIFVG LP T D ++YF
Sbjct: 87 ------------------QTINRQSGSIHGSPSPGRT--KKIFVGGLPSTITESDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQNFMM 187
GP+++ ++
Sbjct: 187 SPGPTRSPLI 196
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF ++G +++ + + TG RGFGFV FA+ A+RV
Sbjct: 7 KLFIGGISWDTDDERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 84/203 (41%), Gaps = 49/203 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVEN-LMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +SV+ L V H L G + ATPK
Sbjct: 215 KDPVTQRSRGFGFITFQEPNSVDKVLQVPIHTLDGKKIDPKHATPKN------------- 261
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R ++ KKIFVG + Q+ +AE+++ Y
Sbjct: 262 -------------------------------RPKTQSNKTKKIFVGGVSQDTSAEEVKAY 290
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 291 FSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 350
Query: 178 DAGPSQNFMMNAAETFGGYGGPM 200
P+ ++ G G PM
Sbjct: 351 AVAPTAQQLLQKRIILGNLGVPM 373
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E L YF FG + DV + P RGFGF+TF E D+V +
Sbjct: 183 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 242
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 243 PIHTLDGKKIDPKHATP 259
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 302 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 350
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 86/203 (42%), Gaps = 49/203 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +SV+ ++ V H L G + ATPK
Sbjct: 200 KDPITQRSRGFGFITFQEPNSVDKVLKVPIHTLDGKKIDPKHATPK-------------- 245
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R ++ KKIFVG + Q+ +AE++++Y
Sbjct: 246 ------------------------------NRPKTQSNKTKKIFVGGVSQDTSAEEVKQY 275
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 276 FSQFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVECKKAQPKE 335
Query: 178 DAGPSQNFMMNAAETFGGYGGPM 200
P+ ++ G G P+
Sbjct: 336 AVTPTAQQLLQKRIILGNLGLPI 358
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E L YF FG++ DV + P RGFGF+TF E D+V +
Sbjct: 168 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLKV 227
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 228 PIHTLDGKKIDPKHATP 244
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF D V+ + + H + V +A PKE
Sbjct: 287 MLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVECKKAQPKE 335
>gi|82538759|ref|XP_723811.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478234|gb|EAA15376.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 498
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADR-VSR 158
+IFV RLP E +DL +YFS++G+I+D+YV K ++GFGFV+F ++ D+ +S
Sbjct: 215 RIFVTRLPFEVNKKDLEKYFSKYGKIIDIYVSKNLSNNKNKGFGFVSFENQISMDKALSE 274
Query: 159 RSHEICGQQVAIDSAT 174
+ H ICG+++ +D A+
Sbjct: 275 KLHIICGKEIVVDIAS 290
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 30/179 (16%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+++ + RG GF+ FA + ++ ++ D H + G TV +A +ED + + S GG
Sbjct: 39 REKNTGKPRGFGFVVFADPNILDRVLEDKHVIDGRTVDAKKAFSRED--QQISVTSRGG- 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ S G KKIFVG LP T E R+YF
Sbjct: 96 -----------------------NSNSGMNSGNGGNIRTKKIFVGGLPPTLTEEKFRQYF 132
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+G + DV V + TG RGFGF++F E DRV +S H++ G+QV + A P D
Sbjct: 133 ESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFHDLNGKQVEVKRALPKD 191
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 90/202 (44%), Gaps = 42/202 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A P+ DD + R S G
Sbjct: 39 KDRTTGRARGFGFVVFADPAVAERVIKEKHSIDGRMVEAKKAVPR-DDQNILNRNSGG-- 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+++ PG GR KKIFVG L T D + YF
Sbjct: 96 -------------------SIHSSPGP--GRT-------KKIFVGGLASTVTENDFKNYF 127
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I+DV V RGFGF+TF E D+V R+ HE+ G+ V + A P +
Sbjct: 128 DQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMRTFHELNGKMVEVKRAVPKEL 187
Query: 178 DAGPSQ------NFMMNAAETF 193
GPS+ N+ +N +F
Sbjct: 188 SPGPSRSPLGGYNYGLNRVNSF 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF FG +++ + K TG RGFGFV FA+ VA+RV +
Sbjct: 7 KLFIGGISWDTDEERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + N+ + GP RT G L
Sbjct: 67 KHSIDGRMVEAKKAVPRDD----QNILNRNSGGSIHSSPGPGRTKKIFVGGL 114
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 87/190 (45%), Gaps = 37/190 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E ++VD H + G TV +A P++D
Sbjct: 39 RDRTTGRARGFGFVVFADPAVAERVIVDKHMIDGRTVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+I + G+P G G + KKIFVG L T D ++YF
Sbjct: 87 -----HILNRNTSSIHGSP----------GPGRT-----KKIFVGGLASTVTDNDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 EQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQNFMM 187
GPS++ ++
Sbjct: 187 SPGPSRSPLI 196
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS++G +++ + + TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIVD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHILNRNTSSIHGSPGPGRTKKIFVGGL 113
>gi|307110322|gb|EFN58558.1| hypothetical protein CHLNCDRAFT_140687 [Chlorella variabilis]
Length = 619
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 80 APTLYD-HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--- 135
APT+ + GS G +S R G +IF+G+L ++ + +D++ +F RFG +LDVY+P+
Sbjct: 456 APTMSSSNSGSL---GPASARAGPRIFIGKLNKDTSEQDVKDHFMRFGFVLDVYLPRDKN 512
Query: 136 -RTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 175
+ HRGFGFVTF E R V+ H I G VAIDSA P
Sbjct: 513 NKREHRGFGFVTFETEAAIQRVVAHGPHHIKGSIVAIDSAVP 554
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMS 58
MPKD + HRGIGF+T++S +SVE +M TH L G+ + +DRATPKE GR+S
Sbjct: 106 MPKDPSKQGHRGIGFVTYSSPESVELVMSQTHVLNGNEIAIDRATPKEKTTLLPGRLS 163
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 124 RFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD-- 178
+FG D Y+PK + GHRG GFVT++ + V ++H + G ++AID ATP +
Sbjct: 97 KFGICQDCYMPKDPSKQGHRGIGFVTYSSPESVELVMSQTHVLNGNEIAIDRATPKEKTT 156
Query: 179 ------AGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
+ N M A + GG YG M G
Sbjct: 157 LLPGRLSMSQPNLQMAGASSHGG-----SQYGLMRG 187
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 1 MPKDQGSK-AHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDF 51
+P+D+ +K HRG GF+TF + +++ ++ H + GS V +D A P++++
Sbjct: 507 LPRDKNNKREHRGFGFVTFETEAAIQRVVAHGPHHIKGSIVAIDSAVPRQEEV 559
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEV 151
E S+ +K+ V +P + L+++F +FG + + + K TG RGFGFVTF
Sbjct: 11 ELSELEQRKVVVLGVPWQTDDSTLQQHFCQFGVVEEAQIMREKYTGKSRGFGFVTFRSTT 70
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMM 187
A + H I G++ A P G Q+ M
Sbjct: 71 DALKAVNAEHCIDGRKCEAKFALPEGKFGICQDCYM 106
>gi|115473043|ref|NP_001060120.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa
Japonica Group]
gi|113611656|dbj|BAF22034.1| Os07g0584500 [Oryza sativa Japonica Group]
gi|215695373|dbj|BAG90564.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 472
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 67/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F A E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFVVFTDAGVAERVTMDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I++ +++G+P G G + +KIFVG L T + RRYF
Sbjct: 87 -----SITSKNNGSSIGSP----------GPGRT-----RKIFVGGLASNVTEVEFRRYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 127 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 186
Query: 179 A-GPS-------QNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP+ QN+ M+ +F GGYG MR GR YG L F
Sbjct: 187 SPGPAARSPAGGQNYAMSRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLTGARNGF 243
Query: 213 DDW--GYGMG 220
+ GYGMG
Sbjct: 244 SSFGPGYGMG 253
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YFSRFG + + + + TG RGFGFV F + VA+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFSRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|218199915|gb|EEC82342.1| hypothetical protein OsI_26646 [Oryza sativa Indica Group]
Length = 472
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 67/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F A E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFVVFTDAGVAERVTMDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I++ +++G+P G G + +KIFVG L T + RRYF
Sbjct: 87 -----SITSKNNGSSIGSP----------GPGRT-----RKIFVGGLASNVTEVEFRRYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 127 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 186
Query: 179 A-GPS-------QNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP+ QN+ M+ +F GGYG MR GR YG L F
Sbjct: 187 SPGPAARSPAGGQNYAMSRVHSFLNGFNQGYNPNPIGGYG--MRVDGR-YGLLTGARNGF 243
Query: 213 DDW--GYGMG 220
+ GYGMG
Sbjct: 244 SSFGPGYGMG 253
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV F + VA+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFTDAGVAERVTMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|68074213|ref|XP_679021.1| nucleic acid binding factor [Plasmodium berghei strain ANKA]
gi|56499660|emb|CAH99922.1| nucleic acid binding factor, putative [Plasmodium berghei]
Length = 491
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADR-VSR 158
+IFV RLP E +DL +YFS++G+I+D+Y+ K ++GFGFV+F ++ D+ +S
Sbjct: 107 RIFVTRLPFEVNKKDLEKYFSKYGKIIDIYISKNLSNNKNKGFGFVSFENQISMDKALSE 166
Query: 159 RSHEICGQQVAIDSAT 174
+ H ICG+++ +D A+
Sbjct: 167 KLHIICGKEIVVDVAS 182
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAE-EVVADRVSR 158
K+FV +L T E LR YF +G I+D+Y+P RG FVTF + E V +S
Sbjct: 404 KLFVTKLNSVTTIETLRNYFESYGEIIDIYMPNDICTNKPRGIAFVTFLDSECVKKILSN 463
Query: 159 RS--HEICGQQVAI 170
++ H I G++V I
Sbjct: 464 KNYKHIIDGKEVNI 477
>gi|255537972|ref|XP_002510051.1| DAZ-associated protein, putative [Ricinus communis]
gi|223550752|gb|EEF52238.1| DAZ-associated protein, putative [Ricinus communis]
Length = 370
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 17/188 (9%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ +K RG GF+ F+ + V+ + D+H + G TV V +A PK + +
Sbjct: 37 VAKDKITKNSRGFGFVWFSDSAFVDKALQDSHVILGRTVEVKKAIPKTEQLQ-------- 88
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
++ Y + G G R KKIFVG L T E +
Sbjct: 89 ----FHRYQQQQQWQFPNQQKNSRLSESNGNGNGGDYFRT-KKIFVGGLSSSLTEEQFKD 143
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPL 176
YF FG+I+DV V + + RGFGFVTF E D+ ++ HE+ G++V + A P
Sbjct: 144 YFESFGKIVDVVVMQDSSTNRPRGFGFVTFDSEDSVDKAMEKTFHELMGKRVEVKRAVPK 203
Query: 177 DDAGPSQN 184
++ + N
Sbjct: 204 EEISGTIN 211
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIFVG + ++ + + LR +FS++G + V K RGFGFV F++ D+ +
Sbjct: 7 KIFVGGISRDTSEDALRVHFSKYGTVSGSLVAKDKITKNSRGFGFVWFSDSAFVDKALQD 66
Query: 160 SHEICGQQVAIDSATP 175
SH I G+ V + A P
Sbjct: 67 SHVILGRTVEVKKAIP 82
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 106/248 (42%), Gaps = 63/248 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F E +++D H + G TV +A P+ DD + + R S
Sbjct: 73 RDRVTGRARGFGFVVFGDPSVAERVIMDKHIIDGRTVEAKKAVPR-DDQQNINRQS---- 127
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G+ + PG KKIFVG LP T D + YF
Sbjct: 128 ----------------GSAHVSPGPGRT-----------KKIFVGGLPSTITESDFKTYF 160
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 161 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKEL 220
Query: 178 DAGPSQ--------------NFMMNAAETF-----GGYGGPM------RTYGRMYGSLDF 212
GPS+ N++ + A+ + GGYG M T GR G F
Sbjct: 221 SPGPSRSPLIGYNYGLTRASNYLNSYAQGYNMSPIGGYGVRMDGRFSPLTSGRS-GLTPF 279
Query: 213 DDWGYGMG 220
+ GYGMG
Sbjct: 280 GNTGYGMG 287
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF ++G +++ + + TG RGFGFV F + VA+RV
Sbjct: 41 KLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAERVIMD 100
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 101 KHIIDGRTVEAKKAVPRDD 119
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 38/183 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+++ + RG GF+ FA + ++ ++ D H + G TV +A +ED
Sbjct: 39 REKNTGKPRGFGFVVFADPNILDRVLEDKHVIDGRTVDAKKAFSREDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIG----KKIFVGRLPQEATAEDL 118
IS +R G G +S+ G KKIFVG LP T E
Sbjct: 87 -----QISVTSR-------------GGNSNSGMNSENGGNIRTKKIFVGGLPPTLTEEKF 128
Query: 119 RRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSAT 174
R YF +G + DV V + TG RGFGF++F E DRV +S H++ G+QV + A
Sbjct: 129 RLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGKQVEVKRAL 188
Query: 175 PLD 177
P D
Sbjct: 189 PKD 191
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + T + L+ +F +G +L V K TG RGFGFV FA+ + DRV
Sbjct: 7 KLFIGGISWDTTEDKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLED 66
Query: 160 SHEICGQQVAIDSATPLDDA-------GPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A +D G + N MN+ GG +RT G L
Sbjct: 67 KHVIDGRTVDAKKAFSREDQQISVTSRGGNSNSGMNSEN-----GGNIRTKKIFVGGL 119
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRM 57
DQ + RG GFI+F + ++V+ ++ + H+L G V V RA PK+ + GRM
Sbjct: 146 DQNTGRPRGFGFISFDTEEAVDRVLHKSFHDLNGKQVEVKRALPKDANPGASGRM 200
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 37/190 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E +++D H + G TV +A P+ DD + + R S
Sbjct: 39 RDRVTGRARGFGFVVFADPSVAERVIMDKHIIDGRTVEAKKAVPR-DDQQNINRQS---- 93
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +A+ G PG KKIFVG LP T D + YF
Sbjct: 94 ---------GSAHASPG-------PGRT-----------KKIFVGGLPSTITESDFKMYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQNFMM 187
GPS++ ++
Sbjct: 187 SPGPSRSPLI 196
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF ++G +++ + + TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
>gi|422296095|gb|EKU23394.1| RNA-binding protein Musashi, partial [Nannochloropsis gaditana
CCMP526]
Length = 240
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 32/176 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF++FA+ ++E + + H L G + V +A P+E PV R GG
Sbjct: 78 RDKNTGGPRGFGFVSFATPAAMEAAVSEAHMLDGRNLDVKKAVPREQAPAPV-RAIWGGT 136
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA G Q I KK+FVG L + T E R YF
Sbjct: 137 GA---------------------------GPQRQFQDI-KKVFVGGLSPDVTEEAFRAYF 168
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FG I D V + + TG RGFGFVT+AEE +V + H++ G+ + + A P
Sbjct: 169 DKFGEITDAVVMMDRTTGRSRGFGFVTYAEEAAMKKVLSQQHDMEGRPMDVKRAEP 224
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRT---GHRGFGFVTFA 148
G GE +Q KIFVG + T E L YF ++G + DV + + G RGFGFV+FA
Sbjct: 37 GHGEYNQP--NKIFVGGVAWHTTEEGLSSYFGKYGELTDVVLMRDKNTGGPRGFGFVSFA 94
Query: 149 EEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
+ +H + G+ + + A P + A
Sbjct: 95 TPAAMEAAVSEAHMLDGRNLDVKKAVPREQA 125
>gi|297803432|ref|XP_002869600.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315436|gb|EFH45859.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E +++D H + G TV +A P++D
Sbjct: 48 RDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ------------ 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
R+A +P P S G G ++ KKIFVG LP T + + YF
Sbjct: 96 -------QVLKRHA---SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYF 142
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--L 176
+FG I DV V RGFGF+TF E D V ++ HE+ G+ V + A P L
Sbjct: 143 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKEL 202
Query: 177 DDAGPSQNFMMNAAETFG 194
P+++ ++ A +G
Sbjct: 203 SSTTPNRSPLIGYANNYG 220
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEV 151
ES+ +GK +F+G + + E L+ YF ++G +++ + + TG RGFGF+ FA+
Sbjct: 9 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 67
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 204
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 68 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 123
Query: 205 RMYGSL 210
G L
Sbjct: 124 IFVGGL 129
>gi|356514529|ref|XP_003525958.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 378
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYG 63
D+ +++ RG GF+TF+ + + + DTH + G TV V +A P+ + + ++ G
Sbjct: 44 DRTTRSPRGFGFVTFSDLSAADKALQDTHVILGRTVEVKKAIPRSEQHQHQNQL-QSRVG 102
Query: 64 AYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFS 123
Y + + + Y+ KKIFVG LP + E+ + YF
Sbjct: 103 GYYNNNNNNNNNYSNDCSSDYN-------------VRTKKIFVGGLPAGISEEEFKNYFE 149
Query: 124 RFGRILDVYVPKRTGH---RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
RFGRI DV V + + RGFGF+TF +E+ V + + + H++ G+QV + A P
Sbjct: 150 RFGRITDVVVMQDSVTHRPRGFGFITFESEDSVQNVMVKSFHDLNGRQVEVKRAVP 205
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRT-GHRGFGFVTFAEEVVADRVSRR 159
K+FVG + ++ T + L+ +F+++G + D + V + T RGFGFVTF++ AD+ +
Sbjct: 11 KLFVGGISRDTTEDVLKLHFAKYGVVSDSTISVDRTTRSPRGFGFVTFSDLSAADKALQD 70
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMN 188
+H I G+ V + A P + QN + +
Sbjct: 71 THVILGRTVEVKKAIPRSEQHQHQNQLQS 99
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 5 QGSKAHR--GIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
Q S HR G GFITF S DSV+N+MV + H+L G V V RA PKE
Sbjct: 161 QDSVTHRPRGFGFITFESEDSVQNVMVKSFHDLNGRQVEVKRAVPKE 207
>gi|297796435|ref|XP_002866102.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
gi|297311937|gb|EFH42361.1| hypothetical protein ARALYDRAFT_495641 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E ++++ H + G TV +A P++D
Sbjct: 39 RDRATGRARGFGFIVFADPCVSERVIMEKHIIDGRTVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
R+A+ P P G G + KKIFVG LP T E+ + YF
Sbjct: 87 -------QVLKRHAS---PIQLMSPVHGGGGGRT-----KKIFVGGLPSSITEEEFKNYF 131
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+TF + DRV ++ HE+ G+ V + A P +
Sbjct: 132 DQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKET 191
Query: 179 AGPSQN 184
+ S N
Sbjct: 192 SPVSNN 197
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YFS +G +++ + + TG RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIME 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG- 61
D ++ RG GFITF S D+V+ ++ T HEL G V V RA PKE R G
Sbjct: 145 DHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKETSPVSNNRSPLPGG 204
Query: 62 --YGAYNAYISAATRYAALG-APTLYDHPGSFYGR 93
YG + ISA + + P Y++ G GR
Sbjct: 205 LNYGGGSNRISANSYFNNFAPGPGFYNNLGPVGGR 239
>gi|242046120|ref|XP_002460931.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
gi|241924308|gb|EER97452.1| hypothetical protein SORBIDRAFT_02g037690 [Sorghum bicolor]
Length = 471
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 108/250 (43%), Gaps = 67/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFVVFADSGIAERVTMDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I++ +++G+P G G + +KIFVG L T + RRYF
Sbjct: 87 -----SIASKNNGSSIGSP----------GPGRT-----RKIFVGGLASNVTEVEFRRYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 127 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 186
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP QN+ M+ F GGYG MR GR YG L F
Sbjct: 187 SPGPIARSPVGGQNYAMSRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGF 243
Query: 213 DDW--GYGMG 220
+ GYGMG
Sbjct: 244 SSFGPGYGMG 253
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|449463715|ref|XP_004149577.1| PREDICTED: uncharacterized protein LOC101220541 [Cucumis sativus]
gi|449517233|ref|XP_004165650.1| PREDICTED: uncharacterized protein LOC101224873 [Cucumis sativus]
Length = 480
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 36/177 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E +++D H + G TV +A PK+D
Sbjct: 39 RDRTTGRARGFGFVVFADPGVAERVILDKHVIDGRTVEAKKAVPKDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L GS +G S + KKIFVG L T D ++YF
Sbjct: 87 ------------------NMLNRSSGSIHGSPSSGRT--KKIFVGGLASTVTEADFQKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P
Sbjct: 127 DQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKRAIP 183
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YF +G +++ + + TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVAERVILD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + ++ + G RT G L
Sbjct: 67 KHVIDGRTVEAKKAVPKDD----QNMLNRSSGSIHGSPSSGRTKKIFVGGL 113
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFIT+ S + V+ ++ T HEL G V V RA PKE
Sbjct: 140 DHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKRAIPKE 185
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 37/190 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F+ E +++D H + G TV +A P+ DD + + R +
Sbjct: 39 RDRATGRARGFGFVVFSDPAVAERVIIDKHIIDGRTVEAKKAVPR-DDQQNINRQTG--- 94
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ G+P G G + KKIFVG LP T D + YF
Sbjct: 95 -------------SVQGSP----------GPGRT-----KKIFVGGLPSTITESDFKMYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQNFMM 187
GP+++ ++
Sbjct: 187 SPGPTRSPLI 196
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF+ +G +++ + + TG RGFGFV F++ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVIID 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q + + G GP RT G L
Sbjct: 67 KHIIDGRTVEAKKAVPRDD----QQNINRQTGSVQGSPGPGRTKKIFVGGL 113
>gi|224089693|ref|XP_002308799.1| predicted protein [Populus trichocarpa]
gi|222854775|gb|EEE92322.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 37/187 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++++ H + G V +A P+ED
Sbjct: 39 KDRATGRARGFGFVVFADPAVAERVVMEKHLIDGRNVEAKKAVPREDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
TL + S G ++ KKIFVG L T D R+YF
Sbjct: 87 ------------------NTLNKNSSSVNGSPGPART--KKIFVGGLASTVTESDFRKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGVITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQN 184
GP++N
Sbjct: 187 SPGPARN 193
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + L+ YF FG +L+ + K TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P +D QN + + + G GP RT G L
Sbjct: 67 KHLIDGRNVEAKKAVPRED----QNTLNKNSSSVNGSPGPARTKKIFVGGL 113
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 43 RDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 89
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT ++ + +F
Sbjct: 90 -----------------------------------QEKTSKIFVGGVSQEATEQEFKEFF 114
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + R ICG+ + + A P
Sbjct: 115 TQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLAICGKPIEVKKAQP 170
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSR 158
+K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V
Sbjct: 10 RKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 69
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H + G+ + A P D+
Sbjct: 70 KEHYLDGKIIDPKRAIPRDE 89
>gi|414887334|tpg|DAA63348.1| TPA: hypothetical protein ZEAMMB73_769138, partial [Zea mays]
Length = 467
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 66/255 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFVVFADSGIAERVTLDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+ +++G+P G G + +KIFVG L T + RRYF
Sbjct: 87 ------SIASKNNSSIGSP----------GPGRT-----RKIFVGGLASNVTEVEFRRYF 125
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 126 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 185
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP QN+ M+ F GGYG MR GR YG L F
Sbjct: 186 SPGPIARSPAGGQNYAMSRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGF 242
Query: 213 DDWGYGMGSGRPSRG 227
+G G G G + G
Sbjct: 243 SSFGPGYGMGMNAEG 257
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|22531168|gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 48/185 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDD------FRPVGR 56
+D+ + RG GFI FA E +++D H + G TV +A P++D P+
Sbjct: 39 RDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHL 98
Query: 57 MS--HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEAT 114
MS HGG G KKIFVG LP T
Sbjct: 99 MSPVHGGGGRT------------------------------------KKIFVGGLPSSIT 122
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAI 170
E+ + YF +FG I DV V RGFGF+TF + DRV ++ HE+ G+ V +
Sbjct: 123 EEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEV 182
Query: 171 DSATP 175
A P
Sbjct: 183 KRAVP 187
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YFS +G +++ + + TG RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFITF S D+V+ ++ T HEL G V V RA PKE
Sbjct: 144 DHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKE 189
>gi|224061141|ref|XP_002300356.1| predicted protein [Populus trichocarpa]
gi|222847614|gb|EEE85161.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 37/190 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E ++++ H + G TV +A P++D
Sbjct: 39 RDRVTGRARGFGFVVFADPIVAERVIMEKHVVDGRTVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+I + + G+P G G + KKIFVG L T D ++YF
Sbjct: 87 -----HILSRNTSSIHGSP----------GPGRT-----KKIFVGGLASTVTENDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 EQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQNFMM 187
GPS++ +M
Sbjct: 187 SPGPSRSPLM 196
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS++G +++ + + TG RGFGFV FA+ +VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVAERVIME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H + G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHVVDGRTVEAKKAVPRDD----QHILSRNTSSIHGSPGPGRTKKIFVGGL 113
>gi|414887335|tpg|DAA63349.1| TPA: hypothetical protein ZEAMMB73_769138 [Zea mays]
Length = 342
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 66/255 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFVVFADSGIAERVTLDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+ +++G+P G G + +KIFVG L T + RRYF
Sbjct: 87 ------SIASKNNSSIGSP----------GPGRT-----RKIFVGGLASNVTEVEFRRYF 125
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 126 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 185
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP QN+ M+ F GGYG MR GR YG L F
Sbjct: 186 SPGPIARSPAGGQNYAMSRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGF 242
Query: 213 DDWGYGMGSGRPSRG 227
+G G G G + G
Sbjct: 243 SSFGPGYGMGMNAEG 257
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|18423760|ref|NP_568826.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42573682|ref|NP_974937.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|15292725|gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20465895|gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332009263|gb|AED96646.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009264|gb|AED96647.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 460
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 48/185 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDD------FRPVGR 56
+D+ + RG GFI FA E +++D H + G TV +A P++D P+
Sbjct: 39 RDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHL 98
Query: 57 MS--HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEAT 114
MS HGG G KKIFVG LP T
Sbjct: 99 MSPVHGGGGRT------------------------------------KKIFVGGLPSSIT 122
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAI 170
E+ + YF +FG I DV V RGFGF+TF + DRV ++ HE+ G+ V +
Sbjct: 123 EEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEV 182
Query: 171 DSATP 175
A P
Sbjct: 183 KRAVP 187
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YFS +G +++ + + TG RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFITF S D+V+ ++ T HEL G V V RA PKE
Sbjct: 144 DHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKE 189
>gi|30696616|ref|NP_851195.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|334188426|ref|NP_001190546.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009262|gb|AED96645.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009265|gb|AED96648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 448
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 48/185 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDD------FRPVGR 56
+D+ + RG GFI FA E +++D H + G TV +A P++D P+
Sbjct: 39 RDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHL 98
Query: 57 MS--HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEAT 114
MS HGG G KKIFVG LP T
Sbjct: 99 MSPVHGGGGRT------------------------------------KKIFVGGLPSSIT 122
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAI 170
E+ + YF +FG I DV V RGFGF+TF + DRV ++ HE+ G+ V +
Sbjct: 123 EEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEV 182
Query: 171 DSATP 175
A P
Sbjct: 183 KRAVP 187
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YFS +G +++ + + TG RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFITF S D+V+ ++ T HEL G V V RA PKE
Sbjct: 144 DHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKE 189
>gi|9758187|dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 48/185 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDD------FRPVGR 56
+D+ + RG GFI FA E +++D H + G TV +A P++D P+
Sbjct: 39 RDRATGRARGFGFIVFADPCVSERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHL 98
Query: 57 MS--HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEAT 114
MS HGG G KKIFVG LP T
Sbjct: 99 MSPVHGGGGRT------------------------------------KKIFVGGLPSSIT 122
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAI 170
E+ + YF +FG I DV V RGFGF+TF + DRV ++ HE+ G+ V +
Sbjct: 123 EEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEV 182
Query: 171 DSATP 175
A P
Sbjct: 183 KRAVP 187
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YFS +G +++ + + TG RGFGF+ FA+ V++RV
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGRTVEAKKAVPRDD 85
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFITF S D+V+ ++ T HEL G V V RA PKE
Sbjct: 144 DHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKE 189
>gi|225460779|ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E +++D H + G TV +A P++D
Sbjct: 39 RDRTTGRARGFGFVVFADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQH----------- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L + GS +G + KKIFVG L T D ++YF
Sbjct: 88 -------------------LLNRNTGSIHGSPGPGRT--KKIFVGGLASTVTESDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E +RV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKEH 186
Query: 179 A-GPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGM 219
+ GPS++ ++ G + YG+ Y +G M
Sbjct: 187 SPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRM 228
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + L+ YF +G +++ + + TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHLLNRNTGSIHGSPGPGRTKKIFVGGL 113
>gi|79325275|ref|NP_001031725.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332659833|gb|AEE85233.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 452
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E +++D H + G TV +A P++D
Sbjct: 45 RDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ------------ 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
R+A +P P S G G ++ KKIFVG LP T + + YF
Sbjct: 93 -------QVLKRHA---SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYF 139
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--L 176
+FG I DV V RGFGF+TF E D V ++ HE+ G+ V + A P L
Sbjct: 140 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKEL 199
Query: 177 DDAGPSQNFMMNAAETFG 194
P+++ ++ +G
Sbjct: 200 SSTTPNRSPLIGYGNNYG 217
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEV 151
ES+ +GK +F+G + + E L+ YF ++G +++ + + TG RGFGF+ FA+
Sbjct: 6 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 64
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 204
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 65 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 120
Query: 205 RMYGSL 210
G L
Sbjct: 121 IFVGGL 126
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 97 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVA 153
+Q KIFVG L E T E L++YF +GR+LD + K TGH RGFGFVTF +E A
Sbjct: 45 NQNNNSKIFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESA 104
Query: 154 DRVSRRSHEICGQQVAIDSATP 175
DR + + HE+ G+QV A P
Sbjct: 105 DRAATKRHELDGRQVEAKKAVP 126
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 45/177 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+TF +S + HEL G V +A PK +
Sbjct: 83 RDKHTGHPRGFGFVTFEKEESADRAATKRHELDGRQVEAKKAVPKAE------------- 129
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
YI+ + + PT +KIFVG LP T ED YF
Sbjct: 130 -----YITRSQ----VTKPT-------------------RKIFVGGLPLSCTEEDFMEYF 161
Query: 123 SRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
R G +++ ++ +TG RGFGFVTF+ E + ++V +S HEI G+ V + A P
Sbjct: 162 ERLGHVVEAHIMYDHQTGISRGFGFVTFSSEDMVEKVFEQSQHEIKGKIVEVKKAEP 218
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D + RG GF+TF+S D VE + + HE+ G V V +A PK F RM G
Sbjct: 175 DHQTGISRGFGFVTFSSEDMVEKVFEQSQHEIKGKIVEVKKAEPKH--FSEGRRMKDLGG 232
Query: 63 GAYNAY 68
+Y Y
Sbjct: 233 NSYERY 238
>gi|226494259|ref|NP_001146396.1| uncharacterized protein LOC100279976 [Zea mays]
gi|219887017|gb|ACL53883.1| unknown [Zea mays]
gi|223975747|gb|ACN32061.1| unknown [Zea mays]
Length = 470
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 108/255 (42%), Gaps = 66/255 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFVVFADSGIAERVTLDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+ +++G+P G G + +KIFVG L T + RRYF
Sbjct: 87 ------SIASKNNSSIGSP----------GPGRT-----RKIFVGGLASNVTEVEFRRYF 125
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 126 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 185
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP QN+ M+ F GGYG MR GR YG L F
Sbjct: 186 SPGPIARSPAGGQNYAMSRVHNFLNGFNQGYNPNPLGGYG--MRVDGR-YGLLTGARNGF 242
Query: 213 DDWGYGMGSGRPSRG 227
+G G G G + G
Sbjct: 243 SSFGPGYGMGMNAEG 257
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLRAYFGRFGEVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTLD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|18416794|ref|NP_567753.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930503|gb|AAL31937.1|AF419605_1 AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|20453245|gb|AAM19861.1| AT4g26650/T15N24_100 [Arabidopsis thaliana]
gi|332659832|gb|AEE85232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 455
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E +++D H + G TV +A P++D
Sbjct: 48 RDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ------------ 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
R+A +P P S G G ++ KKIFVG LP T + + YF
Sbjct: 96 -------QVLKRHA---SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYF 142
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--L 176
+FG I DV V RGFGF+TF E D V ++ HE+ G+ V + A P L
Sbjct: 143 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKEL 202
Query: 177 DDAGPSQNFMMNAAETFG 194
P+++ ++ +G
Sbjct: 203 SSTTPNRSPLIGYGNNYG 220
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEV 151
ES+ +GK +F+G + + E L+ YF ++G +++ + + TG RGFGF+ FA+
Sbjct: 9 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 67
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 204
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 68 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 123
Query: 205 RMYGSL 210
G L
Sbjct: 124 IFVGGL 129
>gi|147783406|emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 45/236 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E +++D H + G TV +A P++D
Sbjct: 39 RDRTTGRARGFGFVVFADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQH----------- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L + GS +G + KKIFVG L T D ++YF
Sbjct: 88 -------------------LLNRNTGSIHGSPGPGRT--KKIFVGGLASTVTESDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E +RV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKEH 186
Query: 179 A-GPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRP 233
+ GPS++ ++ G + YG+ Y +G M D R+ P
Sbjct: 187 SPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRM--------DGRFNP 234
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + L+ YF +G +++ + + TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHLLNRNTGSIHGSPGPGRTKKIFVGGL 113
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 138 RDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 184
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT ++ + +F
Sbjct: 185 -----------------------------------QEKTSKIFVGGVSQEATEQEFKEFF 209
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + R ICG+ + + A P
Sbjct: 210 TQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLAICGKPIEVKKAQP 265
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 166 EHYLDGKIIDPKRAIPRDE 184
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 138 RDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 184
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT ++ + +F
Sbjct: 185 -----------------------------------QEKTSKIFVGGVSQEATEQEFKEFF 209
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + R ICG+ + + A P
Sbjct: 210 TQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLAICGKPIEVKKAQP 265
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 166 EHYLDGKIIDPKRAIPRDE 184
>gi|222423819|dbj|BAH19875.1| AT4G26650 [Arabidopsis thaliana]
Length = 452
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 31/198 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E +++D H + G TV +A P++D
Sbjct: 45 RDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQ------------ 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
R+A +P P S G G ++ KKIFVG LP T + + YF
Sbjct: 93 -------QVLKRHA---SPMHLISP-SHGGNGGGART--KKIFVGGLPSSITEAEFKNYF 139
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP--L 176
+FG I DV V RGFGF+TF E D V ++ HE+ G+ + + A P L
Sbjct: 140 DQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMIEVKRAVPKEL 199
Query: 177 DDAGPSQNFMMNAAETFG 194
P+++ ++ +G
Sbjct: 200 SSTTPNRSPLIGYGNNYG 217
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEV 151
ES+ +GK +F+G + + E L+ YF ++G +++ + + TG RGFGF+ FA+
Sbjct: 6 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 64
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 204
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 65 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 120
Query: 205 RMYGSL 210
G L
Sbjct: 121 IFVGGL 126
>gi|297724061|ref|NP_001174394.1| Os05g0376175 [Oryza sativa Japonica Group]
gi|255676319|dbj|BAH93122.1| Os05g0376175 [Oryza sativa Japonica Group]
Length = 134
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 71/164 (43%), Gaps = 48/164 (29%)
Query: 15 FITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYISAATR 74
ITF +S + ++ D H LG T+ V ATPKE+ R G I ATR
Sbjct: 8 LITFI--NSSQKVVKDEHILGNRTLEVKIATPKEE-MRAPG-------------IKKATR 51
Query: 75 YAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP 134
IFV R+PQ RR+F FG I+D+Y+P
Sbjct: 52 -----------------------------IFVARIPQSVDESKFRRHFEAFGEIIDLYMP 82
Query: 135 KRT---GHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
K HRG GF+TF D + + +HE+ G VA+D ATP
Sbjct: 83 KELRSKSHRGIGFITFRSAECVDNIMQETHELDGTTVAVDRATP 126
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 41/48 (85%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKE 48
MPK+ SK+HRGIGFITF SA+ V+N+M +THEL G+TV VDRATPK+
Sbjct: 81 MPKELRSKSHRGIGFITFRSAECVDNIMQETHELDGTTVAVDRATPKK 128
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 89/206 (43%), Gaps = 47/206 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDD------FRPVGR 56
+D+ + RG GFI FA E +++D H + G TV +A P++D P+
Sbjct: 41 RDRTTGRARGFGFIVFADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHL 100
Query: 57 M--SHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEAT 114
+ SHGG G GA T KKIFVG LP T
Sbjct: 101 ISPSHGGNGG--------------GART-------------------KKIFVGGLPSSIT 127
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAI 170
+ + YF +FG I DV V RGFGF+TF E D V ++ HE+ G+ V +
Sbjct: 128 EAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEV 187
Query: 171 DSATP--LDDAGPSQNFMMNAAETFG 194
A P L P+++ ++ +G
Sbjct: 188 KRAVPKELSSTTPNRSPLIGYGNNYG 213
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEV 151
ES+ +GK +F+G + + E L+ YF ++G +++ + + TG RGFGF+ FA+
Sbjct: 2 ESASDLGK-LFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPS 60
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDD-------AGPSQNFMMNAAETFGGYGGPMRTYG 204
VA+RV H I G+ V A P DD A P M + + GG GG RT
Sbjct: 61 VAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASP----MHLISPSHGGNGGGARTKK 116
Query: 205 RMYGSL 210
G L
Sbjct: 117 IFVGGL 122
>gi|389583621|dbj|GAB66355.1| nucleic acid binding factor [Plasmodium cynomolgi strain B]
Length = 667
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 68/114 (59%), Gaps = 12/114 (10%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSR- 158
+IFV RLP EA +DL +YFS++G+I+D+YV K ++GFGFV+F ++ D+V +
Sbjct: 279 RIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD 338
Query: 159 RSHEICGQQVAIDSATPLDDAG------PSQNFMMNAAETFGGYGGPMRTYGRM 206
+ H ICG+++ +D A+ D+ PS +++ A + P +T+ +
Sbjct: 339 KLHIICGKEIVVDVASMRDNKTKHLFHLPSDHYL--AKYSKNDKKSPSKTHNNL 390
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 75 YAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP 134
Y + G P + PG G+ + G K+FV +L T E LR YF FG I+D+Y+P
Sbjct: 555 YRSPGQPFVRKLPG-----GDEWNKRGYKLFVTKLNSVTTIETLRNYFEAFGEIIDIYMP 609
Query: 135 KRTGH---RGFGFVTFAEEVVADRV---SRRSHEICGQQVAIDSATP 175
RG FVTF + ++ H I G++V +D A P
Sbjct: 610 NDVCTNRPRGIAFVTFLDNDCVKKILSNKNSKHIIDGKEVVVDLADP 656
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 37/190 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E ++++ H + G TV +A P++D
Sbjct: 39 RDRATGRARGFGFVVFADLTVAERVIMEKHVIDGRTVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+I + + G+P G G + KKIFVG L T + ++YF
Sbjct: 87 -----HILSRSISNIHGSP----------GPGRT-----KKIFVGGLASTVTENEFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
++G I+DV V RGFGF+T+ E DRV ++ HE+ G+ V + A P +
Sbjct: 127 EQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQNFMM 187
GPS++ +M
Sbjct: 187 SPGPSRSPLM 196
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS++G +++ + + TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHVIDGRTVEAKKAVPRDD----QHILSRSISNIHGSPGPGRTKKIFVGGL 113
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA A E ++++ H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFADAAVAERVIMEKHNIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ +T + G+P G G + +KIFVG L T D R+YF
Sbjct: 87 ----NILNRSTGSSIHGSP----------GPGRT-----RKIFVGGLASTVTETDFRKYF 127
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
++G I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P +
Sbjct: 128 EQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPKEL 187
Query: 178 DAGPSQ 183
GPS+
Sbjct: 188 SPGPSR 193
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF FG +++ + K TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMM-NAAETFGGYGGPMRT 202
H I G+ V A P DD QN + + + G GP RT
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNILNRSTGSSIHGSPGPGRT 106
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 143 RDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 189
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT +D +++F
Sbjct: 190 -----------------------------------QEKTSKIFVGGVSQEATEQDFKQFF 214
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 215 MQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKTIEVKKAQP 270
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 170
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 171 EHYLDGKIIDPKRAIPRDE 189
>gi|9758790|dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 404
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 37/196 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA + E +++ H + G V +A P++D H +
Sbjct: 39 KDRATGRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDD---------HVVF 89
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N+ + G+P G S+ KKIFVG L T + ++YF
Sbjct: 90 NKSNSSLQ--------GSP------------GPSNS---KKIFVGGLASSVTEAEFKKYF 126
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
++FG I DV V RT RGFGF+++ E D+V +++ HE+ G+ V + A P D
Sbjct: 127 AQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDM 186
Query: 179 AGPSQNFMMNAAETFG 194
A + MN +FG
Sbjct: 187 ALNTMRNQMN-VNSFG 201
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + LR YF FG +L+ + K TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>gi|297737532|emb|CBI26733.3| unnamed protein product [Vitis vinifera]
Length = 309
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA E +++D H + G TV +A P++D
Sbjct: 39 RDRTTGRARGFGFVVFADPAVAERVVMDKHMIDGRTVEAKKAVPRDDQH----------- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L + GS +G + KKIFVG L T D ++YF
Sbjct: 88 -------------------LLNRNTGSIHGSPGPGRT--KKIFVGGLASTVTESDFKKYF 126
Query: 123 SRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E +RV ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKRAVPKEH 186
Query: 179 A-GPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGM 219
+ GPS++ ++ G + YG+ Y +G M
Sbjct: 187 SPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRM 228
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + L+ YF +G +++ + + TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVVMD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + G GP RT G L
Sbjct: 67 KHMIDGRTVEAKKAVPRDD----QHLLNRNTGSIHGSPGPGRTKKIFVGGL 113
>gi|21553963|gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 431
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 37/196 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA + E +++ H + G V +A P++D H +
Sbjct: 39 KDRATGRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDD---------HVVF 89
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N+ + G+P G S+ KKIFVG L T + ++YF
Sbjct: 90 NKSNSSLQ--------GSP------------GPSNS---KKIFVGGLASSVTEAEFKKYF 126
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
++FG I DV V RT RGFGF+++ E D+V +++ HE+ G+ V + A P D
Sbjct: 127 AQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDM 186
Query: 179 AGPSQNFMMNAAETFG 194
A + MN +FG
Sbjct: 187 ALNTMRNQMN-VNSFG 201
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + LR YF FG +L+ + K TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT +D +++F
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQEATEQDFKQFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 104 MQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKTIEVKKAQP 159
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 70/179 (39%), Gaps = 51/179 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+++ R
Sbjct: 32 RDGATGRSRGFGFLTFKDPKVVNTVMVKEHTLDGKLIDPKRAIPRDEQERTA-------- 83
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEA+ +D +F
Sbjct: 84 ----------------------------------------KIFVGGVSQEASQDDFANFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
RFG +LD + + K TG RGFGFVTF E DR ICG+ + + A P D
Sbjct: 104 RRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLESPLAICGKNIEVKRAQPRGD 162
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T E L+ YFS+FG +++ V + TG RGFGF+TF + V + V +
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HTLDGKLIDPKRAIPRDE 78
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 84/188 (44%), Gaps = 42/188 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA + E +++ H + G V +A P+ DD + +
Sbjct: 39 KDRSTGRARGFGFLVFADPNVAERVVLLRHVIDGKLVEAKKAVPR-DDHKSNSSLQGSSP 97
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G N+ KKIFVG L T + ++YF
Sbjct: 98 GPANS----------------------------------KKIFVGGLASSVTEAEFKKYF 123
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
++FG I DV V +RT RGFGF+++ E DRV RR+ HE+ G+ V + A P D
Sbjct: 124 AQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAVPKD- 182
Query: 179 AGPSQNFM 186
P +N M
Sbjct: 183 --PVRNQM 188
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T + LR YF FG +L+ + K TG RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERVVLL 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 RHVIDGKLVEAKKAVPRDD 85
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPV-GRMSHGG 61
DQ ++ RG GFI++ S D+V+ ++ T HEL G V V A PK+ PV +M+ G
Sbjct: 137 DQRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAVPKD----PVRNQMNVNG 192
Query: 62 YGA 64
+G+
Sbjct: 193 FGS 195
>gi|18422817|ref|NP_568685.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30695248|ref|NP_851149.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17528972|gb|AAL38696.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23297042|gb|AAN13229.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332008155|gb|AED95538.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008156|gb|AED95539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 431
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 37/196 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA + E +++ H + G V +A P++D H +
Sbjct: 39 KDRATGRARGFGFVVFADPNVAERVVLLKHIIDGKIVEAKKAVPRDD---------HVVF 89
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N+ + G+P G S+ KKIFVG L T + ++YF
Sbjct: 90 NKSNSSLQ--------GSP------------GPSNS---KKIFVGGLASSVTEAEFKKYF 126
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
++FG I DV V RT RGFGF+++ E D+V +++ HE+ G+ V + A P D
Sbjct: 127 AQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDM 186
Query: 179 AGPSQNFMMNAAETFG 194
A + MN +FG
Sbjct: 187 ALNTMRNQMN-VNSFG 201
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + LR YF FG +L+ + K TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>gi|449443534|ref|XP_004139532.1| PREDICTED: uncharacterized protein LOC101217028 [Cucumis sativus]
gi|449505564|ref|XP_004162509.1| PREDICTED: uncharacterized LOC101217028 [Cucumis sativus]
Length = 477
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 45/236 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + ++++ H + G TV +A P++D
Sbjct: 37 RDRATGRARGFGFVVFADPVAAARVVLEKHVIDGRTVEAKKAVPRDDQ------------ 84
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + LG+P G + KKIFVG L T D ++YF
Sbjct: 85 -----NILSRNNTGILGSP------------GPTRT---KKIFVGGLASTVTESDFKKYF 124
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
+FG I+DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 125 DQFGTIVDVVVMYDHNTQRPRGFGFITYESEESVEKVLYKTFHELNGKMVEVKRAVPKES 184
Query: 179 AG-PSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRGDWRYRP 233
+ P++N + FG G + Y + Y GYG+ R D R+ P
Sbjct: 185 SPVPNRNQLAGYPFNFGRVGSYLNGYNQGYNPTAVG--GYGL------RSDGRFSP 232
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR YF FG +++V + + TG RGFGFV FA+ V A RV
Sbjct: 5 KLFIGGISWDTDEDRLREYFRNFGEVVEVMIMRDRATGRARGFGFVVFADPVAAARVVLE 64
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + G GP RT G L
Sbjct: 65 KHVIDGRTVEAKKAVPRDD----QNILSRNNTGILGSPGPTRTKKIFVGGL 111
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 85/189 (44%), Gaps = 37/189 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E +++ H + G V +A P+ DD + R S
Sbjct: 38 KDRATGRARGFGFLVFADPTVAERVVLIRHVIDGKIVEAKKAVPR-DDHVVLNRSSS--- 93
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+L PG KKIFVG L T + ++YF
Sbjct: 94 -------------------SLQGSPGP---------ATSKKIFVGGLASSVTEAEFKKYF 125
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
++FG I DV V RT RGFGF++F E DRV +R+ HE+ G+ V + A P +
Sbjct: 126 AQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDRVLQRTFHELNGKMVEVKLAVPKEM 185
Query: 179 A-GPSQNFM 186
A P +N M
Sbjct: 186 ALNPIRNQM 194
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T + LR YF FG +L+ + K TG RGFGF+ FA+ VA+RV
Sbjct: 6 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAERVVLI 65
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 66 RHVIDGKIVEAKKAVPRDD 84
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 91/230 (39%), Gaps = 56/230 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GFITF SV+ ++ HEL G + A PK + V +
Sbjct: 74 RDPATKRARGFGFITFVDPSSVDKVLNAREHELDGKKIDPKVAFPKRTQAKLVTKT---- 129
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KK+F+G L +T EDL++Y
Sbjct: 130 ----------------------------------------KKVFIGGLSATSTLEDLKQY 149
Query: 122 FSRFGRILD---VYVPKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +G++ D +Y HRGFGFVTF + VAD+V HEI G+ V A P +
Sbjct: 150 FETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 209
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRT-------YGRMYGSLDFDDWGYGMG 220
P Q AA YG P T R G+L + +G G G
Sbjct: 210 VMLPVQLNKSRAAAARNLYGMPPETLLAYAQYLPRFGGNLMYPGFGNGFG 259
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + TAE+LR YF RFG + + V P RGFGF+TF + D+V +
Sbjct: 42 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNA 101
Query: 159 RSHEICGQQVAIDSATP 175
R HE+ G+++ A P
Sbjct: 102 REHELDGKKIDPKVAFP 118
>gi|347828861|emb|CCD44558.1| hypothetical protein [Botryotinia fuckeliana]
Length = 508
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF A +V +MV H L G V D T
Sbjct: 32 RDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIVRPDLKT----------------- 74
Query: 63 GAYNAYISAATRYAALGAPTLYDH------PGSFYGRGESSQRIGKKIFVGRLPQEATAE 116
N+ S +++ L + + H P R E Q KIFVG + Q+A+ +
Sbjct: 75 -FNNSLRSYPSKFLLLASKGTHSHTTFKIDPKRAIPRDE--QERTSKIFVGGVSQDASEQ 131
Query: 117 DLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSA 173
D + YF++FGR++D + + K TG RGFGFVTF E + EI G+ + + A
Sbjct: 132 DFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEAPLEIHGKPIEVKKA 191
Query: 174 TP 175
P
Sbjct: 192 QP 193
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSRR 159
+F+G L E T E L+ YFS+FG +L+ V R G RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDESLKDYFSQFGEVLECTV-MRDGASGRSRGFGFLTFKDARTVNIVMVK 59
Query: 160 SHEICGQQVAIDSAT 174
H + G+ V D T
Sbjct: 60 EHYLDGKIVRPDLKT 74
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 24/177 (13%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ F + S + + + H + G T+ V RA P+ D P+ R +
Sbjct: 102 RGFGFVQFQESTSADAALKEEHVIDGRTIDVKRAVPR--DRAPLPR-------------A 146
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
AA R +A G +G G + + KIFVG L QE D R YF++FG++ D
Sbjct: 147 AADRNSANARGG--SQVGGRHG-GMNDAPLTNKIFVGGLDQEVNDADFRGYFAKFGKVED 203
Query: 131 VYV--PKRTGH-RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
V K+TG RGFGF+T+ + ++V +S +HE+ G+ V + +A P D GP Q
Sbjct: 204 AVVMYDKKTGRSRGFGFITYDSPDIVRKVMSGGTHELKGKSVEVKTAAPRD--GPRQ 258
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+E+
Sbjct: 138 RDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIIDPKRAIPREE------------- 184
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT ED +F
Sbjct: 185 -----------------------------------QERTSKIFVGGVSQEATEEDFTNFF 209
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF + D R +I G+Q+ + A P
Sbjct: 210 KQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRAPLQILGKQIEVKRAQP 265
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 106 KMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 165
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P ++
Sbjct: 166 EHYLDGKIIDPKRAIPREE 184
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT ++ + +F
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQEATEQEFKGFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R ICG+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVENALSRPLAICGKPIEVKKAQP 159
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|326525423|dbj|BAJ88758.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 105/250 (42%), Gaps = 67/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA A E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFIVFAEAGVAERVTMDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I++ +++G+P G R KIFVG L T + RRYF
Sbjct: 87 -----SIASKNNGSSIGSP------------GPVRTR---KIFVGGLASNVTEVEFRRYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 127 EQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 186
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP QN ++ F GGYG MR GR +G L F
Sbjct: 187 SPGPVARSPAGGQNLAISRVHNFLNGFNQGYNPNPIGGYG--MRVDGR-FGLLSGARNGF 243
Query: 213 DDWG--YGMG 220
+G YGMG
Sbjct: 244 SSFGPSYGMG 253
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGF+ FAE VA+RV+
Sbjct: 7 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAERVTMD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + G GP+RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QSIASKNNGSSIGSPGPVRTRKIFVGGL 113
>gi|326494758|dbj|BAJ94498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 494
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 105/250 (42%), Gaps = 67/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA A E + +D H + G V +A P++D
Sbjct: 62 RDRNTGRARGFGFIVFAEAGVAERVTMDKHMIDGRMVEAKKAVPRDDQ------------ 109
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I++ +++G+P G R KIFVG L T + RRYF
Sbjct: 110 -----SIASKNNGSSIGSP------------GPVRTR---KIFVGGLASNVTEVEFRRYF 149
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 150 EQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 209
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP QN ++ F GGYG MR GR +G L F
Sbjct: 210 SPGPVARSPAGGQNLAISRVHNFLNGFNQGYNPNPIGGYG--MRVDGR-FGLLSGARNGF 266
Query: 213 DDWG--YGMG 220
+G YGMG
Sbjct: 267 SSFGPSYGMG 276
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGF+ FAE VA+RV+
Sbjct: 30 KLFVGGISWETDEDRLRDYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEAGVAERVTMD 89
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + G GP+RT G L
Sbjct: 90 KHMIDGRMVEAKKAVPRDD----QSIASKNNGSSIGSPGPVRTRKIFVGGL 136
>gi|154296333|ref|XP_001548598.1| hypothetical protein BC1G_12993 [Botryotinia fuckeliana B05.10]
Length = 627
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 82/182 (45%), Gaps = 29/182 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF A +V +MV H L G V D T
Sbjct: 152 RDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIVRPDLKT----------------- 194
Query: 63 GAYNAYISAATRYAALGAPTLYDH------PGSFYGRGESSQRIGKKIFVGRLPQEATAE 116
N+ S +++ L + + H P R E Q KIFVG + Q+A+ +
Sbjct: 195 -FNNSLRSYPSKFLLLASEGTHSHTTFKIDPKRAIPRDE--QERTSKIFVGGVSQDASEQ 251
Query: 117 DLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSA 173
D + YF++FGR++D + + K TG RGFGFVTF E + EI G+ + + A
Sbjct: 252 DFKEYFTQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEAPLEIHGKPIEVKKA 311
Query: 174 TP 175
P
Sbjct: 312 QP 313
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSR 158
K+F+G L E T E L+ YFS+FG +L+ V R G RGFGF+TF + + V
Sbjct: 120 KMFIGGLNWETTDESLKDYFSQFGEVLECTV-MRDGASGRSRGFGFLTFKDARTVNIVMV 178
Query: 159 RSHEICGQQVAIDSAT 174
+ H + G+ V D T
Sbjct: 179 KEHYLDGKIVRPDLKT 194
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 44/203 (21%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E ++++ H + G V +A P++D
Sbjct: 39 RDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L GS +G S+ KKIFVG L T D R YF
Sbjct: 87 ------------------QALSKSGGSAHGSPGPSRT--KKIFVGGLASTVTEADFRTYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 127 EQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQ-------NFMMNAAETF 193
GPS N++MN A +F
Sbjct: 187 SPGPSMRSPAGGINYVMNRANSF 209
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR YF ++G +++ + + TG RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q + + + G GP RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QQALSKSGGSAHGSPGPSRTKKIFVGGL 113
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 59 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 105
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT +D +++F
Sbjct: 106 -----------------------------------QEKTSKIFVGGVSQEATEQDFKQFF 130
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 131 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEILGKSIEVKKAQP 186
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 87 EHYLDGKIIDPKRAIPRDE 105
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ MS
Sbjct: 124 KDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREE-------MSS--- 173
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + +KIFVG +P T + L+ +F
Sbjct: 174 ---------------------KDGPKT------------RKIFVGGIPPSLTEDKLKEHF 200
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G++++ + + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 201 SSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKK 260
Query: 178 DAG 180
G
Sbjct: 261 PGG 263
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V +
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 151
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 152 EHTIDGRTVEVKRTVPREE 170
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ MS
Sbjct: 61 KDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREE-------MSS--- 110
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + +KIFVG +P T + L+ +F
Sbjct: 111 ---------------------KDGPKT------------RKIFVGGIPPSLTEDKLKEHF 137
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G++++ + + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 138 SSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKK 197
Query: 178 DAG 180
G
Sbjct: 198 PGG 200
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V +
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQD 88
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 89 EHTIDGRTVEVKRTVPREE 107
>gi|405957161|gb|EKC23392.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 457
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 96 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADR 155
+ Q + +K+FVGR ++ TAEDLR YF +FG ++DV++PK R F FVTFA+ V+
Sbjct: 198 AQQIMNRKVFVGRCTEDMTAEDLRNYFGKFGEVVDVFIPKP--FRAFAFVTFADPEVSQN 255
Query: 156 VSRRSHEICGQQVAIDSATPLD 177
+ H I G V I SA P +
Sbjct: 256 LCGEDHIIKGASVHISSAAPKN 277
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVAD 154
QR I +G LP ++T EDLR+YFS+FG +L V V P+ +GFGF+ FA+
Sbjct: 115 QRCSDLIVLG-LPWKSTEEDLRKYFSQFGELLMVQVKVDPRTRQSKGFGFIRFADYDSQF 173
Query: 155 RVSRRSHEICGQQVAI 170
+ + H I G+ +
Sbjct: 174 KCMSQRHMIDGRWCDV 189
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 36/179 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GF+ FA + +++D H + G TV +A P+ DD + + R
Sbjct: 39 KDRTTRRARGFGFVVFADPAIADRVVLDKHTIDGRTVEAKKAIPR-DDQQHMNR------ 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N+ I+ A SQ KKIFVG L T D R+YF
Sbjct: 92 ---NSNIAHA----------------------PPSQVRTKKIFVGGLAPTVTENDFRKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+FG I DV V RGFGF+T+ E D+V +++ H++ G+ V + A P +
Sbjct: 127 EQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLNGKMVEVKRAVPKE 185
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK-RTGHR--GFGFVTFAEEVVADRVSRR 159
K+F+G + E T + L+ YF RFG +++ + K RT R GFGFV FA+ +ADRV
Sbjct: 7 KLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIADRVVLD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHTIDGRTVEAKKAIPRDD 85
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D ++ RG GFIT+ S D+V+ ++ T H+L G V V RA PKE P R GG+
Sbjct: 140 DHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLNGKMVEVKRAVPKELSPSPA-RTPIGGF 198
Query: 63 GA 64
G
Sbjct: 199 GV 200
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT +D +++F
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQEATEQDFKQFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF + ++ R EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSRPLEILGKPIEVKKAQP 159
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T E LR YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|357447959|ref|XP_003594255.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483303|gb|AES64506.1| RNA-binding protein, putative [Medicago truncatula]
Length = 446
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 34/179 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++++ H + G TV +A P++D
Sbjct: 2 KDRTTGRARGFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDDQ------------ 49
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N + + + APT KKIFVG L T D + YF
Sbjct: 50 ---NVFTRSNSSSHGSPAPTPIRT---------------KKIFVGGLASTVTESDFKNYF 91
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
+FG I DV V RGFGF+T+ +EE V + + HE+ G+ V + A P D
Sbjct: 92 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKD 150
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 140 RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
RGFGFV FA+ VA+RV H I G+ V A P DD
Sbjct: 10 RGFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDD 48
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F+ E ++ + H + G V +A P+ DD + R S G
Sbjct: 39 KDRTTGRARGFGFVVFSDPSIAERVIKEKHSIDGRMVEAKKAVPR-DDQNMLSRNSGG-- 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+++ PG GR KKIFVG L T D R+YF
Sbjct: 96 -------------------SIHGSPGP--GRT-------KKIFVGGLASTVTESDFRKYF 127
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P +
Sbjct: 128 DQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKTFHELNGKMVEVKRAVPKEL 187
Query: 178 DAGPSQ 183
GPS+
Sbjct: 188 SPGPSR 193
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YF FG +++ + K TG RGFGFV F++ +A+RV +
Sbjct: 7 KLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAERVIKE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMM-NAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + N+ + G GP RT G L
Sbjct: 67 KHSIDGRMVEAKKAVPRDD----QNMLSRNSGGSIHGSPGPGRTKKIFVGGL 114
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 145 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 191
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT +D +++F
Sbjct: 192 -----------------------------------QEKTSKIFVGGVSQEATEQDFKQFF 216
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 217 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEILGKSIEVKKAQP 272
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 172
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 173 EHYLDGKIIDPKRAIPRDE 191
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF A +V +MV H L G + RA P+++ R
Sbjct: 32 RDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIIDPKRAIPRDEQERT--------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT +D + YF
Sbjct: 83 ---------------------------------------SKIFVGGVSQEATEQDFKEYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACLDSPLEILGKPIEVKKAQP 159
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSRR 159
+F+G L E T + L+ YFS+FG +L+ V R G RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTV-MRDGASGRSRGFGFLTFKDARTVNIVMVK 59
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 82/205 (40%), Gaps = 49/205 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GFITF SV+ ++ HEL G + A PK + V +
Sbjct: 75 RDPATKRARGFGFITFVEPSSVDKVLNARDHELDGKKIDPKVAFPKRTQAKLVTKT---- 130
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KK+F+G L +T ED+++Y
Sbjct: 131 ----------------------------------------KKVFIGGLSATSTLEDMKQY 150
Query: 122 FSRFGRILD---VYVPKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +G++ D +Y HRGFGFVTF + VAD+V HEI G+ V A P +
Sbjct: 151 FESYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 210
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRT 202
P Q AA YG P T
Sbjct: 211 VMLPVQLNKSRAAAARNLYGMPPET 235
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + TAE+LR YF RFG + + V P RGFGF+TF E D+V +
Sbjct: 43 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVEPSSVDKVLNA 102
Query: 159 RSHEICGQQVAIDSATP 175
R HE+ G+++ A P
Sbjct: 103 RDHELDGKKIDPKVAFP 119
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+
Sbjct: 95 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREE------------- 141
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ P +KIFVG LP T +DLR +F
Sbjct: 142 ------------MSSKDGPKT------------------RKIFVGGLPSTLTEDDLRDHF 171
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G +++ + V TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 172 SSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 231
Query: 178 DAG 180
G
Sbjct: 232 HGG 234
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 123 EHNIDGRTVEVKRTVPREE 141
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+
Sbjct: 95 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREE------------- 141
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ P +KIFVG LP T +DLR +F
Sbjct: 142 ------------MSSKDGPKT------------------RKIFVGGLPSTLTEDDLRDHF 171
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G +++ + V TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 172 SSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 231
Query: 178 DAG 180
G
Sbjct: 232 HGG 234
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 122
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 123 EHNIDGRTVEVKRTVPREE 141
>gi|297606021|ref|NP_001057893.2| Os06g0566100 [Oryza sativa Japonica Group]
gi|53793272|dbj|BAD54495.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|53793315|dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|215765227|dbj|BAG86924.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677149|dbj|BAF19807.2| Os06g0566100 [Oryza sativa Japonica Group]
Length = 285
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ MS
Sbjct: 2 KDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTIDGRTVEVKRTVPREE-------MSS--- 51
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + +KIFVG +P T + L+ +F
Sbjct: 52 ---------------------KDGPKT------------RKIFVGGIPPSLTEDKLKEHF 78
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G++++ + + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 79 SSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAGKQVEIKKAEPKK 138
Query: 178 DAG 180
G
Sbjct: 139 PGG 141
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 44/203 (21%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E ++++ H + G V +A P++D
Sbjct: 39 RDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L GS +G S+ KKIFVG L D R YF
Sbjct: 87 ------------------QALSKSGGSTHGSPGPSRT--KKIFVGGLASTVNEADFRTYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 127 EQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKALFKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQ-------NFMMNAAETF 193
GPS N++MN A +F
Sbjct: 187 SPGPSMRSPAGGINYVMNRANSF 209
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR YF ++G +++ + + TG RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q + + + G GP RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QQALSKSGGSTHGSPGPSRTKKIFVGGL 113
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+
Sbjct: 98 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREE------------- 144
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ P +KIFVG LP + +DLR +F
Sbjct: 145 ------------MSSKDGPKT------------------RKIFVGGLPASLSEDDLRDHF 174
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATPLD 177
S +G++++ + V TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 175 SSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 234
Query: 178 DAG 180
G
Sbjct: 235 HGG 237
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 66 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 125
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 126 EHNIDGRTVEVKRTVPREE 144
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKED--DFRPVGRMSH 59
D + RG GF+TF S DSVE ++ + +LGG V + +A PK+ D GR SH
Sbjct: 188 DHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHSSNGRSSH 247
Query: 60 GGYG 63
G G
Sbjct: 248 AGGG 251
>gi|425766220|gb|EKV04844.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
PHI26]
gi|425779142|gb|EKV17231.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
Pd1]
Length = 447
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 30 RDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 76
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT +D +++F
Sbjct: 77 -----------------------------------QEKTSKIFVGGVSQEATEQDFKQFF 101
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF + ++ R EI G+ + + A P
Sbjct: 102 MQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSRPLEILGKPIEVKKAQP 157
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 116 EDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 172
E LR YFS+FG + + V + + RGFGF+TF + + V + H + G+ +
Sbjct: 11 ESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKEHYLDGKIIDPKR 70
Query: 173 ATPLDD 178
A P D+
Sbjct: 71 AIPRDE 76
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+
Sbjct: 78 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNIDGRTVEVKRTVPREE------------- 124
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ P +KIFVG LP + +DLR +F
Sbjct: 125 ------------MSSKDGPKT------------------RKIFVGGLPASLSEDDLRDHF 154
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G++++ + V TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 155 SSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 214
Query: 178 DAG 180
G
Sbjct: 215 HGG 217
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 105
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 106 EHNIDGRTVEVKRTVPREE 124
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKED--DFRPVGRMSH 59
D + RG GF+TF S DSVE ++ + +LGG V + +A PK+ D GR SH
Sbjct: 168 DHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHSSNGRSSH 227
Query: 60 GGYG 63
G G
Sbjct: 228 AGGG 231
>gi|414590674|tpg|DAA41245.1| TPA: hypothetical protein ZEAMMB73_495774 [Zea mays]
Length = 470
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 109/257 (42%), Gaps = 64/257 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + E + ++ H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFVVFADSGIAERVTMEKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+ +++G+P G G + +KIFVG L T + RRYF
Sbjct: 87 ------SIASKNNSSIGSP----------GPGRT-----RKIFVGGLASNVTEVEFRRYF 125
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 126 EQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 185
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRT---YGRMYGSLD-FD 213
+ GP QN+ M+ F GGYG MR YG + G+ + F
Sbjct: 186 SPGPIARSPAGGQNYAMSRVHNFLNGFNQGYNPNPLGGYG--MRVDARYGLLAGARNGFS 243
Query: 214 DWGYGMGSGRPSRGDWR 230
+G G G G G R
Sbjct: 244 SFGPGYGMGMSVEGGMR 260
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR YF RFG + + + + TG RGFGFV FA+ +A+RV+
Sbjct: 7 KLFVGGISWETDEDRLREYFGRFGDVTEAVIMRDRNTGRARGFGFVVFADSGIAERVTME 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHMIDGRMVEAKKAVPRDD 85
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GF+TF+ ++ ++ D H + G TV V R PKE+
Sbjct: 132 KDKHTRMPRGFGFVTFSDPSVLDRVLEDAHVIDGRTVEVKRTVPKEE------------- 178
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ D P + KKIFVG +P T + L+ +F
Sbjct: 179 ------------------MSSKDGPKT------------KKIFVGGIPSSLTEDKLKEHF 208
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATP 175
S +G++++ + + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 209 SSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEP 266
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHR---GFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K R GFGFVTF++ V DRV
Sbjct: 100 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 159
Query: 160 SHEICGQQVAIDSATPLDD 178
+H I G+ V + P ++
Sbjct: 160 AHVIDGRTVEVKRTVPKEE 178
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE---DDFRPVGRMS 58
D + RG GF+TF S D+VE +M + H+LGG V + +A PK+ D GR S
Sbjct: 222 DHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGGGDSSSNGRHS 281
Query: 59 HGG 61
GG
Sbjct: 282 RGG 284
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 82/205 (40%), Gaps = 49/205 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GFITF SV+ ++ HEL G + A PK + V +
Sbjct: 67 RDPATKRARGFGFITFVDPSSVDKVLHARDHELDGKKIDPKVAFPKRTQAKLVTKT---- 122
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KK+F+G L +T ED+++Y
Sbjct: 123 ----------------------------------------KKVFIGGLSATSTLEDMKQY 142
Query: 122 FSRFGRILD---VYVPKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +G++ D +Y HRGFGFVTF + VAD+V HEI G+ V A P +
Sbjct: 143 FETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 202
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRT 202
P Q AA YG P T
Sbjct: 203 VMLPVQLNKSRAAAARNLYGMPPET 227
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR- 158
K+F+G L + TAE+LR YF RFG + + V P RGFGF+TF + D+V
Sbjct: 35 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLHA 94
Query: 159 RSHEICGQQVAIDSATP 175
R HE+ G+++ A P
Sbjct: 95 RDHELDGKKIDPKVAFP 111
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA D + +F
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQEANEHDFKEFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + EICG+ + + A P
Sbjct: 104 AQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|357447957|ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483302|gb|AES64505.1| RNA-binding protein, putative [Medicago truncatula]
Length = 522
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 34/179 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++++ H + G TV +A P++D
Sbjct: 78 KDRTTGRARGFGFVVFADPSVAERVVMEKHVIDGRTVEAKKAVPRDDQ------------ 125
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N + + + APT KKIFVG L T D + YF
Sbjct: 126 ---NVFTRSNSSSHGSPAPTPIRT---------------KKIFVGGLASTVTESDFKNYF 167
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
+FG I DV V RGFGF+T+ +EE V + + HE+ G+ V + A P D
Sbjct: 168 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKD 226
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR+YF FG +++ + K TG RGFGFV FA+ VA+RV
Sbjct: 46 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 105
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 106 KHVIDGRTVEAKKAVPRDD 124
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA D + +F
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQEANEHDFKEFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + EICG+ + + A P
Sbjct: 104 AQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 53/187 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A ++ ++ D H L G TV + R P+ + +
Sbjct: 75 KDRLTGQPRGFGFVTYADPSVIDKVIQDKHILDGKTVEIKRTIPRGNSSK---------- 124
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
AP KK+FVG +P T ++ + YF
Sbjct: 125 -----------------APKT------------------KKVFVGGIPTSITEDEFKDYF 149
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTF-AEEVVADRVSR-RSHEICGQQVAIDSA---T 174
S+FG++++ + + TG RGFGF+TF E+ V + +S+ R E+ G+QV I A
Sbjct: 150 SKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKAEPKK 209
Query: 175 PLDDAGP 181
PL DAGP
Sbjct: 210 PLPDAGP 216
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L + T+ ++FS++G + D + K TG RGFGFVT+A+ V D+V +
Sbjct: 43 KIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQD 102
Query: 160 SHEICGQQVAIDSATP 175
H + G+ V I P
Sbjct: 103 KHILDGKTVEIKRTIP 118
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+E+ R
Sbjct: 140 RDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIIDPKRAIPREEQERT--------- 190
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT ED +F
Sbjct: 191 ---------------------------------------SKIFVGGVSQEATEEDFTNFF 211
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF + D R +I G+Q+ + A P
Sbjct: 212 KQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRGPLQILGKQIEVKRAQP 267
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 167
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P ++
Sbjct: 168 EHYLDGKIIDPKRAIPREE 186
>gi|357122209|ref|XP_003562808.1| PREDICTED: uncharacterized protein LOC100836006 [Brachypodium
