Query 026728
Match_columns 234
No_of_seqs 151 out of 235
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 20:41:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026728.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026728hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kr0_A Proteasomal ubiquitin r 100.0 1.2E-60 4E-65 447.7 23.4 222 11-233 22-322 (411)
2 2r2y_A Protein ADRM1; proteaso 100.0 4.9E-51 1.7E-55 338.1 14.8 115 10-124 20-135 (153)
3 4b4t_X 26S proteasome regulato 100.0 1.7E-46 5.8E-51 312.2 10.7 112 12-124 3-133 (156)
4 2kqz_A Proteasomal ubiquitin r 99.2 5.6E-12 1.9E-16 104.5 2.0 61 172-233 6-66 (155)
5 3pp2_A RHO GTPase-activating p 69.8 6.2 0.00021 29.7 4.7 54 66-121 69-123 (124)
6 2dn6_A KIAA0640 protein; PH do 66.2 20 0.00068 25.5 6.7 55 65-123 49-105 (115)
7 2ec1_A Nucleoporin 50 kDa; ran 64.6 46 0.0016 25.6 9.5 113 3-119 2-122 (125)
8 1x1g_A Pleckstrin 2; PH domain 57.6 51 0.0017 23.8 8.3 39 85-124 89-127 (129)
9 1klf_A FIMC chaperone, chapero 55.5 78 0.0027 26.2 9.4 73 25-101 3-85 (205)
10 1upq_A PEPP1; PH domain, phosp 50.7 45 0.0015 23.8 6.4 50 73-123 60-111 (123)
11 2kzb_A Autophagy-related prote 49.6 15 0.00051 28.1 3.5 53 30-90 4-58 (118)
12 2xg5_A PAPD, chaperone protein 46.6 1.3E+02 0.0043 25.1 10.0 73 25-101 3-88 (218)
13 2p0d_A RHO GTPase-activating p 44.8 90 0.0031 23.2 7.5 49 72-123 76-126 (129)
14 1dro_A Beta-spectrin; cytoskel 39.8 26 0.00089 25.7 3.6 40 83-123 82-121 (122)
15 2dkp_A Pleckstrin homology dom 36.9 83 0.0028 22.5 6.0 49 72-121 69-119 (128)
16 3cxb_B Pleckstrin homology dom 35.7 75 0.0026 23.0 5.6 38 84-124 67-104 (112)
17 4djm_A DRAB; chaperone, PILI; 32.8 2.3E+02 0.0077 24.0 9.2 78 20-101 20-105 (239)
18 1pls_A Pleckstrin homology dom 32.3 80 0.0028 22.2 5.2 36 85-123 68-103 (113)
19 4ay0_A Chaperone protein CAF1M 30.1 2.4E+02 0.0082 23.5 10.3 76 21-101 12-97 (218)
20 3q6k_A 43.2 kDa salivary prote 29.4 33 0.0011 31.4 3.1 52 33-89 282-341 (381)
21 2aj7_A Hypothetical protein BH 28.8 52 0.0018 26.7 3.9 38 63-106 28-66 (163)
22 1wjm_A Beta-spectrin III; PH d 27.9 61 0.0021 23.4 3.9 37 85-124 84-120 (123)
23 2co7_B SAFB chaperone, putativ 27.9 2.6E+02 0.0089 23.2 10.0 76 21-101 12-95 (221)
24 4h8s_A DCC-interacting protein 27.7 1.5E+02 0.0051 26.4 7.2 51 72-123 350-400 (407)
25 1u5d_A SKAP55, SRC kinase-asso 26.3 1.5E+02 0.0053 20.0 7.1 36 84-122 71-106 (108)
26 2a1k_A GP32 single stranded DN 24.9 73 0.0025 27.5 4.2 24 81-122 110-133 (233)
27 1l4i_A SFAE protein; periplasm 24.0 3E+02 0.01 22.5 9.5 73 25-101 3-85 (206)
28 1v89_A Hypothetical protein KI 22.8 1.9E+02 0.0066 19.9 7.1 53 72-124 55-115 (118)
29 1uww_A Endoglucanase; carbohyd 22.0 1.1E+02 0.0036 25.4 4.5 41 46-91 139-189 (191)
30 4go6_A HCF N-terminal chain 1; 21.6 97 0.0033 20.1 3.3 25 35-59 8-32 (45)
31 1v5u_A SBF1, SET binding facto 21.5 1.7E+02 0.0058 20.3 5.2 37 84-124 78-114 (117)
32 2kzk_A Uncharacterized protein 21.2 70 0.0024 23.9 3.0 37 46-90 16-52 (107)
33 2d9y_A Pleckstrin homology dom 20.6 2.2E+02 0.0075 19.7 7.5 51 72-123 59-111 (117)
34 2yry_A Pleckstrin homology dom 20.2 2.3E+02 0.0079 19.8 6.3 23 99-121 98-120 (122)
35 1eaz_A Tandem PH domain contai 20.1 1.7E+02 0.0057 20.6 5.0 37 83-123 77-113 (125)
No 1
>2kr0_A Proteasomal ubiquitin receptor ADRM1; proteasome, 19S regulator, protein binding; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-60 Score=447.72 Aligned_cols=222 Identities=35% Similarity=0.648 Sum_probs=167.3
Q ss_pred CCCceeEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCCCCcccceEeeCCceEEEEecc-CCCeEEEEE
Q 026728 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILK 89 (234)
Q Consensus 11 ~~~~~li~FkAGk~~~~g~~V~pd~rKG~l~l~~~~d~l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~-~tGRVyvLk 89 (234)
.+.++||+||||||+++|++|+||+|||+|||++.+|+|+||||++|+++.+|||+||||+|++|+||++ |||||||||
T Consensus 22 s~~~~lveFkAGk~~~~g~~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~~~~~Eddlii~P~d~~f~~V~~c~tGRVyvLk 101 (411)
T 2kr0_A 22 ASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLK 101 (411)
T ss_dssp SCCSCSEEECEEEEEESSSSEEECCSCEEEEEEECTTSCEEEEEEESSSCCEEEEEEECTTSEEEEECTTCSSSCEEEEE
T ss_pred CCCceeEEEeCceEEecCCEEeecCCCcEEEEEeCCCCcEEEEEecCCCCCcccceEEcCCceEEEECCCCCCCeEEEEE
Confidence 4569999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCcccc---cccc---c------ccCCC--------cccccccc----
Q 026728 90 FNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLVFV---NEEE---L------DASVP--------LQVSEDMV---- 145 (234)
Q Consensus 90 F~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~~~~~---~~~~---~------~~~~~--------~~~~~~~~---- 145 (234)
|+++++||||||||++.++|+++|++||++|+++++.. +.+. + ..++. .+++....
