Query 026729
Match_columns 234
No_of_seqs 188 out of 1401
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 20:42:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026729.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026729hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 4.1E-68 1.4E-72 487.0 18.6 221 4-231 2-223 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 3E-56 1E-60 414.1 22.1 229 3-231 26-258 (392)
3 1p4c_A L(+)-mandelate dehydrog 100.0 3.3E-54 1.1E-58 398.7 24.6 227 3-230 4-230 (380)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 6.6E-54 2.2E-58 395.3 24.6 228 3-230 3-230 (370)
5 2nli_A Lactate oxidase; flavoe 100.0 2.9E-54 9.8E-59 397.8 19.2 224 2-231 11-235 (368)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 3.8E-52 1.3E-56 397.9 21.2 223 3-231 121-349 (511)
7 2qr6_A IMP dehydrogenase/GMP r 99.9 3.3E-26 1.1E-30 211.4 -5.4 187 15-230 13-216 (393)
8 1vcf_A Isopentenyl-diphosphate 99.8 1.9E-22 6.6E-27 182.5 -3.8 99 23-129 8-111 (332)
9 3sr7_A Isopentenyl-diphosphate 99.7 1.7E-17 5.8E-22 152.6 11.1 147 41-231 54-212 (365)
10 1p0k_A Isopentenyl-diphosphate 99.7 1.6E-17 5.5E-22 150.9 10.6 150 39-232 21-185 (349)
11 3r2g_A Inosine 5'-monophosphat 99.7 1.2E-17 4.1E-22 153.3 9.1 111 41-161 8-122 (361)
12 3vkj_A Isopentenyl-diphosphate 99.5 9.9E-14 3.4E-18 127.6 9.2 118 41-158 27-157 (368)
13 1ypf_A GMP reductase; GUAC, pu 99.4 1.7E-14 5.8E-19 130.7 1.7 143 35-230 8-153 (336)
14 1eep_A Inosine 5'-monophosphat 99.3 1.2E-12 4.2E-17 121.0 6.0 113 41-161 10-133 (404)
15 2c6q_A GMP reductase 2; TIM ba 99.3 2.7E-12 9.3E-17 117.2 7.6 78 35-120 14-98 (351)
16 1gte_A Dihydropyrimidine dehyd 98.6 1.2E-07 4.2E-12 96.8 9.5 143 50-232 522-710 (1025)
17 1f76_A Dihydroorotate dehydrog 98.3 2.1E-07 7.1E-12 83.6 3.9 164 45-232 31-218 (336)
18 2e6f_A Dihydroorotate dehydrog 97.8 5.7E-05 2E-09 66.8 8.5 97 59-162 2-135 (314)
19 1vhn_A Putative flavin oxidore 97.8 2E-05 6.8E-10 70.3 4.9 122 69-231 2-132 (318)
20 3khj_A Inosine-5-monophosphate 97.5 0.00035 1.2E-08 63.8 9.2 102 42-160 14-126 (361)
21 1jub_A Dihydroorotate dehydrog 97.5 0.0006 2.1E-08 60.1 10.1 41 61-107 2-42 (311)
22 1ep3_A Dihydroorotate dehydrog 97.4 0.0001 3.5E-09 64.6 4.1 98 57-161 3-137 (311)
23 1wv2_A Thiazole moeity, thiazo 97.0 0.00071 2.4E-08 59.2 5.4 107 100-230 72-192 (265)
24 4fo4_A Inosine 5'-monophosphat 96.7 0.0042 1.5E-07 56.7 8.0 106 42-157 15-128 (366)
25 2gjl_A Hypothetical protein PA 94.9 0.13 4.6E-06 45.4 9.7 89 63-160 9-107 (328)
26 2z6i_A Trans-2-enoyl-ACP reduc 94.9 0.065 2.2E-06 47.6 7.5 87 63-160 6-99 (332)
27 3tjx_A Dihydroorotate dehydrog 94.5 0.058 2E-06 48.4 6.4 44 56-105 32-75 (354)
28 4ef8_A Dihydroorotate dehydrog 94.4 0.13 4.4E-06 46.6 8.4 107 49-162 25-168 (354)
29 3b0p_A TRNA-dihydrouridine syn 93.3 0.33 1.1E-05 43.5 8.8 85 70-161 2-95 (350)
30 3bw2_A 2-nitropropane dioxygen 89.2 1.7 5.7E-05 38.9 9.1 84 71-160 10-133 (369)
31 3bo9_A Putative nitroalkan dio 89.0 2.2 7.6E-05 37.6 9.6 83 69-160 24-113 (326)
32 3oix_A Putative dihydroorotate 88.9 4 0.00014 36.6 11.3 96 59-162 36-168 (345)
33 1xm3_A Thiazole biosynthesis p 88.9 0.82 2.8E-05 39.3 6.5 84 124-231 94-184 (264)
34 3ffs_A Inosine-5-monophosphate 88.8 0.45 1.5E-05 43.8 5.0 69 42-118 11-81 (400)
35 1ea0_A Glutamate synthase [NAD 87.1 0.44 1.5E-05 50.5 4.2 81 43-130 825-911 (1479)
36 1ofd_A Ferredoxin-dependent gl 77.9 1.6 5.3E-05 46.5 4.0 47 69-117 865-911 (1520)
37 1z41_A YQJM, probable NADH-dep 75.4 18 0.00061 31.8 9.8 22 62-83 8-29 (338)
38 1vyr_A Pentaerythritol tetrani 69.4 43 0.0015 29.8 11.0 45 63-107 9-56 (364)
39 1jub_A Dihydroorotate dehydrog 68.3 20 0.00067 30.8 8.2 82 71-156 93-192 (311)
40 3sz8_A 2-dehydro-3-deoxyphosph 66.3 10 0.00035 33.2 6.0 66 80-150 70-135 (285)
41 2gou_A Oxidoreductase, FMN-bin 65.2 20 0.00068 32.0 7.9 45 63-107 9-56 (365)
42 3glc_A Aldolase LSRF; TIM barr 64.5 35 0.0012 29.7 9.2 65 92-156 193-257 (295)
43 3b0p_A TRNA-dihydrouridine syn 61.7 28 0.00096 30.8 8.1 42 115-156 119-164 (350)
44 1vr6_A Phospho-2-dehydro-3-deo 61.7 13 0.00044 33.5 5.9 60 87-152 156-216 (350)
45 1vs1_A 3-deoxy-7-phosphoheptul 60.6 16 0.00053 31.7 6.1 62 87-154 88-150 (276)
46 3zwt_A Dihydroorotate dehydrog 60.4 7.8 0.00027 34.9 4.2 123 31-162 22-189 (367)
47 2r91_A 2-keto-3-deoxy-(6-phosp 58.0 34 0.0012 29.3 7.8 82 73-157 5-98 (286)
48 2uva_G Fatty acid synthase bet 57.9 18 0.00062 39.8 7.1 105 48-160 558-679 (2060)
49 3nvt_A 3-deoxy-D-arabino-heptu 57.5 15 0.0005 33.4 5.6 57 92-154 197-254 (385)
50 1viz_A PCRB protein homolog; s 56.3 6.2 0.00021 33.6 2.7 25 133-157 17-41 (240)
51 2r14_A Morphinone reductase; H 55.9 69 0.0024 28.6 9.8 44 62-107 14-60 (377)
52 2ehh_A DHDPS, dihydrodipicolin 54.3 51 0.0017 28.2 8.3 83 73-157 7-103 (294)
53 3tml_A 2-dehydro-3-deoxyphosph 53.8 15 0.00052 32.1 4.8 47 80-129 67-113 (288)
54 3ks6_A Glycerophosphoryl diest 53.1 16 0.00056 30.5 4.8 73 88-160 117-215 (250)
55 2f6u_A GGGPS, (S)-3-O-geranylg 52.9 5.9 0.0002 33.6 1.9 25 133-157 17-41 (234)
56 2yxg_A DHDPS, dihydrodipicolin 52.8 51 0.0017 28.2 8.0 83 73-157 7-103 (289)
57 3vnd_A TSA, tryptophan synthas 52.8 30 0.001 29.7 6.5 78 125-233 18-103 (267)
58 3zen_D Fatty acid synthase; tr 52.7 32 0.0011 39.4 8.2 104 47-160 402-527 (3089)
59 3fs2_A 2-dehydro-3-deoxyphosph 52.6 12 0.00039 33.1 3.9 67 80-151 91-157 (298)
60 2nwr_A 2-dehydro-3-deoxyphosph 52.5 21 0.00072 30.7 5.5 65 81-150 55-119 (267)
61 3i65_A Dihydroorotate dehydrog 52.1 17 0.00058 33.4 5.1 73 45-129 69-142 (415)
62 4af0_A Inosine-5'-monophosphat 52.1 25 0.00085 33.6 6.3 108 42-159 61-178 (556)
63 3nav_A Tryptophan synthase alp 51.9 29 0.001 29.8 6.3 80 123-233 18-105 (271)
64 2nuw_A 2-keto-3-deoxygluconate 51.8 58 0.002 27.8 8.3 83 73-157 5-99 (288)
65 3cpr_A Dihydrodipicolinate syn 51.5 86 0.0029 27.0 9.4 85 72-157 21-119 (304)
66 3b4u_A Dihydrodipicolinate syn 50.9 92 0.0032 26.6 9.4 84 73-157 9-106 (294)
67 2jz7_A Selenium binding protei 50.0 14 0.00049 26.3 3.3 25 136-160 35-60 (81)
68 3l21_A DHDPS, dihydrodipicolin 49.8 80 0.0027 27.2 8.9 85 72-157 20-118 (304)
69 2v9d_A YAGE; dihydrodipicolini 49.8 91 0.0031 27.4 9.4 85 72-157 36-134 (343)
70 3rjz_A N-type ATP pyrophosphat 49.6 11 0.00039 31.9 3.3 85 68-163 60-153 (237)
71 1xky_A Dihydrodipicolinate syn 49.2 87 0.003 26.9 9.0 85 73-158 18-116 (301)
72 1w3i_A EDA, 2-keto-3-deoxy glu 49.1 66 0.0023 27.5 8.2 83 73-157 5-99 (293)
73 1o60_A 2-dehydro-3-deoxyphosph 49.1 29 0.001 30.2 5.9 63 87-154 75-137 (292)
74 1x60_A Sporulation-specific N- 48.7 50 0.0017 22.1 6.0 34 122-155 7-40 (79)
75 1zco_A 2-dehydro-3-deoxyphosph 48.6 25 0.00086 30.0 5.3 62 87-154 73-135 (262)
76 2wkj_A N-acetylneuraminate lya 48.4 84 0.0029 27.0 8.8 84 73-157 17-114 (303)
77 3can_A Pyruvate-formate lyase- 48.2 91 0.0031 23.9 8.7 82 79-160 10-103 (182)
78 3s5o_A 4-hydroxy-2-oxoglutarat 48.1 84 0.0029 27.1 8.8 85 72-157 19-117 (307)
79 1o5k_A DHDPS, dihydrodipicolin 47.9 45 0.0015 28.8 7.0 84 72-157 18-115 (306)
80 3k30_A Histamine dehydrogenase 47.3 72 0.0025 30.4 8.9 45 62-107 17-63 (690)
81 1gvf_A Tagatose-bisphosphate a 47.2 15 0.0005 32.2 3.6 65 88-156 29-104 (286)
82 1rd5_A Tryptophan synthase alp 47.2 87 0.003 25.9 8.5 31 125-155 18-51 (262)
83 2cu0_A Inosine-5'-monophosphat 47.1 41 0.0014 30.9 6.9 40 42-81 16-57 (486)
84 3fkr_A L-2-keto-3-deoxyarabona 47.0 70 0.0024 27.7 8.1 88 72-162 13-114 (309)
85 3flu_A DHDPS, dihydrodipicolin 46.4 90 0.0031 26.7 8.6 84 73-157 13-110 (297)
86 4fxs_A Inosine-5'-monophosphat 45.2 41 0.0014 31.3 6.6 103 42-158 12-128 (496)
87 3usb_A Inosine-5'-monophosphat 45.0 50 0.0017 30.8 7.2 103 42-158 36-152 (511)
88 3tak_A DHDPS, dihydrodipicolin 45.0 82 0.0028 26.9 8.1 84 73-157 7-104 (291)
89 3l12_A Putative glycerophospho 44.5 21 0.00071 30.8 4.2 70 91-160 168-279 (313)
90 1vr4_A Hypothetical protein AP 44.5 18 0.00062 26.7 3.3 27 136-162 60-87 (103)
91 3qze_A DHDPS, dihydrodipicolin 43.9 69 0.0024 27.8 7.6 100 57-157 9-126 (314)
92 3qvq_A Phosphodiesterase OLEI0 43.6 20 0.00069 29.9 3.9 68 93-160 132-221 (252)
93 1ps9_A 2,4-dienoyl-COA reducta 43.5 1.1E+02 0.0039 28.9 9.7 21 62-82 8-28 (671)
94 3qkb_A Uncharacterized protein 43.5 19 0.00066 27.1 3.3 25 136-160 62-87 (111)
95 1f6k_A N-acetylneuraminate lya 43.2 90 0.0031 26.6 8.1 84 73-157 9-107 (293)
96 3dz1_A Dihydrodipicolinate syn 43.0 95 0.0033 26.8 8.3 84 72-156 13-109 (313)
97 3eb2_A Putative dihydrodipicol 42.6 1.1E+02 0.0038 26.2 8.7 87 72-159 9-109 (300)
98 3a5f_A Dihydrodipicolinate syn 41.5 1.2E+02 0.004 25.9 8.6 98 72-173 7-119 (291)
99 3h5d_A DHDPS, dihydrodipicolin 41.3 1.7E+02 0.0058 25.2 9.7 84 73-157 13-111 (311)
100 2r8w_A AGR_C_1641P; APC7498, d 41.0 1.1E+02 0.0038 26.7 8.5 84 73-157 40-137 (332)
101 3e96_A Dihydrodipicolinate syn 40.7 1.1E+02 0.0036 26.5 8.3 83 72-156 16-113 (316)
102 2e6f_A Dihydroorotate dehydrog 40.5 25 0.00084 30.2 4.1 35 122-156 160-195 (314)
103 3lmz_A Putative sugar isomeras 39.8 1.4E+02 0.0049 23.9 8.6 85 68-156 14-109 (257)
104 4dpp_A DHDPS 2, dihydrodipicol 39.6 1.4E+02 0.0049 26.6 9.0 86 71-157 63-162 (360)
105 1nh8_A ATP phosphoribosyltrans 37.5 49 0.0017 29.2 5.5 61 96-156 226-297 (304)
106 1qop_A Tryptophan synthase alp 37.4 34 0.0012 28.9 4.4 31 126-156 18-51 (268)
107 4avf_A Inosine-5'-monophosphat 37.3 50 0.0017 30.6 5.8 106 42-156 11-125 (490)
108 2l82_A Designed protein OR32; 37.2 30 0.001 26.4 3.5 30 131-160 8-37 (162)
109 2oog_A Glycerophosphoryl diest 37.0 23 0.00078 30.1 3.2 71 90-160 150-252 (287)
110 2ojp_A DHDPS, dihydrodipicolin 36.8 87 0.003 26.7 7.0 84 73-157 7-104 (292)
111 1y2i_A Hypothetical protein S0 36.7 25 0.00085 27.3 3.1 27 136-162 84-111 (133)
112 2qkf_A 3-deoxy-D-manno-octulos 36.5 57 0.0019 28.1 5.7 62 87-153 72-133 (280)
113 3h6g_A Glutamate receptor, ion 36.0 1.2E+02 0.0041 25.9 7.9 65 90-160 84-148 (395)
114 3na8_A Putative dihydrodipicol 35.9 1.7E+02 0.0056 25.3 8.7 86 72-158 29-128 (315)
115 3daq_A DHDPS, dihydrodipicolin 35.8 1E+02 0.0035 26.3 7.3 83 73-157 9-105 (292)
116 1tv5_A Dhodehase, dihydroorota 35.5 36 0.0012 31.4 4.5 109 46-162 68-222 (443)
117 3q94_A Fructose-bisphosphate a 35.5 18 0.00062 31.6 2.4 70 88-163 32-115 (288)
118 2ekc_A AQ_1548, tryptophan syn 35.4 1E+02 0.0034 25.8 7.1 24 133-156 28-51 (262)
119 3si9_A DHDPS, dihydrodipicolin 35.1 2E+02 0.007 24.8 9.2 85 72-157 27-125 (315)
120 1ka9_F Imidazole glycerol phos 34.6 74 0.0025 25.9 6.0 19 138-156 154-172 (252)
121 3nk6_A 23S rRNA methyltransfer 34.6 1E+02 0.0035 26.3 7.0 70 99-171 96-166 (277)
122 3m5v_A DHDPS, dihydrodipicolin 34.6 1.3E+02 0.0045 25.7 7.8 83 73-157 14-111 (301)
123 1z4e_A Transcriptional regulat 34.4 44 0.0015 24.0 4.2 47 128-174 90-143 (153)
124 3h4q_A Putative acetyltransfer 34.1 45 0.0015 24.8 4.3 49 126-174 108-161 (188)
125 3mz2_A Glycerophosphoryl diest 34.1 75 0.0026 27.2 6.1 29 132-160 211-239 (292)
126 3d0c_A Dihydrodipicolinate syn 34.0 1.6E+02 0.0056 25.3 8.4 83 73-157 17-114 (314)
127 3zwt_A Dihydroorotate dehydrog 33.7 47 0.0016 29.7 4.9 34 123-156 221-254 (367)
128 2vc6_A MOSA, dihydrodipicolina 33.5 1.7E+02 0.0059 24.8 8.4 84 73-158 7-104 (292)
129 2q5c_A NTRC family transcripti 33.5 42 0.0014 27.1 4.2 86 62-154 61-147 (196)
130 2isw_A Putative fructose-1,6-b 33.3 20 0.0007 31.9 2.3 65 88-156 29-105 (323)
131 1o94_A Tmadh, trimethylamine d 33.0 1.8E+02 0.0062 27.9 9.3 20 62-81 12-31 (729)
132 1x60_A Sporulation-specific N- 33.0 72 0.0025 21.3 4.8 31 126-156 45-77 (79)
133 1m65_A Hypothetical protein YC 32.5 29 0.00099 28.1 3.1 23 138-160 20-42 (245)
134 1f76_A Dihydroorotate dehydrog 32.5 43 0.0015 29.0 4.4 36 122-157 211-246 (336)
135 3sho_A Transcriptional regulat 32.4 95 0.0032 23.8 6.0 61 98-158 62-123 (187)
136 1zfj_A Inosine monophosphate d 32.3 67 0.0023 29.3 5.8 104 42-156 13-127 (491)
137 3qfe_A Putative dihydrodipicol 32.0 1.1E+02 0.0038 26.5 7.0 84 73-157 16-114 (318)
138 1ujp_A Tryptophan synthase alp 31.8 1.2E+02 0.0041 25.7 7.0 77 125-233 16-99 (271)
139 2pju_A Propionate catabolism o 31.6 58 0.002 27.1 4.8 136 5-154 19-159 (225)
140 1aj0_A DHPS, dihydropteroate s 31.6 86 0.0029 27.0 6.0 22 135-156 162-185 (282)
141 2yxo_A Histidinol phosphatase; 31.6 33 0.0011 28.1 3.3 25 138-162 18-42 (267)
142 1zcc_A Glycerophosphodiester p 31.4 75 0.0026 26.2 5.5 70 91-160 115-205 (248)
143 1rvg_A Fructose-1,6-bisphospha 31.3 24 0.00083 31.1 2.5 22 209-230 186-207 (305)
144 1oy0_A Ketopantoate hydroxymet 30.9 66 0.0023 27.9 5.2 40 133-176 174-216 (281)
145 2rfg_A Dihydrodipicolinate syn 30.8 1.7E+02 0.0059 24.9 7.9 83 73-157 7-103 (297)
146 3p6l_A Sugar phosphate isomera 30.5 1.3E+02 0.0045 24.1 6.9 30 127-156 82-111 (262)
147 1o66_A 3-methyl-2-oxobutanoate 30.4 59 0.002 28.2 4.8 22 136-157 158-182 (275)
148 2uyg_A 3-dehydroquinate dehydr 30.4 74 0.0025 25.1 4.9 65 109-176 21-94 (149)
149 3pm6_A Putative fructose-bisph 30.4 29 0.00099 30.6 2.8 22 209-230 203-226 (306)
150 3no3_A Glycerophosphodiester p 30.1 40 0.0014 27.8 3.5 70 91-160 118-207 (238)
151 3t9y_A Acetyltransferase, GNAT 30.1 49 0.0017 23.2 3.7 38 137-174 101-140 (150)
152 3n9r_A Fructose-bisphosphate a 29.6 22 0.00074 31.4 1.8 22 209-230 188-209 (307)
153 1xm3_A Thiazole biosynthesis p 29.4 90 0.0031 26.2 5.7 91 62-159 3-101 (264)
154 3jvn_A Acetyltransferase; alph 29.4 48 0.0016 23.8 3.6 38 137-174 109-146 (166)
155 4evy_A Aminoglycoside N(6')-ac 28.3 49 0.0017 24.2 3.5 38 137-174 116-153 (166)
156 1vkc_A Putative acetyl transfe 28.3 70 0.0024 23.0 4.4 37 137-174 112-148 (158)
157 1tx2_A DHPS, dihydropteroate s 28.2 92 0.0032 27.1 5.7 21 136-156 182-204 (297)
158 3tr9_A Dihydropteroate synthas 28.2 78 0.0027 27.9 5.2 21 136-156 177-199 (314)
159 3viv_A 441AA long hypothetical 28.0 46 0.0016 27.8 3.6 25 137-161 26-50 (230)
160 2uv8_G Fatty acid synthase sub 27.7 91 0.0031 34.4 6.5 104 47-158 564-682 (2051)
161 3f8k_A Protein acetyltransfera 27.2 58 0.002 23.2 3.7 38 137-174 94-131 (160)
162 2h9a_B CO dehydrogenase/acetyl 27.0 92 0.0032 27.2 5.5 86 71-163 122-214 (310)
163 1s3z_A Aminoglycoside 6'-N-ace 26.7 61 0.0021 23.4 3.8 50 125-174 96-153 (165)
164 2hmc_A AGR_L_411P, dihydrodipi 26.6 2E+02 0.0067 25.3 7.7 84 73-157 32-126 (344)
165 4djd_C C/Fe-SP, corrinoid/iron 26.5 98 0.0033 28.7 5.8 75 69-157 153-233 (446)
166 3txv_A Probable tagatose 6-pho 26.4 61 0.0021 30.1 4.4 75 85-159 29-134 (450)
167 1u6m_A Acetyltransferase, GNAT 26.4 37 0.0013 26.0 2.6 47 128-174 117-170 (199)
168 3lod_A Putative acyl-COA N-acy 26.3 50 0.0017 23.6 3.2 47 128-174 79-132 (162)
169 3i65_A Dihydroorotate dehydrog 26.3 87 0.003 28.7 5.3 34 123-156 269-303 (415)
170 2dqw_A Dihydropteroate synthas 26.0 1.1E+02 0.0037 26.6 5.7 21 136-156 177-197 (294)
171 4ggj_A Mitochondrial cardiolip 25.9 89 0.003 24.9 4.9 36 122-159 59-94 (196)
172 1qo2_A Molecule: N-((5-phospho 25.8 94 0.0032 25.2 5.1 19 212-230 175-193 (241)
173 3gr7_A NADPH dehydrogenase; fl 25.7 2.9E+02 0.01 24.0 8.6 41 117-157 204-250 (340)
174 4eyg_A Twin-arginine transloca 25.6 1.2E+02 0.0043 25.2 6.0 59 90-154 85-143 (368)
175 2zsk_A PH1733, 226AA long hypo 25.6 43 0.0015 27.2 2.9 38 137-176 61-98 (226)
176 3ojc_A Putative aspartate/glut 25.5 33 0.0011 28.4 2.2 38 137-176 64-101 (231)
177 3td9_A Branched chain amino ac 25.5 1.4E+02 0.0048 25.0 6.3 62 89-156 93-155 (366)
178 3g8w_A Lactococcal prophage PS 25.4 58 0.002 23.5 3.4 38 137-174 102-139 (169)
179 2dxq_A AGR_C_4057P, acetyltran 25.4 69 0.0023 23.1 3.8 38 137-174 102-139 (150)
180 3n0w_A ABC branched chain amin 25.4 1.3E+02 0.0046 25.3 6.3 62 90-155 86-147 (379)
181 2y5s_A DHPS, dihydropteroate s 25.2 1.1E+02 0.0038 26.5 5.6 22 135-156 170-193 (294)
182 3fyn_A Integron gene cassette 25.2 58 0.002 23.9 3.4 39 137-175 121-159 (176)
183 3d8p_A Acetyltransferase of GN 25.2 70 0.0024 22.7 3.8 38 137-174 99-136 (163)
184 3lop_A Substrate binding perip 24.8 94 0.0032 26.1 5.1 60 90-156 86-147 (364)
185 2otd_A Glycerophosphodiester p 24.7 75 0.0026 26.0 4.3 58 103-160 142-218 (247)
186 4e0a_A BH1408 protein; structu 24.7 64 0.0022 22.8 3.5 38 137-174 109-146 (164)
187 3c8f_A Pyruvate formate-lyase 24.4 2.5E+02 0.0086 21.8 8.0 81 80-160 77-171 (245)
188 3i3g_A N-acetyltransferase; ma 24.4 1.3E+02 0.0044 21.4 5.2 35 137-174 117-151 (161)
189 2cy2_A TTHA1209, probable acet 24.3 66 0.0022 22.9 3.5 50 125-174 89-146 (174)
190 1f6y_A 5-methyltetrahydrofolat 24.2 1.6E+02 0.0055 24.8 6.4 23 136-158 138-162 (262)
191 1vrd_A Inosine-5'-monophosphat 24.1 1.2E+02 0.0041 27.7 6.0 68 42-117 18-87 (494)
192 2c4w_A 3-dehydroquinate dehydr 24.0 1.2E+02 0.0042 24.5 5.2 65 109-176 31-106 (176)
193 1icp_A OPR1, 12-oxophytodienoa 24.0 3.7E+02 0.013 23.7 10.9 21 62-82 19-39 (376)
194 1eye_A DHPS 1, dihydropteroate 24.0 1.2E+02 0.0041 26.1 5.6 23 135-157 154-178 (280)
195 2anu_A Hypothetical protein TM 24.0 54 0.0018 27.1 3.3 20 138-157 37-56 (255)
196 2fiq_A Putative tagatose 6-pho 23.8 1.8E+02 0.0062 26.6 7.0 75 85-159 22-127 (420)
197 1xx1_A Smase I, sphingomyelina 23.7 30 0.001 29.1 1.6 24 137-160 210-235 (285)
198 3igs_A N-acetylmannosamine-6-p 23.7 89 0.003 25.8 4.6 67 84-156 32-108 (232)
199 2z6i_A Trans-2-enoyl-ACP reduc 23.6 1.4E+02 0.0049 25.7 6.1 57 91-156 78-137 (332)
200 1vd6_A Glycerophosphoryl diest 23.6 53 0.0018 26.6 3.1 24 137-160 174-197 (224)
201 3tha_A Tryptophan synthase alp 23.5 1.4E+02 0.0047 25.4 5.8 33 125-157 14-49 (252)
202 3qvl_A Putative hydantoin race 23.3 75 0.0026 26.5 4.1 35 139-176 59-93 (245)
203 1me8_A Inosine-5'-monophosphat 23.3 1.4E+02 0.0047 27.6 6.2 39 42-80 11-60 (503)
204 1v77_A PH1877P, hypothetical p 23.0 47 0.0016 27.0 2.7 21 92-112 151-171 (212)
205 2j8m_A Acetyltransferase PA486 22.9 70 0.0024 23.5 3.5 38 137-174 103-140 (172)
206 2pz0_A Glycerophosphoryl diest 22.9 43 0.0015 27.8 2.4 70 90-159 131-221 (252)
207 2fli_A Ribulose-phosphate 3-ep 22.9 2.1E+02 0.007 22.5 6.6 20 141-160 76-95 (220)
208 3sg0_A Extracellular ligand-bi 22.7 1.1E+02 0.0038 25.6 5.1 63 90-155 102-164 (386)
209 2xhz_A KDSD, YRBH, arabinose 5 22.7 1.5E+02 0.005 22.6 5.5 38 122-159 96-133 (183)
210 2wje_A CPS4B, tyrosine-protein 22.7 45 0.0015 27.4 2.5 27 134-160 22-48 (247)
211 1vli_A Spore coat polysacchari 22.5 1.1E+02 0.0039 27.6 5.3 42 86-129 99-140 (385)
212 1mk4_A Hypothetical protein YQ 22.5 74 0.0025 22.5 3.5 47 128-174 73-126 (157)
213 1bo4_A Protein (serratia marce 22.4 64 0.0022 23.1 3.1 46 128-173 110-162 (168)
214 1gz0_A Hypothetical tRNA/RRNA 22.4 2.4E+02 0.0081 23.5 7.1 59 101-159 79-140 (253)
215 3i09_A Periplasmic branched-ch 22.3 1.8E+02 0.0062 24.4 6.5 64 89-156 83-146 (375)
216 3dr6_A YNCA; acetyltransferase 22.3 76 0.0026 22.5 3.5 38 137-174 103-140 (174)
217 2hsa_B 12-oxophytodienoate red 22.2 4.2E+02 0.014 23.6 11.4 20 139-158 174-193 (402)
218 3g8r_A Probable spore coat pol 22.2 88 0.003 28.0 4.4 42 86-129 76-117 (350)
219 2r1i_A GCN5-related N-acetyltr 22.0 75 0.0025 22.8 3.4 48 127-174 101-155 (172)
220 3i45_A Twin-arginine transloca 21.8 1.3E+02 0.0044 25.6 5.4 22 90-111 86-107 (387)