distachyon]
Length = 472
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 105/250 (42%), Gaps = 67/250 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E + +D H + G V +A P++D
Sbjct: 39 RDRNTGRARGFGFIVFAEPGVAERVTMDKHMIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I++ +++G+P G R KIFVG L T + RRYF
Sbjct: 87 -----SIASKNNGSSIGSP------------GPVRTR---KIFVGGLASNVTEVEFRRYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 127 EQFGMITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQ 186
Query: 179 A-GP-------SQNFMMNAAETF-------------GGYGGPMRTYGRMYGSLD-----F 212
+ GP QN+ ++ F GGYG MR GR +G L F
Sbjct: 187 SPGPVARSPAGGQNYAISRVHNFLNGFNQGYNPNPIGGYG--MRVDGR-FGLLSGARNGF 243
Query: 213 DDW--GYGMG 220
+ GYGMG
Sbjct: 244 SSFGPGYGMG 253
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E E LR YF RFG + + + + TG RGFGF+ FAE VA+RV+
Sbjct: 7 KLFVGGISWETDEERLREYFGRFGEVTEAVIMRDRNTGRARGFGFIVFAEPGVAERVTMD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + G GP+RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QSIASKNNGSSIGSPGPVRTRKIFVGGL 113
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 83/200 (41%), Gaps = 49/200 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMV-DTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GFITFA SVE ++ D HEL G + A PK + + +
Sbjct: 77 RDPATKRARGFGFITFADPASVEKVLAHDQHELDGKKIDPKVAFPKRAQPKMIIKT---- 132
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KK+F+G L +T ED+R Y
Sbjct: 133 ----------------------------------------KKVFIGGLSATSTLEDMRNY 152
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F ++G++ D + K T HRGFGF+TF + V+D+V HEI G+ V A P +
Sbjct: 153 FEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKE 212
Query: 178 DAGPSQNFMMNAAETFGGYG 197
P Q AA YG
Sbjct: 213 VMLPVQLNKSRAAAARNLYG 232
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + TAE LR YF +FG + + V P RGFGF+TFA+ ++V +
Sbjct: 45 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKVLAH 104
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETF-GGYGGP-----MRTYGRMYGSLD 211
HE+ G+++ A P A P ++ + F GG MR Y YG ++
Sbjct: 105 DQHELDGKKIDPKVAFP-KRAQP--KMIIKTKKVFIGGLSATSTLEDMRNYFEQYGKVE 160
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D+ ++ HRG GFITF + D + + + HE+ G V +A PKE PV
Sbjct: 167 DKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKE-VMLPVQLNKSRAA 225
Query: 63 GAYN----------AYISAATRYAALGAPTLYDHPGSFY 91
A N AY S R GA LY PG F+
Sbjct: 226 AARNLYGLGPEQLLAYASYLPRLGTYGANMLY--PGGFF 262
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 141 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 187
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA D + +F
Sbjct: 188 -----------------------------------QEKTSKIFVGGVSQEANEHDFKEFF 212
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + EICG+ + + A P
Sbjct: 213 AQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVKKAQP 268
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 169 EHYLDGKIIDPKRAIPRDE 187
>gi|156055736|ref|XP_001593792.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980]
gi|154703004|gb|EDO02743.1| hypothetical protein SS1G_05220 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 521
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 81/182 (44%), Gaps = 29/182 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF A +V +MV H L G V D T
Sbjct: 50 RDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIVRPDLKT----------------- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDH------PGSFYGRGESSQRIGKKIFVGRLPQEATAE 116
N+ S +++ L + + H P R E Q KIFVG + Q+A+ +
Sbjct: 93 -FNNSLRSYPSKFHYLASKNISSHSNFKIDPKRAIPRDE--QERTSKIFVGGVSQDASEQ 149
Query: 117 DLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSA 173
D + YF +FGR++D + + K TG RGFGFVTF E + EI G+ + + A
Sbjct: 150 DFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLEIHGKPIEVKKA 209
Query: 174 TP 175
P
Sbjct: 210 QP 211
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSR 158
K+F+G L E T + L+ YFS+FG +L+ V R G RGFGF+TF + + V
Sbjct: 18 KMFIGGLNWETTDQSLKEYFSQFGEVLECTV-MRDGASGRSRGFGFLTFKDARTVNIVMV 76
Query: 159 RSHEICGQQVAIDSAT 174
+ H + G+ V D T
Sbjct: 77 KEHYLDGKIVRPDLKT 92
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 84/205 (40%), Gaps = 49/205 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GFITF SV+ ++ + HEL G + A PK + V +
Sbjct: 78 RDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKT---- 133
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KK+F+G L +T ED+++Y
Sbjct: 134 ----------------------------------------KKVFIGGLSATSTLEDMKQY 153
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +G++ D + K T HRGFGFVTF + VAD+V HEI G+ V A P +
Sbjct: 154 FETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 213
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRT 202
P Q AA YG P T
Sbjct: 214 VMLPVQLNKSRAAAARNLYGMPPET 238
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + TAE+LR YF RFG + + V P RGFGF+TF + D+V +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 159 RSHEICGQQVAIDSATP 175
R HE+ G+++ A P
Sbjct: 106 REHELDGKKIDPKVAFP 122
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GF+TF+ ++ ++ D H + G TV V R PKE+ MS
Sbjct: 133 KDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKEE-------MSS--- 182
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + KKIFVG +P T + L+ +F
Sbjct: 183 ---------------------KDGPKT------------KKIFVGGIPPSLTEDKLKEHF 209
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATP 175
S +G++++ + + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 210 SSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEP 267
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHR---GFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K R GFGFVTF++ V DRV
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 161 EHVIDGRTVEVKRTVPKEE 179
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE---DDFRPVGRMS 58
D + RG GF+TF S D+VE +M + H+LGG V + +A PK+ D GR S
Sbjct: 223 DHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGVGDSSSNGRHS 282
Query: 59 HGG 61
GG
Sbjct: 283 RGG 285
>gi|357616936|gb|EHJ70495.1| hypothetical protein KGM_10405 [Danaus plexippus]
Length = 441
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHE 162
K+FVGR ++ TA+DLR YFSRFG + DV+VP+ R FGFVTF + VA + H
Sbjct: 205 KVFVGRCTEDMTADDLRDYFSRFGEVTDVFVPR--PFRAFGFVTFLDPEVAQSLCGEDHV 262
Query: 163 ICGQQVAIDSATP 175
I G V++ SA P
Sbjct: 263 IKGASVSVSSAAP 275
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 97 SQRIGKKIFVGRL-----PQEATAEDLRRYFSRFGRILDVYVP--KRTGHRGFGFVTFAE 149
++R+ KK+ L P + T E +++YF +FG ++ V + K +GFGF+ FA
Sbjct: 109 TKRLEKKLTCSDLICLGLPWKTTEESIKQYFEQFGEVVMVQLKRDKNGSFKGFGFIRFAT 168
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ V +
Sbjct: 169 YASQMRALAQRHNIDGRWVDV 189
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GF+TF+ ++ ++ D H + G TV V R PKE+ MS
Sbjct: 133 KDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKEE-------MSS--- 182
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + KKIFVG +P T + L+ +F
Sbjct: 183 ---------------------KDGPKT------------KKIFVGGIPPSLTEDKLKEHF 209
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATP 175
S +G++++ + + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 210 SSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEP 267
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHR---GFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K R GFGFVTF++ V DRV
Sbjct: 101 KIFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 160
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 161 EHVIDGRTVEVKRTVPKEE 179
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE---DDFRPVGRMS 58
D + RG GF+TF S D+VE +M + H+LGG V + +A PK+ D GR S
Sbjct: 223 DHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGVGDSSSNGRHS 282
Query: 59 HGG 61
GG
Sbjct: 283 RGG 285
>gi|169613076|ref|XP_001799955.1| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
gi|160702644|gb|EAT82933.2| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
Length = 453
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+E+
Sbjct: 59 RDSATGRSRGFGFLTFRDPKCVNTVMVKEHYLDGKIIDPKRAIPREE------------- 105
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEAT ED +F
Sbjct: 106 -----------------------------------QERTSKIFVGGVSQEATEEDFTNFF 130
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
FGR++D + + K TG RGFGFVTF + D R+ +I G+ + + A P
Sbjct: 131 KSFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRQPLQILGKPIEVKRAQP 186
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 116 EDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 172
E L+ YFS+FG + + V + + RGFGF+TF + + V + H + G+ +
Sbjct: 40 ESLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNTVMVKEHYLDGKIIDPKR 99
Query: 173 ATPLDD 178
A P ++
Sbjct: 100 AIPREE 105
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 141 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 187
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA D + +F
Sbjct: 188 -----------------------------------QEKTSKIFVGGVSQEANEHDFKEFF 212
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + EICG+ + + A P
Sbjct: 213 AQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLEICGKPIEVKKAQP 268
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 169 EHYLDGKIIDPKRAIPRDE 187
>gi|156395208|ref|XP_001637003.1| predicted protein [Nematostella vectensis]
gi|156224112|gb|EDO44940.1| predicted protein [Nematostella vectensis]
Length = 291
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 50/176 (28%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYG 63
D ++ RG GF+ F + +N++ +H + G V PKE+
Sbjct: 149 DPNTRRSRGFGFVRFKKDEDAKNVLSTSHRIQGRLCEVRLPRPKEE-------------- 194
Query: 64 AYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFS 123
L P KK+FVGRLP+ T + L YF+
Sbjct: 195 --------------LNVP--------------------KKLFVGRLPESTTEKTLMEYFA 220
Query: 124 RFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
+FG + DVY+PK H FGFVTFA +A +V ++H I G + I A P A
Sbjct: 221 QFGEVTDVYIPKPFRH--FGFVTFASGELAKKVLSQNHRISGSLLNITFAEPKSTA 274
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRI--LDVYV-PKRTGHRGFGFVTFAEEVVADRV 156
+G I +G LP T +++ YF+RFG I +V + P RGFGFV F ++ A V
Sbjct: 114 VGDLIVLG-LPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNV 172
Query: 157 SRRSHEICGQQVAIDSATPLDDAG-PSQNFM 186
SH I G+ + P ++ P + F+
Sbjct: 173 LSTSHRIQGRLCEVRLPRPKEELNVPKKLFV 203
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 94/209 (44%), Gaps = 53/209 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A A V+ ++ D H L G TV + R P+ G S G
Sbjct: 79 KDRHTGQPRGFGFVTYADASVVDKVIEDKHILDGRTVEIKRTIPR-------GNTSKG-- 129
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
P + KKIFVG +P T ++ + YF
Sbjct: 130 ------------------------PKT------------KKIFVGGIPTTITEDEFKDYF 153
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTF-AEEVVADRVSR-RSHEICGQQVAIDSATPL- 176
S+FG++ + + + TG RGFGF+TF +E+VV + +S+ + E+ G+QV I A P
Sbjct: 154 SKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAEPKK 213
Query: 177 --DDAGPSQNFMMNAAETFGGYGGPMRTY 203
DAGP GG GG +Y
Sbjct: 214 PSSDAGPVHGIDNRPPYIPGGVGGFRDSY 242
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L + T ++FS++G + D + K TG RGFGFVT+A+ V D+V
Sbjct: 47 KIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIED 106
Query: 160 SHEICGQQVAIDSATP 175
H + G+ V I P
Sbjct: 107 KHILDGRTVEIKRTIP 122
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA +D +++F
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQEANEQDFKQFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|242023524|ref|XP_002432182.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212517579|gb|EEB19444.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
Length = 456
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+FVGR ++ TAEDLR YFS+FG + DV++PK R F FVTF + VA +
Sbjct: 188 QQVPCKVFVGRCTEDITAEDLREYFSKFGEVTDVFIPK--PFRAFAFVTFLDPEVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATP 175
H I G V + +A P
Sbjct: 246 GEDHIIKGTSVHVSNAAP 263
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 83 LYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGH 139
L ++ + R E+ + I +G LP + T + LR YF +G +L V PK
Sbjct: 88 LLENSTAKTKRMETKLKCSDLIVLG-LPWKTTEQQLREYFETYGEVLMAQVKKDPKSGQS 146
Query: 140 RGFGFVTFAEEVVADRVSRRSHEI 163
+GFGFV F RV + H I
Sbjct: 147 KGFGFVRFGSYEAQARVLTQRHMI 170
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 85/203 (41%), Gaps = 44/203 (21%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E ++++ H + G V +A P++D
Sbjct: 39 RDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMVEAKKAVPRDDQH----------- 87
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L GS +G S+ KKIFVG L T D R+YF
Sbjct: 88 -------------------ALSKSGGSAHGSPGPSRT--KKIFVGGLASTVTEADFRKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 127 EQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQ-------NFMMNAAETF 193
GPS N+ +N A F
Sbjct: 187 SPGPSMRSPVGGFNYAVNRANNF 209
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR YF ++G +++ + + TG RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + + G GP RT G L
Sbjct: 67 KHMIDGRMVEAKKAVPRDD----QHALSKSGGSAHGSPGPSRTKKIFVGGL 113
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF A +V +MV H L G + RA P+++ R
Sbjct: 32 RDGASGRSRGFGFLTFKDARTVNIVMVKEHYLDGKIIDPKRAIPRDEQER---------- 81
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT +D ++YF
Sbjct: 82 --------------------------------------TSKIFVGGVSQEATEQDFKQYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEGPLEILGKPIEVKKAQP 159
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSRR 159
+F+G L E T E L+ YFS+FG +L+ V R G RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTV-MRDGASGRSRGFGFLTFKDARTVNIVMVK 59
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 37/196 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E +++ H + G V +A P++D H +
Sbjct: 39 KDRATGRARGFGFVVFADPIVAERVVLLKHIIDGKIVEAKKAVPRDD---------HAVF 89
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N+ +L PG KKIFVG L T + ++YF
Sbjct: 90 NKSNS--------------SLQGSPG---------PSTTKKIFVGGLASSVTEAEFKKYF 126
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
++FG I DV V RT RGFGF+++ E D+V +++ HE+ G+ V + A P +
Sbjct: 127 AQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDKVLQKTFHELNGKMVEVKLAVPKEM 186
Query: 179 AGPSQNFMMNAAETFG 194
A + MN +FG
Sbjct: 187 ALNTMRNQMN-VNSFG 201
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + LR YF FG +L+ + K TG RGFGFV FA+ +VA+RV
Sbjct: 7 KLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERVVLL 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHIIDGKIVEAKKAVPRDD 85
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 51/211 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TF+ +V ++ + H L G T+ PK + R + + GG
Sbjct: 48 KNAESGRSRGFGFVTFSDPANVNTVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 102
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P K+F+G LP T DLR +
Sbjct: 103 -----------------GYP---------------------KVFLGGLPSNVTETDLRTF 124
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F+RFG++++V Y ++ RGFGF++F +E DR VS + G+QV I A P D
Sbjct: 125 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAEPRD 184
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
+G ++ M A+ +G P G M G
Sbjct: 185 GSGGNK---MGGADPSSAWGPPQAPMGMMQG 212
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T ++L+R+FSR+G ++D V K RGFGFVTF++ + V +
Sbjct: 16 KLFVGGLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNTVLQN 75
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 76 GPHTLDGRTIDPKPCNP 92
>gi|307166910|gb|EFN60814.1| TAR DNA-binding protein 43 [Camponotus floridanus]
Length = 284
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA +
Sbjct: 3 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 60
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 199
H I G V + +A P + + GG G P
Sbjct: 61 GEDHIIKGVSVHVSNAAPKSEGNNKNFNNQVNSNMRGGRGAP 102
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 32/179 (17%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA + ++ ++ D H + G TV +A +E+
Sbjct: 39 RDKTTGRPRGFGFVVFADPNILDRVLQDKHTIDGRTVEAKKALSREEQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
R L P G KKIFVG LP T ++ R+YF
Sbjct: 87 -------QTNARSGNLNPPR---------NSGSGGNIRTKKIFVGGLPPALTDDEFRQYF 130
Query: 123 SRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+G + DV Y RGFGF++F E DRV ++ H++ G+QV + A P D
Sbjct: 131 EAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFHDLNGKQVEVKRALPKD 189
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T + L+ YF ++G ++ V K TG RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDRVLQD 66
Query: 160 SHEICGQQVAIDSA 173
H I G+ V A
Sbjct: 67 KHTIDGRTVEAKKA 80
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+
Sbjct: 99 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREE------------- 145
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ P +KIFVG LP T ++LR +F
Sbjct: 146 ------------MSSKDGPKT------------------RKIFVGGLPSSLTEDELREHF 175
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATPLD 177
S +G+I++ + + TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 176 SPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 235
Query: 178 DAG 180
G
Sbjct: 236 HGG 238
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 126
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 127 EHVIDGRTVEVKRTVPREE 145
>gi|391331401|ref|XP_003740135.1| PREDICTED: TAR DNA-binding protein 43-like [Metaseiulus
occidentalis]
Length = 479
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVA 153
G++S+ + +K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 191 GQASE-LSRKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP--FRAFAFVTFVDAEVA 247
Query: 154 DRVSRRSHEICGQQVAIDSATPLDD 178
+ H I G + + +A P +D
Sbjct: 248 QSLCGEDHIIKGTSIHVSNAVPKND 272
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS 160
+ V LP + T ++LR+YF FG +L V PK +GFGF+ F+ RV +
Sbjct: 114 LIVLGLPWKTTEQELRQYFEAFGEVLMAQVKKDPKTQQSKGFGFIRFSSYESQIRVLSKR 173
Query: 161 HEICGQQVAI 170
H I G+ +
Sbjct: 174 HMIDGRWCDV 183
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ MS
Sbjct: 212 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREE-------MSS--- 261
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + +KIFVG LP T ++LR +F
Sbjct: 262 ---------------------KDGPKT------------RKIFVGGLPSSLTEDELREHF 288
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G+I++ + + TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 289 SPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 348
Query: 178 DAG 180
G
Sbjct: 349 HGG 351
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 180 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 239
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 240 EHVIDGRTVEVKRTVPREE 258
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 78/185 (42%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TFA SVE ++ + HEL G + A PK
Sbjct: 55 KDPTTRRSRGFGFVTFADPASVEKVLANGPHELDGKKIDPKIAFPK-------------- 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KK+FVG L T ED++ Y
Sbjct: 101 ----RAHPKMVTRT--------------------------KKVFVGGLSAPTTLEDVKNY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FGRI D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 131 FQQFGRIEDAMLMFDKQTNRHRGFGFVTFELEDVVDKVCEVHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPS 182
P+
Sbjct: 191 VMMPN 195
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + E LR YFS+FG I +V V P RGFGFVTFA+ ++V +
Sbjct: 23 KMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEKVLAN 82
Query: 159 RSHEICGQQVAIDSATP 175
HE+ G+++ A P
Sbjct: 83 GPHELDGKKIDPKIAFP 99
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE-------------D 49
D+ + HRG GF+TF D V+ + V HE+ V +A PKE +
Sbjct: 145 DKQTNRHRGFGFVTFELEDVVDKVCEVHFHEINNKMVECKKAQPKEVMMPNSVARGRGAE 204
Query: 50 DFRPVGRMSHGGYGAY 65
P+G ++ G+ AY
Sbjct: 205 LVWPLGALTEAGFPAY 220
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 84/209 (40%), Gaps = 50/209 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ THEL G + A P+ + V R
Sbjct: 55 KDPTTRRSRGFGFITFADPASVDKVLAQGTHELDGKKIDPKVAFPRRTHPKMVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 111 ----------------------------------------KKIFVGGLSAPTTLEDVKNY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 131 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRM 206
P+ N A G Y M + G +
Sbjct: 191 VMLPA-NLAKTRAAGRGAYDNFMWSLGAL 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF+++G I +V V P RGFGF+TFA+ D+V ++
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G+++ A P
Sbjct: 83 GTHELDGKKIDPKVAFP 99
>gi|332029556|gb|EGI69445.1| TAR DNA-binding protein 43 [Acromyrmex echinatior]
Length = 469
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA +
Sbjct: 188 QQVPCKVFVGRCTEDLTADDLREYFSKFGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 199
H I G V + +A P + + GG G P
Sbjct: 246 GEDHIIKGVSVHVSNAAPKSEGNNKNFNNQVNSNMRGGRGAP 287
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G LP + T ++LR YF FG +L V K ++G +GFGF+ F
Sbjct: 98 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGS 156
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ +
Sbjct: 157 YESQLRCLAQRHMIDGRWCDV 177
>gi|322780873|gb|EFZ10102.1| hypothetical protein SINV_16596 [Solenopsis invicta]
Length = 286
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA +
Sbjct: 5 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 62
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 199
H I G V + +A P + + GG G P
Sbjct: 63 GEDHIIKGVSVHVSNAAPKSEGNNKNFNNQVNSNMRGGRGAP 104
>gi|345490453|ref|XP_001602436.2| PREDICTED: TAR DNA-binding protein 43-like [Nasonia vitripennis]
Length = 476
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA +
Sbjct: 187 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 244
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNF 185
H I G V + +A P + NF
Sbjct: 245 GEDHIIKGVSVHVSNAAPKSEGNNRTNF 272
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G LP + T ++LR YF FG +L V K ++G +GFGF+ F
Sbjct: 97 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGS 155
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ +
Sbjct: 156 YESQLRCLAQRHMIDGRWCDV 176
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA +D + +F
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQEANEQDFKSFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ F+ SV+ +VD H L G TV V RA +E+ A N
Sbjct: 47 RGFGFVVFSDPSSVDAALVDPHTLDGRTVDVKRALSREE---------QQAAKAANPSAG 97
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
G G G R KKIFVG LP T ++ R+YF +G + D
Sbjct: 98 GRHASGGGGGGGGAGGGGGGGGGDAGGART-KKIFVGGLPSNLTEDEFRQYFQTYGVVTD 156
Query: 131 VYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
V V RGFGF+TF E DRV ++ H++ G+ V + A P
Sbjct: 157 VVVMYDQNTQRPRGFGFITFDAEDAVDRVLHKTFHDLSGKMVEVKRALP 205
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ MS
Sbjct: 99 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREE-------MSS--- 148
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + +KIFVG LP T ++LR +F
Sbjct: 149 ---------------------KDGPKT------------RKIFVGGLPSSLTEDELREHF 175
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G+I++ + + TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 176 SPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 235
Query: 178 DAG 180
G
Sbjct: 236 HGG 238
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 67 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 126
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 127 EHVIDGRTVEVKRTVPREE 145
>gi|295673172|ref|XP_002797132.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226282504|gb|EEH38070.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 642
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G V + + P + + + A
Sbjct: 132 RGFGFLTFKDPKTVNTVMVKEHYLDGKIVGISFC-----NHYPQAKQAENTAPIWRAS-K 185
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
R + L T P R E Q KIFVG + QEAT +D +++F +FGR++D
Sbjct: 186 LRLRASRLTKGTQQIDPKRAIPRDE--QERTSKIFVGGVSQEATEQDFKQFFMQFGRVVD 243
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K +G RGFGFVTF E + EI G+ + + A P
Sbjct: 244 ATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQP 291
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 92 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 151
Query: 160 SHEICGQQVAIDSATPLDDAGPSQN 184
H + G+ V I A ++N
Sbjct: 152 EHYLDGKIVGISFCNHYPQAKQAEN 176
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 50/178 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF SVEN++ V H L G + ATPK
Sbjct: 92 KDPVTQRSRGFGFITFEEPSSVENVLKVPVHTLDGKKIDPKHATPK-------------- 137
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GRG+++ + KKIFVG + Q+ ++++++ Y
Sbjct: 138 ------------------------------GRGKTNGKT-KKIFVGGVSQDTSSDEVKVY 166
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
FS+FG++ + + + HRGFGFVTF E DRV H I ++V A P
Sbjct: 167 FSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDRVCEIHFHNIKNKKVECKKAMP 224
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR+YF FG I DV + P RGFGF+TF E + V +
Sbjct: 60 KLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENVLKV 119
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 120 PVHTLDGKKIDPKHATP 136
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + ++V+ + + H + V +A PKE
Sbjct: 178 MLMDQQTKRHRGFGFVTFENEETVDRVCEIHFHNIKNKKVECKKAMPKE 226
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + + G+P+ G G + +KIFVG LP T D + YF
Sbjct: 87 ----NMVNRSNSSSIQGSPS---------GPGRT-----RKIFVGGLPSSVTESDFKTYF 128
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD- 177
+FG DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 129 EQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKEL 188
Query: 178 DAGPSQ 183
GPS+
Sbjct: 189 SPGPSR 194
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS FG +++ + K TG RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + N++ G GP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPSGPGRTRKIFVGGL 115
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 132 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 178
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA +D +++F
Sbjct: 179 -----------------------------------QEKTSKIFVGGVSQEANEQDFKQFF 203
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 204 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVKKAQP 259
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 100 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 159
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 160 EHYLDGKIIDPKRAIPRDE 178
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GF+TF+ ++ ++ D H + G TV V R PKE
Sbjct: 126 KDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKE-------------- 171
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ D P + KKIFVG +P T + L+ +F
Sbjct: 172 ------------------LSSKDGPKT------------KKIFVGGIPPSLTEDKLKEHF 201
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATP 175
S +G++++ + + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 202 SSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEP 259
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHR---GFGFVTFAEEVVADRVSRR 159
K+FVG + E T E ++F ++G I D + K R GFGFVTF++ V DRV
Sbjct: 94 KVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 153
Query: 160 SHEICGQQVAIDSATPLD 177
H I G+ V + P +
Sbjct: 154 EHVIDGRTVEVKRTVPKE 171
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE---DDFRPVGRMS 58
D + RG GF+TF S D+VE +M + H+LGG V + +A PK+ D GR S
Sbjct: 215 DHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRHS 274
Query: 59 HGG 61
GG
Sbjct: 275 RGG 277
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 144 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 190
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA +D +++F
Sbjct: 191 -----------------------------------QEKTSKIFVGGVSQEANEQDFKQFF 215
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 216 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVKKAQP 271
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 172 EHYLDGKIIDPKRAIPRDE 190
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 92/224 (41%), Gaps = 66/224 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+
Sbjct: 62 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR------------- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 109 -----AHPKMVTR--------------------------TKKIFVGGLSAPTTLEDVKSY 137
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 138 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 197
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS 221
P+ N A+T R G +D+ +G+G+
Sbjct: 198 VMLPA-----NLAKT------------RAAGRSAYDNIMWGLGT 224
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF+ SV+N++ V H L G + ATPK +P
Sbjct: 74 KDPVTQRSRGFGFITFSEPSSVDNVLKVPIHTLDGKKIDPKHATPKNRPKQP-------- 125
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + Q+ +A++++ Y
Sbjct: 126 -------------------------------------NKTKKIFVGGVSQDTSADEVKAY 148
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 149 FSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 208
Query: 178 DAGPSQNFM 186
S +
Sbjct: 209 AVQASAQLL 217
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF FG + DV + P RGFGF+TF+E D V +
Sbjct: 42 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 101
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 102 PIHTLDGKKIDPKHATP 118
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 160 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 208
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+
Sbjct: 88 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTVEVKRTVPREE------------- 134
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N TR KIF+G LP T ++L+ +F
Sbjct: 135 --MNTKDGPKTR----------------------------KIFIGGLPASLTEDELKDHF 164
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
S +G++L+ + + TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 165 SLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 56 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 115
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 116 EHVIDGRTVEVKRTVPREE 134
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE--DDFRPVGRMSH 59
D + RG GF+TF S DSVE ++ + +LGG V + +A PK+ D GR S
Sbjct: 178 DHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDNIGNGRSSQ 237
Query: 60 GGYGAYNAY 68
GG G + Y
Sbjct: 238 GGGGYRSTY 246
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 92/224 (41%), Gaps = 66/224 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+
Sbjct: 63 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR------------- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 110 -----AHPKMVTR--------------------------TKKIFVGGLSAPTTLEDVKSY 138
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 139 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 198
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS 221
P+ N A+T R G +D+ +G+G+
Sbjct: 199 VMLPA-----NLAKT------------RAAGRSAYDNIMWGLGT 225
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 31 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 90
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 91 GTHELDGKKVDPKVAFP 107
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 81/183 (44%), Gaps = 48/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ MS
Sbjct: 116 KDKHTKMPRGFGFVTFSDPSVIDRVLEDEHTIDGRTVEVKRTVPREE-------MS---- 164
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
D P + +KIFVG +P T L+ +F
Sbjct: 165 --------------------TKDGPKT------------RKIFVGGIPTSLTEGKLKEHF 192
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLD 177
S +G++ + + V TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 193 SSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRAEPKK 252
Query: 178 DAG 180
G
Sbjct: 253 PGG 255
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V DRV
Sbjct: 84 KIFVGGVAWETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLED 143
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 144 EHTIDGRTVEVKRTVPREE 162
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 97/233 (41%), Gaps = 56/233 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT++ V+ ++ +TH + V + R PK
Sbjct: 48 KDRHTGRPRGFGFITYSDPTVVDTVIAETHIINDKQVEIKRTIPK--------------- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G ES KKIFVG +P ++ + +F
Sbjct: 93 -----------------------------GSAESKDFKTKKIFVGGIPTSMNEDEFKGFF 123
Query: 123 SRFGRILDV-----YVPKRTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
S++G+++D +V KR+ RGFGF+ F E+V D V + ++ G QV I A P
Sbjct: 124 SKYGKVVDCEIIRDHVSKRS--RGFGFIVFDNELVVDNVLSEGNMIDMLGTQVEIKKAEP 181
Query: 176 LDDAGPSQNFMMNAAETFG-GYGGPMRTYGRMYGSLDFDDWGYGMGSGRPSRG 227
+ P+ + +E+ G GY +G Y S F G+G S R S G
Sbjct: 182 KKPSNPASSGHGYGSESRGRGYSDSYGGFGNSYSS--FGSGGFGPASYRSSGG 232
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T E +YF ++G I+D + K TG RGFGF+T+++ V D V
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDPTVVDTVIAE 75
Query: 160 SHEICGQQVAIDSATP 175
+H I +QV I P
Sbjct: 76 THIINDKQVEIKRTIP 91
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF+ SV+N++ V H L G + ATPK +P
Sbjct: 89 KDPVTQRSRGFGFITFSEPSSVDNVLKVPIHTLDGKKIDPKHATPKNRPKQP-------- 140
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + Q+ +A++++ Y
Sbjct: 141 -------------------------------------NKTKKIFVGGVSQDTSADEVKAY 163
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 164 FSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 223
Query: 178 DAGPSQNFM 186
S +
Sbjct: 224 AVQASAQLL 232
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF FG + DV + P RGFGF+TF+E D V +
Sbjct: 57 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 116
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 117 PIHTLDGKKIDPKHATP 133
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 175 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 223
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 47/214 (21%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI F+ +V+ ++ D H + G V + RA P+E+ R
Sbjct: 39 RDKMTGRARGFGFIGFSEPTAVDRVLQDKHTIDGRQVELKRAVPREEHQR---------- 88
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
NA S GS G G + KKIFVG L T +D + YF
Sbjct: 89 ---NAQKS-----------------GSNVGAGPRT----KKIFVGGLAPTVTEDDFKGYF 124
Query: 123 SRFGRILDV-----YVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPL 176
+FG I DV ++ +R RGFGF+TF E D+V ++ HE+ + V + A P
Sbjct: 125 EQFGTITDVVVMYDHISQRP--RGFGFITFDSEEAVDKVVMKNFHELHDKTVEVKRALPK 182
Query: 177 DDAGPSQNFMMNAAETFGG-----YGGPMRTYGR 205
+ + S + A +G YG P GR
Sbjct: 183 EMSPGSARARSSPAGPYGNPQNSRYGAPQPPAGR 216
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T E L+ YF +G +++ + K TG RGFGF+ F+E DRV +
Sbjct: 7 KVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDRVLQD 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+QV + A P ++
Sbjct: 67 KHTIDGRQVELKRAVPREE 85
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 92/224 (41%), Gaps = 66/224 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+
Sbjct: 76 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR------------- 122
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 123 -----AHPKMVTR--------------------------TKKIFVGGLSAPTTLEDVKSY 151
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 152 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 211
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS 221
P+ N A+T R G +D+ +G+G+
Sbjct: 212 VMLPA-----NLAKT------------RAAGRSAYDNIMWGLGT 238
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 104 GTHELDGKKVDPKVAFP 120
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 92/224 (41%), Gaps = 66/224 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+
Sbjct: 72 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR------------- 118
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 119 -----AHPKMVTRT--------------------------KKIFVGGLSAPTTLEDVKSY 147
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 148 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 207
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS 221
P+ N A+T R G +D+ +G+G+
Sbjct: 208 VMLPA-----NLAKT------------RAAGRSAYDNIMWGLGT 234
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 40 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 99
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 100 GTHELDGKKVDPKVAFP 116
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 92/224 (41%), Gaps = 66/224 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+
Sbjct: 76 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR------------- 122
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 123 -----AHPKMVTR--------------------------TKKIFVGGLSAPTTLEDVKSY 151
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 152 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 211
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS 221
P+ N A+T R G +D+ +G+G+
Sbjct: 212 VMLPA-----NLAKT------------RAAGRSAYDNIMWGLGT 238
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 103
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 104 GTHELDGKKVDPKVAFP 120
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 92/224 (41%), Gaps = 66/224 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+
Sbjct: 62 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRR------------- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 109 -----AHPKMVTR--------------------------TKKIFVGGLSAPTTLEDVKSY 137
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 138 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 197
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGS 221
P+ N A+T R G +D+ +G+G+
Sbjct: 198 VMLPA-----NLAKT------------RAAGRSAYDNIMWGLGT 224
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|389610037|dbj|BAM18630.1| heterogeneous nuclear ribonucleoprotein 27c [Papilio xuthus]
Length = 318
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHE 162
K+FVGR ++ TA+DLR YFS FG + DV+VP+ R FGFVTF + VA + H
Sbjct: 206 KVFVGRCTEDMTADDLREYFSSFGEVTDVFVPR--PFRAFGFVTFLDPEVAQSLCGEDHV 263
Query: 163 ICGQQVAIDSATPLDDAGPSQNF 185
I G V++ SA P +QN+
Sbjct: 264 IKGASVSVSSAAPKIKNKSNQNW 286
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 97 SQRIGKKIFVGRL-----PQEATAEDLRRYFSRFGRILDVYVPKRTG--HRGFGFVTFAE 149
++R+ KK+ L P ++T E +++YF +FG ++ V + K +GFGF+ FA
Sbjct: 110 TKRLEKKLTCSDLICLGLPWKSTEESIKQYFEQFGEVVMVQLKKDKNGSFKGFGFIRFAT 169
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ V +
Sbjct: 170 YASQMRALAQRHNIDGRWVDV 190
>gi|156098334|ref|XP_001615199.1| nucleic acid binding factor [Plasmodium vivax Sal-1]
gi|148804073|gb|EDL45472.1| nucleic acid binding factor, putative [Plasmodium vivax]
Length = 753
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSR- 158
+IFV RLP EA +DL +YFS++G+I+D+YV K ++GFGFV+F ++ D+V +
Sbjct: 364 RIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD 423
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H ICG+++ +D A+ D+
Sbjct: 424 KLHIICGKEIVVDVASMRDN 443
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 65 YNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSR 124
Y ++ + Y G P + PG G+ + G K+FV +L T E LR YF
Sbjct: 631 YPPNVAPSGSYRPPGQPFVRKLPG-----GDEWNKRGYKLFVTKLNSVTTIETLRNYFEA 685
Query: 125 FGRILDVYVPK---RTGHRGFGFVTF-----AEEVVADRVSRRSHEICGQQVAIDSATP 175
FG I+D+Y+P RG FVTF +++++++ S+ H I G++V +D A P
Sbjct: 686 FGEIIDIYMPNDVCTNRPRGIAFVTFLDNDCVKKILSNKNSK--HIIDGKEVVVDLADP 742
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 43/187 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D+ ++ RG GF+ +A A +V ++ + H L + TPK
Sbjct: 41 RDKLTQMSRGFGFVKYADAGAVAEVLKNRPHTLDNKKIDPKPCTPKT------------- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
I + A + E +Q KIF+G L Q AT E+++ Y
Sbjct: 88 -------IQQQKKNAQI----------------EHTQT--HKIFIGGLAQNATEEEVKAY 122
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
FS++G + +V + H+GFGFVTF E D+ V + HEICG++V ATP +
Sbjct: 123 FSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAVGKHFHEICGKRVEAKRATPRE 182
Query: 178 DAGPSQN 184
+QN
Sbjct: 183 TMRRNQN 189
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEE-VVADRVSR 158
KIFVG L +E T + LR++FS +G I++ V + RGFGFV +A+ VA+ +
Sbjct: 9 KIFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGAVAEVLKN 68
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 192
R H + +++ TP +N + +T
Sbjct: 69 RPHTLDNKKIDPKPCTPKTIQQQKKNAQIEHTQT 102
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ +A +V+ +++ H L G TV V RA +E+ S
Sbjct: 47 RGFGFVVYADPAAVDAALLEPHTLDGRTVDVKRALSREEQ-----------------QAS 89
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
A P+ + G G ++S KKIFVG LP T ++ R+YF FG + D
Sbjct: 90 KAVN------PSTGRNTGGGGGGNDASGTRTKKIFVGGLPSSLTDDEFRQYFQTFGAVTD 143
Query: 131 VYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
V V RGFGF+TF E DRV ++ H++ G+ V + A P
Sbjct: 144 VVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRALP 192
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T E L +FS FG + V K TG RGFGFV +A+ D
Sbjct: 7 KLFIGGISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAALLE 66
Query: 160 SHEICGQQVAIDSA 173
H + G+ V + A
Sbjct: 67 PHTLDGRTVDVKRA 80
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 36/177 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A PK+D
Sbjct: 39 KDRTTGRARGFGFVVFADPAVAERVIKEKHNIDGRMVEAKKAVPKDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
S +R + +++ PG GR +KIFVG L T D ++YF
Sbjct: 87 -------SILSRNSG----SIHGSPGP--GRT-------RKIFVGGLASTVTESDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
+FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P
Sbjct: 127 DQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVP 183
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + L+ YFS +G +++ + K TG RGFGFV FA+ VA+RV +
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPKDD----QSILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D ++ RG GFIT+ S ++V+ +++ T HEL G V V RA PKE P+ R GG+
Sbjct: 140 DHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPI-RSQLGGF 198
Query: 63 G----AYNAYISA 71
N+++SA
Sbjct: 199 NYGLSRVNSFLSA 211
>gi|221055866|ref|XP_002259071.1| nucleic acid binding factor [Plasmodium knowlesi strain H]
gi|193809142|emb|CAQ39844.1| nucleic acid binding factor, putative [Plasmodium knowlesi strain
H]
Length = 760
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 4/79 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSR- 158
+IFV RLP EA +DL +YFS++G+I+D+YV K ++GFGFV+F ++ D+V +
Sbjct: 372 RIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD 431
Query: 159 RSHEICGQQVAIDSATPLD 177
+ H ICG+++ +D A+ D
Sbjct: 432 KLHIICGKEIVVDVASMRD 450
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 75 YAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP 134
Y + G P + PG G+ + G K+FV +L T E LR YF FG I+D+Y+P
Sbjct: 648 YRSPGQPFVRKLPG-----GDEWNKRGYKLFVTKLNSVTTIETLRNYFEAFGEIIDIYMP 702
Query: 135 K---RTGHRGFGFVTF-----AEEVVADRVSRRSHEICGQQVAIDSATP 175
RG FVTF +++++++ S+ H I G++V +D A P
Sbjct: 703 NDVCTNRPRGIAFVTFLDNDCVKKILSNKNSK--HIIDGKEVVVDLADP 749
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++ R
Sbjct: 32 RDGATGRSRGFGFLTFKDAKTVNTVMVKEHYLDGKIIDPKRAIPRDEQERT--------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + Q+AT +D +++F
Sbjct: 83 ---------------------------------------SKIFVGGVSQDATEQDFKKFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQP 159
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 144 RDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE------------- 190
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA +D +++F
Sbjct: 191 -----------------------------------QEKTSKIFVGGVSQEANEQDFKQFF 215
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 216 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIEVKKAQP 271
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 172 EHYLDGKIIDPKRAIPRDE 190
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 36/179 (20%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ + RG GF+ FA E ++ + H + G V +A PK+D
Sbjct: 37 IMKDRTTGRARGFGFVVFADPAVAERVIKEKHNIDGRMVEAKKAVPKDDQ---------- 86
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
S +R + +++ PG GR +KIFVG L T D ++
Sbjct: 87 ---------SILSRNSG----SIHGSPGP--GRT-------RKIFVGGLASTVTESDFKK 124
Query: 121 YFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
YF +FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P
Sbjct: 125 YFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVP 183
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + L+ YFS +G +++ + K TG RGFGFV FA+ VA+RV +
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD Q+ + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPKDD----QSILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D ++ RG GFIT+ S ++V+ +++ T HEL G V V RA PKE P+ R GG+
Sbjct: 140 DHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPI-RSQLGGF 198
Query: 63 G----AYNAYISA 71
N+++SA
Sbjct: 199 NYGLSRVNSFLSA 211
>gi|443686443|gb|ELT89721.1| hypothetical protein CAPTEDRAFT_175992 [Capitella teleta]
Length = 444
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 95 ESSQRI-GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVA 153
E +Q I +K+F+GR ++ TA+DLR YF++FG ++DV++PK R F FVTFA+ VA
Sbjct: 183 EGTQHIVNRKVFIGRCTEDMTADDLRSYFNKFGEVVDVFIPKP--FRAFAFVTFADPEVA 240
Query: 154 DRVSRRSHEICGQQVAIDSATP 175
+ H I G V + +A P
Sbjct: 241 HALCGEDHIIKGASVHVSNAAP 262
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+ V LP ++T +DL+ YFS+FG +L V V + +TG +GFGFV FA+ +
Sbjct: 107 LIVLGLPWKSTEDDLQAYFSQFGELLMVQVKRDLKTGQSKGFGFVRFADYEAQLKCLAVR 166
Query: 161 HEICGQQVAI 170
H I G+ +
Sbjct: 167 HMIDGRWCDV 176
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ V R G
Sbjct: 44 KDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPRGMQPEKV-RTKDGW 102
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G+ ++ KKIFVG +P +LR Y
Sbjct: 103 KGS------------------------------KADSNKSKKIFVGGIPHNCGEPELREY 132
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 133 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Query: 178 DAGPSQ 183
P Q
Sbjct: 193 SNAPGQ 198
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 78/186 (41%), Gaps = 49/186 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ SV+ ++ + HEL G + A PK
Sbjct: 84 KDPSTRRSRGFGFVTFSDPASVDKVLANGPHELDGKKIDPKIAFPKR------------- 130
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KK+FVG L T ED++ Y
Sbjct: 131 -----AHPKMVTRT--------------------------KKVFVGGLSAPTTLEDVKNY 159
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FGRI D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 160 FQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKVCEIHFHEINNKMVECKKAQPKE 219
Query: 178 DAGPSQ 183
P+
Sbjct: 220 VMMPNN 225
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 78 LGAPTLY----DHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV 133
L APT+ P + E++ GK +F+G L + E LR YFS+FG I +V V
Sbjct: 24 LCAPTMIMENDSQPTNPASPTEAAHDPGK-MFIGGLSWQTAPEGLREYFSKFGDITEVMV 82
Query: 134 ---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSATP 175
P RGFGFVTF++ D+V + HE+ G+++ A P
Sbjct: 83 MKDPSTRRSRGFGFVTFSDPASVDKVLANGPHELDGKKIDPKIAFP 128
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 44 KDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPR--GMQPEKSRTKEG 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ A + + KKIFVG +P +LR Y
Sbjct: 102 WKGSKADSNKS-----------------------------KKIFVGGIPHNCGEPELRDY 132
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 133 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Query: 178 DAGPSQ 183
P Q
Sbjct: 193 SKAPGQ 198
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 44 KDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPR--GMQPEKSRTKEG 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ A + + KKIFVG +P +LR Y
Sbjct: 102 WKGSKADSNKS-----------------------------KKIFVGGIPHNCGEPELRDY 132
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 133 FNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Query: 178 DAGPSQ 183
P Q
Sbjct: 193 SKAPGQ 198
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFADPAVTERVVTEKHTIDGRMVEAKKAVPRDD------------- 85
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +++ + + G+P PG KKIFVG L T D ++YF
Sbjct: 86 ---HQFLNKNSSSSIHGSPV----PGH-----------TKKIFVGGLSSTITEGDFKKYF 127
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+FG I DV V RGFGF+T+ E D+V + HE+ G+ V + A P +
Sbjct: 128 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELNGKMVEVKRAVPKE- 186
Query: 179 AGPSQNFMMNAAETFGGY 196
PS +M ++ GGY
Sbjct: 187 --PSPGPIMRSS--IGGY 200
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR+YFS FG +++ + K TG RGFGFV FA+ V +RV
Sbjct: 7 KLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVVTE 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 KHTIDGRMVEAKKAVPRDD 85
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + + G+P G G + +KIFVG LP T D + YF
Sbjct: 87 ----NMVNRSNSSSIQGSPG---------GPGRT-----RKIFVGGLPSSVTESDFKTYF 128
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD- 177
+FG DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 129 EQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKEL 188
Query: 178 DAGPSQ 183
GPS+
Sbjct: 189 SPGPSR 194
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS FG +++ + K TG RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+
Sbjct: 89 KDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREE------------- 135
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
T D P + +KIF+G LP T ++L+ +F
Sbjct: 136 ------------------MTTKDGPKT------------RKIFIGGLPPSLTEDELKDHF 165
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
S +G++++ + + TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 166 SSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 223
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 57 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 116
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P ++
Sbjct: 117 DHVIDGRTVEVKRTVPREE 135
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE--DDFRPVGRMSH 59
D + RG GF+TF S DSVE ++ + +LGG V + +A PK+ D GR SH
Sbjct: 179 DHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHSSNGRSSH 238
Query: 60 GGYGAYNAY 68
GG G ++Y
Sbjct: 239 GGGGYRSSY 247
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 79/199 (39%), Gaps = 50/199 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ HEL G + A P+ + V R
Sbjct: 55 KDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 111 ----------------------------------------KKIFVGGLSAPTTLEDVKNY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 131 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPSQNFMMNAAETFGGY 196
P+ N A G Y
Sbjct: 191 VMLPA-NLAKTRAANRGAY 208
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF+++G I +V V P RGFGF+TFA+ D+V ++
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G+++ A P
Sbjct: 83 GNHELDGKKIDPKVAFP 99
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 79/199 (39%), Gaps = 50/199 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ HEL G + A P+ + V R
Sbjct: 55 KDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 111 ----------------------------------------KKIFVGGLSAPTTLEDVKNY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 131 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPSQNFMMNAAETFGGY 196
P+ N A G Y
Sbjct: 191 VMLPA-NLAKTRAANRGAY 208
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF+++G I +V V P RGFGF+TFA+ D+V ++
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G+++ A P
Sbjct: 83 GNHELDGKKIDPKVAFP 99
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + + G+P G G + +KIFVG LP T D + YF
Sbjct: 87 ----NMVNRSNSSSIQGSPG---------GPGRT-----RKIFVGGLPSSVTESDFKTYF 128
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD- 177
+FG DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 129 EQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKEL 188
Query: 178 DAGPSQ 183
GPS+
Sbjct: 189 SPGPSR 194
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS FG +++ + K TG RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ F+ ++ ++ D H + V V RA +E+ + G G N S
Sbjct: 47 RGFGFVIFSDPSVLDRVLQDKHNIDTREVDVKRAMSREE------QQVSGRTGNLNTSRS 100
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
+ G+S + KKIFVG LP T E+ R+YF +G + D
Sbjct: 101 SG---------------------GDSFNKT-KKIFVGGLPPTLTDEEFRQYFEVYGPVTD 138
Query: 131 V---YVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
V Y RGFGFV+F E DRV ++ H++ G+QV + A P D
Sbjct: 139 VAIMYDQATNRPRGFGFVSFDSEDAVDRVLHKTFHDLSGKQVEVKRALPKD 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR +FS +G + V K TG RGFGFV F++ V DRV +
Sbjct: 7 KLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQD 66
Query: 160 SHEICGQQVAIDSA 173
H I ++V + A
Sbjct: 67 KHNIDTREVDVKRA 80
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ + RG GF++F S D+V+ ++ T H+L G V V RA PK+
Sbjct: 144 DQATNRPRGFGFVSFDSEDAVDRVLHKTFHDLSGKQVEVKRALPKD 189
>gi|270001223|gb|EEZ97670.1| hypothetical protein TcasGA2_TC016215 [Tribolium castaneum]
Length = 443
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F+RFG++++V Y ++ RGFGF++F +E DR VS
Sbjct: 43 KVFLGGLPSNVTETDLRTFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSE 102
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
+ G+QV I A P D +G ++ M A+ +G P G M G
Sbjct: 103 HFVNLNGKQVEIKKAEPRDGSGGNK---MGGADPSSAWGPPQAPMGMMQG 149
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + + G+P G G + +KIFVG LP T D + YF
Sbjct: 87 ----NMVNRSNSSSIQGSPG---------GPGRT-----RKIFVGGLPSSVTESDFKTYF 128
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD- 177
+FG DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 129 EQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKEL 188
Query: 178 DAGPSQ 183
GPS+
Sbjct: 189 SPGPSR 194
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS FG +++ + K TG RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
>gi|189210886|ref|XP_001941774.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187977867|gb|EDU44493.1| heterogeneous nuclear ribonucleoprotein D0 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 442
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 71/176 (40%), Gaps = 35/176 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G V K
Sbjct: 2 RDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIVCKPSTITK--------------- 46
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L A P R E Q KIFVG + QEAT ED +F
Sbjct: 47 ---------------LPANANEIDPKRAIPREE--QERTSKIFVGGVSQEATEEDFTNFF 89
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF + D R +I G+Q+ + A P
Sbjct: 90 KQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLREPLQILGKQIEVKRAQP 145
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 101/240 (42%), Gaps = 51/240 (21%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA ++ ++ D H + G V RA +E+ + ++
Sbjct: 39 KDKTTGRPRGFGFVVFADPAVLDMVLQDKHTIDGRMVEAKRALSREE------QQTNARA 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G N + + G + R KKIFVG LP T + R+YF
Sbjct: 93 GNLNPARNTS---------------------GGGNIRT-KKIFVGGLPPTLTEDGFRQYF 130
Query: 123 SRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
FG + DV Y RGFGF++F E DRV +RS H++ G+QV + A P +
Sbjct: 131 EAFGFVADVVIMYDQSTQRPRGFGFISFDTEDAVDRVLQRSFHDLNGKQVEVKRALP-KE 189
Query: 179 AGPSQNFMMNAA--ETFGGYGGPMRTY-GRM---------------YGSLDFDDWGYGMG 220
A P + +G GG +Y GRM YGS + GYG G
Sbjct: 190 ANPGGGGRSMGGSYQNYGASGGNTSSYDGRMERYMQPQGTGGGFPPYGSSGYSTAGYGYG 249
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + E LR YF ++G +L V K TG RGFGFV FA+ V D V +
Sbjct: 7 KLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFADPAVLDMVLQD 66
Query: 160 SHEICGQQVAIDSA 173
H I G+ V A
Sbjct: 67 KHTIDGRMVEAKRA 80
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFADPAVAEIVITEKHNIDGRLVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + + G+P G G + +KIFVG LP T D + YF
Sbjct: 87 ----NMVNRSNSSSIQGSPG---------GPGRT-----RKIFVGGLPSSVTESDFKTYF 128
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD- 177
+FG DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 129 EQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKEL 188
Query: 178 DAGPSQ 183
GPS+
Sbjct: 189 SPGPSR 194
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E L+ YFS FG +++ + K TG RGFGFV FA+ VA+ V
Sbjct: 7 KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFM--MNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + N++ G GGP RT G L
Sbjct: 67 KHNIDGRLVEAKKAVPRDD----QNMVNRSNSSSIQGSPGGPGRTRKIFVGGL 115
>gi|147791134|emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA ++ ++ + H + G TV RA +E+ + +
Sbjct: 39 RDKATGRPRGFGFVVFADPSILDRVLQEKHIIDGRTVEAKRALSREE------QQTSSRA 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G +N+ ++ G KKIFVG LP + E R+YF
Sbjct: 93 GNFNSARNS----------------------GGGGNVKTKKIFVGGLPPTLSEEGFRQYF 130
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
FG + DV V RGFGFV+F E DRV ++ H++ G+QV + A P D
Sbjct: 131 EAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKD 189
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + L+ YF +G + V K TG RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A ++ S NF N+A GG GG ++T G L
Sbjct: 67 KHIIDGRTVEAKRALSREEQQTSSRAGNF--NSARNSGG-GGNVKTKKIFVGGL 117
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 44 KDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPR--GMQPEKSRTKEG 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ A KKIFVG +P +LR Y
Sbjct: 102 WKGSKA-----------------------------DSNKSKKIFVGGIPHNCGEPELRDY 132
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 133 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Query: 178 DAGPSQ 183
P Q
Sbjct: 193 SKAPGQ 198
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 77/186 (41%), Gaps = 49/186 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+ + V R
Sbjct: 62 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRT---- 117
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 118 ----------------------------------------KKIFVGGLSAPTTLEDVKSY 137
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 138 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 197
Query: 178 DAGPSQ 183
P+
Sbjct: 198 VMLPAN 203
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|427795623|gb|JAA63263.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 420
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVA 153
G++S+ + +K+FVGR ++ +++DLR YFS++G + DV++PK R F FVTF + VA
Sbjct: 121 GQASE-LSRKVFVGRCTEDLSSDDLRDYFSKYGEVTDVFIPKP--FRAFAFVTFVDPDVA 177
Query: 154 DRVSRRSHEICGQQVAIDSATPLDDAGPSQN 184
+ H I G + + +A P +A PS +
Sbjct: 178 QSLCGEDHIIRGTSIHVSNAVPKSEAAPSSH 208
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
R E+ Q+ I +G LP + + +DLR+YF FG +L V PK +GFGF+ F+
Sbjct: 34 RLENRQKCSDLIVLG-LPWKTSEQDLRQYFETFGEVLMAQVKKDPKTGQSKGFGFIRFSS 92
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ +
Sbjct: 93 YESQVRALSKRHLIDGRWCDV 113
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 84/209 (40%), Gaps = 50/209 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF SV+ ++ THEL G + A P+
Sbjct: 155 KDPATRRSRGFGFITFTDPASVDKVLAQGTHELDGKKIDPKVAFPRR------------- 201
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 202 -----AHPKMVTRT--------------------------KKIFVGGLSAPTTLEDVKSY 230
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 231 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 290
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRM 206
P+ N A G Y M + G +
Sbjct: 291 VMLPA-NLAKTRAAGRGAYDNFMWSLGAL 318
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YFS++G I +V V P RGFGF+TF + D+V ++
Sbjct: 123 KMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVLAQ 182
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G+++ A P
Sbjct: 183 GTHELDGKKIDPKVAFP 199
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 44 KDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPR--GMQPEKSRTKEG 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ A KKIFVG +P +LR Y
Sbjct: 102 WKGSKA-----------------------------DSNKSKKIFVGGIPHNCGEPELRDY 132
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 133 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Query: 178 DAGPSQ 183
P Q
Sbjct: 193 SKAPGQ 198
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 78/185 (42%), Gaps = 44/185 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDF--RP----VGR 56
+D+ + RG GF+ FA ++ ++ + H + G TV RA +E+ RP GR
Sbjct: 39 RDKTTGRPRGFGFVVFADPSVLDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGR 98
Query: 57 MSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAE 116
S G G + KKIFVG LP T E
Sbjct: 99 SSSGMGGNFKT----------------------------------KKIFVGGLPSTLTEE 124
Query: 117 DLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDS 172
R+YF +G + DV V RGFGF++F E DRV ++ H++ G+ V +
Sbjct: 125 GFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKR 184
Query: 173 ATPLD 177
A P D
Sbjct: 185 ALPKD 189
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG +P + T E L+ YF+++G + + K TG RGFGFV FA+ V D V +
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A ++ S+ N + G GG +T G L
Sbjct: 67 KHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGL 117
>gi|225433229|ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA ++ ++ + H + G TV RA +E+ + +
Sbjct: 39 RDKATGRPRGFGFVVFADPSILDRVLQEKHIIDGRTVEAKRALSREE------QQTSSRA 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G +N+ ++ G KKIFVG LP + E R+YF
Sbjct: 93 GNFNSARNS----------------------GGGGNVKTKKIFVGGLPPTLSEEGFRQYF 130
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
FG + DV V RGFGFV+F E DRV ++ H++ G+QV + A P D
Sbjct: 131 EAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALPKD 189
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + L+ YF +G + V K TG RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A ++ S NF N+A GG GG ++T G L
Sbjct: 67 KHIIDGRTVEAKRALSREEQQTSSRAGNF--NSARNSGG-GGNVKTKKIFVGGL 117
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H+L G + RA P+++ R
Sbjct: 142 RGFGFLTFKDPKTVNTVMVKEHQLDGKLIDPKRAIPRDEQERTA---------------- 185
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
KIFVG + Q+AT D + +F +FGR+LD
Sbjct: 186 --------------------------------KIFVGGVSQDATESDFKEFFMKFGRVLD 213
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF ++ +R I G+ + + A P
Sbjct: 214 ATLMMDKDTGRPRGFGFVTFDNDLAVERTLEGPLSILGKPIEVKRAQP 261
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E L+ YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 102 KMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 161
Query: 160 SHEICGQQVAIDSATPLDD 178
H++ G+ + A P D+
Sbjct: 162 EHQLDGKLIDPKRAIPRDE 180
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+E+ R
Sbjct: 32 RDSATGRSRGFGFLTFKDPKCVNIVMVKEHYLDGKIIDPKRAIPREEQERT--------- 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT ED +F
Sbjct: 83 ---------------------------------------SKIFVGGVSQEATEEDFTNFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF + D R +I G+Q+ + A P
Sbjct: 104 KQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRGPLQILGKQIEVKRAQP 159
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P ++
Sbjct: 61 HYLDGKIIDPKRAIPREE 78
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 90/221 (40%), Gaps = 65/221 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF SV+ ++ THEL G + A P+
Sbjct: 19 KDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAFPRR------------- 65
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 66 -----AHPKMVTR--------------------------TKKIFVGGLSAPTTLEDVKSY 94
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 95 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 154
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG 218
P+ N A+T RT GR G+ DF W G
Sbjct: 155 VMLPA-----NLAKT--------RTAGR--GTYDF-MWSLG 179
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSA 173
LR YFS+FG I +V V P RGFGF+TF + D+V + +HE+ G+++ A
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVA 61
Query: 174 TP 175
P
Sbjct: 62 FP 63
>gi|399218473|emb|CCF75360.1| unnamed protein product [Babesia microti strain RI]
Length = 518
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFA- 148
G+ R +IFV R+P EAT++D+ YF +FG + D Y PK+ G ++GFGF++F
Sbjct: 114 GDRVNRDRYRIFVTRIPFEATSDDIENYFKQFGEVEDAYCPKQPGKAHLNKGFGFISFKN 173
Query: 149 EEVVADRVSRRSHEICGQQVAIDSAT 174
+EV+ + R H I G+++ +D AT
Sbjct: 174 DEVLQAVFNARPHTILGREIVVDKAT 199
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 68 YISAATRYAALGAPTLYD--HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRF 125
Y S A Y P YD P + S+R+ K+FVGR+ + T +R YF RF
Sbjct: 390 YSSTAQSYNNNYEPQGYDPSRPTTQGSDTLESKRLKNKLFVGRMRNDTTVATMRNYFERF 449
Query: 126 GRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS--HEICGQQVAI 170
G ++D Y+PK +T +GFGF++F E V + + H I G++V +
Sbjct: 450 GELIDAYIPKDPKTQKGKGFGFISFHNETSVRAVLQATYKHVIDGREVRL 499
>gi|427797245|gb|JAA64074.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 517
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVA 153
G++S+ + +K+FVGR ++ +++DLR YFS++G + DV++PK R F FVTF + VA
Sbjct: 218 GQASE-LSRKVFVGRCTEDLSSDDLRDYFSKYGEVTDVFIPKP--FRAFAFVTFVDPDVA 274
Query: 154 DRVSRRSHEICGQQVAIDSATPLDDAGPSQN 184
+ H I G + + +A P +A PS +
Sbjct: 275 QSLCGEDHIIRGTSIHVSNAVPKSEAAPSSH 305
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
R E+ Q+ I +G LP + + +DLR+YF FG +L V PK +GFGF+ F+
Sbjct: 131 RLENRQKCSDLIVLG-LPWKTSEQDLRQYFETFGEVLMAQVKKDPKTGQSKGFGFIRFSS 189
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ +
Sbjct: 190 YESQVRALSKRHLIDGRWCDV 210
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 77/186 (41%), Gaps = 49/186 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TF+ +SV+ ++ THEL G V A P+ + V R
Sbjct: 62 KDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRT---- 117
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 118 ----------------------------------------KKIFVGGLSAPTTLEDVKSY 137
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 138 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 197
Query: 178 DAGPSQ 183
P+
Sbjct: 198 VMLPAN 203
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + E LR YF R+G I + V P RGFGFVTF++ D+V ++
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQ 89
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ G++V A P
Sbjct: 90 GTHELDGKKVDPKVAFP 106
>gi|427797249|gb|JAA64076.1| Putative tar dna-binding protein 43, partial [Rhipicephalus
pulchellus]
Length = 521
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVA 153
G++S+ + +K+FVGR ++ +++DLR YFS++G + DV++PK R F FVTF + VA
Sbjct: 222 GQASE-LSRKVFVGRCTEDLSSDDLRDYFSKYGEVTDVFIPKP--FRAFAFVTFVDPDVA 278
Query: 154 DRVSRRSHEICGQQVAIDSATPLDDAGPSQN 184
+ H I G + + +A P +A PS +
Sbjct: 279 QSLCGEDHIIRGTSIHVSNAVPKSEAAPSSH 309
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
R E+ Q+ I +G LP + + +DLR+YF FG +L V PK +GFGF+ F+
Sbjct: 131 RLENRQKCSDLIVLG-LPWKTSEQDLRQYFETFGEVLMAQVKKDPKTGQSKGFGFIRFSS 189
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ +
Sbjct: 190 YESQVRALSKRHLIDGRWCDV 210
>gi|224102217|ref|XP_002312594.1| predicted protein [Populus trichocarpa]
gi|222852414|gb|EEE89961.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA ++ ++ DTH + G TV + + + P S GG
Sbjct: 39 KDKTTGRPRGFGFVVFADPSVLDRVLQDTHTIDGRTVKEQQTNARAGNLNPARNTSSGG- 97
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ T KKIFVG LP T + R+YF
Sbjct: 98 -------NIRT----------------------------KKIFVGGLPPTLTDDGFRQYF 122
Query: 123 SRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
FG + DV Y RGFGF++F E DRV +R+ H++ G+QV + A P
Sbjct: 123 EAFGLVTDVVIMYDQSTQRPRGFGFISFDSEDAVDRVLQRTFHDLNGKQVEVKRALP 179
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + E L YF+++G +L V K TG RGFGFV FA+ V DRV +
Sbjct: 7 KLFIGGISWETSEEKLGEYFTQYGDVLQTVVMKDKTTGRPRGFGFVVFADPSVLDRVLQD 66
Query: 160 SHEICGQQV 168
+H I G+ V
Sbjct: 67 THTIDGRTV 75
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ ++ RG GFI+F S D+V+ ++ T H+L G V V RA PKE
Sbjct: 136 DQSTQRPRGFGFISFDSEDAVDRVLQRTFHDLNGKQVEVKRALPKE 181
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ +A SV+ + + H L G TV V RA +E+
Sbjct: 47 RGFGFVVYADPASVDAALQEPHTLDGRTVDVKRALSREEQ-------------------- 86
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
AT+ A G G G++ KKIFVG LP T E+ R+YF FG + D
Sbjct: 87 QATKAVNPSAGRNAGGGGGGGGGGDAGGARTKKIFVGGLPSSLTDEEFRQYFQTFGAVTD 146
Query: 131 VYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
V V RGFGF+TF E DRV ++ H++ G+ V + A P +
Sbjct: 147 VVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRALPRE 197
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T E L+ +FS FG + V K TG RGFGFV +A+ D +
Sbjct: 7 KLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAALQE 66
Query: 160 SHEICGQQVAIDSA 173
H + G+ V + A
Sbjct: 67 PHTLDGRTVDVKRA 80
>gi|307199474|gb|EFN80087.1| TAR DNA-binding protein 43 [Harpegnathos saltator]
Length = 467
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+FVGR ++ TA+DLR YFS+FG + DV++PK R F FVTF + VA +
Sbjct: 188 QQVPCKVFVGRCTEDLTADDLRDYFSKFGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATP 175
H I G V + +A P
Sbjct: 246 GEDHIIKGVSVHVSNAAP 263
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G LP + T ++LR YF +FG +L V K ++G +GFGF+ F
Sbjct: 98 RMETKLRCTDLIVLG-LPWKTTEQNLREYFEQFGEVLMAQVKKDAKSGQSKGFGFIRFGS 156
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ +
Sbjct: 157 YESQLRCLAQRHMIDGRWCDV 177
>gi|255574661|ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532357|gb|EEF34155.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 456
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA E ++++ H + G V +A P+ED
Sbjct: 39 KDRATGRARGFGFVVFADPAVAERVVMEKHLIDGRNVEAKKAVPREDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N S++ + A T KKIFVG L T D ++YF
Sbjct: 87 NILNRNSSSSIHGSPSPART-------------------KKIFVGGLASTVTESDFKKYF 127
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P +
Sbjct: 128 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVKRAVPKEL 187
Query: 178 DAGPSQ 183
GP++
Sbjct: 188 SPGPTR 193
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR YF FG +++ + K TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVAERVVME 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFM 186
H I G+ V A P +D QN +
Sbjct: 67 KHLIDGRNVEAKKAVPRED----QNIL 89
>gi|331284184|ref|NP_001193585.1| RNA-binding protein Musashi homolog 2 [Bos taurus]
Length = 354
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 80/178 (44%), Gaps = 19/178 (10%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ HEL T+ A P+ +P G G
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRA--QPKGTFLTQG 107
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ A P + P R R KKIFVG L ED+++Y
Sbjct: 108 SNP------RLLHWQADSLPLSHQDP-----RHAMVTRT-KKIFVGGLSANTVVEDVKQY 155
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 156 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 213
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 46/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G +++ + PK R + R
Sbjct: 154 RDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKILILLQIDPK----RAIPR------ 203
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ + YF
Sbjct: 204 ---------------------------------DEQEKTSKIFVGGVSQETTDQEFKEYF 230
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 231 AQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLEIHGKPIEVKKAQP 286
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEV 151
++S + K+F+G L E T + LR YF++FG +++ V + + RGFGF+TF +
Sbjct: 114 KASAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK 173
Query: 152 VADRVSRRSHEICGQ-----QVAIDSATPLDD 178
+ V + H + G+ Q+ A P D+
Sbjct: 174 TVNIVMVKEHFLDGKILILLQIDPKRAIPRDE 205
>gi|429892774|gb|AGA18932.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 417
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 36 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 90
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 91 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 111
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 112 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 171
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 172 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 206
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 4 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 63
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 64 GPHTLDGRTIDPKPCNP 80
>gi|47229790|emb|CAG06986.1| unnamed protein product [Tetraodon nigroviridis]
Length = 468
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 9 AHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAY--- 65
+ +G GF+ FA D+ E ++ H + G K + P+ S + +
Sbjct: 174 SSKGFGFVRFAEYDAQEKVISQRHMIDGRWCDCKFPNSKVNMVMPIHIYSLNIFSSVSSV 233
Query: 66 ---NAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N IS + L L D P +K+FVGR ++ T +DLR++F
Sbjct: 234 FVGNCLISGVLFFHLLKQQPL-DEPLR-----------SRKVFVGRCTEDMTTDDLRQFF 281
Query: 123 SRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++G + DV++PK R F FVTFA++ VA + I G V I +A P
Sbjct: 282 MQYGEVTDVFIPK--PFRAFAFVTFADDQVAQSLCGEDLIIKGVSVHISNAEP 332
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 32 RDSSSGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + Q+ T ++ R YF
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQDTTDQEFREYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 104 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQP 159
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + LR YFS+FG +++ V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HFLDGKIIDPKRAIPRDE 78
>gi|429892780|gb|AGA18935.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|429892776|gb|AGA18933.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|158296255|ref|XP_001688946.1| AGAP006656-PA [Anopheles gambiae str. PEST]
gi|157016423|gb|EDO63952.1| AGAP006656-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 90/221 (40%), Gaps = 65/221 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF SV+ ++ THEL G + A P+
Sbjct: 19 KDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVAFPRR------------- 65
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L T ED++ Y
Sbjct: 66 -----AHPKMVTR--------------------------TKKIFVGGLSAPTTLEDVKSY 94
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG I D + K+T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 95 FEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 154
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG 218
P+ N A+T RT GR G+ DF W G
Sbjct: 155 VMLPA-----NLAKT--------RTAGR--GTYDF-MWSLG 179
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSA 173
LR YFS+FG I +V V P RGFGF+TF + D+V + +HE+ G+++ A
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVA 61
Query: 174 TP 175
P
Sbjct: 62 FP 63
>gi|429892772|gb|AGA18931.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 39 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 94 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 114
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 115 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 174
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 175 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 209
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 7 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 67 GPHTLDGRTIDPKPCNP 83
>gi|429892784|gb|AGA18937.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 39 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 94 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 114
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 115 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 174
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 175 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 209
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 7 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 67 GPHTLDGRTIDPKPCNP 83
>gi|429892786|gb|AGA18938.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 418
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 37 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 91
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 92 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 112
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 113 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 172
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 173 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 207
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FV L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 5 KLFVYGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 64
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 65 GPHTLDGRTIDPKPCNP 81
>gi|17136728|ref|NP_476869.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|24582366|ref|NP_723228.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|24582368|ref|NP_723229.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|281364530|ref|NP_001162897.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|281364532|ref|NP_001162898.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|386769237|ref|NP_001245917.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|386769239|ref|NP_001245918.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|386769241|ref|NP_001245919.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
gi|76803817|sp|P48809.2|RB27C_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C;
Short=Hrb27-C; AltName: Full=HRP48.1; AltName:
Full=hnRNP 48
gi|7297190|gb|AAF52456.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|7297191|gb|AAF52457.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|17862734|gb|AAL39844.1| LD46853p [Drosophila melanogaster]
gi|21711665|gb|AAM75023.1| GH26816p [Drosophila melanogaster]
gi|22945819|gb|AAN10605.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|66804007|gb|AAY56657.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
gi|272406922|gb|ACZ94188.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|272406923|gb|ACZ94189.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|383291369|gb|AFH03591.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|383291370|gb|AFH03592.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|383291371|gb|AFH03593.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
Length = 421
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 153 RDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 199
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ + YF
Sbjct: 200 -----------------------------------QEKTSKIFVGGVSQETTDQEFKEYF 224
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 225 AQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLEIHGKPIEVKKAQP 280
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEV 151
++S + K+F+G L E T + LR YF++FG +++ V + + RGFGF+TF +
Sbjct: 113 KASAKEDGKMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAK 172
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDD 178
+ V + H + G+ + A P D+
Sbjct: 173 TVNIVMVKEHFLDGKIIDPKRAIPRDE 199
>gi|429892778|gb|AGA18934.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|429892782|gb|AGA18936.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 39 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 94 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 114
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 115 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 174
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 175 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 209
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FV L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 7 KLFVDGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 66
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 67 GPHTLDGRTIDPKPCNP 83
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 51/199 (25%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TFA++ + ++ H + V V R P+ED
Sbjct: 81 RGFGFVTFANSAVADEVLAQEHTIDHRVVEVKRTVPRED--------------------- 119
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
D G F KKIFVG + Q T ++LR YFS +G +++
Sbjct: 120 -------------VDVTGVF---------KTKKIFVGGIAQFFTDDELREYFSPYGNVIE 157
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATPLDDAGPSQNF 185
+ + TG RGFGFVTF +E ++V + HEI G+QV I A P ++
Sbjct: 158 CQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSG---VDY 214
Query: 186 MMNAAETFGGYGGPMRTYG 204
+ +++GG+G M +G
Sbjct: 215 CNTSRKSYGGFGNEMDGHG 233
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + E YFS++G + D + K +G RGFGFVTFA VAD V +
Sbjct: 41 KLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQ 100
Query: 160 SHEICGQQVAIDSATPLDDA 179
H I + V + P +D
Sbjct: 101 EHTIDHRVVEVKRTVPREDV 120
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMV--DTHELGGSTVVVDRATPKED--DFRPVGRMSH 59
D + RG GF+TF DSVE + HE+GG V + RA PK D+ R S+
Sbjct: 163 DHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSGVDYCNTSRKSY 222
Query: 60 GGYG 63
GG+G
Sbjct: 223 GGFG 226
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 77/194 (39%), Gaps = 56/194 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+E+ R
Sbjct: 120 RDSATGRSRGFGFLTFRDPKCVNIVMVKEHYLDGKIIDPKRAIPREEQER---------- 169
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT ED +F
Sbjct: 170 --------------------------------------TSKIFVGGVSQEATEEDFTAFF 191
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPL--- 176
+FGR++D + + K TG RGFGFVTF + D + +I G+ + + A P
Sbjct: 192 KQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLKGPLQILGKPIEVKRAQPRGNM 251
Query: 177 --DDAGPSQNFMMN 188
DD G ++ F N
Sbjct: 252 RDDDGGDNKKFGRN 265
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSR 158
+K+F+G L E T + L+ YF++FG + + V + + RGFGF+TF + + V
Sbjct: 87 RKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNIVMV 146
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H + G+ + A P ++
Sbjct: 147 KEHYLDGKIIDPKRAIPREE 166
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 32 RDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQER---------- 81
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT +D +++F
Sbjct: 82 --------------------------------------TSKIFVGGVSQEATEQDFKQFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K +G RGFGFVTF E + EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 43 RDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQERT--------- 93
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + Q+A +D +++F
Sbjct: 94 ---------------------------------------SKIFVGGVSQDANEQDFKKFF 114
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 115 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQP 170
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 71 EHYLDGKIIDPKRAIPRDE 89
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 153 RGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQER------------------ 194
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
KIFVG + Q+A +D +++F +FGR++D
Sbjct: 195 ------------------------------TSKIFVGGVSQDANEQDFKKFFMQFGRVVD 224
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 225 ATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQP 272
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 172
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 173 EHYLDGKIIDPKRAIPRDE 191
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V+ ++ D H + G V + R P+ +
Sbjct: 84 KDRATGNPRGFGFVTYADPSVVDKVIKDKHFIDGKMVEIKRTIPRGN------------- 130
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
AA P KKIFVG +P T ++ + YF
Sbjct: 131 -------------AATKGPKT------------------KKIFVGGIPTSITEDEFKDYF 159
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTF-AEEVVADRVSR-RSHEICGQQVAIDSATP 175
S+FG++L+ + + G RGFGFVTF +EE V + +S + E+ G+QV I A P
Sbjct: 160 SKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKKAEP 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E ++ +YFS++G + D + K TG+ RGFGFVT+A+ V D+V +
Sbjct: 52 KIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIKD 111
Query: 160 SHEICGQQVAIDSATPLDDA 179
H I G+ V I P +A
Sbjct: 112 KHFIDGKMVEIKRTIPRGNA 131
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMV--DTHELGGSTVVVDRATPKE 48
+D G+ RG GF+TF S ++VE ++ ELGG V + +A PK+
Sbjct: 172 QDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKKAEPKK 219
>gi|327303046|ref|XP_003236215.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
gi|326461557|gb|EGD87010.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
Length = 489
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 32 RDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQER---------- 81
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT ++ +++F
Sbjct: 82 --------------------------------------TSKIFVGGVSQEATEQEFKQFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSRR 159
+F+G L E T + L+ YFS+FG + + V R G RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTV-MRDGASGRSRGFGFLTFTDPKTVNTVMVK 59
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ DTH + G V + R PK
Sbjct: 52 KDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPK--------------- 96
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G G+S KKIFVG +P T ++ + +F
Sbjct: 97 -----------------------------GSGQSKDFKTKKIFVGGVPSTVTEDEFKNFF 127
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
S++G++++ + + RGFGF+ F +EEVV + +S+ + ++ G QV I A P
Sbjct: 128 SKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEPKK 187
Query: 178 DAGP 181
+ P
Sbjct: 188 ASNP 191
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + K TG RGFGF+T+A+ V DRV
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 135 RDGASGRSRGFGFLTFKDARTVNVVMVKEHYLDGKIIDPKRAIPRDE------------- 181
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QEA+ D + YF
Sbjct: 182 -----------------------------------QERTSKIFVGGVSQEASELDFKEYF 206
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 207 MQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACINIPLEILGKPIEVKKAQP 262
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSR 158
K+F+G L E T + L+ YFS+FG +++ V R G RGFGF+TF + + V
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVVECTV-MRDGASGRSRGFGFLTFKDARTVNVVMV 161
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H + G+ + A P D+
Sbjct: 162 KEHYLDGKIIDPKRAIPRDE 181
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 144 RGFGFLTFKDPKNVNTVMVKEHSLDGKLIDPKRAIPRDEQERTA---------------- 187
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
KIFVG + QEAT D + +F +FGR+LD
Sbjct: 188 --------------------------------KIFVGGVSQEATEADFKDFFMKFGRVLD 215
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E+ +R I G+ + + A P
Sbjct: 216 ATLMMDKDTGRPRGFGFVTFDSELAVERTLEGPLAILGKPIEVKRAQP 263
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E L++YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 104 KMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVK 163
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 164 EHSLDGKLIDPKRAIPRDE 182
>gi|302509632|ref|XP_003016776.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
gi|291180346|gb|EFE36131.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
Length = 489
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 32 RDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQER---------- 81
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT ++ +++F
Sbjct: 82 --------------------------------------TSKIFVGGVSQEATEQEFKQFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSRR 159
+F+G L E T + L+ YFS+FG + + V R G RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTV-MRDGASGRSRGFGFLTFTDPKTVNTVMVK 59
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 60 EHYLDGKIIDPKRAIPRDE 78
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 32 RDGATGRSRGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQER---------- 81
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + Q+A +D +++F
Sbjct: 82 --------------------------------------TSKIFVGGVSQDANEQDFKKFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 104 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 50/184 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 88 KDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKN------------- 134
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R + + R KKIFVG + Q+ ++E+++ Y
Sbjct: 135 -------------------------------RAKQANRT-KKIFVGGVSQDTSSEEVKAY 162
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F++FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 163 FNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 222
Query: 178 DAGP 181
P
Sbjct: 223 AVQP 226
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF FG + DV + P RGFGF+TFAE D+V +
Sbjct: 56 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 115
Query: 160 S-HEICGQQVAIDSATPLDDA 179
H + G+++ ATP + A
Sbjct: 116 PIHTLDGKKIDPKHATPKNRA 136
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 174 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 222
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 239 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 287
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 288 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 313
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 314 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 373
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 374 AVTPAAQLL 382
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 207 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 266
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 267 PIHTLDGKKIDPKHATP 283
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 325 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 373
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 208 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 256
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 257 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 282
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 283 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 342
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 343 AVTPAAQLL 351
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 236 PIHTLDGKKIDPKHATP 252
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 294 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 342
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 180 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 228
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 229 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 254
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 255 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 314
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 315 AVTPAAQLL 323
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 148 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 207
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 208 PIHTLDGKKIDPKHATP 224
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 266 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 314
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 220 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 268
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 269 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 294
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 295 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 354
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 355 AVTPAAQLL 363
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 188 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 247
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 248 PIHTLDGKKIDPKHATP 264
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 306 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 354
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 208 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 256
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 257 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 282
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 283 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 342
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 343 AVTPAAQLL 351
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 236 PIHTLDGKKIDPKHATP 252
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 294 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 342
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 36/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFI FA + ++ + H + G V RA P++D P
Sbjct: 39 KDRTTGRARGFGFIVFADPSVADRVIKEKHNIDGRMVEAKRAIPRDDQNIP--------- 89
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ S ++ + + G DH +KIFVG L T D + YF
Sbjct: 90 ----SRNSVSSMHGSPGP----DHT--------------RKIFVGGLASTVTESDFKNYF 127
Query: 123 SRFGRILD---VYVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I+D +Y RGFGF+T+ + D+V ++ HE+ G+ V + A P +
Sbjct: 128 DQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKTFHELNGKMVEVKRAVPKEL 187
Query: 178 DAGPSQ 183
GP++
Sbjct: 188 SPGPTR 193
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + + E L+ YF FG +++ + K TG RGFGF+ FA+ VADRV +
Sbjct: 7 KLFVGGISWDTNEERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIKE 66
Query: 160 SHEICGQQVAIDSATPLDDAG-PSQN 184
H I G+ V A P DD PS+N
Sbjct: 67 KHNIDGRMVEAKRAIPRDDQNIPSRN 92
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ FA +V+ + D H L G TV V RA +E+
Sbjct: 47 RGFGFVVFADPAAVDRALQDPHTLDGRTVDVKRALSREEQ-------------------- 86
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
A++ A G G ++S KKIFVG LP T + R+YF FG + D
Sbjct: 87 QASKAANPSGGRNSGGGGGGGGGSDASGARTKKIFVGGLPSTLTEDGFRQYFETFGIVTD 146
Query: 131 VYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
V V RGFGF+TF E DRV +++ H++ G+ V + A P
Sbjct: 147 VVVMYDQNTQRPRGFGFITFDSEDAVDRVLQKTFHDLGGKLVEVKRALP 195
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T E L +FS +G + V K TG RGFGFV FA+ DR +
Sbjct: 7 KLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRALQD 66
Query: 160 SHEICGQQVAIDSA 173
H + G+ V + A
Sbjct: 67 PHTLDGRTVDVKRA 80
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 236 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 284
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 285 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 310
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 311 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 371 AVTPAAQLL 379
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 264 PIHTLDGKKIDPKHATP 280
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 322 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 207 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 255
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 256 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 281
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 282 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 341
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 342 AVTPAAQLL 350
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 234
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 235 PIHTLDGKKIDPKHATP 251
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 293 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 341
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 236 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 284
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 285 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 310
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 311 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 371 AVTPAAQLL 379
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 264 PIHTLDGKKIDPKHATP 280
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 322 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
>gi|11042|emb|CAA44505.1| hrp48.1 [Drosophila melanogaster]
Length = 385
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F+R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ DTH + G V + R PK
Sbjct: 52 KDRYTGQPRGFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPK--------------- 96
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G G+S KKIFVG +P T ++ + +F
Sbjct: 97 -----------------------------GSGQSKDFKTKKIFVGGVPSTVTEDEFKNFF 127
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
S++G++++ + + RGFGF+ F +EEVV + +S+ + ++ G QV I A P
Sbjct: 128 SKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEIKKAEPKK 187
Query: 178 DAGP 181
+ P
Sbjct: 188 ASNP 191
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + K TG RGFGF+T+A+ V DRV
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 236 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 284
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 285 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 310
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 311 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 371 AVTPAAQLL 379
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 264 PIHTLDGKKIDPKHATP 280
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 322 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 152 RDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 198
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ + YF
Sbjct: 199 -----------------------------------QEKTSKIFVGGVSQETTDQEFKEYF 223
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 224 AQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGVDACINVPLEIHGKPIEVKKAQP 279
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 85 DHPGSFYGR-GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HR 140
D P YG ++S + K+F+G L E T + LR YFS+FG +++ V + + R
Sbjct: 101 DAPTPPYGTVHKASAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSR 160
Query: 141 GFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
GFGF+TF + + V + H + G+ + A P D+
Sbjct: 161 GFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE 198
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 169 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 217
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 218 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 243
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 244 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 303
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 304 AVTPAAQLL 312
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 196
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 197 PIHTLDGKKIDPKHATP 213
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 255 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 303
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 143 RGFGFLTFRDPKTVNTVMVKEHSLDGKLIDPKRAIPRDEQERTA---------------- 186
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
KIFVG + Q+AT +D +F +FGR+LD
Sbjct: 187 --------------------------------KIFVGGVSQDATEQDFEAFFQKFGRVLD 214
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E+ +R I G+ + + A P
Sbjct: 215 ATLMMDKDTGRPRGFGFVTFDNEMAVERTLEGPLAILGKPIEVKRAQP 262
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMVK 162
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 163 EHSLDGKLIDPKRAIPRDE 181
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 36/189 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F+ E ++ H + G V +A P++D
Sbjct: 39 KDRATGRARGFGFLVFSDPIVAERVVFLRHVIDGKLVEAKKAVPRDD------------- 85
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ ++ + + G+P G S KKIFVG L T + ++YF
Sbjct: 86 ---HVVLNKSYNTSLQGSP----------GPANS-----KKIFVGGLASSVTEAEFKKYF 127
Query: 123 SRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
++FG I DV V RT RGFGF++F E D+V +R+ HE+ G+ V + A P +
Sbjct: 128 AQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVDKVLQRTFHELNGKMVEVKLAVPKEM 187
Query: 179 A-GPSQNFM 186
A P +N M
Sbjct: 188 ALNPIRNQM 196
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T + LR YF FG +L+ + K TG RGFGF+ F++ +VA+RV
Sbjct: 7 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAERVVFL 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 67 RHVIDGKLVEAKKAVPRDD 85
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPV-GRMSHGG 61
D ++ RG GFI+F S D+V+ ++ T HEL G V V A PKE P+ +M+
Sbjct: 141 DHRTQRPRGFGFISFESEDAVDKVLQRTFHELNGKMVEVKLAVPKEMALNPIRNQMNVNS 200
Query: 62 YGA 64
+G+
Sbjct: 201 FGS 203
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP
Sbjct: 237 KDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 285
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 286 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 311
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 312 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 371
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 372 AVTPAAQLL 380
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E ++V +
Sbjct: 205 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 264
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 265 PIHTLDGKKIDPKHATP 281
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 323 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 371
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 80/186 (43%), Gaps = 37/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFI FA + ++ + H + G V RA P+ D VGR S
Sbjct: 39 KDRTTGRGRGFGFIVFADPSVADRVIREKHNIDGRMVEAKRAVPRNDQ-NIVGRTS---- 93
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G+ + PG +KIFVG L T + + YF
Sbjct: 94 ----------------GSINVSPGPGRT-----------RKIFVGGLASTVTESEFKNYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ +EE V + + HE+ G+ V + A P +
Sbjct: 127 DQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQ 183
GPS+
Sbjct: 187 SPGPSR 192
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + + + L+ YF+ +G +++ + K TG RGFGF+ FA+ VADRV R
Sbjct: 7 KLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P +D QN + + + GP RT G L
Sbjct: 67 KHNIDGRMVEAKRAVPRND----QNIVGRTSGSINVSPGPGRTRKIFVGGL 113
>gi|296083709|emb|CBI23698.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 91/209 (43%), Gaps = 37/209 (17%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA ++ ++ + H + G TV RA +E+ + +
Sbjct: 39 RDKATGRPRGFGFVVFADPSILDRVLQEKHIIDGRTVEAKRALSREE------QQTSSRA 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G +N S G KKIFVG LP + E R+YF
Sbjct: 93 GNFN----------------------SARNSGGGGNVKTKKIFVGGLPPTLSEEGFRQYF 130
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
FG + DV V RGFGFV+F E DRV ++ H++ G+QV + A P D
Sbjct: 131 EAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYKTFHDLNGKQVEVKRALP-KD 189
Query: 179 AGPSQNFMMNAAETFGGYGGPMRTY-GRM 206
A P + + +G GG TY GRM
Sbjct: 190 ANPGGG---SRYQGYGASGGNPTTYDGRM 215
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + L+ YF +G + V K TG RGFGFV FA+ + DRV +
Sbjct: 7 KLFIGGISWETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A ++ S NF N+A GG GG ++T G L
Sbjct: 67 KHIIDGRTVEAKRALSREEQQTSSRAGNF--NSARNSGG-GGNVKTKKIFVGGL 117
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|449688875|ref|XP_002157235.2| PREDICTED: TAR DNA-binding protein 43-like, partial [Hydra
magnipapillata]
Length = 271
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVV 152
+ + ++R+ K+F+GRLP + + +DLR+YFS +G + DVY+P T RGFGFVT+A+
Sbjct: 104 KKKENKRV--KLFIGRLPADTSEDDLRKYFSDYGELTDVYLP--TPFRGFGFVTYAQADD 159
Query: 153 ADRVSRRSHEICGQQVAIDSATP 175
A V +SH + G ++ + A P
Sbjct: 160 AQIVLHKSHSLKGSRMNVTIAEP 182
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS 160
+ V LP +AT +DL+ YF +FG + + P RGF F+ F E A +V +
Sbjct: 31 LIVLGLPYKATNQDLKDYFLKFGELAMYEIKIDPLTKESRGFAFIRFKNEAAAQKVLKVD 90
Query: 161 HEICGQQVAI 170
H I G++ +
Sbjct: 91 HSILGRRCEV 100
>gi|209875917|ref|XP_002139401.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555007|gb|EEA05052.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 395
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GFITFAS +SV+ ++ + G + RA P+ + GG N S
Sbjct: 55 RGFGFITFASEESVDAVLASPQIVDGKEIDCKRAVPRGAIQT---NETEGGDPGDNKVTS 111
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRI-- 128
+ + + GA T + G+F KIFVG LPQ T E LR +F ++G I
Sbjct: 112 SVS---SSGAVTNNNSSGTFNA---------TKIFVGGLPQSCTDEKLREHFGKYGMIKN 159
Query: 129 LDVYVPKRTG-HRGFGFVTFAEEVVADRVSRR--SHEICGQQVAIDSATP 175
L V V + T HRGFGFV + + V R H+I + V A P
Sbjct: 160 LSVMVDRDTNRHRGFGFVEYESPESVEEVMRHYYDHQIDNKWVECKKALP 209
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEV 151
+S + KIF G L T LR +FS +G I+D V K TG RGFGF+TFA E
Sbjct: 7 QSGPTVPAKIFCGGLSDVTTNTSLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEE 66
Query: 152 VADRVSRRSHEICGQQVAIDSATP 175
D V + G+++ A P
Sbjct: 67 SVDAVLASPQIVDGKEIDCKRAVP 90
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA A SV+ ++ V H L G + ATPK
Sbjct: 56 KDPLTQRSRGFGFITFAEASSVDRVLAVPAHTLDGKKIDPKHATPKNK------------ 103
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G+ S + KK+FVG + Q+ +A++++ Y
Sbjct: 104 ------------------------------GKATPSSKT-KKVFVGGVSQDTSADEVKAY 132
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F++FGR+ + + + HRGFGFVTF E V DR+ H I ++V A P
Sbjct: 133 FNQFGRVEEAVMLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKAQP 190
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
GR + K+FVG L + +A+ LR YF ++G I+DV V P RGFGF+TFA
Sbjct: 13 GRSTPTDLPHNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFA 72
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
E DRV + +H + G+++ ATP
Sbjct: 73 EASSVDRVLAVPAHTLDGKKIDPKHATP 100
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF S D V+ + + H + V +A PKE
Sbjct: 144 MLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKAQPKE 192
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 52/193 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSH-G 60
K+ + RG GF+TFA ++VE + + H L G T+ PK + R + + G
Sbjct: 52 KNNETGRSRGFGFVTFADPENVERALENGPHTLDGRTI-----DPKPCNPRSLHKPKRTG 106
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GY K+F+G LP T DLR
Sbjct: 107 GY---------------------------------------PKVFLGGLPPNITETDLRS 127
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPL 176
+FSR+G +++V Y ++ RGFGF++F E +R + I G+QV I A P
Sbjct: 128 FFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATAEHFVNISGKQVEIKKAEPR 187
Query: 177 DDAGPSQNFMMNA 189
D +G N MNA
Sbjct: 188 DGSG--NNNSMNA 198
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE-EVVADRVSR 158
K+FVG L E T E+L+RYF R+G ++D V K TG RGFGFVTFA+ E V +
Sbjct: 20 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 79
Query: 159 RSHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 80 GPHTLDGRTIDPKPCNP 96
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 73/178 (41%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA A SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V ++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGR 56
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P R
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 52/200 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYG 197
+G QN N + G YG
Sbjct: 176 GSG-GQN--SNNSTVGGAYG 192
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 S-HEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 49/215 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDF 212
+G + +G G +G + ++
Sbjct: 176 GSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINM 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|194752716|ref|XP_001958665.1| GF12452 [Drosophila ananassae]
gi|190619963|gb|EDV35487.1| GF12452 [Drosophila ananassae]
Length = 529
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAG---PSQNFMMNAAETFG 194
H I G V + +A P + +QN+ N+ +FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRNSQAQNYNYNSGNSFG 285
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G LP + + + LR YF +G +L + K ++G +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTSEDSLREYFESYGEVLMAQIKKDNKSGQSKGFGFVRFGS 157
Query: 150 EVVADRVSRRSHEICGQQVAI 170
RV H I G+ +
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEV 178
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 50/203 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMV-DTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GFITF SV+ ++ + HEL G + A PK+ + + +
Sbjct: 63 RDPATKRARGFGFITFTDPASVDKVLAQELHELDGKKIDPKVAFPKKAQSKMIIKT---- 118
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KK+F+G L +T ED++ Y
Sbjct: 119 ----------------------------------------KKVFIGGLSATSTLEDMKNY 138
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F ++G++ D + K T HRGFGF+TF + V+D+V HEI G+ V A P +
Sbjct: 139 FEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKE 198
Query: 178 DAGPSQNFMMNAAETFGGYG-GP 199
P Q AA YG GP
Sbjct: 199 VMLPVQLNKSRAAAARSLYGLGP 221
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEE 150
G SS GK +F+G L + TAE LR YF +FG + + V P RGFGF+TF +
Sbjct: 23 GTSSNDPGK-MFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDP 81
Query: 151 VVADRV-SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP-----MRTYG 204
D+V ++ HE+ G++ ID S+ + GG M+ Y
Sbjct: 82 ASVDKVLAQELHELDGKK--IDPKVAFPKKAQSKMIIKTKKVFIGGLSATSTLEDMKNYF 139
Query: 205 RMYGSLD 211
YG ++
Sbjct: 140 EQYGKVE 146
>gi|328783809|ref|XP_392590.4| PREDICTED: TAR DNA-binding protein 43-like [Apis mellifera]
gi|340729558|ref|XP_003403067.1| PREDICTED: TAR DNA-binding protein 43-like [Bombus terrestris]
gi|350411720|ref|XP_003489432.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Bombus
impatiens]
gi|350411723|ref|XP_003489433.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Bombus
impatiens]
gi|380018789|ref|XP_003693304.1| PREDICTED: TAR DNA-binding protein 43-like [Apis florea]
gi|383859208|ref|XP_003705088.1| PREDICTED: TAR DNA-binding protein 43-like [Megachile rotundata]
Length = 467
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+FVGR ++ TA+DLR YFS++G + DV++PK R F FVTF + VA +
Sbjct: 188 QQVPCKVFVGRCTEDLTADDLRDYFSKYGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATP 175
H I G V + +A P
Sbjct: 246 GEDHIIKGVSVHVSNAAP 263
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G LP + T ++LR YF FG +L V K ++G +GFGF+ F
Sbjct: 98 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDAKSGQSKGFGFIRFGS 156
Query: 150 EVVADRVSRRSHEICGQQVAI 170
R + H I G+ +
Sbjct: 157 YESQLRCLAQRHMIDGRWCDV 177
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 80/186 (43%), Gaps = 37/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F+ E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFSDPAVAEIVIKEKHNIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
L + GS +G + +KIFVG L T D ++YF
Sbjct: 87 ------------------NILSRNSGSIHGSPGPGRT--RKIFVGGLASTVTESDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQ 183
GPS+
Sbjct: 187 SPGPSR 192
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YF +G +++ + K TG RGFGFV F++ VA+ V +
Sbjct: 7 KLFIGGISWDTNEERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVIKE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D ++ RG GFIT+ S ++V+ +++ T HEL G V V RA PKE P R GGY
Sbjct: 140 DHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPS-RTPLGGY 198
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 49/170 (28%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF+ ++ ++ D H + G TV V R PKE +S
Sbjct: 3 RGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKE--------------------LS 42
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
+ D P + KKIFVG +P T + L+ +FS +G++++
Sbjct: 43 SK------------DGPKT------------KKIFVGGIPPSLTEDKLKEHFSSYGKVVE 78
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATP 175
+ + TG RGFGFVTF E +RV R H++ G+QV I A P
Sbjct: 79 HQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEP 128
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKED---DFRPVGRMS 58
D + RG GF+TF S D+VE +M + H+LGG V + +A PK+ D GR S
Sbjct: 84 DHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRHS 143
Query: 59 HGG 61
GG
Sbjct: 144 RGG 146
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+E+
Sbjct: 143 RGFGFLTFRDPKTVNIVMVKEHYLDGKIIDPKRAIPREE--------------------- 181
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + QEAT +D + +F +FGR++D
Sbjct: 182 ---------------------------QEKTAKIFVGGVSQEATEQDFKSFFEQFGRVID 214
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E D + I G+ + + A P
Sbjct: 215 ATLMMDKDTGRPRGFGFVTFDGEAAVDACLQGPLAILGKPIEVKRAQP 262
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 103 KMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVK 162
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P ++
Sbjct: 163 EHYLDGKIIDPKRAIPREE 181
>gi|195382465|ref|XP_002049950.1| GJ21868 [Drosophila virilis]
gi|194144747|gb|EDW61143.1| GJ21868 [Drosophila virilis]
Length = 539
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + + QN+ N+ FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRTHQGQNYNYNSGNNFG 285
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 195 RGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQER------------------ 236
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
KIFVG + QEAT +D +++F +FGR++D
Sbjct: 237 ------------------------------TSKIFVGGVSQEATEQDFKQFFMQFGRVVD 266
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K +G RGFGFVTF E + EI G+ + + A P
Sbjct: 267 ATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQP 314
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 215 EHYLDGKIIDPKRAIPRDE 233
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 49/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAG 180
+G
Sbjct: 176 GSG 178
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 S-HEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|405960878|gb|EKC26752.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 420
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRR 159
+ +K+F+ R ++ TA+DL +YFS+FG + DV++PK R F FVTF + +A +
Sbjct: 210 MNRKVFIARCSEDITADDLHKYFSKFGEVSDVFIPKP--FRAFAFVTFMDAEIAQSLCGE 267
Query: 160 SHEICGQQVAIDSATP 175
H I G V + SATP
Sbjct: 268 DHIIKGTSVHVSSATP 283
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 94 GESSQRIGKK----IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVT 146
G ++R+ KK + V LP ++T ED+R+YFS+FG +L V V + +TG +GFGFV
Sbjct: 114 GSKTRRMDKKRCVDLIVLGLPWKSTEEDMRKYFSQFGELLLVQVKRDGKTGQSKGFGFVR 173
Query: 147 FAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 184
F + + + H I G+ ++ + +GP N
Sbjct: 174 FGDFEAQSKCLAQRHMIDGRWCEVNIPASNEQSGPPMN 211
>gi|399218335|emb|CCF75222.1| unnamed protein product [Babesia microti strain RI]
Length = 436
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 39/170 (22%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF S D++E ++ + G V +A P+E N+
Sbjct: 77 RGFGFVTFVSHDALEAVLASKQIVDGKEVDCKKACPRE---------------VMNSNNG 121
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
A + A +G KIFVG LP + T E+ R YF +FG +L+
Sbjct: 122 ALPKAAQVGV------------------FRTDKIFVGGLP-DLTNEEFREYFEKFGTVLE 162
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRR--SHEICGQQVAIDSATP 175
+ V K T RGFGF+TF V + V RR H + G+ V + ATP
Sbjct: 163 ATLMVDKNTNKPRGFGFITFESPSVVNEVIRRYNEHTLKGKWVEVKKATP 212
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 90 FYGRGESSQRIGK--KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGF 144
+G + ++GK IFVG L Q T E LR++F +G + D V V +G RGFGF
Sbjct: 22 LWGDQIMASKVGKICHIFVGGLSQVTTQESLRQHFETYGEMTDCVVMVEANSGRSRGFGF 81
Query: 145 VTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAET 192
VTF + V + G++V A P + + + AA+
Sbjct: 82 VTFVSHDALEAVLASKQIVDGKEVDCKKACPREVMNSNNGALPKAAQV 129
>gi|270011960|gb|EFA08408.1| hypothetical protein TcasGA2_TC006055 [Tribolium castaneum]
Length = 479
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+F+GR +E TA+DLR YF ++G + DV++PK R F FVTF + VA +
Sbjct: 190 QQVPCKVFIGRCTEELTADDLREYFGKYGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 247
Query: 158 RRSHEICGQQVAIDSATP 175
H I G V + +A P
Sbjct: 248 GEDHIIKGVSVHVSNAAP 265
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
R E+ R I +G LP + T ++LR YF FG +L V PK +GFGF+ FA
Sbjct: 100 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDPKTGQSKGFGFIRFAS 158
Query: 150 EVVADRVSRRSHEICGQQVAI 170
RV + H I G+ +
Sbjct: 159 YESQMRVLAQRHMIDGRWCDV 179
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V++++ DTH + G V + R PK
Sbjct: 52 KDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPK--------------- 96
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G G+S KKIFVG LP T ++ + +F
Sbjct: 97 -----------------------------GSGQSKDFKTKKIFVGGLPSTVTEDEFKDFF 127
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATPLD 177
S++G++ + + + RGFGF+ F E V D + + ++ G QV I A P
Sbjct: 128 SKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPKK 187
Query: 178 DAGP 181
+ P
Sbjct: 188 ASNP 191
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + K TG RGFGFVT+A+ V D V
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 37/186 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F+ E ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFSDPAIAEIVIKEKHNIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ + +++ PG GR +KIFVG L T D ++YF
Sbjct: 87 -----------NILSRNSGSIHGSPGP--GRT-------RKIFVGGLASTVTESDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 186
Query: 178 DAGPSQ 183
GPS+
Sbjct: 187 SPGPSR 192
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YFS +G +++ + K TG RGFGFV F++ +A+ V +
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAIAEIVIKE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNILSRNSGSIHGSPGPGRTRKIFVGGL 113
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D ++ RG GFIT+ S ++V+ +++ T HEL G V V RA PKE P R GGY
Sbjct: 140 DHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPS-RTPLGGY 198
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +VE ++ V H L G + ATPK RP R ++
Sbjct: 243 KDPVTQRSRGFGFITFQDPCTVEKVLKVPIHTLDGKKIDPKHATPKN---RP--RQANKT 297
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + Q+ +AE+++ Y
Sbjct: 298 ----------------------------------------KKIFVGGVSQDTSAEEVKAY 317
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F++FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 318 FAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 377
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 378 SVTPAAQLL 386
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF + ++V +
Sbjct: 211 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVLKV 270
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 271 PIHTLDGKKIDPKHATP 287
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKED 49
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 329 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKES 378
>gi|195122786|ref|XP_002005892.1| GI20724 [Drosophila mojavensis]
gi|193910960|gb|EDW09827.1| GI20724 [Drosophila mojavensis]
Length = 536
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + + QN+ N+ FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRTHQGQNYNYNSGNNFG 285
>gi|297744195|emb|CBI37165.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 45/189 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDF--RP----VGR 56
+D+ + RG GF+ FA ++ ++ + H + G TV RA +E+ RP GR
Sbjct: 39 RDKTTGRPRGFGFVVFADPSVLDAVLQEKHTIDGRTVEAKRALSREEQHTSRPGNSNTGR 98
Query: 57 MSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAE 116
S G G + KKIFVG LP T E
Sbjct: 99 SSSGMGGNFKT----------------------------------KKIFVGGLPSTLTEE 124
Query: 117 DLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDS 172
R+YF +G + DV V RGFGF++F E DRV ++ H++ G+ V +
Sbjct: 125 GFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEVKR 184
Query: 173 ATPLDDAGP 181
A P DA P
Sbjct: 185 ALP-KDANP 192
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG +P + T E L+ YF+++G + + K TG RGFGFV FA+ V D V +
Sbjct: 7 KLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A ++ S+ N + G GG +T G L
Sbjct: 67 KHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGL 117
>gi|194885691|ref|XP_001976478.1| GG19989 [Drosophila erecta]
gi|190659665|gb|EDV56878.1| GG19989 [Drosophila erecta]
Length = 533
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAG---PSQNFMMNAAETFG 194
H I G V + +A P + +Q++ N+A +FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRNQQAQSYNYNSANSFG 285
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAE 149
R E+ R I +G LP + T E LR YF +G +L + K T +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
Query: 150 EVVADRVSRRSHEICGQQVAI 170
RV H I G+ +
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEV 178
>gi|410899384|ref|XP_003963177.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Takifugu
rubripes]
Length = 310
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+LR+YF ++G + DV++PK R F FVTFA+ VA
Sbjct: 204 RKVFVGRCTEDMTAEELRQYFMQYGEVTDVFIPK--PFRAFAFVTFADHQVA-------Q 254
Query: 162 EICGQQVAIDSATP-LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
+CG+ + I + + +A P N N + F + G M T M+
Sbjct: 255 ALCGEDLIIKGVSVHISNAEPKHN---NIHQAFPNFPGGMATLAAMFN 299
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F +
Sbjct: 118 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQI 176
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
+V + H I G+ D P A P + T +R Y YG +
Sbjct: 177 KVIAQRHLIDGRWC--DCKLPNSKACPDDRKVFVGRCTEDMTAEELRQYFMQYGEV 230
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ G +
Sbjct: 88 KDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKT---- 143
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+KIF+G LP T ++L+ +F
Sbjct: 144 ---------------------------------------RKIFIGGLPPSLTEDELKDHF 164
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
S +G +++ + + TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 165 SSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFA 148
GRG +GK IFVG + E T E ++F ++G I D + K RGFGFVTF+
Sbjct: 46 GRGAGGDSLGK-IFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 104
Query: 149 EEVVADRVSRRSHEICGQQVAIDSATPLDD 178
+ V D+V H I G+ V + P ++
Sbjct: 105 DPSVIDKVLEDDHVIDGRTVEVKRTVPREE 134
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE--DDFRPVGRMSH 59
D + RG GF+TF S DSVE ++ + +LGG V + +A PK+ D GR +H
Sbjct: 178 DHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHSSNGRSNH 237
Query: 60 GGYGAY 65
GG GAY
Sbjct: 238 GG-GAY 242
>gi|195489341|ref|XP_002092695.1| GE11522 [Drosophila yakuba]
gi|194178796|gb|EDW92407.1| GE11522 [Drosophila yakuba]
Length = 534
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAG---PSQNFMMNAAETFG 194
H I G V + +A P + +Q++ N+A +FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRNQQAQSYNYNSANSFG 285
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAE 149
R E+ R I +G LP + T E LR YF +G +L + K T +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGS 157
Query: 150 EVVADRVSRRSHEICGQQVAI 170
RV H I G+ +
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEV 178
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 49/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPANVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAG 180
+G
Sbjct: 176 GSG 178
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQN 67
Query: 160 S-HEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|195028318|ref|XP_001987023.1| GH20198 [Drosophila grimshawi]
gi|193903023|gb|EDW01890.1| GH20198 [Drosophila grimshawi]
Length = 545
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + S QN+ N ++G
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRSHQAQNYSYNTGNSYG 285
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 52/193 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSH-G 60
K+ + RG GF+TFA D+V+ + + H L G T+ PK + R + + G
Sbjct: 51 KNNETGRSRGFGFVTFADPDNVDRALENGPHTLDGRTI-----DPKPCNPRSLHKPKRTG 105
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GY K+F+G LP T DLR
Sbjct: 106 GY---------------------------------------PKVFLGGLPPNITETDLRS 126
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPL 176
+FSR+G +++V Y ++ RGFGF++F E +R + I G+QV I A P
Sbjct: 127 FFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAEPR 186
Query: 177 DDAGPSQNFMMNA 189
D +G N MNA
Sbjct: 187 DGSG--NNNSMNA 197
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 86 HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGF 142
HP E K+FVG L E T E+L+RYF R+G ++D V K TG RGF
Sbjct: 2 HPSKKMNAAELDDHEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGF 61
Query: 143 GFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 175
GFVTFA+ DR + H + G+ + P
Sbjct: 62 GFVTFADPDNVDRALENGPHTLDGRTIDPKPCNP 95
>gi|91087839|ref|XP_967837.1| PREDICTED: similar to TBPH CG10327-PA [Tribolium castaneum]
Length = 450
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q++ K+F+GR +E TA+DLR YF ++G + DV++PK R F FVTF + VA +
Sbjct: 190 QQVPCKVFIGRCTEELTADDLREYFGKYGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 247
Query: 158 RRSHEICGQQVAIDSATP 175
H I G V + +A P
Sbjct: 248 GEDHIIKGVSVHVSNAAP 265
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
R E+ R I +G LP + T ++LR YF FG +L V PK +GFGF+ FA
Sbjct: 100 RMETKLRCTDLIVLG-LPWKTTEQNLREYFETFGEVLMAQVKKDPKTGQSKGFGFIRFAS 158
Query: 150 EVVADRVSRRSHEICGQQVAI 170
RV + H I G+ +
Sbjct: 159 YESQMRVLAQRHMIDGRWCDV 179
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 148 RDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 194
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + Q+ T ++ R +F
Sbjct: 195 -----------------------------------QEKTSKIFVGGVSQDTTDQEFREFF 219
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 220 AQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDACINIPLEIHGKPIEVKRAQP 275
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG +++ V + + RGFGF+TF + + V +
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 175
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 176 EHYLDGKIIDPKRAIPRDE 194
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF +V +MV H L G + RA P+++
Sbjct: 145 RDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 191
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + Q+ T ++ R YF
Sbjct: 192 -----------------------------------QEKTSKIFVGGVSQDTTDQEFREYF 216
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 217 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQP 272
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG +++ V + + RGFGF+TF + + V +
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK 172
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 173 EHFLDGKIIDPKRAIPRDE 191
>gi|357603649|gb|EHJ63861.1| hypothetical protein KGM_07603 [Danaus plexippus]
Length = 411
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHE 162
K+FVGR ++ TA DLR YFS+FG + DV++PK R F F+TF + VA + + H
Sbjct: 192 KVFVGRCTEDLTANDLREYFSQFGEVTDVFIPKP--FRAFSFITFLDPEVAQSLCGQDHI 249
Query: 163 ICGQQVAIDSATPLDDAG-------PSQNF 185
I G V + +A+P + PS+N+
Sbjct: 250 IKGVSVNVSNASPKQNKSGSNQRNLPSRNY 279
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
+ + + + + V LP +AT + +R YF +FG +L + PK +GF F+ F+
Sbjct: 96 KSKRNDNLCSDLIVLGLPWKATEQTVREYFEKFGEVLMAQLKRDPKTGMSKGFAFIRFSS 155
Query: 150 EVVADRVSRRSHEICGQQVAI 170
RV + H I G+ +
Sbjct: 156 YTSQMRVLAQRHMIDGRWCDV 176
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 49/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V++++ H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPANVQHVLQSGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAG 180
+G
Sbjct: 176 GSG 178
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQHVLQS 67
Query: 160 S-HEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|410899382|ref|XP_003963176.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Takifugu
rubripes]
Length = 294
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+LR+YF ++G + DV++PK R F FVTFA+ VA
Sbjct: 188 RKVFVGRCTEDMTAEELRQYFMQYGEVTDVFIPK--PFRAFAFVTFADHQVA-------Q 238
Query: 162 EICGQQVAIDSATP-LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
+CG+ + I + + +A P N N + F + G M T M+
Sbjct: 239 ALCGEDLIIKGVSVHISNAEPKHN---NIHQAFPNFPGGMATLAAMFN 283
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQI 160
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
+V + H I G+ D P A P + T +R Y YG +
Sbjct: 161 KVIAQRHLIDGRWC--DCKLPNSKACPDDRKVFVGRCTEDMTAEELRQYFMQYGEV 214
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDGATGRSRGFGFLTFKDPKTVNVVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T + R YF
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQETTDHEFREYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D + EI G+ + + A P
Sbjct: 104 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLSANLEIHGKPIEVKKAQP 159
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + LR YFS++G +++ V + TG RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 53/215 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFIT+++ V+ +M D HE G V + R PK+
Sbjct: 56 RDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDSV------------ 103
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+S KKIFVG LPQ T +D + +F
Sbjct: 104 --------------------------------QSKDFKTKKIFVGGLPQALTEDDFKHFF 131
Query: 123 SRFGRILDVYV-----PKRTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
++G ++D + KR+ RGFGF+ F+ + V D + + ++ G +V I A P
Sbjct: 132 QKYGPVVDHQIMRDHQTKRS--RGFGFIVFSSDQVVDDLLANGNMIDLAGAKVEIKKAEP 189
Query: 176 LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
+ P + +A+ + G + G YG L
Sbjct: 190 KKSSNPPPSSHGSASRSAYGRDSRGHSSGNDYGGL 224
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG LP++ T D ++F ++G I+D + K T RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 160 SHEICGQQVAIDSATPLD 177
HE G+QV I P D
Sbjct: 84 IHEFNGKQVEIKRTIPKD 101
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GFITFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSASTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YF +FG I + V P RGFGF+TFA
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V ++ HE+ + + A P
Sbjct: 71 DVSSVDKVLAQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGR 56
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P R
Sbjct: 144 DKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 49/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPGNVNHVLQSGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEEASVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAG 180
+G
Sbjct: 176 GSG 178
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNHVLQS 67
Query: 160 S-HEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|334188244|ref|NP_001190485.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008158|gb|AED95541.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 453
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA + E +++ H + G ++VD + + R
Sbjct: 39 KDRATGRARGFGFVVFADPNVAERVVLLKHIIDG-KILVDSIV-----YNQLCR------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR------IGKKIFVGRLPQEATAE 116
+ IS + A A DH + + SS + KKIFVG L T
Sbjct: 87 --SDKCISLSEVVEAKKAVPRDDH--VVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEA 142
Query: 117 DLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDS 172
+ ++YF++FG I DV V RT RGFGF+++ E D+V +++ HE+ G+ V +
Sbjct: 143 EFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKL 202
Query: 173 ATPLDDAGPSQNFMMNAAETFG 194
A P D A + MN +FG
Sbjct: 203 AVPKDMALNTMRNQMN-VNSFG 223
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + LR YF FG +L+ + K TG RGFGFV FA+ VA+RV
Sbjct: 7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLL 66
Query: 160 SHEICGQQVAIDS 172
H I G ++ +DS
Sbjct: 67 KHIIDG-KILVDS 78
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 33 RDGQSGRSRGFGFLTFKDPKTVNTVMVKEHSLDGKLIDPKRAIPRDEQERTA-------- 84
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KIFVG + QEAT +D + +F
Sbjct: 85 ----------------------------------------KIFVGGVSQEATEQDFKEFF 104
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR+LD + + K TG RGFGFVTF +E +R I G+ + + A P
Sbjct: 105 MQFGRVLDATLMMDKDTGRPRGFGFVTFDDEKAVERTLEGPLAILGKGIEVKRAQP 160
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH----RGFGFVTFAEEVVADRVSR 158
K+F+G L E T + L+ YFS+FG +++ V R G RGFGF+TF + + V
Sbjct: 1 KMFIGGLNWETTDQSLKDYFSQFGEVVECTV-MRDGQSGRSRGFGFLTFKDPKTVNTVMV 59
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H + G+ + A P D+
Sbjct: 60 KEHSLDGKLIDPKRAIPRDE 79
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +V+ ++ V H L G + ATPK RP
Sbjct: 238 KDPVTQRSRGFGFITFQEPCTVQKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 286
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 287 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 312
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 313 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 372
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 373 AVTPAAQLL 381
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E +V +
Sbjct: 206 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQKVLKV 265
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 266 PIHTLDGKKIDPKHATP 282
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 324 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 372
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +V+ ++ V H L G + ATPK RP
Sbjct: 254 KDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 302
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 303 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 328
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 329 FSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 388
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 389 AVTPAAQLL 397
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E L+ YF+ FG + DV + P RGFGF+TF E D+V +
Sbjct: 222 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 281
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 282 PIHTLDGKKIDPKHATP 298
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 340 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 388
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ G +
Sbjct: 88 KDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKT---- 143
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+KIF+G LP T ++L+ +F
Sbjct: 144 ---------------------------------------RKIFIGGLPPSLTEDELKDHF 164
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
S +G +++ + + TG RGFGF+TF E +RV R ++ G+QV I A P
Sbjct: 165 SSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFA 148
GRG +GK IFVG + E T E ++F ++G I D + K RGFGFVTF+
Sbjct: 46 GRGAGGDSLGK-IFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 104
Query: 149 EEVVADRVSRRSHEICGQQVAIDSATPLDD 178
+ V D+V H I G+ V + P ++
Sbjct: 105 DPSVIDKVLEDDHVIDGRTVEVKRTVPREE 134
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE--DDFRPVGRMSH 59
D + RG GFITF S DSVE ++ + +LGG V + +A PK+ D GR +H
Sbjct: 178 DHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHSSNGRSNH 237
Query: 60 GGYGAY 65
GG GAY
Sbjct: 238 GG-GAY 242
>gi|195347229|ref|XP_002040156.1| GM15502 [Drosophila sechellia]
gi|195586189|ref|XP_002082860.1| GD25005 [Drosophila simulans]
gi|194135505|gb|EDW57021.1| GM15502 [Drosophila sechellia]
gi|194194869|gb|EDX08445.1| GD25005 [Drosophila simulans]
Length = 531
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + + Q++ N+A +FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFG 285
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G+G Y AY + + ++ + R E+ R I +G LP + T E LR
Sbjct: 68 GWGEY-AYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLG-LPWKTTEESLRE 125
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRSHEICGQQVAI 170
YF +G +L + K T +GFGFV F RV H I G+ +
Sbjct: 126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEV 178
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 149 RDSNTGRSRGFGFLTFKDAKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 195
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + Q+ T ++ R +F
Sbjct: 196 -----------------------------------QEKTSKIFVGGVSQDTTDQEFRDFF 220
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 221 AQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDNCISIPLEIHGKPIEVKRAQP 276
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG +++ V + + RGFGF+TF + + V +
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 176
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 177 EHYLDGKIIDPKRAIPRDE 195
>gi|170057997|ref|XP_001864728.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
gi|167877238|gb|EDS40621.1| TAR DNA-binding protein 43 [Culex quinquefasciatus]
Length = 540
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVV 152
+ + ++ KIF+GR+ ++ TA+D+R YFS++G + DV++PK R F FVTF + V
Sbjct: 200 KDQMQHQMPSKIFLGRVTEDMTADDIREYFSKYGEVTDVFIPK--PFRAFAFVTFIDPHV 257
Query: 153 ADRVSRRSHEICGQQVAIDSATP 175
A + H I G V + +A+P
Sbjct: 258 AQSLCGEDHLIKGASVYVSTASP 280
>gi|17137616|ref|NP_477400.1| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|19549788|ref|NP_599145.1| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|24762415|ref|NP_726373.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|281364145|ref|NP_001163280.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|281364147|ref|NP_001163281.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
gi|19528241|gb|AAL90235.1| GH09868p [Drosophila melanogaster]
gi|21626670|gb|AAF47079.2| TAR DNA-binding protein-43 homolog, isoform B [Drosophila
melanogaster]
gi|21626671|gb|AAF47078.2| TAR DNA-binding protein-43 homolog, isoform C [Drosophila
melanogaster]
gi|21626672|gb|AAM68274.1| TAR DNA-binding protein-43 homolog, isoform D [Drosophila
melanogaster]
gi|63108407|gb|AAY33499.1| RH39704p [Drosophila melanogaster]
gi|220946666|gb|ACL85876.1| TBPH-PB [synthetic construct]
gi|220956308|gb|ACL90697.1| TBPH-PB [synthetic construct]
gi|272432674|gb|ACZ94552.1| TAR DNA-binding protein-43 homolog, isoform E [Drosophila
melanogaster]
gi|272432675|gb|ACZ94553.1| TAR DNA-binding protein-43 homolog, isoform F [Drosophila
melanogaster]
Length = 531
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + + Q++ N+A +FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFG 285
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G+G Y AY + + ++ + R E+ R I +G LP + T E LR
Sbjct: 68 GWGEY-AYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLG-LPWKTTEESLRE 125
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRSHEICGQQVAI 170
YF +G +L + K T +GFGFV F RV H I G+ +
Sbjct: 126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEV 178
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 50/184 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 94 KDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKN------------- 140
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R + + R KKIFVG + Q+ ++++++ Y
Sbjct: 141 -------------------------------RAKQANRT-KKIFVGGVSQDTSSDEVKAY 168
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F++FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 169 FNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 228
Query: 178 DAGP 181
P
Sbjct: 229 AVQP 232
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF FG + DV + P RGFGF+TFAE D+V +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 160 S-HEICGQQVAIDSATPLDDA 179
H + G+++ ATP + A
Sbjct: 122 PIHTLDGKKIDPKHATPKNRA 142
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 180 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 228
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 75/186 (40%), Gaps = 52/186 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSATGRSRGFGFLTFKDPKTVNTVMVKEHFLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + Q+AT ED +F
Sbjct: 79 -----------------------------------QEKTAKIFVGGVSQDATEEDFESFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLDD 178
++FGR++D + + K TG RGFGFVTF + +R + EI G+ + + A P
Sbjct: 104 AQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAVERCLEYHPLEILGKPIEVKRAQPRGK 163
Query: 179 AGPSQN 184
G N
Sbjct: 164 MGELNN 169
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + L YFS+FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HFLDGKIIDPKRAIPRDE 78
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 41/179 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F + ++ + H + G V R P+ D+ + V R S+
Sbjct: 39 KDRTTGRARGFGFVVFGDPSVADRVIQEKHTIDGRAVEAKRVVPR-DEQQNVQRTSN--- 94
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ P KKIFVG L T +D R+YF
Sbjct: 95 ---------------MAGPRT------------------KKIFVGGLAPTVTEDDFRKYF 121
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+FG I DV V HRGFGF+T+ E D+V +++ H++ + V + A P D
Sbjct: 122 EQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQQTFHQLKEKTVEVKRAIPKD 180
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G + + + + L+ YF +G+++DV + K TG RGFGFV F + VADRV +
Sbjct: 7 KIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQE 66
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V P D+
Sbjct: 67 KHTIDGRAVEAKRVVPRDE 85
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 91 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTF 147
Y + E +R KIFVG LP+E T+ ++F +G I D + K +TGH RGFGFVT+
Sbjct: 1910 YYKREGRRRFNVKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTY 1969
Query: 148 AEEVVADRVSRRSHEICGQQVAIDSATP 175
A+ V D+V +H I G+QV I P
Sbjct: 1970 ADPSVVDKVIEDTHIINGKQVEIKRTIP 1997
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 49/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V+ ++ DTH + G V + R PK
Sbjct: 1954 KDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK--------------- 1998
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G S KKIFVG +P ++ R +F
Sbjct: 1999 -----------------------------GSSSSRDFKTKKIFVGGIPTSVDEDEFRDFF 2029
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSA 173
++G + + + + + RGFGF+TF E D + + E+ G QV I A
Sbjct: 2030 MQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKA 2085
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 54/186 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF+ A++VE ++ V H L G + ATPK RP
Sbjct: 251 KDPITQRSRGFGFITFSDAETVEKVLAVPIHTLDGKKIDPKHATPKN---RPKA------ 301
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G+ T KKIFVG + Q+ TA++++ Y
Sbjct: 302 -----------------GSKT-------------------KKIFVGGVSQDTTADEVKAY 325
Query: 122 FSRFGRILDVYV-----PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
FS+FG++ + + KR HRGFGFVTF + + D + H I ++V A P
Sbjct: 326 FSQFGKVEETVMLMDQHTKR--HRGFGFVTFENDDIVDTICEIHFHTIKNKKVECKKAQP 383
Query: 176 LDDAGP 181
+ P
Sbjct: 384 KELVQP 389
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 96 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EV 151
S++ K+FVG L + +A+ L++YF FG + +V + P RGFGF+TF++ E
Sbjct: 212 STEGTSAKLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAET 271
Query: 152 VADRVSRRSHEICGQQVAIDSATP 175
V ++ H + G+++ ATP
Sbjct: 272 VEKVLAVPIHTLDGKKIDPKHATP 295
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 337 MLMDQHTKRHRGFGFVTFENDDIVDTICEIHFHTIKNKKVECKKAQPKE 385
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 80 RDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 126
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ + YF
Sbjct: 127 -----------------------------------QEKTSKIFVGGVSQETTDQEFKDYF 151
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D + EI G+ + + A P
Sbjct: 152 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGVDACLKTHLEIHGKPIEVKKAQP 207
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YF++FG +++ V + TG RGFGF+TF + + V +
Sbjct: 48 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 107
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 108 EHFLDGKIIDPKRAIPRDE 126
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 145 RDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 191
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ R YF
Sbjct: 192 -----------------------------------QEKTSKIFVGGVSQETTDQEFRDYF 216
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + EI G+ V + A P
Sbjct: 217 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACINVPLEIHGKPVEVKRAQP 272
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YF +FG +++ V + + RGFGF+TF + + V +
Sbjct: 113 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 172
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 173 EHFLDGKIIDPKRAIPRDE 191
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 42/176 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G +V R P++ D
Sbjct: 148 RDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGK-IVSYRLIPQQID------------ 194
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
P R E Q KIFVG + QE T ++ + YF
Sbjct: 195 ------------------------PKRAIPRDE--QEKTSKIFVGGVSQETTDQEFKEYF 228
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 229 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQP 284
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLR 119
GG G+ + S + + P Y G+ + ++S + K+F+G L E T + LR
Sbjct: 79 GGGGSTAGHTSQVATHDDVPTPPPY---GTVH---KASAKEDGKMFIGGLNWETTDQSLR 132
Query: 120 RYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVA 169
YFS+FG +++ V + + RGFGF+TF + + V + H + G+ V+
Sbjct: 133 DYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIVS 185
>gi|3882096|dbj|BAA34421.1| TAR-binding protein [Drosophila melanogaster]
gi|3882126|dbj|BAA34428.1| TAR-binding protein [Drosophila melanogaster]
gi|3882128|dbj|BAA34429.1| TAR-binding protein [Drosophila melanogaster]
Length = 531
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + + Q++ N+A +FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFG 285
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G+G Y AY + + ++ + R E+ R I +G LP + T E LR
Sbjct: 68 GWGEY-AYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLG-LPWKTTEESLRE 125
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRSHEICGQQVAI 170
YF +G +L + K T +GFGFV F RV H I G+ +
Sbjct: 126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEV 178
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 85/211 (40%), Gaps = 48/211 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ + RG GF+TFA ++V+ + + H L G T+ P+ +P GG
Sbjct: 45 KNNETGRSRGFGFVTFADPENVDRALENGPHTLDGRTIDPKPCNPRSQ-HKP---KRTGG 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
Y K+F+G LP T DLR +
Sbjct: 101 Y---------------------------------------PKVFLGGLPPNITETDLRSF 121
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G +++V Y ++ RGFGF++F EV +R + I G+QV + A P D
Sbjct: 122 FCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAVERATTDHFVHISGKQVEVKKAEPRD 181
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
S N M + +G P G+M G
Sbjct: 182 GNQNSNNSMSTDSYQWGSPQAPPMGNGQMGG 212
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADR-VSR 158
K+FVG L E T E+L+RYFSR+G ++D V K TG RGFGFVTFA+ DR +
Sbjct: 13 KLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALEN 72
Query: 159 RSHEICGQQVAIDSATPLDDAGP 181
H + G+ + P P
Sbjct: 73 GPHTLDGRTIDPKPCNPRSQHKP 95
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +V+ ++ V H L G + ATPK RP
Sbjct: 219 KDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 267
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +AE+++ Y
Sbjct: 268 ------------RQA----------------------NKTKKIFVGGVSQDTSAEEVKAY 293
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 294 FSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 353
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 354 AVTPAAQLL 362
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E L+ YF+ FG + DV + P RGFGF+TF E D+V +
Sbjct: 187 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 246
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 247 PIHTLDGKKIDPKHATP 263
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 305 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 353
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ + YF
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQETTDQEFKDYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D S EI G+ + + A P
Sbjct: 104 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLSTSLEIHGKPIEVKKAQP 159
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + LR YFS+FG +++ V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HFLDGKIIDPKRAIPRDE 78
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ G +
Sbjct: 70 KDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKT---- 125
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+KIF+G LP T ++L+ +F
Sbjct: 126 ---------------------------------------RKIFIGGLPPSLTEDELKDHF 146
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
S +G +++ + + TG RGFGF+TF E +RV R ++ G+QV I A P
Sbjct: 147 SSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 204
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 86 HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGF 142
HPG GR S KIFVG + E T E ++F ++G I D + K RGF
Sbjct: 25 HPGRRVGRDGGSG----KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGF 80
Query: 143 GFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
GFVTF++ V D+V H I G+ V + P ++
Sbjct: 81 GFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREE 116
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE--DDFRPVGRMSH 59
D + RG GFITF S DSVE ++ + +LGG V + +A PK+ D GR +H
Sbjct: 160 DHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHSSNGRSNH 219
Query: 60 GGYGAY 65
GG GAY
Sbjct: 220 GG-GAY 224
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 48/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G TV V R P+E+ G +
Sbjct: 147 KDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVIDGRTVEVKRTVPREEMITKDGPKT---- 202
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+KIF+G LP T ++L+ +F
Sbjct: 203 ---------------------------------------RKIFIGGLPPSLTEDELKDHF 223
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
S +G +++ + + TG RGFGF+TF E +RV R ++ G+QV I A P
Sbjct: 224 SSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 281
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFA 148
GRG +GK IFVG + E T E ++F ++G I D + K RGFGFVTF+
Sbjct: 105 GRGAGGDSLGK-IFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFS 163
Query: 149 EEVVADRVSRRSHEICGQQVAIDSATPLDD 178
+ V D+V H I G+ V + P ++
Sbjct: 164 DPSVIDKVLEDDHVIDGRTVEVKRTVPREE 193
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE--DDFRPVGRMSH 59
D + RG GFITF S DSVE ++ + +LGG V + +A PK+ D GR +H
Sbjct: 237 DHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGSDHSSNGRSNH 296
Query: 60 GGYGAY 65
GG GAY
Sbjct: 297 GG-GAY 301
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ F+ ++ ++ D H + V V RA +E+ P GR G + A + S
Sbjct: 47 RGFGFVAFSDPAVIDRVLQDKHHIDNRDVDVKRAMSREEQ-SPAGR--SGNFNASRNFDS 103
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
A KKIFVG LP T+++ R YF +G + D
Sbjct: 104 GANVRT-------------------------KKIFVGGLPPALTSDEFRAYFETYGPVSD 138
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+ + + T RGFGFV+F E D V ++ H++ G+QV + A P D
Sbjct: 139 AVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKD 189
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + LR YFS FG +L V V K TG RGFGFV F++ V DRV +
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query: 160 SHEICGQQVAIDSATPLDDAGP---SQNFMMNAAETF 193
H I + V + A ++ P S NF NA+ F
Sbjct: 67 KHHIDNRDVDVKRAMSREEQSPAGRSGNF--NASRNF 101
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ ++ RG GF++F S DSV+ ++ T H+L G V V RA PK+
Sbjct: 144 DQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKD 189
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 80/189 (42%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +V+ ++ V H L G + ATPK RP R ++
Sbjct: 232 KDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKN---RP--RQANKT 286
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + Q+ +AE+++ Y
Sbjct: 287 ----------------------------------------KKIFVGGVSQDTSAEEVKAY 306
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 307 FSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 366
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 367 AVTPAAQLL 375
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + +++ L+ YF+ FG + DV + P RGFGF+TF E D+V +
Sbjct: 200 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 260 PIHTLDGKKIDPKHATP 276
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 318 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 366
>gi|294932585|ref|XP_002780346.1| Glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890268|gb|EER12141.1| Glycine-rich RNA-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 277
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 51/212 (24%)
Query: 11 RGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GF+T+A+ VEN + + H+L G V V+R+ +D + GG+G+ +
Sbjct: 10 RGFGFVTYATTGEVENCLANGPHQLNGKHVDVNRSQDPKDAHK-------GGWGSDRSGG 62
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
+ D P KK+F G LPQ+ E LR++FS++G I+
Sbjct: 63 PSRRGGGG-------DDP--------------KKVFCGGLPQDCDTERLRQHFSQYGNIV 101
Query: 130 DVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFM 186
D + TG +G+GFVTF E + + I G+ V + +
Sbjct: 102 DCIAMRDRDTGRSKGYGFVTFDSEDAVNAAINGDNTIDGRWVEVRN-------------- 147
Query: 187 MNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG 218
++ FGG G + GR +GS F+ GYG
Sbjct: 148 ---SQRFGGSDGSSQGKGRGWGS--FESQGYG 174
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF A +V +MV H L G + RA P+++
Sbjct: 141 RDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 187
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ R YF
Sbjct: 188 -----------------------------------QEKTSKIFVGGVSQETTDQEFRDYF 212
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + EI G+ V + A P
Sbjct: 213 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACINVPLEIHGKPVEVKRAQP 268
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEV 151
++S + K+F+G L E T + LR YF +FG +++ V + + RGFGF+TF +
Sbjct: 101 KASAKDDGKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAK 160
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDD 178
+ V + H + G+ + A P D+
Sbjct: 161 TVNIVMVKEHFLDGKIIDPKRAIPRDE 187
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F+ ++ ++ D H + G V RA +E+
Sbjct: 39 RDKTTGRPRGFGFVVFSDPSLLDQVLQDKHTIDGRQVEAKRALSREEQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+TR + G F KKIFVG LP T + R+YF
Sbjct: 87 -------QTSTRSGINNSGRSSGGSGYFRT---------KKIFVGGLPSALTEDGFRQYF 130
Query: 123 SRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+G++ DV Y RGFGF+TF E DRV +S HE+ G+ V + A P D
Sbjct: 131 ESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRALPKD 189
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + E LR YFS+FG ++ + K TG RGFGFV F++ + D+V +
Sbjct: 7 KLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQD 66
Query: 160 SHEICGQQVAIDSA 173
H I G+QV A
Sbjct: 67 KHTIDGRQVEAKRA 80
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
DQ ++ RG GFITF + D+V+ ++ + HEL G V V RA PK+ + GR + Y
Sbjct: 144 DQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVEVKRALPKDANPGSGGRAGYQNY 203
Query: 63 GA 64
GA
Sbjct: 204 GA 205
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 195 RGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDEQER------------------ 236
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
KIFVG + QEAT +D +++F +FGR++D
Sbjct: 237 ------------------------------TSKIFVGGVSQEATEQDFKQFFMQFGRVVD 266
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K +G RGFGFVTF E + EI G+ + + A P
Sbjct: 267 ATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQP 314
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 215 EHYLDGKIIDPKRAIPRDE 233
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 49/183 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPANVNHVLQSGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAG 180
+G
Sbjct: 176 GSG 178
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNHVLQS 67
Query: 160 S-HEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 68 GPHTLDGRTIDPKPCNP 84
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 82/209 (39%), Gaps = 67/209 (32%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 74 RDSATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 120
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ + YF
Sbjct: 121 -----------------------------------QEKTSKIFVGGVSQETTDQEFKEYF 145
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPL--- 176
++FGR++D + + K TG RGFGF+TF E + EI G+ + + A P
Sbjct: 146 AQFGRVVDATLMMDKDTGRPRGFGFLTFESEAGVEACLSTELEIHGKAIEVKKAQPRGNL 205
Query: 177 ---DDA----GPSQNFMMNAAETFGGYGG 198
DDA GP F GGYGG
Sbjct: 206 RDDDDASRRGGPGNKFRK------GGYGG 228
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG +L+ V + + RGFGF+TF + + V +
Sbjct: 42 KMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMVK 101
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 102 EHYLDGKIIDPKRAIPRDE 120
>gi|298710527|emb|CBJ25591.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 502
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 72/179 (40%), Gaps = 41/179 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFI F ++ ++ H++ G V V RA PK + P R S
Sbjct: 181 KDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSRSSR--- 237
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A T KIFVG L + R+YF
Sbjct: 238 -------PAET----------------------------NKIFVGGLAPTVMMAEFRKYF 262
Query: 123 SRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
FG ++D V + RGFGFVTF E+ V + +HEI G+ V + A P ++
Sbjct: 263 ETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMGTHEINGKMVEVKRAEPKEN 321
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + T E LR +F ++G + D+ + K TGH RGFGF+ F + V D + +
Sbjct: 149 KLFIGGISWQTTEEGLRHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQ 208