T Consensus 102 F~ss~~r~fFWmQe~~~~~D~~~~~~vN~ll~~~~~~~~~~~~gs~~~~~~~~g~e~dl~~~~~~~sq~qlmql~g~~g~ 181 (411)
T 2kr0_A 102 FKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGL 181 (411)
T ss_dssp ETTTCCEEEEEECCSCGGGHHHHHHHHHHHHHSCSCCSCSCCCSSCCCCSSCCCSCCCSCSCSSCCCSCCSSCCCCSSCC
T ss_pred ecCCCceeEEEecCCCcccHHHHHHHHHHHHhCCcccccccccCccccccccccccchhhhccccccHHHHHHhhhcccc
Confidence 99999999999999999999999999999999987421 0000 0 00000 01111100
Q ss_pred -------------------cCCcccCC-------CCC--------CCCCC-C------------------CC-CCCCCCC
Q 026728 146 -------------------EDDVSSRA-------GNL--------VVPNL-G------------------GE-AISDVTS 171 (234)
Q Consensus 146 -------------------~~~~ss~~-------~~~--------~~~~~-~------------------~~-~~~~~~~ 171 (234)
.....+++ ..+ ..+.+ . .. +.+..++
T Consensus 182 ~~~~gl~~~~gp~~~~~~~s~~~~~~~~s~~~~~~~~~~tp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (411)
T 2kr0_A 182 GGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAAS 261 (411)
T ss_dssp CSTTCSCCCCCCSTTTTTCSCCCCSSSCCCCSCCCCCCCCTTSCCCCCCSCCCCCCCSSCCCSSCCCCSCCSSSSSTTTS
T ss_pred ccccccccccCcccccccccCCCccccccccccccccccccccccccccccccccccccccccccccccccccCCccccc
Confidence 00000000 000 00000 0 00 0001122
Q ss_pred CCCCccHHHHHHHHhhcCCCCCCCCCCCCCCccccCCcCcchhhhcCcchHHhhccCCCCCC
Q 026728 172 SSGPVKLEDLQRIFSNIGPADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYLPERS 233 (234)
Q Consensus 172 ~~~~~~l~~lq~iLs~lg~~~~~~~~~~~~~L~dvLtpe~l~pll~~~~~~~~L~~~LP~~~ 233 (234)
+.+++++++||+||++|+.....+ ..++++|+|||+|++|.|||+|++++++|++|||+++
T Consensus 262 ~~~~i~l~dLq~iLasl~~~~~~~-~~~~v~L~dvLt~e~l~pll~d~e~~erL~~~LP~~~ 322 (411)
T 2kr0_A 262 PTQPIQLSDLQSILATMNVPAGPA-GGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGE 322 (411)
T ss_dssp CCCCSSHHHHHHHHHHHTSSSCTT-CSHHHHGGGTSCHHHHHHHHTSHHHHHHHGGGCCSSC
T ss_pred cCCcccHHHHHHHHHhhccccccc-cCCCCCHHHhhCHHHHHHHhcCHHHHHHHHhhCCCCc
Confidence 345789999999999997432221 3568999999999999999999999999999999975
No 2
>2r2y_A Protein ADRM1; proteasome, ubiquitin, PH-domain, 19S regulator, receptor, U proteasome-degradation pathway; 1.70A {Mus musculus} PDB: 2z59_A
Probab=100.00 E-value=4.9e-51 Score=338.10 Aligned_cols=115 Identities=50% Similarity=0.931 Sum_probs=106.9
Q ss_pred CCCCceeEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCCCCcccceEeeCCceEEEEecc-CCCeEEEE
Q 026728 10 PAMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYIL 88 (234)
Q Consensus 10 ~~~~~~li~FkAGk~~~~g~~V~pd~rKG~l~l~~~~d~l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~-~tGRVyvL 88 (234)
..+.++||+||||||+++|++|+||+|||+|||++.+|+|+||||++|+++.+|||+||||+|++|++|++ +|||||+|
T Consensus 20 ~~~~~~lveFkAGkm~l~g~~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~t~~vEdDlIi~P~d~~F~kV~~c~tGRVyvL 99 (153)
T 2r2y_A 20 GSSTKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPDDCEFKRVPQCPSGRVYVL 99 (153)
T ss_dssp -----CCEEEEEEEEEEETTEEEECCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECCTTSEEEEECTTCTTSCEEEE
T ss_pred ccCCceeEEEeCceEEecCCEEeECCCCEEEEEEECCCCcEEEEEecCCCCCccceEEEcCCCeEEEECCCCCCCeEEEE
Confidence 36679999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred EEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 026728 89 KFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (234)
Q Consensus 89 kF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~~ 124 (234)
||+++++||||||||++.++|+++|++||++||+|+
T Consensus 100 kF~ss~~r~FFWmQe~~~~~D~~~~~kvN~lL~~p~ 135 (153)
T 2r2y_A 100 KFKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNPP 135 (153)
T ss_dssp EETTTCCEEEEEECSSSSTTHHHHHHHHHHHHHC--
T ss_pred EecCCCceEEEEecCCCcccHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999986
No 3
>4b4t_X 26S proteasome regulatory subunit RPN13; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} PDB: 2z4d_A
Probab=100.00 E-value=1.7e-46 Score=312.23 Aligned_cols=112 Identities=25% Similarity=0.567 Sum_probs=99.4
Q ss_pred CCceeEEEeceeeEecC--CceeecCCCcEEEEEeCCC---CceEEEEeeCCCCCc----ccceEeeCCceEEEEecc-C
Q 026728 12 MQEILLEFRAGKMTFDG--KKVVPDSRKGLVRIARGEH---GLIHFQWLDRTRNVV----EDDQIVFPHEAVFEKVNQ-A 81 (234)
Q Consensus 12 ~~~~li~FkAGk~~~~g--~~V~pd~rKG~l~l~~~~d---~l~hf~W~~R~~~~~----Edd~ii~Pgd~~f~~V~~-~ 81 (234)
+..+||+||||||.+++ ++|+|++|||+|||++++| +|+||||++|+++.. |+|+||||||++|++|++ +
T Consensus 3 ~s~~li~FkAGk~~~~~~tk~v~Pd~rKG~i~l~~~~d~~~~l~hf~W~~R~~~~~~~~~~~dlii~P~d~~f~~v~~c~ 82 (156)
T 4b4t_X 3 MSSTVIKFRAGVCEYNEDSRLCTPIPVQGEIEIKPNEEEELGFWDFEWRPTEKPVGRELDPISLILIPGETMWVPIKSSK 82 (156)
T ss_dssp ----CEEECEEEEEEETTTTEEEECSCCCBEEEESCSSSSSCCCEEECBSCSCCSSCCCCCCEECCCTTTSEEECCSSCS
T ss_pred CCceeEEEeCceEEEcCCccEEeecCCceEEEEEECCCCCcceEEEEEecCCCCCcCCCCccceEEcCCceEEEEcCCCC
Confidence 45789999999999986 6899999999999999877 699999999997653 459999999999999999 9
Q ss_pred CCeEEEEEEcCCCceeEEEccCCCc---------hhhHHHHHHHHHHhcCCc
Q 026728 82 SGRVYILKFNTDDRKFFLWMQEPKA---------EEDSQLCNSVNYFINRPL 124 (234)
Q Consensus 82 tGRVyvLkF~ss~~r~fFWmQe~~~---------~~D~~~~~kin~~l~~~~ 124 (234)
|||||+||| +|+|||||||||+++ ++|.++|++||++||++.