221 3dsb_A Putative acetyltransfer 21.8 1.1E+02 0.0036 21.3 4.2 38 137-174 105-143 (157)
222 1o1z_A GDPD, glycerophosphodie 21.6 2.1E+02 0.0072 23.2 6.5 22 139-160 188-209 (234)
223 2cnt_A Modification of 30S rib 21.5 76 0.0026 23.0 3.4 38 137-174 84-121 (160)
224 1jfl_A Aspartate racemase; alp 21.4 55 0.0019 26.6 2.8 39 136-176 61-99 (228)
225 1qsm_A HPA2 histone acetyltran 21.4 52 0.0018 23.0 2.4 50 125-174 84-141 (152)
226 4gel_A Mitochondrial cardiolip 21.3 1E+02 0.0034 24.5 4.3 37 123-161 72-108 (220)
227 1tv5_A Dhodehase, dihydroorota 21.0 1.1E+02 0.0036 28.2 4.9 36 123-158 297-333 (443)
228 2ha8_A TAR (HIV-1) RNA loop bi 20.9 1.2E+02 0.0042 24.0 4.7 77 81-158 31-109 (184)
229 1fob_A Beta-1,4-galactanase; B 20.8 1.3E+02 0.0043 26.2 5.2 62 94-157 12-80 (334)
230 2pdo_A Acetyltransferase YPEA; 20.7 84 0.0029 22.4 3.4 47 128-174 74-127 (144)
231 3s81_A Putative aspartate race 20.7 48 0.0016 28.2 2.3 39 136-176 86-124 (268)
232 3q58_A N-acetylmannosamine-6-p 20.6 75 0.0026 26.3 3.5 65 84-156 32-108 (229)
233 3ipc_A ABC transporter, substr 20.5 1.6E+02 0.0055 24.4 5.7 64 90-158 82-146 (356)
234 3hut_A Putative branched-chain 20.5 1.9E+02 0.0066 23.9 6.2 60 90-155 85-144 (358)
235 2eq5_A 228AA long hypothetical 20.4 1.1E+02 0.0038 24.5 4.5 34 140-176 66-99 (228)
236 1thf_D HISF protein; thermophI 20.3 2.1E+02 0.0072 23.0 6.2 19 138-156 153-171 (253)
237 1jvn_A Glutamine, bifunctional 20.3 63 0.0022 30.4 3.2 32 125-156 437-472 (555)
238 2yb1_A Amidohydrolase; HET: AM 20.3 57 0.0019 27.8 2.7 28 138-165 19-46 (292)
239 2b5g_A Diamine acetyltransfera 20.2 78 0.0027 22.7 3.2 37 137-173 109-145 (171)
240 2bei_A Diamine acetyltransfera 20.2 86 0.0029 23.2 3.5 47 128-174 93-146 (170)
241 1rpx_A Protein (ribulose-phosp 20.1 3.3E+02 0.011 21.6 8.8 80 72-158 9-100 (230)
242 2ge3_A Probable acetyltransfer 20.1 77 0.0026 23.1 3.2 38 137-174 106-143 (170)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=4.1e-68 Score=487.04 Aligned_cols=221 Identities=36% Similarity=0.560 Sum_probs=200.4
Q ss_pred CCChHHHHHHHHHhCChhhhhhhcCCCCchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEeccccccc
Q 026729 4 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQK 83 (234)
Q Consensus 4 ~~~i~D~e~~Ar~~Lp~~~~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~ 83 (234)
++|++|||+.||++||+.+|+||+|||+||.|+++|+++|++|+|+||+|+||+++||+|||||+++++||+|||+|+++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCC-CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCCC
Q 026729 84 MAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (234)
Q Consensus 84 l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~ 162 (234)
|+||+||+++||||+++|++|++||+|++|+|||+++.+ ++.|||||+++|++.++++|+|||++||+|||||||+|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999998876 7899999999999999999999999999999999999999
Q ss_pred CchhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCccccc
Q 026729 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDVM 231 (234)
Q Consensus 163 G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~~ 231 (234)
|+||+|+||+|.+|++++++++.... . .....+ .....++|+++|++|+|||+.|++||.|-
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~-~---~~~~~~---~~~~~~d~~~~w~~i~~lr~~~~~PvivK 223 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALK-E---EKPTQS---VPVLFPKASFCWNDLSLLQSITRLPIILK 223 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHHHHHHCCSCEEEE
T ss_pred CcchhhhhcCCCCCcccchhhhcccc-c---ccccch---hhhhccCCCCCHHHHHHHHHhcCCCEEEE
Confidence 99999999999999888888775421 0 001111 12266899999999999999999999864
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=3e-56 Score=414.06 Aligned_cols=229 Identities=51% Similarity=0.797 Sum_probs=202.1
Q ss_pred CCCChHHHHHHHHHhCChhhhhhhcCCCCchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEecccccc
Q 026729 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (234)
Q Consensus 3 ~~~~i~D~e~~Ar~~Lp~~~~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~ 82 (234)
.++|++|||+.||++||+.+|+||+||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||++
T Consensus 26 ~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~ 105 (392)
T 2nzl_A 26 RLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQ 105 (392)
T ss_dssp CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcC-CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCC
Q 026729 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG-PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (234)
Q Consensus 83 ~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~-~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv 161 (234)
++.||+||.++|++|+++|++|++|+++++++|++++.. +++.|||||+++|++.+.++++||+++||++|+||+|+|+
T Consensus 106 ~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~ 185 (392)
T 2nzl_A 106 RMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPY 185 (392)
T ss_dssp GGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred ccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 999999999999999999999999999999999998764 4789999999999999999999999999999999999999
Q ss_pred CCchhhHhhccCCCCCcCcccccccccc--CCCcc-cCcccHHHHhhhcCCCCCChHHHHHHHHhCCCccccc
Q 026729 162 LGRREADIKNRFTLPPFLTLKNFQGLDL--GKMDE-ANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDVM 231 (234)
Q Consensus 162 ~G~Re~d~r~~f~~p~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~~ 231 (234)
.|+|++|+||+|.+|++++.+|+..... ..... ..+.++..++...+++.++|++|+|||+.|++||.|-
T Consensus 186 ~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK 258 (392)
T 2nzl_A 186 LGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAK 258 (392)
T ss_dssp CCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEE
T ss_pred ccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEE
Confidence 9999999999999999987777542110 00000 1122345567777799999999999999999999874
No 3
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=3.3e-54 Score=398.72 Aligned_cols=227 Identities=41% Similarity=0.704 Sum_probs=204.4
Q ss_pred CCCChHHHHHHHHHhCChhhhhhhcCCCCchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEecccccc
Q 026729 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (234)
Q Consensus 3 ~~~~i~D~e~~Ar~~Lp~~~~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~ 82 (234)
+++|++|||+.||++||+.+|+||+||++||.|+++|+.+|++|+|+||+|+|++++||+|+|||+++++||+|||||++
T Consensus 4 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~~ 83 (380)
T 1p4c_A 4 NLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLN 83 (380)
T ss_dssp CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCcccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCCC
Q 026729 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (234)
Q Consensus 83 ~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~ 162 (234)
+++||+||.++|++|+++|+++++|+.+++++|+|++..+++.|||||+++ ++.+.++++||+++||++++||||+|+.
T Consensus 84 ~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~ 162 (380)
T 1p4c_A 84 GALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVN 162 (380)
T ss_dssp GGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred ccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCccc
Confidence 999999999999999999999999999999999998765678999999999 9999999999999999999999999999
Q ss_pred CchhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCcccc
Q 026729 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 163 G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~ 230 (234)
|+|++|+|++|.+|..++..++....+.++.+.....+..+.+..++|.++|+.|+|+|+.|++||.|
T Consensus 163 g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~v 230 (380)
T 1p4c_A 163 GYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLV 230 (380)
T ss_dssp CCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEE
T ss_pred cchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEE
Confidence 99999999999988877776653211222222222334455566679999999999999999999876
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=6.6e-54 Score=395.28 Aligned_cols=228 Identities=88% Similarity=1.281 Sum_probs=205.5
Q ss_pred CCCChHHHHHHHHHhCChhhhhhhcCCCCchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEecccccc
Q 026729 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (234)
Q Consensus 3 ~~~~i~D~e~~Ar~~Lp~~~~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~ 82 (234)
+++|++|||+.||++||+.+|+||+||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCCC
Q 026729 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (234)
Q Consensus 83 ~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~ 162 (234)
.+.||+||.++|++|+++|++|++|+++++++|||+++.+++.|||||+.+|++.+.+++++++++||++|+||+|+|+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999987678899999999999999999999999999999999999999
Q ss_pred CchhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCcccc
Q 026729 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 163 G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~ 230 (234)
|+|++|+|++|.+|.+++++++............+..+..++....++.++|++|+|+|+.|++||.+
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~v 230 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILV 230 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEE
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEE
Confidence 99999999999999888777765422221111223334445666779999999999999999999976
No 5
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=2.9e-54 Score=397.82 Aligned_cols=224 Identities=32% Similarity=0.485 Sum_probs=185.8
Q ss_pred CCCCChHHHHHHHHHhCChhhhhhhcCCCCchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEeccccc
Q 026729 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (234)
Q Consensus 2 ~~~~~i~D~e~~Ar~~Lp~~~~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~ 81 (234)
..++|++|||+.||++||+.+|+||+||++||.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+|||||+
T Consensus 11 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~ 90 (368)
T 2nli_A 11 IDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAA 90 (368)
T ss_dssp CCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcC-CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 82 QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG-PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 82 ~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~-~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
+++.||+||.++|++|+++|++|++|+++++++|++++.. .++.|||||+++|++.+.++++||+++||++|+||+|+|
T Consensus 91 ~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p 170 (368)
T 2nli_A 91 HGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADST 170 (368)
T ss_dssp GGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC
T ss_pred ccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 9999999999999999999999999999999999998654 478999999999999999999999999999999999999
Q ss_pred CCCchhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCccccc
Q 026729 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDVM 231 (234)
Q Consensus 161 v~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~~ 231 (234)
+.|+|++|+||+|.+| ++..++... ..+ ...+..+ .++....++.++|++|+|||+.|++||.|-
T Consensus 171 ~~g~r~~d~~~~~~~p--~~~~~~~~~-~~~--~~~g~~l-~~~~~~~d~~~~~~~i~~lr~~~~~PvivK 235 (368)
T 2nli_A 171 VSGNRDRDVKNKFVYP--FGMPIVQRY-LRG--TAEGMSL-NNIYGASKQKISPRDIEEIAGHSGLPVFVK 235 (368)
T ss_dssp ---CBC--------CC--SCCHHHHHH-HTT--SGGGC------CTTBCSBCCHHHHHHHHHHSSSCEEEE
T ss_pred cccchhHHHhhcccCc--chhhhhhcc-ccc--CCCCchH-HhhhhccCchhhHHHHHHHHHHcCCCEEEE
Confidence 9999999999999988 443343210 000 0011122 233334588999999999999999999874
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=3.8e-52 Score=397.92 Aligned_cols=223 Identities=35% Similarity=0.600 Sum_probs=197.2
Q ss_pred CCCChHHHHHHHHHhCChhhhhhhcCCCCchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEecccccc
Q 026729 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (234)
Q Consensus 3 ~~~~i~D~e~~Ar~~Lp~~~~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~ 82 (234)
.++|++|||+.||++||+.+|+||+|||++|.|+++|+++|++|+|+||+|+|++++||+|+|||+++++||+||||+++
T Consensus 121 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~~ 200 (511)
T 1kbi_A 121 NIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALC 200 (511)
T ss_dssp GCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred ccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchhc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCc-hhHHHHHHHHHh--cCCceEeCCCCCCCHHHHHhcC---CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 83 KMAHP-EGEYATARAASA--AGTIMTLSSWSTSSVEEVASTG---PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 83 ~l~~p-~gE~a~AraA~~--~gi~~~lSs~ss~sle~ia~~~---~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
+|.|| +||+++|++|++ +|++|++|++++.|+|+|++.. .++.|||||+.+|++.+.++++||+++||++|+||
T Consensus 201 ~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~it 280 (511)
T 1kbi_A 201 KLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVT 280 (511)
T ss_dssp GGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEE
T ss_pred cccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 99999 999999999999 9999999999999999998754 37899999999999999999999999999999999
Q ss_pred eCCCCCCchhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCccccc
Q 026729 157 VDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDVM 231 (234)
Q Consensus 157 vD~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~~ 231 (234)
||+|+.|+|++|+||+|..|... ...+.+ .......+...++..++++.++|++|+|||+.|++||.|-
T Consensus 281 vd~p~~g~R~~~~r~g~~~p~~~-~~~~~g-----~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK 349 (511)
T 1kbi_A 281 VDAPSLGQREKDMKLKFSNTKAG-PKAMKK-----TNVEESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIK 349 (511)
T ss_dssp CSCSSCCCCHHHHHHHHTTCC--------C-----CCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEE
T ss_pred CCCCCccccHHHHhccCCCCccc-cccccc-----ccccccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEE
Confidence 99999999999999999888531 111110 0001122334455556799999999999999999999874
No 7
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.90 E-value=3.3e-26 Score=211.43 Aligned_cols=187 Identities=10% Similarity=0.061 Sum_probs=140.2
Q ss_pred HHhCChhhhhhhcCCCCchHHHHHHHHhhcccccccc-ccCCCCCCccceeecCcccCcceEecccccccccCchhHHHH
Q 026729 15 KEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPR-ILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYAT 93 (234)
Q Consensus 15 r~~Lp~~~~~Yi~gGa~de~t~~~N~~af~r~~l~pr-vL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~ 93 (234)
..+||+..|+||++|++++ ++|..+|++|+|+|| ++++++++|++|+|+|++++.||++|||+ ++.|+ .+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~--g~~~~----~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSD--ALASP----EF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCT--TTCCH----HH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCC--CcccH----HH
Confidence 3578999999999999999 469999999999998 99999999999999999999999999999 67776 59
Q ss_pred HHHHHhcCCceEeCC--------CCCCCHHHHHhcCC-------CccEEEEeeeC-CHHHHHHHHHHHHHcCCcEEEEee
Q 026729 94 ARAASAAGTIMTLSS--------WSTSSVEEVASTGP-------GIRFFQLYVYK-DRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 94 AraA~~~gi~~~lSs--------~ss~sle~ia~~~~-------~~~wfQlY~~~-d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
|+|++++|.++++|+ .++.++|+|++... .+.|||+|+.+ |++.+.++++|++++|+.+++-
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~~-- 161 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAVR-- 161 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEEE--
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEEE--
Confidence 999999999999998 55678899986432 45799999766 9999999999999999998772
Q ss_pred CCCCCCchhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCcccc
Q 026729 158 DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 158 D~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~ 230 (234)
+.+++..+..+.+.-. +. ..+. ... .. .......+..+|++|.|+|+.|++||.+
T Consensus 162 ---v~~~~~~e~a~~~~~a-ga--d~i~-i~~---~~--------~~~~~~~~~~~~~~i~~l~~~~~~pvi~ 216 (393)
T 2qr6_A 162 ---VSPQNVREIAPIVIKA-GA--DLLV-IQG---TL--------ISAEHVNTGGEALNLKEFIGSLDVPVIA 216 (393)
T ss_dssp ---ECTTTHHHHHHHHHHT-TC--SEEE-EEC---SS--------CCSSCCCC-----CHHHHHHHCSSCEEE
T ss_pred ---eCCccHHHHHHHHHHC-CC--CEEE-EeC---Cc--------cccccCCCcccHHHHHHHHHhcCCCEEE
Confidence 2345666655443100 00 0000 000 00 0011223456999999999999999875
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.82 E-value=1.9e-22 Score=182.52 Aligned_cols=99 Identities=25% Similarity=0.325 Sum_probs=73.1
Q ss_pred hhhhcCCCCchHHHHHHHHhhccccccccccC--CCCCCccceeecCcccCcceEecccccccccCchhH---HHHHHHH
Q 026729 23 FDYYASGAEDQWTLQENRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGE---YATARAA 97 (234)
Q Consensus 23 ~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~--dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE---~a~AraA 97 (234)
.+||..+.+++.|+++|+.+|++|+|+||+|+ +++++|++|+|||++++.||+||||++ .|+++| .++|++|
T Consensus 8 ~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g---~~~~~~~~~~~la~~a 84 (332)
T 1vcf_A 8 RKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTG---GEENGERINLALAEAA 84 (332)
T ss_dssp ---------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEecccc---CCcchhHHHHHHHHHH
Confidence 48999999999999999999999999999999 889999999999999999999999985 377766 7999999
Q ss_pred HhcCCceEeCCCCCCCHHHHHhcCCCccEEEE
Q 026729 98 SAAGTIMTLSSWSTSSVEEVASTGPGIRFFQL 129 (234)
Q Consensus 98 ~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQl 129 (234)
+++|++|++|++++. +|+. ....|||+
T Consensus 85 ~~~G~~~~~~~~~~~-le~~----~~~~~~ql 111 (332)
T 1vcf_A 85 EALGVGMMLGSGRIL-LERP----EALRSFRV 111 (332)
T ss_dssp HHHTCEEEEEECHHH-HHCT----TTHHHHCC
T ss_pred HHcCCCEEeCCchhc-ccCC----CccceEEe
Confidence 999999999999875 7653 34578885
No 9
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.72 E-value=1.7e-17 Score=152.56 Aligned_cols=147 Identities=17% Similarity=0.243 Sum_probs=100.9
Q ss_pred Hhhcccccccccc--CCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHH-
Q 026729 41 NAFSRILFRPRIL--IDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV- 117 (234)
Q Consensus 41 ~af~r~~l~prvL--~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~i- 117 (234)
..|++|+|+|+.| .+++++||+|+|||+++++||+|+||++....+++++.++|++|+++|++|++|+++. .+|+-
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~-~le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYST-ALKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccc-cccCcc
Confidence 6899999999999 6889999999999999999999999999999999999999999999999999999985 34442
Q ss_pred ------HhcCC-CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCCCcCccccccccccC
Q 026729 118 ------ASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (234)
Q Consensus 118 ------a~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~ 190 (234)
.+..| .+.+-.+-.... ..+..+.++.+|++||.+++|... + ...|.