Query: 160 SHEICGQQVAIDSATPLDDA-GPS 182
H+I G+ V + A P +A GPS
Sbjct: 209 EHKIDGKVVDVKRAVPKSEAPGPS 232
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA A SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGF+TF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V ++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GFITF D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFITFEGEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 47/184 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG GFIT+A V+++M D+H + G V + R PK+
Sbjct: 55 KNKHTSQPRGFGFITYADPAVVDHVMEDSHVINGKQVEIKRTIPKD-------------- 100
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ +P F KKIFVG LP T +D + +F
Sbjct: 101 -------------------SMQSNPRDF---------KTKKIFVGGLPSTLTEDDFKDFF 132
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATPLD 177
++G ++D + + RGFGFV F E V D + + ++ G +V I A P
Sbjct: 133 EKYGTVVDHQIMRDHQTRRSRGFGFVVFCSEQVVDDLLANGNMIDLAGSKVEIKKAEPKK 192
Query: 178 DAGP 181
+ P
Sbjct: 193 SSNP 196
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRR 159
KIFVG LP++ T +++F ++G I+D + K + RGFGF+T+A+ V D V
Sbjct: 23 KIFVGGLPRDTTPAVFQKHFGQYGEIIDSVIMKNKHTSQPRGFGFITYADPAVVDHVMED 82
Query: 160 SHEICGQQVAIDSATPLD 177
SH I G+QV I P D
Sbjct: 83 SHVINGKQVEIKRTIPKD 100
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ FA V+ + D H L G TV V RA +E+
Sbjct: 39 RDKTTGRPRGFGFVVFADPAVVDRALQDPHTLDGRTVDVKRALSREEQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ + P+ + G G G+++ KKIFVG LP T + R+YF
Sbjct: 87 -----------QASKAANPSGGRNTGGGNGGGDANGARTKKIFVGGLPSTLTEDGFRQYF 135
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
FG + DV V RGFGF+TF E D V +++ H++ G+ V + A P
Sbjct: 136 QTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQKTFHDLGGKLVEVKRALP 192
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T E L +FS +G + V K TG RGFGFV FA+ V DR +
Sbjct: 7 KLFIGGISWETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRALQD 66
Query: 160 SHEICGQQVAIDSA 173
H + G+ V + A
Sbjct: 67 PHTLDGRTVDVKRA 80
>gi|302771077|ref|XP_002968957.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
gi|302816651|ref|XP_002990004.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300142315|gb|EFJ09017.1| hypothetical protein SELMODRAFT_48637 [Selaginella moellendorffii]
gi|300163462|gb|EFJ30073.1| hypothetical protein SELMODRAFT_68338 [Selaginella moellendorffii]
Length = 162
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 48/174 (27%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ +D+ S RG GF+TFA +D + ++ D H L G TV R+ P+E
Sbjct: 32 IMRDRSSGNPRGFGFVTFADSDVCDRVLRDKHVLDGRTVECKRSIPRE------------ 79
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+ G T KKIFVG +P T E+ +
Sbjct: 80 ------------SMLVVKGPKT-------------------KKIFVGGIPPSITEEEFKA 108
Query: 121 YFSRFGRILD--VYVPKRTGH-RGFGFVTF-AEEVVADRVSR-RSHEICGQQVA 169
YFS FG +++ + TG RGFGF+ F +E+ V D +S R HE+ G+QV
Sbjct: 109 YFSSFGNVIEHQIMQDHNTGRSRGFGFIVFDSEQTVEDVLSHGRMHELGGKQVT 162
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L + T E L +F ++G I D + + +G+ RGFGFVTFA+ V DRV R
Sbjct: 2 KIFIGGLSWDTTTEKLESHFKKYGEITDAVIMRDRSSGNPRGFGFVTFADSDVCDRVLRD 61
Query: 160 SHEICGQQVAIDSATP 175
H + G+ V + P
Sbjct: 62 KHVLDGRTVECKRSIP 77
>gi|244790069|ref|NP_001156444.1| TAR DNA binding protein-like [Acyrthosiphon pisum]
gi|239792762|dbj|BAH72685.1| ACYPI004992 [Acyrthosiphon pisum]
Length = 333
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 99 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSR 158
++ KIFVGRL ++ + DL +YFS++G I DV++PK R FGFVTF + VA +
Sbjct: 187 KVPHKIFVGRLTEDISEPDLSKYFSQYGEITDVFIPK--PFRAFGFVTFNDASVAQSLCD 244
Query: 159 RSHEICGQQVAIDSATPLDDAG 180
H + G + I A P D
Sbjct: 245 EDHIVKGVSLHISEANPKSDQN 266
>gi|347970001|ref|XP_309663.5| AGAP003497-PA [Anopheles gambiae str. PEST]
gi|333466662|gb|EAA05403.6| AGAP003497-PA [Anopheles gambiae str. PEST]
Length = 569
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVV 152
+ ++ ++ KIF+GRL ++ ++D+R YFS++G + DV++PK R F FVTF + V
Sbjct: 192 KDQTQHQMPSKIFLGRLTEDINSDDIRDYFSKYGEVTDVFIPKP--FRAFAFVTFIDPHV 249
Query: 153 ADRVSRRSHEICGQQVAIDSATPLDDAG 180
A + H I G V + +A+P + G
Sbjct: 250 AQSLCGEDHLIKGTSVYVSTASPRPEHG 277
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFA 148
R ES R + V LP + T E LR YF FG +L V + K +TG +G+GF+ FA
Sbjct: 106 RIESRNRTTTDLIVLGLPWKTTEESLREYFETFGELLVVQIKKDSKTGQSKGYGFIRFA 164
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V++++ DTH + G V + R PK
Sbjct: 52 KDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPK--------------- 96
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G G+S KKIFVG LP T ++ + +F
Sbjct: 97 -----------------------------GSGQSKDFKTKKIFVGGLPSTVTEDEFKDFF 127
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATPLD 177
S++G++ + + + RGFGF+ F E V D + + ++ G QV I A P
Sbjct: 128 SKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAEPKK 187
Query: 178 DAGP 181
+ P
Sbjct: 188 ASNP 191
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + K TG RGFGFVT+A+ V D V
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G+QV I P +G S++F
Sbjct: 80 THVINGKQVEIKRTIP-KGSGQSKDF 104
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F+ V+ + + H + G V +A P+ +
Sbjct: 39 KDRLTGRARGFGFVVFSDPSIVDIALQEKHTIDGRAVEAKKAVPRSEQQNT--------- 89
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
N+Y + ++ G G S R KKIFVG LP T ED + YF
Sbjct: 90 -RTNSYNNNDSQ-----------------GYGGGSVRT-KKIFVGGLPANLTEEDFKNYF 130
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+FG I DV V RGFGF++F E + V ++S H++ + V + A P D
Sbjct: 131 QQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQKSFHQLNEKLVEVKRALPKD 189
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G + E + E LR YFS++G ++ + K TG RGFGFV F++ + D +
Sbjct: 7 KIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVDIALQE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P + ++ N ++ G GG +RT G L
Sbjct: 67 KHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYGGGSVRTKKIFVGGL 117
>gi|17137614|ref|NP_477399.1| TAR DNA-binding protein-43 homolog, isoform A [Drosophila
melanogaster]
gi|21626673|gb|AAF47080.2| TAR DNA-binding protein-43 homolog, isoform A [Drosophila
melanogaster]
Length = 332
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 62 YGAYNAYISAAT-RYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+G+Y+A + T R+ G P S G G ++ K+FVGR ++ ++DLR
Sbjct: 155 FGSYDAQMRVLTNRHLIDGRWCEVKVPNS-KGMG---HQVPCKVFVGRCTEDINSDDLRE 210
Query: 121 YFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 180
YFS+FG + DV++P+ R F FVTF + VA + H I G V + +A P +
Sbjct: 211 YFSKFGEVTDVFIPR--PFRAFSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKAEQN 268
Query: 181 PS---QNFMMNAAETFG 194
+ Q++ N+A +FG
Sbjct: 269 RNQQVQSYNYNSANSFG 285
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 9/155 (5%)
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G+G Y AY + + ++ + R E+ R I +G LP + T E LR
Sbjct: 68 GWGEY-AYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLG-LPWKTTEESLRE 125
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRSHEICGQ--QVAIDSATP 175
YF +G +L + K T +GFGFV F RV H I G+ +V + ++
Sbjct: 126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVKVPNSKG 185
Query: 176 LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
+ P + F+ E +R Y +G +
Sbjct: 186 MGHQVPCKVFVGRCTEDIN--SDDLREYFSKFGEV 218
>gi|3882097|dbj|BAA34422.1| TAR-binding protein [Drosophila melanogaster]
gi|3882130|dbj|BAA34430.1| TAR-binding protein [Drosophila melanogaster]
Length = 332
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 62 YGAYNAYISAAT-RYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+G+Y+A + T R+ G P S G G ++ K+FVGR ++ ++DLR
Sbjct: 155 FGSYDAQMRVLTNRHLIDGRWCEVKVPNS-KGMG---HQVPCKVFVGRCTEDINSDDLRE 210
Query: 121 YFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 180
YFS+FG + DV++P+ R F FVTF + VA + H I G V + +A P +
Sbjct: 211 YFSKFGEVTDVFIPR--PFRAFSFVTFLDPDVAQSLCGEDHIIKGVSVHVSNAAPKAEQN 268
Query: 181 PS---QNFMMNAAETFG 194
+ Q++ N+A +FG
Sbjct: 269 RNQQVQSYNYNSANSFG 285
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 9/155 (5%)
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G+G Y AY + + ++ + R E+ R I +G LP + T E LR
Sbjct: 68 GWGEY-AYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLG-LPWKTTEESLRE 125
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRSHEICGQ--QVAIDSATP 175
YF +G +L + K T +GFGFV F RV H I G+ +V + ++
Sbjct: 126 YFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVKVPNSKG 185
Query: 176 LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
+ P + F+ E +R Y +G +
Sbjct: 186 MGHQVPCKVFVGRCTEDIN--SDDLREYFSKFGEV 218
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 70/176 (39%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 422 RDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 468
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T + R YF
Sbjct: 469 -----------------------------------QEKTSKIFVGGVSQETTDHEFREYF 493
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 494 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLATPLEIHGKPIEVKKAQP 549
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 82 TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH 139
T DH +F GE++ +K+F+G L E T + LR YFS+FG +L+ V + TG
Sbjct: 376 TTPDHGDNF---GENT----RKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGATGR 428
Query: 140 -RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
RGFGF+TF + + V + H + G+ + A P D+
Sbjct: 429 SRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE 468
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 79/181 (43%), Gaps = 47/181 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K +G GFIT++ A V+ + H++ G V RA P+E+ RP
Sbjct: 50 KDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRP-------- 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
E+S + KK+FV L Q+ EDLR Y
Sbjct: 102 ---------------------------------EASATV-KKLFVAGLKQDIEEEDLREY 127
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSATPLD 177
FS FG I+ V V K TG RGFGFV F + DRV +++H+I Q + + A
Sbjct: 128 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISKT 187
Query: 178 D 178
D
Sbjct: 188 D 188
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
+K+F+G L T L+ ++ ++G I+DV V PK +GFGF+T+++ + D +
Sbjct: 17 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 76
Query: 158 RRSHEICGQQVAIDSATPLDD 178
R H+I G+ V A P ++
Sbjct: 77 NRPHKIDGRIVEPKRAVPREE 97
>gi|294933824|ref|XP_002780863.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
gi|239890990|gb|EER12658.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
Length = 381
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 51/212 (24%)
Query: 11 RGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GF+T+A+ VEN + + H+L G V V+R+ +D + GG+G+ +
Sbjct: 114 RGFGFVTYATTGEVENCLANGPHQLNGKHVDVNRSQDPKDAHK-------GGWGSDRSGG 166
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
+ D P KK+F G LPQ+ E LR++FS++G I+
Sbjct: 167 PSRRGGGG-------DDP--------------KKVFCGGLPQDCDTERLRQHFSQYGNIV 205
Query: 130 DVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFM 186
D + TG +G+GFVTF E + + I G+ V + +
Sbjct: 206 DCIAMRDRDTGRSKGYGFVTFDSEDAVNAAINGDNTIDGRWVEVRN-------------- 251
Query: 187 MNAAETFGGYGGPMRTYGRMYGSLDFDDWGYG 218
++ FGG G + GR +GS F+ GYG
Sbjct: 252 ---SQRFGGSDGSSQGKGRGWGS--FESQGYG 278
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEE-VVADRVS 157
+++FVG +P+ T +D RYFS+FG + V K TG RGFGFVT+A V + ++
Sbjct: 73 RQLFVGGIPEGFTDDDFHRYFSQFGNVERSIVMTDKMTGRCRGFGFVTYATTGEVENCLA 132
Query: 158 RRSHEICGQQVAIDSATPLDDA 179
H++ G+ V ++ + DA
Sbjct: 133 NGPHQLNGKHVDVNRSQDPKDA 154
>gi|405965286|gb|EKC30669.1| TAR DNA-binding protein 43 [Crassostrea gigas]
Length = 380
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 96 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADR 155
+++ + +K+FV R ++ TA+DL+ YFS++G + DV++PK R F FVTFA+ +A
Sbjct: 164 AAEMVSRKVFVARCTEDITADDLKSYFSKYGEVSDVFIPKP--FRAFAFVTFADHRIARS 221
Query: 156 VSRRSHEICGQQVAIDSATP 175
+ H I G V + +A P
Sbjct: 222 LCGEDHIIKGASVHVTTAAP 241
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE----E 150
QR I +G LP ++ +DLRRYFS +G +L V V PK +GFGF+ F E E
Sbjct: 104 QRCSDLIVLG-LPWKSNEDDLRRYFSTYGELLLVQVKRDPKTGASKGFGFIRFLEYDSQE 162
Query: 151 VVADRVSRR 159
A+ VSR+
Sbjct: 163 GAAEMVSRK 171
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ F+ ++ ++ D H + V V RA +E+ P GR G + A + S
Sbjct: 47 RGFGFVAFSDPAVIDRVLQDKHHIDNRDVDVKRAMSREEQ-SPAGR--SGTFNASRNFDS 103
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
A KKIFVG LP T+++ R YF +G + D
Sbjct: 104 GANVRT-------------------------KKIFVGGLPPALTSDEFRAYFETYGPVSD 138
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+ + + T RGFGFV+F E D V ++ H++ G+QV + A P D
Sbjct: 139 AVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKD 189
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + LR YFS FG +L V V K TG RGFGFV F++ V DRV +
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPS-QNFMMNAAETF 193
H I + V + A ++ P+ ++ NA+ F
Sbjct: 67 KHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNF 101
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ ++ RG GF++F S DSV+ ++ T H+L G V V RA PK+
Sbjct: 144 DQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQVEVKRALPKD 189
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++
Sbjct: 195 RGFGFLTFKDPKTVNTVMVKEHYLDGKIIDPKRAIPRDE--------------------- 233
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + QEAT +D +++F +FGR++D
Sbjct: 234 ---------------------------QERTSKIFVGGVSQEATEQDFKQFFMQFGRVVD 266
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K +G RGFGFVTF E + EI G+ + + A P
Sbjct: 267 ATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEILGKPIEVKKAQP 314
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + L+ YFS+FG + + V + TG RGFGF+TF + + V +
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 215 EHYLDGKIIDPKRAIPRDE 233
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 82/205 (40%), Gaps = 60/205 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD + RG GF+TFAS+ SV+ ++ TH L G + RA PKE+
Sbjct: 139 KDNATGRSRGFGFLTFASSSSVDEVLKKTHVLDGKLIDPKRAIPKEE------------- 185
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + E T + YF
Sbjct: 186 -----------------------------------QDKTGKIFVGGVAPEVTEAEFTEYF 210
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEIC-GQQVAIDSATPLDD 178
+FG I+D + + K TG RG+GFVT+ DRV++ + + G+ + I A P +
Sbjct: 211 QQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVTQNKYVLFHGKNMEIKRAEPRN- 269
Query: 179 AGPSQNFMMNAAETFGGYGGPMRTY 203
A ++ G P +TY
Sbjct: 270 -------QQKAGSSYSNIGQPQQTY 287
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E ++ YFS+FG ++D+ + K RGFGF+TFA D V ++
Sbjct: 107 KMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVLKK 166
Query: 160 SHEICGQQVAIDSATPLDD 178
+H + G+ + A P ++
Sbjct: 167 THVLDGKLIDPKRAIPKEE 185
>gi|339243191|ref|XP_003377521.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316973670|gb|EFV57234.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 231
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTG-HRGFGFVTF-AEEVVADRVS 157
KKIFVG L T ED++ YF+++GRI D + K T HRGFGF+TF E+VV V
Sbjct: 6 KKIFVGGLSASTTLEDMKNYFTQYGRIEDSMLMFDKSTNRHRGFGFITFDNEDVVEKVVE 65
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGR 205
HEI G+ V A P + P Q N A + YGG YG
Sbjct: 66 IHFHEINGKMVECKKAQPKEVMLPVQ-IAKNRAFSRKFYGGLADLYGN 112
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GFITF + D VE ++ + HE+ G V +A PKE
Sbjct: 40 DKSTNRHRGFGFITFDNEDVVEKVVEIHFHEINGKMVECKKAQPKE 85
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 50/178 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 73 KDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPK-------------- 118
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R + + R KKIFVG + Q+ ++E+++ Y
Sbjct: 119 ------------------------------NRAKQANRT-KKIFVGGVSQDTSSEEVKAY 147
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F++FG++ + + + HRGFGFVTF E V DRV H I ++V A P
Sbjct: 148 FNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQP 205
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF FG + DV + P RGFGF+TFAE D+V +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 160 S-HEICGQQVAIDSATPLDDA 179
H + G+++ ATP + A
Sbjct: 101 PIHTLDGKKIDPKHATPKNRA 121
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 159 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 207
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 71/169 (42%), Gaps = 52/169 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++
Sbjct: 209 RGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE--------------------- 247
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + QEAT D R YF++FGR+LD
Sbjct: 248 ---------------------------QEKTSKIFVGGVSQEATETDFREYFTQFGRVLD 280
Query: 131 --VYVPKRTGH-RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF +E V + ++ + I + + + A P
Sbjct: 281 ATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLAILDKPIEVKKAQP 329
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E L+ YFS++G +++ V + TG RGFGF+TF + + V +
Sbjct: 169 KMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKDPKTVNIVMVK 228
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 229 EHYLDGKIIDPKRAIPRDE 247
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 53 RDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF ++G + + V P RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 53 RDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 53 RDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|115475858|ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|42409159|dbj|BAD10426.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|215768436|dbj|BAH00665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200931|gb|EEC83358.1| hypothetical protein OsI_28764 [Oryza sativa Indica Group]
gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like [Oryza sativa Indica Group]
Length = 350
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 50/185 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GFITFA V+ ++ D H + G V + R PK
Sbjct: 48 KDRFTQKPRGFGFITFADPAVVDRVIEDNHVINGKEVEIKRTIPK--------------- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA L D KKIFVG LP ++ + +F
Sbjct: 93 ----------------GAAPLKDFKT-------------KKIFVGGLPSALKEDEFKEFF 123
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH--EICGQQVAIDSATPL 176
S+FG++++ + + RGFGFV F AE+ V + ++++ + ++ G QV I A P
Sbjct: 124 SKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLAKKGNMIDLNGSQVEIKKAEPK 183
Query: 177 DDAGP 181
+ P
Sbjct: 184 KPSNP 188
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIF+G LP++ T + YF ++G I+D + K RGFGF+TFA+ V DRV
Sbjct: 16 KIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRVIED 75
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G++V I P A P ++F
Sbjct: 76 NHVINGKEVEIKRTIP-KGAAPLKDF 100
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 50/184 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 94 KDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPK-------------- 139
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R + + R KKIFVG + Q+ ++++++ Y
Sbjct: 140 ------------------------------NRAKQANRT-KKIFVGGVSQDTSSDEVKAY 168
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F++FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 169 FNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 228
Query: 178 DAGP 181
P
Sbjct: 229 AVQP 232
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF FG + DV + P RGFGF+TFAE D+V +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 160 S-HEICGQQVAIDSATPLDDA 179
H + G+++ ATP + A
Sbjct: 122 PIHTLDGKKIDPKHATPKNRA 142
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 180 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 228
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 50/181 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT--HELGGSTVVVDRATPKEDDFRPVGRMSHG 60
K+ S RG GF+TFA S+ NL++ H+L G T+ PK + R + + G
Sbjct: 46 KNSESGRSRGFGFVTFADP-SLVNLVLQNGPHQLDGRTI-----DPKPCNPRTLQKPKRG 99
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G G P K+F+G LP T DLR
Sbjct: 100 G-----------------GYP---------------------KVFLGGLPSNVTETDLRV 121
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPL 176
+F R+G++++V Y +R RGFGF++F +E+ +RV++ + G+QV I A P
Sbjct: 122 FFGRYGKVMEVVIMYDQERKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPR 181
Query: 177 D 177
D
Sbjct: 182 D 182
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E + E+L+RYFSR+G ++D V K + RGFGFVTFA+ + + V +
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 73
Query: 160 -SHEICGQQVAIDSATPLDDAGPSQ----------NFMMNAAET-----FGGYGGPM--- 200
H++ G+ + P P + N ET FG YG M
Sbjct: 74 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVV 133
Query: 201 ------RTYGRMYGSLDFDD 214
R R +G L F+D
Sbjct: 134 IMYDQERKKSRGFGFLSFED 153
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T + R YF
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQETTDHEFREYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 104 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLEIHGKPIEVKKAQP 159
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + LR YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 53 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSANTVVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 97 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVA 153
SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+
Sbjct: 15 SQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASV 74
Query: 154 DRVSRRSHE 162
D+V + H
Sbjct: 75 DKVLAQPHH 83
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 143 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 193
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 53 RDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPA 193
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF ++G + + V P RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 47 RDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 93
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T + R YF
Sbjct: 94 -----------------------------------QEKTSKIFVGGVSQETTDHEFREYF 118
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 119 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLEIHGKPIEVKKAQP 174
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSR 158
+K+F+G L E T + LR YFS FG +++ V + TG RGFGF+TF + + V
Sbjct: 14 RKMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV 73
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H + G+ + A P D+
Sbjct: 74 KEHYLDGKIIDPKRAIPRDE 93
>gi|195156455|ref|XP_002019115.1| GL26194 [Drosophila persimilis]
gi|194115268|gb|EDW37311.1| GL26194 [Drosophila persimilis]
Length = 223
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 53/211 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA +V +++ + H L G T+ PK + R + + GG
Sbjct: 40 KNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRTI-----DPKPCNPRTLQKPKKGG 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G K+F+G LP T DLR +
Sbjct: 95 ---------------------------------------GYKVFLGGLPSNVTETDLRTF 115
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++ +V Y ++ RGFGF++F EE + V+ + + G+QV I A P D
Sbjct: 116 FGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD 175
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
+G QN + T GG G M + +G
Sbjct: 176 GSG-GQN---SNNSTVGGAYGKMNSECSHWG 202
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L RYF RFG I+D V K RGFGFVTFA+ + V +
Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
Query: 160 S-HEICGQQVAIDSATPLDDAGPSQ 183
H + G+ + P P +
Sbjct: 68 GPHTLDGRTIDPKPCNPRTLQKPKK 92
>gi|195573919|ref|XP_002104939.1| msi [Drosophila simulans]
gi|194200866|gb|EDX14442.1| msi [Drosophila simulans]
Length = 459
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 74/181 (40%), Gaps = 50/181 (27%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITF +VE ++ V H L G + ATPK
Sbjct: 69 RGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPK---------------------- 106
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
R + + KKIFVG + Q+ +AE+++ YFS+FG +
Sbjct: 107 ----------------------NRPRQANKT-KKIFVGGVSQDTSAEEVKAYFSQFGPVE 143
Query: 130 DVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNF 185
+ + + HRGFGFVTF E V DRV H I ++V A P + P+
Sbjct: 144 ETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPAAQL 203
Query: 186 M 186
+
Sbjct: 204 L 204
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 147 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 195
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGF+TF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGR 56
D+ + HRG GFITF + D VE + + HE+ V +A PKE F P R
Sbjct: 144 DKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 32 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 88 ----------------------------------------KKIFVGGLSANTVVEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 108 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 167
Query: 178 DAGP 181
P
Sbjct: 168 VMFP 171
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V ++
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 160 SHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 HHELDSKTIDPKVAFP 76
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 122 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 172
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGF+TF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGR 56
D+ + HRG GFITF + D VE + + HE+ V +A PKE F P R
Sbjct: 144 DKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+A VE ++ HEL T+ A P+ + V R
Sbjct: 55 RDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 111 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 131 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPS 182
P+
Sbjct: 191 VMTPT 195
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 53 RDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPA 193
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF ++G + + V P RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|380492932|emb|CCF34246.1| nuclear polyadenylated RNA-binding protein [Colletotrichum
higginsianum]
Length = 448
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDSSTGRSRGFGFLTFRDPKTVNIVMVKEHFLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T ++ + YF
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQETTDQEFKDYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + S EI G+ + + A P
Sbjct: 104 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSTSLEIHGKPIEVKKAQP 159
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + LR YFS+FG +++ V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HFLDGKIIDPKRAIPRDE 78
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+A VE ++ HEL T+ A P+ + V R
Sbjct: 55 RDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 111 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 131 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPS 182
P+
Sbjct: 191 VMTPT 195
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+A VE ++ HEL T+ A P+ + V R
Sbjct: 55 RDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 111 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 131 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPS 182
P+
Sbjct: 191 VMTPT 195
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ F+ ++ ++ + H + V V RA +E+ + G G N S
Sbjct: 47 RGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREE------QQVSGRTGNLNTSRS 100
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
+ G Y + KKIFVG LP T E+ R+YF +G + D
Sbjct: 101 SG---------------GDAYNKT-------KKIFVGGLPPTLTDEEFRQYFEVYGPVTD 138
Query: 131 V---YVPKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
V Y RGFGFV+F E D V ++ H++ G+QV + A P D
Sbjct: 139 VAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKD 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + LR +F+ +G + V K TG RGFGFV F++ V DRV +
Sbjct: 7 KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66
Query: 160 SHEICGQQVAIDSA 173
H I ++V + A
Sbjct: 67 KHSIDTREVDVKRA 80
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ + RG GF++F S D+V++++ T H+L G V V RA PK+
Sbjct: 144 DQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKD 189
>gi|168000120|ref|XP_001752764.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695927|gb|EDQ82268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 48/171 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+TFA D + +++D H + G TV ++ P+E+
Sbjct: 34 KDRSTGHPRGFGFVTFADPDVCDKVVLDKHVIDGRTVEAKKSVPREN------------- 80
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A P KKIFVG +P T E+ + YF
Sbjct: 81 ------------LATSKGPKT------------------KKIFVGGIPPSITDEEFKSYF 110
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTF-AEEVVADRVSR-RSHEICGQQV 168
+ FG +++ + TG RGFGFVTF +E+VV D ++ + HE+ G+QV
Sbjct: 111 AGFGSVMEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKLHELAGKQV 161
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L + + ++L+ +F ++G I+D + K TGH RGFGFVTFA+ V D+V
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPDVCDKVVLD 61
Query: 160 SHEICGQQVAIDSATPLDDAGPSQ 183
H I G+ V + P ++ S+
Sbjct: 62 KHVIDGRTVEAKKSVPRENLATSK 85
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 53 RDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPA 193
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF ++G + + V P RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 53 RDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 129 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPA 193
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF ++G + + V P RGFGFVTF ++ D+V ++
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQ 80
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 81 TRHELDSKTIDPKVAFP 97
>gi|357631285|gb|EHJ78874.1| TAR DNA binding protein-like protein [Danaus plexippus]
Length = 305
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR + TA+DLR YF FG++ DV+VPK R F FVTF + VA + + H
Sbjct: 176 RKVFVGRCTESLTADDLREYFGAFGQVTDVFVPK--PFRAFSFVTFLDPEVAQSLCGQDH 233
Query: 162 EICGQQVAIDSATP 175
I G V I +A+P
Sbjct: 234 VIKGVSVNISTASP 247
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 99 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADR 155
R I +G LP + E +R YFS FG +L V V + T +GFGF+ FAE R
Sbjct: 89 RCSDLIVLG-LPWKTGEETVREYFSTFGDLLMVQVKRDTKTGLSKGFGFIKFAEYDAQLR 147
Query: 156 VSRRSHEICGQQVAI 170
R H I G+ +
Sbjct: 148 ALGRRHMIDGRWCDV 162
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 50/184 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 73 KDPMTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPK-------------- 118
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R + + R KKIFVG + Q+ ++++++ Y
Sbjct: 119 ------------------------------NRAKQANRT-KKIFVGGVSQDTSSDEVKAY 147
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F++FG++ + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 148 FNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 207
Query: 178 DAGP 181
P
Sbjct: 208 AVQP 211
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF+ FG + DV + P RGFGF+TFAE D+V +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 160 S-HEICGQQVAIDSATPLDDA 179
H + G+++ ATP + A
Sbjct: 101 PIHTLDGKKIDPKHATPKNRA 121
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 159 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 207
>gi|357619642|gb|EHJ72132.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 307
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ + H++ G V RA P+E+ RP
Sbjct: 57 KDPQTKRSRGFGFITYSRAHMVDDAQKNRPHKIDGRIVEPKRAVPREEIKRP-------- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
++S + KK+F+G + Q+ EDLR Y
Sbjct: 109 ---------------------------------DASATV-KKLFIGGIKQDIEEEDLREY 134
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSRR-SHEICGQQVAIDSA 173
FS+FG I+ V + K TG RGFGF+ F + DR+ + SH++ G+++ + A
Sbjct: 135 FSKFGEIISVSLVTEKDTGKKRGFGFIEFDDYDPVDRICLQPSHKVKGRRLDVKKA 190
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T L+ ++ ++G I+DV V P+ RGFGF+T++ +V D
Sbjct: 24 RKLFIGGLDYCTTDTSLKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMVDDAQK 83
Query: 158 RRSHEICGQQVAIDSATPLDD 178
R H+I G+ V A P ++
Sbjct: 84 NRPHKIDGRIVEPKRAVPREE 104
>gi|315050188|ref|XP_003174468.1| hypothetical protein MGYG_08958 [Arthroderma gypseum CBS 118893]
gi|311339783|gb|EFQ98985.1| hypothetical protein MGYG_08958 [Arthroderma gypseum CBS 118893]
Length = 552
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 73/176 (41%), Gaps = 30/176 (17%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D S RG GF+TF +V +MV H L G V + P GY
Sbjct: 74 RDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKIVWL----------APSISGPLLGY 123
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A Y R Q KIFVG + QEAT ++ +++F
Sbjct: 124 FADREYKIDPKRAIP-----------------RDEQERTSKIFVGGVSQEATEQEFKQFF 166
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+FGR++D + + K TG RGFGFVTF E + EI G+ + + A P
Sbjct: 167 MQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQP 222
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 103/246 (41%), Gaps = 61/246 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT+A+A V++ H++ G TV RA PK D
Sbjct: 41 KDPQTKRSRGFGFITYAAAHMVDDAQGARPHKIDGRTVEPKRAVPKTD------------ 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G+ E+ + KK+FVG L T EDL+ Y
Sbjct: 89 -----------------------------IGKPEAGATV-KKLFVGLLNDSITEEDLKEY 118
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRVSRR-SHEICGQQVAIDSATPLD 177
FS +G + + V K TG RGFGFV F + D++ + SH I G+++ + A +
Sbjct: 119 FSPYGNVTSAALVVHKETGKKRGFGFVEFDDYDPVDKICLKGSHIIKGKKIDVKKALSKE 178
Query: 178 D-AGPSQNFMMNAAETFG-----GYGGPMRTYGRMYG---SLDFDDWGYGMGS-----GR 223
+ A + N+A+ +G + MR +GR G D D W G S G
Sbjct: 179 EMARVNARNNSNSADNWGSDNRNAWEPTMRNFGRGGGWRSGNDPDPWESGPSSRGGNWGG 238
Query: 224 PSRGDW 229
PS W
Sbjct: 239 PSTSAW 244
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVS 157
+K+FVG L + T E+L++YF ++G I+DV V P+ RGFGF+T+ A +V D
Sbjct: 8 RKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMVDDAQG 67
Query: 158 RRSHEICGQQVAIDSATPLDDAG 180
R H+I G+ V A P D G
Sbjct: 68 ARPHKIDGRTVEPKRAVPKTDIG 90
>gi|242053621|ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
gi|241927931|gb|EES01076.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
Length = 349
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 50/179 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GFITFA V+ ++ D H + G V + R PK
Sbjct: 47 KDRYTQKPRGFGFITFADPAVVDRVIEDEHVINGKLVEIKRTIPK--------------- 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA L D KKIFVG LP ++ + +F
Sbjct: 92 ----------------GAAPLKDFKT-------------KKIFVGGLPSALKEDEFKEFF 122
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH--EICGQQVAIDSATP 175
S+FG++++ + + RGFGF+ F AE+ V D ++++ + ++ G QV I A P
Sbjct: 123 SKFGKVVEHEIIRDHTTNRSRGFGFIVFDAEKTVDDLLAKKGNMIDLNGSQVEIKKAEP 181
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ + + +F ++G I+D + K RGFGF+TFA+ V DRV
Sbjct: 15 KIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDRVIED 74
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
H I G+ V I P A P ++F
Sbjct: 75 EHVINGKLVEIKRTIP-KGAAPLKDF 99
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 77/184 (41%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GF+TFA A SV+ ++ HEL G + A P+
Sbjct: 35 KDPTTRRSRGFGFVTFADAASVDKVLASAPHELDGKKIDPKVAFPR-------------- 80
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+ TR KKIFVG L +T +D++ Y
Sbjct: 81 ----RAHPKMVTR--------------------------TKKIFVGGLSAPSTVDDVKGY 110
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FGR+ D + K+T HRGF FVTF E V D+V HEI + V A P +
Sbjct: 111 FEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPKE 170
Query: 178 DAGP 181
P
Sbjct: 171 VMLP 174
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
+K+F+G L + +AE LR YFS+FG + +V V P RGFGFVTFA+ D+V +
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 158 RRSHEICGQQVAIDSATP 175
HE+ G+++ A P
Sbjct: 62 SAPHELDGKKIDPKVAFP 79
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGF+TF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GFITF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++
Sbjct: 160 RGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE--------------------- 198
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + QE T ++ + +F++FGR++D
Sbjct: 199 ---------------------------QEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVD 231
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 232 ATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLEIHGKLIEVKKAQP 279
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFA 148
GRG +S+ GK +F+G L E T E LR YFS+FG +++ V + TG RGFGF+TF
Sbjct: 110 GRGPNSKEDGK-MFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFK 168
Query: 149 EEVVADRVSRRSHEICGQQVAIDSATPLDD 178
+ + V + H + G+ + A P D+
Sbjct: 169 DPKTVNIVMVKEHYLDGKIIDPKRAIPRDE 198
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +V+ ++ V H L G + ATPK RP
Sbjct: 259 KDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 307
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +A++++ Y
Sbjct: 308 ------------RQA----------------------NKTKKIFVGGVSQDTSADEVKAY 333
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 334 FSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 393
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 394 AVTPAAQLL 402
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E L+ YF+ FG + DV + P RGFGF+TF E D+V +
Sbjct: 227 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 286
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 287 PIHTLDGKKIDPKHATP 303
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 345 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 393
>gi|289741549|gb|ADD19522.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 531
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ A+DL+ YFS+FG + DV++PK R F FVTF + VA +
Sbjct: 188 NQVPCKVFVGRCTEDMNADDLKDYFSKFGEVTDVFIPKP--FRAFSFVTFLDPEVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATP 175
H I G V + +A P
Sbjct: 246 GEDHIIKGISVHVSNAAP 263
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R ES R I +G LP + T + LR YF +G +L + K ++G +GFGFV F
Sbjct: 99 RIESRPRCTDLIVLG-LPWKTTEDSLRSYFETYGEVLMTQIKKDMKSGQSKGFGFVRFGS 157
Query: 150 EVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAE 191
V RV H I G+ +V + ++ + + P + F+ E
Sbjct: 158 YDVQVRVLSTRHLIDGRWCEVKVPNSKGMVNQVPCKVFVGRCTE 201
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 50/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+DQ +K RG GFITF SVE ++ HEL + A PK
Sbjct: 54 RDQATKRSRGFGFITFRDPASVEKVLAQAAHELDQKKIDPKVAFPK-------------- 99
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R KKIFVG L TA+D++ +
Sbjct: 100 -------------------------------RSHPKVTRTKKIFVGGLSANTTADDIKNH 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS++G++ + + K+T HRGFGFVTF E V D++ HE+ + V A P +
Sbjct: 129 FSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICEIHFHEVNSKMVECKKAQPKE 188
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T + LR YFS+FG + + V + RGFGF+TF + ++V ++
Sbjct: 22 KMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLAQ 81
Query: 159 RSHEICGQQVAIDSATP 175
+HE+ +++ A P
Sbjct: 82 AAHELDQKKIDPKVAFP 98
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFR 52
D+ + HRG GF+TF S D V+ + + HE+ V +A PKE F+
Sbjct: 143 DKQTNRHRGFGFVTFDSEDVVDKICEIHFHEVNSKMVECKKAQPKEVMFQ 192
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 48/180 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA V ++ + H+L G T+ PK + R + + GG
Sbjct: 46 KNSESGRSRGFGFVTFAEPSLVNVVLQNGPHQLDGRTI-----DPKPCNPRTLQKPKRGG 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P K+F+G LP T DLR +
Sbjct: 101 -----------------GYP---------------------KVFLGGLPSNITETDLRVF 122
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G++++V Y ++ RGFGF++F +E+ +RV++ + G+QV I A P D
Sbjct: 123 FGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPRD 182
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E + E+L+RYFSR+G ++D V K + RGFGFVTFAE + + V +
Sbjct: 14 KLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVNVVLQN 73
Query: 160 -SHEICGQQVAIDSATP 175
H++ G+ + P
Sbjct: 74 GPHQLDGRTIDPKPCNP 90
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTR----- 104
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 105 ---------------------------------------TKKIFVGGLSANTVVEDVKQY 125
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 185
Query: 178 DAGP 181
P
Sbjct: 186 VMFP 189
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V ++
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 190
>gi|328723854|ref|XP_001948745.2| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Acyrthosiphon
pisum]
Length = 377
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 87 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVT 146
P S G G + K+FVGR+ ++ TA+D+R YFS+FG +++V+VPK RGF FVT
Sbjct: 165 PKSKEGNGSE---LSGKVFVGRVTEDLTADDIREYFSKFGEVINVFVPK-NPFRGFAFVT 220
Query: 147 FAEEVVADRVSRRSHEICGQQVAIDSATP 175
F + VA + H + V + A P
Sbjct: 221 FLDPEVAASLCGEDHIVKDVSVRVSEAAP 249
>gi|330799537|ref|XP_003287800.1| hypothetical protein DICPUDRAFT_78661 [Dictyostelium purpureum]
gi|325082176|gb|EGC35667.1| hypothetical protein DICPUDRAFT_78661 [Dictyostelium purpureum]
Length = 557
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 47/168 (27%)
Query: 5 QGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGA 64
+ S RG GF+TFA ++++ H + G V + +A PKED
Sbjct: 143 EKSNKSRGFGFVTFADPTVIDSIFYLEHLIEGKRVEIRKAIPKED--------------- 187
Query: 65 YNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSR 124
+ + P +K+FVG LP+ T +D + YFS
Sbjct: 188 ------------------MIEEPKK------------QKLFVGGLPKHTTPDDFKSYFSD 217
Query: 125 FGRIL--DVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAI 170
+G +L ++ K +GFGFV F +E + + V +H I G++V +
Sbjct: 218 YGEVLEYNLLTEKNGSVKGFGFVCFKDENINETVLNETHFILGKRVDV 265
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH----RGFGFVTFAEEVVADRVSR 158
KIFVG L + + E LR YFS FG + + V K T RGFGFVTFA+ V D +
Sbjct: 108 KIFVGGLLKTTSNESLRDYFSEFGVVKESIVIKATEKSNKSRGFGFVTFADPTVIDSIFY 167
Query: 159 RSHEICGQQVAIDSATPLDD 178
H I G++V I A P +D
Sbjct: 168 LEHLIEGKRVEIRKAIPKED 187
>gi|297604415|ref|NP_001055379.2| Os05g0376000 [Oryza sativa Japonica Group]
gi|255676318|dbj|BAF17293.2| Os05g0376000 [Oryza sativa Japonica Group]
Length = 345
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 47 KEDDFR-PVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGR---GESSQRIGK 102
K++D R P R+ GGYGAYNAYI+AATRYAALG PT YDHPG YG S + +G+
Sbjct: 207 KDEDVRHPPRRVVQGGYGAYNAYITAATRYAALGTPTSYDHPGPAYGNRVAQRSHEILGQ 266
Query: 103 KIFV 106
++ V
Sbjct: 267 EVAV 270
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Query: 154 DRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG--GPMRTYGRMYGSLD 211
+RV++RSHEI GQ+VA+D+A PL+ G S + AE +G YG G + YGR GSL
Sbjct: 254 NRVAQRSHEILGQEVAVDTAEPLE--GGSGGGYLEPAEAYGPYGAYGSLLPYGRFSGSLG 311
Query: 212 FDDWGYG-MGSGRPSRGDWRYRPY 234
+ D+GYG G+ SR + RYRP+
Sbjct: 312 Y-DYGYGPSGNSSRSRPESRYRPF 334
>gi|112983234|ref|NP_001037606.1| TAR DNA binding protein homolog [Bombyx mori]
gi|95115208|gb|ABF55970.1| TBPH [Bombyx mori]
Length = 286
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR + TAEDLR YF FG++ DV+VP+ R F FVTF + VA + + H
Sbjct: 173 RKVFVGRCTENITAEDLREYFGSFGQVTDVFVPR--PFRAFSFVTFLDPEVARSLCGQDH 230
Query: 162 EICGQQVAIDSATP 175
I G V I +A+P
Sbjct: 231 IIKGVSVNISTASP 244
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 91 YGRGESSQ---RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTG-HRGFGF 144
+ R ES R I +G LP + T E +R YFS FG +L V V + RTG +GFGF
Sbjct: 75 FPRAESPPPRPRCSDLIVLG-LPWKTTEEAVRDYFSSFGDLLMVQVKRDTRTGLSKGFGF 133
Query: 145 VTFAEEVVADRVSRRSHEICGQQVAI 170
+ FAE R R H I G+ +
Sbjct: 134 IKFAEYEAQLRALGRRHMIDGRWCDV 159
>gi|328723850|ref|XP_003247957.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Acyrthosiphon
pisum]
gi|328723852|ref|XP_003247958.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Acyrthosiphon
pisum]
Length = 392
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 87 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVT 146
P S G G + K+FVGR+ ++ TA+D+R YFS+FG +++V+VPK RGF FVT
Sbjct: 180 PKSKEGNG---SELSGKVFVGRVTEDLTADDIREYFSKFGEVINVFVPK-NPFRGFAFVT 235
Query: 147 FAEEVVADRVSRRSHEICGQQVAIDSATP 175
F + VA + H + V + A P
Sbjct: 236 FLDPEVAASLCGEDHIVKDVSVRVSEAAP 264
>gi|358388987|gb|EHK26580.1| hypothetical protein TRIVIDRAFT_77860 [Trichoderma virens Gv29-8]
Length = 525
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 43/177 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTV-VVDRATPKEDDFRPVGRMSHGG 61
+D S RG GF+TF +V +MV H L G V ++ P D R + R
Sbjct: 145 RDSSSGRSRGFGFLTFKDPKTVNIVMVKEHFLDGKIVSLLPCHNPCIDPKRAIPR----- 199
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
Q KIFVG + Q+ T ++ R Y
Sbjct: 200 ----------------------------------DEQEKTSKIFVGGVSQDTTDQEFREY 225
Query: 122 FSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
F++FGR++D + + K TG RGFGFVTF E D EI G+ + + A P
Sbjct: 226 FAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLEIHGKPIEVKKAQP 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG +++ V + + RGFGF+TF + + V +
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK 172
Query: 160 SHEICGQQVAI 170
H + G+ V++
Sbjct: 173 EHFLDGKIVSL 183
>gi|242018680|ref|XP_002429802.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212514814|gb|EEB17064.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 486
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 49/181 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S+ RG GFIT++ A V++ M + H + G V RA P++
Sbjct: 61 KDPKSRRSRGFGFITYSKASMVDDAMNNRPHIIDGRQVEPKRAVPRD------------- 107
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R E++ R K+F+G + + T +DL Y
Sbjct: 108 ----------------------------LCSRSEANVR---KLFIGGIGKAVTKDDLEEY 136
Query: 122 FSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F ++GR+ D + V K TG RGFGFV + + AD+V R HEI G+ V I A D
Sbjct: 137 FQKYGRLTDCAIVVTKDTGEPRGFGFVEYEDVDSADKVILIRDHEIKGRHVEIKKAVARD 196
Query: 178 D 178
+
Sbjct: 197 E 197
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFG---RILDVYVPKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T + L+ ++ ++G ++ + PK RGFGF+T+++ +V D ++
Sbjct: 28 RKMFIGGLDYSTTDDGLKEFYEKWGMVVDVVVMKDPKSRRSRGFGFITYSKASMVDDAMN 87
Query: 158 RRSHEICGQQVAIDSATPLD 177
R H I G+QV A P D
Sbjct: 88 NRPHIIDGRQVEPKRAVPRD 107
>gi|168041315|ref|XP_001773137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675496|gb|EDQ61990.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 199
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 48/173 (27%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ + RG GF+TFA +N+++D H + G TV ++ P+E+
Sbjct: 32 IMKDRSTGHPRGFGFVTFADPAVCDNVVLDKHVIDGRTVEAKKSVPREN----------- 80
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
AA P KKIFVG +P T E+ +
Sbjct: 81 --------------MAASKGPKT------------------KKIFVGGIPPSITDEEFKS 108
Query: 121 YFSRFGRILD--VYVPKRTGH-RGFGFVTF-AEEVVADRVSR-RSHEICGQQV 168
YF+ FG +++ + TG RGFGFVTF +E+VV D ++ + HE+ G+QV
Sbjct: 109 YFASFGSVVEHQIMQDHSTGRSRGFGFVTFDSEQVVEDILAHGKMHELGGKQV 161
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L + + ++L+ +F ++G I+D + K TGH RGFGFVTFA+ V D V
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVLD 61
Query: 160 SHEICGQQVAIDSATPLDDAGPSQ 183
H I G+ V + P ++ S+
Sbjct: 62 KHVIDGRTVEAKKSVPRENMAASK 85
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 73/177 (41%), Gaps = 52/177 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF + V +M H L G + RA P+E+
Sbjct: 196 RDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIIDPKRAIPREE------------- 242
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q K+FVG +P + T E+ R +F
Sbjct: 243 -----------------------------------QEKTAKMFVGGVPGDCTEEEFRNFF 267
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEE-VVADRVSRRSHEICGQQVAIDSATP 175
++FGR+LD + + K TG RGFGFVT+ E V +S+ I G+ V + ATP
Sbjct: 268 NQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATP 324
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YF +FG +LD V + + RGFGF+TF + V +
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P ++
Sbjct: 224 EHHLDGKIIDPKRAIPREE 242
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 60/230 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+ V+ ++ + H + V + R PK
Sbjct: 48 KDRHTGRPRGFGFITYEDPSVVDTVIAENHIINDKQVEIKRTIPK--------------- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G ES KKIFVG +P T ++ + +F
Sbjct: 93 -----------------------------GSAESKDFKTKKIFVGGIPTTMTEDEFKNFF 123
Query: 123 SRFGRILDV-----YVPKRTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
S+FG++ + +V KR+ RGFGF+ F E V D + + ++ G QV I A P
Sbjct: 124 SKFGKVTEYEIIRDHVSKRS--RGFGFIVFDNEQVVDNLLAEGNRTDMMGTQVEIKKAEP 181
Query: 176 LDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGYGMGSGRPS 225
+ P+ +A +G R YG YG G+G GS P+
Sbjct: 182 KKPSNPA------SAPAYGS-DSRGRGYGDSYGGFGNSYSGFGSGSFGPA 224
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T E +YF ++G I+D + K TG RGFGF+T+ + V D V
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
Query: 160 SHEICGQQVAIDSATPLDDA 179
+H I +QV I P A
Sbjct: 76 NHIINDKQVEIKRTIPKGSA 95
>gi|328783731|ref|XP_623522.3| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform 2
[Apis mellifera]
Length = 486
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 75/191 (39%), Gaps = 50/191 (26%)
Query: 11 RGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
+G GFITFA SV+ ++ HEL G + A P+ + V R
Sbjct: 139 KGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRT------------ 186
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
KKIFVG L T ED++ YF +FG I
Sbjct: 187 --------------------------------KKIFVGGLSAPTTLEDVKNYFEQFGPIE 214
Query: 130 DVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDDAGPSQNF 185
D + K+T HRGFGFVTF E V D+V HEI + V A P + P+ N
Sbjct: 215 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPA-NL 273
Query: 186 MMNAAETFGGY 196
A G Y
Sbjct: 274 AKTRAANRGAY 284
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D V+ + + HE+ V +A PKE
Sbjct: 221 DKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 266
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++
Sbjct: 224 RGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE--------------------- 262
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + QE T ++ + +F++FGR++D
Sbjct: 263 ---------------------------QEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVD 295
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E + R EI G+ + + A P
Sbjct: 296 ATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLEIHGKLIEVKKAQP 343
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E LR YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 184 KMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMVK 243
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 244 EHYLDGKIIDPKRAIPRDE 262
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGF+TF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V +++ HE+ + + A P
Sbjct: 71 DAASVDKVLAQQHHELDSKTIDPKVAFP 98
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GFITF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|363741379|ref|XP_415912.3| PREDICTED: RNA-binding protein Musashi homolog 2 [Gallus gallus]
Length = 315
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 41 RDPTTKRSRGFGFVTFADPGSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 96
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 97 ----------------------------------------KKIFVGGLSANTVVEDVKQY 116
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 117 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 176
Query: 178 DAGP 181
P
Sbjct: 177 VMFP 180
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 131 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 181
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G +Q K+F+G L + + + LR YF +FG I + V P RGFGFVTFA
Sbjct: 11 GSPSDAQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V ++ HE+ + + A P
Sbjct: 71 DPASVDKVLAQPHHELDSKTIDPKVAFP 98
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|442761931|gb|JAA73124.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Ixodes ricinus]
Length = 227
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KK+FVG L T ED++ YF +FGRI D + K+T HRGFGFVTF E VAD+V
Sbjct: 15 KKVFVGGLSAPRTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVADKVCE 74
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 75 IHFHEINNKMVECKKAQPKEVMMPN 99
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTR----- 104
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 105 ---------------------------------------TKKIFVGGLSANTVVEDVKQY 125
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 185
Query: 178 DAGP 181
P
Sbjct: 186 VMFP 189
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V ++
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 190
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+A VE ++ HEL T+ A P+ + V R
Sbjct: 55 RDPVTKRSRGFGFVTYAEQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 111 ----------------------------------------KKIFVGGLSVNTTIEDVKHY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 131 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPS 182
P+
Sbjct: 191 VMTPT 195
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVT+AE+ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|224126191|ref|XP_002329613.1| predicted protein [Populus trichocarpa]
gi|222870352|gb|EEF07483.1| predicted protein [Populus trichocarpa]
Length = 166
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 49/175 (28%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYG 63
D+ S RG GF+TFA + ++ + H + G V V R P+ED V R
Sbjct: 34 DRHSGRPRGFGFVTFADPVVADRVLEEDHVIDGRAVEVKRTVPREDMEVRVTRT------ 87
Query: 64 AYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFS 123
KKIFVG +P T ++L+ YFS
Sbjct: 88 --------------------------------------KKIFVGGIPPSLTEDELKEYFS 109
Query: 124 RFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSA 173
+G I+D + + +TG RGFGFVTF E +R+ R+HE+ G+QV SA
Sbjct: 110 VYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGKQVGYSSA 164
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E T E YFS++G ++D + + +G RGFGFVTFA+ VVADRV
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEE 60
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P +D
Sbjct: 61 DHVIDGRAVEVKRTVPRED 79
>gi|307170451|gb|EFN62721.1| Heterogeneous nuclear ribonucleoprotein 27C [Camponotus floridanus]
Length = 275
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 48/182 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TF+ +V ++ + H+L G T+ PK + R + + G
Sbjct: 2 KNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTI-----DPKPCNPRTLQKPKRSG 56
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P K+F+G LP T DLR Y
Sbjct: 57 -----------------GFP---------------------KVFLGGLPSNVTETDLRSY 78
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F+RFG++++V Y ++ RGFGF++F +E DR V+ + G+QV I A P D
Sbjct: 79 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEPRD 138
Query: 178 DA 179
+
Sbjct: 139 SS 140
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 52/177 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+E+
Sbjct: 32 RDSSTGRSRGFGFLTFKDPKCVNTVMVKEHYLDGKIIDPKRAIPREE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q K+FVG + Q+ T ++ R +F
Sbjct: 79 -----------------------------------QEKTAKMFVGGVSQDCTEDEFREFF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
S FGR++D + + K TG RGFGFVTF ++ V + +S+ I +Q+ + ATP
Sbjct: 104 SAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEVKRATP 160
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS 160
+F+G L E T E LR YF +FG + + V + + RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P ++
Sbjct: 61 HYLDGKIIDPKRAIPREE 78
>gi|414868392|tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
Length = 348
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 50/179 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GFITFA V+ ++ D H + G V + R PK
Sbjct: 47 KDRYTQKPRGFGFITFADPTVVDRVIEDEHVINGKPVEIKRTIPK--------------- 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA L D KKIFVG LP ++ + +F
Sbjct: 92 ----------------GAAPLKDFKT-------------KKIFVGGLPSALKEDEFKEFF 122
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTF-AEEVVADRVSRRSH--EICGQQVAIDSATP 175
S+FG++++ + + RGFGF+ F AE+ V D + ++ + ++ G QV I A P
Sbjct: 123 SKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLHKKGNMIDLNGSQVEIKKAEP 181
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ + + +F ++G I+D + K RGFGF+TFA+ V DRV
Sbjct: 15 KIFIGGLSKDTSMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDRVIED 74
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
H I G+ V I P A P ++F
Sbjct: 75 EHVINGKPVEIKRTIP-KGAAPLKDF 99
>gi|307214018|gb|EFN89225.1| Heterogeneous nuclear ribonucleoprotein 27C [Harpegnathos saltator]
Length = 263
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 48/182 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TF+ +V ++ + H+L G T+ PK + R + + G
Sbjct: 2 KNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTI-----DPKPCNPRTLQKPKRSG 56
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P K+F+G LP T DLR Y
Sbjct: 57 -----------------GFP---------------------KVFLGGLPSNVTETDLRSY 78
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F+RFG++++V Y ++ RGFGF++F +E DR V+ + G+QV I A P D
Sbjct: 79 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEPRD 138
Query: 178 DA 179
+
Sbjct: 139 SS 140
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEE 150
G+S KK+FVG L + E LR Y+S++G I DV V P+ RGFGFVTF E
Sbjct: 5 GDSKADQDKKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEA 64
Query: 151 VVADRV-SRRSHEICGQQVAIDSATPLDDAGP 181
D+ + R H++ G++V A P ++ P
Sbjct: 65 ASVDKAQANRPHKLDGKEVDSKRAMPREETSP 96
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 71/176 (40%), Gaps = 48/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S RG GF+TF A SV+ + H+L G V RA P+E+
Sbjct: 46 KDPRSNKSRGFGFVTFKEAASVDKAQANRPHKLDGKEVDSKRAMPREE------------ 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
++ +AA+ KKIFVG L ++ T +DL Y
Sbjct: 94 --------TSPEVHAAV-----------------------KKIFVGGLKKDVTNDDLAEY 122
Query: 122 FSRFGRILD---VYVPKRTGHRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
F ++G + D V RGF FVTF + D+V R H I G + + A
Sbjct: 123 FGQYGTVTDAQIVMAKDTNTSRGFAFVTFDDTDSVDKVILARPHTINGHKADVRKA 178
>gi|302142161|emb|CBI19364.3| unnamed protein product [Vitis vinifera]
Length = 377
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 74/179 (41%), Gaps = 45/179 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT--HELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+D G G GF+TFA A S+ + D H + G V V RA K G+ +
Sbjct: 38 RDSGRTPRGGFGFVTFADAASLSRALQDQQQHFIQGQRVEVKRAMNK-------GQRNLD 90
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G G N KKIFVG L T E+ +
Sbjct: 91 GSGNNNF--------------------------------TSKKIFVGGLSSNLTEEEFKN 118
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
YF RFGRI DV V + RGFGF+TF +EE V + +E+ G++V + A P
Sbjct: 119 YFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVP 177
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRV--S 157
K+FVG + T LR YFS++G +++ Y+ + RT GFGFVTFA+ R
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 158 RRSHEICGQQVAIDSA 173
++ H I GQ+V + A
Sbjct: 66 QQQHFIQGQRVEVKRA 81
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFITF S +SVE++M + +EL G V V RA PKE
Sbjct: 134 DSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPKE 179
>gi|195431559|ref|XP_002063804.1| GK15864 [Drosophila willistoni]
gi|194159889|gb|EDW74790.1| GK15864 [Drosophila willistoni]
Length = 556
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFLDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + + Q++ N +FG
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQNRNHQGQSYNYNTGNSFG 285
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G LP + T + LR YF FG +L + K ++G +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEDSLREYFESFGEVLMAQIKKDVKSGQSKGFGFVRFGS 157
Query: 150 EVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAE 191
RV H I G+ +V + ++ + P + F+ E
Sbjct: 158 YEAQMRVLSNRHLIDGRWCEVKVPNSKGMGHQVPCKVFVGRCTE 201
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 50/181 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT--HELGGSTVVVDRATPKEDDFRPVGRMSHG 60
K+ S RG GF+TFA S+ NL++ H+L G T+ PK + R + + G
Sbjct: 40 KNSESGRSRGFGFVTFADP-SLVNLVLQNGPHQLDGRTI-----DPKPCNPRTLQKPKRG 93
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G G P K+F+G LP T DLR
Sbjct: 94 G-----------------GYP---------------------KVFLGGLPSNVTETDLRV 115
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPL 176
+F R+G++++V Y ++ RGFGF++F +E+ +RV++ + G+QV I A P
Sbjct: 116 FFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAEPR 175
Query: 177 D 177
D
Sbjct: 176 D 176
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E + E+L+RYFSR+G ++D V K + RGFGFVTFA+ + + V +
Sbjct: 8 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 67
Query: 160 -SHEICGQQVAIDSATPLDDAGPSQ----------NFMMNAAET-----FGGYGGPM--- 200
H++ G+ + P P + N ET FG YG M
Sbjct: 68 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGKVMEVV 127
Query: 201 ------RTYGRMYGSLDFDD 214
+ R +G L F+D
Sbjct: 128 IMYDQEKKKSRGFGFLSFED 147
>gi|224161731|ref|XP_002338367.1| predicted protein [Populus trichocarpa]
gi|222872031|gb|EEF09162.1| predicted protein [Populus trichocarpa]
Length = 151
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 49/175 (28%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYG 63
D+ S RG GF+TFA + ++ + H + G V V R P+ED V R
Sbjct: 19 DRHSGRPRGFGFVTFADPVVADRVLEEDHVIDGRAVEVKRTVPREDMEVRVTRT------ 72
Query: 64 AYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFS 123
KKIFVG +P T ++L+ YFS
Sbjct: 73 --------------------------------------KKIFVGGIPPSLTEDELKEYFS 94
Query: 124 RFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSA 173
+G I+D + + +TG RGFGFVTF E +R+ R+HE+ G+QV SA
Sbjct: 95 VYGSIVDHQIMLDHKTGRSRGFGFVTFDSEDAVERIFSEGRTHELGGKQVGYSSA 149
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 121 YFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
YFS++G ++D + + +G RGFGFVTFA+ VVADRV H I G+ V + P +
Sbjct: 4 YFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPVVADRVLEEDHVIDGRAVEVKRTVPRE 63
Query: 178 D 178
D
Sbjct: 64 D 64
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 89 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 134
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 135 -----------------GMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELRE 177
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 178 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 237
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ M NAA G G P T+ + YG
Sbjct: 238 DSKSQVPGQPGASQWGSRLMPNAAN--GWAGQPPPTWQQGYG 277
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVS 157
+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 56 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 115
Query: 158 RRSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 116 SRPHTLDGRNIDPKPCTP 133
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 100/248 (40%), Gaps = 75/248 (30%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D SK RG GF+T+A + V+ M H + TV RA P+E
Sbjct: 57 DPYSKRSRGFGFVTYADSQMVDQAMAQRPHIIDNRTVEPKRAIPREQS------------ 104
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G+++ + KK+FVG L E AEDLR YF
Sbjct: 105 ------------------------------SGDTNMSV-KKLFVGGLSTETEAEDLRNYF 133
Query: 123 SRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSAT---- 174
++G I +V + + TG RGFGFVTF + D+V +R H I G++ + A
Sbjct: 134 GKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQRHHMIKGKRTEVKKALSKIE 193
Query: 175 ------------PLDDAGPSQNFMMNAAET--FGGYGGPMRTYGRMYGSLDFDDW-GYGM 219
P ++GPS ++ A GGY R YG D DDW GY
Sbjct: 194 MEKAKRKDSFMGPPHNSGPSHHYRGPPAPPPHRGGYSS--RGYG------DSDDWPGYAW 245
Query: 220 GSGRPSRG 227
G S+G
Sbjct: 246 GGQPQSQG 253
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEE 150
G S +K+F+G L + L+ Y+S++G I+D V P RGFGFVT+A+
Sbjct: 15 GSSEPEYMRKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADS 74
Query: 151 VVADR-VSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG------YGGPMRTY 203
+ D+ +++R H I + V A P + + N M+ + F G +R Y
Sbjct: 75 QMVDQAMAQRPHIIDNRTVEPKRAIPREQSSGDTN--MSVKKLFVGGLSTETEAEDLRNY 132
Query: 204 GRMYGSLD 211
YGS++
Sbjct: 133 FGKYGSIE 140
>gi|149053819|gb|EDM05636.1| similar to RNA-binding protein Musashi2-S (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 296
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 4 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 59
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 60 ----------------------------------------KKIFVGGLSANTVVEDVKQY 79
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 80 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 139
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 94 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 144
>gi|413954078|gb|AFW86727.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 278
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 49/174 (28%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ ++ RG GF+TF+ ++ ++ D H + G TV V R PKE
Sbjct: 124 IMKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVIDGRTVEVKRTVPKE------------ 171
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+ D P + KKIFVG +P T + L+
Sbjct: 172 --------------------LSSKDGPKT------------KKIFVGGIPPSLTEDKLKE 199
Query: 121 YFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVA 169
+FS +G++++ + + TG RGFGFVTF E +RV R H++ G+QV
Sbjct: 200 HFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVT 253
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHR---GFGFVTFAEEVVADRVSRR 159
K+FVG + E T E ++F ++G I D + K R GFGFVTF++ V DRV
Sbjct: 94 KVFVGGVAWETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLED 153
Query: 160 SHEICGQQVAIDSATP 175
H I G+ V + P
Sbjct: 154 EHVIDGRTVEVKRTVP 169
>gi|225458908|ref|XP_002283509.1| PREDICTED: uncharacterized protein LOC100255821 [Vitis vinifera]
Length = 471
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 74/179 (41%), Gaps = 45/179 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT--HELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+D G G GF+TFA A S+ + D H + G V V RA K G+ +
Sbjct: 38 RDSGRTPRGGFGFVTFADAASLSRALQDQQQHFIQGQRVEVKRAMNK-------GQRNLD 90
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G G N KKIFVG L T E+ +
Sbjct: 91 GSGNNNF--------------------------------TSKKIFVGGLSSNLTEEEFKN 118
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
YF RFGRI DV V + RGFGF+TF +EE V + +E+ G++V + A P
Sbjct: 119 YFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVP 177
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRV--S 157
K+FVG + T LR YFS++G +++ Y+ + RT GFGFVTFA+ R
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 158 RRSHEICGQQVAIDSA 173
++ H I GQ+V + A
Sbjct: 66 QQQHFIQGQRVEVKRA 81
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFITF S +SVE++M + +EL G V V RA PKE
Sbjct: 134 DSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPKE 179
>gi|260793326|ref|XP_002591663.1| hypothetical protein BRAFLDRAFT_223429 [Branchiostoma floridae]
gi|229276872|gb|EEN47674.1| hypothetical protein BRAFLDRAFT_223429 [Branchiostoma floridae]
Length = 431
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRR 159
+ +K+F+GR ++ +AEDLR YF +FG + DV++PK R F FVTF + A +
Sbjct: 188 LSRKVFIGRCTEDMSAEDLRAYFQQFGEVTDVFIPKP--FRAFAFVTFQDGETAQNLCGE 245
Query: 160 SHEICGQQVAIDSATP 175
H I G V + +A P
Sbjct: 246 DHIIKGASVHVSNAEP 261
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS 160
+ V LP + T ++LR Y ++G +L V + PK +GFGFV FAE V +V +
Sbjct: 105 LIVLGLPWKTTEQELREYMEQYGEVLMVQIKKDPKTGNSKGFGFVRFAEYEVQLKVMTQR 164
Query: 161 HEICGQQVAI 170
H I G+ +
Sbjct: 165 HMIDGRWCDV 174
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T + R YF
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQETTDHEFREYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 104 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAANLEIHGKPIEVKKAQP 159
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + LR YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|410980705|ref|XP_003996716.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Felis catus]
Length = 333
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 41 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 96
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 97 ----------------------------------------KKIFVGGLSANTVVEDVKQY 116
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 117 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 176
Query: 178 DAGP 181
P
Sbjct: 177 VMFP 180
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 131 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 181
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSA 173
LR YFS+FG I + V P RGFGFVTFA+ D+V + HE+ + + A
Sbjct: 24 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 83
Query: 174 TP 175
P
Sbjct: 84 FP 85
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 32 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 88 ----------------------------------------KKIFVGGLSANTVVEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 108 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 167
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 160 SHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 HHELDSKTIDPKVAFP 76
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 122 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 172
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 52/177 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V+ +M H L G + RA P+E+
Sbjct: 153 RDSTTGRSRGFGFLTFKDPKCVQVVMSKEHHLDGKIIDPKRAIPREE------------- 199
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q K+FVG +P + T E+ R +F
Sbjct: 200 -----------------------------------QEKTAKMFVGGVPADCTEEEFRDFF 224
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEE-VVADRVSRRSHEICGQQVAIDSATP 175
++FGR+LD + + K TG RGFGFVTF E V + +S+ I G+ V + ATP
Sbjct: 225 NQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVEVKRATP 281
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQ----RIGKKIFVGRLPQEATAE 116
G +Y A SA A + AP H E Q R K+F+G L E T E
Sbjct: 76 GDDSYGARQSAEP-TAPVEAPQERQHTEQKPAAQEEQQSPFNREDGKMFIGGLNWETTDE 134
Query: 117 DLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSA 173
LR YF +FG +LD V + + RGFGF+TF + V + H + G+ + A
Sbjct: 135 SLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQVVMSKEHHLDGKIIDPKRA 194
Query: 174 TPLDD 178
P ++
Sbjct: 195 IPREE 199
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|148683899|gb|EDL15846.1| Musashi homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 296
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 4 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 59
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 60 ----------------------------------------KKIFVGGLSANTVVEDVKQY 79
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 80 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 139
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 94 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 144
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 67/168 (39%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++
Sbjct: 163 RGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE--------------------- 201
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + QE T + R YF++FGR++D
Sbjct: 202 ---------------------------QEKTSKIFVGGVSQETTDHEFREYFAQFGRVVD 234
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E + EI G+ + + A P
Sbjct: 235 ATLMMDKDTGRPRGFGFVTFESEAGVEACLAAKLEIHGKPIEVKKAQP 282
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 123 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVK 182
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 183 EHYLDGKIIDPKRAIPRDE 201
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 32 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 88 ----------------------------------------KKIFVGGLSANTVVEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 108 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 167
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 160 SHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 HHELDSKTIDPKVAFP 76
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 122 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 172
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 79/189 (41%), Gaps = 50/189 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF +V+ ++ V H L G + ATPK RP
Sbjct: 232 KDPVTQRSRGFGFITFQEPCTVDKVLKVPIHTLDGKKIDPKHATPKN---RP-------- 280
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R A KKIFVG + Q+ +A++++ Y
Sbjct: 281 ------------RQA----------------------NKTKKIFVGGVSQDTSADEVKAY 306
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS+FG + + + + HRGFGFVTF E V DRV H I ++V A P +
Sbjct: 307 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 366
Query: 178 DAGPSQNFM 186
P+ +
Sbjct: 367 AVTPAAQLL 375
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E L+ YF+ FG + DV + P RGFGF+TF E D+V +
Sbjct: 200 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 160 S-HEICGQQVAIDSATP 175
H + G+++ ATP
Sbjct: 260 PIHTLDGKKIDPKHATP 276
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 318 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 366
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRV 156
+ +KIFVG LP+E T+ ++F +G I D + K +TGH RGFGFVT+A+ V D+V
Sbjct: 4 VCRKIFVGGLPRETTSAQFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKV 63
Query: 157 SRRSHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 64 IEDTHIINGKQVEIKRTIP 82
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 53/180 (29%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ + RG GF+T+A V+ ++ DTH + G V + R PK
Sbjct: 37 IMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPK------------- 83
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR--IGKKIFVGRLPQEATAEDL 118
G SS R KKIFVG +P ++
Sbjct: 84 ---------------------------------GSSSSRDFKTKKIFVGGIPTSVDEDEF 110
Query: 119 RRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSA 173
R +F ++G + + + + + RGFGF+TF E D + + E+ G QV I A
Sbjct: 111 RDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKKA 170
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 51/168 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++
Sbjct: 157 RGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE--------------------- 195
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + Q+ T ++ + +F++FGR++D
Sbjct: 196 ---------------------------QEKTSKIFVGGVSQDTTDQEFKDFFAQFGRVVD 228
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
+ + K TG RGFGFVTF E D + EI G+ + + A P
Sbjct: 229 ATLMMDKDTGRPRGFGFVTFESEAGVDACLAQELEIHGKPIEVKKAQP 276
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
RG +S+ GK +F+G L E T + LR YFS+FG +++ V + TG RGFGF+TF +
Sbjct: 108 RGPNSKEDGK-MFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKD 166
Query: 150 EVVADRVSRRSHEICGQQVAIDSATPLDD 178
+ V + H + G+ + A P D+
Sbjct: 167 PKTVNIVMVKEHYLDGKIIDPKRAIPRDE 195
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 171 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 226
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 227 ----------------------------------------KKIFVGGLSANTVVEDVKQY 246
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 247 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 304
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 110 PQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSH 161
P + A+ LR YFS+FG I + V P RGFGFVTFA+ D+V + H
Sbjct: 146 PSDVPADSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 200
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 261 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 311
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 36/179 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F + ++ + H + G V +A P++D
Sbjct: 22 KDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAKKAVPRDDQ------------ 69
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ + T + G+P G G + +KIFVG L T D ++YF
Sbjct: 70 -----NVLSRTSGSIHGSP----------GPGRT-----RKIFVGGLASTVTESDFKKYF 109
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P +
Sbjct: 110 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPKE 168
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 116 EDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 172
+ LR YFS +G + + + K TG RGFGFV F + VAD V + H I G+ V
Sbjct: 3 DGLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAKK 62
Query: 173 ATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
A P DD QN + + + G GP RT G L
Sbjct: 63 AVPRDD----QNVLSRTSGSIHGSPGPGRTRKIFVGGL 96
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 32 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 88 ----------------------------------------KKIFVGGLSANTVVEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 108 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKMVECKKAQPKE 167
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 160 SHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 HHELDSKTIDPKVAFP 76
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF S D VE + + HE+ V +A PKE F P
Sbjct: 122 DKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 172
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 105
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 106 ----------------------------------------KKIFVGGLSANTVVEDVKQY 125
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 183
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 190
>gi|256080309|ref|XP_002576424.1| tar DNA-binding protein [Schistosoma mansoni]
gi|350645465|emb|CCD59817.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 321
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 95 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPK--PFRSFAFITFDDPEVAASLL 152
Query: 158 RRSHEICGQQVAIDSATP 175
+ EI G ++++ SA P
Sbjct: 153 GKDQEIQGVRISVGSAVP 170
>gi|147795790|emb|CAN67607.1| hypothetical protein VITISV_004303 [Vitis vinifera]
Length = 507