T Consensus 83 tGRVyvLkF-ss~~r~fFWmQe~~~~~~~~~~~s~kD~~~~~~vn~lL~~~~ 133 (156)
T 4b4t_X 83 SGRIFALVF-SSNERYFFWLQEKNSGNLPLNELSAKDKEIYNKMIGVLNNSS 133 (156)
T ss_dssp SCCEEEEEC-SSSCCEEEEECSSCSSSSSSCCCSSSSHHHHHHHHHHHHCC-
T ss_pred CcEEEEEEe-cCCCcEEEEeecCCccCCcccccchhHHHHHHHHHHHhcCCc
Confidence 999999999 678999999999986 679999999999999986
No 4
>2kqz_A Proteasomal ubiquitin receptor ADRM1; proteasome, UCH37-binding domain, protein binding; NMR {Homo sapiens} PDB: 2l5v_A
Probab=99.17 E-value=5.6e-12 Score=104.49 Aligned_cols=61 Identities=26% Similarity=0.597 Sum_probs=52.4
Q ss_pred CCCCccHHHHHHHHhhcCCCCCCCCCCCCCCccccCCcCcchhhhcCcchHHhhccCCCCCC
Q 026728 172 SSGPVKLEDLQRIFSNIGPADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYLPERS 233 (234)
Q Consensus 172 ~~~~~~l~~lq~iLs~lg~~~~~~~~~~~~~L~dvLtpe~l~pll~~~~~~~~L~~~LP~~~ 233 (234)
+++++++++||+||++|+..+..+ .+++++|+|||+|++|.|||+|++++++|++||||++
T Consensus 6 ~~~~i~l~~lq~il~sl~~~~~~~-~~~~~~L~dvLt~e~l~~ll~d~~~~~~L~~~LP~~~ 66 (155)
T 2kqz_A 6 PTQPIQLSDLQSILATMNVPAGPA-GGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGE 66 (155)
T ss_dssp SCCCCSTTHHHHHHHHTCCCCCCC-SSSHHHHHHHTCTTTSHHHHHSHHHHHHHHHHSCSSC
T ss_pred CCCCccHHHHHHHHHHhccccccC-CCCCCCHHHHhCHHHHHHHHcCHHHHHHHHhhCCCCC
Confidence 356799999999999997433222 4678999999999999999999999999999999986
No 5
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=69.79 E-value=6.2 Score=29.68 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=33.4
Q ss_pred eEeeCCceEEEEec-cCCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhc
Q 026728 66 QIVFPHEAVFEKVN-QASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFIN 121 (234)
Q Consensus 66 ~ii~Pgd~~f~~V~-~~tGRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~ 121 (234)
.|-+.+ +...... ..+.|=++++....+.+.|+ +|-.+.+.-.+|+..|+..|.
T Consensus 69 ~i~L~~-a~v~~~~~d~~krk~vF~l~t~~~~~yl-fqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 69 TVELRG-ATLSWAPKDKSSRKNVLELRSRDGSEYL-IQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp EEECTT-CEEEECCGGGCSSSSEEEEECTTSCEEE-EECSCHHHHHHHHHHHHHHHC
T ss_pred eEEcCC-CEEEecccccCCCceEEEEECCCCCEEE-EECCCHHHHHHHHHHHHHHHh
Confidence 333333 5556653 33344445554444444433 898888888899999999885
No 6
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.22 E-value=20 Score=25.45 Aligned_cols=55 Identities=11% Similarity=0.295 Sum_probs=34.1
Q ss_pred ceEeeCCceEEEEeccCCCe--EEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 65 DQIVFPHEAVFEKVNQASGR--VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 65 d~ii~Pgd~~f~~V~~~tGR--VyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
..|-+.+.+....++..+++ +|.|.. .++. |.|+-.+.+.=.+|+..|+.++...
T Consensus 49 g~i~L~~~~~v~~~~~~~~~~~~F~i~~--~~r~--~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 49 GDILLDENCCVESLPDKDGKKCLFLVKC--FDKT--FEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp EEECCCTTCEEEEECCCTTCCSEEEEEC--SSCE--EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cEEEecCcEEEEECCCCCCCeeEEEEEe--CCCE--EEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 34444454555556544454 555543 3444 4457777777779999999998754
No 7
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.62 E-value=46 Score=25.57 Aligned_cols=113 Identities=9% Similarity=0.111 Sum_probs=61.4
Q ss_pred CCCCCcCCCCCceeEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCC-CCcccceEeeCCceEEEEeccC
Q 026728 3 SSSTAASPAMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTR-NVVEDDQIVFPHEAVFEKVNQA 81 (234)
Q Consensus 3 ~~~~~~~~~~~~~li~FkAGk~~~~g~~V~pd~rKG~l~l~~~~d~l~hf~W~~R~~-~~~Edd~ii~Pgd~~f~~V~~~ 81 (234)
||-...-.-....|++.||=...++++. =-+..-|.|+|.+..++-.++.=|...+ +.+=...+|.|+ ..+++..
T Consensus 2 ~s~~~tgEE~E~~lf~~raKLf~~~~~~-WkERGvG~lki~~~k~~k~RllmR~d~~~~kv~lN~~i~~~-m~~~~~g-- 77 (125)
T 2ec1_A 2 SSGSSGEVKEEDAFYSKKCKLFYKKDNE-FKEKGIGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPN-MPCTRTG-- 77 (125)
T ss_dssp ------CCCCCSCSEEEEEEEEEECSSS-EEEEEEEEEEEEECSSSSEEEEEEESSSSCCBSCCEECCSS-CCEECCT--
T ss_pred CCCCcCCccCceeEEEEeeEEEEecCCC-cccccEEEEEeeecCCCcEEEEEEecCCCCEEEEeeEEcCC-CeEEecC--
Confidence 3333333445677888888444444321 2233457888877667777766666544 677788888876 5565542
Q ss_pred CCeEEEEEEcC---CCc----eeEEEccCCCchhhHHHHHHHHHH
Q 026728 82 SGRVYILKFNT---DDR----KFFLWMQEPKAEEDSQLCNSVNYF 119 (234)
Q Consensus 82 tGRVyvLkF~s---s~~----r~fFWmQe~~~~~D~~~~~kin~~ 119 (234)
..++.++-... ++. ..-|=+.=++.+.-.++...|++.