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~---~e~~~~~ve~~~adal~ihln~~q------e----~~~p~------------- 186 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKP---YQAGLQAVRDLQPLFLQVHINLMQ------E----LLMPE------------- 186 (365)
T ss_dssp ------------CCEEEEEETTSC---HHHHHHHHHHHCCSCEEEEECHHH------H----HTSSS-------------
T ss_pred ccceEehhhCCCCcEEEEeCCCCC---HHHHHHHHHhcCCCEEEEeccccc------c----ccCCC-------------
Confidence 11123 333434322111 235566667899999999999531 1 01110
Q ss_pred CCcccCcccHHHHhhhcCCCCC-Ch-HHHHHHHHhCCCccccc
Q 026729 191 KMDEANDSGLAAYVAGQIDRSL-SW-KNILCLYQDFSFECDVM 231 (234)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-tW-~di~wlr~~w~l~~~~~ 231 (234)
-++.+ +| +.|+|||+.|+.||.|-
T Consensus 187 -----------------Gd~~~~~~~~~I~~l~~~~~~PVivK 212 (365)
T 3sr7_A 187 -----------------GEREFRSWKKHLSDYAKKLQLPFILK 212 (365)
T ss_dssp -----------------SCCCCHHHHHHHHHHHHHCCSCEEEE
T ss_pred -----------------CCCcHHHHHHHHHHHHHhhCCCEEEE
Confidence 13445 68 67999999999999875
No 10
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.72 E-value=1.6e-17 Score=150.93 Aligned_cols=150 Identities=22% Similarity=0.220 Sum_probs=111.7
Q ss_pred HHHhhccccccccccC--CCCCCccceeecCcccCcceEeccc-ccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHH
Q 026729 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVE 115 (234)
Q Consensus 39 N~~af~r~~l~prvL~--dv~~~d~sttl~G~~~~~Pi~iaP~-g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle 115 (234)
+..+|++|+|+||+|+ |++++|++|+|||++++.||++||| |+++..++++|.+++++|+++|++|++|++++. +|
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~ 99 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LK 99 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TT
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-cc
Confidence 3678999999999999 7799999999999999999999997 555344578899999999999999999998875 54
Q ss_pred HH---------HhcC-CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCCCcCcccccc
Q 026729 116 EV---------ASTG-PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 185 (234)
Q Consensus 116 ~i---------a~~~-~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p~~~~~~~~~ 185 (234)
++ .... ..+.+.|+....+.+. +.+.++.+|+++|.+++++|.. +..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~~----------~~~~--------- 157 (349)
T 1p0k_A 100 DPSERLSYEIVRKENPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQE----------IVMP--------- 157 (349)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTTT----------C------------
T ss_pred CcccccceehhhhhCCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchhh----------hcCC---------
Confidence 42 3223 3567888864334332 3344567899999999998631 1001
Q ss_pred ccccCCCcccCcccHHHHhhhcCCCCCC--hHHHHHHHHhCCCcccccc
Q 026729 186 GLDLGKMDEANDSGLAAYVAGQIDRSLS--WKNILCLYQDFSFECDVML 232 (234)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t--W~di~wlr~~w~l~~~~~~ 232 (234)
..++.++ |+.|+|+|+.|++||.+.+
T Consensus 158 ---------------------~~~~~~~~~~~~i~~vr~~~~~Pv~vK~ 185 (349)
T 1p0k_A 158 ---------------------EGDRSFSGALKRIEQICSRVSVPVIVKE 185 (349)
T ss_dssp --------------------------CTTHHHHHHHHHHHCSSCEEEEE
T ss_pred ---------------------CCCcchHHHHHHHHHHHHHcCCCEEEEe
Confidence 0033442 4789999999999998863
No 11
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.71 E-value=1.2e-17 Score=153.35 Aligned_cols=111 Identities=15% Similarity=0.130 Sum_probs=98.9
Q ss_pred HhhccccccccccCCCC--CCc--cceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHH
Q 026729 41 NAFSRILFRPRILIDVS--KID--MNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (234)
Q Consensus 41 ~af~r~~l~prvL~dv~--~~d--~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ 116 (234)
.+|++|.|+||++++++ ++| ++|+|+|.+++.||++||| |+.+|..+|+|++++|.++++|+. .|+|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 47999999999999998 765 5559999999999999997 788999999999999999999964 89999
Q ss_pred HHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCC
Q 026729 117 VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (234)
Q Consensus 117 ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv 161 (234)
+++......|+|.|..+++....++++++.++|++ +|++|++.
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvd--vI~id~a~ 122 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGAD--FFCVDVAH 122 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCC--EEEEECSC
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCC--EEEEeCCC
Confidence 99766566799999999999999999999999999 67778764
No 12
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.47 E-value=9.9e-14 Score=127.60 Aligned_cols=118 Identities=16% Similarity=0.105 Sum_probs=86.0
Q ss_pred HhhccccccccccC--CCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCC----C--
Q 026729 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWST----S-- 112 (234)
Q Consensus 41 ~af~r~~l~prvL~--dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss----~-- 112 (234)
+.|++|+|.|+.|. +++++||+|+|||++++.||+|+||++......+.+..+|++|+++|++|++|+++. .
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 56999999999999 778999999999999999999999987544344566789999999999999999942 1
Q ss_pred --CHHHHHhcCC-CccEEEEeeeCCHH-HHHHHHHH-HHHcCCcEEEEeeC
Q 026729 113 --SVEEVASTGP-GIRFFQLYVYKDRN-VVAQLVRR-AERAGFKAIALTVD 158 (234)
Q Consensus 113 --sle~ia~~~~-~~~wfQlY~~~d~~-~~~~li~r-A~~aG~~AlvvTvD 158 (234)
|.+-+.+..| .+.+-.+....-.. ...+.+++ ++.+++.|+.|+++
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln 157 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLN 157 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEec
Confidence 2222443445 45566665521111 11233333 45568899999876
No 13
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.43 E-value=1.7e-14 Score=130.75 Aligned_cols=143 Identities=15% Similarity=0.144 Sum_probs=96.9
Q ss_pred HHHHHHHhhccccccccc--cCCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCC
Q 026729 35 TLQENRNAFSRILFRPRI--LIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS 112 (234)
Q Consensus 35 t~~~N~~af~r~~l~prv--L~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~ 112 (234)
-.-+|..+|++|+|+||+ +++++++|++|+|+|.+++.||++|||++.
T Consensus 8 ~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~------------------------------ 57 (336)
T 1ypf_A 8 HHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTI------------------------------ 57 (336)
T ss_dssp ----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTT------------------------------
T ss_pred ccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCC------------------------------
Confidence 445799999999999999 689999999999999999999999987743
Q ss_pred CHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCCC-cCccccccccccCC
Q 026729 113 SVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP-FLTLKNFQGLDLGK 191 (234)
Q Consensus 113 sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p~-~~~~~~~~~~~~~~ 191 (234)
|.++++++.....|||+|..++++.+.++++++++.|+ .+++| .|.++++++....+.. +..... ... +
T Consensus 58 s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~---~v~v~---~g~~~~~~~~a~~~~~~g~~~~~-i~i---~ 127 (336)
T 1ypf_A 58 IDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGL---IASIS---VGVKEDEYEFVQQLAAEHLTPEY-ITI---D 127 (336)
T ss_dssp CCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTC---CCEEE---ECCSHHHHHHHHHHHHTTCCCSE-EEE---E
T ss_pred ChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCC---eEEEe---CCCCHHHHHHHHHHHhcCCCCCE-EEE---E
Confidence 22444332223358888888888888999999998886 56788 4777777654211000 000000 000 0
Q ss_pred CcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCcccc
Q 026729 192 MDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~ 230 (234)
. . .-++...|+.|+|||+.|+.|+++
T Consensus 128 ~--~-----------~G~~~~~~~~i~~lr~~~~~~~vi 153 (336)
T 1ypf_A 128 I--A-----------HGHSNAVINMIQHIKKHLPESFVI 153 (336)
T ss_dssp C--S-----------SCCSHHHHHHHHHHHHHCTTSEEE
T ss_pred C--C-----------CCCcHHHHHHHHHHHHhCCCCEEE
Confidence 0 0 014557899999999999866554
No 14
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.31 E-value=1.2e-12 Score=121.02 Aligned_cols=113 Identities=16% Similarity=0.252 Sum_probs=67.1
Q ss_pred HhhccccccccccC-CCCCCccceeec-CcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH
Q 026729 41 NAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (234)
Q Consensus 41 ~af~r~~l~prvL~-dv~~~d~sttl~-G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia 118 (234)
.+|++|.|+||++. +++++|++|+|+ |.+++.||++|||++ ++++|++.| ++++|...+++ ++.++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~----~~~~ela~a--~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDT----VTESQMAIA--IAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTT----TCSHHHHHH--HHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCC----CCCHHHHHH--HHHCCCEEEEC--CCCCHHHHH
Confidence 57999999999998 889999999999 999999999999996 667777766 66666666666 578999988
Q ss_pred hcCCCccEEE----EeeeCCHHHHH-HHHHHHHHc----CCcEEEEeeCCCC
Q 026729 119 STGPGIRFFQ----LYVYKDRNVVA-QLVRRAERA----GFKAIALTVDTPR 161 (234)
Q Consensus 119 ~~~~~~~wfQ----lY~~~d~~~~~-~li~rA~~a----G~~AlvvTvD~pv 161 (234)
+..+...|+| +|..+|..+.. +++-..... +++.+..+.|.|.
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~ 133 (404)
T 1eep_A 82 KEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPN 133 (404)
T ss_dssp HHHHHHHTCC--------------------------------------CCTT
T ss_pred HHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcch
Confidence 6543334554 66555543321 222111111 3355555666665
No 15
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.31 E-value=2.7e-12 Score=117.22 Aligned_cols=78 Identities=15% Similarity=0.232 Sum_probs=65.4
Q ss_pred HHHHHHHhhccccccccccC-CC-CCCccceeec-----CcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeC
Q 026729 35 TLQENRNAFSRILFRPRILI-DV-SKIDMNTTVL-----GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS 107 (234)
Q Consensus 35 t~~~N~~af~r~~l~prvL~-dv-~~~d~sttl~-----G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lS 107 (234)
-+++|..+|++|.|+||++. ++ +++|++|+|+ |.+++.||++|||+. .+|.++|+|++++|...+++
T Consensus 14 ~~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~------~~~~~lA~Ava~~Gglg~i~ 87 (351)
T 2c6q_A 14 LVPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDT------VGTFEMAKVLCKFSLFTAVH 87 (351)
T ss_dssp -----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTT------TSCHHHHHHHHHTTCEEECC
T ss_pred ccccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCC------CCcHHHHHHHHHCCCEEEEc
Confidence 46789999999999999987 68 7999999999 999999999999984 56789999999999988887
Q ss_pred CCCCCCHHHHHhc
Q 026729 108 SWSTSSVEEVAST 120 (234)
Q Consensus 108 s~ss~sle~ia~~ 120 (234)
. +.++|++.+.
T Consensus 88 ~--~~s~e~~~~~ 98 (351)
T 2c6q_A 88 K--HYSLVQWQEF 98 (351)
T ss_dssp T--TCCHHHHHHH
T ss_pred C--CCCHHHHHHH
Confidence 5 6788888753
No 16
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.58 E-value=1.2e-07 Score=96.76 Aligned_cols=143 Identities=22% Similarity=0.244 Sum_probs=101.1
Q ss_pred ccccCCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEe-CCCC-------C----------
Q 026729 50 PRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS-------T---------- 111 (234)
Q Consensus 50 prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~l-Ss~s-------s---------- 111 (234)
|..-..+..+|++++++|.+++.||++||+++. ++..+++++...|..+++ .|.+ +
T Consensus 522 p~~~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~------~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~ 595 (1025)
T 1gte_A 522 PLFYTPVDLVDISVEMAGLKFINPFGLASAAPT------TSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTT 595 (1025)
T ss_dssp CCCCCGGGGCCCCEEETTEEESSSEEECSSGGG------SSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCT
T ss_pred cccccccccccceeeeccccccCcccccCCCCC------CCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccc
Confidence 333335578899999999999999999998763 345567778888888886 1111 1
Q ss_pred --------------------CC-------HHHHHhcCC-CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCCCC
Q 026729 112 --------------------SS-------VEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLG 163 (234)
Q Consensus 112 --------------------~s-------le~ia~~~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~G 163 (234)
.+ ++++.+..+ .+.|+|++...|.+...+++++++++|+++|.|++.+|..
T Consensus 596 ~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~- 674 (1025)
T 1gte_A 596 SGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG- 674 (1025)
T ss_dssp TCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-
T ss_pred cccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-
Confidence 11 234444444 6789999888899999999999999999999999998852
Q ss_pred chhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCcccccc
Q 026729 164 RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDVML 232 (234)
Q Consensus 164 ~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~~~ 232 (234)
.++++ + +.. -..++.+.|+.++|+|+.+++||.|.+
T Consensus 675 ~~~~~----~-----------------------G~~------~~~~~~~~~~iv~~v~~~~~~Pv~vK~ 710 (1025)
T 1gte_A 675 MGERG----M-----------------------GLA------CGQDPELVRNICRWVRQAVQIPFFAKL 710 (1025)
T ss_dssp CC--------------------------------SB------GGGCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCCC----c-----------------------ccc------cccCHHHHHHHHHHHHHhhCCceEEEe
Confidence 11110 0 000 012455678899999999999988743
No 17
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.35 E-value=2.1e-07 Score=83.55 Aligned_cols=164 Identities=14% Similarity=0.171 Sum_probs=94.7
Q ss_pred cccccccccCCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCc
Q 026729 45 RILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGI 124 (234)
Q Consensus 45 r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~ 124 (234)
++.+.|.. . ...+|++++++|.+++.||++|+ |+ +.++| .++++++.|+.++++ .+.+++.. ...+.+
T Consensus 31 ~~~~~~~~-~-~~~~~l~~~i~g~~l~npi~~aa-g~----~~~~~--~~~~~a~~G~g~i~~--~~~~~~~~-~g~~~p 98 (336)
T 1f76_A 31 GTPFEALV-R-QKVPAKPVNCMGLTFKNPLGLAA-GL----DKDGE--CIDALGAMGFGSIEI--GTVTPRPQ-PGNDKP 98 (336)
T ss_dssp TSGGGGGT-C-CCCCCCCEEETTEEESSSEEECT-TS----STTCC--CHHHHHHTTCSEEEE--EEECSSCB-CCSCSC
T ss_pred cCCccccc-c-CCCCCCCeEECCEEcCCCcEeCc-cc----CCcHH--HHHHHHHcCccEEEe--CCCCCCCC-CCCCCc
Confidence 34455533 2 23489999999999999999994 32 55666 778888999998754 33444433 223467
Q ss_pred cEEEEe----ee-----CCHHHHHHHHHHHHHcCCc-EEEEee----CCCCCCchhhHhhccCCC-CCcCcccccccccc
Q 026729 125 RFFQLY----VY-----KDRNVVAQLVRRAERAGFK-AIALTV----DTPRLGRREADIKNRFTL-PPFLTLKNFQGLDL 189 (234)
Q Consensus 125 ~wfQlY----~~-----~d~~~~~~li~rA~~aG~~-AlvvTv----D~pv~G~Re~d~r~~f~~-p~~~~~~~~~~~~~ 189 (234)
+|||+| +. .+.+ ...+++++++++++ .+++++ |++.. ....|.+..+.. ..+.. .....+
T Consensus 99 r~~~~~~d~~~in~~g~~~~g-~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~-~~~~~~~~aa~~~~~g~d---~iein~ 173 (336)
T 1f76_A 99 RLFRLVDAEGLINRMGFNNLG-VDNLVENVKKAHYDGVLGINIGKNKDTPVE-QGKDDYLICMEKIYAYAG---YIAINI 173 (336)
T ss_dssp CEEEETTTTEEEECCCCCBCC-HHHHHHHHHHCCCCSEEEEEECCCTTSCGG-GTHHHHHHHHHHHGGGCS---EEEEEC
T ss_pred ceeeccccceeeecCCCCCcC-HHHHHHHHHhcccCCcEEEEecCCCCCccc-ccHHHHHHHHHHHhccCC---EEEEEc
Confidence 999998 11 1122 36677777777765 688887 22211 124444433311 00000 000011
Q ss_pred CCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhC---------CCcccccc
Q 026729 190 GKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDF---------SFECDVML 232 (234)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w---------~l~~~~~~ 232 (234)
. .+. ..+ .+. ..++.+.|+.++++|+.+ +.||.|.+
T Consensus 174 ~--sP~-~~g-~~~---~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi 218 (336)
T 1f76_A 174 S--SPN-TPG-LRT---LQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI 218 (336)
T ss_dssp C--CSS-STT-GGG---GGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred c--CCC-CCC-ccc---ccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEe
Confidence 0 000 001 111 224677899999999999 89987754
No 18
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=97.80 E-value=5.7e-05 Score=66.78 Aligned_cols=97 Identities=15% Similarity=0.186 Sum_probs=59.6
Q ss_pred CccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeC-CCCC--------------------------
Q 026729 59 IDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWST-------------------------- 111 (234)
Q Consensus 59 ~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lS-s~ss-------------------------- 111 (234)
+|++++++|.+++.||++|+..+ +.++|. .+.+.+.|+.+++. +.+.
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~----~~~~~~--~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVL----CSTEED--LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSS----CSSHHH--HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCCC----CCCHHH--HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 58999999999999999997332 334544 46688999988653 2221
Q ss_pred CCHH----HHHhc-C--CCccEEEEeeeCCHHHHHHHHHHHHHcCCc---EEEEeeCCCCC
Q 026729 112 SSVE----EVAST-G--PGIRFFQLYVYKDRNVVAQLVRRAERAGFK---AIALTVDTPRL 162 (234)
Q Consensus 112 ~sle----~ia~~-~--~~~~wfQlY~~~d~~~~~~li~rA~~aG~~---AlvvTvD~pv~ 162 (234)
..++ .+... . ..+...|+. -.+.+...+.+++++++|++ +|.|++-+|..
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~ 135 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV 135 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC
Confidence 1122 22221 1 234556664 23445556666777777777 67776665543
No 19
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=97.76 E-value=2e-05 Score=70.31 Aligned_cols=122 Identities=16% Similarity=0.070 Sum_probs=83.7
Q ss_pred ccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCC---------CHHHHHhcCCCccEEEEeeeCCHHHHH
Q 026729 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS---------SVEEVASTGPGIRFFQLYVYKDRNVVA 139 (234)
Q Consensus 69 ~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~---------sle~ia~~~~~~~wfQlY~~~d~~~~~ 139 (234)
++..||++|||+. +. +....+.+++.|..++++-+.+. .++.+....+.+.++||+ -.+.+...