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 74/179 (41%), Gaps = 45/179 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT--HELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+D G G GF+TFA A S+ + D H + G V V RA K G+ +
Sbjct: 38 RDSGRTPRGGFGFVTFADAASLSRALQDQQQHFIQGQRVEVKRAMNK-------GQRNLD 90
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G G N KKIFVG L T E+ +
Sbjct: 91 GSGNNNF--------------------------------TSKKIFVGGLSSNLTEEEFKN 118
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
YF RFGRI DV V + RGFGF+TF +EE V + +E+ G++V + A P
Sbjct: 119 YFERFGRITDVVVMHDSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVP 177
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRV--S 157
K+FVG + T LR YFS++G +++ Y+ + RT GFGFVTFA+ R
Sbjct: 6 KLFVGGVSGAITEGLLRDYFSKYGTVVETYIRRDSGRTPRGGFGFVTFADAASLSRALQD 65
Query: 158 RRSHEICGQQVAIDSA 173
++ H I GQ+V + A
Sbjct: 66 QQQHFIQGQRVEVKRA 81
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFITF S +SVE++M + +EL G V V RA PKE
Sbjct: 134 DSATRRPRGFGFITFESEESVEHVMQNNFYELNGKRVEVKRAVPKE 179
>gi|147789024|emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V++++ DTH + G V + R PK
Sbjct: 37 KDRYTGQPRGFGFVTYADPSVVDSVIEDTHVINGKQVEIKRTIPK--------------- 81
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G G+S KKIFVG LP T ++ + +F
Sbjct: 82 -----------------------------GSGQSKDFKTKKIFVGGLPSTVTEDEFKDFF 112
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
S++G++ + + + RGFGF+ F E V D + + ++ G QV+I +P
Sbjct: 113 SKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVSILQWSP 170
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + K TG RGFGFVT+A+ V D V
Sbjct: 5 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 64
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G+QV I P +G S++F
Sbjct: 65 THVINGKQVEIKRTIP-KGSGQSKDF 89
>gi|291407048|ref|XP_002719860.1| PREDICTED: musashi 1 [Oryctolagus cuniculus]
Length = 568
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA V+ ++ + HEL T+ A P+ + V R
Sbjct: 259 RDPLTKRSRGFGFVTFADQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 314
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 315 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 334
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 335 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 394
Query: 178 DAGPS 182
P+
Sbjct: 395 VMSPT 399
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 114 TAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVA 169
AE LR YF +FG + + V P RGFGFVTFA++ D+V +S HE+ + +
Sbjct: 238 VAEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFADQAGVDKVLAQSRHELDSKTID 297
Query: 170 IDSATP 175
A P
Sbjct: 298 PKVAFP 303
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 71/176 (40%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF +V +MV H L G + RA P+++
Sbjct: 32 RDGATGRSRGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 78
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + QE T + R YF
Sbjct: 79 -----------------------------------QEKTSKIFVGGVSQETTDHEFREYF 103
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++FGR++D + + K TG RGFGFVTF E + + EI G+ + + A P
Sbjct: 104 AQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSANLEIHGKPIEVKKAQP 159
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+F+G L E T + LR YFS+FG +++ V + TG RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 161 HEICGQQVAIDSATPLDD 178
H + G+ + A P D+
Sbjct: 61 HYLDGKIIDPKRAIPRDE 78
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 60 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 105
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 106 -----------------GMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELRE 148
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 149 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 208
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ M NAA G G P T+ + YG
Sbjct: 209 DSKSQVPGQPGASQWGSRLMPNAAN--GWAGQPPPTWQQGYG 248
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE 149
R E + +K+FVG L T E LR YFS++G ++D + K RGFGFV F +
Sbjct: 18 RSERPELKTRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKD 77
Query: 150 -EVVADRVSRRSHEICGQQVAIDSATP 175
V ++ R H + G+ + TP
Sbjct: 78 PNCVGTVLASRPHTLDGRNIDPKPCTP 104
>gi|256080305|ref|XP_002576422.1| tar DNA-binding protein [Schistosoma mansoni]
Length = 446
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPK--PFRSFAFITFDDPEVAASLL 248
Query: 158 RRSHEICGQQVAIDSATP 175
+ EI G ++++ SA P
Sbjct: 249 GKDQEIQGVRISVGSAVP 266
>gi|350645464|emb|CCD59816.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 450
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPK--PFRSFAFITFDDPEVAASLL 248
Query: 158 RRSHEICGQQVAIDSATP 175
+ EI G ++++ SA P
Sbjct: 249 GKDQEIQGVRISVGSAVP 266
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 34 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 89
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 90 ----------------------------------------KKIFVGGLSANTVVEDVKQY 109
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 110 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 169
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 62 PHHELDSKTIDPKVAFP 78
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 124 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 174
>gi|301121326|ref|XP_002908390.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
gi|262103421|gb|EEY61473.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
Length = 632
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 26/202 (12%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S+ RG GFIT+A V+ + H L V RA P+ + R +G +
Sbjct: 41 KDPISRRSRGFGFITYADPLCVDRALAQPNHILDSRRVEAKRAVPRAESMRDIGNSASSS 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ IS+ + +A+GA KKIFVG L E D ++Y
Sbjct: 101 RVNGSTSISSISANSAVGA--------------------TKKIFVGGLHYETKDADFKKY 140
Query: 122 FSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F ++G+++ V + RGFGFV F E + V + ++H I G+ V + A P
Sbjct: 141 FMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQDKNHVIDGKSVEVKRAVPRT 200
Query: 178 DAGPSQNFMMNAAETFGGYGGP 199
D P ++ + + +F G GP
Sbjct: 201 DVPPPRS-VSSRGNSFSGPSGP 221
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADR-VSR 158
KIF+G L E T E LR YF +G + D V P RGFGF+T+A+ + DR +++
Sbjct: 9 KIFIGGLSYETTDEKLRSYFGAYGTVTDAVVMKDPISRRSRGFGFITYADPLCVDRALAQ 68
Query: 159 RSHEICGQQVAIDSATP 175
+H + ++V A P
Sbjct: 69 PNHILDSRRVEAKRAVP 85
>gi|195149343|ref|XP_002015617.1| GL10927 [Drosophila persimilis]
gi|198462059|ref|XP_001352323.2| GA10247 [Drosophila pseudoobscura pseudoobscura]
gi|194109464|gb|EDW31507.1| GL10927 [Drosophila persimilis]
gi|198139765|gb|EAL29286.2| GA10247 [Drosophila pseudoobscura pseudoobscura]
Length = 540
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
++ K+FVGR ++ ++DLR YFS+FG + DV++P+ R F FVTF + VA +
Sbjct: 188 HQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRP--FRAFSFVTFFDPDVAQSLC 245
Query: 158 RRSHEICGQQVAIDSATPLDDAGPS---QNFMMNAAETFG 194
H I G V + +A P + S QN+ ++ ++G
Sbjct: 246 GEDHIIKGVSVHVSNAAPKAEQSRSHQGQNYNYSSGNSYG 285
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G LP + T + LR YF +G +L + K ++G +GFGFV F
Sbjct: 99 RIETRLRCTDLIVLG-LPWKTTEDSLREYFESYGEVLMAQIKKDVKSGQSKGFGFVRFGS 157
Query: 150 EVVADRVSRRSHEICGQQVAI 170
RV H I G+ +
Sbjct: 158 YDAQMRVLSNRHLIDGRWCEV 178
>gi|348041339|ref|NP_001231688.1| TAR DNA-binding protein 43 isoform 3 [Xenopus (Silurana)
tropicalis]
Length = 247
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 29 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 86
Query: 162 EICGQQVAIDSATP 175
I G V + +A P
Sbjct: 87 IIKGVSVHVSTAEP 100
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 54 RDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 189
Query: 178 DAGPS 182
P+
Sbjct: 190 VMSPT 194
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 82 SRHELDSKTIDPKVAFP 98
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 105
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 106 ----------------------------------------KKIFVGGLSANTVVEDVKQY 125
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 183
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 190
>gi|256080303|ref|XP_002576421.1| tar DNA-binding protein [Schistosoma mansoni]
gi|350645466|emb|CCD59818.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 417
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPK--PFRSFAFITFDDPEVAASLL 248
Query: 158 RRSHEICGQQVAIDSATP 175
+ EI G ++++ SA P
Sbjct: 249 GKDQEIQGVRISVGSAVP 266
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 105
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 106 ----------------------------------------KKIFVGGLSANTVVEDVKQY 125
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 183
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 190
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+A VE ++ HEL T+ A P+ + V R
Sbjct: 32 RDPVTKRSRGFGFVTYADQAGVEQVLAQNRHELDSKTIDPKVAFPRRAQPKLVTR----- 86
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 87 ---------------------------------------TKKIFVGGLSVNTTIEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 108 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 167
Query: 178 DAGPS 182
P+
Sbjct: 168 VMTPT 172
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEV-VADRVSRR 159
+F+G L + T E LR YF +FG + + V P RGFGFVT+A++ V +++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Query: 160 SHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 84/211 (39%), Gaps = 48/211 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ + RG GF+TFA ++VE + + H L G T+ P+ +P GG
Sbjct: 51 KNNETGRSRGFGFVTFADPENVERALENGPHTLDGRTIDPKPCNPR-SQHKP---KRTGG 106
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
Y K+F+G LP T DLR +
Sbjct: 107 Y---------------------------------------PKVFLGGLPPNITETDLRSF 127
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
F R+G +++V Y ++ RGFGF++F E +R + I G+QV + A P D
Sbjct: 128 FCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISGKQVEVKKAEPRD 187
Query: 178 DAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
+ N M + +G P G+M G
Sbjct: 188 GNQNNSNSMNTDSYQWGSPQAPPMGNGQMGG 218
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE-EVVADRVSR 158
K+FVG L E + E+L+RYFSR+G ++D V K TG RGFGFVTFA+ E V +
Sbjct: 19 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 78
Query: 159 RSHEICGQQVAIDSATPLDDAGP 181
H + G+ + P P
Sbjct: 79 GPHTLDGRTIDPKPCNPRSQHKP 101
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 73/172 (42%), Gaps = 43/172 (25%)
Query: 11 RGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITFA ++V ++ +T H L T+ P+ + R
Sbjct: 61 RGFGFITFADPNNVGLVLQNTPHILDNRTIDPKPCNPRAEMVR----------------- 103
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
A R G G K+F+G LP T DLR +FS++G++
Sbjct: 104 -APRRSMGTGN--------------------GYKVFLGGLPSNLTETDLRNFFSQYGKVS 142
Query: 130 DV---YVPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
+V Y ++ RGFGF+TF E DR + + I G+QV I A P D
Sbjct: 143 EVVIMYDQEKKKSRGFGFLTFESEESVDRCTGEHYVSINGKQVEIKKAEPRD 194
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
G++S GK +F+G L E T ++L RYFS++G ++D V P+ RGFGF+TFA+
Sbjct: 13 GDNSNEQGK-MFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFAD 70
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S RG GFIT+ + V+ + HE+ G TV RA P+ED P M+
Sbjct: 50 KDSVSHRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSQTPESHMTV-- 107
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KK+FVG L ++ T ++LR Y
Sbjct: 108 ----------------------------------------KKLFVGALKKDVTQDELRDY 127
Query: 122 FSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
FS++G I+D + K TG RGFGFVTF + D+ + + H I + + A
Sbjct: 128 FSKYGNIVDCEIVTWKETGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKKA 183
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRT-GH--RGFGFVTFAE-EVVADRVS 157
+K+F+G L + T L+ ++S++G I+DV V K + H RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPQTTETMLKDFYSQWGEIVDVVVMKDSVSHRSRGFGFITYKEPEMVDAAQA 76
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFM 186
R HEI G+ V A P +D+ ++ M
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSQTPESHM 105
>gi|431914268|gb|ELK15526.1| RNA-binding protein Musashi like protein 1 [Pteropus alecto]
Length = 281
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 2 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 57
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 58 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 77
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 78 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 137
Query: 178 DAGPS 182
P+
Sbjct: 138 VMSPT 142
>gi|47217577|emb|CAG02504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 73/185 (39%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
D S RG GF+TF V+ ++ T HEL T+ A P+ + V R
Sbjct: 15 NDPPSDVCRGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRT---- 70
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 71 ----------------------------------------KKIFVGGLSVNTTIEDVKQY 90
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 91 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 150
Query: 178 DAGPS 182
P+
Sbjct: 151 VMSPA 155
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 33 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 89 ----------------------------------------KKIFVGGLSANTVVEDVKQY 108
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 109 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 168
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 PHHELDSKTIDPKVAFP 77
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 123 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 173
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 36/179 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ F + ++ + H + G V +A P++D
Sbjct: 39 KDRTTGRARGFGFVVFIDPAVADIVVQEKHNIDGRMVEAKKAVPRDDQ------------ 86
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ + T + G+P G G + +KIFVG L T D ++YF
Sbjct: 87 -----NVLSRTSGSIHGSP----------GPGRT-----RKIFVGGLASTVTESDFKKYF 126
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
+FG I DV V RGFGF+T+ E D+V ++ HE+ G+ V + A P +
Sbjct: 127 DQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKRAVPKE 185
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + E LR YFS +G + + + K TG RGFGFV F + VAD V +
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
H I G+ V A P DD QN + + + G GP RT G L
Sbjct: 67 KHNIDGRMVEAKKAVPRDD----QNVLSRTSGSIHGSPGPGRTRKIFVGGL 113
>gi|86824038|gb|AAI05528.1| TAR DNA binding protein [Bos taurus]
Length = 298
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 248 LIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 289
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 32 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 88 ----------------------------------------KKIFVGGLSANTVVEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 108 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 167
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 160 SHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 HHELDSKTIDPKVAFP 76
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 122 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 172
>gi|256080307|ref|XP_002576423.1| tar DNA-binding protein [Schistosoma mansoni]
gi|350645467|emb|CCD59819.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 457
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ +GRL ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 191 QEVSRKVHIGRLTEDISPEALRQHFSQYGRVCDVFIPK--PFRSFAFITFDDPEVAASLL 248
Query: 158 RRSHEICGQQVAIDSATP 175
+ EI G ++++ SA P
Sbjct: 249 GKDQEIQGVRISVGSAVP 266
>gi|56682935|ref|NP_001003898.1| TAR DNA-binding protein 43 isoform 5 [Mus musculus]
gi|26337419|dbj|BAC32395.1| unnamed protein product [Mus musculus]
gi|33086852|gb|AAP92689.1| TARDBP S7 [Mus musculus]
gi|148682888|gb|EDL14835.1| mCG16669, isoform CRA_f [Mus musculus]
gi|257222466|gb|ACV52543.1| TDP-43 variant 5 [Mus musculus]
Length = 298
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 248 LIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 289
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|148682886|gb|EDL14833.1| mCG16669, isoform CRA_d [Mus musculus]
Length = 300
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 192 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 249
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 250 LIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 291
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 103 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 161
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 162 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 188
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 54 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 189
Query: 178 DAGPS 182
P+
Sbjct: 190 VMSPT 194
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 81
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 82 SRHELDSKTIDPKVAFP 98
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F ++G++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YF++FG I + V P RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V ++ HE+ + + A P
Sbjct: 71 DPASVDKVLAQPHHELDSKTIDPKVAFP 98
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 187
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|403222919|dbj|BAM41050.1| DAZ-associated protein 1 [Theileria orientalis strain Shintoku]
Length = 395
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR----TGHRGFGFVTF-AEEVVADRVS 157
+IF+ R+P +AT +DL YF +FG + D Y PK+ T ++GFGF++F +EE +
Sbjct: 115 RIFITRIPFDATKDDLEEYFKKFGTVYDAYCPKQSNYSTLNKGFGFISFDSEETIQKVFE 174
Query: 158 RRSHEICGQQVAIDSAT 174
H I G++V +D AT
Sbjct: 175 TSPHVIMGREVIVDRAT 191
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEV 151
++ +R K+FVGR+ + T + LR YFS+FG ++DVY+P+ +GFGF+TFA +
Sbjct: 305 KTRERNAPKLFVGRIGYDTTVQTLRSYFSQFGDVVDVYIPRDAQTQKSKGFGFLTFANKN 364
Query: 152 VADRVSRRS--HEICGQQVAIDSA 173
V S H + G+ + +D A
Sbjct: 365 SIHTVLDPSLKHVLEGRDIIVDYA 388
>gi|392332125|ref|XP_001081205.3| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 295
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 21 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 76
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 77 ----------------------------------------KKIFVGGLSANTVVEDVKQY 96
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 97 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 156
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 111 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 161
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAID 171
+ LR YFS+FG I + V P RGFGFVTFA+ D+V + HE+ + +
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 61
Query: 172 SATP 175
A P
Sbjct: 62 VAFP 65
>gi|325179628|emb|CCA14026.1| heterogeneous nuclear ribonucleoprotein A1 putative [Albugo
laibachii Nc14]
Length = 618
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 26/184 (14%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S+ RG GFIT+A V+ + +H L V RA P+ D+ R V +
Sbjct: 41 KDPISRRSRGFGFITYADPACVDRALAQPSHVLDSRRVEAKRAVPRADNSREVVSTTIKP 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G + PTL S G ++ KKIFVG L E + ++Y
Sbjct: 101 SG-------------PIVLPTL----NSACASGGAT----KKIFVGGLHYETKDAEFKKY 139
Query: 122 FSRFGRIL--DVYVPKRTGH-RGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSATPLD 177
F ++G+++ +V + T RGFGFV F E D + + R H I G+ V + A P
Sbjct: 140 FQKYGKVVSAEVMFNRETNKSRGFGFVIFENEQSVDLILNERDHMIDGKLVEVKRAVPRT 199
Query: 178 DAGP 181
D P
Sbjct: 200 DVPP 203
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADR-VSR 158
KIF+G L E T E LR YF FG + D V P RGFGF+T+A+ DR +++
Sbjct: 9 KIFIGGLSYETTDEKLRSYFGAFGSVTDAVVMKDPISRRSRGFGFITYADPACVDRALAQ 68
Query: 159 RSHEICGQQVAIDSATPLDD 178
SH + ++V A P D
Sbjct: 69 PSHVLDSRRVEAKRAVPRAD 88
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ DTH + G V + R PK
Sbjct: 52 KDRYTGQPRGFGFITYADPSVVDKVIEDTHVIHGKQVEIKRTIPK--------------- 96
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G G+S KKIFVG +P T ++ + +F
Sbjct: 97 -----------------------------GSGQSKDFKTKKIFVGGIPSSVTEDEFKGFF 127
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATPLD 177
S++G++++ + + RGFGF+ F +EE V + +S + ++ G QV I A P
Sbjct: 128 SKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAEPKK 187
Query: 178 DAGP 181
+ P
Sbjct: 188 ASNP 191
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F R+G I D + K TG RGFGF+T+A+ V D+V
Sbjct: 20 KIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G+QV I P +G S++F
Sbjct: 80 THVIHGKQVEIKRTIP-KGSGQSKDF 104
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 49/187 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPSQN 184
P+ +
Sbjct: 189 VMSPTSS 195
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF ++G + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F ++G++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YF++FG I + V P RGFGFVTFA
Sbjct: 11 GSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V ++ HE+ + + A P
Sbjct: 71 DPASVDKVLAQPHHELDSKTIDPKVAFP 98
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|390463506|ref|XP_002748435.2| PREDICTED: RNA-binding protein Musashi homolog 2, partial
[Callithrix jacchus]
Length = 295
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 21 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 76
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 77 ----------------------------------------KKIFVGGLSANTVVEDVKQY 96
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 97 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 156
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 111 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 161
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAI 170
+ LR YFS+FG I + V P RGFGFVTFA+ D+V + HE+ + +
Sbjct: 1 TDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDP 60
Query: 171 DSATP 175
A P
Sbjct: 61 KVAFP 65
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 32 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 88 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 108 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 167
Query: 178 DAGPS 182
P+
Sbjct: 168 VMSPT 172
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS 160
+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +S
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 161 -HEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|348668207|gb|EGZ08031.1| hypothetical protein PHYSODRAFT_526739 [Phytophthora sojae]
Length = 158
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 68/153 (44%), Gaps = 46/153 (30%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ + RG GF+TFA A +++ ++ +TH L G +V V RA P+E
Sbjct: 49 LMKDKYTGQPRGFGFVTFADATAIDRVLDETHTLDGRSVEVKRAIPRE------------ 96
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+ A G L KKIFVG L T +D R
Sbjct: 97 -------------KTAPGGGSRL------------------KKIFVGGLAPTVTEQDFRH 125
Query: 121 YFSRFGRILD--VYVPKRTGH-RGFGFVTFAEE 150
YF FG+I D V + + T RGFGF+TF EE
Sbjct: 126 YFEEFGKITDAVVMIDRDTQRSRGFGFITFEEE 158
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 86 HPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGF 142
H G+ G S Q K+F+G + E T + LR++F ++G + D + K TG RGF
Sbjct: 4 HSGAIDKTGTSIQP--GKLFIGGVSWETTEDTLRQHFGKYGALTDAALMKDKYTGQPRGF 61
Query: 143 GFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGP 181
GFVTFA+ DRV +H + G+ V + A P + P
Sbjct: 62 GFVTFADATAIDRVLDETHTLDGRSVEVKRAIPREKTAP 100
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 54 RDPLTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 189
Query: 178 DAGPS 182
P+
Sbjct: 190 VMSPT 194
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDKVLAQ 81
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 82 SRHELDSKTIDPKVAFP 98
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 49 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 104
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 105 ----------------------------------------KKIFVGGLSANTVVEDVKQY 124
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 125 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 182
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 112 EATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQ 167
+ + + LR YFS+FG I + V P RGFGFVTFA+ D+V + HE+ +
Sbjct: 26 QTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKT 85
Query: 168 VAIDSATP 175
+ A P
Sbjct: 86 IDPKVAFP 93
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 139 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 189
>gi|449019177|dbj|BAM82579.1| probable heterogeneous nuclear RNP protein A [Cyanidioschyzon
merolae strain 10D]
Length = 273
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRV-S 157
+K+FVG L + L YF RFG+++D V + TG RGFGFVTF EE VA V S
Sbjct: 8 RKVFVGGLSWDTNEASLVAYFERFGKVIDAVVMRNRETGQPRGFGFVTFEEEGVAQAVAS 67
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGS 209
HE+ G+ V A P P N +++ A+ +G G + R+Y S
Sbjct: 68 LERHELDGRLVETKVAVPKSAEDPESNTVVDTAQRYGPSGLGEKPSRRVYVS 119
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 70/154 (45%), Gaps = 39/154 (25%)
Query: 11 RGIGFITFAS---ADSVENLMVDTHELGGSTVVVDRATPK--EDDFRPVGRMSHGGYGAY 65
RG GF+TF A +V +L + HEL G V A PK ED
Sbjct: 49 RGFGFVTFEEEGVAQAVASL--ERHELDGRLVETKVAVPKSAEDP-------------ES 93
Query: 66 NAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRF 125
N + A RY P+ G GE R +++V LPQ T +DLR +FSRF
Sbjct: 94 NTVVDTAQRYG----PS---------GLGEKPSR---RVYVSGLPQACTEDDLRAFFSRF 137
Query: 126 GRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRV 156
G + + V V TG +G+GFV FAE + +V
Sbjct: 138 GSLEAVRVVVDHHTGLSKGYGFVVFAETAASQKV 171
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 57 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 112
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 113 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 132
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 133 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 192
Query: 178 DAGPS 182
P+
Sbjct: 193 VMSPT 197
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 85 SRHELDSKTIDPKVAFP 101
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S RG GF+TF A SV+ D H++ G V RA P+E+
Sbjct: 46 KDPRSNKSRGFGFVTFKEASSVDKAQADRPHKVDGKDVDSKRAMPREE------------ 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
++ +AA+ KKIFVG L ++ T EDL Y
Sbjct: 94 --------TSPEVHAAV-----------------------KKIFVGGLKKDVTNEDLAEY 122
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
F +FG + D + V K T RGF FVTF + D+V R H I G + + A
Sbjct: 123 FGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKA 178
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KK+FVG L + + LR Y+S++G I DV V P+ RGFGFVTF E D+ +
Sbjct: 13 KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKAQA 72
Query: 158 RRSHEICGQQVAIDSATPLDDAGP 181
R H++ G+ V A P ++ P
Sbjct: 73 DRPHKVDGKDVDSKRAMPREETSP 96
>gi|148683901|gb|EDL15848.1| Musashi homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 296
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 22 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 77
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 78 ----------------------------------------KKIFVGGLSANTVVEDVKQY 97
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 98 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 157
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 114 TAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVA 169
+ + LR YFS+FG I + V P RGFGFVTFA+ D+V + HE+ + +
Sbjct: 1 STDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTID 60
Query: 170 IDSATP 175
A P
Sbjct: 61 PKVAFP 66
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 112 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 162
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 48/174 (27%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ + RG GF+TFA +N+++D H + G TV ++ P+E+
Sbjct: 32 IMKDRSTGHPRGFGFVTFADPAVCDNVVLDKHVIDGRTVEAKKSVPREN----------- 80
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
AA P KKIFVG +P T E+ +
Sbjct: 81 --------------MAASKGPKT------------------KKIFVGGIPPSITDEEFKS 108
Query: 121 YFSRFGRILD--VYVPKRTGH-RGFGFVTF-AEEVVADRVSR-RSHEICGQQVA 169
YF FG +++ + TG RGFGFVTF E+VV D ++ + HE+ G+QV+
Sbjct: 109 YFGGFGSVVEHQIMQDHSTGRSRGFGFVTFDNEQVVEDILAHGKMHELGGKQVS 162
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L + + ++L+ +F ++G I+D + K TGH RGFGFVTFA+ V D V
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVLD 61
Query: 160 SHEICGQQVAIDSATPLDDAGPSQ 183
H I G+ V + P ++ S+
Sbjct: 62 KHVIDGRTVEAKKSVPRENMAASK 85
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 32 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 88 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 108 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 167
Query: 178 DAGPS 182
P+
Sbjct: 168 VMSPT 172
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS 160
+F+G L + T E LR YFS+FG + + V P RGFGFVTF ++ D+V +S
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 161 -HEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|426220118|ref|XP_004004264.1| PREDICTED: TAR DNA-binding protein 43-like [Ovis aries]
Length = 283
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 60 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 117
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 118 IIKGISVHISNAEP 131
>gi|426238559|ref|XP_004013218.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Ovis aries]
Length = 343
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 69 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 124
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 125 ----------------------------------------KKIFVGGLSANTVVEDVKQY 144
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 145 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 204
Query: 178 DAGP 181
P
Sbjct: 205 VMFP 208
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 159 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 209
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 119 RRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSAT 174
R YFS+FG I + V P RGFGFVTFA+ D+V + HE+ + + A
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAF 112
Query: 175 P 175
P
Sbjct: 113 P 113
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 99 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 154
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 155 ----------------------------------------KKIFVGGLSANTVVEDVKQY 174
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 175 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 232
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+ LR YFS+FG I + V P RGFGFVTFA+ D+V + H
Sbjct: 80 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPH 128
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 189 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 239
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|38174066|gb|AAH61336.1| TAR DNA-binding protein 43 [Xenopus (Silurana) tropicalis]
Length = 407
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 189 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 246
Query: 162 EICGQQVAIDSATP 175
I G V + +A P
Sbjct: 247 IIKGVSVHVSTAEP 260
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+ V LP + T +DL+ YFS FG ++ V V K +TGH +GFGFV FA+ +V +
Sbjct: 105 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAKTGHSKGFGFVRFADYETQVKVMSQR 164
Query: 161 HEICG 165
H I G
Sbjct: 165 HMIDG 169
>gi|281340836|gb|EFB16420.1| hypothetical protein PANDA_020894 [Ailuropoda melanoleuca]
Length = 329
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 20 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 75
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 76 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 95
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 96 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 155
Query: 178 DAGPS 182
P+
Sbjct: 156 VMSPT 160
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 171
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 172 SATP 175
A P
Sbjct: 61 VAFP 64
>gi|348041333|ref|NP_989054.2| TAR DNA-binding protein 43 isoform 1 [Xenopus (Silurana)
tropicalis]
gi|123915948|sp|Q28F51.1|TADBP_XENTR RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|89269046|emb|CAJ81570.1| TAR DNA binding protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V + +A P
Sbjct: 249 IIKGVSVHVSTAEP 262
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+ V LP + T +DL+ YFS FG ++ V V K +TGH +GFGFV FA+ +V +
Sbjct: 107 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAKTGHSKGFGFVRFADYETQVKVMSQR 166
Query: 161 HEICG 165
H I G
Sbjct: 167 HMIDG 171
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 52/216 (24%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ +D+ S RG GF+TFA + + ++ + H + V V R P+E+
Sbjct: 110 IMRDRHSGRPRGFGFVTFADLAAADRVLEEDHIIDDRAVEVKRTVPREE----------- 158
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+ R +KIFVG +P T ++L
Sbjct: 159 ------MEVKGVVR--------------------------ARKIFVGGIPPTLTEDELGE 186
Query: 121 YFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
YFS +G I++ + + +TG RGFGFVTF E +++ + R+HE+ G++V I A P
Sbjct: 187 YFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGKRVEIKKAVP 246
Query: 176 L---DDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
D G S + + GGYG + G +YG
Sbjct: 247 KRNGGDYGSSGKYHTGFSNGAGGYGAGHNS-GGLYG 281
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E T E YFS+FG I D + + +G RGFGFVTFA+ ADRV
Sbjct: 80 KLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEE 139
Query: 160 SHEICGQQVAIDSATPLDD 178
H I + V + P ++
Sbjct: 140 DHIIDDRAVEVKRTVPREE 158
>gi|351702220|gb|EHB05139.1| RNA-binding protein Musashi-like protein 1, partial [Heterocephalus
glaber]
Length = 329
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 20 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 75
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 76 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 95
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 96 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 155
Query: 178 DAGPS 182
P+
Sbjct: 156 VMSPT 160
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 171
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 172 SATP 175
A P
Sbjct: 61 VAFP 64
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 49/187 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPSQN 184
P+ +
Sbjct: 189 VMSPTSS 195
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF ++G + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ HEL T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Query: 178 DAGP 181
P
Sbjct: 190 VMFP 193
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|426374423|ref|XP_004054073.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Gorilla
gorilla gorilla]
Length = 303
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 5 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 60
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 61 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 80
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 81 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 140
Query: 178 DAGPS 182
P+
Sbjct: 141 VMSPT 145
>gi|24664592|ref|NP_648764.1| CG7804, isoform A [Drosophila melanogaster]
gi|442632483|ref|NP_001261874.1| CG7804, isoform B [Drosophila melanogaster]
gi|21428322|gb|AAM49821.1| AT09813p [Drosophila melanogaster]
gi|23093435|gb|AAF49643.2| CG7804, isoform A [Drosophila melanogaster]
gi|220949576|gb|ACL87331.1| CG7804-PA [synthetic construct]
gi|220958484|gb|ACL91785.1| CG7804-PA [synthetic construct]
gi|440215819|gb|AGB94567.1| CG7804, isoform B [Drosophila melanogaster]
Length = 318
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 62 YGAYNAYISA-ATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+G+Y+ + + R++ G P S RG +Q GK +FVGR ++ A+DLR
Sbjct: 155 FGSYDVQMHVLSKRHSIDGRWCEVKVPAS---RGMGNQEPGK-VFVGRCTEDIEADDLRE 210
Query: 121 YFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG 180
YFS+FG ++DV++PK R F FVTF + V V H I G V + +A +
Sbjct: 211 YFSKFGEVIDVFIPK--PFRAFSFVTFLDPYVPRVVCGEKHIIKGVSVHVSTADKKNVQN 268
Query: 181 PSQNF 185
+Q F
Sbjct: 269 KNQLF 273
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R E+ R I +G L T +DLR YF +G ++ + K R+GH +GFGFV F
Sbjct: 99 RTEAHLRCFDLIVLG-LSYNTTEQDLREYFETYGDVVKAEIKKDTRSGHSKGFGFVRFGS 157
Query: 150 EVVADRVSRRSHEICGQ--QVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMY 207
V V + H I G+ +V + ++ + + P + F+ E +R Y +
Sbjct: 158 YDVQMHVLSKRHSIDGRWCEVKVPASRGMGNQEPGKVFVGRCTEDIE--ADDLREYFSKF 215
Query: 208 GSL 210
G +
Sbjct: 216 GEV 218
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 49/187 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPSQN 184
P+ +
Sbjct: 189 VMSPTSS 195
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF ++G + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|344249205|gb|EGW05309.1| RNA-binding protein Musashi-like 1 [Cricetulus griseus]
Length = 338
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 20 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 75
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 76 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 95
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 96 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 155
Query: 178 DAGPS 182
P+
Sbjct: 156 VMSPT 160
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 171
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 172 SATP 175
A P
Sbjct: 61 VAFP 64
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F RFG++++V Y ++ RGFGF++F +E DR V
Sbjct: 104 KVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGE 163
Query: 159 RSHEICGQQVAIDSATPLDDAG------------PSQNFMMNAAETFGGYGGP 199
+ G+QV I A P D + P Q M A G GGP
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSKVNDTHQGQWGPPQQGPPMGMAGNMGPMGGP 216
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYFSR+G ++D V K + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 160 -SHEICGQQVAIDSATP 175
H++ G+ + P
Sbjct: 74 GPHQLDGRTIDPKPCNP 90
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 71 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 126
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 127 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 146
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 147 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 206
Query: 178 DAGPS 182
P+
Sbjct: 207 VMSPT 211
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 106 VGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-H 161
+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +S H
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH 101
Query: 162 EICGQQVAIDSATP 175
E+ + + A P
Sbjct: 102 ELDSKTIDPKVAFP 115
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ DTH + G V + R P+
Sbjct: 78 KDRKTAQPRGFGFITYADPSVVDKVIEDTHIINGKQVEIKRTIPR--------------- 122
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+G+ KKIFVG +P T ++ R +F
Sbjct: 123 -------------GAVGSKDFKT----------------KKIFVGGIPSNVTEDEFRDFF 153
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEI--CGQQVAIDSATP 175
+R+G + D + + RGFGF+TF E D + ++I G QV I A P
Sbjct: 154 TRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFAGTQVEIKKAEP 211
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T ++F ++G I D + K +T RGFGF+T+A+ V D+V
Sbjct: 46 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGFGFITYADPSVVDKVIED 105
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 106 THIINGKQVEIKRTIP 121
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 3 KDQGSKAHRGIGFITFASADSVENL--MVDTHELGGSTVVVDRATPKE 48
+D + RG GFITF S D+V++L M + + G+ V + +A PK+
Sbjct: 166 RDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFAGTQVEIKKAEPKK 213
>gi|332840634|ref|XP_003314028.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pan
troglodytes]
Length = 324
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 15 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 70
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 71 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 90
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 91 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 150
Query: 178 DAGPS 182
P+
Sbjct: 151 VMSPT 155
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 50/176 (28%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 96 RGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPK---------------------- 133
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
R + + R KKIFVG + Q+ ++++++ YF++FG++
Sbjct: 134 ----------------------NRAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVE 170
Query: 130 DVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 181
+ + + HRGFGFVTF E V DRV H I ++V A P + P
Sbjct: 171 ETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 226
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 19/96 (19%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK----------RTG--------HRGFGF 144
K+FVG L + ++E LR YFS FG + DV + K R G RGFGF
Sbjct: 41 KLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVRLQRSRGFGF 100
Query: 145 VTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDDA 179
+TFAE D+V + H + G+++ ATP + A
Sbjct: 101 ITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRA 136
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 174 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 222
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 86/203 (42%), Gaps = 30/203 (14%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFI FA E ++++ H + G R +DD G
Sbjct: 39 RDRATGRARGFGFIVFADPAVAERVIMEKHMIDG------RMIHDDDD----------GV 82
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ + A L GS +G S+ KKIFVG L T D R+YF
Sbjct: 83 LDPSMVVEAKKAVPRDDQHALSKSGGSAHGSPGPSRT--KKIFVGGLASTVTEADFRKYF 140
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD- 177
+FG I DV V RGFGF+T+ E D+ ++ HE+ G+ V + A P +
Sbjct: 141 EQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKRAVPKEL 200
Query: 178 DAGPSQ-------NFMMNAAETF 193
GPS N+ +N A F
Sbjct: 201 SPGPSMRSPVGGFNYAVNRANNF 223
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + + + LR YF ++G +++ + + TG RGFGF+ FA+ VA+RV
Sbjct: 7 KLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIME 66
Query: 160 SHEICGQQVAIDSATPLD 177
H I G+ + D LD
Sbjct: 67 KHMIDGRMIHDDDDGVLD 84
>gi|301790887|ref|XP_002930448.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Ailuropoda
melanoleuca]
Length = 360
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 51 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 106
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 107 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 126
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 127 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 186
Query: 178 DAGPS 182
P+
Sbjct: 187 VMSPT 191
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 115 AEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAI 170
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 31 CEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDP 90
Query: 171 DSATP 175
A P
Sbjct: 91 KVAFP 95
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 105
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 106 ----------------------------------------KKIFVGGLSANTVVEDVKQY 125
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 185
Query: 178 DAGP 181
P
Sbjct: 186 VMFP 189
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA
Sbjct: 7 GSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 66
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 67 DPASVDKVLGQPHHELDSKTIDPKVAFP 94
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 190
>gi|167516158|ref|XP_001742420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779044|gb|EDQ92658.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 33/179 (18%)
Query: 11 RGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GF+T+ ++++ H + G V RA P+++ +
Sbjct: 41 RGFGFVTYRDGRCCDSVLAHRPHVVDGREVDPKRAVPRQE-------------MESSPRS 87
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
S+ATR R S +K+FVG LP AT E L RYFS FG +
Sbjct: 88 SSATRAKP---------------RSASFTHHVRKVFVGGLPPTATNEMLHRYFSHFGGVE 132
Query: 130 DVYV--PKRT-GHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLDDAGPSQN 184
+ + K+T RGFGFVTF + ++AD+ VS HE G+ V + A P DA S N
Sbjct: 133 EAVIIHDKQTRTPRGFGFVTFEDPIIADKVVSVHYHEFYGKMVEVKRAEPKADASKSPN 191
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L E T + L YF FG ++D V P RGFGFVT+ + D V +
Sbjct: 1 KLFIGGLSPETTHDRLLDYFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAH 60
Query: 159 RSHEICGQQVAIDSATP 175
R H + G++V A P
Sbjct: 61 RPHVVDGREVDPKRAVP 77
>gi|146197870|dbj|BAF57645.1| hnRNP A2/B1 protein [Dugesia japonica]
Length = 386
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 97 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK-RTGH--RGFGFVTFAEEVVA 153
+Q KKIFVG LP + T D+R+YFS++G + DV + +TG+ RGFGFV F E
Sbjct: 13 TQNKFKKIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESV 72
Query: 154 DRV-SRRSHEICGQQVAIDSATPLDDA 179
DR + R H++ G+ V A P +++
Sbjct: 73 DRCQAERPHQLLGKIVDTKRAMPKEES 99
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 64/159 (40%), Gaps = 48/159 (30%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D+ RG GF+ F A+SV+ + H+L G V RA PKE+ P +
Sbjct: 51 RDKTGNKSRGFGFVVFKEAESVDRCQAERPHQLLGKIVDTKRAMPKEESLNPDIHCN--- 107
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
K+IF+G + + T +DL+ Y
Sbjct: 108 ---------------------------------------SKRIFIGGIRRFFTEDDLKDY 128
Query: 122 FSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRV 156
FS FG I+D + KR RGF F+TF + + D+V
Sbjct: 129 FSTFGEIVDCTI-KRDNVSGLSRGFAFITFTDRDIVDKV 166
>gi|20977028|gb|AAM33247.1| mitotic phosphoprotein 39 [Xenopus laevis]
Length = 412
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ +AE+LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 RKVFVGRCTEDMSAEELRQFFSQYGEVVDVFIPK--PFRAFSFVTFADDQVAQSLCGEDL 247
Query: 162 EICGQQVAIDSATP 175
I G V + +A P
Sbjct: 248 IIKGVSVHVSTAEP 261
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSR 158
+ + V LP + T +DL+ YFS FG ++ V V K +TGH +GFGFV F E +V
Sbjct: 104 QDLIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKKDAKTGHSKGFGFVRFTEYETQVKVMS 163
Query: 159 RSHEICG 165
+ H I G
Sbjct: 164 QRHMING 170
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 76/187 (40%), Gaps = 49/187 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPSQN 184
P+ +
Sbjct: 189 VMSPTSS 195
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF ++G + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|326479392|gb|EGE03402.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton equinum
CBS 127.97]
Length = 493
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 54/179 (30%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGS---TVVVDRATPKEDDFRPVGRMSH 59
+D S RG GF+TF +V +MV H L G + RA P+++ R
Sbjct: 32 RDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDGKILYKIDPKRAIPRDEQER------- 84
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLR 119
KIFVG + QEAT ++ +
Sbjct: 85 -----------------------------------------TSKIFVGGVSQEATEQEFK 103
Query: 120 RYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
++F +FGR++D + + K TG RGFGFVTF E + EI G+ + + A P
Sbjct: 104 QFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKKAQP 162
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSRR 159
+F+G L E T + L+ YFS+FG + + V R G RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTV-MRDGASGRSRGFGFLTFTDPKTVNTVMVK 59
Query: 160 SHEICGQ---QVAIDSATPLDD 178
H + G+ ++ A P D+
Sbjct: 60 EHYLDGKILYKIDPKRAIPRDE 81
>gi|426247780|ref|XP_004017654.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Ovis aries]
Length = 325
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 43 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 98
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 99 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 118
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 119 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 178
Query: 178 DAGPS 182
P+
Sbjct: 179 VMSPT 183
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 171
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 24 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 83
Query: 172 SATP 175
A P
Sbjct: 84 VAFP 87
>gi|350592544|ref|XP_003359176.2| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial [Sus
scrofa]
Length = 411
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 102 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 157
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 158 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 177
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 178 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 237
Query: 178 DAGPS 182
P+
Sbjct: 238 VMSPT 242
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F R + LR YF +FG + V P RGFGFVTF ++ D+V +
Sbjct: 70 KLFPVRPSASWGPQGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 129
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 130 SRHELDSKTIDPKVAFP 146
>gi|397525478|ref|XP_003832693.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Pan paniscus]
Length = 424
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 126 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 181
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 182 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 201
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 202 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 261
Query: 178 DAGPS 182
P+
Sbjct: 262 VMSPT 266
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 171
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 107 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 166
Query: 172 SATP 175
A P
Sbjct: 167 VAFP 170
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GF+T+ SV+ + + H L TV A P++ + V R
Sbjct: 58 KDPTTKRSRGFGFVTYKDPASVDTCLENGPHILDNKTVDPKVAFPRKAQPKMVTRT---- 113
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 114 ----------------------------------------KKIFVGGLSAATTVEDVKNY 133
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
FS++G+I D + K T HRGFGFVTF E V D+V HEI + V A P +
Sbjct: 134 FSQYGKIEDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCEIHFHEINKKMVECKKAQPKE 193
Query: 178 DAGPS 182
P+
Sbjct: 194 VMLPT 198
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVAD 154
K+F+G L + T E L+ +F RFG I + V P RGFGFVT+ + D
Sbjct: 26 KMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVD 80
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F RFG++++V Y ++ RGFGF++F +E DR V
Sbjct: 104 KVFLGGLPSNVTETDLRSFFQRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGE 163
Query: 159 RSHEICGQQVAIDSATPLDDAG------------PSQNFMMNAAETFGGYGGP 199
+ G+QV I A P D + P Q M A G GGP
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSKVNDTHQGQWGPPQQGPPMGMAGNMGPMGGP 216
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYFSR+G ++D V K + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVGLVLQN 73
Query: 160 -SHEICGQQVAIDSATP 175
H++ G+ + P
Sbjct: 74 GPHQLDGRTIDPKPCNP 90
>gi|348571397|ref|XP_003471482.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Cavia
porcellus]
Length = 413
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR + TA++LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTDDMTADELRQFFSQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ HEL T+ A P+ + V R
Sbjct: 50 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 105
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 106 ----------------------------------------KKIFVGGLSANTVVEDVKQY 125
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 185
Query: 178 DAGP 181
P
Sbjct: 186 VMFP 189
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + + + LR YFS+FG I + V P RGFGFVTFA+ D+V +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 78 PHHELDSKTIDPKVAFP 94
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 140 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 190
>gi|410899380|ref|XP_003963175.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Takifugu
rubripes]
Length = 383
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+LR+YF ++G + DV++PK R F FVTFA+ VA +
Sbjct: 188 RKVFVGRCTEDMTAEELRQYFMQYGEVTDVFIPKP--FRAFAFVTFADHQVAQALCGEDL 245
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 246 IIKGVSVHISNAEP 259
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQI 160
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
+V + H I G+ D P A P + T +R Y YG +
Sbjct: 161 KVIAQRHLIDGRWC--DCKLPNSKACPDDRKVFVGRCTEDMTAEELRQYFMQYGEV 214
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKHY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|149063557|gb|EDM13880.1| rCG21724, isoform CRA_a [Rattus norvegicus]
Length = 311
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 2 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 57
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 58 ----------------------------------------KKIFVGGLSVNTTVEDVKHY 77
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 78 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 137
Query: 178 DAGPS 182
P+
Sbjct: 138 VMSPT 142
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKHY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 73/182 (40%), Gaps = 57/182 (31%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPK----EDDFRPVGRMS 58
KD+ + RG GFIT+A V+ ++ D H + G V + R P+ DFR
Sbjct: 2009 KDRKTGQPRGFGFITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVGSKDFRT----- 2063
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDL 118
KKIFVG +P T ++
Sbjct: 2064 -------------------------------------------KKIFVGGIPSNVTEDEF 2080
Query: 119 RRYFSRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSA 173
R +F+R+G + D + + RGFGF+TF +EE V D +S + + G QV I A
Sbjct: 2081 RDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKA 2140
Query: 174 TP 175
P
Sbjct: 2141 EP 2142
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 91 YGRGESSQRIG---KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGF 144
Y + E +RI KIF+G L +E T ++F ++G I D + K +TG RGFGF
Sbjct: 1962 YYKREGRRRINPQNTKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGF 2021
Query: 145 VTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNF 185
+T+A+ V D+V H I G+QV I P G S++F
Sbjct: 2022 ITYADPSVVDKVIEDPHIINGKQVEIKRTIPRGAVG-SKDF 2061
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 3 KDQGSKAHRGIGFITFASADSVENL--MVDTHELGGSTVVVDRATPKEDDFRPVGRMSH 59
+D + RG GFITF S ++V++L M + + GS V + +A PK+ P H
Sbjct: 2097 RDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEIKKAEPKKPSSAPPSSKRH 2155
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 58/212 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TF+ +V ++ + H+L G T+ PK + R + + G
Sbjct: 33 KNSESGRSRGFGFVTFSDPANVSLVLQNGPHQLDGRTI-----DPKPCNPRTLQKPKRSG 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P K+F+G LP T DLR Y
Sbjct: 88 -----------------GFP---------------------KVFLGGLPSNVTETDLRSY 109
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAI---DSAT 174
F+RFG++++V Y ++ RGFGF++F +E DR V+ + G+QV I +S++
Sbjct: 110 FTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAESSS 169
Query: 175 PLDDA-----GPSQNF--MMNAAETFGGYGGP 199
++D+ GP Q M A G GGP
Sbjct: 170 KMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGP 201
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYF R+G ++D V K + RGFGFVTF++ V +
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 160 S-HEICGQQVAIDSATP 175
H++ G+ + P
Sbjct: 61 GPHQLDGRTIDPKPCNP 77
>gi|148683902|gb|EDL15849.1| Musashi homolog 2 (Drosophila), isoform CRA_d [Mus musculus]
Length = 250
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 49/184 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 22 RDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 77
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 78 ----------------------------------------KKIFVGGLSANTVVEDVKQY 97
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 98 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 157
Query: 178 DAGP 181
P
Sbjct: 158 VMFP 161
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 112 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 162
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 114 TAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVA 169
+ + LR YFS+FG I + V P RGFGFVTFA+ D+V + HE+ + +
Sbjct: 1 STDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTID 60
Query: 170 IDSATP 175
A P
Sbjct: 61 PKVAFP 66
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 49/180 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
++ +K RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 54 RNPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 189
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + E LR YFS+FG I V P RGFGFVTFA
Sbjct: 11 GSANDSQHDPGKMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFA 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V + HE+ + + A P
Sbjct: 71 DPASVDKVLGQPHHELDSKTIDPKVAFP 98
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|297263669|ref|XP_001087753.2| PREDICTED: hypothetical protein LOC699286 [Macaca mulatta]
Length = 696
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 183 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 238
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 239 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 258
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 259 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 318
Query: 178 DAGPS 182
P+
Sbjct: 319 VMSPT 323
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSA 173
LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + + A
Sbjct: 166 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 225
Query: 174 TP 175
P
Sbjct: 226 FP 227
>gi|291045424|ref|NP_001166975.1| DAZ associated protein 1 [Danio rerio]
Length = 418
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 56 KDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPR--GMQPEKTRTKDG 113
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ + + + KIFVG +P +LR Y
Sbjct: 114 WKGSKSDSNKSK-----------------------------KIFVGGIPHNCGEAELRDY 144
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 145 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 204
Query: 178 DAGPS 182
P+
Sbjct: 205 SKAPA 209
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 83
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 84 KPHNLDGRNIDPKPCTP 100
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITF + SV+ + + H++ G V V +A P++ G++ +G A I
Sbjct: 166 RGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRDSKAPAPGQLGANQWGP-RAII 224
Query: 70 SAATRYAALGAPT 82
SAA +AA APT
Sbjct: 225 SAANGWAAQPAPT 237
>gi|157423039|gb|AAI53535.1| Dazap1 protein [Danio rerio]
Length = 385
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 44 KDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPR--GMQPEKTRTKDG 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ + + + KIFVG +P +LR Y
Sbjct: 102 WKGSKSDSNKSK-----------------------------KIFVGGIPHNCGEAELRDY 132
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 133 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Query: 178 DAGPS 182
P+
Sbjct: 193 SKAPA 197
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITF + SV+ + + H++ G V V +A P++ G++ +G A I
Sbjct: 154 RGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRDSKAPAPGQLGANQWGP-RAII 212
Query: 70 SAATRYAALGAPTL---YDHPGSFYGRGESSQRIGKKIFVGR 108
SAA +AA APT Y G + G+ G + GR
Sbjct: 213 SAANGWAAQPAPTWQQSYGPQGVWVSTGQPLAGYGPPLPAGR 254
>gi|89130657|gb|AAI14332.1| Dazap1 protein [Danio rerio]
Length = 384
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 36/185 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 44 KDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHNLDGRNIDPKPCTPR--GMQPEKTRTKDG 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ + + + KIFVG +P +LR Y
Sbjct: 102 WKGSKSDSNKSK-----------------------------KIFVGGIPHNCGEAELRDY 132
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++V + A P D
Sbjct: 133 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRD 192
Query: 178 DAGPS 182
P+
Sbjct: 193 SKAPA 197
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 72 KPHNLDGRNIDPKPCTP 88
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITF + SV+ + + H++ G V V +A P++ G++ +G A I
Sbjct: 154 RGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRDSKAPAPGQLGANQWGP-RAII 212
Query: 70 SAATRYAALGAPT 82
SAA +AA APT
Sbjct: 213 SAANGWAAQPAPT 225
>gi|354497473|ref|XP_003510844.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cricetulus
griseus]
Length = 510
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 201 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 256
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 257 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 276
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 277 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 336
Query: 178 DAGPS 182
P+
Sbjct: 337 VMSPT 341
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 113 ATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQV 168
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 179 VVTEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTI 238
Query: 169 AIDSATP 175
A P
Sbjct: 239 DPKVAFP 245
>gi|345794484|ref|XP_535409.3| PREDICTED: TAR DNA-binding protein 43 [Canis lupus familiaris]
gi|395521863|ref|XP_003765034.1| PREDICTED: TAR DNA-binding protein 43 [Sarcophilus harrisii]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|432098123|gb|ELK28010.1| TAR DNA-binding protein 43 [Myotis davidii]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F+RFG++++V Y ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 159 RSHEICGQQVAIDSATPLDDA 179
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYF R+G ++D V K + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 160 -SHEICGQQVAIDSATPLDDAGP 181
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|164448723|ref|NP_001039950.2| TAR DNA-binding protein 43 [Bos taurus]
gi|296479176|tpg|DAA21291.1| TPA: TAR DNA binding protein [Bos taurus]
gi|440901447|gb|ELR52388.1| TAR DNA-binding protein 43 [Bos grunniens mutus]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|344283523|ref|XP_003413521.1| PREDICTED: TAR DNA-binding protein 43 [Loxodonta africana]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|338722162|ref|XP_001492915.3| PREDICTED: TAR DNA-binding protein 43 [Equus caballus]
gi|349602995|gb|AEP98963.1| TAR DNA-binding protein 43-like protein [Equus caballus]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|281349254|gb|EFB24838.1| hypothetical protein PANDA_011802 [Ailuropoda melanoleuca]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|345327668|ref|XP_001515396.2| PREDICTED: TAR DNA-binding protein 43 isoform 2 [Ornithorhynchus
anatinus]
Length = 414
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F+RFG++++V Y ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 159 RSHEICGQQVAIDSATPLDDA 179
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYF R+G ++D V K + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 160 -SHEICGQQVAIDSATPLDDAGP 181
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F+RFG++++V Y ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 159 RSHEICGQQVAIDSATPLDDA 179
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYF R+G ++D V K + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 160 -SHEICGQQVAIDSATPLDDAGP 181
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 74/187 (39%), Gaps = 53/187 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+ V+ ++ + H + V + R PK
Sbjct: 48 KDRHTGRPRGFGFITYEDPSVVDTVIAEYHIINDKQVEIKRTIPK--------------- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G ES KKIFVG +P T ++ + +F
Sbjct: 93 -----------------------------GSAESKDFKTKKIFVGGIPTTMTEDEFKNFF 123
Query: 123 SRFGRILDV-----YVPKRTGHRGFGFVTFAEEVVADRVSRRSHEI--CGQQVAIDSATP 175
S+FG++ + +V KR+ RGFGF+ F E V D + + I G QV I A P
Sbjct: 124 SKFGKVTEYEIIRDHVSKRS--RGFGFIVFDNEQVVDNLLAEGNRIDMMGTQVEIKKAEP 181
Query: 176 LDDAGPS 182
+ P+
Sbjct: 182 KKPSNPA 188
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T E +YF ++G I+D + K TG RGFGF+T+ + V D V
Sbjct: 16 KIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAE 75
Query: 160 SHEICGQQVAIDSATP 175
H I +QV I P
Sbjct: 76 YHIINDKQVEIKRTIP 91
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F+RFG++++V Y ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 159 RSHEICGQQVAIDSATPLDDA 179
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYF R+G ++D V K + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 160 -SHEICGQQVAIDSATPLDDAGP 181
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|348514638|ref|XP_003444847.1| PREDICTED: TAR DNA-binding protein 43-like [Oreochromis niloticus]
Length = 396
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+KIFVGR ++ T +DLR+YF ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKIFVGRCTEDMTTDDLRQYFMQYGEVTDVFIPK--PFRAFAFVTFADDQVAQALCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGVSVHISNAEP 263
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFTDYETQT 160
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P A P +
Sbjct: 161 KVIAQRHMIDGRWC--DCKLPNSKACPDE 187
>gi|224079936|ref|XP_002186638.1| PREDICTED: TAR DNA-binding protein 43 [Taeniopygia guttata]
Length = 414
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F+++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFAQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F +
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E T E+++ YF +FG I++V +P +++ +GF F+TF AE+VV D +
Sbjct: 138 KIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDAEQVVTDLLKT 197
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 198 PKQKIAGKEVDVKRATP 214
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F +FG I + V P+ RGF F+ F D+VS
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTTTEAIDKVSA 116
Query: 159 RSHEICG 165
I
Sbjct: 117 AEEHIIN 123
>gi|344243397|gb|EGV99500.1| DAZ-associated protein 1 [Cricetulus griseus]
Length = 365
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 87/220 (39%), Gaps = 45/220 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 2 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 47
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 48 -----------------GMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELRE 90
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 91 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 150
Query: 177 D-------DAGPSQNFMMNAAETFGGYGG-PMRTYGRMYG 208
D AG SQ A G+ G P T+ + YG
Sbjct: 151 DSKNQAPGQAGASQWGSRVAPSAANGWAGQPPPTWQQGYG 190
>gi|327284916|ref|XP_003227181.1| PREDICTED: RNA-binding protein Musashi homolog 2-like, partial
[Anolis carolinensis]
Length = 438
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 68/170 (40%), Gaps = 49/170 (28%)
Query: 11 RGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 95 RGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT------------ 142
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
KKIFVG L ED+++YF +FG++
Sbjct: 143 --------------------------------KKIFVGGLSANTVVEDVKQYFEQFGKVE 170
Query: 130 DVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
D + K T HRGFGFVTF E V ++V HEI + V A P
Sbjct: 171 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQP 220
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 177 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 227
>gi|426327841|ref|XP_004024718.1| PREDICTED: TAR DNA-binding protein 43 [Gorilla gorilla gorilla]
Length = 237
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 14 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 71
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 72 IIKGISVHISNAEP 85
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 73/185 (39%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+ VE ++ HEL T+ A P+ + V R
Sbjct: 55 RDPVTKRSRGFGFVTYTDQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 111 ----------------------------------------KKIFVGGLSVNTTIEDVKHY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 131 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPS 182
P+
Sbjct: 191 VMTPT 195
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVT+ ++ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|402586077|gb|EJW80015.1| hypothetical protein WUBG_09077, partial [Wuchereria bancrofti]
Length = 116
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KK+F+G L +T ED++ YF ++G++ D + K T HRGFGF+TF + V+D+V
Sbjct: 6 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG-GPMRTYGRM 206
HEI G+ V A P + P Q AA YG GP + G +
Sbjct: 66 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARSLYGLGPEQLLGTL 115
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ ++ HRG GFITF + D + + + HE+ G V +A PKE
Sbjct: 40 DKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKE 85
>gi|334322422|ref|XP_001367956.2| PREDICTED: RNA-binding protein Musashi homolog 2-like [Monodelphis
domestica]
Length = 302
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 69/172 (40%), Gaps = 49/172 (28%)
Query: 11 RGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 18 RGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRT------------ 65
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
KKIFVG L ED+++YF +FG++
Sbjct: 66 --------------------------------KKIFVGGLSANTVVEDVKQYFEQFGKVE 93
Query: 130 DVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 94 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 145
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 100 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 150
>gi|224067168|ref|XP_002302389.1| predicted protein [Populus trichocarpa]
gi|222844115|gb|EEE81662.1| predicted protein [Populus trichocarpa]
Length = 172
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 75/180 (41%), Gaps = 48/180 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG-G 61
KD+ +K RG GF+ F+ S + D H + G TV S+G G
Sbjct: 36 KDKITKFPRGFGFVVFSDPSSAARALQDNHVILGRTVT-----------------SNGLG 78
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ N+ + R KKIFVG L T E + Y
Sbjct: 79 MNSDNSTSAKNNRT--------------------------KKIFVGGLASSLTEEQFKNY 112
Query: 122 FSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR-SHEICGQQVAIDSATPLD 177
F +FGR +DV V + + RGFGFVTF E D+V SHE+ G++V + A P D
Sbjct: 113 FEQFGRTVDVVVMQDSLTNRPRGFGFVTFDSEESVDKVLLIGSHELNGKRVEVKKAVPKD 172
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
K+FVG + +E + E LR YFS++G + K RGFGFV F++ A R +
Sbjct: 4 KLFVGGISRETSEETLRNYFSKYGVVSHSLTAKDKITKFPRGFGFVVFSDPSSAARALQD 63
Query: 160 SHEICGQQVA 169
+H I G+ V
Sbjct: 64 NHVILGRTVT 73
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFITFA V+ ++ DTH + G V + R PK
Sbjct: 52 RDRHTGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPK--------------- 96
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA G +S KKIFVG +P T ++L+ +F
Sbjct: 97 ----------------GA-----------GGNQSKDIKTKKIFVGGIPSTVTEDELKDFF 129
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
+++G +++ V + RGFGFV F E V D + + + ++ QV I A P
Sbjct: 130 AKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEP 187
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + + TG RGFGF+TFA+ V D+V
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
+H I G+QV I P AG +Q+ + + F G
Sbjct: 80 THVINGKQVEIKRTIP-KGAGGNQSKDIKTKKIFVG 114
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 73/185 (39%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+ VE ++ HEL T+ A P+ + V R
Sbjct: 55 RDPVTKRSRGFGFVTYTDQAGVEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRT---- 110
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 111 ----------------------------------------KKIFVGGLSVNTTIEDVKHY 130
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 131 FDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 190
Query: 178 DAGPS 182
P+
Sbjct: 191 VMTPT 195
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E L+ YF +FG + + V P RGFGFVT+ ++ ++V ++
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKVLAQ 82
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 83 NRHELDSKTIDPKVAFP 99
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 49/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V+ ++ DTH + G V + R PK
Sbjct: 74 KDRKTGQPRGFGFVTYADLSVVDQVIQDTHVINGKQVEIKRTIPK--------------- 118
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+GA KKIFVG +P T E+ + +F
Sbjct: 119 -------------GAIGAKDFKT----------------KKIFVGGIPATVTEEEFKDFF 149
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSR-RSHEICGQQVAIDSA 173
+++G + D + + + RGFGFVTF E+ V D +S+ E+ G QV I A
Sbjct: 150 TQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKA 205
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T+ ++F ++G I D + K +TG RGFGFVT+A+ V D+V +
Sbjct: 42 KIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQD 101
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 102 THVINGKQVEIKRTIP 117
>gi|74149067|dbj|BAE32189.1| unnamed protein product [Mus musculus]
Length = 414
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|444728185|gb|ELW68649.1| TAR DNA-binding protein 43 [Tupaia chinensis]
Length = 468
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 245 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 302
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 303 IIKGISVHISNAEP 316
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 155 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 213
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 214 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 240
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L E T E +R YF FG I + + PK + RGF F+TF EE ++
Sbjct: 129 KKIFVGGLNPETTEEKIREYFGSFGEIETIELPTDPKTSKRRGFVFITFKEEFAVKKILE 188
Query: 158 RRSHEICGQQVAIDSATP 175
++ H +CG + I A P
Sbjct: 189 KKYHNVCGSKCEIKIAQP 206
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YFS+FG ++D + TG RGFGF+ F E DRV +
Sbjct: 46 KMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVLQQ 105
Query: 159 RSHEICGQQV 168
+ H + G+Q+
Sbjct: 106 KEHRLDGRQI 115
>gi|390178412|ref|XP_003736644.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859438|gb|EIM52717.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 319
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YFS+FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 136 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 195
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 196 PKQKISGKEVDVKRATP 212
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 88 GSFYGRGESSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFG 143
GS + S+QR +K+FVG L E T ++LR +F +FG I + V P+ RGF
Sbjct: 40 GSEHTSAVSNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFA 99
Query: 144 FVTFAEEVVADRVSRRSHEICG 165
F+ F D+VS I
Sbjct: 100 FIVFTNTEAIDKVSSAGEHIIN 121
>gi|380806927|gb|AFE75339.1| RNA-binding protein Musashi homolog 1, partial [Macaca mulatta]
Length = 216
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 9 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTR----- 63
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 64 ---------------------------------------TKKIFVGGLSVNTTVEDVKQY 84
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 85 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 144
Query: 178 DAGPS 182
P+
Sbjct: 145 VMSPT 149
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGHR-GFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YFS+FG I++V +P K+ HR GF F+TF +E+VV D +
Sbjct: 138 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKT 197
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 198 PKQKISGKEVDVKRATP 214
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F +FG I + V P+ RGF F+ F ++VS
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEQVSA 116
Query: 159 RSHEICG 165
I
Sbjct: 117 AEEHIIN 123
>gi|296206694|ref|XP_002750326.1| PREDICTED: TAR DNA-binding protein 43 isoform 2 [Callithrix
jacchus]
gi|403289910|ref|XP_003936082.1| PREDICTED: TAR DNA-binding protein 43 [Saimiri boliviensis
boliviensis]
Length = 414
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR++FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELRQFFSQYGEVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 82/193 (42%), Gaps = 51/193 (26%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GFITFA + ++ + H + G V V + P+E
Sbjct: 92 RGFGFITFADPAVADKVLEEDHVIDGRAVEVKKTVPRE---------------------- 129
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
RG S R KIFVG +P T ++L+ YFS +G I++
Sbjct: 130 ------------------GMEVRGVSKTR---KIFVGGIPSSLTEDELKDYFSSYGAIVE 168
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATPLDDAGPSQNF 185
+ + TG RGFGFVTF E +R+ ++HE+ G+ V I A P AG N
Sbjct: 169 NQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEP-KRAGAEYN- 226
Query: 186 MMNAAETFGGYGG 198
AA+ +GG G
Sbjct: 227 -AGAAKFYGGRNG 238
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + E YFS +G I D + + + TG RGFGF+TFA+ VAD+V
Sbjct: 52 KLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE 111
Query: 160 SHEICGQQVAIDSATP 175
H I G+ V + P
Sbjct: 112 DHVIDGRAVEVKKTVP 127
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 52/173 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF +V +MV H L G + RA P+++
Sbjct: 199 RGFGFLTFKDPKTVNIVMVKEHYLDGKIIDPKRAIPRDE--------------------- 237
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
Q KIFVG + QEA+ E+ + +F +FGR++D
Sbjct: 238 ---------------------------QERTSKIFVGGVSQEASEEEFKNFFMQFGRVID 270
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLDDA 179
+ + K TG RGFGFVTF E D + I + + + A P +A
Sbjct: 271 STLMIDKETGRPRGFGFVTFDNEAAVDLALQHPDLRIRDKPIEVKKAQPRGNA 323
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSR 158
K+F+G L E T E LR YFS+FG + + V R G RGFGF+TF + + V
Sbjct: 159 KMFIGGLNWETTDESLRDYFSQFGEVSECTV-MRDGPSGRSRGFGFLTFKDPKTVNIVMV 217
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H + G+ + A P D+
Sbjct: 218 KEHYLDGKIIDPKRAIPRDE 237
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 68/176 (38%), Gaps = 51/176 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF V +MV H L G + RA P+++