T Consensus 78 ~~~~~~~~~~~~~~d~~~~~~~~~~~lrfk~~e~a~~f~~~~~e~ 122 (125)
T 2ec1_A 78 KNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEK 122 (125)
T ss_dssp TTEEEEEECCSSCSCSSSSSSCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCcccCCCCCceEEEEEEECCHHHHHHHHHHHHHh
Confidence 23444443321 111 334445555665556777777654
No 8
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=57.64 E-value=51 Score=23.83 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=26.3
Q ss_pred EEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 026728 85 VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (234)
Q Consensus 85 VyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~~ 124 (234)
-|+++....+++ -|.|+-.+.+.=.+|+..|+.+++.+.
T Consensus 89 ~~~F~I~~~~~r-~~~l~a~s~~e~~~Wi~al~~~~~~~~ 127 (129)
T 1x1g_A 89 GNLFKVITKDDT-HYYIQASSKAERAEWIEAIKKLTSGPS 127 (129)
T ss_dssp SSCEEECCTTCC-CEEECCSSHHHHHHHHHHHHHHSSSSC
T ss_pred CceEEEEcCCCC-EEEEEcCCHHHHHHHHHHHHHHHhccc
Confidence 344444334434 244787777777799999999998764
No 9
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=55.47 E-value=78 Score=26.16 Aligned_cols=73 Identities=16% Similarity=0.389 Sum_probs=44.5
Q ss_pred EecCCceeecC--CCcEEEEEeCCCC---ceEEEEeeCCCCCcccceEeeCCceEEEEeccCCCeEEEEEE-cC----CC
Q 026728 25 TFDGKKVVPDS--RKGLVRIARGEHG---LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKF-NT----DD 94 (234)
Q Consensus 25 ~~~g~~V~pd~--rKG~l~l~~~~d~---l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~~tGRVyvLkF-~s----s~ 94 (234)
.+++++|.=.. +-..|.|...++. |++ .|.+...+.....||+.|- +.|++...+.+..+.+ .. .+
T Consensus 3 ~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQ-sWi~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~lP~D 78 (205)
T 1klf_A 3 ALGATRVIYPAGQKQVQLAVTNNDENSTYLIQ-SWVENADGVKDGRFIVTPP---LFAMKGKKENTLRILDATNNQLPQD 78 (205)
T ss_dssp EESCSEEEEETTCSEEEEEEEECCSSCCEEEE-EEEEETTSCCCSSEEEESS---EEEECSSEEEEEEEEECSCSCSCSS
T ss_pred EecceEEEEeCCCcEEEEEEEcCCCCCcEEEE-EEEecCCCCccCCEEEcCC---eEEECCCCceEEEEEecCCCCCCCC
Confidence 46676653333 3445666555454 565 4987655445678999998 7788874444444444 32 25
Q ss_pred ceeEEEc
Q 026728 95 RKFFLWM 101 (234)
Q Consensus 95 ~r~fFWm 101 (234)
+-..||+
T Consensus 79 rEslf~l 85 (205)
T 1klf_A 79 RESLFWM 85 (205)
T ss_dssp SCEEEEE
T ss_pred ceEEEEE
Confidence 6689996
No 10
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=50.70 E-value=45 Score=23.84 Aligned_cols=50 Identities=6% Similarity=0.038 Sum_probs=32.2
Q ss_pred eEEEEecc--CCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 73 AVFEKVNQ--ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 73 ~~f~~V~~--~tGRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
++...+.. ..++-|+++....+.+.| .|+-.+.+.=.+|+..|+.++...
T Consensus 60 ~~v~~~~~~~~~~~~~~f~i~~~~~r~~-~l~a~s~~e~~~Wi~al~~a~~~~ 111 (123)
T 1upq_A 60 YNIRPDGPGAPRGRRFTFTAEHPGMRTY-VLAADTLEDLRGWLRALGRASRAE 111 (123)
T ss_dssp CEEEECCSSCTTSSSSEEEEECTTSCCE-EEECSSHHHHHHHHHHHHHHHC--
T ss_pred CEEEECCCCccCCCcEEEEEECCCCeEE-EEECCCHHHHHHHHHHHHHHHhcc
Confidence 45555543 456777777655543333 377777777779999999999754
No 11
>2kzb_A Autophagy-related protein 19; selective autophagy, ATG19, alpha-mannosidase, protein trans; NMR {Saccharomyces cerevisiae}
Probab=49.63 E-value=15 Score=28.12 Aligned_cols=53 Identities=15% Similarity=0.244 Sum_probs=32.5
Q ss_pred ceeecC-CCcEEEEEeCCCCceEEEEeeCCCCCcccceEeeCCceEEEEecc-CCCeEEEEEE
Q 026728 30 KVVPDS-RKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILKF 90 (234)
Q Consensus 30 ~V~pd~-rKG~l~l~~~~d~l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~-~tGRVyvLkF 90 (234)
+|+|-. +-=.|.+.+ .|.++||+-.+.+. +++||+|+|+--.. .---|+..|.
T Consensus 4 ~~~~pn~~sL~Itvs~-rDnsL~F~lyNntn-------~~lpGnCtl~fs~~g~~ptv~si~m 58 (118)
T 2kzb_A 4 MVEPPNERSLQITMNQ-RDNSLYFQLFNNTN-------SVLAGNCKLKFTDAGDKPTTQIIDM 58 (118)
T ss_dssp -CCCSSCCCEEEEEEE-ETTEEEEEEEECSS-------SCCCSSCEECCCSSSSSCCCCCEEC
T ss_pred cccCCCCccEEEEEec-CCCeEEEEEecCCc-------eeccCccEEEEecCCCCceEEEEec
Confidence 444333 433455555 68899999998665 56899999977543 1123555543
No 12
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=46.61 E-value=1.3e+02 Score=25.10 Aligned_cols=73 Identities=15% Similarity=0.363 Sum_probs=43.7
Q ss_pred EecCCceeecC--CCcEEEEEeCCCC---ceEEEEeeCCCCC-c-ccceEeeCCceEEEEeccCCCeEEEEEEcC-----
Q 026728 25 TFDGKKVVPDS--RKGLVRIARGEHG---LIHFQWLDRTRNV-V-EDDQIVFPHEAVFEKVNQASGRVYILKFNT----- 92 (234)
Q Consensus 25 ~~~g~~V~pd~--rKG~l~l~~~~d~---l~hf~W~~R~~~~-~-Edd~ii~Pgd~~f~~V~~~tGRVyvLkF~s----- 92 (234)
.+++++|.=.. +-..|.|...++. |++ .|.+...+. . ...||+.|- +.|++...+.+..+.+..