T Consensus 2 ~l~nri~~APM~~--~t----~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAG--YT----DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTT--TC----SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCC--CC----cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 4678999999984 32 35677888888888887765421 122331122368899998 67888888
Q ss_pred HHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHH
Q 026729 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILC 219 (234)
Q Consensus 140 ~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~w 219 (234)
+..++|+++ |++|-|++.+|....|. .++ +.+ -..++.+.|+.|++
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~-----------------------G~~------l~~~~~~~~eiv~~ 120 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVK----EGA-----------------------GGA------LLKDLRHFRYIVRE 120 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHH----TTC-----------------------GGG------GGSCHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCC----CCc-----------------------ccc------hhhCHHHHHHHHHH
Confidence 999999999 99999999998642221 111 000 11256678899999
Q ss_pred HHHhCCCccccc
Q 026729 220 LYQDFSFECDVM 231 (234)
Q Consensus 220 lr~~w~l~~~~~ 231 (234)
+|+.++.||.|-
T Consensus 121 v~~~~~~pv~vK 132 (318)
T 1vhn_A 121 LRKSVSGKFSVK 132 (318)
T ss_dssp HHHHCSSEEEEE
T ss_pred HHHhhCCCEEEE
Confidence 999999998775
No 20
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.50 E-value=0.00035 Score=63.76 Aligned_cols=102 Identities=18% Similarity=0.239 Sum_probs=69.6
Q ss_pred hhccccccccccCCC--CCCccceeec-CcccCcceEecccccccccCchhHHHHHHHHH-hcCCceEeCCCCCCCHHHH
Q 026729 42 AFSRILFRPRILIDV--SKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAAS-AAGTIMTLSSWSTSSVEEV 117 (234)
Q Consensus 42 af~r~~l~prvL~dv--~~~d~sttl~-G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~-~~gi~~~lSs~ss~sle~i 117 (234)
.|+++.|+|. +.++ +++|++|+|. +..+..||+.+||+.. .|..+|.+.+ +-|+.++-. +.+.+++
T Consensus 14 ~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~v------t~~~lA~avA~~GGlgii~~---~~s~e~~ 83 (361)
T 3khj_A 14 TFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTV------TEHLMAVGMARLGGIGIIHK---NMDMESQ 83 (361)
T ss_dssp CGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTT------CSHHHHHHHHHTTCEEEECS---SSCHHHH
T ss_pred CcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCC------CcHHHHHHHHHcCCCeEEec---CCCHHHH
Confidence 5999999998 6766 5789999998 7899999999999843 2346676544 455555543 4555554
Q ss_pred Hh-------cCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 118 AS-------TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 118 a~-------~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
.+ ....+.-..+.... .+.++.+.++|++.|+| |+.
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~~-----~e~a~~l~eaGad~I~l--d~a 126 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVNE-----IERAKLLVEAGVDVIVL--DSA 126 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTTC-----HHHHHHHHHTTCSEEEE--CCS
T ss_pred HHHHHHHHhccCceEEEEeCCCH-----HHHHHHHHHcCcCeEEE--eCC
Confidence 32 12234456664422 67788888999997654 444
No 21
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=97.47 E-value=0.0006 Score=60.07 Aligned_cols=41 Identities=22% Similarity=0.136 Sum_probs=30.5
Q ss_pred cceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeC
Q 026729 61 MNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS 107 (234)
Q Consensus 61 ~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lS 107 (234)
++++++|.+++.||++||.. .+.++| ..+.+.+.|..+++.
T Consensus 2 l~~~i~g~~l~npv~~Aag~----~~~~~~--~~~~~~~~G~g~i~~ 42 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGV----HCMTIE--DLEELKASQAGAYIT 42 (311)
T ss_dssp CCEEETTEEESSSEEECTTS----SCSSHH--HHHHHHHSSCSCCBC
T ss_pred CceEECCEEcCCCcEECCCC----CCCCHH--HHHHHHHCCCCEEEe
Confidence 68999999999999999622 233454 446788888887764
No 22
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=97.39 E-value=0.0001 Score=64.61 Aligned_cols=98 Identities=18% Similarity=0.253 Sum_probs=63.1
Q ss_pred CCCccceeecCcccCcceEecccccccccCchhHHHHHHHH--HhcCCceE-----------------------eCCCC-
Q 026729 57 SKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAA--SAAGTIMT-----------------------LSSWS- 110 (234)
Q Consensus 57 ~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA--~~~gi~~~-----------------------lSs~s- 110 (234)
+++|++++++|.+++.||++|| |+.+... +. .+.+ ..+|...+ +++.+
T Consensus 3 ~~~~l~~~~~g~~l~npi~~aa-g~~~~~~---~~--~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~ 76 (311)
T 1ep3_A 3 ENNRLSVKLPGLDLKNPIIPAS-GCFGFGE---EY--AKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGL 76 (311)
T ss_dssp CCTTTCEEETTEEESSSEEECT-TSSTTST---TG--GGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCC
T ss_pred CCCccceEECCEECCCCcEECC-CCCCCCH---HH--HHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCC
Confidence 6789999999999999999999 3322211 11 2332 34453331 22322
Q ss_pred -CCCHHHH--------HhcC-CCccEEEEeeeCCHHHHHHHHHHHHH-cCCcEEEEeeCCCC
Q 026729 111 -TSSVEEV--------ASTG-PGIRFFQLYVYKDRNVVAQLVRRAER-AGFKAIALTVDTPR 161 (234)
Q Consensus 111 -s~sle~i--------a~~~-~~~~wfQlY~~~d~~~~~~li~rA~~-aG~~AlvvTvD~pv 161 (234)
+.+.+++ .+.. ..+...||.. .+.+...+..+++++ +|+++|-|++.+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~-~~~~~~~~~a~~~~~~~g~d~iei~~~~p~ 137 (311)
T 1ep3_A 77 QNPGLEVIMTEKLPWLNENFPELPIIANVAG-SEEADYVAVCAKIGDAANVKAIELNISCPN 137 (311)
T ss_dssp CBCCHHHHHHTHHHHHHHHCTTSCEEEEECC-SSHHHHHHHHHHHTTSTTEEEEEEECCSEE
T ss_pred CCcCHHHHHHHHHHHHHhcCCCCcEEEEEcC-CCHHHHHHHHHHHhccCCCCEEEEeCCCCC
Confidence 3343333 2213 4678899964 356667788888888 99999999987765
No 23
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.02 E-value=0.00071 Score=59.25 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=73.3
Q ss_pred cCCceEeCCCCCCCHHH------HHhc-CCCccEEEEeee-------CCHHHHHHHHHHHHHcCCcEEEEeeCCCCCCch
Q 026729 100 AGTIMTLSSWSTSSVEE------VAST-GPGIRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRR 165 (234)
Q Consensus 100 ~gi~~~lSs~ss~sle~------ia~~-~~~~~wfQlY~~-------~d~~~~~~li~rA~~aG~~AlvvTvD~pv~G~R 165 (234)
.|+.+.--|.+-++-|| ++.. ..+..|+||++. .|...+.+..++.++.|++.+.+++|.|+.++|
T Consensus 72 ~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akr 151 (265)
T 1wv2_A 72 DRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQ 151 (265)
T ss_dssp TTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHH
T ss_pred cCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 34444444444455544 2333 446679999998 666677777777777799999999999999999
Q ss_pred hhHhhccCCCCCcCccccccccccCCCcccCcccHHHHhhhcCCCCCChHHHHHHHHhCCCcccc
Q 026729 166 EADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 166 e~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~ 230 (234)
..+....+-+|.... . +.+ ..-.+|+-|+.|++.-++||.+
T Consensus 152 l~~~G~~aVmPlg~p--------I-----GsG-----------~Gi~~~~lI~~I~e~~~vPVI~ 192 (265)
T 1wv2_A 152 LAEIGCIAVMPLAGL--------I-----GSG-----------LGICNPYNLRIILEEAKVPVLV 192 (265)
T ss_dssp HHHSCCSEEEECSSS--------T-----TCC-----------CCCSCHHHHHHHHHHCSSCBEE
T ss_pred HHHhCCCEEEeCCcc--------C-----CCC-----------CCcCCHHHHHHHHhcCCCCEEE
Confidence 999887765552110 0 000 1123789999999999999865
No 24
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.68 E-value=0.0042 Score=56.71 Aligned_cols=106 Identities=20% Similarity=0.197 Sum_probs=67.7
Q ss_pred hhccccccccccCCC--CCCccceeec-CcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH
Q 026729 42 AFSRILFRPRILIDV--SKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (234)
Q Consensus 42 af~r~~l~prvL~dv--~~~d~sttl~-G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia 118 (234)
.|+++.|+|. +.++ +++|++|+|. +..+..||+.|||+.. .|..+|.+.+++|-.-++.. +.+.|+..
T Consensus 15 ~fddv~lvp~-~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~v------s~~~lA~avA~aGGlg~i~~--~~s~e~~~ 85 (366)
T 4fo4_A 15 TFDDVLLVPA-HSTVLPNTADLRTRLTKNIALNIPMVSASMDTV------TEARLAIALAQEGGIGFIHK--NMSIEQQA 85 (366)
T ss_dssp CGGGEEECCC-CCCCCGGGCBCCEEEETTEEESSSEEECCCTTT------CSHHHHHHHHHTTCEEEECS--SSCHHHHH
T ss_pred CcceEEEECC-CCCCChhhcccceecccccccCCCEEeCCCCCC------ChHHHHHHHHHcCCceEeec--CCCHHHHH
Confidence 5899999998 5555 4789999998 6889999999999843 24567766666555444442 45666643
Q ss_pred hcC----C-CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 119 STG----P-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 119 ~~~----~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
+.. . ++.-..+=+.-+ ....+.++.+.++|++.|+|+.
T Consensus 86 ~~i~~vk~~~~l~vga~vg~~-~~~~~~~~~lieaGvd~I~idt 128 (366)
T 4fo4_A 86 AQVHQVKISGGLRVGAAVGAA-PGNEERVKALVEAGVDVLLIDS 128 (366)
T ss_dssp HHHHHHHTTTSCCCEEECCSC-TTCHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHhcCceeEEEEeccC-hhHHHHHHHHHhCCCCEEEEeC
Confidence 211 1 122222211111 1245778888899999877753
No 25
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.91 E-value=0.13 Score=45.35 Aligned_cols=89 Identities=21% Similarity=0.223 Sum_probs=59.8
Q ss_pred eeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHH-------HhcCCCccEEEEeeeC--
Q 026729 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYK-- 133 (234)
Q Consensus 63 ttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~i-------a~~~~~~~wfQlY~~~-- 133 (234)
+++|| +..||+.+||++ +. +..++.++.++|..-++...+..+.+++ .+..+.+.-.+++...
T Consensus 9 ~~~l~--~~~Pii~apM~g--vs----~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 9 TETFG--VEHPIMQGGMQW--VG----RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQ 80 (328)
T ss_dssp HHHHT--CSSSEEECCCTT--TC----SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS
T ss_pred HHHhC--CCCCEEECCCCC--CC----cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 55665 578999999963 33 3458888888886555544333335443 2223345678888852
Q ss_pred -CHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 134 -DRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 134 -d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
++. ..+.++.+.++|++.|.++.+.|
T Consensus 81 ~~~~-~~~~~~~~~~~g~d~V~~~~g~p 107 (328)
T 2gjl_A 81 KPVP-YAEYRAAIIEAGIRVVETAGNDP 107 (328)
T ss_dssp SCCC-HHHHHHHHHHTTCCEEEEEESCC
T ss_pred cCcc-HHHHHHHHHhcCCCEEEEcCCCc
Confidence 122 46788899999999999998876
No 26
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=94.85 E-value=0.065 Score=47.64 Aligned_cols=87 Identities=23% Similarity=0.200 Sum_probs=57.4
Q ss_pred eeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH-------hcCCCccEEEEeeeCCH
Q 026729 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STGPGIRFFQLYVYKDR 135 (234)
Q Consensus 63 ttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia-------~~~~~~~wfQlY~~~d~ 135 (234)
+++|| +..||+.+||++ +.. ..+++++.++|..-++.+. ..+.+++. +..+.+...|++... .
T Consensus 6 ~~~l~--~~~Pii~apM~g--~s~----~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~-~ 75 (332)
T 2z6i_A 6 TELLK--IDYPIFQGGMAW--VAD----GDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLLS-P 75 (332)
T ss_dssp HHHHT--CSSSEEECCCTT--TCC----HHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTTS-T
T ss_pred hHHhC--CCCCEEeCCCCC--CCc----HHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCCC-C
Confidence 44566 788999999983 433 4477778888864444332 23444332 223356678987632 2
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 136 NVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
. ..+.++++.++|++.|.++.+.|
T Consensus 76 ~-~~~~~~~a~~~g~d~V~~~~g~p 99 (332)
T 2z6i_A 76 F-VEDIVDLVIEEGVKVVTTGAGNP 99 (332)
T ss_dssp T-HHHHHHHHHHTTCSEEEECSSCG
T ss_pred C-HHHHHHHHHHCCCCEEEECCCCh
Confidence 2 45788999999999999998766
No 27
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=94.53 E-value=0.058 Score=48.39 Aligned_cols=44 Identities=14% Similarity=0.120 Sum_probs=30.4
Q ss_pred CCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceE
Q 026729 56 VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT 105 (234)
Q Consensus 56 v~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~ 105 (234)
-.+.|++|++||.+++-||++|. +.++.++|.. ++..+.|..++
T Consensus 32 ~~~~~L~v~~~Gl~f~NPvglAa----G~~~~~~e~~--~~l~~~G~G~v 75 (354)
T 3tjx_A 32 RGSMSLQVNLLNNTFANPFMNAA----GVMCTTTEEL--VAMTESASGSL 75 (354)
T ss_dssp -CCCCCCEEETTEEESSSEEECT----TSSCSSHHHH--HHHHHSSCSCE
T ss_pred CCCCceeEEECCEEcCCCcEEcc----CCCCCCHHHH--HHHHHcCCCEE
Confidence 35789999999999999999985 3345566654 44444554433
No 28
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=94.43 E-value=0.13 Score=46.64 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=62.7
Q ss_pred cccccCCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEe-CCCC-----------------
Q 026729 49 RPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS----------------- 110 (234)
Q Consensus 49 ~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~l-Ss~s----------------- 110 (234)
.|+--..+..+|++|+++|.++.-||++|.-.. -.++| ..++....|..+++ .|..
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~----~~~~e--~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~ 98 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAAGVM----CTTTE--ELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL 98 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECTTSS----CSSHH--HHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEeccCCC----CCCHH--HHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecch
Confidence 455555678899999999999999999976221 12233 34555555554432 1211
Q ss_pred ---------CCCHHH----HHhc--C-CCccEEEEeeeCCHHHHHHHHHHHH---HcCCcEEEEeeCCCCC
Q 026729 111 ---------TSSVEE----VAST--G-PGIRFFQLYVYKDRNVVAQLVRRAE---RAGFKAIALTVDTPRL 162 (234)
Q Consensus 111 ---------s~sle~----ia~~--~-~~~~wfQlY~~~d~~~~~~li~rA~---~aG~~AlvvTvD~pv~ 162 (234)
+..+|. +.+. . ..+...||. -.+.+...+.+++++ ++|+++|.|.+=+|..
T Consensus 99 ~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~ 168 (354)
T 4ef8_A 99 GSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV 168 (354)
T ss_dssp EEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS
T ss_pred hhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC
Confidence 233444 3322 1 246788884 346666677777777 5789999999988864
No 29
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.26 E-value=0.33 Score=43.54 Aligned_cols=85 Identities=16% Similarity=0.176 Sum_probs=57.4
Q ss_pred cCcceEecccccccccCchhHHHHHHHHHhcCC-ceEeCCCCCC-CH-----HHHHhcC--CCccEEEEeeeCCHHHHHH
Q 026729 70 ISMPIMIAPTAMQKMAHPEGEYATARAASAAGT-IMTLSSWSTS-SV-----EEVASTG--PGIRFFQLYVYKDRNVVAQ 140 (234)
Q Consensus 70 ~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi-~~~lSs~ss~-sl-----e~ia~~~--~~~~wfQlY~~~d~~~~~~ 140 (234)
+.-||++|||++ . .+..+...+.+.|- .++++-+.+. .+ +.+.+.. +.+...||+ -.+.+...+
T Consensus 2 l~nriv~APM~g--~----td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVD--R----TDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTT--T----SSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHH
T ss_pred CCCCEEECCCCC--C----CHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHH
Confidence 567999999984 2 23444445555553 4554443321 11 2344322 367899998 467788888
Q ss_pred HHHHHHHcCCcEEEEeeCCCC
Q 026729 141 LVRRAERAGFKAIALTVDTPR 161 (234)
Q Consensus 141 li~rA~~aG~~AlvvTvD~pv 161 (234)
..++++++||+.|-|+..+|.
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~ 95 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPS 95 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCS
T ss_pred HHHHHHHcCCCEEEECCcCCC
Confidence 999999999999999999887
No 30
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=89.21 E-value=1.7 Score=38.92 Aligned_cols=84 Identities=13% Similarity=0.112 Sum_probs=55.9
Q ss_pred CcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH-------hcCCCccEEEEeeeCCH--------
Q 026729 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STGPGIRFFQLYVYKDR-------- 135 (234)
Q Consensus 71 ~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia-------~~~~~~~wfQlY~~~d~-------- 135 (234)
..||+.+||++ ++ .+..+|.++.++|-.-++++ +..+.|++. +..+.+.-.|++...+.
T Consensus 10 ~~Pii~apMag-gv----s~~~la~av~~aGglG~i~~-~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~ 83 (369)
T 3bw2_A 10 PLPIVQAPMAG-GV----SVPQLAAAVCEAGGLGFLAA-GYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVE 83 (369)
T ss_dssp SSSEEECCCTT-TT----SCHHHHHHHHHTTSBEEEEC-TTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHH
T ss_pred cCCEEeCCCCC-CC----CcHHHHHHHHHCCCEEEcCC-CCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHH
Confidence 88999999985 22 34567888888887666654 334555442 22334445666654431
Q ss_pred -------------------------HHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 136 -------------------------NVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 136 -------------------------~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
....+.++.+.++|++.+.++...|
T Consensus 84 ~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~ 133 (369)
T 3bw2_A 84 VYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVP 133 (369)
T ss_dssp HHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCC
T ss_pred HHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCC
Confidence 1135677888899999999998876
No 31
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=88.99 E-value=2.2 Score=37.58 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=53.4
Q ss_pred ccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH-------hcCCCccEEEEeeeCCHHHHHHH
Q 026729 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQL 141 (234)
Q Consensus 69 ~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia-------~~~~~~~wfQlY~~~d~~~~~~l 141 (234)
.+..||+.+||++ +.. ..++.++.++|..-+++. ...+.+++. +....+.-.++... +.. ..+.
T Consensus 24 ~~~~Pii~apM~g--vs~----~~la~av~~aGglG~i~~-~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~~-~~~~ 94 (326)
T 3bo9_A 24 EIEHPILMGGMAW--AGT----PTLAAAVSEAGGLGIIGS-GAMKPDDLRKAISELRQKTDKPFGVNIILV-SPW-ADDL 94 (326)
T ss_dssp TCSSSEEECCCTT--TSC----HHHHHHHHHTTSBEEEEC-TTCCHHHHHHHHHHHHTTCSSCEEEEEETT-STT-HHHH
T ss_pred CCCCCEEECCCCC--CCC----HHHHHHHHhCCCcEEeCC-CCCCHHHHHHHHHHHHHhcCCCEEEEEecc-CCC-HHHH
Confidence 4678999999984 333 457888888886555543 223454432 22223445666542 222 4678
Q ss_pred HHHHHHcCCcEEEEeeCCC
Q 026729 142 VRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 142 i~rA~~aG~~AlvvTvD~p 160 (234)
++.+.++|++.|.++.+.|
T Consensus 95 ~~~~~~~g~d~V~l~~g~p 113 (326)
T 3bo9_A 95 VKVCIEEKVPVVTFGAGNP 113 (326)
T ss_dssp HHHHHHTTCSEEEEESSCC
T ss_pred HHHHHHCCCCEEEECCCCc
Confidence 8888899999999988866
No 32
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=88.87 E-value=4 Score=36.61 Aligned_cols=96 Identities=13% Similarity=0.148 Sum_probs=64.3
Q ss_pred CccceeecCcccCcceEecccccccccCchh-HHHHHHHHHhcCCceEeC-CCC--------------------------
Q 026729 59 IDMNTTVLGFKISMPIMIAPTAMQKMAHPEG-EYATARAASAAGTIMTLS-SWS-------------------------- 110 (234)
Q Consensus 59 ~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~g-E~a~AraA~~~gi~~~lS-s~s-------------------------- 110 (234)
.|++|+++|.++.-||++|. + +++ .....+.+...|..+++. |.+
T Consensus 36 ~~L~~~~~Gl~~~NPv~lAa----G---~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~ 108 (345)
T 3oix_A 36 VSTHTTIGSFDFDNCLMNAA----G---VYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLP 108 (345)
T ss_dssp CCCCEEETTEEESCSEEECT----T---SSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCC
T ss_pred CCcCeEECCEECCCCCEEcC----C---CCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCC
Confidence 58999999999999999983 2 221 223455566666655543 222
Q ss_pred CCCH----HHHHh---c-CCCccEEEEeeeCCHHHHHHHHHHHHHcCCc-EEEEeeCCCCC
Q 026729 111 TSSV----EEVAS---T-GPGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRL 162 (234)
Q Consensus 111 s~sl----e~ia~---~-~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~-AlvvTvD~pv~ 162 (234)
+..+ +++.+ . ...+...||. -.+.+...+..++++++|+. +|.|.+=+|..
T Consensus 109 n~G~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~ 168 (345)
T 3oix_A 109 NLGINYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNV 168 (345)
T ss_dssp BSCHHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCS
T ss_pred ChhHHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCc
Confidence 1223 33432 1 2357889995 34667777888888889988 99999998863
No 33
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=88.86 E-value=0.82 Score=39.29 Aligned_cols=84 Identities=14% Similarity=0.115 Sum_probs=46.4
Q ss_pred ccEEEEeeeCCH----HHHHHHHHHHHHc---CCcEEEEeeCCCCCCchhhHhhccCCCCCcCccccccccccCCCcccC
Q 026729 124 IRFFQLYVYKDR----NVVAQLVRRAERA---GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN 196 (234)
Q Consensus 124 ~~wfQlY~~~d~----~~~~~li~rA~~a---G~~AlvvTvD~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~ 196 (234)
..|+||++..|. +...+++++|++. |...++++++++...++-.+...+|-++ . .... +
T Consensus 94 ~~~i~l~i~~d~~~~~~e~~~~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~----~--------~~~~--G 159 (264)
T 1xm3_A 94 CDMIKVEVIGCSRSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMP----G--------ASPI--G 159 (264)
T ss_dssp CSSEEECCBCCTTTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEE----C--------SSST--T
T ss_pred CCeEEEeecCCCcccccchHHHHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEE----C--------Cccc--C
Confidence 457888776654 2345777777777 8888777776543222222222222100 0 0000 0
Q ss_pred cccHHHHhhhcCCCCCChHHHHHHHHhCCCccccc
Q 026729 197 DSGLAAYVAGQIDRSLSWKNILCLYQDFSFECDVM 231 (234)
Q Consensus 197 ~~~~~~~~~~~~~~~~tW~di~wlr~~w~l~~~~~ 231 (234)
.. ....+|+.++++|+.+++||++.