Sbjct: 258 RDSATGRSRGFGFLTFKDPKVVNIVMVKEHYLDGKIIDPKRAIPRDE------------- 304
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + E T + R YF
Sbjct: 305 -----------------------------------QEKTSKIFVGGVSPETTDHEFREYF 329
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATP 175
S+FGR++D + + K TG RGFGFVTF E + E+ G+ + + A P
Sbjct: 330 SQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLNAKLELHGKPIEVKKAQP 385
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRV 156
I KK+F+G L E T E LR YFS+FG +++ V + + RGFGF+TF + V + V
Sbjct: 223 IAKKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIV 282
Query: 157 SRRSHEICGQQVAIDSATPLDD 178
+ H + G+ + A P D+
Sbjct: 283 MVKEHYLDGKIIDPKRAIPRDE 304
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGHR-GFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YFS+FG I++V +P K+ HR GF F+TF +E+VV D +
Sbjct: 138 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKT 197
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 198 PKQKISGKEVDVKRATP 214
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F +FG I + V P+ RGF F+ F D+VS
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 116
Query: 159 RSHEICG 165
I
Sbjct: 117 AEEHIIN 123
>gi|148682887|gb|EDL14834.1| mCG16669, isoform CRA_e [Mus musculus]
Length = 416
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 193 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGEDL 250
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 251 IIKGISVHISNAEP 264
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 103 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 161
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 162 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 188
>gi|74223342|dbj|BAE21557.1| unnamed protein product [Mus musculus]
Length = 414
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|195036936|ref|XP_001989924.1| GH19060 [Drosophila grimshawi]
gi|193894120|gb|EDV92986.1| GH19060 [Drosophila grimshawi]
Length = 349
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGHR-GFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YFS+FG I++V +P K+ HR GF F+TF +E+VV D +
Sbjct: 140 KIFVGGLTTEISDEEIKTYFSQFGTIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKT 199
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 200 PKQKIAGKEVDVKRATP 216
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 59 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSA 118
Query: 159 RSHEICGQQ 167
I +
Sbjct: 119 AEEHIINSK 127
>gi|395744950|ref|XP_002823898.2| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pongo
abelii]
Length = 302
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 49/181 (27%)
Query: 7 SKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAY 65
+ A RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 8 TTARRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT-------- 59
Query: 66 NAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRF 125
KKIFVG L T ED+++YF +F
Sbjct: 60 ------------------------------------KKIFVGGLSVNTTVEDVKQYFEQF 83
Query: 126 GRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 181
G++ D + K T HRGFGFVTF E + ++V HEI + V A P + P
Sbjct: 84 GKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSP 143
Query: 182 S 182
+
Sbjct: 144 T 144
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D VE + + HE+ V +A PKE
Sbjct: 94 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 139
>gi|21704096|ref|NP_663531.1| TAR DNA-binding protein 43 isoform 1 [Mus musculus]
gi|20140642|sp|Q921F2.1|TADBP_MOUSE RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|15277550|gb|AAH12873.1| TAR DNA binding protein [Mus musculus]
gi|19343817|gb|AAH25544.1| TAR DNA binding protein [Mus musculus]
gi|20379859|gb|AAH27772.1| TAR DNA binding protein [Mus musculus]
gi|21410360|gb|AAH31126.1| TAR DNA binding protein [Mus musculus]
gi|23271460|gb|AAH33475.1| TAR DNA binding protein [Mus musculus]
gi|26328025|dbj|BAC27753.1| unnamed protein product [Mus musculus]
gi|74222000|dbj|BAE26823.1| unnamed protein product [Mus musculus]
gi|148682884|gb|EDL14831.1| mCG16669, isoform CRA_b [Mus musculus]
gi|257222464|gb|ACV52542.1| TDP-43 variant 1 [Mus musculus]
Length = 414
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|149024635|gb|EDL81132.1| rCG31562, isoform CRA_b [Rattus norvegicus]
Length = 414
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ DTH + G V + R P+
Sbjct: 75 KDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKRTIPR--------------- 119
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+G+ S KKIFVG +P T ++ R +F
Sbjct: 120 -------------GAVGS--------------NSKDFRTKKIFVGGIPSTVTEDEFRDFF 152
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATP 175
+R+G + D + + RGFGF+T+ +EE V D +S + E G QV I A P
Sbjct: 153 TRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEP 210
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T ++F ++G I D + K +TG RGFGF+T+A+ V D V
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 102
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 103 THIINGKQVEIKRTIP 118
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 48/180 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA ++V ++ + H L G T+ P+
Sbjct: 46 KNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCNPRT------------- 92
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ R ++ K+F+G LP T DLR +
Sbjct: 93 -------LQKPKRSSSY-----------------------PKVFLGGLPSNVTETDLRTF 122
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
FSR+G++++V Y ++ RGFGF++F ++ DR V+ + G+QV I A P D
Sbjct: 123 FSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPRD 182
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E E L+RYF+R+G ++D V K + RGFGFVTFA+ + V +
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 74 GPHVLDGRTIDPKPCNP 90
>gi|149063558|gb|EDM13881.1| rCG21724, isoform CRA_b [Rattus norvegicus]
Length = 262
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 2 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 57
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 58 ----------------------------------------KKIFVGGLSVNTTVEDVKHY 77
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 78 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 137
Query: 178 DAGPS 182
P+
Sbjct: 138 VMSPT 142
>gi|148687912|gb|EDL19859.1| Musashi homolog 1(Drosophila) [Mus musculus]
Length = 280
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 20 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 75
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 76 ----------------------------------------KKIFVGGLSVNTTVEDVKHY 95
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 96 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 155
Query: 178 DAGPS 182
P+
Sbjct: 156 VMSPT 160
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 116 EDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAID 171
E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 172 SATP 175
A P
Sbjct: 61 VAFP 64
>gi|380030870|ref|XP_003699062.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis florea]
Length = 185
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 50/176 (28%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 16 RGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPK---------------------- 53
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
R + + R KKIFVG + Q+ ++++++ YF++FG++
Sbjct: 54 ----------------------NRAKQANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVE 90
Query: 130 DVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDDAGP 181
+ + + HRGFGFVTF E V DRV H I ++V A P + P
Sbjct: 91 ETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVQP 146
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF + D V+ + + H + V +A PKE
Sbjct: 94 MLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 142
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 32 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 87
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED++ Y
Sbjct: 88 ----------------------------------------KKIFVGGLSVNTTVEDVKHY 107
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 108 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 167
Query: 178 DAGPS 182
P+
Sbjct: 168 VMSPT 172
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS 160
+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +S
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 161 -HEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 61 RHELDSKTIDPKVAFP 76
>gi|313240342|emb|CBY32684.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A V++ M + H+L G V RA +E+ RP
Sbjct: 45 QDPATKRSRGFGFVTFEKAQMVDDCMSNRPHKLDGREVEAKRAVSREESHRP-------- 96
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G + + K++F+G + + T+ED+ Y
Sbjct: 97 -GIHKSV---------------------------------KRMFMGGIKENVTSEDVTEY 122
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F ++G++ +++ K +G RGFGFV F + V D+ V R H I G + + A +
Sbjct: 123 FEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKAFSKE 182
Query: 178 DAGPSQNFMMN 188
D F+ N
Sbjct: 183 DQTRKAGFVNN 193
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-E 150
E ++I +K+F+G L T + L +FS++G++ D V P RGFGFVTF + +
Sbjct: 6 EEPEQI-RKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQ 64
Query: 151 VVADRVSRRSHEICGQQVAIDSATPLDDA 179
+V D +S R H++ G++V A +++
Sbjct: 65 MVDDCMSNRPHKLDGREVEAKRAVSREES 93
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSH 59
+ +D+ S RG GF+ F D V+ ++ H + G ++ V +A KED R G +++
Sbjct: 134 LLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKAFSKEDQTRKAGFVNN 193
Query: 60 GGYGAYNAYISA 71
GY Y+A+ A
Sbjct: 194 NGYYGYDAFAWA 205
>gi|313226215|emb|CBY21358.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 82/191 (42%), Gaps = 47/191 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A V++ M + H+L G V RA +E+ RP
Sbjct: 45 QDPATKRSRGFGFVTFEKAQMVDDCMSNRPHKLDGREVEAKRAVSREESHRP-------- 96
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G + + K++F+G + + T+ED+ Y
Sbjct: 97 -GIHKSV---------------------------------KRMFMGGIKENVTSEDVTEY 122
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F ++G++ +++ K +G RGFGFV F + V D+ V R H I G + + A +
Sbjct: 123 FEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKAFSKE 182
Query: 178 DAGPSQNFMMN 188
D F+ N
Sbjct: 183 DQTRKAGFVNN 193
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-E 150
E ++I +K+F+G L T + L +FS++G++ D V P RGFGFVTF + +
Sbjct: 6 EEPEQI-RKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQ 64
Query: 151 VVADRVSRRSHEICGQQVAIDSATPLDDA 179
+V D +S R H++ G++V A +++
Sbjct: 65 MVDDCMSNRPHKLDGREVEAKRAVSREES 93
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSH 59
+ +D+ S RG GF+ F D V+ ++ H + G ++ V +A KED R G +++
Sbjct: 134 LLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKAFSKEDQTRKAGFVNN 193
Query: 60 GGYGAYNAYISA 71
GY Y+A+ A
Sbjct: 194 NGYYGYDAFAWA 205
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 48/180 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
K+ S RG GF+TFA ++V ++ + H L G T+ P+
Sbjct: 46 KNSESGRSRGFGFVTFADPNNVNVVLQNGPHVLDGRTIDPKPCNPRT------------- 92
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ R ++ K+F+G LP T DLR +
Sbjct: 93 -------LQKPKRSSSY-----------------------PKVFLGGLPSNVTETDLRTF 122
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
FSR+G++++V Y ++ RGFGF++F ++ DR V+ + G+QV I A P D
Sbjct: 123 FSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAEPRD 182
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E E L+RYF+R+G ++D V K + RGFGFVTFA+ + V +
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 160 -SHEICGQQVAIDSATP 175
H + G+ + P
Sbjct: 74 GPHVLDGRTIDPKPCNP 90
>gi|312373745|gb|EFR21436.1| hypothetical protein AND_17061 [Anopheles darlingi]
Length = 609
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEV 151
+ + ++ KIF+GRL ++ A+D+R YFS++G + DV++PK R F FVTF +
Sbjct: 191 SKDQMQHQMPSKIFLGRLTEDINADDIRGYFSKYGEVADVFIPK--PFRAFAFVTFMDPH 248
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDDAG 180
VA + H I V + +A+P + G
Sbjct: 249 VAQSLCGEDHLIKSTSVYVSTASPRPEHG 277
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
R ES R + V LP + T E LR YF FG +L V + K TG +G+GF+ FA
Sbjct: 106 RIESRNRTTTDLIVLGLPWKTTEERLREYFESFGELLVVQLKKDANTGQSKGYGFIRFAR 165
Query: 150 EVVADRVSRRSHEI----CGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGR 205
+V + H I C +V S + PS+ F+ E +R Y
Sbjct: 166 FECQMKVLSKRHLIDSRWCDVKVP-SSKDQMQHQMPSKIFLGRLTEDIN--ADDIRGYFS 222
Query: 206 MYGSL 210
YG +
Sbjct: 223 KYGEV 227
>gi|119592079|gb|EAW71673.1| TAR DNA binding protein, isoform CRA_d [Homo sapiens]
Length = 298
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPK--PFRAFAFVTFADDQIAQSLCGED 247
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYG 208
I G V I +A P ++ N + + FG G P+ +YG
Sbjct: 248 LIIKGISVHISNAEPKHNS----NRQLERSGRFG--GNPVHLISNVYG 289
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
+V + H I G+ D P ++ SQ+ + + + F G
Sbjct: 160 KVMSQRHMIDGRWC--DCKLP--NSKQSQDEPLRSRKVFVG 196
>gi|226438196|pdb|3D2W|A Chain A, Crystal Structure Of Mouse Tdp-43 Rrm2 Domain In Complex
Wit
Length = 89
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
G K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 11 GSKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 68
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 69 LIIKGISVHISNAEP 83
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 82/193 (42%), Gaps = 51/193 (26%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GFITFA + ++ + H + G V V + P+E
Sbjct: 240 RGFGFITFADPAVADKVLEEDHVIDGRAVEVKKTVPRE---------------------- 277
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
RG S R KIFVG +P T ++L+ YFS +G I++
Sbjct: 278 ------------------GMEVRGVSKTR---KIFVGGIPSSLTEDELKDYFSSYGAIVE 316
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATPLDDAGPSQNF 185
+ + TG RGFGFVTF E +R+ ++HE+ G+ V I A P AG N
Sbjct: 317 NQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEP-KRAGAEYN- 374
Query: 186 MMNAAETFGGYGG 198
AA+ +GG G
Sbjct: 375 -AGAAKFYGGRNG 386
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR 158
+K+FVG + E + E YFS +G I D + + + TG RGFGF+TFA+ VAD+V
Sbjct: 199 EKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLE 258
Query: 159 RSHEICGQQVAIDSATP 175
H I G+ V + P
Sbjct: 259 EDHVIDGRAVEVKKTVP 275
>gi|161084522|ref|NP_001097632.1| RNA-binding protein 6, isoform C [Drosophila melanogaster]
gi|158028570|gb|ABW08560.1| RNA-binding protein 6, isoform C [Drosophila melanogaster]
Length = 257
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 21/124 (16%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED++ YF +FG I D + K+T HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 217
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 108
Query: 218 GMGS 221
G+G+
Sbjct: 109 GLGT 112
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D V+ + + HE+ V +A PKE
Sbjct: 40 DKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 85
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 51/183 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ +K RG GF+TF+ ++ ++ D H + G T+
Sbjct: 208 KDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVIDGRTL----------------------- 244
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ + G+ + D P +KIFVG LP T ++LR +F
Sbjct: 245 -----------KGQSQGSNVIKDGPRP------------RKIFVGGLPSSLTEDELREHF 281
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATPLD 177
S +G+I++ + + TG RGFGFVTF E +RV R ++ G+QV I A P
Sbjct: 282 SPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKK 341
Query: 178 DAG 180
G
Sbjct: 342 HGG 344
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E ++F ++G I D + K RGFGFVTF++ V D+V
Sbjct: 176 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLED 235
Query: 160 SHEICGQQV 168
H I G+ +
Sbjct: 236 EHVIDGRTL 244
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 85/213 (39%), Gaps = 57/213 (26%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF + ++ H + G V V R P+ D N +
Sbjct: 462 RGFGFVTFCDPAIADMVLKIDHIIDGRAVEVKRTVPRAD---------------MNDKMV 506
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
+ T KKIFVG +P T + + YFS FGRI++
Sbjct: 507 SRT----------------------------KKIFVGGIPPGLTEVEFKDYFSSFGRIIE 538
Query: 131 V-----YVPKRTGHRGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATPLDDAGPSQ 183
Y KR+ RGFGF+TF E D + R HE+ G+QV I A P A
Sbjct: 539 HQIMIDYKTKRS--RGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVA---Y 593
Query: 184 NFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWG 216
+F N+ T GY M G +Y + D+G
Sbjct: 594 DFNSNSGHTSSGY--DMYRCGGLYDDIIGTDFG 624
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E T + YFS++G I D + + K TG RGFGFVTF + +AD V +
Sbjct: 422 KLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 481
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P D
Sbjct: 482 DHIIDGRAVEVKRTVPRAD 500
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMV--DTHELGGSTVVVDRATPKED--DFRPVGRMSH 59
D +K RG GFITF + DSV+N+ HELGG V + +A PK+ DF +
Sbjct: 544 DYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSNSGHTS 603
Query: 60 GGYGAYNA 67
GY Y
Sbjct: 604 SGYDMYRC 611
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 90 FYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVT 146
FY R E+ +R KIF+G L +E T ++F ++G I D + K +TG RGFGFVT
Sbjct: 1919 FYKR-EARRR---KIFIGGLARETTTAQFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVT 1974
Query: 147 FAEEVVADRVSRRSHEICGQQVAIDSATP 175
+A+ V D+V + SH I G+QV I P
Sbjct: 1975 YADPSVVDQVIQDSHVINGKQVEIKRTIP 2003
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 84/229 (36%), Gaps = 76/229 (33%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V+ ++ D+H + G V + R PK
Sbjct: 1960 KDRKTGQPRGFGFVTYADPSVVDQVIQDSHVINGKQVEIKRTIPK--------------- 2004
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+GA KKIFVG +P T + + +F
Sbjct: 2005 -------------GAIGARDFKT----------------KKIFVGGIPTTVTEVEFKEFF 2035
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATPL- 176
++G +++ + + RGFGF+TF E+ V D +++ + E+ G QV I A P
Sbjct: 2036 MQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLELAGGQVEIKKAEPKK 2095
Query: 177 -DDAGPSQNFMMNAAETFGG-------------------------YGGP 199
+ PS ++ FG YG
Sbjct: 2096 PNPPLPSSKRYNDSRPGFGDAYDGFGGSGFGGGGGGGGAYRSGGPYGSR 2144
>gi|195451832|ref|XP_002073095.1| GK13337 [Drosophila willistoni]
gi|194169180|gb|EDW84081.1| GK13337 [Drosophila willistoni]
Length = 353
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E++R YFS+FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 147 KIFVGGLTTEISDEEIRTYFSQFGTIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 206
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 207 PKQKISGKEVDVKRATP 223
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRI--LDVYVPKRTGH-RGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F +FG I ++V +TG RGF F+ F D+VS
Sbjct: 66 RKLFVGGLSWETTEKELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVSS 125
Query: 159 -RSHEICGQQV 168
H I G++V
Sbjct: 126 AEEHVINGKKV 136
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 79/199 (39%), Gaps = 45/199 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF+ SV+ ++ + HEL + A P+
Sbjct: 57 RDPITKRSRGFGFVTFSDPASVDKVLANGPHELDSKVIDPKVAFPR-------------- 102
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R P L KKIFVG L T +D+++Y
Sbjct: 103 ------------RPNTANQPKLVTK--------------TKKIFVGGLSASTTVDDVKQY 136
Query: 122 FSRFGRILD---VYVPKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG+I D ++ HRGF FVTF E V D+V HEI + V A P +
Sbjct: 137 FEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCEIHFHEINNKMVECKKAQPKE 196
Query: 178 DAGPSQNFMMNAAETFGGY 196
P + + + T G+
Sbjct: 197 VMMPQGSVDDDLSFTLPGF 215
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+F+G L + T E LR YF+++G I + V P RGFGFVTF++ D+V +
Sbjct: 25 KMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDKVLAN 84
Query: 159 RSHEICGQQVAIDSATP 175
HE+ + + A P
Sbjct: 85 GPHELDSKVIDPKVAFP 101
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ DTH + G V + R P+
Sbjct: 77 KDRKTGQPRGFGFITYADPSVVDTVIEDTHIINGKQVEIKRTIPR--------------- 121
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A G+ S KKIFVG +P T ++ R +F
Sbjct: 122 -------------GAAGS--------------NSKDFRTKKIFVGGIPSTVTEDEFRDFF 154
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATP 175
+R+G + D + + RGFGF+T+ +EE V D +S + E G QV I A P
Sbjct: 155 TRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFAGAQVEIKKAEP 212
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T ++F ++G I D + K +TG RGFGF+T+A+ V D V
Sbjct: 45 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIED 104
Query: 160 SHEICGQQVAIDSATPLDDAG 180
+H I G+QV I P AG
Sbjct: 105 THIINGKQVEIKRTIPRGAAG 125
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 90/222 (40%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPK---EDDFRPVGRMS 58
KD+ + RG GF+ F + V ++ H L G + TP+ + RP
Sbjct: 132 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQ 191
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDL 118
G R +SS+ KIFVG +P +L
Sbjct: 192 KGP-------------------------------RSDSSK--SNKIFVGGIPHNCGETEL 218
Query: 119 RRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSAT 174
R YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A
Sbjct: 219 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 278
Query: 175 PLD-------DAGPSQNFMMNAAETFGGYGG-PMRTYGRMYG 208
P D AG SQ A G+ G P T+ + YG
Sbjct: 279 PRDSKNQAPGQAGASQWGSRVAPSAANGWAGQPPPTWQQGYG 320
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVS 157
+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 99 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 158
Query: 158 RRSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 159 SRPHTLDGRNIDPKPCTP 176
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 55/182 (30%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT++ V+ ++ D H + G V + R PK
Sbjct: 58 KDRHTSQPRGFGFITYSDPAVVDKVIEDNHVINGKQVEIKRTIPK--------------- 102
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQR--IGKKIFVGRLPQEATAEDLRR 120
G +SS + KKIFVG LP T ++ +
Sbjct: 103 -----------------------------GSVQSSSKDFKTKKIFVGGLPSTLTEDEFKS 133
Query: 121 YFSRFGRILDVYV-----PKRTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSA 173
+F+R+G ++D + KR+ RGFGF+ FA E V D + + ++ G +V I A
Sbjct: 134 FFARYGTVVDHQIMFDHETKRS--RGFGFIVFASEQVVDDLLANGNMVDLAGSKVEIKKA 191
Query: 174 TP 175
P
Sbjct: 192 EP 193
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIFVG LP++ T R+F ++G I+D + K + RGFGF+T+++ V D+V
Sbjct: 26 KIFVGGLPRDTTDATFVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIED 85
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 86 NHVINGKQVEIKRTIP 101
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTH--ELGGSTVVVDRATPKEDDFRP 53
D +K RG GFI FAS V++L+ + + +L GS V + +A PK+ P
Sbjct: 149 DHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAGSKVEIKKAEPKKSSNAP 200
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 53/187 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ + H + G V + R PK
Sbjct: 51 KDRHTGRPRGFGFITYADPSVVDQVIQENHVVNGKQVEIKRTIPK--------------- 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G +++ KKIFVG +P + ++L+ +F
Sbjct: 96 -----------------------------GSSQANDFKTKKIFVGGIPTSVSEDELKNFF 126
Query: 123 SRFGRILDV-----YVPKRTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
S++G++++ + KR+ RGFGF+ F E V D + + ++ G QV I A P
Sbjct: 127 SKYGKVVEHEIIRDHTTKRS--RGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIKKAEP 184
Query: 176 LDDAGPS 182
+ P+
Sbjct: 185 KKSSNPA 191
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T E +YF ++G I D + K TG RGFGF+T+A+ V D+V +
Sbjct: 19 KIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQE 78
Query: 160 SHEICGQQVAIDSATP 175
+H + G+QV I P
Sbjct: 79 NHVVNGKQVEIKRTIP 94
>gi|386771322|ref|NP_001246812.1| RNA-binding protein 6, isoform E [Drosophila melanogaster]
gi|383291983|gb|AFH04483.1| RNA-binding protein 6, isoform E [Drosophila melanogaster]
Length = 259
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 21/124 (16%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED++ YF +FG I D + K+T HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 217
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 108
Query: 218 GMGS 221
G+G+
Sbjct: 109 GLGT 112
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D V+ + + HE+ V +A PKE
Sbjct: 40 DKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 85
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G + G R E+S+ KIFVG +P +LR Y
Sbjct: 89 -GMQPERTRPREGWQQKGP------------RTENSR--SNKIFVGGIPHNCGETELREY 133
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F RFG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 134 FKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 193
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|444723183|gb|ELW63844.1| RNA-binding protein Musashi like protein 1 [Tupaia chinensis]
Length = 324
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 47 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 102
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T +D+++Y
Sbjct: 103 ----------------------------------------KKIFVGGLSVNTTVDDVKQY 122
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 123 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 182
Query: 178 DAGPS 182
P+
Sbjct: 183 VMSPT 187
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 118 LRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSA 173
LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + + A
Sbjct: 30 LREYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 89
Query: 174 TP 175
P
Sbjct: 90 FP 91
>gi|224135041|ref|XP_002327552.1| predicted protein [Populus trichocarpa]
gi|222836106|gb|EEE74527.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 50/171 (29%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKED-DFRPVGRMSHGGY 62
D+ S RG GF+TFA + ++ + H + G V V R P+ED D + V R
Sbjct: 34 DRHSGRPRGFGFVTFADPAVADRVLEEDHVIDGRAVEVKRTVPREDMDVKGVTRT----- 88
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KKIFVG +P T ++L+ YF
Sbjct: 89 ---------------------------------------KKIFVGGIPPSLTEDELKEYF 109
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQV 168
S +G I+D + + +TG RGFGFVTF E +++ R+HE+ G+QV
Sbjct: 110 SVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFSEGRTHELGGKQV 160
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E T E YFS++G ++D + + +G RGFGFVTFA+ VADRV
Sbjct: 1 KLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGFGFVTFADPAVADRVLEE 60
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P +D
Sbjct: 61 DHVIDGRAVEVKRTVPRED 79
>gi|326506828|dbj|BAJ91455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
KKIFVG LP T E+ R+YF FG + DV V RGFGF+TF E DRV
Sbjct: 16 KKIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLH 75
Query: 159 RS-HEICGQQVAIDSATPLD 177
++ H++ G+ V + A P +
Sbjct: 76 KTFHDLGGKMVEVKRALPRE 95
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDD 50
DQ ++ RG GFITF S D+V+ ++ T H+LGG V V RA P+E +
Sbjct: 50 DQTTQRPRGFGFITFDSEDAVDRVLHKTFHDLGGKMVEVKRALPREAN 97
>gi|194381506|dbj|BAG58707.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 75 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 132
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 133 IIKGISVHISNAEP 146
>gi|145362676|ref|NP_974899.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332008157|gb|AED95540.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 371
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSR 158
KKIFVG L T + ++YF++FG I DV V RT RGFGF+++ E D+V +
Sbjct: 46 KKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQ 105
Query: 159 RS-HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 194
++ HE+ G+ V + A P D A + MN +FG
Sbjct: 106 KTFHELNGKMVEVKLAVPKDMALNTMRNQMN-VNSFG 141
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YFS+FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 136 KIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 195
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 196 PKQKISGKEVDVKRATP 212
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 88 GSFYGRGESSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFG 143
GS + S+QR +K+FVG L E T ++LR +F +FG I + V P+ RGF
Sbjct: 40 GSEHTSAVSNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFA 99
Query: 144 FVTFAEEVVADRVSRRSHEICGQQ 167
F+ F D+VS I +
Sbjct: 100 FIVFTNTEAIDKVSSAGEHIINSK 123
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 70/174 (40%), Gaps = 47/174 (27%)
Query: 11 RGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG F+TFA+ V+ ++ H+L TV RA P + G
Sbjct: 114 RGFAFVTFANPADVDKVLESGPHQLDNRTVDPKRALPLHKQIQLKG-------------- 159
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
Q KKIF+G L E T L+ +FS FG IL
Sbjct: 160 ----------------------------QHRTKKIFIGGLGAEHTESSLKEFFSEFGNIL 191
Query: 130 DV-YVPKRT--GHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
DV +V + RGF F++F EE V ++ H + G+QV I ATP D A
Sbjct: 192 DVEFVTDKLTRKRRGFCFLSFDTEEAVDKACEKQFHVVSGRQVEIKRATPKDQA 245
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV 156
K+F+G L E T E L++YFS+FG I+ + P RGF FVTFA D+V
Sbjct: 71 CNNKMFIGGLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKV 130
Query: 157 SRR-SHEICGQQVAIDSATPL 176
H++ + V A PL
Sbjct: 131 LESGPHQLDNRTVDPKRALPL 151
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 192 DSKSQAPGQPGASQWGSRIVPNAAN--GWAGQPPPTWQQGYG 231
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|354496958|ref|XP_003510590.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Cricetulus
griseus]
Length = 302
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
I G V I +A P ++ N + + FGG G + + + L
Sbjct: 248 LIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPGILLSTCFLIQEL 293
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|291237256|ref|XP_002738551.1| PREDICTED: TAR DNA binding protein-like [Saccoglossus kowalevskii]
Length = 311
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
G+K+FVGR+ ++ T EDL YF++FG ++DV++PK R F FVTFA+ VA +
Sbjct: 194 GRKVFVGRVTEDITKEDLYSYFTQFGEVVDVFIPK--PFRFFAFVTFADAEVAQSLCGED 251
Query: 161 HEICGQQVAIDSATP 175
+ G V + +A P
Sbjct: 252 LIVKGNSVHVSNAEP 266
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
R Q+ I +G LP + T E+L+ YFS FG +L V PK +GFGFV F +
Sbjct: 100 RRVEKQKCTDLIVLG-LPWKTTEEELKEYFSDFGELLMSQVKKDPKTGNSKGFGFVRFKD 158
Query: 150 EVVADRVSRRSHEICGQ 166
+V + H I G+
Sbjct: 159 YETQLKVMSQRHNIDGR 175
>gi|66801345|ref|XP_629598.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60462994|gb|EAL61190.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 687
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 49/170 (28%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYG 63
++ SK+ RG GF+TF ++ +++ H + G V + RA PKE+
Sbjct: 142 EKASKS-RGFGFVTFVDPSVIDEVILINHSIEGKNVEIRRAIPKEE-------------- 186
Query: 64 AYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFS 123
+ + P +K+FVG LP+ T++D YFS
Sbjct: 187 -------------------MTEEPKK------------QKLFVGGLPKHITSDDFNNYFS 215
Query: 124 RFGRI--LDVYVPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAI 170
FG I ++ K +GFGF+ F +E V + + + + H I G++V I
Sbjct: 216 EFGEISEYNLLTEKNGTIKGFGFICFKDESVNEIILNEQQHIILGKRVDI 265
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRT----GHRGFGFVTFAEEVVADR 155
I KIFVG L + ++ E L+ YFS FG + + V K T RGFGFVTF + V D
Sbjct: 104 ISGKIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFVTFVDPSVIDE 163
Query: 156 VSRRSHEICGQQVAIDSATPLDD 178
V +H I G+ V I A P ++
Sbjct: 164 VILINHSIEGKNVEIRRAIPKEE 186
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 63 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 109 -----------------GMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELRE 151
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 152 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 211
Query: 177 D 177
D
Sbjct: 212 D 212
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 31 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 90
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 91 RPHTLDGRNIDPKPCTP 107
>gi|148682889|gb|EDL14836.1| mCG16669, isoform CRA_g [Mus musculus]
Length = 288
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG 198
I G V I +A P ++ N + + FGG G
Sbjct: 248 LIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPG 281
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|428175617|gb|EKX44506.1| hypothetical protein GUITHDRAFT_72201, partial [Guillardia theta
CCMP2712]
Length = 164
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G LP E T DL+ YF RFG + DV V K TG+ RGFGFVTF + VA++V
Sbjct: 1 KIFIGGLPTETTDFDLKNYFVRFGVLADVVVMKDKLTGNGRGFGFVTFEDPEVAEKVVAA 60
Query: 160 SHEICGQQVAIDSATPLDDA-GPSQN 184
H I G+ V A P +A GP +
Sbjct: 61 RHTIRGRSVEAKLAIPRGEAPGPRSD 86
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 71/167 (42%), Gaps = 48/167 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+TF + E ++ H + G +V A P+ +
Sbjct: 33 KDKLTGNGRGFGFVTFEDPEVAEKVVAARHTIRGRSVEAKLAIPRGE------------- 79
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
PG R + S R+ KIFVG L + D + YF
Sbjct: 80 -----------------------APGP---RSDPSDRV-TKIFVGGLASTVSEADFKNYF 112
Query: 123 SRFGRILDVYV-----PKRTGHRGFGFVTFAE-EVVADRVSRRSHEI 163
SR+G+I+D + KR+ RGFGF+TF + V D + R+HEI
Sbjct: 113 SRWGKIMDAQIMVDHNTKRS--RGFGFITFESYKSVEDVIRIRNHEI 157
>gi|414883904|tpg|DAA59918.1| TPA: hypothetical protein ZEAMMB73_017923 [Zea mays]
Length = 415
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E + + LR YF RFG + + + + TG RGFGFV F + VA+RV+
Sbjct: 16 KLFVGGISWETSEDRLREYFGRFGEVTEAAIMRDRSTGRARGFGFVVFTDAAVAERVTME 75
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V A P DD
Sbjct: 76 KHMIDGRMVEAKKAVPRDD 94
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 35/137 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F A E + ++ H + G V +A P++D
Sbjct: 48 RDRSTGRARGFGFVVFTDAAVAERVTMEKHMIDGRMVEAKKAVPRDDH------------ 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
I + + + G+P G G + +KIFVG LP T D RRYF
Sbjct: 96 -----SIVSKSNGRSTGSP----------GPGRT-----RKIFVGGLPSSITEADFRRYF 135
Query: 123 SRFGRILDVY---VPKR 136
+FG I DV VPK
Sbjct: 136 EQFGVITDVVKKAVPKE 152
>gi|402887861|ref|XP_003907299.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Papio anubis]
Length = 637
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 328 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 383
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 384 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 403
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 404 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 463
Query: 178 DAGPS 182
P+
Sbjct: 464 VMSPT 468
>gi|443705196|gb|ELU01851.1| hypothetical protein CAPTEDRAFT_169740 [Capitella teleta]
Length = 186
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSV-ENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D ++ RG GFIT+ +A+SV E H + V RA P+ED RP MS
Sbjct: 2 RDPMTRRSRGFGFITYKTAESVDEAQKARPHTIDKRQVEPKRAVPREDSGRPEAHMS--- 58
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + ++ T LR Y
Sbjct: 59 ---------------------------------------LKKIFVGGIKEDTTEAHLREY 79
Query: 122 FSRFGRI--LDVYVPKRTGH-RGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 175
FS +G I +D+ K T RGFGF+TF + D+ V +R H I G + + A P
Sbjct: 80 FSEYGPIESIDIITDKETKRSRGFGFITFDDYDPVDKIVMQRHHMINGHKSEVKKALP 137
>gi|350645456|emb|CCD59808.1| tar DNA-binding protein, putative [Schistosoma mansoni]
Length = 344
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ VG + + TA LR YFS+FG +LDV++PK R F FV+F + VA +
Sbjct: 189 QEVSRKVHVGGITESITATVLRDYFSQFGAVLDVFIPK--PFRSFAFVSFEDPEVAAELL 246
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP--------MRTYGR---- 205
+ I G V+I SA P ++N M FG P M +G
Sbjct: 247 GKDQVIEGVCVSIGSAVPKLHPQQNRNGPMYPNSHFGNSHNPWAWQYNPAMNVHGTRDFN 306
Query: 206 --MYGSLDFDDWGYGMGSGRP 224
MY S+ GY M S P
Sbjct: 307 PGMYNSMH----GYNMASHSP 323
>gi|222623166|gb|EEE57298.1| hypothetical protein OsJ_07373 [Oryza sativa Japonica Group]
Length = 459
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIF+G LP++ T + YF ++G I+D + K RGFGF+TFA+ V DRV
Sbjct: 16 KIFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRVIED 75
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G++V I P A P ++F
Sbjct: 76 NHVINGKEVEIKRTIP-KGAAPLKDF 100
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 48/165 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GFITFA V+ ++ D H + G V + R PK
Sbjct: 48 KDRFTQKPRGFGFITFADPAVVDRVIEDNHVINGKEVEIKRTIPK--------------- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA L D KKIFVG LP ++ + +F
Sbjct: 93 ----------------GAAPLKDF-------------KTKKIFVGGLPSALKEDEFKEFF 123
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSHEI 163
S+FG++++ + + RGFGFV F AE+ V + ++++ + I
Sbjct: 124 SKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLAKKGNMI 168
>gi|119592075|gb|EAW71669.1| TAR DNA binding protein, isoform CRA_a [Homo sapiens]
Length = 367
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 144 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 201
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 202 IIKGISVHISNAEP 215
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 44 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 89
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 90 -----------------GMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELRE 132
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 133 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 192
Query: 177 D 177
D
Sbjct: 193 D 193
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 12 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 71
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 72 RPHTLDGRNIDPKPCTP 88
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 96 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 141
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 142 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 184
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 185 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 244
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 245 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 284
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRV 156
G+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 62 GRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 121
Query: 157 SRRSHEICGQQVAIDSATP 175
+ R H + G+ + TP
Sbjct: 122 ASRPHTLDGRNIDPKPCTP 140
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E T E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 94 GESSQRIG-KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE 149
G S QR +K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F
Sbjct: 47 GASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTN 106
Query: 150 EVVADRVSRRSHEICGQQ 167
D+VS I +
Sbjct: 107 TEAIDKVSAVDEHIINSK 124
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 39/186 (20%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ +D+ + RG GF+ F+ + + +++D H + G A P+++ H
Sbjct: 37 IMRDRTTGRARGFGFVVFSDPNCADRVLLDKHTIDGRV-----AVPRDE--------QHS 83
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
A + ++ PG G +S + KKIFVG L T +D R+
Sbjct: 84 VVKANGSAVAG---------------PG-----GHASSKT-KKIFVGGLGSNVTEDDFRK 122
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPL 176
YF +FG I DV V RGFGF+TF E D V ++ HE+ + V + A P
Sbjct: 123 YFEQFGTITDVVVMYDHATQRPRGFGFITFDTEEAVDNVLHKTFHELKEKMVEVKRAVPK 182
Query: 177 D-DAGP 181
+ AGP
Sbjct: 183 ELSAGP 188
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G + E T E L+ YF +G +++ + + TG RGFGFV F++ ADRV
Sbjct: 7 KLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRVLLD 66
Query: 160 SHEICG-------QQVAIDSATPLDDAGPSQNFMMNAAETF-GGYGGPM-----RTYGRM 206
H I G +Q ++ A AGP + + F GG G + R Y
Sbjct: 67 KHTIDGRVAVPRDEQHSVVKANGSAVAGPGGHASSKTKKIFVGGLGSNVTEDDFRKYFEQ 126
Query: 207 YGSLDFDDWGYGMGSGRP 224
+G++ Y + RP
Sbjct: 127 FGTITDVVVMYDHATQRP 144
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 78/191 (40%), Gaps = 55/191 (28%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF + ++ H + G V V R P+ D N +
Sbjct: 464 RGFGFVTFCDPAIADMVLKIDHIIDGRAVEVKRTVPRAD---------------MNDKMV 508
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
+ T KKIFVG +P T E+ + YFS FGRI++
Sbjct: 509 SRT----------------------------KKIFVGGIPPGLTEEEFKDYFSSFGRIIE 540
Query: 131 V-----YVPKRTGHRGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATPLDDAGPSQ 183
Y KR+ RGFGF+TF E + + R HE+ G+QV I A P A
Sbjct: 541 HQIMIDYKTKRS--RGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVA---Y 595
Query: 184 NFMMNAAETFG 194
+F N+ +T G
Sbjct: 596 DFNSNSGQTSG 606
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E T + R YFS++G I D + + K TG RGFGFVTF + +AD V +
Sbjct: 424 KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 483
Query: 160 SHEICGQQVAIDSATPLDD 178
H I G+ V + P D
Sbjct: 484 DHIIDGRAVEVKRTVPRAD 502
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMV--DTHELGGSTVVVDRATPK 47
D +K RG GFITF + DSVEN+ HELGG V + +A PK
Sbjct: 546 DYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPK 591
>gi|194388816|dbj|BAG61425.1| unnamed protein product [Homo sapiens]
Length = 330
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 107 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 164
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 165 IIKGISVHISNAEP 178
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH RGFGFV F E
Sbjct: 17 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSRGFGFVRFTEYETQV 75
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 76 KVMSQRHMIDG 86
>gi|38198639|ref|NP_938178.1| TAR DNA-binding protein 43 [Danio rerio]
gi|27882272|gb|AAH44405.1| TAR DNA binding protein, like [Danio rerio]
gi|182888816|gb|AAI64253.1| Tardbpl protein [Danio rerio]
Length = 303
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G + DV++PK R F FVTFA++ VA
Sbjct: 196 SRKVFVGRCTEDMTADELRQFFMQYGEVTDVFIPK--PFRAFAFVTFADDQVA------- 246
Query: 161 HEICGQQVAID-SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMY 207
+CG+ + I ++ + +A P N N F + G + M+
Sbjct: 247 QSLCGEDLIIKGTSVHISNAEPKHN---NIHHLFSNFPGRSPSLAAMF 291
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YF FG ++ V V + ++G+ +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFGTFGEVIMVQVKRDAKSGNSKGFGFVRFTDYETQI 160
Query: 155 RVSRRSHEICGQQVAIDSATP-----LDDAGPSQ 183
+V + H I G+ D P L+ AGP +
Sbjct: 161 KVMSQRHMIDGRWC--DCKLPNSKYFLEQAGPDE 192
>gi|386771324|ref|NP_001246813.1| RNA-binding protein 6, isoform F [Drosophila melanogaster]
gi|383291984|gb|AFH04484.1| RNA-binding protein 6, isoform F [Drosophila melanogaster]
Length = 225
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 61/124 (49%), Gaps = 21/124 (16%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED++ YF +FG I D + K+T HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSLDFDDWGY 217
HEI + V A P + P+ N A+T R G +D+ +
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPA-----NLAKT------------RAAGRSAYDNIMW 108
Query: 218 GMGS 221
G+G+
Sbjct: 109 GLGT 112
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D V+ + + HE+ V +A PKE
Sbjct: 40 DKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 85
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 75/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCDIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YFS FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGSRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 245 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 290
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 291 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 333
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 334 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 393
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 394 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 433
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 213 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 272
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 273 RPHTLDGRNIDPKPCTP 289
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|193575575|ref|XP_001951661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 303
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 48/180 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ M + H++ G V RA P++D
Sbjct: 51 KDPVTKRSRGFGFITYSKASMVDDAMANRPHKIDGREVETKRAVPRDD------------ 98
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
D P + KK+FV + ++A EDL+ Y
Sbjct: 99 ----------------------IDKPDIAW--------TVKKMFVSGIKEQA-EEDLKEY 127
Query: 122 FSRFGRILDVYV--PKRTGHR-GFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F ++G IL++ + K TG R GFGF+ F + D+ V ++HE+ G ++ + A D
Sbjct: 128 FGQYGNILNIQIIADKETGQRKGFGFIEFDDSDSVDKAVLIKTHEVSGSKLEVKKAVSKD 187
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 28/141 (19%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T + L+ +F ++G I+DV V P RGFGF+T+++ +V D ++
Sbjct: 18 RKLFIGGLNYTTTNDSLKEFFEKWGDIVDVVVMKDPVTKRSRGFGFITYSKASMVDDAMA 77
Query: 158 RRSHEICGQQVAIDSATPLDD---------------AGPSQNFMMNAAETFGGYGGPMRT 202
R H+I G++V A P DD +G + + E FG YG +
Sbjct: 78 NRPHKIDGREVETKRAVPRDDIDKPDIAWTVKKMFVSGIKEQAEEDLKEYFGQYGNILNI 137
Query: 203 ---------YGRMYGSLDFDD 214
+ +G ++FDD
Sbjct: 138 QIIADKETGQRKGFGFIEFDD 158
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YFS FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 45 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 90
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 91 -----------------GMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELRE 133
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 134 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 193
Query: 177 D 177
D
Sbjct: 194 D 194
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVS 157
+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 12 EKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 71
Query: 158 RRSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 72 SRPHTLDGRNIDPKPCTP 89
>gi|42542491|gb|AAH66430.1| Tardbpl protein [Danio rerio]
Length = 298
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G + DV++PK R F FVTFA++ VA
Sbjct: 191 SRKVFVGRCTEDMTADELRQFFMQYGEVTDVFIPK--PFRAFAFVTFADDQVA------- 241
Query: 161 HEICGQQVAID-SATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMY 207
+CG+ + I ++ + +A P N N F + G + M+
Sbjct: 242 QSLCGEDLIIKGTSVHISNAEPKHN---NIHHLFSNFPGRSPSLAAMF 286
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YF FG ++ V V + ++G+ +GFGFV F +
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFGTFGEVIMVQVKRDAKSGNSKGFGFVRFTDYETQI 160
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P AGP +
Sbjct: 161 KVMSQRHMIDGRWC--DCKLPNSKAGPDE 187
>gi|126328722|ref|XP_001364507.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Monodelphis
domestica]
Length = 302
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM 200
I G V I +A P ++ N + + FGG G +
Sbjct: 248 LIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPGIL 283
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITF SV+ + + H++ G V V RA P++ +P G+ +G+
Sbjct: 154 RGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQPPGQPGASQWGS-RVVP 212
Query: 70 SAATRYAALGAPT 82
SAA +A PT
Sbjct: 213 SAANGWAGQPPPT 225
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 71/177 (40%), Gaps = 49/177 (27%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D +K RG GF+TF AD+VE ++ H+L + A PK+ + V R
Sbjct: 38 DPITKRSRGFGFVTFTDADNVEKVLQSGPHKLDDKNIDAKVAYPKKQRQKLVTRT----- 92
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KK+FVG + T ED+ +YF
Sbjct: 93 ---------------------------------------KKVFVGGIATNTTTEDITKYF 113
Query: 123 SRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
FG+I D + K T HRGFGFV F E AD+ HEI ++V + A P
Sbjct: 114 ETFGQIEDAMLMFDKSTQRHRGFGFVIFESEDSADKACEVHFHEINNKKVEVKKAQP 170
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV 156
+ K+F+G L E LR YF ++G I + + P RGFGFVTF + AD V
Sbjct: 2 VNSKMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTD---ADNV 58
Query: 157 SR 158
+
Sbjct: 59 EK 60
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVEN-LMVDTHELGGSTVVVDRATPKE 48
D+ ++ HRG GF+ F S DS + V HE+ V V +A PKE
Sbjct: 127 DKSTQRHRGFGFVIFESEDSADKACEVHFHEINNKKVEVKKAQPKE 172
>gi|56682933|ref|NP_001008546.1| TAR DNA-binding protein 43 isoform 4 [Mus musculus]
gi|33086854|gb|AAP92690.1| TARDBP S8 [Mus musculus]
Length = 302
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 6/100 (6%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPM 200
I G V I +A P ++ N + + FGG G +
Sbjct: 248 LIIKGISVHISNAEPKHNS----NRQLERSGRFGGNPGIL 283
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|431906336|gb|ELK10533.1| TAR DNA-binding protein 43 [Pteropus alecto]
Length = 391
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 168 RKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 225
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 226 IIKGISVHISNAEP 239
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE 149
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTE 154
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P + S KIFVG +P +LR Y
Sbjct: 89 -----------------GMQPERTRPKEGWKGPRSDNSKSNKIFVGGIPHNCGETELREY 131
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 132 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|71894865|ref|NP_001026049.1| TAR DNA-binding protein 43 [Gallus gallus]
gi|82233907|sp|Q5ZLN5.1|TADBP_CHICK RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|53129069|emb|CAG31358.1| hypothetical protein RCJMB04_5g9 [Gallus gallus]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++L+++F+++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELQQFFAQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F +
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 33 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 78
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 79 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 121
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 122 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 181
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 182 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 221
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 61 RPHTLDGRNIDPKPCTP 77
>gi|193620359|ref|XP_001948343.1| PREDICTED: TAR DNA-binding protein 43-like [Acyrthosiphon pisum]
Length = 365
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEV 151
+ + ++ +K+F+G++ ++ + L+ YF +FG I D+++P+ HRGF FVTF + +
Sbjct: 176 SKDKHVNKVPRKVFIGQVSEDVDEDALKNYFIKFGEISDLFLPR--PHRGFAFVTFTDPL 233
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDDAGPSQN 184
A +V + H++ V A P + P N
Sbjct: 234 SAQKVIGKDHKVGDCCVVCTEAIPKKEMAPKWN 266
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRI--LDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+ V LP + T EDL++YF++FG++ + +G+GFV F + RV H
Sbjct: 103 LVVLGLPWKVTEEDLKKYFTKFGQVEYTQIKTDLNGKSKGYGFVRFKHKKSQVRVMLERH 162
Query: 162 EICGQQVAI 170
I G+ +
Sbjct: 163 NIEGRWCDV 171
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P G
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR--GMQPERSRPREG 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ R E+S+ KIFVG +P +L+ Y
Sbjct: 101 WQQKEP-------------------------RTENSR--SNKIFVGGIPHNCGETELKEY 133
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 134 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 193
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 38 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 83
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 84 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 126
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 127 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 186
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 187 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 226
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 6 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 65
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 66 RPHTLDGRNIDPKPCTP 82
>gi|348571399|ref|XP_003471483.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Cavia
porcellus]
Length = 304
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR + TA++LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTDDMTADELRQFFSQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|321476369|gb|EFX87330.1| hypothetical protein DAPPUDRAFT_97182 [Daphnia pulex]
Length = 266
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 99 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSR 158
++ K+FVGR ++ TA+DLR YF +FG + DV++PK R F FVTF + VA +
Sbjct: 190 QVPCKVFVGRCTEDITADDLRDYFCKFGEVTDVFIPK--PFRAFSFVTFLDPEVAQSLCG 247
Query: 159 RSHEICGQQVAIDSA 173
H I G + A++
Sbjct: 248 EDHIIKGSRCALEQV 262
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
Query: 85 DHPGSFYG---RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH 139
DHP + R E + I +G LP + + +DLR YF FG +L V K +TG
Sbjct: 88 DHPENSTAKTKRMEMRLKCSDLIVLG-LPWKTSEQDLRVYFENFGELLMAQVKKDAKTGQ 146
Query: 140 -RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLDDAG-----PSQNFMMNAAE 191
+GFGF+ FA RV + H I G+ D P AG P + F+ E
Sbjct: 147 SKGFGFIRFANYDSQVRVLSQRHLIDGRWC--DVKIPNSKAGGTPQVPCKVFVGRCTE 202
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 49/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A V+ ++ DTH + G V + R PK
Sbjct: 2061 KDRKTGQPRGFGFVTYADLSVVDQVIQDTHVINGKQVEIKRTIPK--------------- 2105
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+GA KKIFVG +P T E+ + +F
Sbjct: 2106 -------------GAIGAKDFKT----------------KKIFVGGIPATVTEEEFKDFF 2136
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSR-RSHEICGQQVAIDSA 173
+++G + D + + + RGFGFVTF E+ V D +S+ E+ G QV I A
Sbjct: 2137 TQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELAGAQVEIKKA 2192
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSR 158
+KIF+G L +E T+ ++F ++G I D + K +TG RGFGFVT+A+ V D+V +
Sbjct: 2028 RKIFIGGLARETTSAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQ 2087
Query: 159 RSHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 2088 DTHVINGKQVEIKRTIP 2104
>gi|348571401|ref|XP_003471484.1| PREDICTED: TAR DNA-binding protein 43-like isoform 3 [Cavia
porcellus]
Length = 295
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR + TA++LR++FS++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTDDMTADELRQFFSQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 33 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 78
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 79 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 121
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 122 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 181
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 182 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 221
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 61 RPHTLDGRNIDPKPCTP 77
>gi|343172818|gb|AEL99112.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
KKIFVG LP T E R+YF FG + DV + RGFGF++F E DRV +
Sbjct: 35 KKIFVGGLPPSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDRVLQ 94
Query: 159 RS-HEICGQQVAIDSATPLD 177
+ H++ G+QV + A P D
Sbjct: 95 STFHDLDGKQVEVKRALPKD 114
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ ++ RG GFI+F S D+V+ ++ T H+L G V V RA PK+
Sbjct: 69 DQNTQRPRGFGFISFDSEDAVDRVLQSTFHDLDGKQVEVKRALPKD 114
>gi|343172816|gb|AEL99111.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
KKIFVG LP T E R+YF FG + DV + RGFGF++F E DRV +
Sbjct: 35 KKIFVGGLPPSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDRVLQ 94
Query: 159 RS-HEICGQQVAIDSATPLD 177
+ H++ G+QV + A P D
Sbjct: 95 STFHDLDGKQVEVKRALPKD 114
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ ++ RG GFI+F S D+V+ ++ T H+L G V V RA PK+
Sbjct: 69 DQNTQRPRGFGFISFDSEDAVDRVLQSTFHDLDGKQVEVKRALPKD 114
>gi|281341358|gb|EFB16942.1| hypothetical protein PANDA_012747 [Ailuropoda melanoleuca]
Length = 383
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 20 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 65
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 66 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 108
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 109 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 168
Query: 177 D 177
D
Sbjct: 169 D 169
>gi|441656584|ref|XP_003277097.2| PREDICTED: DAZ-associated protein 1 [Nomascus leucogenys]
gi|119589910|gb|EAW69504.1| DAZ associated protein 1, isoform CRA_d [Homo sapiens]
Length = 337
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 2 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 47
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 48 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 90
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 91 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 150
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 151 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 190
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 68 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 113
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 114 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 156
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 157 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 216
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 217 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 256
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRV 156
G+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 34 GRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 93
Query: 157 SRRSHEICGQQVAIDSATP 175
+ R H + G+ + TP
Sbjct: 94 ASRPHTLDGRNIDPKPCTP 112
>gi|410966016|ref|XP_003989534.1| PREDICTED: TAR DNA-binding protein 43 [Felis catus]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLD 177
F +FG++ D + K T HRGFGFVTF E++V HEI + V A P +
Sbjct: 129 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YFS FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|355763816|gb|EHH62216.1| hypothetical protein EGM_20453 [Macaca fascicularis]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR +F+R+G++++V Y ++ RGFGF++F +E DR V+
Sbjct: 104 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 159 RSHEICGQQVAIDSATPLDDA 179
+ G+QV I A P D +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSS 184
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E T E+L+RYF R+G ++D V K + RGFGFVTF++ V +
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 160 -SHEICGQQVAIDSATPLDDAGP 181
H++ G+ + P P
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKP 96
>gi|332250292|ref|XP_003274288.1| PREDICTED: TAR DNA-binding protein 43 [Nomascus leucogenys]
gi|402852911|ref|XP_003891150.1| PREDICTED: TAR DNA-binding protein 43 [Papio anubis]
gi|380783713|gb|AFE63732.1| TAR DNA-binding protein 43 [Macaca mulatta]
gi|384941330|gb|AFI34270.1| TAR DNA-binding protein 43 [Macaca mulatta]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|270014210|gb|EFA10658.1| hypothetical protein TcasGA2_TC016295 [Tribolium castaneum]
Length = 300
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED++ YF +FG I D + K+T HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQ 183
HEI + V A P + P+
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPAN 91
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D V+ + + HE+ V +A PKE
Sbjct: 40 DKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 85
>gi|197097374|ref|NP_001127597.1| TAR DNA-binding protein 43 [Pongo abelii]
gi|75070499|sp|Q5R5W2.1|TADBP_PONAB RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|55732302|emb|CAH92854.1| hypothetical protein [Pongo abelii]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|130750552|gb|ABO32290.1| TDP43 [Homo sapiens]
Length = 416
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|6678271|ref|NP_031401.1| TAR DNA-binding protein 43 [Homo sapiens]
gi|114553910|ref|XP_514380.2| PREDICTED: TAR DNA-binding protein 43 isoform 3 [Pan troglodytes]
gi|397503024|ref|XP_003822136.1| PREDICTED: TAR DNA-binding protein 43 [Pan paniscus]
gi|20140568|sp|Q13148.1|TADBP_HUMAN RecName: Full=TAR DNA-binding protein 43; Short=TDP-43
gi|901998|gb|AAA70033.1| TAR DNA-binding protein-43 [Homo sapiens]
gi|4886441|emb|CAB43367.1| hypothetical protein [Homo sapiens]
gi|47939520|gb|AAH71657.1| TARDBP protein [Homo sapiens]
gi|49065494|emb|CAG38565.1| TARDBP [Homo sapiens]
gi|63100767|gb|AAH95435.1| TAR DNA binding protein [Homo sapiens]
gi|119592076|gb|EAW71670.1| TAR DNA binding protein, isoform CRA_b [Homo sapiens]
gi|119592077|gb|EAW71671.1| TAR DNA binding protein, isoform CRA_b [Homo sapiens]
gi|130750566|gb|ABO32291.1| TDP43 splice variant 1 [Homo sapiens]
gi|167774073|gb|ABZ92471.1| TAR DNA binding protein [synthetic construct]
gi|208965598|dbj|BAG72813.1| TAR DNA binding protein [synthetic construct]
gi|410251008|gb|JAA13471.1| TAR DNA binding protein [Pan troglodytes]
gi|410302770|gb|JAA29985.1| TAR DNA binding protein [Pan troglodytes]
gi|410342291|gb|JAA40092.1| TAR DNA binding protein [Pan troglodytes]
gi|410342293|gb|JAA40093.1| TAR DNA binding protein [Pan troglodytes]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|432857373|ref|XP_004068664.1| PREDICTED: TAR DNA-binding protein 43-like [Oryzias latipes]
Length = 402
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T +DLR++F ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKVFVGRCTEDMTTDDLRQFFMQYGEVTDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGVSVHISNAEP 263
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+ V LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F E ++V +
Sbjct: 107 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFTEYEAQEKVISQR 166
Query: 161 HEICGQQVAIDSATPLDDAGPSQ 183
H I G+ D P GP +
Sbjct: 167 HMIDGRWC--DCKLPNSKQGPDE 187
>gi|326932427|ref|XP_003212319.1| PREDICTED: TAR DNA-binding protein 43-like [Meleagris gallopavo]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++L+++F+++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELQQFFAQYGEVVDVFIPKP--FRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F +
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|195327757|ref|XP_002030584.1| GM24493 [Drosophila sechellia]
gi|194119527|gb|EDW41570.1| GM24493 [Drosophila sechellia]
Length = 343
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 19/119 (15%)
Query: 62 YGAYNAYISAAT-------RYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEAT 114
+G+YNA + + R+ + P+ RG +Q GK +FVGR ++
Sbjct: 155 FGSYNAQMRVLSKRHLIDGRWCEVKVPS---------SRGIGNQVPGK-VFVGRCTEDIG 204
Query: 115 AEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSA 173
AEDLR YFS+FG +++V +PK RGF FVTF + + + H I G V + SA
Sbjct: 205 AEDLREYFSQFGDVIEVVIPK--PFRGFSFVTFLDPYIPQLLWGEDHIIKGVSVRVSSA 261
>gi|189065487|dbj|BAG35326.1| unnamed protein product [Homo sapiens]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|117644607|emb|CAL37794.1| hypothetical protein [synthetic construct]
Length = 414
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|297805630|ref|XP_002870699.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
gi|297316535|gb|EFH46958.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG L +E T+ + ++F ++G I D + K +TG RGFGFVT+A+ V D+V +
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD 102
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 103 NHIIIGKQVEIKRTIP 118
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A + V+ ++ D H + G V + R P+ G MS +
Sbjct: 75 KDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPR-------GSMSSNDF 127
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KKIFVG +P ++ + +F
Sbjct: 128 KT-------------------------------------KKIFVGGIPASVDDDEFKEFF 150
Query: 123 SRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
+FG + + + + TG RGFGFVT+ E + D + + + E+ G QV I A P
Sbjct: 151 MQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEP 208
>gi|108996989|ref|XP_001102660.1| PREDICTED: TAR DNA-binding protein 43 [Macaca mulatta]
Length = 414
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 34/180 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P G
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR--GMQPERTRPREG 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ R E+S+ KIFVG +P +LR Y
Sbjct: 101 WQQKGP-------------------------RTENSR--SNKIFVGGIPHNCGETELREY 133
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F RFG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 134 FKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 193
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P + S KIFVG +P +LR Y
Sbjct: 89 -----------------GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREY 131
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 132 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P + S KIFVG +P +LR Y
Sbjct: 89 -----------------GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREY 131
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 132 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 192 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 231
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 35 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 80
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P + S KIFVG +P +LR Y
Sbjct: 81 -----------------GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREY 123
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 124 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 183
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 3 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 62
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 63 RPHTLDGRNIDPKPCTP 79
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 192 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 231
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|195590439|ref|XP_002084953.1| GD12565 [Drosophila simulans]
gi|194196962|gb|EDX10538.1| GD12565 [Drosophila simulans]
Length = 319
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 62 YGAYNAYISA-ATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+G+Y+A + + R+ G P S RG +Q GK +FVGR ++ AEDLR
Sbjct: 155 FGSYDAQMRVLSKRHLIDGRWCEVKVPSS---RGIGNQVPGK-VFVGRCTEDIDAEDLRE 210
Query: 121 YFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSA----TPL 176
YFS+FG +++V +PK RGF FVTF + + + H I G V + SA P
Sbjct: 211 YFSQFGEVIEVVIPK--PFRGFSFVTFLDPYIPQLLWGEDHIIKGVSVRVSSADKRVVPK 268
Query: 177 DDAG---------PSQNFMMNAAETF 193
+ P NF M+ A F
Sbjct: 269 KNQQIQSNNFNMHPGNNFRMHPANNF 294
>gi|125600879|gb|EAZ40455.1| hypothetical protein OsJ_24907 [Oryza sativa Japonica Group]
Length = 427
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 35/151 (23%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+KIFVG L T + RRYF +FG I DV V RGFGF+T+ E D+
Sbjct: 63 RKIFVGGLASNVTEVEFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALH 122
Query: 159 RS-HEICGQQVAIDSATPLDDA-GPS-------QNFMMNAAETF-------------GGY 196
++ HE+ G+ V + A P + + GP+ QN+ M+ +F GGY
Sbjct: 123 KNFHELNGKMVEVKRAVPKEQSPGPAARSPAGGQNYAMSRVHSFLNGFNQGYNPNPIGGY 182
Query: 197 GGPMRTYGRMYGSLD-----FDDW--GYGMG 220
G MR GR YG L F + GYGMG
Sbjct: 183 G--MRVDGR-YGLLTGARNGFSSFGPGYGMG 210
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVEN-LMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
D ++ RG GFIT+ S D+V+ L + HEL G V V RA PKE P R GG
Sbjct: 97 DHNTQRPRGFGFITYDSEDAVDKALHKNFHELNGKMVEVKRAVPKEQSPGPAARSPAGG 155
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|15242719|ref|NP_198865.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
gi|9758076|dbj|BAB08520.1| unnamed protein product [Arabidopsis thaliana]
gi|22531255|gb|AAM97131.1| ribonucleoprotein-like [Arabidopsis thaliana]
gi|332007170|gb|AED94553.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
Length = 423
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG L +E T+ + ++F ++G I D + K +TG RGFGFVT+A+ V D+V +
Sbjct: 43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD 102
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 103 NHIIIGKQVEIKRTIP 118
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+T+A + V+ ++ D H + G V + R P+ G MS +
Sbjct: 75 KDRKTGQPRGFGFVTYADSSVVDKVIQDNHIIIGKQVEIKRTIPR-------GSMSSNDF 127
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
KKIFVG +P ++ + +F
Sbjct: 128 KT-------------------------------------KKIFVGGIPSSVDDDEFKEFF 150
Query: 123 SRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
+FG + + + + TG RGFGFVT+ E + D + + + E+ G QV I A P
Sbjct: 151 MQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEP 208
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 36/180 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
G P + S KIFVG +P +LR Y
Sbjct: 89 -----------------GMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELREY 131
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 132 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 191
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTPPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 40 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 85
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 86 -----------------GMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELRE 128
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 129 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 188
Query: 177 D 177
D
Sbjct: 189 D 189
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVS 157
+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 7 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 66
Query: 158 RRSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 67 SRPHTLDGRNIDPKPCTP 84
>gi|348521706|ref|XP_003448367.1| PREDICTED: TAR DNA-binding protein 43-like [Oreochromis niloticus]
Length = 402
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T +DLR++F ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKVFVGRCTEDMTTDDLRQFFMQYGEVTDVFIPK--PFRAFAFVTFADDQVAQSLCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGVSVHISNAEP 263
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+ V LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F E ++V +
Sbjct: 107 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFTEYEAQEKVISQR 166
Query: 161 HEICGQQVAIDSATPLDDAGPSQ 183
H I G+ D P GP +
Sbjct: 167 HMIDGRWC--DCKLPNSKQGPDE 187
>gi|26350443|dbj|BAC38861.1| unnamed protein product [Mus musculus]
Length = 301
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 109 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 154
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 155 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 197
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 198 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 257
Query: 177 D 177
D
Sbjct: 258 D 258
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 96 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EV 151
S Q KK+FVG L T E LR YFS++G ++D + K RGFGFV F +
Sbjct: 70 SEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNC 129
Query: 152 VADRVSRRSHEICGQQVAIDSATP 175
V ++ R H + G+ + TP
Sbjct: 130 VGTVLASRPHTLDGRNIDPKPCTP 153
>gi|56682929|ref|NP_001008545.1| TAR DNA-binding protein 43 isoform 2 [Mus musculus]
gi|354496956|ref|XP_003510589.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Cricetulus
griseus]
gi|33086856|gb|AAP92691.1| TARDBP S9 [Mus musculus]
Length = 304
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|148223810|ref|NP_001082088.1| DAZ-associated protein 1 [Xenopus laevis]
gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1; AltName:
Full=Proline-rich Vg1 mRNA-binding protein
gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis]
Length = 360
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 34/180 (18%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P G
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR--GMQPERSRPREG 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ R E+S+ KIFVG +P +L+ Y
Sbjct: 101 WQQKEP-------------------------RTENSR--SNKIFVGGIPHNCGETELKEY 133
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F+RFG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 134 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 193
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|126328724|ref|XP_001364432.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Monodelphis
domestica]
Length = 304
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|16266931|dbj|BAB70469.1| Musashi1 [Homo sapiens]
Length = 179
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E + ++V
Sbjct: 43 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 102
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 103 IHFHEINNKMVECKKAQPKEVMSPT 127
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D VE + + HE+ V +A PKE
Sbjct: 77 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 122
>gi|257222468|gb|ACV52544.1| TDP-43 variant 3 [Mus musculus]
Length = 295
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|198420439|ref|XP_002131647.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 442
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 47/186 (25%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D +K RG GF+TF V+ +M + H+L G TV RA +ED +P
Sbjct: 55 DPKTKKSRGFGFVTFKRIKMVDAVMSERPHKLDGRTVTPKRAVSREDSEKP--------- 105
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA+ KKIFVG + + T + L+ +F
Sbjct: 106 GAHATV---------------------------------KKIFVGGIKDDTTEQHLKDHF 132
Query: 123 SRFG--RILDVYVPKRT-GHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLDD 178
+FG +++V + T RGF FVTFA+ D+ VS++ H I G + A P ++
Sbjct: 133 RKFGIVELVEVMEDRETRKKRGFAFVTFADHDPVDKIVSQKYHTINGHNCEVRKALPKNE 192
Query: 179 AGPSQN 184
+N
Sbjct: 193 LDKHKN 198
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
+K+F+G L + T E L YF++FG + D V PK RGFGFVTF + D V S
Sbjct: 21 RKLFIGGLSFDTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKMVDAVMS 80
Query: 158 RRSHEICGQQVAIDSATPLDDA 179
R H++ G+ V A +D+
Sbjct: 81 ERPHKLDGRTVTPKRAVSREDS 102
>gi|126328726|ref|XP_001364580.1| PREDICTED: TAR DNA-binding protein 43-like isoform 4 [Monodelphis
domestica]
Length = 295
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|355723255|gb|AES07833.1| TAR DNA binding protein isoform 4 [Mustela putorius furo]
Length = 280
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|302850790|ref|XP_002956921.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
gi|300257802|gb|EFJ42046.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
Length = 444
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 72/177 (40%), Gaps = 43/177 (24%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ F S + + ++ H + V +A PKE+ P +
Sbjct: 48 RGFGFVVFESPEVADKVVATKHTIDRREVEAKKAVPKEET--PEEKQ------------- 92
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
+G + QR KKIFVG L LR++FS+FG + D
Sbjct: 93 ----------------------QGSAPQRT-KKIFVGGLAPSVDEAQLRQHFSQFGTVED 129
Query: 131 ---VYVPKRTGHRGFGFVTFAEEVVADRVSRRS--HEICGQQVAIDSATPLDDAGPS 182
+Y + RGFGFVTFAEE DRV I + + + +A P D P+
Sbjct: 130 AVVMYDHENKRPRGFGFVTFAEEDAVDRVFSHGAVQTIADKPIEVKAAVPRDQMPPT 186
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E LR YF FG + + +V + RGFGFV F VAD+V
Sbjct: 8 KVFIGGLSWETTGEKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVADKVVAT 67
Query: 160 SHEICGQQVAIDSATPLDD 178
H I ++V A P ++
Sbjct: 68 KHTIDRREVEAKKAVPKEE 86
>gi|225708396|gb|ACO10044.1| TAR DNA-binding protein 43 [Osmerus mordax]
Length = 304
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 87 PGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVT 146
P S G E + +KIFVGR ++ T ++LR++F ++G + DV++PK R F FVT
Sbjct: 185 PNSKVGPDEPQR--CRKIFVGRCTEDMTTDELRQFFMQYGEVTDVFIPK--PFRAFAFVT 240
Query: 147 FAEEVVADRVSRRSHEICGQQVAIDSATP-LDDAGPSQNFMMNAAETFGGYGGPMRTYGR 205
FA++ VA +CG+ + I + + +A P N N + F + G +
Sbjct: 241 FADDQVA-------QALCGEDLIIKGVSVHISNAEPKHN---NIQQLFSNFPGRSPSLAA 290
Query: 206 MY 207
M+
Sbjct: 291 MF 292
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + + +DL+ YFS FG ++ V + + +TG+ +GFGFV F E
Sbjct: 108 QKTSDLIVLG-LPWKTSEQDLKDYFSTFGEVIMVQIKRDVKTGNSKGFGFVRFTEYETQS 166
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P GP +
Sbjct: 167 KVISQRHMIDGRWC--DCKLPNSKVGPDE 193
>gi|58865526|ref|NP_001011979.1| TAR DNA binding protein [Rattus norvegicus]
gi|53734262|gb|AAH83752.1| Tardbp protein [Rattus norvegicus]
gi|149024637|gb|EDL81134.1| rCG31562, isoform CRA_c [Rattus norvegicus]
Length = 285
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGE-SSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 192 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 231
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|56682931|ref|NP_001003899.1| TAR DNA-binding protein 43 isoform 3 [Mus musculus]
gi|354496954|ref|XP_003510588.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Cricetulus
griseus]
gi|20071690|gb|AAH27105.1| TAR DNA binding protein [Mus musculus]
gi|33086850|gb|AAP92688.1| TARDBP S6 [Mus musculus]
gi|148682883|gb|EDL14830.1| mCG16669, isoform CRA_a [Mus musculus]
Length = 295
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 77 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 122
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 123 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 165
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 166 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 225
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 226 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 265
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADR 155
I K+FVG L T E LR YFS++G ++D + K RGFGFV F + V
Sbjct: 42 ISGKLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 101
Query: 156 VSRRSHEICGQQVAIDSATP 175
++ R H + G+ + TP
Sbjct: 102 LASRPHTLDGRNIDPKPCTP 121
>gi|149024634|gb|EDL81131.1| rCG31562, isoform CRA_a [Rattus norvegicus]
gi|149024636|gb|EDL81133.1| rCG31562, isoform CRA_a [Rattus norvegicus]
Length = 295
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D 177
D
Sbjct: 192 D 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|390354400|ref|XP_001199490.2| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 318
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 84/214 (39%), Gaps = 54/214 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D ++ RG GF+TF+ VE ++ THE+ V A PK +PV +