T Consensus 3 ~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQ-sWi~~~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~~l 78 (218)
T 2xg5_A 3 SLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQ-AWIENENQEKIITGPVIATPP---VQRLEPGAKSMVRLSTTPDISKL 78 (218)
T ss_dssp EESCSEEEEETTSSEEEEEEEECCSSSCEEEE-EEEECTTSCEECSSSEEEECS---EEEECTTCEEEEEEEECGGGGGS
T ss_pred EeCceEEEEeCCCCEEEEEEEcCCCCCcEEEE-EEEecCCCCccccCCEEEcCC---eEEECCCCceEEEEEecCCCCCC
Confidence 45676653333 3445566554444 555 498764432 2 457999998 778887445555555543
Q ss_pred -CCceeEEEc
Q 026728 93 -DDRKFFLWM 101 (234)
Q Consensus 93 -s~~r~fFWm 101 (234)
.++-..||+
T Consensus 79 P~DrESlf~l 88 (218)
T 2xg5_A 79 PQDRESLFYF 88 (218)
T ss_dssp CSSSCEEEEE
T ss_pred CCCceEEEEE
Confidence 356789996
No 13
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=44.81 E-value=90 Score=23.17 Aligned_cols=49 Identities=20% Similarity=0.186 Sum_probs=31.1
Q ss_pred ceEEEEeccCCCe--EEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 72 EAVFEKVNQASGR--VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 72 d~~f~~V~~~tGR--VyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
.+........+.| ||.|+. .+.+.|| ||-.+.+.-.+|+..|+..|...
T Consensus 76 ~~~v~~~~~~~kr~~~F~l~t--~~~~~yl-~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 76 GAALAHGRHLSSRRNVLHIRT--IPGHEFL-LQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp TCEEEECTTSCSSSSEEEEEC--TTSCEEE-EECSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCcEEEEEc--CCCCEEE-EECCCHHHHHHHHHHHHHHHHhc
Confidence 3444443333445 666653 3433333 89988888889999999998753
No 14
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=39.81 E-value=26 Score=25.68 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=26.4
Q ss_pred CeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 83 GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 83 GRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
.|-|+++....+.+. |-+|-.+.+.=.+|+..||..|+.+
T Consensus 82 kr~~~F~l~t~~~~~-~lfqA~s~~e~~~Wi~ai~~~i~~~ 121 (122)
T 1dro_A 82 KKKHVLRVKLANGAL-FLLQAHDDTEMSQWVTSLKAQSDST 121 (122)
T ss_dssp SSTTEEEEECSSSCE-EEEECSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCeEEEEEEcCCCE-EEEECCCHHHHHHHHHHHHHHHHhc
Confidence 444444443333332 2379888888889999999999764
No 15
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=36.86 E-value=83 Score=22.53 Aligned_cols=49 Identities=8% Similarity=0.014 Sum_probs=30.1
Q ss_pred ceEEEEecc--CCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhc
Q 026728 72 EAVFEKVNQ--ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFIN 121 (234)
Q Consensus 72 d~~f~~V~~--~tGRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~ 121 (234)
.++...+.. ..+|-|+++....+.+. |.|+-.+.+.=.+|+..|+.++.
T Consensus 69 ~~~v~~~~~~~~~~~~~~F~i~~~~~r~-~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 69 SFQIALLTSEDHINRKYAFKAAHPNMRT-YYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp GSEEEECCGGGCCSSCSEEEEECSSSCC-EEEECSSHHHHHHHHHHHHHHHS
T ss_pred ceEEEEcCCcccCCCCeEEEEEcCCCCE-EEEEcCCHHHHHHHHHHHHHHHh
Confidence 455555543 33555555554444333 34777777777799999988775
No 16
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=35.70 E-value=75 Score=22.95 Aligned_cols=38 Identities=5% Similarity=0.107 Sum_probs=28.5
Q ss_pred eEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 026728 84 RVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (234)
Q Consensus 84 RVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~~ 124 (234)
.||.|++.+ .+ -|.+|-.+.+.-.+|+..|+..+....
T Consensus 67 ~~F~l~~~~-~~--~y~f~A~s~ee~~~Wi~ai~~~~~~~~ 104 (112)
T 3cxb_B 67 HAFQVILSD-RP--CLELSAESEAEMAEWMQHLCQAVSKGV 104 (112)
T ss_dssp TEEEEEETT-SC--CEEEECSSHHHHHHHHHHHHHHHTCC-
T ss_pred eEEEEEcCC-CC--EEEEEcCCHHHHHHHHHHHHHHhhccc
Confidence 488887742 22 355899998888899999999998754
No 17
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=32.80 E-value=2.3e+02 Score=24.00 Aligned_cols=78 Identities=12% Similarity=0.176 Sum_probs=44.8
Q ss_pred eceeeEecCCceeec-C-CCcEEEEEeCCCC--ceEEEEeeCCCCCcccceEeeCCceEEEEeccCCCeEEEEEEcC---
Q 026728 20 RAGKMTFDGKKVVPD-S-RKGLVRIARGEHG--LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKFNT--- 92 (234)
Q Consensus 20 kAGk~~~~g~~V~pd-~-rKG~l~l~~~~d~--l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~~tGRVyvLkF~s--- 92 (234)
+|.=+.+++++|.=. . +-..|.|...++. |++ .|.+.........||+.|- +.|++...+.+..+.+..
T Consensus 20 ~aa~v~l~~TRvIy~~~~k~~sl~l~N~~~~P~LvQ-sWv~~~~~~~~~pfivtPP---lfRlep~~~q~lRIi~~~~~L 95 (239)
T 4djm_A 20 RVFSLHLGATRVVYNPASSGETLTVINDQDYPMLVQ-SEVLSEDQKSPAPFVVTPP---LFRLDGQQSSRLRIVRTGGEF 95 (239)
T ss_dssp CEECCEESCSEEEECTTSSCEEEEEEECSSSCEEEE-EEEECTTSSSBCSEEEESS---EEEECTTEEEEEEEEECSCCC
T ss_pred eEEeEEEcceEEEEeCCCCEEEEEEEeCCCCcEEEE-EEEEcCCCCccCCEEEcCC---eEEECCCCceEEEEEECCCCC
Confidence 344456788775433 3 3345566554332 444 4987654434567999998 778876333333333332
Q ss_pred -CCceeEEEc
Q 026728 93 -DDRKFFLWM 101 (234)
Q Consensus 93 -s~~r~fFWm 101 (234)
.++-..|||
T Consensus 96 P~DRESlf~l 105 (239)
T 4djm_A 96 PPDRESLQWI 105 (239)
T ss_dssp CSSSCEEEEE
T ss_pred CCCceEEEEE
Confidence 256788996
No 18
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=32.31 E-value=80 Score=22.18 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=24.0
Q ss_pred EEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 85 VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 85 VyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
+|.|.. .+.+. |.|+-.+.+.=.+|+..|+.++...