T Consensus 160 ---------t~-~~~~~~~~l~~i~~~~~iPviv~ 184 (264)
T 1xm3_A 160 ---------SG-QGILNPLNLSFIIEQAKVPVIVD 184 (264)
T ss_dssp ---------CC-CCCSCHHHHHHHHHHCSSCBEEE
T ss_pred ---------CC-CCCCCHHHHHHHHhcCCCCEEEE
Confidence 00 01125889999999999999864
No 34
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=88.76 E-value=0.45 Score=43.82 Aligned_cols=69 Identities=16% Similarity=0.245 Sum_probs=52.4
Q ss_pred hhccccccccccC-CCCCCccceeecC-cccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH
Q 026729 42 AFSRILFRPRILI-DVSKIDMNTTVLG-FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (234)
Q Consensus 42 af~r~~l~prvL~-dv~~~d~sttl~G-~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia 118 (234)
.|+++.|+|..-. ..+++|++|.|-. ..+..||+-|||+. . .+..+|.|.+++|-.-+++. ..++|+++
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~--V----s~~~lA~Ava~aGGlGvi~~--~~~~e~~~ 81 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDT--V----TEHLMAVGMARLGGIGIIHK--NMDMESQV 81 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTT--T----CSSHHHHHHHTTTCEEEECS--SSCHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCC--c----CcHHHHHHHHHCCCEEEeCC--CCCHHHHH
Confidence 4899999997532 2257899999864 67899999999983 3 34467888888888888874 67777665
No 35
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=87.10 E-value=0.44 Score=50.52 Aligned_cols=81 Identities=14% Similarity=0.078 Sum_probs=53.6
Q ss_pred hccccccccccCCC--CCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhc
Q 026729 43 FSRILFRPRILIDV--SKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAST 120 (234)
Q Consensus 43 f~r~~l~prvL~dv--~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~ 120 (234)
|+.+.+.+..+..+ +++|+.+ .+..||+++||++..+ .++...++|+||.++|+.+.++..+ .+.|+....
T Consensus 825 ~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~~~~~ 897 (1479)
T 1ea0_A 825 LRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGG-EDPARFRPD 897 (1479)
T ss_dssp GGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTC-CCGGGSSBC
T ss_pred hhhhhhccCCCCCCCcccccccc-----cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHHhhhc
Confidence 44555444443332 3455555 7899999999997655 6688999999999999998888654 455554311
Q ss_pred --C--CCccEEEEe
Q 026729 121 --G--PGIRFFQLY 130 (234)
Q Consensus 121 --~--~~~~wfQlY 130 (234)
. ......|+.
T Consensus 898 ~~g~~~~~~IrQ~a 911 (1479)
T 1ea0_A 898 KNGDNWNSAIKQVA 911 (1479)
T ss_dssp TTSCBCCCSEEEEC
T ss_pred cccchhhhhhhhhc
Confidence 1 122467765
No 36
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=77.87 E-value=1.6 Score=46.53 Aligned_cols=47 Identities=13% Similarity=0.038 Sum_probs=37.9
Q ss_pred ccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHH
Q 026729 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (234)
Q Consensus 69 ~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~i 117 (234)
.+..||+++||++..+ -++...++|+||.++|+.+.++..+. +.+..
T Consensus 865 ~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg~-~pe~~ 911 (1520)
T 1ofd_A 865 SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGGE-DVVRY 911 (1520)
T ss_dssp HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTCC-CGGGG
T ss_pred cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCCC-CHHHH
Confidence 7899999999997654 45788999999999999999987653 44433
No 37
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=75.41 E-value=18 Score=31.79 Aligned_cols=22 Identities=18% Similarity=0.350 Sum_probs=17.9
Q ss_pred ceeecCcccCcceEeccccccc
Q 026729 62 NTTVLGFKISMPIMIAPTAMQK 83 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~~~ 83 (234)
..+|=|.++.-+|++|||+...
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~ 29 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYS 29 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCC
T ss_pred CeeECCEEEcCccEECCcCCCc
Confidence 3667778999999999998654
No 38
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=69.38 E-value=43 Score=29.77 Aligned_cols=45 Identities=13% Similarity=0.112 Sum_probs=29.3
Q ss_pred eeecCcccCcceEecccccccccCchh---HHHHHHHHHhcCCceEeC
Q 026729 63 TTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLS 107 (234)
Q Consensus 63 ttl~G~~~~~Pi~iaP~g~~~l~~p~g---E~a~AraA~~~gi~~~lS 107 (234)
.+|=+.++.-.|++|||+...-..++| |..+.--++.+|..++++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiit 56 (364)
T 1vyr_A 9 LKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIIS 56 (364)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEE
T ss_pred eeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 566677888999999998653213343 555555566666666654
No 39
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=68.26 E-value=20 Score=30.77 Aligned_cols=82 Identities=11% Similarity=-0.005 Sum_probs=50.1
Q ss_pred CcceEecccccccccCchhHHHHHHHHHhcCCc-eEeCCCCC----------CCHH---HHH----hcCCCccEEEEeee
Q 026729 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-MTLSSWST----------SSVE---EVA----STGPGIRFFQLYVY 132 (234)
Q Consensus 71 ~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~-~~lSs~ss----------~sle---~ia----~~~~~~~wfQlY~~ 132 (234)
..|++++-.+ ..++.-...|+.+.++|.- ++-=..++ .+.| ++. +..+-|.+..++..
T Consensus 93 ~~p~~~~i~g----~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAG----MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECC----SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCC----CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 4676665432 1234445677888888755 33222220 1222 332 22334688898876
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 133 KDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 133 ~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
-|.+...++.++++++|+++|+++
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEec
Confidence 677777888999999999999885
No 40
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=66.34 E-value=10 Score=33.18 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=43.3
Q ss_pred ccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCC
Q 026729 80 AMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGF 150 (234)
Q Consensus 80 g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~ 150 (234)
+++++.-.+|=..+.+.+.+.|++++..-+...+++-+++.. -|+|+=-.. -.+.++++.+.+.|.
T Consensus 70 sf~G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~v---d~lqIgA~~--~~n~~LLr~va~~gk 135 (285)
T 3sz8_A 70 SYRGVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEIA---DVLQVPAFL--ARQTDLVVAIAKAGK 135 (285)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTTC---SEEEECGGG--TTCHHHHHHHHHTSS
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC---CEEEECccc--cCCHHHHHHHHccCC
Confidence 555653346777899999999999999988888888876542 378872211 122345555544444
No 41
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=65.22 E-value=20 Score=32.01 Aligned_cols=45 Identities=16% Similarity=0.222 Sum_probs=28.7
Q ss_pred eeecCcccCcceEecccccccccCchh---HHHHHHHHHhcCCceEeC
Q 026729 63 TTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLS 107 (234)
Q Consensus 63 ttl~G~~~~~Pi~iaP~g~~~l~~p~g---E~a~AraA~~~gi~~~lS 107 (234)
.+|=|.++.-.|++|||+...-..++| |..+.-=++.++..++++
T Consensus 9 ~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiit 56 (365)
T 2gou_A 9 ITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVS 56 (365)
T ss_dssp EEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEE
T ss_pred eeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 566678889999999998654222343 555555555555555554
No 42
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=64.55 E-value=35 Score=29.72 Aligned_cols=65 Identities=11% Similarity=0.085 Sum_probs=43.5
Q ss_pred HHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 92 ATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 92 a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
..++.|.++|.-++--++...+++++.+..+-|...+==...+.+...+.++.|.++|+..+++.
T Consensus 193 ~aariA~elGAD~VKt~~t~e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vG 257 (295)
T 3glc_A 193 LATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMG 257 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCTTTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHhCCCEEEeCCCHHHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeH
Confidence 37888889998877766654678888876553322221111255566778888888999888764
No 43
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=61.66 E-value=28 Score=30.75 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=26.3
Q ss_pred HHHHhcCCCccEEEEeeeCCH----HHHHHHHHHHHHcCCcEEEEe
Q 026729 115 EEVASTGPGIRFFQLYVYKDR----NVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 115 e~ia~~~~~~~wfQlY~~~d~----~~~~~li~rA~~aG~~AlvvT 156 (234)
+.+.++.+-+....+-+.-+. +.+.+++++++++|+++|.|+
T Consensus 119 ~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 119 KAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEe
Confidence 334443444556655432222 356788899999999999875
No 44
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=61.66 E-value=13 Score=33.46 Aligned_cols=60 Identities=18% Similarity=0.178 Sum_probs=43.4
Q ss_pred chhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHH-HHHHHHHHHcCCcE
Q 026729 87 PEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVV-AQLVRRAERAGFKA 152 (234)
Q Consensus 87 p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~-~~li~rA~~aG~~A 152 (234)
.+|-..+.++|.+.|++++.+-+...+++.+++.. -|+|+ ..+... ..|++.+.+.|...
T Consensus 156 ~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~v---d~lkI---gAr~~~n~~LL~~va~~~kPV 216 (350)
T 1vr6_A 156 EKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYA---DIIQI---GARNAQNFRLLSKAGSYNKPV 216 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHHC---SEEEE---CGGGTTCHHHHHHHHTTCSCE
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhC---CEEEE---CcccccCHHHHHHHHccCCcE
Confidence 35666788999999999999988888888887653 48887 333333 56777776666443
No 45
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=60.64 E-value=16 Score=31.69 Aligned_cols=62 Identities=26% Similarity=0.298 Sum_probs=46.7
Q ss_pred chhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHH-HHHHHHHHHHcCCcEEE
Q 026729 87 PEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNV-VAQLVRRAERAGFKAIA 154 (234)
Q Consensus 87 p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~-~~~li~rA~~aG~~Alv 154 (234)
.+|-..+.+.+.+.|++++.+-+...+++-+++.. -|+|+ ..+.. ...+++.+.+.|...++
T Consensus 88 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~v---d~~kI---gs~~~~n~~ll~~~a~~~kPV~l 150 (276)
T 1vs1_A 88 LEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYA---DMLQI---GARNMQNFPLLREVGRSGKPVLL 150 (276)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHC---SEEEE---CGGGTTCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhC---CeEEE---CcccccCHHHHHHHHccCCeEEE
Confidence 56777899999999999999999999999887663 48998 33333 35677777777754443
No 46
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=60.38 E-value=7.8 Score=34.89 Aligned_cols=123 Identities=15% Similarity=0.053 Sum_probs=66.7
Q ss_pred CchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeC-CC
Q 026729 31 EDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SW 109 (234)
Q Consensus 31 ~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lS-s~ 109 (234)
+-|.+.+--..+++. .+.|+. +....++++++++|.++.-||++|. |. ..+||. .++..+.|..++.- |.
T Consensus 22 ~pe~ah~~~~~~l~~-~~~~~~-~~~~~~~L~~~~~Gl~~~NPvglAa-G~----~~~~~~--~~~~~~~g~G~v~~ktv 92 (367)
T 3zwt_A 22 DPESAHRLAVRFTSL-GLLPRA-RFQDSDMLEVRVLGHKFRNPVGIAA-GF----DKHGEA--VDGLYKMGFGFVEIGSV 92 (367)
T ss_dssp CHHHHHHHHHHHHHT-TCC----CCCCCGGGCEEETTEEESSSEEECT-TS----STTSSS--HHHHHHTTCSEEEEEEE
T ss_pred CHHHHHHHHHHHHHh-cccccc-ccCCCCCCcEEECCEEcCCCCEeCC-Cc----CCCHHH--HHHHHhcCcCeEEeCCc
Confidence 334555555555543 345553 3356789999999999999999983 22 334442 22233345444321 21
Q ss_pred C----------------------------CCCHHH----HHhc---------CCCccEEEEeeeCCH-HHHHHHHHHHHH
Q 026729 110 S----------------------------TSSVEE----VAST---------GPGIRFFQLYVYKDR-NVVAQLVRRAER 147 (234)
Q Consensus 110 s----------------------------s~sle~----ia~~---------~~~~~wfQlY~~~d~-~~~~~li~rA~~ 147 (234)
+ +..++. +... .+.+...||.-.++- +...+.++-++.
T Consensus 93 t~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~ 172 (367)
T 3zwt_A 93 TPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRV 172 (367)
T ss_dssp CSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCeEEEecCccceeeccCCCCccHHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHH
Confidence 1 122333 3321 124678898543211 234555555554
Q ss_pred c--CCcEEEEeeCCCCC
Q 026729 148 A--GFKAIALTVDTPRL 162 (234)
Q Consensus 148 a--G~~AlvvTvD~pv~ 162 (234)
+ ++++|.|.+=+|..
T Consensus 173 ~~~~ad~ielNisCPn~ 189 (367)
T 3zwt_A 173 LGPLADYLVVNVSSPNT 189 (367)
T ss_dssp HGGGCSEEEEECCCTTS
T ss_pred HhhhCCEEEEECCCCCC
Confidence 4 48999999998863
No 47
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=57.96 E-value=34 Score=29.27 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=52.5
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCce--EeCCCC---CCCHHHH-------HhcCCCccEEEEeeeCCHHHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIM--TLSSWS---TSSVEEV-------ASTGPGIRFFQLYVYKDRNVVAQ 140 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~--~lSs~s---s~sle~i-------a~~~~~~~wfQlY~~~d~~~~~~ 140 (234)
|.++.|+. .+-.+.++=..+++-.-+.|+-- +++|.+ +.|.||- .+...+ .+...- ..+-..+.+
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~ 81 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIA 81 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHH
Confidence 55667776 66567676677777777788744 445544 3455543 223334 333331 134567789
Q ss_pred HHHHHHHcCCcEEEEee
Q 026729 141 LVRRAERAGFKAIALTV 157 (234)
Q Consensus 141 li~rA~~aG~~AlvvTv 157 (234)
+.+.|+++|++++++..
T Consensus 82 la~~A~~~Gadavlv~~ 98 (286)
T 2r91_A 82 LAKYAESRGAEAVASLP 98 (286)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 99999999999999984
No 48
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=57.86 E-value=18 Score=39.82 Aligned_cols=105 Identities=16% Similarity=0.187 Sum_probs=66.0
Q ss_pred ccccccCCC-CCCccce---eecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHh----
Q 026729 48 FRPRILIDV-SKIDMNT---TVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS---- 119 (234)
Q Consensus 48 l~prvL~dv-~~~d~st---tl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~---- 119 (234)
|.||..+-- .+++++| .++| ..||+.|||+.. -.+..+|.|++++|-.-+++..+..+.|++.+
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~-----vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~ 629 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPT-----TVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK 629 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTT-----TCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCc-----cccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH
Confidence 578876532 3345554 4577 699999999832 12456899999999999995555666665532
Q ss_pred ---cC--CCccEEEEeee-CCH-HHHHHHHHHHHHcCCcE--EEEeeCCC
Q 026729 120 ---TG--PGIRFFQLYVY-KDR-NVVAQLVRRAERAGFKA--IALTVDTP 160 (234)
Q Consensus 120 ---~~--~~~~wfQlY~~-~d~-~~~~~li~rA~~aG~~A--lvvTvD~p 160 (234)
.. +.+.-+-+... .+. +...++++.+.+.|++. |.++.-.|
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p 679 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVP 679 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCC
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCC
Confidence 22 13333444332 221 12458899999999998 66555444
No 49
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=57.52 E-value=15 Score=33.43 Aligned_cols=57 Identities=16% Similarity=0.155 Sum_probs=30.4
Q ss_pred HHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHH-HHHHHHHHHHHcCCcEEE
Q 026729 92 ATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRN-VVAQLVRRAERAGFKAIA 154 (234)
Q Consensus 92 a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~-~~~~li~rA~~aG~~Alv 154 (234)
.+.+.|.+.|++++.+-+...+++.+++. .-|+|+ ..+. ....+++.+.+.|...++
T Consensus 197 ~L~~~~~~~Gl~~~te~~d~~~~~~l~~~---vd~lkI---gs~~~~n~~LL~~~a~~gkPVil 254 (385)
T 3nvt_A 197 ILKRVSDEYGLGVISEIVTPADIEVALDY---VDVIQI---GARNMQNFELLKAAGRVDKPILL 254 (385)
T ss_dssp HHHHHHHHHTCEEEEECCSGGGHHHHTTT---CSEEEE---CGGGTTCHHHHHHHHTSSSCEEE
T ss_pred HHHHHHHHcCCEEEEecCCHHHHHHHHhh---CCEEEE---CcccccCHHHHHHHHccCCcEEE
Confidence 34444444555555444444444444332 358887 2332 235788887777764443
No 50
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=56.25 E-value=6.2 Score=33.60 Aligned_cols=25 Identities=8% Similarity=0.154 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 133 KDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 133 ~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
.|.+.+.++++...++|+++|.|.+
T Consensus 17 P~~~~t~~~~~~l~~~GaD~ielG~ 41 (240)
T 1viz_A 17 PNKDLPDEQLEILCESGTDAVIIGG 41 (240)
T ss_dssp TTSCCCHHHHHHHHTSCCSEEEECC
T ss_pred CCccccHHHHHHHHHcCCCEEEECC
Confidence 4455678889999999999999988
No 51
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=55.91 E-value=69 Score=28.61 Aligned_cols=44 Identities=11% Similarity=0.215 Sum_probs=27.1
Q ss_pred ceeecCcccCcceEecccccccccCchh---HHHHHHHHHhcCCceEeC
Q 026729 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARAASAAGTIMTLS 107 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~~~l~~p~g---E~a~AraA~~~gi~~~lS 107 (234)
..+|=+.++.-.|++|||+...- ++| |..+.-=++.+|..++++
T Consensus 14 P~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLiit 60 (377)
T 2r14_A 14 PLQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLIIS 60 (377)
T ss_dssp CEEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCEEE
T ss_pred CeeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEEEE
Confidence 46666778899999999986532 332 444444444444444443
No 52
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=54.26 E-value=51 Score=28.25 Aligned_cols=83 Identities=14% Similarity=0.017 Sum_probs=53.3
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCce--EeCCCC---CCCHHHHH-------hcCC--CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIM--TLSSWS---TSSVEEVA-------STGP--GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~--~lSs~s---s~sle~ia-------~~~~--~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+. .+-.+.++=..+++-.-+.|+-- +++|.+ +.|.||-. +... -+.....- ..+-..+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 55667776 66567777777888777788743 455544 34555432 2222 23445542 2345677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8899999999999999984
No 53
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=53.78 E-value=15 Score=32.10 Aligned_cols=47 Identities=19% Similarity=0.190 Sum_probs=32.5
Q ss_pred ccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEE
Q 026729 80 AMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQL 129 (234)
Q Consensus 80 g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQl 129 (234)
+++++.-.+|=..+.+.+.+.|++++.+-+...+++-+++.. -|+|+
T Consensus 67 sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~v---d~lkI 113 (288)
T 3tml_A 67 SFRGLGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASVV---DVLQT 113 (288)
T ss_dssp -----CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHC---SEEEE
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC---CEEEE
Confidence 455553346667799999999999999988888888776543 37776
No 54
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=53.06 E-value=16 Score=30.46 Aligned_cols=73 Identities=16% Similarity=0.094 Sum_probs=43.7
Q ss_pred hhHHHHHHHHHhcCC--ceEeCCCCCCCHHHHHhcCCCccEEEEe------------------------eeCCHHHHHHH
Q 026729 88 EGEYATARAASAAGT--IMTLSSWSTSSVEEVASTGPGIRFFQLY------------------------VYKDRNVVAQL 141 (234)
Q Consensus 88 ~gE~a~AraA~~~gi--~~~lSs~ss~sle~ia~~~~~~~wfQlY------------------------~~~d~~~~~~l 141 (234)
+-+..+++.-.+.|. ..++||+....++.+.+..|...-..++ .......+.++
T Consensus 117 ~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (250)
T 3ks6_A 117 GFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGL 196 (250)
T ss_dssp THHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCCHHH
Confidence 445566666666654 5778888777777777665532221111 11112234567
Q ss_pred HHHHHHcCCcEEEEeeCCC
Q 026729 142 VRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 142 i~rA~~aG~~AlvvTvD~p 160 (234)
+++++++|.+..+.|||.+
T Consensus 197 v~~~~~~G~~V~~WTvn~~ 215 (250)
T 3ks6_A 197 MAQVQAAGLDFGCWAAHTP 215 (250)
T ss_dssp HHHHHHTTCEEEEECCCSH
T ss_pred HHHHHHCCCEEEEEeCCCH
Confidence 7777777777777777754
No 55
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=52.89 E-value=5.9 Score=33.64 Aligned_cols=25 Identities=16% Similarity=0.376 Sum_probs=21.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 133 KDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 133 ~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
.|.+.+.++++.+.++|+++|.|.+
T Consensus 17 P~~~~t~~~~~~l~~~GaD~IelG~ 41 (234)
T 2f6u_A 17 PDRTNTDEIIKAVADSGTDAVMISG 41 (234)
T ss_dssp TTSCCCHHHHHHHHTTTCSEEEECC
T ss_pred CCccccHHHHHHHHHcCCCEEEECC
Confidence 4455678889999999999999988
No 56
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=52.80 E-value=51 Score=28.19 Aligned_cols=83 Identities=18% Similarity=0.068 Sum_probs=52.6
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcCC--CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTGP--GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~~--~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+. .+-.+.++=..+++---+.|+- ++++|.+ +.|.||- .+... -+.....- ..+-..+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 45567776 6656767767777777778874 3455544 3455443 22222 23444442 2344667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 85 i~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8899999999999999884
No 57
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=52.78 E-value=30 Score=29.67 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=47.2
Q ss_pred cEEEEeee-CCH--HHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCCCcCccccccccccCCCcccCcccHH
Q 026729 125 RFFQLYVY-KDR--NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLA 201 (234)
Q Consensus 125 ~wfQlY~~-~d~--~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (234)
..|=.|+. +|+ +.+.++++..+++|++.|=+. .| |+.|.- .+..+.