Sbjct: 54 RDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + T L+++
Sbjct: 110 ----------------------------------------KKIFVGGIAASTTEPHLKKF 129
Query: 122 FSRFGRILDVYVP-KRTG--HRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
F ++G++ +V + RT HRGFGFV F E D V HE+ G+ V + A P +
Sbjct: 130 FEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPKE 189
Query: 178 -----DAGPSQNFMMNAAETFGGYGGPMRTYGRM 206
+A ++ MM GY P T G +
Sbjct: 190 VMMPQNAAKNRAAMMRNLYGIYGYAAPNFTIGPL 223
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E + + LR+YF +FG + + + + T RGFGFVTF++ + V +R
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 160 -SHEICGQQVAIDSATP 175
+HE+ ++V A P
Sbjct: 82 GTHEVDKKKVDPKVAFP 98
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 89 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 131
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 132 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 191
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 192 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 231
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 81 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 126
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 127 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 169
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 170 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 229
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 230 DSKSQAPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 269
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVS 157
+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 48 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 107
Query: 158 RRSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 108 SRPHTLDGRNIDPKPCTP 125
>gi|16041059|dbj|BAB69767.1| Musashi1 [Homo sapiens]
Length = 180
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E + ++V
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 105
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 106 IHFHEINNKMVECKKAQPKEVMSPT 130
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D VE + + HE+ V +A PKE
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 125
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRR 159
KIFVG L E + +D++ +FS+FG I+DV +P + +GF F+TF E VA+ + +
Sbjct: 137 KIFVGGLSTELSDDDIKTFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVANELLKT 196
Query: 160 SHE-ICGQQVAIDSATP 175
S + I G++V + ATP
Sbjct: 197 SKQTISGKEVEVKKATP 213
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADR 155
+K+FVG L E T ++LR +FS FG I + V P RGF F+ FA+ D+
Sbjct: 56 RKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDK 112
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 64/222 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ ++ RG GFITF+ V+ ++ D H + G V + R PK
Sbjct: 47 KDRYTQKPRGFGFITFSDPAIVDRVIEDNHVIDGKQVEIKRTIPK--------------- 91
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
GA L D KKIFVG L ++ + +F
Sbjct: 92 ----------------GAAPLKDFKT-------------KKIFVGGLVSTLKDDEFKDFF 122
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH--EICGQQVAIDSATPL 176
S+FG++++ + + RGFGF+ F AE+ V + ++++ + ++ G QV I A P
Sbjct: 123 SKFGKVVEHEIIRDHSTNKSRGFGFIVFDAEKTVDELLAKKGNMIDLDGTQVEIKKAEPK 182
Query: 177 DDAGPSQNFM--------------MNAAETFGGYGGPMRTYG 204
+ P +F N++ ++GG P R+ G
Sbjct: 183 KPSNPPHSFDNKPRSRPHADGYDGFNSSYSYGGSLAPYRSPG 224
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
KIF+G L +E + + YF ++G I+D + K RGFGF+TF++ + DRV
Sbjct: 15 KIFIGGLSKETSLGTFKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRVIED 74
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNF 185
+H I G+QV I P A P ++F
Sbjct: 75 NHVIDGKQVEIKRTIP-KGAAPLKDF 99
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMV---DTHELGGSTVVVDRATPKED-------DFR 52
+D + RG GFI F + +V+ L+ + +L G+ V + +A PK+ D +
Sbjct: 135 RDHSTNKSRGFGFIVFDAEKTVDELLAKKGNMIDLDGTQVEIKKAEPKKPSNPPHSFDNK 194
Query: 53 PVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGES 96
P R GY +N + Y+ G+ Y PGSF R S
Sbjct: 195 PRSRPHADGYDGFN------SSYSYGGSLAPYRSPGSFGARPSS 232
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T E+ +YF R+G I D + K TG RGFGF+T+A+ V D+V +
Sbjct: 19 KIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQE 78
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
+H I +QV I P G SQ + F G
Sbjct: 79 NHIINDKQVEIKRTIP---KGASQTNDFKTKKIFVG 111
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 51/161 (31%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ + RG GFIT+A A V+ ++ + H + V + R PK
Sbjct: 49 IMKDRHTGRPRGFGFITYADASVVDQVIQENHIINDKQVEIKRTIPK------------- 95
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
G +++ KKIFVG +P + ++L+
Sbjct: 96 -------------------------------GASQTNDFKTKKIFVGGIPATVSEDELKI 124
Query: 121 YFSRFGRILD-----VYVPKRTGHRGFGFVTFAEEVVADRV 156
+FS+ G +++ + KR+ RGFGFV F + D +
Sbjct: 125 FFSKHGNVVEHEIIRDHTTKRS--RGFGFVVFDSDKAVDNL 163
>gi|301774739|ref|XP_002922789.1| PREDICTED: TAR DNA-binding protein 43-like [Ailuropoda melanoleuca]
Length = 302
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 190 SRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|221331233|ref|NP_001137961.1| RNA-binding protein 6, isoform D [Drosophila melanogaster]
gi|220902621|gb|ACL83316.1| RNA-binding protein 6, isoform D [Drosophila melanogaster]
Length = 162
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED++ YF +FG I D + K+T HRGFGFVTF E V D+V
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQ 183
HEI + V A P + P+
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMLPAN 91
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D V+ + + HE+ V +A PKE
Sbjct: 40 DKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 85
>gi|432092848|gb|ELK25214.1| RNA-binding protein Musashi like protein 1 [Myotis davidii]
Length = 419
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E + ++V
Sbjct: 74 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 133
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 134 IHFHEINNKMVECKKAQPKEVMSPT 158
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D VE + + HE+ V +A PKE
Sbjct: 108 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 153
>gi|16041061|dbj|BAB69768.1| Musashi1 [Homo sapiens]
Length = 181
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E + ++V
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 105
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 106 IHFHEINNKMVECKKAQPKEVMSPT 130
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D VE + + HE+ V +A PKE
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 125
>gi|47228815|emb|CAG07547.1| unnamed protein product [Tetraodon nigroviridis]
Length = 362
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR+YF ++G + DV++PK R F FVTFA+ VA +
Sbjct: 204 RKVFVGRCTEDMTADELRQYFMQYGEVTDVFIPK--PFRAFAFVTFADHQVAQALCGEDL 261
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 262 IIKGVSVHISNAEP 275
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F +
Sbjct: 118 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDLKTGNSKGFGFVRFTDYETQI 176
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGSL 210
+V + H I G+ D P A P + T +R Y YG +
Sbjct: 177 KVIAQRHLIDGRWC--DCKLPNSKACPDDRKVFVGRCTEDMTADELRQYFMQYGEV 230
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG GFIT++ V+ +M DTH + G V + R PK+
Sbjct: 56 KNKQTSQPRGFGFITYSDPAVVDKVMEDTHVINGKQVEIKRTIPKD-------------- 101
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Y + KKIFVG LP T +D + +F
Sbjct: 102 ----------------------------YMKSNPKDFRTKKIFVGGLPPILTEDDFKDFF 133
Query: 123 SRFGRILDVYVPKRTG---HRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATP 175
++G +++ + + RGFGFV F +EEVV D ++ + ++ G +V I A P
Sbjct: 134 EKYGAVVEHQIMRDHQTRRSRGFGFVVFESEEVVDDLLANGNMIDLAGSKVEIKKAEP 191
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR---TGHRGFGFVTFAEEVVADRVSRR 159
KIFVG LP++ T +++F +G I+D + K + RGFGF+T+++ V D+V
Sbjct: 24 KIFVGGLPRDTTLATFQKHFGNYGVIVDSVIMKNKQTSQPRGFGFITYSDPAVVDKVMED 83
Query: 160 SHEICGQQVAIDSATPLD 177
+H I G+QV I P D
Sbjct: 84 THVINGKQVEIKRTIPKD 101
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTH--ELGGSTVVVDRATPKEDDFRPV 54
+D ++ RG GF+ F S + V++L+ + + +L GS V + +A PK+ P
Sbjct: 146 RDHQTRRSRGFGFVVFESEEVVDDLLANGNMIDLAGSKVEIKKAEPKKSSNLPT 199
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 159 RSHEICG 165
I
Sbjct: 116 ADEHIIN 122
>gi|390360718|ref|XP_780859.3| PREDICTED: TAR DNA-binding protein 43-like [Strongylocentrotus
purpuratus]
Length = 476
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 91 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEE 150
Y + Q +K+FVGRL + +D+ +YF++ G + DV++PK RGF FVT
Sbjct: 183 YPDSQVEQPEKRKLFVGRLSPDVKEDDIYQYFAKIGEVTDVFIPKE--FRGFAFVTLENA 240
Query: 151 VVADRVSRRSHEICGQQVAIDSATPLDDAG 180
+A + + H I G V I+ A P + G
Sbjct: 241 QIAQSLIGQDHIINGNSVLINYADPKNKQG 270
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 49/185 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 53 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 109 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 128
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F +F ++ D + K T HRGFGFVTF E + ++V HEI + V A P +
Sbjct: 129 FEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 188
Query: 178 DAGPS 182
P+
Sbjct: 189 VMSPT 193
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR YF +FG + + V P RGFGFVTF ++ D+V +
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 160 S-HEICGQQVAIDSATP 175
S HE+ + + A P
Sbjct: 81 SRHELDSKTIDPKVAFP 97
>gi|410919809|ref|XP_003973376.1| PREDICTED: TAR DNA-binding protein 43-like [Takifugu rubripes]
Length = 399
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ T +DLR++F ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKVFVGRCTEDMTTDDLRQFFMQYGEVTDVFIPK--PFRAFAFVTFADDQVAQSLCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGISVHISNAEP 263
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTG-HRGFGFVTFAEEVVADRVSRRS 160
+ V LP + T +DL+ YFS FG ++ V V + RTG +GFGFV FAE ++V +
Sbjct: 107 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKREGRTGSSKGFGFVRFAEYDAQEKVISQR 166
Query: 161 HEICGQQVAI---DSATPLDD 178
H I G+ +S PLD+
Sbjct: 167 HMIDGRWCDCKFPNSKQPLDE 187
>gi|221114449|ref|XP_002154409.1| PREDICTED: uncharacterized protein LOC100213955 [Hydra
magnipapillata]
Length = 397
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 48/175 (27%)
Query: 8 KAHRGIGFITFASADSVENLMVD-----THELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K RG GF+ F +A SV +++ + + EL + V RA PK + G
Sbjct: 53 KQSRGFGFVLFENASSVNDIIANKKAGASFELDDHQIEVKRALPK---------VPGGNA 103
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G G Y +K+FVG LP T +DLR +F
Sbjct: 104 GT--------------------SRTGGLY----------RKVFVGGLPSSITEDDLRSHF 133
Query: 123 SRFGRI--LDVYVPKRTGH-RGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
+FG + +D+ + T RGF FVTF +E AD+ + +R+ EIC + I A
Sbjct: 134 EKFGAVHEVDLLRDRDTNRLRGFAFVTFEDEDSADKCIQKRAQEICKKFCEIKRA 188
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 102 KKIFVGRLPQEATAED-LRRYFSRFGRILDVYVPKRTGH--RGFGFVTF-----AEEVVA 153
+K+F+G L + T ED LR++F +G+I+DV + + RGFGFV F +++A
Sbjct: 15 RKLFIGGLNKYHTDEDRLRKFFCEYGKIVDVTIMRDNDKQSRGFGFVLFENASSVNDIIA 74
Query: 154 DRVSRRSHEICGQQVAIDSATP 175
++ + S E+ Q+ + A P
Sbjct: 75 NKKAGASFELDDHQIEVKRALP 96
>gi|358340633|dbj|GAA48482.1| RNA-binding protein Musashi, partial [Clonorchis sinensis]
Length = 154
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVSR 158
KK+F+G + TAE+L +FS FG++ ++ + K T HRGFGFVTF EV A++V
Sbjct: 67 KKVFIGGVATGTTAEELETFFSEFGKVETCELMMDKSTNRHRGFGFVTFESEVAAEKVCN 126
Query: 159 -RSHEICGQQVAIDSATP 175
HE+ G+ V A P
Sbjct: 127 IHYHELNGKMVEAKKALP 144
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S + E + + HEL G V +A PKE
Sbjct: 101 DKSTNRHRGFGFVTFESEVAAEKVCNIHYHELNGKMVEAKKALPKE 146
>gi|432952700|ref|XP_004085203.1| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial
[Oryzias latipes]
Length = 260
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 20 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 79
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 80 IHFHEINNKMVECKKAQPKEVMSPT 104
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF + D VE + + HE+ V +A PKE
Sbjct: 54 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 99
>gi|170579059|ref|XP_001894657.1| RNA binding protein [Brugia malayi]
gi|158598628|gb|EDP36488.1| RNA binding protein, putative [Brugia malayi]
Length = 222
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KK+F+G L +T ED++ YF ++G++ D + K T HRGFGF+TF + V+D+V
Sbjct: 6 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYG-GP 199
HEI G+ V A P + P Q AA YG GP
Sbjct: 66 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARSLYGLGP 108
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ ++ HRG GFITF + D + + + HE+ G V +A PKE
Sbjct: 40 DKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKE 85
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 41/183 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPK---EDDFRPVGRMS 58
KD+ + RG GF+ F + V ++ H L G + TP+ + RP
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQ 102
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDL 118
G P S Y + KIFVG +P +L
Sbjct: 103 KG--------------------------PRSDYSKS-------NKIFVGGIPHNCGETEL 129
Query: 119 RRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSAT 174
R YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A
Sbjct: 130 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 189
Query: 175 PLD 177
P D
Sbjct: 190 PRD 192
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 159 RSHEICG 165
I
Sbjct: 116 ADEHIIN 122
>gi|348562530|ref|XP_003467063.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cavia
porcellus]
Length = 285
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 69/174 (39%), Gaps = 49/174 (28%)
Query: 9 AHRGIGFITFASADSVENLMVDTH-ELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNA 67
RG GF+TFA SV+ ++ H EL T+ A P+ + V R
Sbjct: 17 CRRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRT---------- 66
Query: 68 YISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGR 127
KKIFVG L ED+++YF +FG+
Sbjct: 67 ----------------------------------KKIFVGGLSANTVVEDVKQYFEQFGK 92
Query: 128 ILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
+ D + K T HRGFGFVTF E V ++V HEI + V A P +
Sbjct: 93 VEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 146
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 101 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 151
>gi|440909516|gb|ELR59416.1| RNA-binding protein Musashi-like protein 1, partial [Bos grunniens
mutus]
Length = 274
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E + ++V
Sbjct: 20 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 79
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 80 IHFHEINNKMVECKKAQPKEVMSPT 104
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D VE + + HE+ V +A PKE
Sbjct: 54 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 99
>gi|16041063|dbj|BAB69769.1| Musashi1 [Homo sapiens]
Length = 181
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E + ++V
Sbjct: 46 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 105
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 106 IHFHEINNKMVECKKAQPKEVMSPT 130
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S D VE + + HE+ V +A PKE
Sbjct: 80 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKE 125
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 88/222 (39%), Gaps = 49/222 (22%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 126 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 171
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 172 -----------------GMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELRE 214
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 215 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 274
Query: 177 D-------DAGPSQ---NFMMNAAETFGGYGGPMRTYGRMYG 208
D G SQ + NAA G G P T+ + YG
Sbjct: 275 DSKSQPPGQPGASQWGSRVVPNAAN--GWAGQPPPTWQQGYG 314
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVS 157
+K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 93 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 152
Query: 158 RRSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 153 SRPHTLDGRNIDPKPCTP 170
>gi|351713714|gb|EHB16633.1| TAR DNA-binding protein 43 [Heterocephalus glaber]
Length = 414
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++FS++G + DV++P R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFSQYGEVEDVFIP--IPFRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
K+F+G LP T DLR++F R+G++++V Y ++ RGFGF++F +E +R V+
Sbjct: 110 KVFLGGLPSNVTETDLRQFFMRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVERCVAD 169
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG 194
+ G+QV I A P D +G M ++ T+G
Sbjct: 170 HFVNLHGKQVEIKKAEPRDASGK----MNDSGNTWG 201
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEV-VADRVSR 158
K+FVG L E T E L+RYFSR+G ++D V K T RGFGFVTFA+ V +
Sbjct: 20 KLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQN 79
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQN 184
H + G+ + P + P +N
Sbjct: 80 GPHVLDGRTIDPKPCNPRTLSKPKRN 105
>gi|449447311|ref|XP_004141412.1| PREDICTED: uncharacterized protein LOC101211898 [Cucumis sativus]
Length = 238
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 95 ESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEV 151
+ Q G+KIFVG L E T E+ R YF FG+I DV V + RGFGFVTF
Sbjct: 9 NNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGFVTFESLE 68
Query: 152 VADRVSRRS-HEICGQQVAIDSATP 175
D V +R+ HE+ G++V + A P
Sbjct: 69 SVDSVLQRNFHELNGRRVEVKRAIP 93
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMV-DTHELGGSTVVVDRATPKEDDFRPV 54
D + RG GF+TF S +SV++++ + HEL G V V RA PK+ ++ V
Sbjct: 50 DSVTNRPRGFGFVTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGV 101
>gi|432864810|ref|XP_004070428.1| PREDICTED: TAR DNA-binding protein 43-like isoform 1 [Oryzias
latipes]
Length = 299
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+KIFVGR ++ T ++LR+YF ++G + DV++PK R F FVTFA++ VA
Sbjct: 191 SRKIFVGRCTEDMTPDELRQYFMQYGEVTDVFIPK--PFRAFAFVTFADDQVA------- 241
Query: 161 HEICGQQVAIDSATP-LDDAGPSQNFMMNAAETFGGY-GGPMRTYGRMYG 208
+CG+ + I + + +A P N N + F + GG +M+G
Sbjct: 242 QALCGEDLIIKGVSVHISNAEPKHN---NIHQLFRNFPGGIASLATQMFG 288
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV FA+
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFADYETQT 160
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 161 KVITQRHMIDGRWC--DCKLPNSKVCPDE 187
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + ED++ +FS+FG I+DV +P + +GF F+TF +E+VV + +
Sbjct: 135 KIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 159 RSHEICGQQVAIDSATP 175
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
+K+FVG L E T ++LR +F +G I + V P RGF F+ FA+ D++ S
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 158 RRSHEICGQQV 168
H I G++V
Sbjct: 114 ANDHIINGKKV 124
>gi|350596610|ref|XP_003361409.2| PREDICTED: TAR DNA-binding protein 43-like, partial [Sus scrofa]
Length = 259
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++L+++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 111 RKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGEDL 168
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 169 IIKGISVHISNAEP 182
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 21 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 79
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 80 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 106
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 44/178 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF SVE +M + H L T+ D +P
Sbjct: 45 QDPMTKRPRGFGFVTFTDQASVEEVMKNGPHTLDNKTI----------DPKP-------- 86
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A + + T GSF GR KK+FVG + T +D+R +
Sbjct: 87 --------------ATMKSATPPSQGGSFNGRV-------KKVFVGGIAAGTTEDDVRSF 125
Query: 122 FSRFGRI--LDVYVPKRTGH-RGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG + +D+ K T RGFGFV F E V DR+ + H+I G+ V + A P
Sbjct: 126 FGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQIHFHQINGKTVEVKKAEP 183
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
KIFVG L E T + L++YFS++G + D + P RGFGFVTF ++ + V +
Sbjct: 13 KIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKN 72
Query: 160 -SHEICGQQVAIDSATPLDDAGPSQNFMMN 188
H + + + AT PSQ N
Sbjct: 73 GPHTLDNKTIDPKPATMKSATPPSQGGSFN 102
>gi|334350508|ref|XP_003342364.1| PREDICTED: hypothetical protein LOC100617798 [Monodelphis
domestica]
Length = 675
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 79/173 (45%), Gaps = 47/173 (27%)
Query: 11 RGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
R GFITF+S + M + HE+ GS V + RA +ED +P GA+
Sbjct: 196 RCFGFITFSSLSEADAAMAASPHEVDGSRVELKRAVSREDSCKP---------GAH---- 242
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRI- 128
R+ KKIFVG + + + DL R+FS+FG +
Sbjct: 243 ----------------------------ARV-KKIFVGGIKGDVSESDLVRHFSQFGPVE 273
Query: 129 -LDVYVPKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLDD 178
++ V K++G RGFGFV F + AD+ + + H I G +V + A P +D
Sbjct: 274 KAEIIVNKQSGKKRGFGFVHFFDHDTADKAAVIKFHPIQGHRVEVKKALPKED 326
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVAD-RVSR 158
K+FVG L T LR YF FG + D V + R FGF+TF+ AD ++
Sbjct: 156 KLFVGGLSPYTTEIRLRSYFEAFGCLRDCVVVMNAQTNRSRCFGFITFSSLSEADAAMAA 215
Query: 159 RSHEICGQQVAIDSATPLDDA 179
HE+ G +V + A +D+
Sbjct: 216 SPHEVDGSRVELKRAVSREDS 236
>gi|328709829|ref|XP_001950969.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 349
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADR-VS 157
+K+F+G L T + L+ +F ++G I+DV V P+ RGFGF+T+++ + D+ +S
Sbjct: 10 RKLFIGGLNYTTTNDSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSSMVDQAMS 69
Query: 158 RRSHEICGQQVAIDSATPLDD 178
R H+I G++V A P DD
Sbjct: 70 NRPHKIDGREVETKRAVPRDD 90
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 48/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ + V+ M + H++ G V RA P++D +P
Sbjct: 43 KDPQTKRSRGFGFITYSQSSMVDQAMSNRPHKIDGREVETKRAVPRDDIDKPD------- 95
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
I+A KK+FV + +E + DL Y
Sbjct: 96 -------IAATV----------------------------KKMFVSGI-KEQSENDLLEY 119
Query: 122 FSRFGRILDVYV--PKRTGHR-GFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
F +FG I +V + K +G R GFGF+ + + D+ V +SH++ G ++ + A
Sbjct: 120 FGKFGNITNVTIVTDKDSGQRKGFGFIEYDDTDSVDKAVLIKSHQVAGGKLDVKKA 175
>gi|76156635|gb|AAX27802.2| SJCHGC01369 protein [Schistosoma japonicum]
Length = 386
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ VG L ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 186 QDVARKVHVGGLTEDISPETLRQHFSQYGRVSDVFIPK--PFRSFAFITFDDPEVAASLL 243
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMN 188
+ EI G +++I SA P QN N
Sbjct: 244 GKDQEIQGVRISIGSAVPKLPHTARQNINNN 274
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 159 RSHEICGQQ 167
I +
Sbjct: 116 ADEHIINSK 124
>gi|41393063|ref|NP_958884.1| TAR DNA-binding protein 43 [Danio rerio]
gi|29387090|gb|AAH49348.1| TAR DNA binding protein [Danio rerio]
Length = 412
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G + DV++PK R F FVTFA++ VA +
Sbjct: 197 RKVFVGRCTEDMTADELRQFFMQYGEVTDVFIPK--PFRAFAFVTFADDQVAAALCGEDL 254
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 255 IIKGVSVHISNAEP 268
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + + +DL+ YF FG ++ V V + +TG+ +GFGFV F +
Sbjct: 107 QKTSDLIVLG-LPWKTSEQDLKDYFGTFGEVIMVQVKRDVKTGNSKGFGFVRFGDWETQS 165
Query: 155 RVSRRSHEICGQ 166
+V + H I G+
Sbjct: 166 KVMTQRHMIDGR 177
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 159 RSHEICGQQ 167
I +
Sbjct: 116 ADEHIINSK 124
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + ED++ +FS+FG I+DV +P + +GF F+TF +E+VV + +
Sbjct: 135 KIFVGGLSTELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 194
Query: 159 RSHEICGQQVAIDSATP 175
I G++V + ATP
Sbjct: 195 PKQTINGKEVDVKKATP 211
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
+K+FVG L E T ++LR +F +G I + V P RGF F+ FA+ D++ S
Sbjct: 54 RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 113
Query: 158 RRSHEICGQQV 168
H I G++V
Sbjct: 114 ANDHIINGKKV 124
>gi|449268445|gb|EMC79309.1| TAR DNA-binding protein 43, partial [Columba livia]
Length = 340
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++L+++F+++G ++DV++PK R F FVTFA++ VA +
Sbjct: 191 RKVFVGRCTEDMTADELQQFFAQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F +
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|432864812|ref|XP_004070429.1| PREDICTED: TAR DNA-binding protein 43-like isoform 2 [Oryzias
latipes]
Length = 396
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+KIFVGR ++ T ++LR+YF ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKIFVGRCTEDMTPDELRQYFMQYGEVTDVFIPK--PFRAFAFVTFADDQVAQALCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGVSVHISNAEP 263
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV FA+
Sbjct: 102 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFADYETQT 160
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 161 KVITQRHMIDGRWC--DCKLPNSKVCPDE 187
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 159 RSHEICGQQ 167
I +
Sbjct: 116 ADEHIINSK 124
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 159 RSHEICGQQ 167
I +
Sbjct: 116 ADEHIINSK 124
>gi|281494221|gb|ADA71972.1| TDP-43 variant 2 [Mus musculus]
Length = 304
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 10/85 (11%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVA------- 240
Query: 161 HEICGQQVAIDSATP-LDDAGPSQN 184
+CG+ + I + + +A P N
Sbjct: 241 QSLCGEDLIIKGISMHISNAEPKHN 265
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H + G+ D P GP +
Sbjct: 160 KVMSQRHMVDGRWC--DCKLPNSKQGPDE 186
>gi|225447494|ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG L +E + +YF ++G I D V K +TG RGFGF+T+A+ V D V +
Sbjct: 19 KIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQE 78
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 79 THIINGKQVEIKRTIP 94
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 53/180 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ +TH + G V + R P+
Sbjct: 51 KDRQTGRPRGFGFITYADPSVVDEVIQETHIINGKQVEIKRTIPR--------------- 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G +S+ +KIFVG + + ++ + +F
Sbjct: 96 -----------------------------GSSQSNDFKTRKIFVGGILTSVSEDEFKNFF 126
Query: 123 SRFGRILD-----VYVPKRTGHRGFGFVTFAEEVVADRVSRRSH--EICGQQVAIDSATP 175
S++G++++ +V KR+ RGFGF+ F E V D + + ++ G QV I A P
Sbjct: 127 SKYGKVVEHEIIHDHVTKRS--RGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIKKAEP 184
>gi|328779378|ref|XP_003249642.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis mellifera]
Length = 212
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 49/160 (30%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITFA SV+ ++ H L G + ATPK
Sbjct: 94 KDPVTQRSRGFGFITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPK-------------- 139
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
R + + R KKIFVG + Q+ ++++++ Y
Sbjct: 140 ------------------------------NRAKQANRT-KKIFVGGVSQDTSSDEVKAY 168
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
F++FG++ + + + HRGFGFVTF E V DRV
Sbjct: 169 FNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 208
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+FVG L + ++E LR YF FG + DV + P RGFGF+TFAE D+V +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 160 S-HEICGQQVAIDSATPLDDA 179
H + G+++ ATP + A
Sbjct: 122 PIHTLDGKKIDPKHATPKNRA 142
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F D+VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 159 RSHEICGQQ 167
I +
Sbjct: 116 ADEHIINSK 124
>gi|241744067|ref|XP_002414227.1| tar DNA-binding protein, putative [Ixodes scapularis]
gi|215508081|gb|EEC17535.1| tar DNA-binding protein, putative [Ixodes scapularis]
Length = 204
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 94 GESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVA 153
G++S+ + +K+FVGR ++ T++DLR YFS+FG + DV++PK R F FVTF + VA
Sbjct: 72 GQASE-LSRKVFVGRCTEDLTSDDLRDYFSKFGEVTDVFIPK--PFRAFAFVTFVDPDVA 128
Query: 154 DRVSRRSHEICGQQV 168
+ H I G +
Sbjct: 129 QSLCGEDHIIRGTSI 143
>gi|145347002|ref|XP_001417969.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578197|gb|ABO96262.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV- 156
G KIFVG L + +R +FS+FG +++V V P RGFGF+TF + A +V
Sbjct: 12 GSKIFVGGLDRTVDEGVVRNFFSQFGPVMEVLVMRDPHNHQSRGFGFITFQRDDSAKQVL 71
Query: 157 SRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP 199
R H++ G++V + SA P A P Q +++ + GYG P
Sbjct: 72 QNRYHDMLGKRVEVKSAVPRGQAPPPQRGPPRSSQGY-GYGQP 113
>gi|34419189|dbj|BAC84953.1| RNA-binding protein Musashi-1 [Cynops pyrrhogaster]
Length = 169
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED+++YF +FG++ D + K T HRGFGFVTF E + ++V
Sbjct: 38 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 97
Query: 159 -RSHEICGQQVAIDSATPLDDAGPSQN 184
HEI + V A P + P+ +
Sbjct: 98 IHFHEINNKMVECKKAQPKEVMSPTSS 124
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF D VE + + HE+ V +A PKE
Sbjct: 72 DKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQPKE 117
>gi|296085054|emb|CBI28469.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG L +E + +YF ++G I D V K +TG RGFGF+T+A+ V D V +
Sbjct: 19 KIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQE 78
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 79 THIINGKQVEIKRTIP 94
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 53/180 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ +TH + G V + R P+
Sbjct: 51 KDRQTGRPRGFGFITYADPSVVDEVIQETHIINGKQVEIKRTIPR--------------- 95
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
G +S+ +KIFVG + + ++ + +F
Sbjct: 96 -----------------------------GSSQSNDFKTRKIFVGGILTSVSEDEFKNFF 126
Query: 123 SRFGRILD-----VYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEI--CGQQVAIDSATP 175
S++G++++ +V KR+ RGFGF+ F E V D + + I G QV I A P
Sbjct: 127 SKYGKVVEHEIIHDHVTKRS--RGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIKKAEP 184
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 45/180 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GF+TF ++E +++++ H L + A PK+
Sbjct: 50 KDPVTKRSRGFGFVTFIEYSTIEKILLNSPHFLDSKKIDPKIAIPKK------------- 96
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
P L D + ++++ +K+F+G L +DL +
Sbjct: 97 -------------------PDLVD-------KSINTEK-TRKVFIGGLSNNTVHKDLEAF 129
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATPLD 177
F ++G+I ++ + K T HRGFGFV F +E +A+ + R HEI + V A P D
Sbjct: 130 FGKYGKIESCELMMDKSTNRHRGFGFVMFEKEEIANHICNIRYHEINSKMVEAKKALPKD 189
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 90 FYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVT 146
F E KK+F+G L T E LR YF +G I DV + P RGFGFVT
Sbjct: 5 FEETEEKYHETNKKLFIGGLSPNTTLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVT 64
Query: 147 FAEEVVADRVSRRS-HEICGQQVAIDSATP 175
F E +++ S H + +++ A P
Sbjct: 65 FIEYSTIEKILLNSPHFLDSKKIDPKIAIP 94
>gi|257215902|emb|CAX83103.1| TAR DNA-binding protein 43 [Schistosoma japonicum]
Length = 357
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ VG L ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 191 QDVARKVHVGGLTEDISPETLRQHFSQYGRVSDVFIPK--PFRSFAFITFDDPEVAASLL 248
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMN 188
+ EI G +++I SA P QN N
Sbjct: 249 GKDQEIQGVRISIGSAVPKLPHTARQNINNN 279
>gi|358252904|dbj|GAA50476.1| TAR DNA-binding protein 43 [Clonorchis sinensis]
Length = 507
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +KI VG LP+ A+ LR++F ++G ++DV++PK R F FVTF + VA +
Sbjct: 235 QEVSRKIHVGNLPESIGADALRQHFLQYGLVIDVFIPKP--FRSFAFVTFDDPDVAASLL 292
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRT 202
+ I G +V I SA P + QN +F GG +R+
Sbjct: 293 GKDLTIQGHKVTIGSAVPKLPSHVRQN------PSFENAGGNLRS 331
>gi|197209735|dbj|BAG68909.1| RNA binding protein [Arabidopsis thaliana]
Length = 359
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 22/198 (11%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG GF+ FA+ V + DTH + G V V +A K + ++ M
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHEIYQQPFSMQ---- 94
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + G + + G +S+ KKIFVG L T E+ + YF
Sbjct: 95 -----FLERKMQQMNGGLREMSSN-------GVTSR--SKKIFVGGLSSNTTEEEFKSYF 140
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
RFGR DV V RGFGFVT+ +E+ V + HE+ ++V + A P +
Sbjct: 141 ERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEG 200
Query: 179 AGPSQNFMMNAAETFGGY 196
+ +N T+ +
Sbjct: 201 IQSNNGNAVNVPPTYSSF 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + +E + E L++YFSR+G +L+ V K TG RGFGFV FA + + R
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 160 SHEICGQQVAIDSA 173
+H I G+ V + A
Sbjct: 67 THFILGKPVDVRKA 80
>gi|257215904|emb|CAX83104.1| TAR DNA-binding protein 43 [Schistosoma japonicum]
Length = 357
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+ VG L ++ + E LR++FS++GR+ DV++PK R F F+TF + VA +
Sbjct: 191 QDVARKVHVGGLTEDISPETLRQHFSQYGRVSDVFIPK--PFRSFAFITFDDPEVAASLL 248
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMN 188
+ EI G +++I SA P QN N
Sbjct: 249 GKDQEIQGVRISIGSAVPKLPHTARQNINNN 279
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGFLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F ++VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Query: 159 -RSHEICGQQVAIDSA 173
H I ++V + A
Sbjct: 116 VEEHIINSKKVDLPKA 131
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 196
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 197 PKQKIAGKEVDVKRATP 213
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+FVG L E T ++LR +F ++G I + V P+ RGF F+ F ++VS
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA 115
Query: 159 -RSHEICGQQV 168
H I ++V
Sbjct: 116 VEEHIINSKKV 126
>gi|226484798|emb|CAX74308.1| TAR DNA-binding protein 43 [Schistosoma japonicum]
gi|226484800|emb|CAX74309.1| TAR DNA-binding protein 43 [Schistosoma japonicum]
Length = 344
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+FVG + + TA+ LR +FS+FGR++DV++PK R F FV+F + VA +
Sbjct: 189 QEVSRKVFVGGITEFITADLLRDHFSQFGRVIDVFIPK--PFRSFAFVSFEDPQVATDLL 246
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQN 184
+ I G ++I SA P P QN
Sbjct: 247 GKDQVIEGVTLSIGSAVP--KLPPQQN 271
>gi|90074958|dbj|BAE87159.1| unnamed protein product [Macaca fascicularis]
Length = 298
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPK--PFRAFAFVTFADDQIAQSLCGED 247
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 248 LIIKGISVHISNAEP 262
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 8/101 (7%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
+V + H I G+ D P ++ SQ+ + + + F G
Sbjct: 160 KVMSQRHMIDGRWC--DCKLP--NSKQSQDEPLRSRKVFVG 196
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 72 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR-------------- 117
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G + KIFVG +P +LR
Sbjct: 118 -----------------GMQPERTRPKEGWQKGPRNDNSKSNKIFVGGIPHNCGETELRE 160
Query: 121 YFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG + +V Y ++ RGFGF+TF +E D+ V+ H+I G++V + A P
Sbjct: 161 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPR 220
Query: 177 D 177
D
Sbjct: 221 D 221
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 40 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 99
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 100 RPHTLDGRNIDPKPCTP 116
>gi|302654951|ref|XP_003019271.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
gi|291182985|gb|EFE38626.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
Length = 496
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 58/183 (31%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGST-------VVVDRATPKEDDFRPVG 55
+D S RG GF+TF +V +MV H L + + RA P+++ R
Sbjct: 32 RDGASGRSRGFGFLTFTDPKTVNTVMVKEHYLDARSFADQLYKIDPKRAIPRDEQER--- 88
Query: 56 RMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATA 115
KIFVG + QEAT
Sbjct: 89 ---------------------------------------------TSKIFVGGVSQEATE 103
Query: 116 EDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSHEICGQQVAIDS 172
++ +++F +FGR++D + + K TG RGFGFVTF E + EI G+ + +
Sbjct: 104 QEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLEIHGKAIEVKK 163
Query: 173 ATP 175
A P
Sbjct: 164 AQP 166
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRVSRR 159
+F+G L E T + L+ YFS+FG + + V R G RGFGF+TF + + V +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTV-MRDGASGRSRGFGFLTFTDPKTVNTVMVK 59
Query: 160 SH 161
H
Sbjct: 60 EH 61
>gi|441641373|ref|XP_004090371.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Nomascus
leucogenys]
Length = 267
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L ED+++YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 49 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 108
Query: 159 -RSHEICGQQVAIDSATPLDDAGP 181
HEI + V A P + P
Sbjct: 109 IHFHEINNKMVECKKAQPKEVMFP 132
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 83 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 133
>gi|209154888|gb|ACI33676.1| TAR DNA-binding protein 43 [Salmo salar]
Length = 399
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+KIFVGR ++ T ++LR++F ++G + DV++PK R F FVTFA++ VA +
Sbjct: 192 RKIFVGRCTEDITTDELRQFFMQYGEVTDVFIPK--PFRAFAFVTFADDQVASALCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGVSVHISNAEP 263
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 96 SSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVV 152
S ++ I +G LP + + +DL+ YF+ FG ++ V V + +TG+ +GFGFV F E
Sbjct: 100 SIEKTSDLIILG-LPWKTSEQDLKDYFATFGEVIMVQVKRDVKTGNSKGFGFVRFTEYET 158
Query: 153 ADRVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P AGP +
Sbjct: 159 QSKVISQRHMIDGRWC--DCKLPNSKAGPDE 187
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ D H++ G V RA P++D RP
Sbjct: 52 KDPTTKRSRGFGFITYSRAHMVDDAQNDRPHKVDGRVVEPKRAVPRQDIGRP-------- 103
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GA KK+FVG L + EDLR
Sbjct: 104 ---------------EAGATV-------------------KKLFVGGLKDDVEEEDLREC 129
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSA 173
F +G IL + K TG RGFGF+ F + D++ R H+I G+ + + A
Sbjct: 130 FKSYGTILSCTIVTDKDTGKKRGFGFIEFEDYDPVDKICLYRHHQIHGKHIDVKKA 185
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T E L+++F ++G I+DV V P RGFGF+T++ +V D +
Sbjct: 19 RKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRAHMVDDAQN 78
Query: 158 RRSHEICGQQVAIDSATPLDDAG 180
R H++ G+ V A P D G
Sbjct: 79 DRPHKVDGRVVEPKRAVPRQDIG 101
>gi|194386398|dbj|BAG59763.1| unnamed protein product [Homo sapiens]
Length = 267
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L ED+++YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 49 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 108
Query: 159 -RSHEICGQQVAIDSATPLDDAGP 181
HEI + V A P + P
Sbjct: 109 IHFHEINNKMVECKKAQPKEVMFP 132
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 83 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 133
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSR 158
KKIFVG LP T E+ R+YF +G + DV Y RGFGFV+F E D V
Sbjct: 105 KKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLH 164
Query: 159 RS-HEICGQQVAIDSATPLD 177
++ H++ G+QV + A P D
Sbjct: 165 KTFHDLSGKQVEVKRALPKD 184
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
DQ + RG GF++F S D+V++++ T H+L G V V RA PK+
Sbjct: 139 DQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKD 184
>gi|47551207|ref|NP_999784.1| stage specific activator protein [Strongylocentrotus purpuratus]
gi|4071008|gb|AAC98546.1| stage specific activator protein [Strongylocentrotus purpuratus]
Length = 382
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 96 SSQRIG------KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRT---GHRGFGFVT 146
S +R+G KK+FVG + Q+AT EDL F G + DV++ T HRGFGFVT
Sbjct: 87 SEKRMGPGDQRTKKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVT 146
Query: 147 FAEEVVADRVSRRSH-EICGQQVAIDSATP 175
E +++ R H E+ G+ + I A P
Sbjct: 147 LDSEEAVEKLVRMHHLELKGKSMEIKKAQP 176
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV----PKRTGHRGFGFVTFAEEVVADRVS- 157
KIFVG + + A+ R YF +FG++ D+ + K ++GFGFVTFA+ D V+
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVTN 66
Query: 158 RRSHEICGQ 166
++H + G+
Sbjct: 67 EKNHNLEGK 75
>gi|313230121|emb|CBY07825.1| unnamed protein product [Oikopleura dioica]
Length = 422
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRV-S 157
+KIF+G LP EA E L+ +FSRFG I+D VPK +GFGFVTF D V +
Sbjct: 19 RKIFIGNLPYEADEEMLKNHFSRFGEIVDCVVPKDPKTKFAKGFGFVTFTRGTAVDEVMT 78
Query: 158 RRSHEICGQ 166
R H++ G+
Sbjct: 79 NRPHKVAGR 87
>gi|302780479|ref|XP_002972014.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
gi|302781554|ref|XP_002972551.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160018|gb|EFJ26637.1| hypothetical protein SELMODRAFT_172861 [Selaginella moellendorffii]
gi|300160313|gb|EFJ26931.1| hypothetical protein SELMODRAFT_172407 [Selaginella moellendorffii]
Length = 167
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG + E T E L+ YF +G +++ + K TG RGFGFV FA+ VADRV +
Sbjct: 7 KIFVGGVSWETTDEKLKEYFQSYGDVVEAMIMKDRTTGRGRGFGFVVFADPDVADRVVQD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFM 186
H I G+ V A P D+ ++ F+
Sbjct: 67 KHSINGKLVEAKKAVPRDEHQNAKIFV 93
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 53/179 (29%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ KD+ + RG GF+ FA D + ++ D H + G V +A P+++
Sbjct: 37 IMKDRTTGRGRGFGFVVFADPDVADRVVQDKHSINGKLVEAKKAVPRDE----------- 85
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
H + KIFVG L + E+ ++
Sbjct: 86 -------------------------HQNA-------------KIFVGGLAPNVSEEEFKQ 107
Query: 121 YFSRFGRILDVYVPKRTGH---RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATP 175
YF +FG I D+ V RGFGF+TF E D V +++ HE+ + V + A P
Sbjct: 108 YFEQFGNITDIVVMYDHATQRPRGFGFITFDSEEAVDSVLQKTFHELKDKMVEVKRAVP 166
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPK 47
D ++ RG GFITF S ++V++++ T HEL V V RA PK
Sbjct: 123 DHATQRPRGFGFITFDSEEAVDSVLQKTFHELKDKMVEVKRAVPK 167
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A SV+ ++ H + T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGF+TF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V +++ H + + + A P
Sbjct: 71 DAASVDKVLAQQKHSVLIKTIDPKVAFP 98
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GFITF S D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|313227708|emb|CBY22856.1| unnamed protein product [Oikopleura dioica]
Length = 442
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 93 RGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVV 152
+GE+ ++ +K+FVGRL + DL+ YFS+FG+I ++ +P+ R F F+TFA+
Sbjct: 201 KGETGNQL-RKVFVGRLTTDLNRHDLQEYFSQFGQITEITIPQ--PFRSFAFITFADSND 257
Query: 153 ADRVSRRSHEICGQQVAIDSATPLDD 178
A + + H I G V SA P+ D
Sbjct: 258 AIAILDQDHLIKGTSVVTRSADPIQD 283
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRIL--DVYVPKRTGH-RGFGFVTFAE-EVVADRVSRR 159
+ V +P + TAEDL+ YFSRFG+++ D+ V TG RGFGF+ F E +
Sbjct: 126 LAVLSIPWQTTAEDLKMYFSRFGKVVFSDIKVDAETGKSRGFGFIRFEHYESQLAAMECP 185
Query: 160 SHEICGQQVAI 170
HE+ G+Q+ +
Sbjct: 186 IHELDGRQIVL 196
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A SV+ ++ H + T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGF+TF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V +++ H + + + A P
Sbjct: 71 DAASVDKVLAQQKHSVLIKTIDPKVAFP 98
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GFITF S D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|225680657|gb|EEH18941.1| heterogeneous nuclear ribonucleoprotein A/B [Paracoccidioides
brasiliensis Pb03]
gi|226292332|gb|EEH47752.1| heterogeneous nuclear ribonucleoprotein A1 [Paracoccidioides
brasiliensis Pb18]
Length = 493
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG + QEAT +D +++F +FGR++D + + K +G RGFGFVTF E +
Sbjct: 44 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSG 103
Query: 160 SHEICGQQVAIDSATP 175
EI G+ + + A P
Sbjct: 104 PLEILGKPIEVKKAQP 119
>gi|116283521|gb|AAH29728.1| Tardbp protein [Mus musculus]
Length = 288
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 10/85 (11%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA
Sbjct: 190 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVA------- 240
Query: 161 HEICGQQVAIDSATPLDDAGPSQNF 185
+CG+ + I + + + PS N
Sbjct: 241 QSLCGEDLIIKGIS-VHNMKPSFNL 264
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF A SV+ ++ H + T+ A P+ + V R
Sbjct: 54 RDPTTKRSRGFGFVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L ED+++Y
Sbjct: 110 ----------------------------------------KKIFVGGLSANTVVEDVKQY 129
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F +FG++ D + K T HRGFGF+TF E + ++V HEI + V A P
Sbjct: 130 FEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQP 187
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G SQ K+F+G L + + + LR YFS+FG I + V P RGFGFVTF
Sbjct: 11 GSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFT 70
Query: 149 EEVVADRV-SRRSHEICGQQVAIDSATP 175
+ D+V +++ H + + + A P
Sbjct: 71 DAASVDKVLAQQKHSVLIKTIDPKVAFP 98
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GFITF S D VE + + HE+ V +A PKE F P
Sbjct: 144 DKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 194
>gi|313231345|emb|CBY08460.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVS 157
KKIFVG L DL YFS++G++ + + + HRGFGFVTF +E+ V + V
Sbjct: 14 KKIFVGGLSASTVQADLTAYFSKYGKVEEAMLMFDRQTNRHRGFGFVTFDSEDAVENVVE 73
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQ 183
HEI + V A P D P+Q
Sbjct: 74 IHYHEINNKTVECKKAQPKDVMMPNQ 99
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP---VGRMSH 59
D+ + HRG GF+TF S D+VEN++ + HE+ TV +A PK D P RM
Sbjct: 48 DRQTNRHRGFGFVTFDSEDAVENVVEIHYHEINNKTVECKKAQPK-DVMMPNQSQKRM-- 104
Query: 60 GGYGAYNAYISAATRYAALGAPTLYDHP 87
A A++ ++ A G P +Y +P
Sbjct: 105 ----ANQAFLVQGSQPAHFGLPGVYLNP 128
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|317419098|emb|CBN81136.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 369
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L T ED++ YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 115 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 174
Query: 159 -RSHEICGQQVAIDSATPLDDAGPS 182
HEI + V A P + P+
Sbjct: 175 IHFHEINNKMVECKKAQPKEVMTPT 199
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF + D VE + + HE+ V +A PKE
Sbjct: 149 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE 194
>gi|428671713|gb|EKX72628.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 399
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 70/241 (29%)
Query: 1 MPKDQG-SKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE---------- 48
P+ Q S ++G GFI+F + ++++ + H + G V+VDRAT ++
Sbjct: 153 CPRQQNNSNLNKGFGFISFDNEEAIQKVFETVPHIIMGREVIVDRATGQKYHSGAGGVNR 212
Query: 49 ----------DDFRPVGRMS--HGGYG----------------------AYNAYISAATR 74
D +R GR + GY YN I +
Sbjct: 213 RPSGQPLYQRDSYRDPGRYKRHYDGYSDRPDKFPRRDRVDRPFPYQDREPYNPSIPPYRQ 272
Query: 75 YAAL---GAPTLYDHPGSFYGRGESS--------------QRIGKKIFVGRLPQEATAED 117
AA P Y GS R ESS +R K+F+GR+ + T +
Sbjct: 273 NAATFDPNKPVSYVFSGS--ARNESSGDQYAPGTSARPQRERTTPKLFIGRISFDTTVQG 330
Query: 118 LRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAEE--VVADRVSRRSHEICGQQVAIDS 172
LR YFS+FG ++D Y+P+ + + +GFGF+TFA + + A H + G+++ +D
Sbjct: 331 LRAYFSQFGEVVDAYIPRDSYNQRSKGFGFLTFANKSSIHAVLEPNTKHVLDGRELVVDY 390
Query: 173 A 173
A
Sbjct: 391 A 391
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTF-AEEVVADRVS 157
+IF+ R+ EAT +DL YFS+FG + D Y P++ ++GFGF++F EE +
Sbjct: 123 RIFITRIAFEATEDDLEEYFSKFGTVHDAYCPRQQNNSNLNKGFGFISFDNEEAIQKVFE 182
Query: 158 RRSHEICGQQVAIDSAT 174
H I G++V +D AT
Sbjct: 183 TVPHIIMGREVIVDRAT 199
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 55/191 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D + RG GF+TF SV+ ++ H L G + RA P+E+
Sbjct: 186 RDNATGRSRGFGFLTFTKTASVDEVLKKQHVLDGKLIDPKRAIPREE------------- 232
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + E T ED YF
Sbjct: 233 -----------------------------------QDKTGKIFVGGIAAEVTEEDFTDYF 257
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLDD 178
S+FG I+D + + K TG RGFGFVT+ DRV + + G+ + I A P +
Sbjct: 258 SQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDRVCANKYVPLKGRSMEIKRAEPRNQ 317
Query: 179 AGPSQNFMMNA 189
QN NA
Sbjct: 318 ---QQNQRTNA 325
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T E LR YF +FG I D+ + + RGFGF+TF + D V ++
Sbjct: 154 KMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEVLKK 213
Query: 160 SHEICGQQVAIDSATP 175
H + G+ + A P
Sbjct: 214 QHVLDGKLIDPKRAIP 229
>gi|62897067|dbj|BAD96474.1| TAR DNA binding protein variant [Homo sapiens]
Length = 414
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR + T ++LR +FS++G ++DV++PK R F FVTFA++ +A +
Sbjct: 191 RKVFVGRCTGDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDL 248
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 249 IIKGISVHISNAEP 262
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICG 165
+V + H I G
Sbjct: 160 KVMSQRHMIDG 170
>gi|66358802|ref|XP_626579.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228014|gb|EAK88934.1| RRM domain containing protein [Cryptosporidium parvum Iowa II]
Length = 199
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 94 GESSQRI---GKKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTF 147
GE+SQ +KIFVG LP + + LR+YF +FG+I D + K++G RGFGFVTF
Sbjct: 74 GENSQGTMFRTEKIFVGNLPTTCSQDILRKYFEQFGQISDCVMMCDKKSGIGRGFGFVTF 133
Query: 148 AEEVVADRVSRR--SHEICGQQVAIDSATP 175
V D + R H I GQ V + A+P
Sbjct: 134 TSTSVVDEIIRAYDEHYIDGQWVEVKRASP 163
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM--VDTHELGGSTVVVDRATPKEDDFRPVGRMS 58
M D+ S RG GF+TF S V+ ++ D H + G V V RA+P E+ R G MS
Sbjct: 116 MMCDKKSGIGRGFGFVTFTSTSVVDEIIRAYDEHYIDGQWVEVKRASP-ENALRG-GNMS 173
Query: 59 HGGYGAYNA 67
G + NA
Sbjct: 174 CNGISSLNA 182
>gi|357447963|ref|XP_003594257.1| RNA-binding protein, putative [Medicago truncatula]
gi|355483305|gb|AES64508.1| RNA-binding protein, putative [Medicago truncatula]
Length = 411
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTF-AEEVVADRVS 157
KKIFVG L T D + YF +FG I DV V RGFGF+T+ +EE V +
Sbjct: 36 KKIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLH 95
Query: 158 RRSHEICGQQVAIDSATPLD 177
+ HE+ G+ V + A P D
Sbjct: 96 KTFHELNGKMVEVKRAVPKD 115
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
D ++ RG GFIT+ S ++VE ++ T HEL G V V RA PK+
Sbjct: 70 DHNTQRPRGFGFITYDSEEAVEKVLHKTFHELNGKMVEVKRAVPKD 115
>gi|215712317|dbj|BAG94444.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 436
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH----RGFGFVTFAEEVVADRVSR 158
KIFVG LP++ T D ++F ++G I+D + R H RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVI-MRDKHTSQPRGFGFITYSNPAVVDRVMD 82
Query: 159 RSHEICGQQVAIDSATPLD 177
HE G+QV I P D
Sbjct: 83 DIHEFNGKQVEIKRTIPKD 101
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 51/157 (32%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFIT+++ V+ +M D HE G V + R PK+
Sbjct: 56 RDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDS------------- 102
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+S KKIFVG LPQ T +D + +F
Sbjct: 103 -------------------------------VQSKDFKTKKIFVGGLPQALTEDDFKHFF 131
Query: 123 SRFGRILDVYV-----PKRTGHRGFGFVTFAEEVVAD 154
++G ++D + KR+ RGFGF+ F+ + V D
Sbjct: 132 QKYGPVVDHQIMRDHQTKRS--RGFGFIVFSSDQVVD 166
>gi|171451950|dbj|BAG15903.1| musashi [Dugesia japonica]
Length = 473
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIF+G + +T E++R+YF+R+G + ++ + K T HRGFGFVTF +E VA+++ +
Sbjct: 134 KKIFIGGIATSSTVEEIRQYFNRYGEVENCELMMDKATNRHRGFGFVTFLDEDVAEQICQ 193
Query: 159 -RSHEICGQQVAIDSATP 175
H I + V A P
Sbjct: 194 IHYHNINNKMVEAKKALP 211
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH---RGFGFVTFAE-EVVADRVSR 158
K+FVG L T+E L+ YFS+FG I + V + H RGFGFVTF + V + +
Sbjct: 44 KLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTDYNGVIKVLKQ 103
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQ 183
+H + +++ A P P +
Sbjct: 104 ENHILDSKKIDPKLAVPKSICQPEK 128
>gi|2582639|emb|CAA05398.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 452
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
KKIFVG LP T + + YF +FG I DV V RGFGF+TF E D V
Sbjct: 49 KKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLH 108
Query: 159 RS-HEICGQQVAIDSATP--LDDAGPSQNFMMNAAETFG 194
++ HE+ G+ V + A P L P+++ ++ +G
Sbjct: 109 KTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGYGNNYG 147
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
D ++ RG GFITF S +SV+ ++ T HEL G V V RA PKE R GY
Sbjct: 83 DHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEVKRAVPKELSSTTPNRSPLIGY 142
Query: 63 GAYNAYISAATRYAA 77
G N Y R +A
Sbjct: 143 G--NNYGVVPNRSSA 155
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 50/193 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D ++ RG GF+TF+ VE ++ THE+ V A PK +PV +
Sbjct: 54 RDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + T L+++
Sbjct: 110 ----------------------------------------KKIFVGGIAASTTEPHLKKF 129
Query: 122 FSRFGRILDVYVP-KRTG--HRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
F ++G++ +V + RT HRGFGFV F E D V HE+ G+ V + A P +
Sbjct: 130 FEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPKE 189
Query: 178 DAGPSQNFMMNAA 190
P QN N A
Sbjct: 190 VMMP-QNAAKNRA 201
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E + + LR+YF +FG + + + + T RGFGFVTF++ + V +R
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 160 -SHEICGQQVAIDSATP 175
+HE+ ++V A P
Sbjct: 82 GTHEVDKKKVDPKVAFP 98
>gi|440913641|gb|ELR63062.1| RNA-binding protein Musashi-like protein 2, partial [Bos grunniens
mutus]
Length = 225
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L ED+++YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 7 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 66
Query: 159 -RSHEICGQQVAIDSATPLD 177
HEI + V A P +
Sbjct: 67 IHFHEINNKMVECKKAQPKE 86
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 41 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 91
>gi|148682885|gb|EDL14832.1| mCG16669, isoform CRA_c [Mus musculus]
Length = 289
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%), Gaps = 9/70 (12%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ TAE+L+++F ++G ++DV++PK R F FVTFA++ VA
Sbjct: 192 SRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPK--PFRAFAFVTFADDKVA------- 242
Query: 161 HEICGQQVAI 170
+CG+ + I
Sbjct: 243 QSLCGEDLII 252
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 103 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQV 161
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 162 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 188
>gi|148683903|gb|EDL15850.1| Musashi homolog 2 (Drosophila), isoform CRA_e [Mus musculus]
gi|149053820|gb|EDM05637.1| similar to RNA-binding protein Musashi2-S (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 224
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L ED+++YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 6 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLD 177
HEI + V A P +
Sbjct: 66 IHFHEINNKMVECKKAQPKE 85
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 40 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 90
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+TF+S D V+ M H + G V RA +E+ +P
Sbjct: 42 RDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAREESAKP-------- 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+++ KK+FVG + ++ LR Y
Sbjct: 94 ----GAHVTV------------------------------KKLFVGGIKEDTEEHHLREY 119
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +G+I +++ K++G RGFGFVTF + D+ V ++ H I G + A
Sbjct: 120 FEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Query: 178 DAGPSQNFMMNAAETFG 194
+ QN + FG
Sbjct: 180 EMQDVQNTRNSRGGNFG 196
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA--EEVVADRV 156
+K+F+G L E T + LR Y+ ++G++ D V P RGFGFVTF+ +EV A +
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDAS-M 67
Query: 157 SRRSHEICGQQVAIDSATPLDDA 179
+ R H I G+ V A +++
Sbjct: 68 AARPHTIDGRVVEPKRAVAREES 90
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+TF+S D V+ M H + G V RA +E+ +P
Sbjct: 42 RDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAREESAKP-------- 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+++ KK+FVG + ++ LR Y
Sbjct: 94 ----GAHVTV------------------------------KKLFVGGIKEDTEEHHLREY 119
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +G+I +++ K++G RGFGFVTF + D+ V ++ H I G + A
Sbjct: 120 FEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Query: 178 DAGPSQNFMMNAAETFG 194
+ QN + FG
Sbjct: 180 EMQDVQNTRNSRGGNFG 196
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA--EEVVADRV 156
+K+F+G L E T + LR Y+ ++G++ D V P RGFGFVTF+ +EV A +
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDAS-M 67
Query: 157 SRRSHEICGQQVAIDSATPLDDA 179
+ R H I G+ V A +++
Sbjct: 68 AARPHTIDGRVVEPKRAVAREES 90
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+TF+S D V+ M H + G V RA +E+ +P
Sbjct: 42 RDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAREESAKP-------- 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+++ KK+FVG + ++ LR Y
Sbjct: 94 ----GAHVTV------------------------------KKLFVGGIKEDTEEHHLREY 119
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +G+I +++ K++G RGFGFVTF + D+ V ++ H I G + A
Sbjct: 120 FEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Query: 178 DAGPSQNFMMNAAETFG 194
+ QN + FG
Sbjct: 180 EMQDVQNTRNSRGGNFG 196
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA--EEVVADRV 156
+K+F+G L E T + LR Y+ ++G++ D V P RGFGFVTF+ +EV A +
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDAS-M 67
Query: 157 SRRSHEICGQQVAIDSATPLDDA 179
+ R H I G+ V A +++
Sbjct: 68 AARPHTIDGRVVEPKRAVAREES 90
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 49/178 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GFIT+A V+ ++ + H + G V + R P+
Sbjct: 75 KDRKTGQPRGFGFITYADPSVVDKVIEEPHVINGKQVEIKRTIPR--------------- 119
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
A+G+ KKIFVG +P T ++ R +F
Sbjct: 120 -------------GAVGSKDFRT----------------KKIFVGGIPSNVTEDEFRDFF 150
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSH-EICGQQVAIDSATP 175
+R+G + D + + RGFGF+TF +EE V D +S + + G QV I A P
Sbjct: 151 TRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLSMGNKIDFAGAQVEIKKAEP 208
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T ++F ++G I D + K +TG RGFGF+T+A+ V D+V
Sbjct: 43 KIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDKVIEE 102
Query: 160 SHEICGQQVAIDSATP 175
H I G+QV I P
Sbjct: 103 PHVINGKQVEIKRTIP 118
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+TF+S D V+ M H + G V RA +E+ +P
Sbjct: 42 RDPASKRSRGFGFVTFSSMDEVDASMAARPHTIDGRVVEPKRAVAREESAKP-------- 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+++ KK+FVG + ++ LR Y
Sbjct: 94 ----GAHVTV------------------------------KKLFVGGIKEDTEEHHLREY 119
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +G+I +++ K++G RGFGFVTF + D+ V ++ H I G + A
Sbjct: 120 FEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Query: 178 DAGPSQNFMMNAAETFG 194
+ QN + FG
Sbjct: 180 EMQDVQNTRNSRGGNFG 196
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA--EEVVADRV 156
+K+F+G L E T + LR Y+ ++G++ D V P RGFGFVTF+ +EV A +
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDAS-M 67
Query: 157 SRRSHEICGQQVAIDSATPLDDA 179
+ R H I G+ V A +++
Sbjct: 68 AARPHTIDGRVVEPKRAVAREES 90
>gi|76154551|gb|AAX26015.2| SJCHGC08328 protein [Schistosoma japonicum]
Length = 167
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVS 157
Q + +K+FVG + + TA+ LR +FS+FGR++DV++PK R F FV+F + VA +
Sbjct: 85 QEVSRKVFVGGITEFITADLLRDHFSQFGRVIDVFIPK--PFRSFAFVSFEDPQVATDLL 142
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQN 184
+ I G ++I SA P P QN
Sbjct: 143 GKDQVIEGVTLSIGSAVP--KLPPQQN 167
>gi|326435665|gb|EGD81235.1| RNA-binding protein Musashi-1 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 99 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADR 155
R +K+FVG LP AT E L +FS FG I + V K+T RGFGFVTF E VA+
Sbjct: 523 RSARKVFVGGLPSNATDEALIGFFSNFGEIEEAVVIHDKQTRLPRGFGFVTFVSEQVAEH 582
Query: 156 -VSRRSHEICGQQVAIDSATPLDDAG---PSQNF 185
VS H++ G+ V + A P G PS+N+
Sbjct: 583 VVSLHYHDLLGKMVEVKRAEPKATDGNRSPSRNY 616
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVAD 154
Q I K+FVG L E + L+ YFSRFG ++D V TG RGFGFVTF +
Sbjct: 422 QIIPGKMFVGGLSPETNRDRLKGYFSRFGEVVDCVVMTDATTGRTRGFGFVTFRDGRCCA 481
Query: 155 RVSR-RSHEICGQQVAIDSATP 175
+V R R H I G++V A P
Sbjct: 482 KVLRERPHIIDGREVDPKMAVP 503
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR 158
KKIFVG +P T + L+ +FS +G++++ + + TG RGFGFVTF E +RV
Sbjct: 125 KKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 184
Query: 159 --RSHEICGQQVAIDSATP 175
R H++ G+QV I A P
Sbjct: 185 EGRMHDLGGKQVEIKKAEP 203
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 11 RGIGFITFASADSVENLMVD--THELGGSTVVVDRATPKE---DDFRPVGRMSHGG 61
RG GF+TF S D+VE +M + H+LGG V + +A PK+ D GR S GG
Sbjct: 166 RGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRHSRGG 221
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 75/178 (42%), Gaps = 51/178 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD ++ RG GFITF A SV+ ++ V H L G + ATPK
Sbjct: 63 KDPVTQRSRGFGFITFQEAASVDKVLAVPVHTLDGKRIDPKHATPK-------------- 108
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+A A T KKIFVG + Q+ +A+++R Y
Sbjct: 109 ----SAPKPAKT----------------------------KKIFVGGVGQDTSADEVRAY 136
Query: 122 FSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
F++FG + D + + HRGFGFVTF E +RV H I ++V A P
Sbjct: 137 FAQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFHTIKNKKVECKRAQP 194
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + ++E LR YF+ FG + DV + P RGFGF+TF E D+V +
Sbjct: 31 KLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAASVDKVLAV 90
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQN 184
H + G+++ ATP P++
Sbjct: 91 PVHTLDGKRIDPKHATPKSAPKPAKT 116
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
M DQ +K HRG GF+TF S ++VE + + H + V RA PKE
Sbjct: 148 MLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFHTIKNKKVECKRAQPKE 196
>gi|226472210|emb|CAX77141.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S+ RG GF+T+ A SV+ + H + G V RA P+E+
Sbjct: 47 KDPRSQKSRGFGFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREE------------ 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
++ +AA+ KKIFVG L ++ T EDL Y
Sbjct: 95 --------TSPEVHAAV-----------------------KKIFVGALKKDVTNEDLSDY 123
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
FS+FG + D + + K T RGF FVTF + D+V R H I + + A
Sbjct: 124 FSQFGTVTDAQIVIAKETNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKA 179
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KK+F+G L + L+ Y+ ++G I+DV V P+ RGFGFVT+ + D +
Sbjct: 14 KKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDAAQN 73
Query: 158 RRSHEICGQQVAIDSATPLDDAGP 181
R H + G++V A P ++ P
Sbjct: 74 NRPHTVDGKEVDTKRAMPREETSP 97
>gi|452824817|gb|EME31817.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 345
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG L E + LR YF +G + D + K TGH RGFGFVTF ++ VAD V+
Sbjct: 32 KVFVGGLSWETGEDSLRAYFEGYGEVADCVIMRDKYTGHPRGFGFVTFQDDSVADLVASL 91
Query: 160 SHEICGQQVAIDSATP 175
SH + G+QV A P
Sbjct: 92 SHILDGRQVEAKKAVP 107
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 83/224 (37%), Gaps = 63/224 (28%)
Query: 11 RGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GF+TF DSV +L+ +H L G V +A PK A +
Sbjct: 72 RGFGFVTFQD-DSVADLVASLSHILDGRQVEAKKAVPK-------------------AEV 111
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
S K+FVG + + ED YF +FG +L
Sbjct: 112 STKNETTKTTK----------------------KLFVGGISSSCSDEDFLVYFQKFGAVL 149
Query: 130 DVYV--PKRTGH-RGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPL--------- 176
D ++ +TG RGFGF+TF D+V + H I G+ V + A P
Sbjct: 150 DAHIMYDHQTGKSRGFGFITFCSVEAVDKVFQTPRHVIKGKVVEVKVAEPKHQSVESRKV 209
Query: 177 --DDAGPSQNFMMNAAETFGGYGGPMR-----TYGRMYGSLDFD 213
++G N + E+F P + TYG S FD
Sbjct: 210 KESESGTGYNSAVGKPESFKPAKSPYQCSEACTYGPFVNSFVFD 253
>gi|261488364|emb|CBH19557.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
gi|261488394|emb|CBH19572.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 125
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG LP++ T D ++F ++G I+D + K T RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 160 SHEICGQQVAIDSATPLD 177
HE G+QV I P D
Sbjct: 84 IHEFNGKQVEIKRTIPKD 101
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKE 48
+D+ + RG GFIT+++ V+ +M D HE G V + R PK+
Sbjct: 56 RDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKD 101
>gi|261488392|emb|CBH19571.1| RNA recognition motif containing protein [Oryza sativa Indica
Group]
Length = 188
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG LP++ T D ++F ++G I+D + K T RGFGF+T++ V DRV
Sbjct: 24 KIFVGGLPRDTTEADFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVMDD 83
Query: 160 SHEICGQQVAIDSATPLD 177
HE G+QV I P D
Sbjct: 84 IHEFNGKQVEIKRTIPKD 101
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 51/157 (32%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GFIT+++ V+ +M D HE G V + R PK+
Sbjct: 56 RDKHTSQPRGFGFITYSNPAVVDRVMDDIHEFNGKQVEIKRTIPKDS------------- 102
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+S KKIFVG LPQ +D + +F
Sbjct: 103 -------------------------------VQSKDFKTKKIFVGGLPQAQAEDDFKHFF 131
Query: 123 SRFGRILDVYV-----PKRTGHRGFGFVTFAEEVVAD 154
++G ++D + KR+ RGFGF+ F+ + V D
Sbjct: 132 QKYGPVVDHQIMRDHQTKRS--RGFGFIVFSSDQVVD 166
>gi|156371062|ref|XP_001628585.1| predicted protein [Nematostella vectensis]
gi|156215565|gb|EDO36522.1| predicted protein [Nematostella vectensis]
Length = 190
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAE-----EVVAD 154
K+FVG L +E T E LR YF +G + DV V + RGFG+VTFA+ V+ D
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKD 74
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPS 182
+V +H I G++V + A P DD +
Sbjct: 75 KVENGAHRIDGKEVEVKRAIPRDDNSAT 102
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 57/187 (30%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVD-----THELGGSTVVVDRATPKEDDFRPVGRMS 58
D +K RG G++TFA N++ D H + G V V RA P++D
Sbjct: 48 DSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDD--------- 98
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDL 118
++AT S KKIFVG LP++AT ED+
Sbjct: 99 -----------NSAT-----------------------SHEKTKKIFVGGLPEDATKEDI 124
Query: 119 RRYFSRFGR----ILDVYVPK--RTGHRGFGFVTFAEEVVADRVS--RRSHEICGQQVAI 170
+ +D+ + K T HRGF FV E AD + ++ H + G+ V
Sbjct: 125 QEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVELNNEDQADELCCVKKIH-VKGKMVEA 183
Query: 171 DSATPLD 177
ATP D
Sbjct: 184 KKATPRD 190
>gi|432865306|ref|XP_004070518.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oryzias latipes]
Length = 329
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+T++S V+ M H++ G V RA +ED RP
Sbjct: 46 RDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRP-------- 97
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+I+ KKIFVG + ++ LR Y
Sbjct: 98 ----GAHITV------------------------------KKIFVGGIKEDTEESHLRDY 123
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
F +FG+I +D+ + TG RGF FVTF + DR V ++ H I + A
Sbjct: 124 FQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKA 179
>gi|31417000|gb|AAH17560.1| MSI2 protein [Homo sapiens]
gi|119614914|gb|EAW94508.1| musashi homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 151
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L ED+++YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 6 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 65
Query: 159 -RSHEICGQQVAIDSATPLDDAGP 181
HEI + V A P + P
Sbjct: 66 IHFHEINNKMVECKKAQPKEVMFP 89
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 40 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 90
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|183178950|gb|ACC43958.1| TAR-protein [Philodina roseola]
Length = 288
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+KIFV RLP T +DLR+YFS++G I DVY+PK R F FVTF + + R +
Sbjct: 190 ARKIFVARLPDNITPDDLRQYFSKYGAIKDVYIPKPA--RSFAFVTFHDSNIV-RQLFGT 246
Query: 161 HEICGQQVAIDSATP 175
H I G V + A P
Sbjct: 247 HIIHGCSVTVGPAEP 261
>gi|5650424|dbj|BAA82622.1| Musashi [Halocynthia roretzi]
Length = 335
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 44/185 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F+ SV ++ + H L + TPK
Sbjct: 42 KDKVTGFSRGFGFVKFSDQQSVSKVLKNGPHSLDNKKIDPKPCTPKG------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
I + AA+ +H S KIF+G + Q +T ED+++Y
Sbjct: 89 -------IQQEKKSAAM------EHTQSH------------KIFIGGIAQSSTTEDVKKY 123
Query: 122 FSR-FGRILD-VYVPKRTG--HRGFGFVTFA-EEVVADRVSRRSHEICGQQVAIDSATPL 176
F FG + + V+V + H+GFGFVTFA E+ V V HEI +Q+ ATP
Sbjct: 124 FEEGFGTVNEVVFVINKEDNRHKGFGFVTFANEQAVNKAVDMHFHEIGDKQIEAKRATPR 183
Query: 177 DDAGP 181
+ P
Sbjct: 184 EKMPP 188
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ + LR YF FG +++ V K TG RGFGFV F+++ +V +
Sbjct: 10 KIFIGGLARQTEDDGLRAYFESFGEVVESIVMKDKVTGFSRGFGFVKFSDQQSVSKVLKN 69
Query: 160 S-HEICGQQVAIDSATP 175
H + +++ TP
Sbjct: 70 GPHSLDNKKIDPKPCTP 86
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 50/193 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D ++ RG GF+TF+ VE ++ THE+ V A PK +PV +
Sbjct: 54 RDTTTRRSRGFGFVTFSDPAHVETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKT---- 109
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + T L+++
Sbjct: 110 ----------------------------------------KKIFVGGIAASTTEPHLKKF 129
Query: 122 FSRFGRILDVYVP-KRTG--HRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
F ++G++ +V + RT HRGFGFV F E D V HE+ G+ V + A P +
Sbjct: 130 FEKYGKVEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPKE 189
Query: 178 DAGPSQNFMMNAA 190
P QN N A
Sbjct: 190 VMMP-QNAAKNRA 201
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+FVG L E + + LR+YF +FG + + + + T RGFGFVTF++ + V +R
Sbjct: 22 KMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHVETVIQR 81
Query: 160 -SHEICGQQVAIDSATP 175
+HE+ ++V A P
Sbjct: 82 GTHEVDKKKVDPKVAFP 98
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 170 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 229
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 230 KKFHTISGSKCEIKVAQPKE 249
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 87 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 146
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 147 KEHRLDGRVI 156
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 45/176 (25%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T+A SV+ ++ + HEL + A P+ RP
Sbjct: 56 RDPITKRSRGFGFVTYADPGSVDKVLANGPHELDTKLIDPKLAFPR----RP-------- 103
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
AT+ + T KKIFVG L T ED+++Y
Sbjct: 104 ---------NATQQPKMVTRT-------------------KKIFVGGLSASTTLEDVKQY 135
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSA 173
FS+FG+I D + K T HRGF FVTF E V D+V HEI + V +
Sbjct: 136 FSQFGKIEDAMLMFDKATQRHRGFAFVTFECEDVVDKVCEIHFHEINNKMVECKKS 191
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G E Q GK +FVG L + T E LR YF+++G I + V P RGFGFVT+A
Sbjct: 14 GNDEGHQDPGK-MFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYA 72
Query: 149 EEVVADRV 156
+ D+V
Sbjct: 73 DPGSVDKV 80
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 36/175 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D ++ RG GFITF SV ++ +TH +V+D K D + G
Sbjct: 83 RDPSTRRSRGFGFITFKDPASVSKVL-ETH--AQEPIVLDD---KNIDPKIAVPPKRPGN 136
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+ +A ++ K+IFVG L ++T DL+ YF
Sbjct: 137 KVMSPPWTAPSQ--------------------------TKRIFVGGLSSDSTEMDLQEYF 170
Query: 123 SRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSA 173
FG I DV Y + HRGFGFVTF E A++V S + H+I G++V + A
Sbjct: 171 QEFGTIQDVQLMYDRNTSRHRGFGFVTFDSEKPAEKVCSIQYHDIRGKKVEVKVA 225
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV 156
KIFVG L + ++E L YF+RFG +L+ + P RGFGF+TF + +V
Sbjct: 51 KIFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSKV 107
>gi|326517876|dbj|BAK07190.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 11 RGIGFITFASADSVENLMVD----THELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYN 66
RG F+ FA + + + H G TV V RA RP+ Y
Sbjct: 47 RGFAFVEFADEEGAHAALQEKEKANHVFGDRTVDVKRART-----RPMR------YQNEQ 95
Query: 67 AYISAATRYAALGAP------TLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
+ + + + +P T S+ G G S KK+FVG L T E L+
Sbjct: 96 PFYQRPSHQSPMQSPIHNQWYTQSSSNNSYAGNGHRSND-AKKVFVGGLRGNITKEHLQS 154
Query: 121 YFSRFGRILDVYVPKRTG---HRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPL 176
YF +FG I DV V + G RGFGF+TF ++E ++ + + H++ G +V A P
Sbjct: 155 YFEKFGNITDVVVIREGGTQRSRGFGFITFDSDEAMSKVLESKYHDLNGTKVETKVAIPK 214
Query: 177 DDA 179
D +
Sbjct: 215 DHS 217
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEE 150
+K++VG LP A ++L+ +FSR+G +L V V + TG RGF FV FA+E
Sbjct: 6 RKLYVGGLPPSAQQDELKDHFSRYGDVLCVRVVRDWETGQGRGFAFVEFADE 57
>gi|389616410|gb|AFK91569.1| squid, partial [Drosophila madeirensis]
gi|389616412|gb|AFK91570.1| squid, partial [Drosophila subobscura]
gi|389616414|gb|AFK91571.1| squid, partial [Drosophila subobscura]
gi|389616416|gb|AFK91572.1| squid, partial [Drosophila subobscura]
gi|389616418|gb|AFK91573.1| squid, partial [Drosophila subobscura]
gi|389616420|gb|AFK91574.1| squid, partial [Drosophila subobscura]
gi|389616422|gb|AFK91575.1| squid, partial [Drosophila subobscura]
gi|389616424|gb|AFK91576.1| squid, partial [Drosophila subobscura]
gi|389616426|gb|AFK91577.1| squid, partial [Drosophila subobscura]
gi|389616428|gb|AFK91578.1| squid, partial [Drosophila subobscura]
gi|389616430|gb|AFK91579.1| squid, partial [Drosophila subobscura]
gi|389616432|gb|AFK91580.1| squid, partial [Drosophila subobscura]
gi|389616434|gb|AFK91581.1| squid, partial [Drosophila subobscura]
gi|389616436|gb|AFK91582.1| squid, partial [Drosophila subobscura]
gi|389616438|gb|AFK91583.1| squid, partial [Drosophila subobscura]
gi|389616440|gb|AFK91584.1| squid, partial [Drosophila subobscura]
gi|389616442|gb|AFK91585.1| squid, partial [Drosophila subobscura]
gi|389616444|gb|AFK91586.1| squid, partial [Drosophila subobscura]
gi|389616446|gb|AFK91587.1| squid, partial [Drosophila subobscura]
gi|389616448|gb|AFK91588.1| squid, partial [Drosophila subobscura]
gi|389616450|gb|AFK91589.1| squid, partial [Drosophila subobscura]
gi|389616452|gb|AFK91590.1| squid, partial [Drosophila subobscura]
gi|389616454|gb|AFK91591.1| squid, partial [Drosophila subobscura]
gi|389616456|gb|AFK91592.1| squid, partial [Drosophila subobscura]
gi|389616458|gb|AFK91593.1| squid, partial [Drosophila subobscura]
gi|389616460|gb|AFK91594.1| squid, partial [Drosophila subobscura]
gi|389616462|gb|AFK91595.1| squid, partial [Drosophila subobscura]
gi|389616464|gb|AFK91596.1| squid, partial [Drosophila subobscura]
gi|389616466|gb|AFK91597.1| squid, partial [Drosophila subobscura]
gi|389616468|gb|AFK91598.1| squid, partial [Drosophila subobscura]
gi|389616470|gb|AFK91599.1| squid, partial [Drosophila subobscura]
gi|389616472|gb|AFK91600.1| squid, partial [Drosophila subobscura]
gi|389616474|gb|AFK91601.1| squid, partial [Drosophila subobscura]
gi|389616476|gb|AFK91602.1| squid, partial [Drosophila subobscura]
Length = 161
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + E+++ YF +FG I++V +P +++ +GF F+TF +E+VV D +
Sbjct: 51 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 110
Query: 159 RSHEICGQQVAIDSATP 175
+I G++V + ATP
Sbjct: 111 PKQKISGKEVDVKRATP 127
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG LP T DL +FS +G++ +V Y ++ RGFGFV+F E+ V SR
Sbjct: 116 KIFVGGLPATVTETDLHAFFSEYGKVTEVLIMYDQEQRRSRGFGFVSFETEDAVNQLTSR 175
Query: 159 RSHEICGQQVAIDSATPLD 177
R EI G+QV A P +
Sbjct: 176 RYVEISGKQVECKRAEPKE 194
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD-VYVPKRTGH-RGFGFVTFAE-EVVADRVSRR 159
KIFVG L E T E L YFSRFG ++D V + TG RGFGFVTF + VA ++
Sbjct: 11 KIFVGGLSWETTQESLLNYFSRFGEVVDSVVMCNETGRSRGFGFVTFRDPSCVATVLAGG 70
Query: 160 SHEICGQQVAIDSATP 175
H++ G+ V S P
Sbjct: 71 PHQLDGRTVDPKSCNP 86
>gi|125527839|gb|EAY75953.1| hypothetical protein OsI_03870 [Oryza sativa Indica Group]
Length = 312
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 79/186 (42%), Gaps = 57/186 (30%)
Query: 2 PKDQGSKAHRGIGFITFASADSVENLMV---DTHELGGSTVVVDRATPKEDDFRPVGRMS 58
PK++ + A RG F+ F + D + D + + G+T+ V A PK
Sbjct: 61 PKNKQTGAARGFAFVQFVNPDDAAAAIAAGPDRNVIRGTTMDVKLAQPKP---------- 110
Query: 59 HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDL 118
+ G P L PG Q+ +KIFVG LP AT + L
Sbjct: 111 ------------------SAGGPQL--SPGD--------QK--RKIFVGGLPVSATEKKL 140
Query: 119 RRYFSRFGRI--------LDVYVPKRTGHRGFGFVTFA-EEVVADRVSRRSHEICGQQVA 169
+ YFS+FG + L+ +P RGFGF+ FA EE A + + H +CGQ V
Sbjct: 141 KEYFSKFGEVNHAIVVTDLNTKMP-----RGFGFIQFASEESTARALKKDRHFLCGQWVE 195
Query: 170 IDSATP 175
+ A P
Sbjct: 196 VSLAMP 201
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTG-HRGFGFVTFAE 149
K+FVG +P + +LR +FSRFG + V P K+TG RGF FV F
Sbjct: 30 KVFVGGVPLGTSESELRAHFSRFGTVAFVGAPKNKQTGAARGFAFVQFVN 79
>gi|118344010|ref|NP_001071830.1| Tardbp protein [Ciona intestinalis]
gi|70571316|dbj|BAE06721.1| Ci-Tardbp [Ciona intestinalis]
Length = 440
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRR 159
+ KIFVGR+ ++ T +++R+YF +FG + DVY+P R F FVTF + VA +
Sbjct: 221 VSSKIFVGRITEKMTKDEIRQYFEQFGDVDDVYIP--IPFRAFAFVTFRDSNVAANLIGE 278
Query: 160 SHEICGQQVAIDSATP 175
I G V I++A P
Sbjct: 279 DQVINGVSVYINTADP 294
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 97 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG--HRGFGFVTFAEEVVAD 154
+Q+ I +G LP + +DL+ YF+++G ++ V V + RG+GF+ F+ V +
Sbjct: 135 AQKCSDLIVLG-LPWKIAEDDLKEYFAKYGELVMVLVKRDENGKSRGYGFIRFSSYEVQE 193
Query: 155 RVSRRSHEI 163
V + H I
Sbjct: 194 LVLSQRHII 202
>gi|224613250|gb|ACN60204.1| TAR DNA-binding protein 43 [Salmo salar]
Length = 294
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ +A++LR++F ++G + DV++PK R F FV+FA++ VA +
Sbjct: 80 RKVFVGRCTEDISADELRQFFMQYGEVTDVFIPKP--FRAFAFVSFADDQVASSLCGEDL 137
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 138 IIKGVSVHISNAEP 151
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 110 PQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRSHEICGQ 166
P + + +DL+ YFS FG ++ V V + +TG+ +GFGFV F E D+V + H I G+