T Consensus 68 ~F~i~~--~~~r~-~~l~a~s~~e~~~Wi~ai~~~~~~~ 103 (113)
T 1pls_A 68 VFKITT--TKQQD-HFFQAAFLEERDAWVRDINKAIKCI 103 (113)
T ss_dssp EEEEEE--TTTEE-EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEc--CCCCE-EEEECCCHHHHHHHHHHHHHHHhcc
Confidence 555554 33333 3367777766679999999998764
No 19
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=30.12 E-value=2.4e+02 Score=23.46 Aligned_cols=76 Identities=17% Similarity=0.318 Sum_probs=43.8
Q ss_pred ceeeEecCCce-eecCCCc-EEEEEeCCCC--ceEEEEeeCCCCC--cccceEeeCCceEEEEeccCCCeEEEEEEcCC-
Q 026728 21 AGKMTFDGKKV-VPDSRKG-LVRIARGEHG--LIHFQWLDRTRNV--VEDDQIVFPHEAVFEKVNQASGRVYILKFNTD- 93 (234)
Q Consensus 21 AGk~~~~g~~V-~pd~rKG-~l~l~~~~d~--l~hf~W~~R~~~~--~Edd~ii~Pgd~~f~~V~~~tGRVyvLkF~ss- 93 (234)
|| +.++|++| -|...|. .|.|...++. |++ .|.+...+. .+..||+.|- +.|++...+.+..+.+...
T Consensus 12 ag-v~l~~TRvIy~~~~k~~sl~l~N~~~~p~LvQ-swv~~~~~~~~~~~pFivtPP---l~Rl~p~~~q~lRI~~~~~~ 86 (218)
T 4ay0_A 12 YG-VTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQ-SRIYDENKEKESEDPFVVTPP---LFRLDAKQQNSLRIAQAGGV 86 (218)
T ss_dssp -C-EEESCCEEEEETTCSCEEEEEECCSSSCEEEE-EEEECTTSCCCSSCSEEEESS---EEEECTTCEEEEEEEECSCC
T ss_pred ee-EEECceEEEECCCCcEEEEEEEcCCCCCEEEE-EEEecCCCCccccCCEEECCC---eEEeCCCCceEEEEEecCCC
Confidence 56 45788775 4444443 3555443332 444 587654432 3456999998 7788874455555555432
Q ss_pred ---CceeEEEc
Q 026728 94 ---DRKFFLWM 101 (234)
Q Consensus 94 ---~~r~fFWm 101 (234)
++-.+||+
T Consensus 87 LP~DRESlf~l 97 (218)
T 4ay0_A 87 FPRDKESLKWL 97 (218)
T ss_dssp CCSSSCEEEEE
T ss_pred CCcCcEEEEEE
Confidence 56689995
No 20
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=29.36 E-value=33 Score=31.40 Aligned_cols=52 Identities=13% Similarity=0.317 Sum_probs=34.4
Q ss_pred ecCCCcEEEEEeCCCCceEEEEeeCC-C-------CCcccceEeeCCceEEEEeccCCCeEEEEE
Q 026728 33 PDSRKGLVRIARGEHGLIHFQWLDRT-R-------NVVEDDQIVFPHEAVFEKVNQASGRVYILK 89 (234)
Q Consensus 33 pd~rKG~l~l~~~~d~l~hf~W~~R~-~-------~~~Edd~ii~Pgd~~f~~V~~~tGRVyvLk 89 (234)
-|++.|.||+..-+..-+ .||.... . -.+.|+.+++|++..+ . ..|.+|++-
T Consensus 282 ~D~~~G~ly~~~~~~~aI-~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i---~-~~g~Lwv~s 341 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQV-SCWNTQKMPLRMKNTDVVYTSSRFVFGTDISV---D-SKGGLWFMS 341 (381)
T ss_dssp ECTTTCEEEEEESSSSEE-EEEETTSCSBCGGGEEEEEECTTCCSEEEEEE---C-TTSCEEEEE
T ss_pred EeCCCCeEEEEeccCCeE-EEEeCCCCccccCceEEEEECCCccccCeEEE---C-CCCeEEEEE
Confidence 347889999977554434 8998875 1 1133556778887653 2 368899875
No 21
>2aj7_A Hypothetical protein BH3618; BH3618-like fold, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.67A {Bacillus halodurans} SCOP: b.158.1.1
Probab=28.76 E-value=52 Score=26.74 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=22.1
Q ss_pred ccceEeeCCceEEEEecc-CCCeEEEEEEcCCCceeEEEccCCCc
Q 026728 63 EDDQIVFPHEAVFEKVNQ-ASGRVYILKFNTDDRKFFLWMQEPKA 106 (234)
Q Consensus 63 Edd~ii~Pgd~~f~~V~~-~tGRVyvLkF~ss~~r~fFWmQe~~~ 106 (234)
|+++|-||.- +.. .+=|=|+|-.. ....-|||||+-+.
T Consensus 28 e~~ii~F~~G-----IpGFE~~k~F~L~~~-~~~~pf~~LQS~dd 66 (163)
T 2aj7_A 28 EDRLIAFDQG-----IPAFEDEKEFVLLPF-AAGTPYYTLQSTKT 66 (163)
T ss_dssp GGGEEECTTC-----BTTBTTCCEEEEEES-STTSCEEEEEESSC
T ss_pred ccCEEEccCC-----CcCCccceEEEEEec-CCCCcEEEEEecCC
Confidence 4566666552 222 33355555542 34569999998655
No 22
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=27.90 E-value=61 Score=23.41 Aligned_cols=37 Identities=27% Similarity=0.192 Sum_probs=25.2
Q ss_pred EEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 026728 85 VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (234)
Q Consensus 85 VyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~~ 124 (234)
||.|+. .+.+. |-||-.+.+.=.+|+..|+.+++..+
T Consensus 84 ~F~i~~--~~~~~-~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 84 VFKLGL--QDGKE-YLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp EEEEEC--SSSCE-EEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEE--cCCcE-EEEECCCHHHHHHHHHHHHHHHhccC
Confidence 555554 33232 23788888777899999999997643
No 23
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=27.86 E-value=2.6e+02 Score=23.17 Aligned_cols=76 Identities=9% Similarity=0.218 Sum_probs=46.0
Q ss_pred ceeeEecCCcee-e-cCCCcEEEEEeCCCC--ceEEEEeeCCCCCcccceEeeCCceEEEEeccCCCeEEEEEEcC----
Q 026728 21 AGKMTFDGKKVV-P-DSRKGLVRIARGEHG--LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKFNT---- 92 (234)
Q Consensus 21 AGk~~~~g~~V~-p-d~rKG~l~l~~~~d~--l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~~tGRVyvLkF~s---- 92 (234)
|| +.+++++|. + +.+-..|.|...++. |++ .|.+...+.....||+.|- +.|++...+.+..+.+..