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElg--iP------------fSDP~a-----------------DGp~Iq 66 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELG--FP------------FSDPLA-----------------DGPVIQ 66 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE--CC------------CSCCTT-----------------CCHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC--CC------------CCCCCC-----------------CCHHHH
Confidence 45556664 444 889999999999999886543 33 433310 011111
Q ss_pred HHhhhcCCCCCCh----HHHHHHHHh-CCCccccccc
Q 026729 202 AYVAGQIDRSLSW----KNILCLYQD-FSFECDVMLY 233 (234)
Q Consensus 202 ~~~~~~~~~~~tW----~di~wlr~~-w~l~~~~~~~ 233 (234)
......+...++. +.++.+|+. .+.|+++|.|
T Consensus 67 ~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y 103 (267)
T 3vnd_A 67 GANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLY 103 (267)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 1111122223343 568888988 8999999987
No 58
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=52.68 E-value=32 Score=39.38 Aligned_cols=104 Identities=20% Similarity=0.323 Sum_probs=66.2
Q ss_pred cccccccCCC-CC--Cccc-eeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH----
Q 026729 47 LFRPRILIDV-SK--IDMN-TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA---- 118 (234)
Q Consensus 47 ~l~prvL~dv-~~--~d~s-ttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia---- 118 (234)
.|.||+.+.- .. .++. +.+|| ..||+.+||+... ..-.+|.|..++|-.-.++..+-.+.|++.
T Consensus 402 ~f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-----s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~ 473 (3089)
T 3zen_D 402 SYAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-----VDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIA 473 (3089)
T ss_dssp GGCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-----TSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHH
T ss_pred ccCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-----CCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHH
Confidence 4788876532 22 2333 56788 7899999998531 123588888999988888766655655443
Q ss_pred ---hcCC-C-ccEE-EEeeeCCHHH------HHHHHHHHHHcC--CcEEEEeeCCC
Q 026729 119 ---STGP-G-IRFF-QLYVYKDRNV------VAQLVRRAERAG--FKAIALTVDTP 160 (234)
Q Consensus 119 ---~~~~-~-~~wf-QlY~~~d~~~------~~~li~rA~~aG--~~AlvvTvD~p 160 (234)
+..+ + +.=+ -+|+ +... ..++++.+.++| +++|+++.|.|
T Consensus 474 ~~r~~~~~~~p~~vNl~~~--~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P 527 (3089)
T 3zen_D 474 ELETLLEPGRAIQFNTLFL--DPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIP 527 (3089)
T ss_dssp HHHHHSCTTCCCEEEEECS--CHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCC
T ss_pred HHHHhcCCCCceeechhhc--ChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCC
Confidence 2222 2 2111 2333 3322 147899999999 66799998888
No 59
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=52.62 E-value=12 Score=33.09 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=40.4
Q ss_pred ccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCc
Q 026729 80 AMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFK 151 (234)
Q Consensus 80 g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~ 151 (234)
+++++.-.+|=..+.+.+.+.|++++.+-+...+++.+++. .-|+|+=-.. -.+.++++.+.+.|..
T Consensus 91 sf~Glg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~---vd~lkIgA~~--~~n~~LLr~va~~gkP 157 (298)
T 3fs2_A 91 AARGIGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV---VDVLQIPAFL--CRQTDLLIAAARTGRV 157 (298)
T ss_dssp ----CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT---CSEEEECGGG--TTCHHHHHHHHHTTSE
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh---CCEEEECccc--cCCHHHHHHHHccCCc
Confidence 55565334676779999999999999887777777766543 3488872211 1223466655555543
No 60
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=52.45 E-value=21 Score=30.75 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=43.3
Q ss_pred cccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCC
Q 026729 81 MQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGF 150 (234)
Q Consensus 81 ~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~ 150 (234)
..++.-.+|=..+.+.+.+.|+|++..-+...+++.+++. .-|+|+=-.. -.+.++++.+...|.
T Consensus 55 f~G~g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~---vd~~~IgA~~--~rn~~ll~~~a~~~~ 119 (267)
T 2nwr_A 55 FRGHGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEV---ADIIQIPAFL--CRQTDLLLAAAKTGR 119 (267)
T ss_dssp CCCSCHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTT---CSEEEECGGG--TTCHHHHHHHHTTTS
T ss_pred CcCccHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhc---CCEEEECccc--ccCHHHHHHHHcCCC
Confidence 4444335676778999999999999999888888888763 3488872211 122346666644444
No 61
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=52.07 E-value=17 Score=33.42 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=43.7
Q ss_pred cccccccccCCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceE-eCCCCCCCHHHHHhcCCC
Q 026729 45 RILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSWSTSSVEEVASTGPG 123 (234)
Q Consensus 45 r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~-lSs~ss~sle~ia~~~~~ 123 (234)
++.+.|+. +....+.++|+++|.++.-||++|. +. ..+||. .++..++|..++ +.|.+..+ ....|.
T Consensus 69 ~~~~~~~~-~~~~~~~l~v~~~Gl~f~NPvglAA----G~-dk~~~~--~~~l~~lGfG~vevgtvT~~p----q~GNp~ 136 (415)
T 3i65_A 69 KYNILPYD-TSNDSIYACTNIKHLDFINPFGVAA----GF-DKNGVC--IDSILKLGFSFIEIGTITPRG----QTGNAK 136 (415)
T ss_dssp HTTCSCCC-CSCCCGGGCEEETTEEESSSEEECT----TS-STTCSS--HHHHHTTTCSEEEEEEECSSC----BCCSCS
T ss_pred HhcCCCcc-cccccccccEEECCEECCCCCEECC----CC-CCCHHH--HHHHHHcCCCeEEeCcccCCc----CCCCCC
Confidence 44455653 2345567899999999999999976 22 224433 256667886544 44443222 122346
Q ss_pred ccEEEE
Q 026729 124 IRFFQL 129 (234)
Q Consensus 124 ~~wfQl 129 (234)
|+.|.|
T Consensus 137 PRlfrl 142 (415)
T 3i65_A 137 PRIFRD 142 (415)
T ss_dssp CCEEEE
T ss_pred CeEEec
Confidence 677765
No 62
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=52.06 E-value=25 Score=33.63 Aligned_cols=108 Identities=19% Similarity=0.286 Sum_probs=51.5
Q ss_pred hhccccccccccCCC--CCCccceee-cCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH
Q 026729 42 AFSRILFRPRILIDV--SKIDMNTTV-LGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (234)
Q Consensus 42 af~r~~l~prvL~dv--~~~d~sttl-~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia 118 (234)
-|+++.|+|.. .++ +++|++|.| =+.++..||+-|||--- -|..+|-+-++.|=.-++- -+.|+|+-+
T Consensus 61 TfDDVlLvP~~-s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTV------Te~~MAIamAr~GGiGvIH--~n~sie~Qa 131 (556)
T 4af0_A 61 TYNDFLVLPGH-INFPASDVSLQSKATKNIVLNTPFLSSPMDTV------TEDRMAIALALHGGLGIIH--HNCSAEEQA 131 (556)
T ss_dssp CGGGEEECCCC-CCSCGGGCCCCEEEETTEEESSCEEECCCTTT------CSHHHHHHHHHTTCEEEEC--CSSCHHHHH
T ss_pred ChhhEEEccCC-CCCCcccceeeeeccCCcEeCCCEEecCcccc------cCHHHHHHHHHCCCeEEEc--CCCCHHHHH
Confidence 69999999986 455 578999988 47889999999997522 3666777777776666663 457787755
Q ss_pred hcCC-----CccEEE--EeeeCCHHHHHHHHHHHHHcCCcEEEEeeCC
Q 026729 119 STGP-----GIRFFQ--LYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 119 ~~~~-----~~~wfQ--lY~~~d~~~~~~li~rA~~aG~~AlvvTvD~ 159 (234)
+... ...|.. +.+..| ....+.++-.++-|+..+.|+-|.
T Consensus 132 ~~V~~VKr~e~g~i~dPvtl~P~-~Tv~da~~l~~~~~isgvpVvd~g 178 (556)
T 4af0_A 132 AMVRRVKKYENGFITDPLCLGPD-ATVGDVLEIKAKFGFCGVPITETG 178 (556)
T ss_dssp HHHHHHHHCCC-------------------------------------
T ss_pred HHHHHHHhcccCccCCCeEcCCC-CCHHHHHHHHHHhCCCcccccccc
Confidence 3210 112322 122222 234556666667788888887763
No 63
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=51.90 E-value=29 Score=29.81 Aligned_cols=80 Identities=14% Similarity=0.200 Sum_probs=49.6
Q ss_pred CccEEEEeee---CCHHHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCCCcCccccccccccCCCcccCccc
Q 026729 123 GIRFFQLYVY---KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSG 199 (234)
Q Consensus 123 ~~~wfQlY~~---~d~~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~ 199 (234)
+...|=.|+. .|.+.+.++++..+++|++.|=+.+ | |+.|. . .+..
T Consensus 18 ~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGi--P------------fSDP~---------------a--DGpv 66 (271)
T 3nav_A 18 QQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGM--P------------FSDPL---------------A--DGPT 66 (271)
T ss_dssp TBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--C------------CCCGG---------------G--CCSH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--C------------CCCCC---------------C--CCHH
Confidence 3456667774 4568889999999999998876553 2 33331 0 1112
Q ss_pred HHHHhhhcCCCCCC----hHHHHHHHHh-CCCccccccc
Q 026729 200 LAAYVAGQIDRSLS----WKNILCLYQD-FSFECDVMLY 233 (234)
Q Consensus 200 ~~~~~~~~~~~~~t----W~di~wlr~~-w~l~~~~~~~ 233 (234)
+.......+...++ ++.++.+|+. .+.|+++|.|
T Consensus 67 Iq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y 105 (271)
T 3nav_A 67 IQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMY 105 (271)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 22222222233344 4668888887 8999999987
No 64
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=51.77 E-value=58 Score=27.83 Aligned_cols=83 Identities=16% Similarity=0.091 Sum_probs=51.8
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCce--EeCCCC---CCCHHHHH-------hcCCCccEEEEeeeCCHHHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIM--TLSSWS---TSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQ 140 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~--~lSs~s---s~sle~ia-------~~~~~~~wfQlY~~~d~~~~~~ 140 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+-- +.+|.+ +.|.||-. +...+ .+...- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~ 82 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVME 82 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHH
Confidence 45566765444456666667777777788744 455544 34555532 22234 333331 134567789
Q ss_pred HHHHHHHcCCcEEEEee
Q 026729 141 LVRRAERAGFKAIALTV 157 (234)
Q Consensus 141 li~rA~~aG~~AlvvTv 157 (234)
+.+.|+++|++++++..
T Consensus 83 la~~A~~~Gadavlv~~ 99 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSHS 99 (288)
T ss_dssp HHHHHHTSCCSEEEECC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 99999999999999984
No 65
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=51.47 E-value=86 Score=26.97 Aligned_cols=85 Identities=12% Similarity=0.026 Sum_probs=52.7
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcCC--CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTGP--GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~~--~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+-.+.++=..+++-.-+.|+- ++.+|.+ +.|.||- .+... -+.+.+.- ..+-..
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ 99 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRT 99 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHH
Confidence 35556676544445666666777777777874 4455543 4555543 22222 24455542 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 100 ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 88999999999999999884
No 66
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=50.85 E-value=92 Score=26.60 Aligned_cols=84 Identities=15% Similarity=0.102 Sum_probs=53.0
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcCC--CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTGP--GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~~--~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||- .+... -+.+.+.- ..+-..+
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHH
Confidence 4556676544445666666777777778874 3455544 3455543 22333 24556652 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 88 i~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8999999999999999984
No 67
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=49.97 E-value=14 Score=26.33 Aligned_cols=25 Identities=12% Similarity=0.292 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHcCCcEEE-EeeCCC
Q 026729 136 NVVAQLVRRAERAGFKAIA-LTVDTP 160 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~Alv-vTvD~p 160 (234)
...++|+++|++.|+.||| +-+|+.
T Consensus 35 ~A~~rm~e~A~~lGAnAVVgvr~d~~ 60 (81)
T 2jz7_A 35 EIVENLRKQVKAKGGMGLIAFRITCA 60 (81)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEEcc
Confidence 4568999999999999975 344444
No 68
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=49.83 E-value=80 Score=27.24 Aligned_cols=85 Identities=11% Similarity=0.024 Sum_probs=54.2
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHHH-------hcCC--CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEVA-------STGP--GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~ia-------~~~~--~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+-.+.++=..+++-..+.|+- ++.+|.+ +.|.||-. +... -+.+...- ..+-..
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 98 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAH 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 34556676545545666666777777788874 4455554 34555532 2222 24455542 245577
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 99 ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 88999999999999999974
No 69
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=49.79 E-value=91 Score=27.45 Aligned_cols=85 Identities=16% Similarity=0.097 Sum_probs=53.6
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCC--ceEeCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGT--IMTLSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi--~~~lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+-.+.++=..+++-.-+.|+ .++++|.+ +.|.||- .+. .+ -+....+- ..+-..
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 4566677754444566666677777777777 44556544 3455543 222 22 34555542 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 115 ai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78999999999999999984
No 70
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=49.63 E-value=11 Score=31.87 Aligned_cols=85 Identities=18% Similarity=0.160 Sum_probs=48.9
Q ss_pred cccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCC-CC----CCHHHHHhcCC----CccEEEEeeeCCHHHH
Q 026729 68 FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW-ST----SSVEEVASTGP----GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 68 ~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~-ss----~sle~ia~~~~----~~~wfQlY~~~d~~~~ 138 (234)
..+..|+.+-.+.+.. .+-...+.++.++.|+-.+++-. -+ .-+|.+++..+ .|.|-+ | .
T Consensus 60 ~~LGIpl~~v~~~g~~---~~e~e~l~~~l~~~~i~~vv~Gdi~s~yqr~r~e~vc~~~gl~~~~PLW~~-----d---~ 128 (237)
T 3rjz_A 60 RALGIPLVKGFTQGEK---EKEVEDLKRVLSGLKIQGIVAGALASKYQRKRIEKVAKELGLEVYTPAWGR-----D---A 128 (237)
T ss_dssp HHHTCCEEEEEC---------CHHHHHHHHTTSCCSEEECC---CCSHHHHHHHHHHHTTCEEECSSSSC-----C---H
T ss_pred HHcCCCEEEEECCCCc---hHHHHHHHHHHHhcCCcEEEECCcchHHHHHHHHHHHHHcCCEEEccccCC-----C---H
Confidence 4445577666554321 11123566666666776555421 11 12566665443 345543 4 4
Q ss_pred HHHHHHHHHcCCcEEEEeeCCCCCC
Q 026729 139 AQLVRRAERAGFKAIALTVDTPRLG 163 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTvD~pv~G 163 (234)
.+++++..++|++|+++.||+..++
T Consensus 129 ~~Ll~e~i~~G~~aiiv~v~~~gL~ 153 (237)
T 3rjz_A 129 KEYMRELLNLGFKIMVVGVSAYGLD 153 (237)
T ss_dssp HHHHHHHHHTTCEEEEEEEESTTCC
T ss_pred HHHHHHHHHCCCEEEEEEEecCCCC
Confidence 5788888999999999999987543
No 71
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=49.20 E-value=87 Score=26.91 Aligned_cols=85 Identities=15% Similarity=0.096 Sum_probs=52.3
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~~ 138 (234)
|-++.|+.-.+-.+.++=..+++-..+.|+- ++++|.+ +.|.||- .+. .+ -+.....- ..+-..+
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 4455666544445666666777777777874 3455544 3455543 222 22 34555542 2345677
Q ss_pred HHHHHHHHHcCCcEEEEeeC
Q 026729 139 AQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTvD 158 (234)
.++.+.|+++|++++++..=
T Consensus 97 i~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcCC
Confidence 89999999999999998853
No 72
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=49.13 E-value=66 Score=27.53 Aligned_cols=83 Identities=16% Similarity=0.047 Sum_probs=50.7
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHHH-------hcCCCccEEEEeeeCCHHHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQ 140 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~ia-------~~~~~~~wfQlY~~~d~~~~~~ 140 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||-. +...+ .+.+.- ..+-..+.+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~ 82 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIR 82 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHH
Confidence 4456676544445666666777777777874 4455544 34555532 22334 333331 134466788
Q ss_pred HHHHHHHcCCcEEEEee
Q 026729 141 LVRRAERAGFKAIALTV 157 (234)
Q Consensus 141 li~rA~~aG~~AlvvTv 157 (234)
+.+.|+++|++++++..
T Consensus 83 la~~A~~~Gadavlv~~ 99 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASYA 99 (293)
T ss_dssp HHHHGGGSCCSEEEEEC
T ss_pred HHHHHHhcCCCEEEEcC
Confidence 89999999999999884
No 73
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=49.06 E-value=29 Score=30.19 Aligned_cols=63 Identities=16% Similarity=0.142 Sum_probs=45.0
Q ss_pred chhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEE
Q 026729 87 PEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIA 154 (234)
Q Consensus 87 p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alv 154 (234)
.+|-..+.+.+.+.|++++.+-+...+++-+++. .-|+|+=-.. -.+.++++.+.+.|...++
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~---vd~~kIgA~~--~~n~~Ll~~~a~~~kPV~l 137 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVADV---VDIIQLPAFL--ARQTDLVEAMAKTGAVINV 137 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTT---CSEEEECGGG--TTCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhc---CCEEEECccc--ccCHHHHHHHHcCCCcEEE
Confidence 5677778999999999999999998899888763 4599982211 1224577777666654443
No 74
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=48.66 E-value=50 Score=22.12 Aligned_cols=34 Identities=29% Similarity=0.437 Sum_probs=29.8
Q ss_pred CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEE
Q 026729 122 PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (234)
Q Consensus 122 ~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alvv 155 (234)
++..+.|+--.++++..+.+.++.+..|+.+.++
T Consensus 7 ~~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~ 40 (79)
T 1x60_A 7 SGLYKVQIGAFKVKANADSLASNAEAKGFDSIVL 40 (79)
T ss_dssp CCEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEe
Confidence 3567899999999999999999999999998875
No 75
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=48.62 E-value=25 Score=30.03 Aligned_cols=62 Identities=19% Similarity=0.172 Sum_probs=45.2
Q ss_pred chhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHH-HHHHHHHHHcCCcEEE
Q 026729 87 PEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVV-AQLVRRAERAGFKAIA 154 (234)
Q Consensus 87 p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~-~~li~rA~~aG~~Alv 154 (234)
.+|-..+.+.+.+.|++++.+-+...+++.+++.. -|+|+ ..+... ..+++.+.+.|...++
T Consensus 73 ~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~v---d~~kI---ga~~~~n~~ll~~~a~~~kPV~l 135 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAKYS---DILQI---GARNSQNFELLKEVGKVENPVLL 135 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHHC---SEEEE---CGGGTTCHHHHHHHTTSSSCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhhC---CEEEE---CcccccCHHHHHHHHhcCCcEEE
Confidence 67778899999999999999999988888887653 48887 333322 4567666666655444
No 76
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=48.43 E-value=84 Score=27.03 Aligned_cols=84 Identities=17% Similarity=0.091 Sum_probs=51.8
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcC-C-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTG-P-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~-~-~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||- .+.. + -+.+...- ..+-..+
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 95 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAES 95 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 4455676544445666666777777777874 4455544 3455543 2222 2 24455542 2244667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 96 i~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhCCCCEEEecC
Confidence 8999999999999999984
No 77
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=48.21 E-value=91 Score=23.90 Aligned_cols=82 Identities=13% Similarity=0.114 Sum_probs=51.0
Q ss_pred cccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeC-CH-----------HHHHHHHHHHH
Q 026729 79 TAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYK-DR-----------NVVAQLVRRAE 146 (234)
Q Consensus 79 ~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~-d~-----------~~~~~li~rA~ 146 (234)
+|+--+.||+--..+.+.|++.|+...+.|.++.+-+.+..-.+..-++++-+.. |. +.+.+-++++.
T Consensus 10 tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~ 89 (182)
T 3can_A 10 CGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVA 89 (182)
T ss_dssp CSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHH
T ss_pred EcccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4555577886545788888889999999999886533332211113356665543 22 33455677777
Q ss_pred HcCCcEEEEeeCCC
Q 026729 147 RAGFKAIALTVDTP 160 (234)
Q Consensus 147 ~aG~~AlvvTvD~p 160 (234)
+.|.+..+-++=.|
T Consensus 90 ~~g~~v~i~~~v~~ 103 (182)
T 3can_A 90 EADFPYYIRIPLIE 103 (182)
T ss_dssp HTTCCEEEEEEECB
T ss_pred hCCCeEEEEEEEEC
Confidence 78887666555444
No 78
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=48.08 E-value=84 Score=27.10 Aligned_cols=85 Identities=8% Similarity=-0.011 Sum_probs=51.3
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcCCC--ccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTGPG--IRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~~~--~~wfQlY~~~d~~~ 137 (234)
.|-++.|+.-.+-.+.++=..+++--.+.|+- ++.+|.+ +.|.||- .+..++ +.+...- ..+-..
T Consensus 19 ~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ 97 (307)
T 3s5o_A 19 YPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQA 97 (307)
T ss_dssp ECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHH
T ss_pred EEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHH
Confidence 34455666544445555656677777788884 3444433 3455542 223332 3344431 235566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 98 ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 78999999999999999873
No 79
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=47.88 E-value=45 Score=28.84 Aligned_cols=84 Identities=14% Similarity=0.077 Sum_probs=53.6
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCce--EeCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIM--TLSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~--~lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+. .+-.+.++=..+++-.-+.|+-- +++|.+ +.|.||- .+. .+ -+.....- ..+-..
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ 95 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEK 95 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHH
Confidence 355567776 66567677677888777778743 445433 4455543 222 22 34455542 234567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 96 ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78999999999999999984
No 80
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=47.31 E-value=72 Score=30.45 Aligned_cols=45 Identities=9% Similarity=0.059 Sum_probs=26.5
Q ss_pred ceeecCcccCcceEecccccccccCchhHH--HHHHHHHhcCCceEeC
Q 026729 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEY--ATARAASAAGTIMTLS 107 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~--a~AraA~~~gi~~~lS 107 (234)
..+|=+.++.-+|++|||+.. +..+..+. ..-+..++.|+.++++
T Consensus 17 p~~ig~~~l~NRiv~apm~~~-~~~~~~~~~~~~~~~~a~gG~gliit 63 (690)
T 3k30_A 17 PVQIGPFTTKNRFYQVPHCNG-MGYRDPSAQASMRKIKAEGGWSAVCT 63 (690)
T ss_dssp CCEETTEECSSSEEECCCCCS-CSSSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CeeECCEEECCCeEeCCCcCC-CCCCChHHHHHHHHHHhccCCEEEEe
Confidence 366767899999999998743 23333222 1222344556655553
No 81
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=47.20 E-value=15 Score=32.17 Aligned_cols=65 Identities=20% Similarity=0.176 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHhcCCceEeCCCCCC----CHHHHH-------hcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 88 EGEYATARAASAAGTIMTLSSWSTS----SVEEVA-------STGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 88 ~gE~a~AraA~~~gi~~~lSs~ss~----sle~ia-------~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
+-=.++.+||++.+.|.|+...... .++.++ +..+-|..++| |.....+.+++|-++||+-+++.