Sbjct: 1 PWKTSEQDLKDYFSTFGEVIMVQVKRDVKTGNSKGFGFVRFTEYETQDKVISQRHMIDGR 60
Query: 167 QVAIDSATPLDDAGPSQ 183
D P GP +
Sbjct: 61 WC--DCKLPNSKQGPDE 75
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 37/187 (19%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+
Sbjct: 82 KDKTTNQSRGFGFVKFKDPNCVGAVLASRPHTLDGRNIDPKPCTPR-------------- 127
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRG-ESSQRIGKKIFVGRLPQEATAEDLRR 120
G P + +G S KIFVG +P +LR
Sbjct: 128 -----------------GMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELRE 170
Query: 121 YFSRFG---RILDVYVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPL 176
YF +FG ++ +Y ++ RGFGF+TF ++ D+ V+ H+I G++V + A P
Sbjct: 171 YFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQAVNMHFHDIMGKKVEVKRAEPR 230
Query: 177 DDAGPSQ 183
D Q
Sbjct: 231 DSKSQPQ 237
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 97 SQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVV 152
+++ K+FVG L T E LR YFS++G ++D + K RGFGFV F + V
Sbjct: 44 CEKLCGKLFVGGLDWSTTQETLRSYFSQYGEVIDCVIMKDKTTNQSRGFGFVKFKDPNCV 103
Query: 153 ADRVSRRSHEICGQQVAIDSATP 175
++ R H + G+ + TP
Sbjct: 104 GAVLASRPHTLDGRNIDPKPCTP 126
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFITF SV+ + + H++ G V V RA P++ +P G+ +G+
Sbjct: 193 RGFGFITFEDQQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQPQGQPGTNQWGS-RIVP 251
Query: 70 SAATRYAALGAPT 82
+AA +A PT
Sbjct: 252 NAANGWAGQPPPT 264
>gi|297840659|ref|XP_002888211.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297334052|gb|EFH64470.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 359
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 76/192 (39%), Gaps = 52/192 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD+ + RG GF+ FA+ V + TH + G V V +A K +
Sbjct: 39 KDKVTGISRGFGFVRFANDYDVVKALSGTHFILGKPVDVRKAFRKHE------------- 85
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSF-YGRGESSQRIG--------------KKIFVG 107
LY HP S G+ Q G KKIFVG
Sbjct: 86 --------------------LYQHPFSMQVFEGKVQQTNGGLREMASNGNIHRTKKIFVG 125
Query: 108 RLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSHEI 163
L T E+ + YF RFGR +DV V RGFGFVT+ +E+ V + HE+
Sbjct: 126 GLSSNTTQEEFKSYFERFGRTIDVVVMHDGVTNKPRGFGFVTYDSEDSVEFVMQSNFHEL 185
Query: 164 CGQQVAIDSATP 175
++V + A P
Sbjct: 186 SDKRVEVKRAIP 197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TG-HRGFGFVTFAEEVVADRVSRR 159
K+FVG + +E + EDL++YFSR+G +L V K TG RGFGFV FA + +
Sbjct: 7 KLFVGGIGKETSEEDLKQYFSRYGLVLGAVVAKDKVTGISRGFGFVRFANDYDVVKALSG 66
Query: 160 SHEICGQQVAIDSA 173
+H I G+ V + A
Sbjct: 67 THFILGKPVDVRKA 80
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
RG GF+T+ S DSVE +M + HEL V V RA PKE
Sbjct: 161 RGFGFVTYDSEDSVEFVMQSNFHELSDKRVEVKRAIPKE 199
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ + ++ H++ G V RA P++D P
Sbjct: 2650 KDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSP-------- 2701
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
NA GA KK+FVG L + + +R Y
Sbjct: 2702 ----NA-----------GATV-------------------KKLFVGALKDDHDEQSIRDY 2727
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSATP 175
F FG I+D + + K TG RGF FV F + D+V ++ H++ G+ V + A P
Sbjct: 2728 FQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALP 2785
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+F+G L T E+L+ +F ++G I+DV V P+ RGFGF+T++ + D +
Sbjct: 2617 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 2676
Query: 159 -RSHEICGQQVAIDSATPLDD 178
R H+I G+ V A P D
Sbjct: 2677 SRPHKIDGRVVEPKRAVPRQD 2697
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATP 175
++ H I G + I A P
Sbjct: 214 KKFHTISGSKCEIKVAQP 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT+ A V++ M H++ G V RA +E+ P+ M
Sbjct: 46 KDPNTKKSRGFGFITYKRASMVDDAMRSRPHKIDGREVEPKRAVAREESGNPLAHM---- 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ KKIFVG + ++ + + LR Y
Sbjct: 102 --------------------------------------LVKKIFVGGIKEDTSEDHLRDY 123
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATP 175
FS++G I +DV K TG RGF FVTF + D+ V + H I + + A P
Sbjct: 124 FSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIVGLKYHTINDHKSEVKKAVP 181
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L E T + L+ +FS +G I+D V P RGFGF+T+ +V D +
Sbjct: 13 RKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDAMR 72
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP-----MRTYGRMYGSLD 211
R H+I G++V A +++G M+ GG +R Y YGS++
Sbjct: 73 SRPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYFSKYGSIE 131
>gi|449458854|ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 94/258 (36%), Gaps = 74/258 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F+ ++ ++ D H + G TV RA +E+ P R S+
Sbjct: 39 RDKITSRPRGFGFVVFSDPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPA-RASNSNG 97
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
R KKIFVG LP T E + YF
Sbjct: 98 RNSGGSGGGNMRT--------------------------KKIFVGGLPPTLTEEGFKEYF 131
Query: 123 SRFGRILDVYVPKRTGHR---GFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+G + DV V R GFGF++F E DRV ++ H++ G+QV + A P D
Sbjct: 132 EAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALP-KD 190
Query: 179 AGP----------------------------------SQNFMMNAAETFGGYGGPMRTYG 204
A P N M + + GG+
Sbjct: 191 ANPGAGGRTMSGGAGSGGYQGYGSSGGVNSNSYDNRMDSNRYMQSQGSSGGF-------- 242
Query: 205 RMYGSLDFDDWGYGMGSG 222
YGS +++ YG GS
Sbjct: 243 PPYGSSGYNNPAYGYGSS 260
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G + E + + L+ YFS +G ++ V + + RGFGFV F++ V DRV +
Sbjct: 7 KLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQD 66
Query: 160 SHEICGQQVAIDSA 173
H I G+ V A
Sbjct: 67 KHTIDGKTVEAKRA 80
>gi|90077042|dbj|BAE88201.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 9 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 68
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 69 KKFHTISGSKCEIKVAQPKE 88
>gi|348521586|ref|XP_003448307.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oreochromis niloticus]
Length = 332
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+T++S V+ M H++ G V RA +ED RP
Sbjct: 47 RDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRP-------- 98
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+I+ KKIFVG + ++ LR Y
Sbjct: 99 ----GAHITV------------------------------KKIFVGGIKEDTEESHLRDY 124
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
F +FG+I +D+ + TG RGF FVTF + DR V ++ H I + A
Sbjct: 125 FQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKA 180
>gi|355564741|gb|EHH21241.1| hypothetical protein EGK_04258 [Macaca mulatta]
Length = 324
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 75/183 (40%), Gaps = 52/183 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+TF V+ ++ + HEL T+ A P+ + V R
Sbjct: 34 RDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRT---- 89
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG L T ED+++Y
Sbjct: 90 ----------------------------------------KKIFVGGLSVNTTVEDVKQY 109
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSA---T 174
F +FG++ D + K T HRGFGFVTF E + ++V HEI + V D T
Sbjct: 110 FEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVRWDRVQWLT 169
Query: 175 PLD 177
P++
Sbjct: 170 PVE 172
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 113 ATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQV 168
A E LR YF +FG + + V P RGFGFVTF ++ D+V +S HE+ + +
Sbjct: 12 ALVEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTI 71
Query: 169 AIDSATP 175
A P
Sbjct: 72 DPKVAFP 78
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ H++ G V RA P+++
Sbjct: 50 KDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQE------------ 97
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GR E+ + KK+FVG L + EDLR+Y
Sbjct: 98 -----------------------------IGRPEAGATV-KKLFVGGLKDDHEEEDLRQY 127
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
F +G I + + K TG RGFGFV F + D++ +R+H+I G+ V + A
Sbjct: 128 FQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T + L+++F ++G I+DV V PK RGFGF+T++ +V D +
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 211
R H++ G+ V A P + G + GG +R Y + YGS++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 135
>gi|326931600|ref|XP_003211915.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Meleagris
gallopavo]
Length = 261
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KKIFVG L ED+++YF +FG++ D + K T HRGFGFVTF E V ++V
Sbjct: 43 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 102
Query: 159 -RSHEICGQQVAIDSATPLD 177
HEI + V A P +
Sbjct: 103 IHFHEINNKMVECKKAQPKE 122
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRP 53
D+ + HRG GF+TF + D VE + + HE+ V +A PKE F P
Sbjct: 77 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPP 127
>gi|395841109|ref|XP_003793391.1| PREDICTED: TAR DNA-binding protein 43 [Otolemur garnettii]
Length = 244
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ T ++LR++F ++G ++DV++PK R F FVTFA++ VA +
Sbjct: 139 SRKVFVGRCTEDMTDDELRQFFCQYGEVVDVFIPK--PFRAFAFVTFADDQVAQSLCGED 196
Query: 161 HEICGQQVAIDSATP 175
I G V I +A P
Sbjct: 197 LIIKGVSVHISNAEP 211
>gi|209154032|gb|ACI33248.1| TAR DNA-binding protein 43 [Salmo salar]
Length = 405
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ +A++LR++F ++G + DV++PK R F FV+FA++ VA +
Sbjct: 192 RKVFVGRCTEDLSADELRQFFMQYGEVTDVFIPKP--FRAFAFVSFADDQVASSLCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGVSVHISNAEP 263
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+ V LP + T +DL+ YFS FG ++ V V + +TG+ +GFGFV F E D+V +
Sbjct: 107 LIVLGLPWKTTEQDLKDYFSTFGEVIMVQVKRDVKTGNSKGFGFVRFTEYETQDKVISQR 166
Query: 161 HEICGQQVAIDSATPLDDAGPSQ 183
H I G+ D P GP +
Sbjct: 167 HMIDGRWC--DCKLPNSKQGPDE 187
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 148 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLE 207
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 208 KKFHTISGSKCEIKVAQPKE 227
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D VP +GFGF+ F + ++V +
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKDAASVEKVLDQ 124
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 125 KEHRLDGRVI 134
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 158 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 217
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 218 KKFHTVSGSKCEIKVAQPKE 237
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 75 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 134
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 135 KEHRLDGRVI 144
>gi|85000983|ref|XP_955210.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303356|emb|CAI75734.1| RNA-binding protein, putative [Theileria annulata]
Length = 406
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGH----RGFGFVTFAEEVVADRV 156
+IF+ R+ EAT +DL YF +FG + D Y PK+ + +GFGF++F E +V
Sbjct: 111 ANRIFITRIAFEATKDDLEDYFKKFGTVYDAYCPKQNNYSGLNKGFGFISFENEESIKKV 170
Query: 157 SRR-SHEICGQQVAIDSAT 174
H I G++V +D AT
Sbjct: 171 FETGPHVIMGREVIVDRAT 189
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 99 RIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK-RTGH------------RGFGFV 145
R K+FVGR+ E + LR YFS+FG ++DVY+PK R+ + +GFGF+
Sbjct: 310 RNAPKLFVGRIGFETSVHSLRSYFSQFGDVIDVYIPKGRSTNSYITPDAQTQKGKGFGFL 369
Query: 146 TFAEEVVADRV--SRRSHEICGQQVAIDSA 173
TFA + V H I G+++ +D A
Sbjct: 370 TFANKSSIHTVLDPNLKHVIDGREIIVDYA 399
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ H + G V RA P+++
Sbjct: 43 KDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQE------------ 90
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GR E+ + KK+FVG L + EDLR+Y
Sbjct: 91 -----------------------------IGRPEAGATV-KKLFVGGLKDDHEEEDLRQY 120
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
F +G I + + K TG RGFGFV F + D++ +R+H+I G+ V + A
Sbjct: 121 FQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 176
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T + L+++F ++G I+DV V PK RGFGF+T++ +V D +
Sbjct: 10 RKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 69
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 211
R H + G+ V A P + G + GG +R Y + YGS++
Sbjct: 70 ARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 128
>gi|431892736|gb|ELK03169.1| Heterogeneous nuclear ribonucleoprotein A/B [Pteropus alecto]
Length = 230
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 52 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPVDPKSNKRRGFVFITFKEEEPVKKVLE 111
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 112 KKFHTISGSKCEIKVAQPKE 131
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ H++ G V RA P+++
Sbjct: 50 KDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQE------------ 97
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GR E+ + KK+FVG L + EDLR+Y
Sbjct: 98 -----------------------------IGRPEAGATV-KKLFVGGLKDDHEEEDLRQY 127
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
F +G I + + K TG RGFGFV F + D++ +R+H+I G+ V + A
Sbjct: 128 FQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T + L+++F ++G I+DV V PK RGFGF+T++ +V D +
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 211
R H++ G+ V A P + G + GG +R Y + YGS++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 135
>gi|209154614|gb|ACI33539.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 359
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEE-VVADRVS 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE V +
Sbjct: 157 KKIFVGGLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEESTVKKCLE 216
Query: 158 RRSHEICGQQVA 169
++ H +CG +V
Sbjct: 217 KKFHNVCGTKVT 228
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YFS+FG + D + TG RGFGF+ F D+V +
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFQTAASVDKVLEQ 133
Query: 159 RSHEICGQQV 168
+ H + G+Q+
Sbjct: 134 KEHRLDGRQI 143
>gi|444509540|gb|ELV09335.1| DAZ-associated protein 1, partial [Tupaia chinensis]
Length = 391
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 82 TLYDHPGSFYGRGESSQRI----GKKIFVGRLPQEATAEDLRRYFSRFGRILDV---YVP 134
L P + GR + R KIFVG +P +LR YF +FG + +V Y
Sbjct: 57 VLASRPHTLDGRNQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDA 116
Query: 135 KRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
++ RGFGF+TF +E D+ V+ H+I G++V + A P D
Sbjct: 117 EKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRD 160
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 159 RSHEICG 165
R H + G
Sbjct: 61 RPHTLDG 67
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ H++ G V RA P+++
Sbjct: 50 KDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQE------------ 97
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GR E+ + KK+FVG L + EDLR+Y
Sbjct: 98 -----------------------------IGRPEAGATV-KKLFVGGLKDDHEEEDLRQY 127
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
F +G I + + K TG RGFGFV F + D++ +R+H+I G+ V + A
Sbjct: 128 FQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 183
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T + L+++F ++G I+DV V PK RGFGF+T++ +V D +
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 211
R H++ G+ V A P + G + GG +R Y + YGS++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 135
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 52/177 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD + RG GF+TF SV+ L+ D H L G + RA KED
Sbjct: 176 KDNATGRSRGFGFLTFKDPASVDALLKDRHILDGKLIDPKRAISKED------------- 222
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+++GK IF+G + T ++ +F
Sbjct: 223 ----------------------------------QEKVGK-IFIGGIDPMVTEQEFDEFF 247
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATP 175
S+FG+I+D + + K TG RGFGF+T+ DRV + + G+ + + A P
Sbjct: 248 SQFGKIIDCQLMIDKDTGRSRGFGFITYDSPAAVDRVCVNKYLTLKGKAMEVKRAAP 304
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K F+G L + T E L +FS++G I+D + K RGFGF+TF + D + +
Sbjct: 144 KTFLGGLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLKD 203
Query: 160 SHEICGQQVAIDSATPLDD 178
H + G+ + A +D
Sbjct: 204 RHILDGKLIDPKRAISKED 222
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ H + G V RA P+++
Sbjct: 81 KDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQE------------ 128
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GR E+ + KK+FVG L + EDLR+Y
Sbjct: 129 -----------------------------IGRPEAGATV-KKLFVGGLKDDHEEEDLRQY 158
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
F +G I + + K TG RGFGFV F + D++ +R+H+I G+ V + A
Sbjct: 159 FQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKA 214
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADRVS 157
+K+F+G L T + L+++F ++G I+DV V PK RGFGF+T++ +V D +
Sbjct: 48 RKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 107
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSLD 211
R H + G+ V A P + G + GG +R Y + YGS++
Sbjct: 108 ARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSIN 166
>gi|224010812|ref|XP_002294363.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969858|gb|EED88197.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 835
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 91 YGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTG-HRGFGFVTF 147
GR +++ +K+FVG LP E T E RYF ++G ++D V + +RT RGFGFVTF
Sbjct: 530 LGRVPATKHDNRKLFVGGLPNEVTDESFLRYFEQYGTVVDSVVLLDRRTKRSRGFGFVTF 589
Query: 148 AEEVVADRVSR 158
A+E VA+ + +
Sbjct: 590 ADEDVANSLLK 600
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFM 186
+ H + G+ + A + A + F+
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKAPVKKIFV 158
>gi|223647646|gb|ACN10581.1| TAR DNA-binding protein 43 [Salmo salar]
Length = 406
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ +A++LR++F ++G + DV++PK R F FV+FA++ VA +
Sbjct: 192 RKVFVGRCTEDISADELRQFFMQYGEVTDVFIPKP--FRAFAFVSFADDQVASSLCGEDL 249
Query: 162 EICGQQVAIDSATP 175
I G V I +A P
Sbjct: 250 IIKGVSVHISNAEP 263
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRRS 160
+ V LP + + +DL+ YFS FG ++ V V + +TG+ +GFGFV F E D+V +
Sbjct: 107 LIVLGLPWKTSEQDLKDYFSTFGEVIMVQVKRDVKTGNSKGFGFVRFTEYETQDKVISQR 166
Query: 161 HEICGQQVAIDSATPLDDAGPSQ 183
H I G+ D P GP +
Sbjct: 167 HMIDGRWC--DCKLPNSKQGPDE 187
>gi|56758132|gb|AAW27206.1| SJCHGC06052 protein [Schistosoma japonicum]
gi|226472196|emb|CAX77134.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472198|emb|CAX77135.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472200|emb|CAX77136.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472202|emb|CAX77137.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472206|emb|CAX77139.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472208|emb|CAX77140.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472212|emb|CAX77142.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472214|emb|CAX77143.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472216|emb|CAX77144.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472220|emb|CAX77146.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472222|emb|CAX77147.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226473414|emb|CAX71392.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 48/176 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S+ RG GF+T+ A SV+ + H + G V RA P+E+
Sbjct: 47 KDPRSQKSRGFGFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREE------------ 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
++ +AA+ KKIFVG L ++ T EDL Y
Sbjct: 95 --------TSPEVHAAV-----------------------KKIFVGALKKDVTNEDLSDY 123
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSA 173
FS+FG + D + + K T RGF FVTF + D+V R H I + + A
Sbjct: 124 FSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKA 179
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KK+F+G L + L+ Y+ ++G I+DV V P+ RGFGFVT+ + D +
Sbjct: 14 KKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDAAQN 73
Query: 158 RRSHEICGQQVAIDSATPLDDAGP 181
R H + G++V A P ++ P
Sbjct: 74 NRPHTVDGKEVDTKRAMPREETSP 97
>gi|15217975|ref|NP_176143.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|12321044|gb|AAG50640.1|AC082643_4 RNA binding protein [Arabidopsis thaliana]
gi|15450912|gb|AAK96727.1| RNA binding protein [Arabidopsis thaliana]
gi|17978725|gb|AAL47356.1| RNA binding protein [Arabidopsis thaliana]
gi|18181938|dbj|BAB83876.1| RNA binding protein [Arabidopsis thaliana]
gi|332195431|gb|AEE33552.1| RNA-binding protein 1 [Arabidopsis thaliana]
Length = 360
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG GF+ FA+ V + DTH + G V V +A K + ++ M
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQ---- 94
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + G + + G +S+ KKIFVG L T E+ + YF
Sbjct: 95 -----FLERKVQQMNGGLREMSSN-------GVTSRT--KKIFVGGLSSNTTEEEFKSYF 140
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
RFGR DV V RGFGFVT+ +E+ V + HE+ ++V + A P
Sbjct: 141 ERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIP 197
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + +E + E L++YFSR+G +L+ V K TG RGFGFV FA + + R
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 160 SHEICGQQVAIDSA 173
+H I G+ V + A
Sbjct: 67 THFILGKPVDVRKA 80
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 11 RGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKE 48
RG GF+T+ S DSVE +M HEL V V RA PKE
Sbjct: 161 RGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKE 199
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YF +G + + +V K TG RGFGFV FA+ ++AD+V
Sbjct: 7 KVFIGGLSWETTDQKLRAYFENYGTVQEAFVSYDKHTGRPRGFGFVVFADPIIADKVISV 66
Query: 160 SHEICGQQVAIDSATPLDDA 179
H I ++V A P D++
Sbjct: 67 QHTIDRREVEAKKALPKDES 86
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 67/183 (36%), Gaps = 41/183 (22%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+ FA + ++ H + V +A PK++ PV + G +
Sbjct: 47 RGFGFVVFADPIIADKVISVQHTIDRREVEAKKALPKDES--PVRKEEQAASGGHRT--- 101
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
KK+FVG L + R YF FG + D
Sbjct: 102 -------------------------------KKVFVGGLAATVDEDTFRAYFEEFGLVDD 130
Query: 131 VYV---PKRTGHRGFGFVTFAEEVVADRVSRRS--HEICGQQVAIDSATPLDDAGPSQNF 185
V + RGFGF+TFA+E D V R I +Q+ I A P D PS
Sbjct: 131 AVVMFDHENKRPRGFGFITFADEESVDAVFARGTIQTIHDKQIEIKRAVPRDSMPPSPRA 190
Query: 186 MMN 188
+ +
Sbjct: 191 LQH 193
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 71/166 (42%), Gaps = 48/166 (28%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD S+ RG GF+T+ A SV+ + H + G V RA P+E+
Sbjct: 47 KDPRSQKSRGFGFVTYRDASSVDAAQNNRPHTVDGKEVDTKRAMPREE------------ 94
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
++ +AA+ KKIFVG L ++ T EDL Y
Sbjct: 95 --------TSPEVHAAV-----------------------KKIFVGALKKDVTNEDLSDY 123
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRVS-RRSHEI 163
FS+FG + D + + K T RGF FVTF + D+V R H I
Sbjct: 124 FSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTI 169
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KK+F+G L + L+ Y+ ++G I+DV V P+ RGFGFVT+ + D +
Sbjct: 14 KKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDAAQN 73
Query: 158 RRSHEICGQQVAIDSATPLDDAGP 181
R H + G++V A P ++ P
Sbjct: 74 NRPHTVDGKEVDTKRAMPREETSP 97
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 174 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 233
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 234 KKFHNVSGSKCEIKVAQPKE 253
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG + D + P RGFGF+ F E ++V +
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 151 KEHRLDGRLIDPKKAMAM 168
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 160 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 219
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 220 KKFHTVSGSKCEIKVAQPKE 239
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 77 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 136
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 137 KEHRLDGRVIDPKKAMAM 154
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 219 KKFHTVSGSKCEIKVAQPKE 238
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|326471297|gb|EGD95306.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton
tonsurans CBS 112818]
Length = 478
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG + QEAT ++ +++F +FGR++D + + K TG RGFGFVTF E +
Sbjct: 72 KIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV 131
Query: 160 SHEICGQQVAIDSATP 175
EI G+ + + A P
Sbjct: 132 PLEIHGKAIEVKKAQP 147
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAE 149
+F+G L E T + L+ YFS+FG + + V R G RGFGF+TF +
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTV-MRDGASGRSRGFGFLTFTD 49
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 36/180 (20%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P G
Sbjct: 43 KDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPR--GMQPEQTRPKEG 100
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ R +SS+ KIFVG +P +LR Y
Sbjct: 101 WKG---------------------------PRSDSSK--SNKIFVGGIPHNCGETELREY 131
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +FG + +V Y ++ RGFGF+TF +E D+ V+ +I G++V + A P D
Sbjct: 132 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFRDIMGKKVEVKRAEPRD 191
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V ++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + G+ + TP
Sbjct: 71 RPHTLDGRNIDPKPCTP 87
>gi|296813155|ref|XP_002846915.1| heterogeneous nuclear ribonucleoprotein HRP1 [Arthroderma otae CBS
113480]
gi|238842171|gb|EEQ31833.1| heterogeneous nuclear ribonucleoprotein HRP1 [Arthroderma otae CBS
113480]
Length = 482
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIFVG + QEAT ++ +++F +FGR++D + + K TG RGFGFVTF E +
Sbjct: 74 KIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV 133
Query: 160 SHEICGQQVAIDSATP 175
EI G+ + + A P
Sbjct: 134 PLEIHGKAIEVKKAQP 149
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEVVADRV 156
+F+G L E T + L+ YFS+FG + + V R G RGFGF+TF + + V
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTV-MRDGASGRSRGFGFLTFTDPKTVNTV 56
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + +D++ +FS+FG I++V +P + +GF F+TF +E+VV + +
Sbjct: 125 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 184
Query: 159 RSHEICGQQVAIDSATPLDD 178
I G++V + ATP D
Sbjct: 185 SKQTINGKEVDVKKATPKPD 204
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
+K+FVG L E T ++LR +FS +G I + V P RGF F+ FA+ D++ S
Sbjct: 44 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 103
Query: 158 RRSHEICGQQV 168
H I ++V
Sbjct: 104 AGDHVINNKKV 114
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|6566348|dbj|BAA88269.1| RNA binding protein [Arabidopsis thaliana]
Length = 381
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG GF+ FA+ V + DTH + G V V +A K + ++ M
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQ---- 94
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + G + + G +S+ KKIFVG L T E+ + YF
Sbjct: 95 -----FLERKVQQMNGGLREMSSN-------GVTSRT--KKIFVGGLSSNTTEEEFKSYF 140
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATP 175
RFGR DV V RGFGFVT+ +E+ V + HE+ ++V + A P
Sbjct: 141 ERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIP 197
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + +E + E L++YFSR+G +L+ V K TG RGFGFV FA + + R
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 160 SHEICGQQVAIDSA 173
+H I G+ V + A
Sbjct: 67 THFILGKPVDVRKA 80
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
RG GF+T+ S DSVE +M + HEL V V RA PKE
Sbjct: 161 RGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKE 199
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 214 KKFHTISGSKCEIKVAQPKE 233
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 143
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 144 KKFHTISGSKCEIKVAQPKE 163
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 61 KEHRLDGRVIDPKKAMAM 78
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 53/178 (29%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+TF + + ++ D H + G + ++ P+E +P R
Sbjct: 42 RDRQTGRPRGFGFVTFTEPAAADAVVEDVHVIDGRQIDAKKSVPQE--MKPKAR------ 93
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
K+FVG L + T + R YF
Sbjct: 94 ----------------------------------------KVFVGGLSPDTTEDQFREYF 113
Query: 123 SRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
S+FG +++ + + +G RGFGFVTFAE+ A+ V + H++ G++V + ATP
Sbjct: 114 SQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFAAGTMHDLGGKKVEVKPATP 171
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+F+G L + T E LR +FS++G I++ V ++TG RGFGFVTF E AD V
Sbjct: 10 KLFLGGLSWDTTEEKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVED 69
Query: 160 SHEICGQQVAIDSATPLD 177
H I G+Q+ + P +
Sbjct: 70 VHVIDGRQIDAKKSVPQE 87
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMV--DTHELGGSTVVVDRATPK 47
+D S RG GF+TFA S E++ H+LGG V V ATPK
Sbjct: 126 QDHMSGRSRGFGFVTFAEDASAESVFAAGTMHDLGGKKVEVKPATPK 172
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 64/170 (37%), Gaps = 54/170 (31%)
Query: 11 RGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYI 69
RG GFI F A SVE ++ H L G + +A + D PV
Sbjct: 85 RGFGFILFKDATSVEKVLDQKEHRLDGRVIDPKKAMAMKKD--PV--------------- 127
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRIL 129
KKIFVG L EAT E +R YF FG I
Sbjct: 128 --------------------------------KKIFVGGLNPEATEEKIREYFGEFGEIE 155
Query: 130 DVYV---PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSATP 175
+ + PK RGF F+TF EE +V ++ H I G + I A P
Sbjct: 156 AIELPMDPKSNKRRGFVFITFKEEDPVKKVLEKKFHTISGSKCEIKVAQP 205
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 45 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKVLDQ 104
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 105 KEHRLDGRVIDPKKAMAM 122
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 76/176 (43%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D +K RG GF+T++ + V+ M H++ G V RA +ED +P
Sbjct: 762 RDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKP-------- 813
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+++ KKIFVG + ++ +LR Y
Sbjct: 814 ----GAHLTV------------------------------KKIFVGGIKEDTEEYNLRDY 839
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
F ++G+I ++V +++G RGF FVTF + D+ V ++ H I G + A
Sbjct: 840 FEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA 895
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Query: 92 GRGESSQRIG----------KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTG 138
GRGES ++ +K+F+G L E T + LR +F ++G + D V P+
Sbjct: 709 GRGESGLKMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKR 768
Query: 139 HRGFGFVTFA--EEVVADRVSRRSHEICGQQVAIDSATPLDDA 179
RGFGFVT++ EEV A + R H++ G+ V A +D+
Sbjct: 769 SRGFGFVTYSCVEEVDAAMCA-RPHKVDGRVVEPKRAVSREDS 810
>gi|110738919|dbj|BAF01381.1| hypothetical protein [Arabidopsis thaliana]
Length = 205
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ +D+ + RG GFITFA V+ ++ DTH + G V + R PK
Sbjct: 50 IMRDRHTGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPK------------- 96
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GA G +S KKIFVG +P T ++L+
Sbjct: 97 ------------------GA-----------GGNQSKDIKTKKIFVGGIPSTVTEDELKD 127
Query: 121 YFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
+F+++G +++ V + RGFGFV F E V D + + + I D+ L
Sbjct: 128 FFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMID----MADTQVSLY 183
Query: 178 DAGPSQNFMMNAAETF 193
G FMM F
Sbjct: 184 KWGLEFWFMMTYLSWF 199
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + + TG RGFGF+TFA+ V D+V
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
+H I G+QV I P AG +Q+ + + F G
Sbjct: 80 THVINGKQVEIKRTIP-KGAGGNQSKDIKTKKIFVG 114
>gi|221220742|gb|ACM09032.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADR-VS 157
KKIFVG L EAT E +R YF FG I + +P K RGF F+TF EE + +
Sbjct: 166 KKIFVGGLNPEATEETIREYFGTFGEIESIELPVDLKFKKRRGFIFITFKEEATVKKCLE 225
Query: 158 RRSHEICGQQVA 169
++ H +CG +V
Sbjct: 226 KKFHNVCGTKVT 237
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YFS+FG + D + TG RGFGF+ F E D+V +
Sbjct: 83 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKEAGSVDKVLEQ 142
Query: 159 RSHEICGQQV 168
+ H + G+Q+
Sbjct: 143 KEHRLDGRQI 152
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 131 KEHRLDGRVIDPKKAMAM 148
>gi|223646910|gb|ACN10213.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
gi|223672773|gb|ACN12568.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADR-VS 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE + +
Sbjct: 166 KKIFVGGLNPEATEETIREYFGTFGEIESIELPVDPKFKKRRGFIFITFKEEATVKKCLE 225
Query: 158 RRSHEICGQQVA 169
++ H +CG +V
Sbjct: 226 KKFHNVCGTKVT 237
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YFS+FG + D + TG RGFGF+ F E D+V +
Sbjct: 83 KMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKEAGSVDKVLEQ 142
Query: 159 RSHEICGQQV 168
+ H + G+Q+
Sbjct: 143 KEHRLDGRQI 152
>gi|47217429|emb|CAG00789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 476
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 36/170 (21%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GF+ F + V ++ H L G + TP+ +P + G
Sbjct: 33 KDKTTNQSRGFGFVKFKDPNCVRTVLETKPHNLDGRNIDPKPCTPR--GMQPEKSRTKEG 90
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ A KKIFVG +P +LR Y
Sbjct: 91 WKGSKA-----------------------------DSNKSKKIFVGGIPHNCGEPELRDY 121
Query: 122 FSRFGRILDV---YVPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQ 167
F+RFG + +V Y ++ RGFGF+TF AE+ V V+ H+I G++
Sbjct: 122 FNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKK 171
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK---RTGHRGFGFVTFAE-EVVADRVSR 158
K+FVG L T E LR YFS++G ++D + K RGFGFV F + V +
Sbjct: 1 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 60
Query: 159 RSHEICGQQVAIDSATP 175
+ H + G+ + TP
Sbjct: 61 KPHNLDGRNIDPKPCTP 77
>gi|224065561|ref|XP_002301858.1| predicted protein [Populus trichocarpa]
gi|222843584|gb|EEE81131.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 51/183 (27%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
+D+ + RG GF+ F+ ++ ++ D H + G TV++
Sbjct: 39 RDKTTGRPRGFGFVVFSDPSVLDPVLHDKHTIDGRTVII--------------------- 77
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
+S + +G KKIFVG LP T + R+YF
Sbjct: 78 ----LPLSLLWGLSCIGT---------------------KKIFVGGLPSTVTEDGFRQYF 112
Query: 123 SRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLDD 178
+G + DV V + RGFGF+TF E D V +++ HE+ G+ V + A P D
Sbjct: 113 QSYGHVNDVVVMYDQQTQRPRGFGFITFDSEDAVDNVLQKTFHELNGKLVEVKRALP-KD 171
Query: 179 AGP 181
A P
Sbjct: 172 ANP 174
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + + T + LR +F+++G + V + K TG RGFGFV F++ V D V
Sbjct: 7 KLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSDPSVLDPVLHD 66
Query: 160 SHEICGQQVAI 170
H I G+ V I
Sbjct: 67 KHTIDGRTVII 77
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSR 158
+K+FVG + E TAE YF +FG ++D + + TG+ RGFGFVTFA+ VA++V
Sbjct: 89 RKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLE 148
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP------MRTYGRMYGSLDF 212
H I ++V + P D + + F G P ++ Y +YG +
Sbjct: 149 EDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIE 208
Query: 213 DDWGYGMGSGRPSRG 227
Y +GR SRG
Sbjct: 209 HQIMYDHHTGR-SRG 222
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 46/170 (27%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TFA + E ++ + H + V + R P+ G + I
Sbjct: 130 RGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPR---------------GDKDTDIK 174
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
A ++ +KIFVG LP ++L+ YF +G I++
Sbjct: 175 AVSK--------------------------TRKIFVGGLPPLLEEDELKNYFCVYGDIIE 208
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRVSR--RSHEICGQQVAIDSATP 175
+ TG RGFGFVTF E DR+ + HE+ +QV I A P
Sbjct: 209 HQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEP 258
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 11 RGIGFITFASADSVENLMVD--THELGGSTVVVDRATPK----EDDFRPVGRMSHGGYGA 64
RG GF+TF + DSV+ L D HELG V + RA PK ++ FR G + G Y
Sbjct: 221 RGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNSFRSYG--ASGKYDQ 278
Query: 65 YNAYISAATR 74
++Y A
Sbjct: 279 EDSYSGKANE 288
>gi|154183823|gb|ABS70764.1| Hnrp1 [Haplochromis burtoni]
Length = 289
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+T++S V+ M H++ G V RA +ED RP
Sbjct: 47 RDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRP-------- 98
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+I+ KKIFVG + ++ LR Y
Sbjct: 99 ----GAHITV------------------------------KKIFVGGIKEDTEESHLRDY 124
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
F +FG+I +D+ + TG RGF FVTF + DR V ++ H I + A
Sbjct: 125 FQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKA 180
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 142
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 143 KKFHTISGSKCEIKVAQPKE 162
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 160 SHEICGQQVAIDSATPL 176
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|30682550|ref|NP_851001.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17065240|gb|AAL32774.1| Unknown protein [Arabidopsis thaliana]
gi|20260060|gb|AAM13377.1| unknown protein [Arabidopsis thaliana]
gi|332641793|gb|AEE75314.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 231
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHG 60
+ +D+ + RG GFITFA V+ ++ DTH + G V + R PK
Sbjct: 50 IMRDRHTGQPRGFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPK------------- 96
Query: 61 GYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRR 120
GA G +S KKIFVG +P T ++L+
Sbjct: 97 ------------------GA-----------GGNQSKDIKTKKIFVGGIPSTVTEDELKD 127
Query: 121 YFSRFGRILDVYVPK---RTGHRGFGFVTFAEEVVADRVSRRSHEICGQQVAIDSATPLD 177
+F+++G +++ V + RGFGFV F E V D + + + I D+ L
Sbjct: 128 FFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMID----MADTQVSLY 183
Query: 178 DAGPSQNFMMNAAETF 193
G FMM F
Sbjct: 184 KWGLEFWFMMTYLSWF 199
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L ++ T ++F ++G I D + + TG RGFGF+TFA+ V D+V
Sbjct: 20 KIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIED 79
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
+H I G+QV I P AG +Q+ + + F G
Sbjct: 80 THVINGKQVEIKRTIP-KGAGGNQSKDIKTKKIFVG 114
>gi|312104391|ref|XP_003150391.1| hypothetical protein LOAG_14850 [Loa loa]
Length = 104
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR 158
KK+F+G L +T ED++ YF ++G++ D + K T HRGFGF+TF + V+D+V
Sbjct: 25 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 84
Query: 159 -RSHEICGQQVAIDSATP 175
HEI G+ V A P
Sbjct: 85 IHFHEINGKMVECKKAQP 102
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ ++ HRG GFITF + D + + + HE+ G V +A PKE
Sbjct: 59 DKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQPKE 104
>gi|209882765|ref|XP_002142818.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558424|gb|EEA08469.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 211
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRVSR 158
+KIFVG LP + + LRRYF +FG+I D + K++G RGFGFVTF + D + R
Sbjct: 98 EKIFVGNLPTTCSQDILRRYFEQFGQISDCVMMCDKKSGVGRGFGFVTFTSTSIVDDIIR 157
Query: 159 R--SHEICGQQVAIDSATP 175
H I GQ V + A+P
Sbjct: 158 AYDEHYIDGQWVEVKRASP 176
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 145 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 204
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 205 KKFHTVSGSKCEIKVAQPKE 224
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 62 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 121
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 122 KEHRLDGRVIDPKKAMAM 139
>gi|343455562|gb|AEM36348.1| At1g58470 [Arabidopsis thaliana]
Length = 360
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
K++ + RG GF+ FA+ V + DTH + G V V +A K + + M
Sbjct: 39 KEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHEIYHQPFSMQ---- 94
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
++ + G + + G +S+ KKIFVG L T E+ + YF
Sbjct: 95 -----FLERKMQQMNGGLREMSSN-------GVASR--SKKIFVGGLSSNTTEEEFKSYF 140
Query: 123 SRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLDD 178
RFGR DV V RGFGFVT+ +E+ V + HE+ ++V + A P +
Sbjct: 141 ERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEG 200
Query: 179 AGPSQNFMMNAAETFGGY 196
+ +N ++ +
Sbjct: 201 IQSNNGNAVNVPPSYSSF 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + +E + E L++YFSR+G +L+ V K TG RGFGFV FA + + R
Sbjct: 7 KLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRD 66
Query: 160 SHEICGQQVAIDSA 173
+H I G+ V + A
Sbjct: 67 THFILGKPVDVRKA 80
>gi|156083280|ref|XP_001609124.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis T2Bo]
gi|154796374|gb|EDO05556.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP) domain containing
protein [Babesia bovis]
Length = 244
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 5/73 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG----HRGFGFVTFAEEV-VADRVS 157
+IF+ +L EAT DL+ YFS+FG I D+++P+ +G ++G+GFV+F E + ++
Sbjct: 146 RIFISKLAYEATHNDLQSYFSQFGNITDIHIPRYSGNPAVNKGYGFVSFDNEASLVKALN 205
Query: 158 RRSHEICGQQVAI 170
SH I G++V +
Sbjct: 206 VSSHIILGREVVL 218
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD + RG GFIT+ + V+ + HE+ G TV RA P+ED P M+
Sbjct: 50 KDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMT--- 106
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
K+FVG L ++ T E+LR Y
Sbjct: 107 ---------------------------------------VTKLFVGGLKKDVTHEELREY 127
Query: 122 FSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
FS++G I + V K +G RGFGFVTF + D+ + + H I + + A
Sbjct: 128 FSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKKA 183
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE-EVVADRVS 157
+K+F+G L T L+ ++S++G I+DV V K RT RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 210
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 152 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 211
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 212 KKFHTVSGSKCEIKVAQPKE 231
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 128
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 129 KEHRLDGRVIDPKKAMAM 146
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 158 RRSHEICGQQVAIDSATP 175
++ H I G + I A P
Sbjct: 143 KKFHTISGSKCEIKVAQP 160
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 160 SHEICGQQVAIDSATPL 176
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 219 KKFHTVSGSKCEIKVAQPKE 238
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 136 KEHRLDGRVIDPKKAMAM 153
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVS- 157
KKIF+G L + ED+++YFS+FG+I + + K T HRGFGFVTF E AD+
Sbjct: 89 KKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKACD 148
Query: 158 RRSHEICGQQVAIDSATP 175
+ H I ++V + A P
Sbjct: 149 TQYHLINNKKVEVKKAQP 166
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRR 159
K+F+G L + TAE LR++F +FG + + V P RGFGF+TF + D V
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 160 -SHEICGQQVAIDSATP 175
+ E+ G+++ A P
Sbjct: 61 GAQELDGKKIDPKLAVP 77
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT--HELGGSTVVVDRATPKE 48
D+ ++ HRG GF+TF S +S + DT H + V V +A PKE
Sbjct: 123 DKATQRHRGFGFVTFESENSADK-ACDTQYHLINNKKVEVKKAQPKE 168
>gi|390341916|ref|XP_789716.3| PREDICTED: TAR DNA-binding protein 43-like [Strongylocentrotus
purpuratus]
Length = 505
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
KK+F+GRL + T EDL FS++G ++DV++PK RGF FVT AD +
Sbjct: 206 KKLFIGRLTSDTTKEDLFDIFSKYGEVVDVFIPK--PFRGFAFVTMNSSKDADEIVGEDL 263
Query: 162 EICGQQVAIDSATP 175
I G V I+ A P
Sbjct: 264 IIKGNSVYINRAEP 277
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 143
Query: 158 RRSHEICGQQVAIDSATP 175
++ H I G + I A P
Sbjct: 144 KKFHTISGSKCEIKVAQP 161
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 61 KEHRLDGRVIDPKKAMAM 78
>gi|426239738|ref|XP_004013776.1| PREDICTED: TAR DNA-binding protein 43 [Ovis aries]
Length = 415
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSH 161
+K+FVGR ++ TA++LR++F ++G ++DV++PK R F FVTFA++ +
Sbjct: 191 RKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKP--FRAFAFVTFADD------QESAQ 242
Query: 162 EICGQQVAIDS-ATPLDDAGPSQN 184
CG+ + I + + +A P N
Sbjct: 243 SFCGEDLIIKGISVHISNAEPKHN 266
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVAD 154
Q+ I +G LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 101 QKTSDLIVLG-LPWKTTEQDLKDYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQV 159
Query: 155 RVSRRSHEICGQQVAIDSATPLDDAGPSQ 183
+V + H I G+ D P P +
Sbjct: 160 KVMSQRHMIDGRWC--DCKLPNSKQSPDE 186
>gi|1094717|prf||2106321A stage-specific activator protein
Length = 404
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 88 GSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRT---GHRGFGF 144
GS G QR KK+FVG + Q+AT EDL F G + DV++ T HRGFGF
Sbjct: 86 GSEKRMGPGDQRT-KKVFVGGISQQATKEDLYELFRSHGNVEDVHIMNDTDTGKHRGFGF 144
Query: 145 VTFAEEVVADRVSRRSH-EICGQQVAIDSATP 175
VT E +++ R H E+ G+ + I A P
Sbjct: 145 VTLDSEEAVEKLVRMHHLELKGKSMEIKKAQP 176
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV----PKRTGHRGFGFVTFAEEVVADRVS- 157
KIFVG + + A+ R YF +FG++ D+ + K ++GFGFVTFA+ D V+
Sbjct: 7 KIFVGGVDRNTHADTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVTN 66
Query: 158 RRSHEICGQ 166
++H + G+
Sbjct: 67 EKNHNLEGK 75
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + +++R +FS FG IL+V +P + +GF F+TF +E+VV D +
Sbjct: 124 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 183
Query: 159 RSHEICGQQVAIDSATPLDD 178
I G++V + ATP D
Sbjct: 184 PKRTIGGKEVDVKRATPKPD 203
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKED 49
MP D+ +G FITF S V +L+ +GG V V RATPK D
Sbjct: 154 MPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 138 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 197
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 198 KKFHTISGSKCEIKVAQPKE 217
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 98 QRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVAD 154
Q+ +K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + +
Sbjct: 50 QKPPRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVE 109
Query: 155 RV-SRRSHEICGQQVAIDSATPL 176
+V ++ H + G+ + A +
Sbjct: 110 KVLDQKEHRLDGRVIDPKKAMAM 132
>gi|66357694|ref|XP_626025.1| musashi. RRM domain containing protein, splicing related
[Cryptosporidium parvum Iowa II]
gi|46227309|gb|EAK88259.1| musashi. RRM domain containing protein, splicing related
[Cryptosporidium parvum Iowa II]
Length = 507
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 16/181 (8%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPK----EDDFRPVGRMSHGGYGAYN 66
RG GFITFAS +SV+ ++ + G + RA P+ ++ ++
Sbjct: 64 RGFGFITFASEESVDAVLSSPQIVDGKEIDCKRAVPRGVIQANEADESADSNNQASNNSG 123
Query: 67 AYISAATRYAALGAPTLYDHPGSFYGRGE-------SSQRIGKKIFVGRLPQEATAEDLR 119
+ + + + GR S KIFVG LPQ T E LR
Sbjct: 124 NTNANNANISGNSGSNTANSNSNVTGRSHIGGAGGSSGGFSATKIFVGGLPQSCTDEKLR 183
Query: 120 RYFSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVSRR--SHEICGQQVAIDSAT 174
+F ++G I L V V + T HRGFGFV + + V R H+I + V A
Sbjct: 184 EHFGKYGTIKNLSVMVDRDTNRHRGFGFVEYESPDAVEEVMRHYYDHQIDNKWVECKKAL 243
Query: 175 P 175
P
Sbjct: 244 P 244
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRV 156
+ KIF G L T LR +FS +G I+D V K TG RGFGF+TFA E D V
Sbjct: 21 VPAKIFCGGLSDVTTNASLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEESVDAV 80
Query: 157 SRRSHEICGQQVAIDSATP 175
+ G+++ A P
Sbjct: 81 LSSPQIVDGKEIDCKRAVP 99
>gi|67613628|ref|XP_667314.1| ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54658432|gb|EAL37079.1| ribonucleoprotein [Cryptosporidium hominis]
Length = 502
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 16/181 (8%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPK----EDDFRPVGRMSHGGYGAYN 66
RG GFITFAS +SV+ ++ + G + RA P+ ++ ++
Sbjct: 59 RGFGFITFASEESVDAVLSSPQIVDGKEIDCKRAVPRGVIQANEADESADSNNQASNNSG 118
Query: 67 AYISAATRYAALGAPTLYDHPGSFYGRGE-------SSQRIGKKIFVGRLPQEATAEDLR 119
+ + + + GR S KIFVG LPQ T E LR
Sbjct: 119 NTNANNANISGNSGSNTANSNSNVTGRSHIGGAGGSSGGFSATKIFVGGLPQSCTDEKLR 178
Query: 120 RYFSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADRVSRR--SHEICGQQVAIDSAT 174
+F ++G I L V V + T HRGFGFV + + V R H+I + V A
Sbjct: 179 EHFGKYGTIKNLSVMVDRDTNRHRGFGFVEYESPDAVEEVMRHYYDHQIDNKWVECKKAL 238
Query: 175 P 175
P
Sbjct: 239 P 239
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADRV 156
+ KIF G L T LR +FS +G I+D V K TG RGFGF+TFA E D V
Sbjct: 16 VPAKIFCGGLSDVTTNASLRTHFSPYGEIVDSVVLTEKTTGRSRGFGFITFASEESVDAV 75
Query: 157 SRRSHEICGQQVAIDSATP 175
+ G+++ A P
Sbjct: 76 LSSPQIVDGKEIDCKRAVP 94
>gi|16552365|dbj|BAB71295.1| unnamed protein product [Homo sapiens]
Length = 289
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VS 157
KIFVG +P +LR YF +FG + +V Y ++ RGFGF+TF +E D+ V+
Sbjct: 24 NKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN 83
Query: 158 RRSHEICGQQVAIDSATPLD 177
H+I G++V + A P D
Sbjct: 84 MHFHDIMGKKVEVKRAEPRD 103
>gi|444706633|gb|ELW47959.1| Heterogeneous nuclear ribonucleoprotein A/B [Tupaia chinensis]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 45 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 104
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 105 KKFHTISGSKCEIKVAQPKE 124
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD + RG GFIT+ + V+ + HE+ G TV RA P+ED P M+
Sbjct: 50 KDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMT--- 106
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
K+FVG L ++ T E+LR Y
Sbjct: 107 ---------------------------------------VTKLFVGGLKKDVTHEELREY 127
Query: 122 FSRFGRILDVYVP--KRTGH-RGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
FS++G I + V K +G RGFGFVTF + D+ + + H I + + A
Sbjct: 128 FSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPHHIGSSRADVKKA 183
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE-EVVADRVS 157
+K+F+G L T L+ ++S++G I+DV V K RT RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 210
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
>gi|256073766|ref|XP_002573199.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 431
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRI- 128
S ++ + + +P DH + ++ R KK+F+G + TA++L+ +FS FG++
Sbjct: 90 SNSSTNSPINSPLALDHWSATLLAAQALVR-TKKVFIGGVSTGTTADELKTFFSEFGKVE 148
Query: 129 -LDVYVPKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
++ + K T HRGFGFVTF E A++V HE+ G+ V A P
Sbjct: 149 TCELMMDKATSRHRGFGFVTFESEQAAEKVCTIHYHELNGKMVEAKRALP 198
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S + E + + HEL G V RA PKE
Sbjct: 155 DKATSRHRGFGFVTFESEQAAEKVCTIHYHELNGKMVEAKRALPKE 200
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFM 186
+ H + G+ + A + A + F+
Sbjct: 131 KEHRLDGRVIDPKKAMAMKKAPVKKIFV 158
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + +D++ +FS+FG I++V +P + +GF F+TF +E+VV + +
Sbjct: 137 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 196
Query: 159 RSHEICGQQVAIDSATPLDD 178
I G++V + ATP D
Sbjct: 197 SKQTINGKEVDVKKATPKPD 216
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
+K+FVG L E T ++LR +FS +G I + V P RGF F+ FA+ D++ S
Sbjct: 56 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMS 115
Query: 158 RRSHEICGQQV 168
H I ++V
Sbjct: 116 AGDHVINNKKV 126
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 219 KKFHTVSGSKCEIKVAQPKE 238
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 71 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 130
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 131 KEHRLDGRVI 140
>gi|242042864|ref|XP_002459303.1| hypothetical protein SORBIDRAFT_02g002070 [Sorghum bicolor]
gi|241922680|gb|EER95824.1| hypothetical protein SORBIDRAFT_02g002070 [Sorghum bicolor]
Length = 329
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
KK+F+G L T E+ R YF FG + DV V + RGFGFVTF E +V R
Sbjct: 97 KKVFIGGLRDNITEEEFRSYFETFGTVTDVVVIYDSATSRSRGFGFVTFDSEEAVGKVMR 156
Query: 159 RS-HEICGQQVAIDSATPLDDA 179
+S H + G +V A P D+A
Sbjct: 157 QSFHNLNGTKVEAKIAIPKDEA 178
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 158 RRSHEICGQQVAIDSATP 175
++ H + G + I A P
Sbjct: 219 KKFHTVSGSKCEIKVAQP 236
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + +++R +FS FG IL+V +P + +GF F+TF +E+VV D +
Sbjct: 124 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 183
Query: 159 RSHEICGQQVAIDSATPLDD 178
I G++V + ATP D
Sbjct: 184 PKRTIGGKEVDVKRATPKPD 203
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKED 49
MP D+ +G FITF S V +L+ +GG V V RATPK D
Sbjct: 154 MPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + +D++ +FS+FG I++V +P + +GF F+TF +E+VV + +
Sbjct: 155 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 214
Query: 159 RSHEICGQQVAIDSATPLDD 178
I G++V + ATP D
Sbjct: 215 SKQTINGKEVDVKKATPKPD 234
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV 156
+K+FVG L E T ++LR +FS +G I + V P RGF F+ FA+ D++
Sbjct: 74 RKLFVGGLSWETTDKELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 131
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 219 KKFHTVSGSKCEIKVAQPKE 238
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 47/180 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ A V++ ++ H + G V RA ++D P
Sbjct: 50 KDPKTKRSRGFGFITYSKAHMVDDAQLNRPHRIDGRMVETKRAVARQDIKNP-------- 101
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
GA KK+F+G + + E LR Y
Sbjct: 102 ---------------EAGATV-------------------KKLFIGGIKDDHDEEQLREY 127
Query: 122 FSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRRS-HEICGQQVAIDSATPLD 177
FS +G + +V + G RGFGFV F + D++ + H+I G+Q+ + A P D
Sbjct: 128 FSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDKICLNAPHKINGKQLDVKKALPKD 187
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 100 IGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAE-EVVADR 155
+ +KIF+G L + E L+ +F ++G I+DV V PK RGFGF+T+++ +V D
Sbjct: 15 VHRKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDA 74
Query: 156 VSRRSHEICGQQVAIDSATPLDD 178
R H I G+ V A D
Sbjct: 75 QLNRPHRIDGRMVETKRAVARQD 97
>gi|312379326|gb|EFR25637.1| hypothetical protein AND_08860 [Anopheles darlingi]
Length = 357
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 47/189 (24%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD-THELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ + +++ + H++ G V RA P++D RP
Sbjct: 62 KDPKTKRSRGFGFITYSKSYMIDDTQANRPHKIDGRVVEPKRAVPRQDINRP-------- 113
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
E+ + KK+FVG L + E LR Y
Sbjct: 114 ---------------------------------EAGSSV-KKLFVGGLRDDFDEEHLREY 139
Query: 122 FSRFGRILD--VYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
FS++G ++ + K G RGFGFV F + D+ + ++SH I + + + A P
Sbjct: 140 FSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKLLDVKKALPKQ 199
Query: 178 DAGPSQNFM 186
D +N M
Sbjct: 200 DMDRYKNDM 208
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGR---ILDVYVPKRTGHRGFGFVTFAEE-VVADRVS 157
+K+F+G L T + L+ YF ++G+ ++ + PK RGFGF+T+++ ++ D +
Sbjct: 29 RKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKSYMIDDTQA 88
Query: 158 RRSHEICGQQVAIDSATPLDD 178
R H+I G+ V A P D
Sbjct: 89 NRPHKIDGRVVEPKRAVPRQD 109
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTFAEEVVADRVSRR 159
KIFVG L E + +++R YF++FG I+++ +P ++ + F F+TF E V + + +
Sbjct: 121 KIFVGGLIPEISDDEIRAYFAQFGNIVEMEMPFDKQKNQRKAFCFITFDSETVVNELLKT 180
Query: 160 SHE-ICGQQVAIDSATPLDDAGPSQNF 185
+ I G++V + ATP D P N
Sbjct: 181 PKQTISGKEVDVKKATPKPDNAPMMNI 207
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 92 GRGESSQRIGK----KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGF 144
G G+SS+ IG+ K+FVG L E T ++LR +F ++G I + V P RGF F
Sbjct: 27 GGGDSSE-IGRDDDRKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAF 85
Query: 145 VTFAEEVVADR-VSRRSHEICGQQV 168
+ + D+ V+ H I ++V
Sbjct: 86 IVYKSADSIDKVVAAGDHIINNKKV 110
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 158 RRSHEICGQQVAIDSATP 175
++ H + G + I A P
Sbjct: 219 KKFHTVSGSKCEIKVAQP 236
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 174 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 233
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 234 KKFHNVSGSKCEIKVAQPKE 253
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG + D + P RGFGF+ F E ++V +
Sbjct: 91 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 150
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 151 KEHRLDGRLIDPKKAMAM 168
>gi|355557536|gb|EHH14316.1| hypothetical protein EGK_00221 [Macaca mulatta]
Length = 270
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 9/70 (12%)
Query: 101 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRS 160
+K+FVGR ++ T ++LR +FS++G ++DV++PK R F FVTFA++ +A
Sbjct: 190 SRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPK--PFRAFAFVTFADDQIA------- 240
Query: 161 HEICGQQVAI 170
+CG+ + I
Sbjct: 241 QSLCGEDLMI 250
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 98 QRIGKK---IFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEV 151
+R G+K + V LP + T +DL+ YFS FG +L V V K +TGH +GFGFV F E
Sbjct: 97 KRAGQKPSDLIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYE 156
Query: 152 VADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGG 195
+V + H I G+ D P ++ SQ+ + + + F G
Sbjct: 157 TQVKVMSQRHMIDGRWC--DCKLP--NSKQSQDEPLRSRKVFVG 196
>gi|353231613|emb|CCD78031.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 438
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 70 SAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRI- 128
S ++ + + +P DH + ++ R KK+F+G + TA++L+ +FS FG++
Sbjct: 90 SNSSTNSPINSPLALDHWSATLLAAQALVR-TKKVFIGGVSTGTTADELKTFFSEFGKVE 148
Query: 129 -LDVYVPKRTG-HRGFGFVTFAEEVVADRVSR-RSHEICGQQVAIDSATP 175
++ + K T HRGFGFVTF E A++V HE+ G+ V A P
Sbjct: 149 TCELMMDKATSRHRGFGFVTFESEQAAEKVCTIHYHELNGKMVEAKRALP 198
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 DQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKE 48
D+ + HRG GF+TF S + E + + HEL G V RA PKE
Sbjct: 155 DKATSRHRGFGFVTFESEQAAEKVCTIHYHELNGKMVEAKRALPKE 200
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRVSRR 159
K+F+G L E T + LR YFS++G+++D+ + K T RGFGF+TF E D V +
Sbjct: 158 KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVVKT 217
Query: 160 SHEICGQQVAIDSATP 175
H + G+ + A P
Sbjct: 218 QHILDGKVIDPKRAIP 233
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 81/209 (38%), Gaps = 55/209 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGY 62
KD + RG GF+TF SV+ ++ H L G + RA P+E+
Sbjct: 190 KDTNTGRSRGFGFLTFDEPSSVDEVVKTQHILDGKVIDPKRAIPREE------------- 236
Query: 63 GAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYF 122
Q KIFVG + + ++ +F
Sbjct: 237 -----------------------------------QDKTGKIFVGGIGADVRPKEFEEFF 261
Query: 123 SRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLDD 178
+++G I+D + + K TG RGFGFVT+ DRV + + G+++ I A P
Sbjct: 262 AQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIEIKRAEPRHM 321
Query: 179 AGPSQNFMMNAAETFGGYGGPMRTYGRMY 207
Q +AA+ F G PM +MY
Sbjct: 322 QKQQQGGDTSAAQGFPGMANPM---AQMY 347
>gi|125572147|gb|EAZ13662.1| hypothetical protein OsJ_03579 [Oryza sativa Japonica Group]
Length = 312
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRI--------LDVYVPKRTGHRGFGFVTFA-EEVV 152
+KIFVG LP AT + L+ YF++FG + L+ +P RGFGF+ FA EE
Sbjct: 124 RKIFVGGLPVSATEKKLKEYFNKFGEVNRAIVVIDLNTKMP-----RGFGFIQFASEEST 178
Query: 153 ADRVSRRSHEICGQQVAIDSATP 175
A + + H +CGQ V + A P
Sbjct: 179 ARALKKDKHFLCGQWVEVSLAMP 201
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP--KRTG-HRGFGFVTFAE 149
K+FVG +P + +LR FSRFG + V P K+TG RGF FV F
Sbjct: 30 KVFVGGVPLGTSESELRAQFSRFGTVAFVGAPKNKQTGAARGFAFVQFVN 79
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 143
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 144 KKFHNVSGSKCEIKVAQPKE 163
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG + D + P RGFGF+ F E ++V +
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 61 KEHRLDGRLIDPKKAMAM 78
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 142
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 143 KKFHNVSGSKCEIKVAQPKE 162
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+FVG L + + +DL+ YF++FG + D + P RGFGF+ F E ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQK 60
Query: 160 SHEICGQQVAIDSATPL 176
H + G+ + A +
Sbjct: 61 EHRLDGRLIDPKKAMAM 77
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF +FG I + + PK RGF F+TF EE +V
Sbjct: 159 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 218
Query: 158 RRSHEICGQQVAIDSATP 175
++ H + G + I A P
Sbjct: 219 KKFHTVSGSKCEIKVAQP 236
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135
Query: 159 RSHEICGQQV 168
+ H + G+ +
Sbjct: 136 KEHRLDGRVI 145
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 62/149 (41%), Gaps = 46/149 (30%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD + RG GFIT+ + V+ + HE+ G TV RA P+ED P M+
Sbjct: 50 KDGRTNRSRGFGFITYKEPEMVDAAQANRPHEIDGKTVEAKRAMPREDSNSPESHMT--- 106
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
K+FVG L ++ T E+LR Y
Sbjct: 107 ---------------------------------------VTKLFVGGLKKDVTHEELREY 127
Query: 122 FSRFGRILDVYVP--KRTGH-RGFGFVTF 147
FS++G I + V K +G RGFGFVTF
Sbjct: 128 FSKYGNITECEVVAWKESGESRGFGFVTF 156
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAE-EVVADRVS 157
+K+F+G L T L+ ++S++G I+DV V K RT RGFGF+T+ E E+V +
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDAAQA 76
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGG-----PMRTYGRMYGSL 210
R HEI G+ V A P +D+ ++ M GG +R Y YG++
Sbjct: 77 NRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADR-VS 157
KKIFVG L EAT E++R YF +G I ++ + PK RGF F+T+ EE A + +
Sbjct: 140 KKIFVGGLIPEATEENIREYFGEYGEIENIELPLDPKSNKRRGFIFITYKEEASAKKCLE 199
Query: 158 RRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFG-GYGGPMRTYGRMYGS 209
+ H I G + + A P + Q + G GYGG + + + YG+
Sbjct: 200 NKFHTIEGSRCELKLAQPKEVYQQQQYRGRSGGSRAGWGYGGNNQGWNQGYGN 252
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTG---HRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG + D + + RGFGFV F + ++V +
Sbjct: 57 KMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDPSSVEKVLEQ 116
Query: 159 RSHEICGQQVAIDSATPLDDAGPSQNFM---------MNAAETFGGYG 197
+ H + G+ + A + + F+ N E FG YG
Sbjct: 117 KEHRLDGRLIDPKRAMAMKKEPVKKIFVGGLIPEATEENIREYFGEYG 164
>gi|255585793|ref|XP_002533576.1| RNA binding protein, putative [Ricinus communis]
gi|223526553|gb|EEF28811.1| RNA binding protein, putative [Ricinus communis]
Length = 284
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 85/205 (41%), Gaps = 55/205 (26%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPK--------EDDFR 52
M K+ GS RG GF+TF + + D H + G V V ATP+ ++
Sbjct: 39 MDKETGSS--RGFGFVTFEDHSAADTAFRDQHFILGKKVDVKWATPRNPCHNSQEQNTID 96
Query: 53 PVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRI---GKKIFVGRL 109
P+ S+G E+ RI KKIFVG L
Sbjct: 97 PI--QSNGD---------------------------------ENDNRIELRTKKIFVGGL 121
Query: 110 PQEATAEDLRRYFSRFGRILDVYVPKR--TGH-RGFGFVTFAEEVVADRVSR-RSHEICG 165
P + + E+ + +FS FG + D V TG RGFGFVTF E AD V R + +++
Sbjct: 122 PHDISNEEFKDFFSTFGTVRDAVVMYNGVTGRSRGFGFVTFDSEDSADTVLRNKYYQLKD 181
Query: 166 QQVAIDSATPL---DDAGPSQNFMM 187
Q+ + A P D S N M+
Sbjct: 182 CQIEVKMAKPRSENDKQSQSHNQMV 206
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG L + + L +FS++G++ + + + K TG RGFGFVTF + AD R
Sbjct: 7 KLFVGGLNSKTDGDYLNLHFSKYGQVKETLIVMDKETGSSRGFGFVTFEDHSAADTAFRD 66
Query: 160 SHEICGQQVAIDSATPLDDAGPSQ 183
H I G++V + ATP + SQ
Sbjct: 67 QHFILGKKVDVKWATPRNPCHNSQ 90
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+T+ EE +V
Sbjct: 154 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITYKEEEPVKKVLE 213
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H + G + I A P +
Sbjct: 214 KKFHTVSGSKCEIKVAQPKE 233
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 76 AALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV-- 133
AA A T Y G ++ + GK +FVG L + + +DL+ YF++FG ++D +
Sbjct: 45 AAPPAGTQYSAEGDQINASKNEEDAGK-MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKM 103
Query: 134 -PKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQV 168
P RGFGF+ F + ++V ++ H + G+ +
Sbjct: 104 DPNTGRSRGFGFILFKDATSVEKVLDQKEHRLDGRVI 140
>gi|212276326|ref|NP_001130962.1| Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|194690564|gb|ACF79366.1| unknown [Zea mays]
gi|195616124|gb|ACG29892.1| ribonucleoprotein like protein [Zea mays]
gi|224030751|gb|ACN34451.1| unknown [Zea mays]
gi|414592149|tpg|DAA42720.1| TPA: Ribonucleoprotein like protein isoform 1 [Zea mays]
gi|414592150|tpg|DAA42721.1| TPA: Ribonucleoprotein like protein isoform 2 [Zea mays]
Length = 370
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADRVSR 158
KK+FVG L + T E+ R YF FG + DV Y RGFGFVTF E +V R
Sbjct: 137 KKVFVGGLQDDTTEEEFRAYFETFGTVTDVAVIYDSATNRSRGFGFVTFDSEEAVGKVMR 196
Query: 159 RS-HEICGQQVAIDSATPLDD 178
+S H++ G +V A P D+
Sbjct: 197 QSFHDLNGTKVEAKIAIPKDE 217
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADR--- 155
+K+FVG +P A DLR +F+RFG + V V + TGH RGFGFV F ++ A
Sbjct: 8 RKLFVGGIPAGAQEADLRAHFARFGEVRSVVVMRDRETGHGRGFGFVEFEDKAAAAAAAA 67
Query: 156 ---VSRRSHEICGQQVAIDSA 173
R H +CG+ V + A
Sbjct: 68 LGDADRPRHFLCGRAVDVKRA 88
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 22/119 (18%)
Query: 4 DQGSKAHRGIGFITFASADSVENLMVDT-HELGGSTVVVDRATPKEDD-FRPVGRMS--- 58
D + RG GF+TF S ++V +M + H+L G+ V A PK++ +R GR +
Sbjct: 171 DSATNRSRGFGFVTFDSEEAVGKVMRQSFHDLNGTKVEAKIAIPKDEQYYRNRGRGARSS 230
Query: 59 -----------------HGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRI 100
+ GYG+YN Y+ + G YG G SQ +
Sbjct: 231 GGRVPAGYEGSMYQPPYNAGYGSYNGYMPQPVHVQPYFPAPYFPVAGYPYGSGYPSQVV 289
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 122 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLE 181
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 182 KKFHTISGSKCEIKVAQPKE 201
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SR 158
K+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V +
Sbjct: 39 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 98
Query: 159 RSHEICGQQVAIDSATPL 176
+ H + G+ + A +
Sbjct: 99 KEHRLDGRVIDPKKAMAM 116
>gi|328868834|gb|EGG17212.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 697
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV----PKRTGHRGFGFVTFAEEVVADRVSR 158
KIF+G L + T+E LR+YF FG I + V K RGFGFVTF E + + +
Sbjct: 160 KIFIGGLSKLTTSEMLRKYFQSFGEINESLVIKSNEKNIKSRGFGFVTFREPDIIEEILE 219
Query: 159 RSHEICGQQVAIDSATPLDD 178
+ H I ++V I A P +D
Sbjct: 220 KEHIIDDKRVEIKRAIPKED 239
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 51/165 (30%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TF D +E ++ H + V + RA PKED
Sbjct: 201 RGFGFVTFREPDIIEEILEKEHIIDDKRVEIKRAIPKED--------------------- 239
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
+ + P +K+FVG LP+ L+ YF +FG + D
Sbjct: 240 ------------IIEEPPK------------QKLFVGGLPKNLPLLTLKEYFLQFGEVTD 275
Query: 131 ---VYVPKRTGHRGFGFVTFAEEVVADRV--SRRSHEICGQQVAI 170
+Y G +G+GF+TF +E + V ++ H I G++V +
Sbjct: 276 CKMLYEKNGVG-KGYGFITFRDETLIPVVLSDQKQHIIAGKRVDV 319
>gi|159164092|pdb|2DGS|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Daz- Associated Protein 1
Length = 99
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDV---YVPKRTGHRGFGFVTFAEEVVADR-VSR 158
KIFVG +P +LR YF +FG + +V Y ++ RGFGF+TF +E D+ V+
Sbjct: 12 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 71
Query: 159 RSHEICGQQVAIDSATPLD--DAGPS 182
H+I G++V + A P D +GPS
Sbjct: 72 HFHDIMGKKVEVKRAEPRDSKSSGPS 97
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 47/176 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GF+T++S D V M H++ G V RA +ED +P +
Sbjct: 66 KDPNTKRSRGFGFVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTT--- 122
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
KKIFVG + + LR Y
Sbjct: 123 ---------------------------------------VKKIFVGGIKDDTEENHLRDY 143
Query: 122 FSRFGRI--LDVYVPKRTGH-RGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
F +FG+I +++ V +TG+ RGF FVTF + DR V ++ H + G + A
Sbjct: 144 FDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA 199
>gi|76780030|gb|AAI06633.1| MGC52881 protein [Xenopus laevis]
Length = 346
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+TF+ + V+ M H + G V RA +E+ +P
Sbjct: 42 RDPASKRSRGFGFVTFSCMNEVDAAMSARPHTIDGRVVEPKRAVAREESAKP-------- 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+++ KK+FVG + ++ LR Y
Sbjct: 94 ----GAHVTV------------------------------KKLFVGGIKEDTEEHHLREY 119
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +G+I ++ K++G RGFGFVTF + D+ V ++ H I G + A
Sbjct: 120 FEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Query: 178 DAGPSQNFMMNAAETFG 194
+ QN N FG
Sbjct: 180 EMQDVQNTRNNRGGNFG 196
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA--EEVVADRV 156
+K+F+G L E T E LR ++ ++G++ D V P RGFGFVTF+ EV A +
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDA-AM 67
Query: 157 SRRSHEICGQQVAIDSATPLDDA 179
S R H I G+ V A +++
Sbjct: 68 SARPHTIDGRVVEPKRAVAREES 90
>gi|198435807|ref|XP_002121392.1| PREDICTED: similar to CiMsi [Ciona intestinalis]
Length = 392
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 47/179 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSV-ENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD+ + RG GFITFA+ SV E L H L + TPK
Sbjct: 43 KDKETGVSRGFGFITFANPSSVNEVLKARPHTLDNKGIDPKPCTPK-------------- 88
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
+ + A H KIF+G + EAT ED++ Y
Sbjct: 89 --------AVLQQKKATANSFTKSH----------------KIFIGGISMEATQEDVKGY 124
Query: 122 FSRFGRILDVYV------PKRTGHRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSA 173
F R+G + +V P + H+GFGFVTF +E D+ +++ H I +++ A
Sbjct: 125 FERYGTVAEVVFVLNKEDPSKP-HKGFGFVTFEDESSVDQAIAKHYHTIKDKRIEAKKA 182
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVSR- 158
KIFVG L ++ T+E ++YF FG + D + K TG RGFGF+TFA + V +
Sbjct: 11 KIFVGGLSRQTTSEGFKQYFEGFGEVTDCVLMKDKETGVSRGFGFITFANPSSVNEVLKA 70
Query: 159 RSHEICGQQVAIDSATP 175
R H + + + TP
Sbjct: 71 RPHTLDNKGIDPKPCTP 87
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + +D++ +FS+FG I++V +P + +GF F+TF +E+VV + +
Sbjct: 127 KIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 186
Query: 159 RSHEICGQQVAIDSATPLDD 178
I G++V + ATP D
Sbjct: 187 SKQTINGKEVDVKKATPKPD 206
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV 156
+K+FVG L E T ++LR +FS +G I + V P RGF F+ FA+ D++
Sbjct: 46 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 103
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 47/178 (26%)
Query: 3 KDQGSKAHRGIGFITFASADSV-ENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
KD +K RG GFIT++ + + E H++ G V RA P++D P
Sbjct: 63 KDPRTKRSRGFGFITYSHSSMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSP-------- 114
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
NA GA KK+FVG L + + LR Y
Sbjct: 115 ----NA-----------GATV-------------------KKLFVGALKDDHDEQSLRDY 140
Query: 122 FSRFGRILDVYV--PKRTG-HRGFGFVTFAEEVVADRVS-RRSHEICGQQVAIDSATP 175
FS FG I+D+ + K TG RGF FV F + D+V ++ H++ G+ V + A P
Sbjct: 141 FSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALP 198
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSR 158
+K+F+G L + E+L+ +F ++G+I+DV V P+ RGFGF+T++ + D +
Sbjct: 30 RKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 89
Query: 159 -RSHEICGQQVAIDSATPLDD 178
R H+I G+ V A P D
Sbjct: 90 ARPHKIDGRVVEPKRAVPRQD 110
>gi|14388456|dbj|BAB60767.1| hypothetical protein [Macaca fascicularis]
Length = 183
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 52 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 111
Query: 158 RRSHEICGQQVAIDSATPLD 177
++ H I G + I A P +
Sbjct: 112 KKFHTISGSKCEIKVAQPKE 131
>gi|159163285|pdb|1WF0|A Chain A, Solution Structure Of Rrm Domain In Tar Dna-Binding
Protein- 43
Length = 88
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYVPKRTGHRGFGFVTFAEEVVADRVSRRSHEI 163
+FVGR + T ++LR +FS++G ++DV++PK R F FVTFA++ +A + I
Sbjct: 8 VFVGRCTGDMTEDELREFFSQYGDVMDVFIPKP--FRAFAFVTFADDQIAQSLCGEDLII 65
Query: 164 CGQQVAIDSATPL--DDAGPS 182
G V I +A P ++GPS
Sbjct: 66 KGISVHISNAEPKHNSNSGPS 86
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILD--VYVPKRTGH-RGFGFVTFAEEVVADRVSRR 159
K+FVG + E TAE YF +FG ++D + + TG+ RGFGFVTFA+ VA++V
Sbjct: 67 KLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEE 126
Query: 160 SHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGP------MRTYGRMYGSLDFD 213
H I ++V + P D + + F G P ++ Y +YG +
Sbjct: 127 DHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGDIIEH 186
Query: 214 DWGYGMGSGRPSRG 227
Y +GR SRG
Sbjct: 187 QIMYDHHTGR-SRG 199
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 46/170 (27%)
Query: 11 RGIGFITFASADSVENLMVDTHELGGSTVVVDRATPKEDDFRPVGRMSHGGYGAYNAYIS 70
RG GF+TFA + E ++ + H + V + R P+ G + I
Sbjct: 107 RGFGFVTFADSAVAEKVLEEDHVIDDRKVDLKRTLPR---------------GDKDTDIK 151
Query: 71 AATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILD 130
A ++ +KIFVG LP ++L+ YF +G I++
Sbjct: 152 AVSK--------------------------TRKIFVGGLPPLLEEDELKNYFCVYGDIIE 185
Query: 131 --VYVPKRTGH-RGFGFVTFAEEVVADRV--SRRSHEICGQQVAIDSATP 175
+ TG RGFGFVTF E DR+ + HE+ +QV I A P
Sbjct: 186 HQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEP 235
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 11 RGIGFITFASADSVENLMVD--THELGGSTVVVDRATPK----EDDFRPVGRMSHGGYGA 64
RG GF+TF + DSV+ L D HELG V + RA PK ++ FR G + G Y
Sbjct: 198 RGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRDNSFRSYG--ASGKYDQ 255
Query: 65 YNAYISAATR 74
++Y A
Sbjct: 256 EDSYSGKANE 265
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPK--RTGH-RGFGFVTFAEEVVADRVSRR 159
KIF+G L +E T ++F ++G I D + K +TG RGFGFVT+A+ V D+V +
Sbjct: 9 KIFIGGLARETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQD 68
Query: 160 SHEICGQQVAIDSATP 175
+H I G+QV I P
Sbjct: 69 THIINGKQVEIKRTIP 84
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 57/178 (32%)
Query: 1 MPKDQGSKAHRGIGFITFASADSVENLMVDTHELGGSTVVVDRATPK----EDDFRPVGR 56
+ KD+ + RG GF+T+A V+ ++ DTH + G V + R PK DFR
Sbjct: 39 IMKDRKTGQPRGFGFVTYADPSVVDQVIQDTHIINGKQVEIKRTIPKGVVGSKDFRT--- 95
Query: 57 MSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAE 116
+KIFVG +P T +
Sbjct: 96 ---------------------------------------------RKIFVGGIPAVVTED 110
Query: 117 DLRRYFSRFGRILDVYVPK---RTGHRGFGFVTF-AEEVVADRVSR-RSHEICGQQVA 169
+ +F++FG + + + + RGFGF+TF E+ V D ++R E+ G QV+
Sbjct: 111 EFNEFFTQFGEVTEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLARGNKLELAGTQVS 168
>gi|148233568|ref|NP_001079471.1| heterogeneous nuclear ribonucleoprotein A2 homolog 2 [Xenopus
laevis]
gi|1710624|sp|P51990.1|RO22_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2;
AltName: Full=hnRNP A2(B)
gi|214743|gb|AAB59951.1| ribonucleoprotein [Xenopus laevis]
gi|27694622|gb|AAH43750.1| MGC52881 protein [Xenopus laevis]
Length = 358
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLM-VDTHELGGSTVVVDRATPKEDDFRPVGRMSHGG 61
+D SK RG GF+TF+ + V+ M H + G V RA +E+ +P
Sbjct: 42 RDPASKRSRGFGFVTFSCMNEVDAAMSARPHTIDGRVVEPKRAVAREESAKP-------- 93
Query: 62 YGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQEATAEDLRRY 121
A+++ KK+FVG + ++ LR Y
Sbjct: 94 ----GAHVTV------------------------------KKLFVGGIKEDTEEHHLREY 119
Query: 122 FSRFGRI--LDVYVPKRTG-HRGFGFVTFAEEVVADR-VSRRSHEICGQQVAIDSATPLD 177
F +G+I ++ K++G RGFGFVTF + D+ V ++ H I G + A
Sbjct: 120 FEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQ 179
Query: 178 DAGPSQNFMMNAAETFG 194
+ QN N FG
Sbjct: 180 EMQDVQNTRNNRGGNFG 196
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA--EEVVADRV 156
+K+F+G L E T E LR ++ ++G++ D V P RGFGFVTF+ EV A +
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDA-AM 67
Query: 157 SRRSHEICGQQVAIDSATPLDDA 179
S R H I G+ V A +++
Sbjct: 68 SARPHTIDGRVVEPKRAVAREES 90
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-S 157
KKIFVG L EAT E +R YF FG I + + PK RGF F+TF EE +V
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 158 RRSHEICGQQVAIDSATP 175
++ H + G + I A P
Sbjct: 143 KKFHTVSGSKCEIKVAQP 160
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 104 IFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRV-SRR 159
+FVG L + + +DL+ YF++FG ++D + P RGFGF+ F + ++V ++
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 160 SHEICGQQVAIDSATPL 176
H + G+ + A +
Sbjct: 61 EHRLDGRVIDPKKAMAM 77
>gi|242024531|ref|XP_002432681.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518151|gb|EEB19943.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 295
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 103 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVP---KRTGHRGFGFVTF-AEEVVADRVSR 158
KIFVG L E + ED+R +F +FG IL+V +P ++ + F F+TF +E+V D + +
Sbjct: 114 KIFVGGLDVETSEEDIRNFFGQFGTILEVELPFDKQKNQQKNFCFITFESEQVTNDLLKQ 173
Query: 159 RSHEICGQQVAIDSATP 175
I G++V + A P
Sbjct: 174 PKQTINGKEVDVKKANP 190
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 92 GRGESSQRIGKKIFVGRLPQEATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFA 148
G ES+ +K+FVGRL E T ++LR +FS+FG I V V P RGF F+ F
Sbjct: 23 GTTESTNNDDRKLFVGRLSWETTDKELREHFSQFGEIESVSVKTDPASGRSRGFAFIVFK 82
Query: 149 EEVVADRV 156
+ ++V
Sbjct: 83 DVESIEKV 90
>gi|414883456|tpg|DAA59470.1| TPA: hypothetical protein ZEAMMB73_595283 [Zea mays]
gi|414883457|tpg|DAA59471.1| TPA: hypothetical protein ZEAMMB73_595283 [Zea mays]
gi|414883458|tpg|DAA59472.1| TPA: hypothetical protein ZEAMMB73_595283 [Zea mays]
Length = 374
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 76/190 (40%), Gaps = 29/190 (15%)
Query: 3 KDQGSKAHRGIGFITFASADSVENLMVD----THELGGSTVVVDRATPK------EDDFR 52
+D+ + RG GF+ F + + D H L G V V RA + E +
Sbjct: 47 RDRETGHGRGFGFVEFEEEAAAGTALGDGEKLKHFLCGRMVDVKRARTRAPRNQGEQHSQ 106
Query: 53 PVGRMSHGGYGAYNAYISAATRYAALGAPTLYDHPGSFYGRGESSQRIGKKIFVGRLPQE 112
P G G + A A G YD KK+F+G L
Sbjct: 107 PQQAEQGRGQGNQDNQSPAGNGTADCGNSVSYDS---------------KKVFIGGLRDN 151
Query: 113 ATAEDLRRYFSRFGRILDVYV---PKRTGHRGFGFVTFAEEVVADRVSRRS-HEICGQQV 168
T ++ R YF FG + DV V + RGFGFVTF E +V R+S H++ G +V
Sbjct: 152 ITEKEFRAYFETFGTVTDVVVIYDSATSRSRGFGFVTFDSEEAVGKVMRQSFHDLNGTKV 211
Query: 169 AIDSATPLDD 178
A P D+
Sbjct: 212 EAKIAIPKDE 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 102 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYV--PKRTGH-RGFGFVTFAEEVVADRV-- 156
+K+FVG +P A +LR +FSRFG + V V + TGH RGFGFV F EE A
Sbjct: 14 RKLFVGGIPAGAQEPELRAHFSRFGEVRSVIVMRDRETGHGRGFGFVEFEEEAAAGTALG 73
Query: 157 --SRRSHEICGQQVAIDSA 173
+ H +CG+ V + A
Sbjct: 74 DGEKLKHFLCGRMVDVKRA 92
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,136,521,329
Number of Sequences: 23463169
Number of extensions: 183502586
Number of successful extensions: 430682
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 10663
Number of HSP's that attempted gapping in prelim test: 407574
Number of HSP's gapped (non-prelim): 27305
length of query: 234
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 96
effective length of database: 9,121,278,045
effective search space: 875642692320
effective search space used: 875642692320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)