T Consensus 12 A~-v~i~~TRvIy~~~~k~~sl~l~N~~~~p~LvQ-sWv~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~lP 86 (221)
T 2co7_B 12 FS-VKLGATRVIYHAGTAGATLSVSNPQNYPILVQ-SSVKAADKSSPAPFLVMPP---LFRLEANQQSQLRIVRTGGDMP 86 (221)
T ss_dssp EE-CEESCSEEEEETTSSCEEEEEECCSSSCEEEE-EEEEETTSSSBCSEEEESS---EEEECTTCEEEEEEEECCCCCC
T ss_pred EE-EEEcceEEEEcCCCCEEEEEEEcCCCCcEEEE-EEEecCCCCccCCEEEeCC---EEEECCCCceEEEEEECCCCCC
Confidence 44 557787653 3 334445666543332 444 4987655444578999998 778887445555554544
Q ss_pred CCceeEEEc
Q 026728 93 DDRKFFLWM 101 (234)
Q Consensus 93 s~~r~fFWm 101 (234)
.++-..||+
T Consensus 87 ~DrEslf~l 95 (221)
T 2co7_B 87 TDRETLQWV 95 (221)
T ss_dssp SSSCEEEEE
T ss_pred CCceEEEEE
Confidence 256689996
No 24
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=27.72 E-value=1.5e+02 Score=26.40 Aligned_cols=51 Identities=16% Similarity=0.198 Sum_probs=33.2
Q ss_pred ceEEEEeccCCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 72 EAVFEKVNQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 72 d~~f~~V~~~tGRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
.++.+.++. ..|=|+++..+.+++.-|-||-.+.+.=.+|+..|+.++...
T Consensus 350 ~~~v~~~~~-~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 350 NCSVMAVDC-EDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp CCEEEEECC-TTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred ceEEEECCC-CCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 344444444 345455554444444445689888887789999999999764
No 25
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=26.31 E-value=1.5e+02 Score=20.04 Aligned_cols=36 Identities=11% Similarity=0.347 Sum_probs=23.3
Q ss_pred eEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 026728 84 RVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (234)
Q Consensus 84 RVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~ 122 (234)
.+|.|.. .+.+.| .||-.+.+.=.+|+..|+.+|++
T Consensus 71 ~~F~i~~--~~~r~~-~l~a~s~~e~~~Wi~ai~~~i~~ 106 (108)
T 1u5d_A 71 SCFELTS--QDRRTY-EFTATSPAEARDWVDQISFLLKD 106 (108)
T ss_dssp GEEEEEC--SSSCCE-EEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEc--CCCcEE-EEECCCHHHHHHHHHHHHHHHHh
Confidence 3555553 332322 36777776667999999998864
No 26
>2a1k_A GP32 single stranded DNA binding protein; Zn2+ binding subdomain, 5-stranded beta-sheet, OB fold; 2.00A {Enterobacteria phage RB69} SCOP: b.40.4.7 PDB: 2atq_B* 1gpc_A
Probab=24.93 E-value=73 Score=27.51 Aligned_cols=24 Identities=21% Similarity=0.548 Sum_probs=21.1
Q ss_pred CCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 026728 81 ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (234)
Q Consensus 81 ~tGRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~ 122 (234)
..|+||++||. ..+..||+.+++-
T Consensus 110 NEGKVFlyrFG------------------kKI~dKI~aa~~~ 133 (233)
T 2a1k_A 110 NEGKVFKYRFG------------------KKIWDKINAMIAV 133 (233)
T ss_dssp GTTCEEEEEEC------------------HHHHHHHHHHHSC
T ss_pred cCccEEEehhh------------------HHHHHHHHHHhCC
Confidence 67999999996 5899999999954
No 27
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=24.03 E-value=3e+02 Score=22.52 Aligned_cols=73 Identities=11% Similarity=0.356 Sum_probs=42.2
Q ss_pred EecCCceeecC--CCcEEEEEeCCC-C--ceEEEEeeCCCCCcccceEeeCCceEEEEeccCCCeEEEEE-EcC----CC
Q 026728 25 TFDGKKVVPDS--RKGLVRIARGEH-G--LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILK-FNT----DD 94 (234)
Q Consensus 25 ~~~g~~V~pd~--rKG~l~l~~~~d-~--l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~~tGRVyvLk-F~s----s~ 94 (234)
.+++++|.=.. +-..|.|...++ . |++. |.+...+.....||+.|- +.|++...+.+..+. +.. .+
T Consensus 3 ~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQs-Wv~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~lP~D 78 (206)
T 1l4i_A 3 ALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQS-WIENAEGKKDARFVITPP---LFSMQGKKENTLRIIDATNGQMPED 78 (206)
T ss_dssp EESCSEEEEETTCSEEEEEEEECCTTCEEEEEE-EEEETTSCBCSSEEEESS---EEEEESSEEEEEEEEECCTTCSCSS
T ss_pred EeCceEEEEeCCCcEEEEEEEeCCCCccEEEEE-EEecCCCCccCCEEEcCC---eEEECCCCceEEEEEecCCCCCCCC
Confidence 46676653333 334555555433 1 4544 887654445578999998 778877444444444 322 14
Q ss_pred ceeEEEc
Q 026728 95 RKFFLWM 101 (234)
Q Consensus 95 ~r~fFWm 101 (234)
+-..||+
T Consensus 79 rEslf~l 85 (206)
T 1l4i_A 79 RESLFWV 85 (206)
T ss_dssp SCEEEEE
T ss_pred ceEEEEE
Confidence 6679996
No 28
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=22.77 E-value=1.9e+02 Score=19.93 Aligned_cols=53 Identities=4% Similarity=-0.062 Sum_probs=31.5
Q ss_pred ceEEEEecc--CCCe--EEEEEEcCC----CceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 026728 72 EAVFEKVNQ--ASGR--VYILKFNTD----DRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (234)
Q Consensus 72 d~~f~~V~~--~tGR--VyvLkF~ss----~~r~fFWmQe~~~~~D~~~~~kin~~l~~~~ 124 (234)
.++...+.. ..+| +|.|...+. ....-|.|+-.+.+.=.+|+..|+.++...+
T Consensus 55 ~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~ 115 (118)
T 1v89_A 55 GCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGP 115 (118)
T ss_dssp TEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred CCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccCC
Confidence 445554543 2334 555555321 1223344787777777799999999998654
No 29
>1uww_A Endoglucanase; carbohydrate binding module, glycosidase, lectin, cellulose, binding, CBM, hydrolase; HET: MSE; 1.4A {Bacillus akibai} SCOP: b.18.1.23
Probab=21.99 E-value=1.1e+02 Score=25.42 Aligned_cols=41 Identities=22% Similarity=0.554 Sum_probs=24.5
Q ss_pred CCCceEEEEeeC--CCCCcc-----cceEeeCCceEEEEecc-CCCeEEE--EEEc
Q 026728 46 EHGLIHFQWLDR--TRNVVE-----DDQIVFPHEAVFEKVNQ-ASGRVYI--LKFN 91 (234)
Q Consensus 46 ~d~l~hf~W~~R--~~~~~E-----dd~ii~Pgd~~f~~V~~-~tGRVyv--LkF~ 91 (234)
.|||+||+-+=- .-+... .+++|+ |--+++ =-||||+ +||.