T Consensus 29 e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMiD 104 (286)
T 1gvf_A 29 ETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHL----DHHESLDDIRRKVHAGVRSAMID 104 (286)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEE----EEECCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEc----CCCCCHHHHHHHHHcCCCeEEEC
Confidence 4445788889998988888644321 233332 22344566776 55555678888888898887654
No 82
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=47.18 E-value=87 Score=25.91 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=24.0
Q ss_pred cEEEEeee---CCHHHHHHHHHHHHHcCCcEEEE
Q 026729 125 RFFQLYVY---KDRNVVAQLVRRAERAGFKAIAL 155 (234)
Q Consensus 125 ~wfQlY~~---~d~~~~~~li~rA~~aG~~Alvv 155 (234)
.-+-+|+. .+.+...+.++.++++|++.|-+
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~iel 51 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIEL 51 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEE
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 46778883 34467788999999999998866
No 83
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=47.09 E-value=41 Score=30.94 Aligned_cols=40 Identities=23% Similarity=0.471 Sum_probs=32.0
Q ss_pred hhccccccccccC-CCCCCccceeecC-cccCcceEeccccc
Q 026729 42 AFSRILFRPRILI-DVSKIDMNTTVLG-FKISMPIMIAPTAM 81 (234)
Q Consensus 42 af~r~~l~prvL~-dv~~~d~sttl~G-~~~~~Pi~iaP~g~ 81 (234)
.|+++.|.|..-. ..+.+|++|++-+ ..+..||+.|||..
T Consensus 16 ~~dd~~~~p~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~m~~ 57 (486)
T 2cu0_A 16 TFDDVLLIPQATEVEPKDVDVSTRITPNVKLNIPILSAAMDT 57 (486)
T ss_dssp CGGGEEECCCCCSSCSTTCBCCEEEETTEEESSSEEECCCTT
T ss_pred CccCEEEcCCcCCCCcceEEEEeeecCCcccccceEEcccee
Confidence 4899999998643 3367899998865 68999999999873
No 84
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=47.02 E-value=70 Score=27.68 Aligned_cols=88 Identities=15% Similarity=0.059 Sum_probs=54.8
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||- .+. .+ -+.+...- ..+-..
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 35556676555545666666777777777874 4444443 3455542 222 22 34556652 235567
Q ss_pred HHHHHHHHHHcCCcEEEEeeCCCCC
Q 026729 138 VAQLVRRAERAGFKAIALTVDTPRL 162 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD~pv~ 162 (234)
+.++.+.|+++|++++++.. |..
T Consensus 92 ai~la~~A~~~Gadavlv~~--Pyy 114 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMP--PYH 114 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECC--SCB
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCC
Confidence 78999999999999999874 544
No 85
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=46.35 E-value=90 Score=26.73 Aligned_cols=84 Identities=20% Similarity=0.053 Sum_probs=52.6
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHHH-------hcC-C-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEVA-------STG-P-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~ia-------~~~-~-~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+.-.+-.+.++=..+++---+.|+- ++.+|.+ +.|.||-. +.. + -+.+...- ..+-..+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 4455666544445666666777777778875 4445544 34555432 222 2 34555542 2356678
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 92 i~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8999999999999999874
No 86
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=45.19 E-value=41 Score=31.29 Aligned_cols=103 Identities=18% Similarity=0.283 Sum_probs=62.9
Q ss_pred hhccccccccccCCC--CCCccceeec-CcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH
Q 026729 42 AFSRILFRPRILIDV--SKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (234)
Q Consensus 42 af~r~~l~prvL~dv--~~~d~sttl~-G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia 118 (234)
.|+++.|.|..- ++ +++|++|.+- +..+..||+.|||... -+.|++.+- |..-|+.++-. +.+.|+.+
T Consensus 12 t~~d~~~~p~~~-~~~~~~~~~~t~lt~~i~l~iPivsa~MdtV----Te~~ma~a~-a~~GGiGvI~~---n~s~e~qa 82 (496)
T 4fxs_A 12 TFDDVLLVPAHS-TVLPNTADLRTRLTKNIALNIPMVSASMDTV----TEARLAIAL-AQEGGIGFIHK---NMSIEQQA 82 (496)
T ss_dssp CGGGEEECCCCC-CCCGGGCBCCEEEETTEEESSSEEECCCTTT----CSHHHHHHH-HHHTCEEEECS---SSCHHHHH
T ss_pred CcccEEEecCcc-ccccccccccceeccccccCCCceecCcchh----hHHHHHHHH-HHcCCcceecC---CCCHHHHH
Confidence 489999999753 33 4688888876 5689999999998632 234444332 33445555532 45565533
Q ss_pred h-------cCC----CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeC
Q 026729 119 S-------TGP----GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 119 ~-------~~~----~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD 158 (234)
+ ... .+.++ ..| .-..+.++...+.++..+.|+=+
T Consensus 83 ~~V~~Vk~~~~~m~~d~v~v----~~~-~tv~ea~~~m~~~~~s~~PVvd~ 128 (496)
T 4fxs_A 83 AQVHQVKIFEAGVVTHPVTV----RPE-QTIADVMELTHYHGFAGFPVVTE 128 (496)
T ss_dssp HHHHHHHHCCC--CBCCCCB----CSS-SBHHHHHHHHTSSCCCEEEEECS
T ss_pred HHHHhccccccccccCceEE----CCC-CCHHHHHHHHHHcCCcEEEEEcc
Confidence 2 111 22222 222 33567777777889999888753
No 87
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=45.04 E-value=50 Score=30.80 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=62.7
Q ss_pred hhccccccccccCCC--CCCccceeec-CcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH
Q 026729 42 AFSRILFRPRILIDV--SKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (234)
Q Consensus 42 af~r~~l~prvL~dv--~~~d~sttl~-G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia 118 (234)
-|+++.|.|.. .++ +++|++|.+- +..+..|++-|||... -|..+|-+-++.|-.-++.. +.++++.+
T Consensus 36 t~~d~~~~p~~-~~~~~~~~~~~t~lt~~i~l~iPivsa~Mdtv------Te~~lAia~a~~GgiGvIh~--~~~~~~q~ 106 (511)
T 3usb_A 36 TFDDVLLVPAK-SDVLPREVSVKTVLSESLQLNIPLISAGMDTV------TEADMAIAMARQGGLGIIHK--NMSIEQQA 106 (511)
T ss_dssp CGGGEEECCCC-CCCCTTTSBCCEEEETTEEESSSEEECSCTTT------CSHHHHHHHHHHTCEEEECS--SSCHHHHH
T ss_pred ceEEEEEECCc-ccccccceEeeeEeecccccCCCccccCchhh------cHHHHHHHHHhcCCceeecc--cCCHHHHH
Confidence 48999999975 233 4688888876 4588999999998632 23344444444444444432 45655433
Q ss_pred -------hcCC----CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeC
Q 026729 119 -------STGP----GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 119 -------~~~~----~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD 158 (234)
.... .+.+ +..| .-..+.++...+.|+..+.|+=+
T Consensus 107 ~~V~~V~~~~~~m~~d~v~----l~~~-~tv~ea~~~m~~~~~s~~pVvd~ 152 (511)
T 3usb_A 107 EQVDKVKRSESGVISDPFF----LTPE-HQVYDAEHLMGKYRISGVPVVNN 152 (511)
T ss_dssp HHHHHHHTSSSCSSSSCCC----BCTT-SBHHHHHHHHHHHCCSEEEEESC
T ss_pred HHHHHhhccccccccCCEE----ECCC-CCHHHHHHHHHHcCCcEEEEEec
Confidence 1111 1212 2223 34567777888889999998754
No 88
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=45.00 E-value=82 Score=26.87 Aligned_cols=84 Identities=14% Similarity=0.025 Sum_probs=52.3
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHHH-------hcC-C-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEVA-------STG-P-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~ia-------~~~-~-~~~wfQlY~~~d~~~~ 138 (234)
|-++.|+.-.+-.+.++=..+++-.-+.|+- ++.+|.+ +.|.||-. +.. + -+.+...- ..+-..+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4556676554545666666777777777774 4445554 34555532 222 2 34455542 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8999999999999999874
No 89
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=44.54 E-value=21 Score=30.82 Aligned_cols=70 Identities=19% Similarity=0.176 Sum_probs=46.4
Q ss_pred HHHHHHHHhcCC--ceEeCCCCCCCHHHHHhcCCCccEEEEeeeC-----------------------------------
Q 026729 91 YATARAASAAGT--IMTLSSWSTSSVEEVASTGPGIRFFQLYVYK----------------------------------- 133 (234)
Q Consensus 91 ~a~AraA~~~gi--~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~----------------------------------- 133 (234)
..+++.-.+.|. ..+++|+....++.+.+..|...-.+|+...
T Consensus 168 ~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 247 (313)
T 3l12_A 168 AAVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQ 247 (313)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhccccHHHHHHHhCCc
Confidence 346666666654 4788888877888887665543333333211
Q ss_pred -----CHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 134 -----DRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 134 -----d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
-...+.+++++|+++|.+..+.|||.+
T Consensus 248 ~~~~~~~~~~~~~v~~~~~~Gl~V~~WTVn~~ 279 (313)
T 3l12_A 248 LWCPYFLDVTPELVAEAHDLGLIVLTWTVNEP 279 (313)
T ss_dssp EEEEBGGGCCHHHHHHHHHTTCEEEEBCCCSH
T ss_pred EEecchhcCCHHHHHHHHHCCCEEEEEcCCCH
Confidence 112346889999999999999999865
No 90
>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A
Probab=44.50 E-value=18 Score=26.69 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHcCCcEEE-EeeCCCCC
Q 026729 136 NVVAQLVRRAERAGFKAIA-LTVDTPRL 162 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~Alv-vTvD~pv~ 162 (234)
+...+|.++|++.|+.||| +.+|....
T Consensus 60 ~A~~rm~~~A~~lGAnAVVgvr~d~~~i 87 (103)
T 1vr4_A 60 IAMDEMKELAKQKGANAIVGVDVDYEVV 87 (103)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEEeeee
Confidence 4567899999999999975 56665443
No 91
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=43.86 E-value=69 Score=27.81 Aligned_cols=100 Identities=20% Similarity=0.103 Sum_probs=53.8
Q ss_pred CCCccceeecCccc----CcceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------Hhc
Q 026729 57 SKIDMNTTVLGFKI----SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------AST 120 (234)
Q Consensus 57 ~~~d~sttl~G~~~----~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~ 120 (234)
+.+|+.+.=+..+. -.|.++.|+.-.+-.+.++=..+++-.-+.|+- ++.+|.+ +.|.||- .+.
T Consensus 9 ~~~~~~~~~~~~~~~~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~ 88 (314)
T 3qze_A 9 SGVDLGTENLYFQSMIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQ 88 (314)
T ss_dssp --------------CCCEEEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHH
T ss_pred cccccccccccccccCCeeEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 44555544443332 235566777655545666666777777777874 4444443 3455543 222
Q ss_pred C-C-CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 121 G-P-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 121 ~-~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
. + -+.+...- ..+-..+.++.+.|+++|++++++..
T Consensus 89 ~~grvpViaGvg-~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 89 VKGRIPVIAGTG-ANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HTTSSCEEEECC-CSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred hCCCCcEEEeCC-CcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2 2 34555542 23556788999999999999999984
No 92
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=43.55 E-value=20 Score=29.88 Aligned_cols=68 Identities=16% Similarity=0.117 Sum_probs=42.1
Q ss_pred HHHHHHhcCC---ceEeCCCCCCCHHHHHhcCCCccEEEEee-------------------eCCHHHHHHHHHHHHHcCC
Q 026729 93 TARAASAAGT---IMTLSSWSTSSVEEVASTGPGIRFFQLYV-------------------YKDRNVVAQLVRRAERAGF 150 (234)
Q Consensus 93 ~AraA~~~gi---~~~lSs~ss~sle~ia~~~~~~~wfQlY~-------------------~~d~~~~~~li~rA~~aG~ 150 (234)
+++..++.+. ..++||+....++.+.+..|...-..|+. ......+.+++++++++|.
T Consensus 132 v~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~ 211 (252)
T 3qvq_A 132 SVEVLKQHWPQDLPLLFSSFNYFALVSAKALWPEIARGYNVSAIPSAWQERLEHLDCAGLHIHQSFFDVQQVSDIKAAGY 211 (252)
T ss_dssp HHHHHHHHSCTTSCEEEEESCHHHHHHHHHHCTTSCEEEECSSCCTTHHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTC
T ss_pred HHHHHHHhCcccCCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCchhHHHHHHHcCCeEEecchhhCCHHHHHHHHHCCC
Confidence 4444455443 46788888777777776555332223321 1112244678888899999
Q ss_pred cEEEEeeCCC
Q 026729 151 KAIALTVDTP 160 (234)
Q Consensus 151 ~AlvvTvD~p 160 (234)
+..+.|||.+
T Consensus 212 ~v~~WTvn~~ 221 (252)
T 3qvq_A 212 KVLAFTINDE 221 (252)
T ss_dssp EEEEECCCCH
T ss_pred EEEEEcCCCH
Confidence 9999998865
No 93
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=43.53 E-value=1.1e+02 Score=28.86 Aligned_cols=21 Identities=0% Similarity=-0.092 Sum_probs=16.8
Q ss_pred ceeecCcccCcceEecccccc
Q 026729 62 NTTVLGFKISMPIMIAPTAMQ 82 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~~ 82 (234)
..+|=|.++.-+|++|||+..
T Consensus 8 p~~ig~~~l~nRi~~apm~~~ 28 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHTG 28 (671)
T ss_dssp CEECSSCEESSSEEECCCCCS
T ss_pred CeeECCEEEcCceEECCccCC
Confidence 356667889999999999853
No 94
>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}
Probab=43.52 E-value=19 Score=27.14 Aligned_cols=25 Identities=20% Similarity=0.207 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHcCCcEEE-EeeCCC
Q 026729 136 NVVAQLVRRAERAGFKAIA-LTVDTP 160 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~Alv-vTvD~p 160 (234)
+...+|+++|++.|+.||| |-+|+.
T Consensus 62 eA~~rM~e~A~~lGANAVIgvrfdts 87 (111)
T 3qkb_A 62 EAKQKLKKKADLLEGDGIIGLKYNTE 87 (111)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEEhh
Confidence 4567899999999999976 445543
No 95
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=43.22 E-value=90 Score=26.64 Aligned_cols=84 Identities=12% Similarity=0.009 Sum_probs=51.0
Q ss_pred ceEecccccccccCchhHHHHHHHHHh-cCCce--EeCCCC---CCCHHHHH-------hcCC--CccEEEEeeeCCHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASA-AGTIM--TLSSWS---TSSVEEVA-------STGP--GIRFFQLYVYKDRNV 137 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~-~gi~~--~lSs~s---s~sle~ia-------~~~~--~~~wfQlY~~~d~~~ 137 (234)
|.++.|+.-.+-.+.++=..+++-.-+ .|+-- +.+|.+ +.|.||-. +... -+.+.+.- ..+-..
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKE 87 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHH
Confidence 455667654444566666677777777 78744 445433 34555432 2222 23444441 234466
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 88 ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78999999999999999984
No 96
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=42.98 E-value=95 Score=26.81 Aligned_cols=84 Identities=11% Similarity=0.017 Sum_probs=52.8
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcCC-CccEEEEeeeCCHHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTGP-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~~-~~~wfQlY~~~d~~~~ 138 (234)
.|.++.|+.-.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||- .+..+ -+.+...- ..+-..+
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~a 91 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAM 91 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHH
Confidence 34556676545545666666788877788874 4444444 3455442 22332 23445442 2355678
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 026729 139 AQLVRRAERAGFKAIALT 156 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvT 156 (234)
.++.+.|+++|++++++.
T Consensus 92 i~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 899999999999999985
No 97
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=42.61 E-value=1.1e+02 Score=26.19 Aligned_cols=87 Identities=10% Similarity=0.026 Sum_probs=55.1
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCceE--eCCCC---CCCHHHHH-------hc-CC-CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSSWS---TSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~--lSs~s---s~sle~ia-------~~-~~-~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+-.+.++=..+++---+.|+--+ .+|.+ +.|.||-. +. .+ -+.+...- ..+-..
T Consensus 9 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (300)
T 3eb2_A 9 FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVAD 87 (300)
T ss_dssp EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHH
T ss_pred EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 3455667654554566666677777777787444 33333 34555532 22 22 35677763 245667
Q ss_pred HHHHHHHHHHcCCcEEEEeeCC
Q 026729 138 VAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD~ 159 (234)
+.++.+.|+++|++++++..=.
T Consensus 88 ai~la~~a~~~Gadavlv~~P~ 109 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAILEA 109 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEcCCC
Confidence 8899999999999999997543
No 98
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=41.54 E-value=1.2e+02 Score=25.88 Aligned_cols=98 Identities=10% Similarity=0.010 Sum_probs=60.7
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCce--EeCCCC---CCCHHHHH-------hc-CC-CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIM--TLSSWS---TSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~--~lSs~s---s~sle~ia-------~~-~~-~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+ .+.++=..+++-.-+.|+-- +++|.+ +.|.||-. +. .+ -+.+...- ..+-..
T Consensus 7 ~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ 84 (291)
T 3a5f_A 7 GVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAA 84 (291)
T ss_dssp EEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred eeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 355667876667 78787778888877888754 444433 44555432 22 22 34555542 234567
Q ss_pred HHHHHHHHHHcCCcEEEEeeCCCCC-CchhhHhhccC
Q 026729 138 VAQLVRRAERAGFKAIALTVDTPRL-GRREADIKNRF 173 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD~pv~-G~Re~d~r~~f 173 (234)
+.++.+.|+++|++++++.. |.. .--+..+-..|
T Consensus 85 ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f 119 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVIT--PYYNKTTQKGLVKHF 119 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHC
T ss_pred HHHHHHHHHhcCCCEEEEcC--CCCCCCCHHHHHHHH
Confidence 78999999999999999984 432 12344455545
No 99
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=41.28 E-value=1.7e+02 Score=25.22 Aligned_cols=84 Identities=14% Similarity=-0.037 Sum_probs=54.4
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcCC--CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTGP--GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~~--~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+- ++.+|.+ +.|.||- .+... -+.+...- ..+-..+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5566777655556777777788887788874 5555554 3455543 22222 34555542 2355678
Q ss_pred HHHHHHHHHcCC-cEEEEee
Q 026729 139 AQLVRRAERAGF-KAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~-~AlvvTv 157 (234)
.++.+.|+++|+ +++++..
T Consensus 92 i~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEcC
Confidence 899999999997 9998874
No 100
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=40.98 E-value=1.1e+02 Score=26.74 Aligned_cols=84 Identities=21% Similarity=0.058 Sum_probs=51.6
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------HhcCC--CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------ASTGP--GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~~~--~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||- .+... -+.+...- ..+-..+
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 4455666544445656666777776677774 4455544 3455543 22222 34556652 2345667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 119 i~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8999999999999999874
No 101
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=40.68 E-value=1.1e+02 Score=26.53 Aligned_cols=83 Identities=16% Similarity=0.056 Sum_probs=52.7
Q ss_pred cceEeccccc-ccccCchhHHHHHHHHHhcCCceEeCCCC-----CCCHHHH-------HhcCC--CccEEEEeeeCCHH
Q 026729 72 MPIMIAPTAM-QKMAHPEGEYATARAASAAGTIMTLSSWS-----TSSVEEV-------ASTGP--GIRFFQLYVYKDRN 136 (234)
Q Consensus 72 ~Pi~iaP~g~-~~l~~p~gE~a~AraA~~~gi~~~lSs~s-----s~sle~i-------a~~~~--~~~wfQlY~~~d~~ 136 (234)
.|.++.|+.- .+-.+.++=..+++-.-+.|+--++-..+ +.|.||- .+... -+.+...= .+-.
T Consensus 16 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~ 93 (316)
T 3e96_A 16 SGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATS 93 (316)
T ss_dssp EECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHH
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHH
Confidence 3555667655 45456666667777777888855543332 3355442 22222 34566663 3667
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 026729 137 VVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvT 156 (234)
.+.++.+.|+++|++++++.
T Consensus 94 ~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEc
Confidence 77888999999999999986
No 102
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=40.46 E-value=25 Score=30.16 Aligned_cols=35 Identities=9% Similarity=-0.164 Sum_probs=28.6
Q ss_pred CCccEEEEeeeCCHHHHHHHHHHHHHcC-CcEEEEe
Q 026729 122 PGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALT 156 (234)
Q Consensus 122 ~~~~wfQlY~~~d~~~~~~li~rA~~aG-~~AlvvT 156 (234)
+-|.+..++..-|.+...++.++++++| +++|+++
T Consensus 160 ~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 160 GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 4467888887667777788899999999 9998875
No 103
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=39.76 E-value=1.4e+02 Score=23.93 Aligned_cols=85 Identities=11% Similarity=0.035 Sum_probs=48.8
Q ss_pred cccCcceEecccccccccCchhHHHHHHHHHhcCCceE-eCCC---CCCC---HHHHHhc---CC-CccEEEEeeeCCHH
Q 026729 68 FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSW---STSS---VEEVAST---GP-GIRFFQLYVYKDRN 136 (234)
Q Consensus 68 ~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~-lSs~---ss~s---le~ia~~---~~-~~~wfQlY~~~d~~ 136 (234)
.+..++|+++......+ +- ....+.++++|.-.+ +... ...+ ++++++. .+ ...-+..+..+..+
T Consensus 14 ~~~~~klg~~~~~~~~~---~~-~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~ 89 (257)
T 3lmz_A 14 AVNPFHLGMAGYTFVNF---DL-DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEE 89 (257)
T ss_dssp CCCSSEEEECGGGGTTS---CH-HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHH
T ss_pred CCCceEEEEEEEeecCC---CH-HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHH
Confidence 34567888888776643 22 234555666665443 2211 0112 3444432 22 22223344446778
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 026729 137 VVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvT 156 (234)
..++.++.|++.|++.|++.
T Consensus 90 ~~~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 90 EIDRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEec
Confidence 88899999999999998875
No 104
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=39.61 E-value=1.4e+02 Score=26.63 Aligned_cols=86 Identities=8% Similarity=-0.116 Sum_probs=54.1
Q ss_pred CcceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHHH-------hcCC--CccEEEEeeeCCHH
Q 026729 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEVA-------STGP--GIRFFQLYVYKDRN 136 (234)
Q Consensus 71 ~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~ia-------~~~~--~~~wfQlY~~~d~~ 136 (234)
-.|-++.|+.-.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||-. +... -+.....- ..+-.