T Consensus 139 ~DgLYh~~v~~dl~ki~~i~~dT~LR~~~li-----~aD~nSDFaGrmy~DNVRf~ 189 (191)
T 1uww_A 139 VNGLYHYEVKINVRDITNIQDDTLLRNMMII-----FADVESDFAGRVFVDNVRFE 189 (191)
T ss_dssp ETTEEEEEEEEECTTCTTSCTTCCCCEEEEE-----EEEESCCCEEEEEEEEEEEE
T ss_pred CCceEEEEEEEchhhhcccCCCceeeeeEEE-----EeccCCCccccEEEEeEEec
Confidence 589999887432 111122 344444 666666 5699998 4453
No 30
>4go6_A HCF N-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=21.62 E-value=97 Score=20.11 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=20.5
Q ss_pred CCCcEEEEEeCCCCceEEEEeeCCC
Q 026728 35 SRKGLVRIARGEHGLIHFQWLDRTR 59 (234)
Q Consensus 35 ~rKG~l~l~~~~d~l~hf~W~~R~~ 59 (234)
+..+.+.|.+....-+++||..-.+
T Consensus 8 ~~PsrVQLvRAst~sLEv~W~~vpt 32 (45)
T 4go6_A 8 PPPARVQLVRANTNSLEVSWGAVAT 32 (45)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCTT
T ss_pred CCcceEEEEEeccceEEEEcCCCcc
Confidence 3567888988888889999998765
No 31
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=21.51 E-value=1.7e+02 Score=20.32 Aligned_cols=37 Identities=11% Similarity=0.104 Sum_probs=24.5
Q ss_pred eEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 026728 84 RVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (234)
Q Consensus 84 RVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~~ 124 (234)
.+|.|. ..++. |.|+-.+.+.=.+|+..|+.+|...+
T Consensus 78 ~~F~i~--~~~r~--~~l~a~s~~e~~~Wi~al~~~i~~~~ 114 (117)
T 1v5u_A 78 AFFDVK--TTRRV--YNFCAQDVPSAQQWVDRIQSCLSSGP 114 (117)
T ss_dssp TCEEEE--ESSCE--EEEECSSHHHHHHHHHHHHTTCCCCC
T ss_pred eEEEEE--CCCce--EEEECCCHHHHHHHHHHHHHHhccCC
Confidence 466663 33443 33566666666799999999998765
No 32
>2kzk_A Uncharacterized protein YOL083W; selective autophagy, ATG34, alpha-mannosidase, ATG19, protei transport; NMR {Saccharomyces cerevisiae}
Probab=21.15 E-value=70 Score=23.93 Aligned_cols=37 Identities=30% Similarity=0.560 Sum_probs=26.8
Q ss_pred CCCceEEEEeeCCCCCcccceEeeCCceEEEEeccCCCeEEEEEE
Q 026728 46 EHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKF 90 (234)
Q Consensus 46 ~d~l~hf~W~~R~~~~~Edd~ii~Pgd~~f~~V~~~tGRVyvLkF 90 (234)
+|.-+||+-.+.+. +|+||.|+|+.-.+ -..||.+|.
T Consensus 16 ~DNSL~F~L~N~TN-------~ii~GNC~~~Fs~~-~~~~~~I~M 52 (107)
T 2kzk_A 16 EDNSLHFILYNKTN-------IIIPGNCTFEFSSQ-ISEVFSIKM 52 (107)
T ss_dssp BTTBCCEEEECCSS-------SCCCSSCEEEBCCS-SSCCBCCBC
T ss_pred CCCeEEEEEecCCc-------eEecCcceEEEecC-CCcEEEEec
Confidence 67778899888655 67899999987776 124555554
No 33
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.64 E-value=2.2e+02 Score=19.72 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=29.7
Q ss_pred ceEEEEecc--CCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 72 EAVFEKVNQ--ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 72 d~~f~~V~~--~tGRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
+++...|.. ..+|-|++.....+.+ -|.|+-.+.+.=.+|+..|+.++...
T Consensus 59 ~~~v~~~~~~~~~~~~~~F~i~~~~~r-~~~l~a~s~~e~~~Wi~al~~~~~~~ 111 (117)
T 2d9y_A 59 SFRVAAVQPSDNISRKHTFKAEHAGVR-TYFFSAESPEEQEAWIQAMGEAARVQ 111 (117)
T ss_dssp SCEEEECCTTTTCCCSSEEEEECSSSC-EEEEECSSHHHHHHHHHHHHHTTCCT
T ss_pred CeEEEEcCccccCCCccEEEEEcCCCc-EEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence 344455532 3345344443222323 25577777777779999999988754
No 34
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.21 E-value=2.3e+02 Score=19.82 Aligned_cols=23 Identities=9% Similarity=0.146 Sum_probs=17.4
Q ss_pred EEccCCCchhhHHHHHHHHHHhc
Q 026728 99 LWMQEPKAEEDSQLCNSVNYFIN 121 (234)
Q Consensus 99 FWmQe~~~~~D~~~~~kin~~l~ 121 (234)
|.|+-.+.+.=.+|+..|+.++.
T Consensus 98 ~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 98 YFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEcCCHHHHHHHHHHHHHHHh
Confidence 45777777666799999998774
No 35
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=20.11 E-value=1.7e+02 Score=20.64 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=25.5
Q ss_pred CeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 026728 83 GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (234)
Q Consensus 83 GRVyvLkF~ss~~r~fFWmQe~~~~~D~~~~~kin~~l~~~ 123 (234)
..+|.|.. .++ -|.||-.+.+.=.+|+..|+.++...
T Consensus 77 ~~~F~i~~--~~r--~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 77 DNLFEIVT--TSR--TFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp SSEEEEEC--SSC--EEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEe--CCc--EEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 34555553 333 35578777777779999999999764
Done!