T Consensus 63 i~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ 141 (360)
T 4dpp_A 63 VITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTG-SNSTR 141 (360)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHH
T ss_pred eEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHH
Confidence 345567787655555666666777777778874 4445544 34555422 2222 23444441 23556
Q ss_pred HHHHHHHHHHHcCCcEEEEee
Q 026729 137 VVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTv 157 (234)
.+.++.+.|+++|++++++..
T Consensus 142 eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 142 EAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcC
Confidence 778999999999999999873
No 105
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=37.54 E-value=49 Score=29.17 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=46.6
Q ss_pred HHHhcCCceEeCCCCCCCHHHHHhcCC-----------CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 96 AASAAGTIMTLSSWSTSSVEEVASTGP-----------GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 96 aA~~~gi~~~lSs~ss~sle~ia~~~~-----------~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
+-.+.+-.|+.=......+|++.+..| +..|+.+...-++....+++++.+++|+++|+++
T Consensus 226 vl~A~~~~~l~~nvp~~~l~~v~~~lPg~~~PTVspL~~~~wvAV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 297 (304)
T 1nh8_A 226 VVFGQQYLMLDYDCPRSALKKATAITPGLESPTIAPLADPDWVAIRALVPRRDVNGIMDELAAIGAKAILAS 297 (304)
T ss_dssp HHHHTTEEEEEEEEEGGGHHHHHHHCCCSSSCEEEECSSTTEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhcceEEEEEeCCHHHHHHHHHhccCCCCCeeeecCCCCeEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 344455566655556678999986542 2368888888888899999999999999999986
No 106
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=37.39 E-value=34 Score=28.86 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=22.7
Q ss_pred EEEEee---eCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 126 FFQLYV---YKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 126 wfQlY~---~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
-+=.|+ ..|.+.+.++++..+++|+++|-|.
T Consensus 18 ~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig 51 (268)
T 1qop_A 18 AFVPFVTLGDPGIEQSLKIIDTLIDAGADALELG 51 (268)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEEC
Confidence 344454 3344778899999999999998773
No 107
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=37.30 E-value=50 Score=30.62 Aligned_cols=106 Identities=18% Similarity=0.306 Sum_probs=43.7
Q ss_pred hhccccccccccCCC--CCCccceeec-CcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH
Q 026729 42 AFSRILFRPRILIDV--SKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (234)
Q Consensus 42 af~r~~l~prvL~dv--~~~d~sttl~-G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia 118 (234)
.|+++.|.|..- ++ +++|++|.+- +..+..|++.|||... -+.+ +|.+.++.|-.-++. .+.+.|+.+
T Consensus 11 t~~d~~~~p~~~-~~~~~~~~~~t~lt~~i~l~iPivsa~M~tV----Te~~--lA~ala~~GGiGvI~--~~~~~e~~a 81 (490)
T 4avf_A 11 TFDDVLLIPGYS-EVLPKDVSLKTRLTRGIELNIPLVSAAMDTV----TEAR--LAIAMAQEGGIGIIH--KNMGIEQQA 81 (490)
T ss_dssp CGGGEEECCCCB-CSCGGGSCCCEEEETTEEESSSEEECSCTTT----CSHH--HHHHHHHHTSEEEEC--CSSCHHHHH
T ss_pred CcceEEEeCCCC-cccccceeeecccccCcccCCCccccchhhh----CHHH--HHHHHHHcCCCcccc--CCCCHHHHH
Confidence 389999999753 34 3688888886 5689999999998642 1233 343444443333333 356666654
Q ss_pred hc------CCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 119 ST------GPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 119 ~~------~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
+. ......-.+.......-..+.++...+.++..+.|+
T Consensus 82 ~~v~~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVv 125 (490)
T 4avf_A 82 AEVRKVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVV 125 (490)
T ss_dssp HHHHHHHHCCC---------------------------------
T ss_pred HHhhhhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEE
Confidence 31 111000111111122234555566666677766554
No 108
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=37.18 E-value=30 Score=26.38 Aligned_cols=30 Identities=23% Similarity=0.467 Sum_probs=25.7
Q ss_pred eeCCHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 131 ~~~d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
+..|+++.+++++..++.|...+.+--|.-
T Consensus 8 fssdpeilkeivreikrqgvrvvllysdqd 37 (162)
T 2l82_A 8 FSSDPEILKEIVREIKRQGVRVVLLYSDQD 37 (162)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred ecCCHHHHHHHHHHHHhCCeEEEEEecCch
Confidence 368999999999999999999888888765
No 109
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=36.98 E-value=23 Score=30.12 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=44.3
Q ss_pred HHHHHHHHHhcCC---------ceEeCCCCCCCHHHHHhcCCCccEEEEeeeCC-----------------------HHH
Q 026729 90 EYATARAASAAGT---------IMTLSSWSTSSVEEVASTGPGIRFFQLYVYKD-----------------------RNV 137 (234)
Q Consensus 90 E~a~AraA~~~gi---------~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d-----------------------~~~ 137 (234)
+..+++.-.+.|. ..++||+....++.+.+..|.....+|+.... ...
T Consensus 150 ~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 229 (287)
T 2oog_A 150 EEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDL 229 (287)
T ss_dssp HHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGC
T ss_pred HHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhheEEcccHhhc
Confidence 4566777777665 47788887777887776656444444442111 112
Q ss_pred HHHHHHHHHHcCCcEEEEeeCCC
Q 026729 138 VAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD~p 160 (234)
+.+++++++++|.+..+.|||.+
T Consensus 230 ~~~~v~~~~~~G~~v~~wTvn~~ 252 (287)
T 2oog_A 230 TEQNTHHLKDLGFIVHPYTVNEK 252 (287)
T ss_dssp CHHHHHHHHHTTCEECCBCCCSH
T ss_pred CHHHHHHHHHCCCeEEEEeCCCH
Confidence 35677777777777777777653
No 110
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=36.79 E-value=87 Score=26.71 Aligned_cols=84 Identities=11% Similarity=-0.011 Sum_probs=49.6
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCce--EeCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIM--TLSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~--~lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+-- +++|.+ +.|.||- .+. .+ -+...+.- ..+-..+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 44556665444456566666777666677643 445544 3455442 222 22 34455541 2244667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 7888889999999998884
No 111
>1y2i_A Hypothetical protein S0862; structural genomics, pentamer, protein structure initiative, PSI, midwest center for structural genomics; 2.30A {Shigella flexneri 2a str} SCOP: d.230.5.1
Probab=36.72 E-value=25 Score=27.27 Aligned_cols=27 Identities=19% Similarity=0.277 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHcCCcEEE-EeeCCCCC
Q 026729 136 NVVAQLVRRAERAGFKAIA-LTVDTPRL 162 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~Alv-vTvD~pv~ 162 (234)
....+|.++|++.|+.||| |.+|....
T Consensus 84 ~Al~rm~~~A~~lGAnAVVGvr~d~~~i 111 (133)
T 1y2i_A 84 IAFEELGSQARALGADAVVGIDIDYETV 111 (133)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEEeeee
Confidence 4567899999999999975 56665543
No 112
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=36.46 E-value=57 Score=28.08 Aligned_cols=62 Identities=16% Similarity=0.120 Sum_probs=43.6
Q ss_pred chhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEE
Q 026729 87 PEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAI 153 (234)
Q Consensus 87 p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Al 153 (234)
.+|-..+.+.+.+.|++++.+-+...+++-+++.. -|+|+=-.. -.+.++++.+.+.|...+
T Consensus 72 ~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~~---d~~kIga~~--~~n~~ll~~~a~~~kPV~ 133 (280)
T 2qkf_A 72 EEGLKIFEKVKAEFGIPVITDVHEPHQCQPVAEVC---DVIQLPAFL--ARQTDLVVAMAKTGNVVN 133 (280)
T ss_dssp HHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHHC---SEEEECGGG--TTBHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhhC---CEEEECccc--ccCHHHHHHHHcCCCcEE
Confidence 56777789999999999999999989998887653 388872211 123457777755565433
No 113
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=35.99 E-value=1.2e+02 Score=25.91 Aligned_cols=65 Identities=12% Similarity=0.204 Sum_probs=45.4
Q ss_pred HHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 90 E~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
-.+++..+.+.++|++..+.++..+.+ ..+.+|++. +.|......+++-++..|.+-+++-.|..
T Consensus 84 ~~a~~~~~~~~~ip~is~~~~~~~l~~-----~~~~~~r~~-~~~~~~~~~~~~~~~~~g~~~v~ii~d~~ 148 (395)
T 3h6g_A 84 ANAVQSICNALGVPHIQTRWKHQVSDN-----KDSFYVSLY-PDFSSLSRAILDLVQFFKWKTVTVVYDDS 148 (395)
T ss_dssp HHHHHHHHHHTTCCEEECSCCCCCTTC-----CCCSEEEEE-ECHHHHHHHHHHHHHHTTCSEEEEEESST
T ss_pred HHHHHHHHhcCCCCeEeeccCcccccc-----cCceEEEec-CCHHHHHHHHHHHHHHCCCeEEEEEEECh
Confidence 456888999999999976555444431 234578875 45666677777777888988777766753
No 114
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=35.88 E-value=1.7e+02 Score=25.34 Aligned_cols=86 Identities=15% Similarity=-0.019 Sum_probs=55.2
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCceE--eCCCC---CCCHHHHH-------hc-CC-CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSSWS---TSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~--lSs~s---s~sle~ia-------~~-~~-~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+-.+.++=..+++-.-+.|+--+ .+|.+ +.|.||-. +. .+ -+.+.+.- ..+-..
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 4556677765555566666778888888888544 44433 34555432 22 22 35566652 235567
Q ss_pred HHHHHHHHHHcCCcEEEEeeC
Q 026729 138 VAQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD 158 (234)
+.++.+.|+++|++++++..=
T Consensus 108 ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHHhcCCCEEEECCC
Confidence 889999999999999999643
No 115
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=35.77 E-value=1e+02 Score=26.26 Aligned_cols=83 Identities=14% Similarity=0.007 Sum_probs=51.9
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+.-. -.+.++=..+++---+.|+- ++.+|.+ +.|.||- .+. .+ -+.+...- ..+-..+
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKS 86 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 4556676544 44666666777777778874 4444443 3455552 222 22 34555542 2355678
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 87 i~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 87 IQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8999999999999999974
No 116
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=35.51 E-value=36 Score=31.42 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=60.9
Q ss_pred ccccccccCCCCCCccceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeC-CCC--------------
Q 026729 46 ILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWS-------------- 110 (234)
Q Consensus 46 ~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lS-s~s-------------- 110 (234)
+.+.|+.. ....+.++++++|.++.-||++|+ |. ...|+ ..++..+.|..++.. |.+
T Consensus 68 ~~~~~~~~-~~~~~~l~~~i~Gl~~~NPvglAA-G~----dk~~~--~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~r 139 (443)
T 1tv5_A 68 YNILPYDT-SNDSIYACTNIKHLDFINPFGVAA-GF----DKNGV--CIDSILKLGFSFIEIGTITPRGQTGNAKPRIFR 139 (443)
T ss_dssp TTCSCCCC-SCCCGGGCEEETTEEESSSEEECT-TT----TTTCS--SHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEE
T ss_pred ccCCcccc-cCCCccCCeEECCEEeCCCcEECC-cc----cCccH--HHHHHHhcCCCEEEEeeeecCCCCCCCCccEEe
Confidence 45556532 223456799999999999999995 22 12222 223345666444331 111
Q ss_pred --------------CCCHHHHHh-------c-------CCCccEEEEeeeCC-HHHHHHHHHHHHHc--CCcEEEEeeCC
Q 026729 111 --------------TSSVEEVAS-------T-------GPGIRFFQLYVYKD-RNVVAQLVRRAERA--GFKAIALTVDT 159 (234)
Q Consensus 111 --------------s~sle~ia~-------~-------~~~~~wfQlY~~~d-~~~~~~li~rA~~a--G~~AlvvTvD~ 159 (234)
+..++.+.+ . .+.+...|+.-.++ .+...+..+-|+.. ++++|.|.+=+
T Consensus 140 l~e~~~iiN~~GfnN~G~~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNisc 219 (443)
T 1tv5_A 140 DVESRSIINSCGFNNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSS 219 (443)
T ss_dssp ETTTTEEEECCCSCBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCC
T ss_pred ccccceeeeccccCChhHHHHHHHHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccC
Confidence 122222221 1 12345678865432 12355666655554 59999999999
Q ss_pred CCC
Q 026729 160 PRL 162 (234)
Q Consensus 160 pv~ 162 (234)
|..
T Consensus 220 Pnt 222 (443)
T 1tv5_A 220 PNT 222 (443)
T ss_dssp TTS
T ss_pred CCC
Confidence 975
No 117
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=35.47 E-value=18 Score=31.59 Aligned_cols=70 Identities=19% Similarity=0.137 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHhcCCceEeCCCC----C-CCHHHH-------Hh--cCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEE
Q 026729 88 EGEYATARAASAAGTIMTLSSWS----T-SSVEEV-------AS--TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAI 153 (234)
Q Consensus 88 ~gE~a~AraA~~~gi~~~lSs~s----s-~sle~i-------a~--~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Al 153 (234)
+-=.++.+||++.+.|.|+...- - ..++.+ ++ ...-|..++| |.....+.+.+|-++||+-+
T Consensus 32 e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSV 107 (288)
T 3q94_A 32 EWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHL----DHGSSFEKCKEAIDAGFTSV 107 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEE----EEECSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEEC----CCCCCHHHHHHHHHcCCCeE
Confidence 44457888899999988885321 1 233322 23 2334566766 55556677888888899887
Q ss_pred EEeeCCCCCC
Q 026729 154 ALTVDTPRLG 163 (234)
Q Consensus 154 vvTvD~pv~G 163 (234)
++ |.....
T Consensus 108 Mi--DgS~~p 115 (288)
T 3q94_A 108 MI--DASHHP 115 (288)
T ss_dssp EE--CCTTSC
T ss_pred EE--eCCCCC
Confidence 76 444433
No 118
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=35.45 E-value=1e+02 Score=25.84 Aligned_cols=24 Identities=8% Similarity=0.180 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 133 KDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 133 ~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
.|.+.+.++++..+++|+++|-|.
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG 51 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIG 51 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CChHHHHHHHHHHHHcCCCEEEEC
Confidence 455678899999999999999883
No 119
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=35.12 E-value=2e+02 Score=24.77 Aligned_cols=85 Identities=14% Similarity=0.070 Sum_probs=53.7
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCceE--eCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~--lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~ 137 (234)
.|.++.|+.-.+-.+.++=..+++-.-+.|+--+ ++|.+ +.|.||- .+. .+ -+.+...- ..+-..
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 3555667654444566666677777778887544 44443 3455542 222 22 35566652 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 106 ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 88999999999999999874
No 120
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=34.64 E-value=74 Score=25.87 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=16.6
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 026729 138 VAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvT 156 (234)
..+.+++++++|+..|++|
T Consensus 154 ~~e~~~~~~~~G~~~i~~~ 172 (252)
T 1ka9_F 154 AVEWAVKGVELGAGEILLT 172 (252)
T ss_dssp HHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 4678889999999999998
No 121
>3nk6_A 23S rRNA methyltransferase; nosiheptide, nosiheptide-resistance methyltransferase, 23S R methyltransferase; 2.00A {Streptomyces actuosus} PDB: 3nk7_A* 3gyq_A*
Probab=34.64 E-value=1e+02 Score=26.32 Aligned_cols=70 Identities=16% Similarity=0.058 Sum_probs=49.5
Q ss_pred hcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEee-CCCCCCchhhHhhc
Q 026729 99 AAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKN 171 (234)
Q Consensus 99 ~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTv-D~pv~G~Re~d~r~ 171 (234)
--|+...+......+++++.+. +.+ ++=|.-..|+.-+-.++|-|...|+++|+++= ++. ...-.+-+|.
T Consensus 96 ~qGv~a~~~~~~~~~l~~~~~~-~~~-~lvLd~v~dP~NlGaI~Rta~a~G~~~vil~~~~~~-~~~~~~v~ra 166 (277)
T 3nk6_A 96 KAKVFGIARVPRPARLADIAER-GGD-VVVLDGVKIVGNIGAIVRTSLALGAAGIVLVDSDLA-TIADRRLLRA 166 (277)
T ss_dssp -CCEEEEEECCCCCCHHHHHHH-CSC-EEEEESCCCHHHHHHHHHHHHHTTCSEEEEESCCCS-CTTCHHHHHH
T ss_pred CCeEEEEEecCCCCCHHHHhcc-CCC-EEEEEcCCCcchHHHHHHHHHHcCCCEEEEcCCCCc-CCCCHHHHHH
Confidence 3567777776656688888643 234 77777789999999999999999999999986 432 2233344454
No 122
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=34.60 E-value=1.3e+02 Score=25.73 Aligned_cols=83 Identities=14% Similarity=0.065 Sum_probs=52.1
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCceE--eCCCC---CCCHHHHH-------hcCCC---ccEEEEeeeCCHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSSWS---TSSVEEVA-------STGPG---IRFFQLYVYKDRNV 137 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~--lSs~s---s~sle~ia-------~~~~~---~~wfQlY~~~d~~~ 137 (234)
|.++.|+ -.+-.+.++=..+++-.-+.|+--+ .+|.+ +.|.||-. +...+ +.+...- ..+-..
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ 91 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHE 91 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHH
Confidence 4556677 4554566666777877778887544 34443 34555432 22222 3445442 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 92 ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 88999999999999999984
No 123
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=34.44 E-value=44 Score=23.97 Aligned_cols=47 Identities=21% Similarity=0.207 Sum_probs=29.4
Q ss_pred EEeeeCC---HH----HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 128 QLYVYKD---RN----VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 128 QlY~~~d---~~----~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.+|+.++ ++ +...+++.|++.|++.|.++|+......+.-=.|.||.
T Consensus 90 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~ 143 (153)
T 1z4e_A 90 GVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFK 143 (153)
T ss_dssp EEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETTCTTHHHHHHHHTCE
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEccCChHHHHHHHHcCCc
Confidence 5666543 23 44555667777899999999986543333334566763
No 124
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=34.08 E-value=45 Score=24.84 Aligned_cols=49 Identities=12% Similarity=0.059 Sum_probs=33.8
Q ss_pred EEEEeeeCC-H----HHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 126 FFQLYVYKD-R----NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 126 wfQlY~~~d-~----~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
...+|+.++ + .+...+++.|++.|++.|.++|+....+.+.-=.|.||.
T Consensus 108 i~~l~V~p~~~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 161 (188)
T 3h4q_A 108 IHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFH 161 (188)
T ss_dssp EEEEECCSSCTTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTCE
T ss_pred EEEEEECCccCcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCe
Confidence 445666544 3 355566677777899999999987765555556677874
No 125
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=34.06 E-value=75 Score=27.21 Aligned_cols=29 Identities=14% Similarity=0.092 Sum_probs=23.8
Q ss_pred eCCHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 132 YKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 132 ~~d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
+.....+.+++++|.+.|.+..+.||+.+
T Consensus 211 ~~~~~~~~~~V~~ah~~G~~V~vWTv~t~ 239 (292)
T 3mz2_A 211 PKITPEVREVIDMLHERGVMCMISTAPSD 239 (292)
T ss_dssp SSCCHHHHHHHHHHHHTTBCEEEECTTTG
T ss_pred ccccccCHHHHHHHHHCCCEEEEEeCCCc
Confidence 33445678999999999999999998865
No 126
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=34.03 E-value=1.6e+02 Score=25.32 Aligned_cols=83 Identities=12% Similarity=0.070 Sum_probs=51.1
Q ss_pred ceEeccc-ccccccCchhHHHHHHHHHhcCCceEe--CCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHH
Q 026729 73 PIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTL--SSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 73 Pi~iaP~-g~~~l~~p~gE~a~AraA~~~gi~~~l--Ss~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~ 137 (234)
|.++.|+ .-.+-.+.++=..+++-.-+.|+--++ +|.+ +.|.||- .+. .+ -+.....- .+-..
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg--~st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG--YSVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC--cCHHH
Confidence 4445666 434444666666777777778875544 3322 4455543 222 22 34566653 25566
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 95 ai~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 78899999999999999874
No 127
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=33.67 E-value=47 Score=29.69 Aligned_cols=34 Identities=6% Similarity=0.061 Sum_probs=28.6
Q ss_pred CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 123 ~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
-|.+..+-+.-+.+...++.+.++++|+++|++|
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4678888766666678899999999999999987
No 128
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=33.50 E-value=1.7e+02 Score=24.79 Aligned_cols=84 Identities=13% Similarity=0.046 Sum_probs=52.0
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCceEe--CCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~l--Ss~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+ -.+-.+.++=..+++-.-+.|+--++ +|.+ +.|.||- .+. .+ -+.+...- ..+-..+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4556676 44545666666777777777875544 3322 3455442 222 22 34566652 2344667
Q ss_pred HHHHHHHHHcCCcEEEEeeC
Q 026729 139 AQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTvD 158 (234)
.++.+.|+++|++++++..=
T Consensus 85 i~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHcCCCEEEEcCC
Confidence 88999999999999988754
No 129
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.45 E-value=42 Score=27.09 Aligned_cols=86 Identities=9% Similarity=0.139 Sum_probs=56.0
Q ss_pred ceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCC-CCCCHHHHHhcCCCccEEEEeeeCCHHHHHH
Q 026729 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW-STSSVEEVASTGPGIRFFQLYVYKDRNVVAQ 140 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~-ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~ 140 (234)
+..++-+.++.|+.-=|+++. |-=.++.+|-...+-.-+++-. -...++.+....+- =++.|...+.+...+
T Consensus 61 ta~~lr~~~~iPVV~I~~s~~-----Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~--~i~~~~~~~~~e~~~ 133 (196)
T 2q5c_A 61 TSDYIKKSVSIPSISIKVTRF-----DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGV--KIKEFLFSSEDEITT 133 (196)
T ss_dssp HHHHHHTTCSSCEEEECCCHH-----HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTC--EEEEEEECSGGGHHH
T ss_pred HHHHHHHhCCCCEEEEcCCHh-----HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCC--ceEEEEeCCHHHHHH
Confidence 344555678899987776644 3334566665544433334332 23456777665442 256677788888999
Q ss_pred HHHHHHHcCCcEEE
Q 026729 141 LVRRAERAGFKAIA 154 (234)
Q Consensus 141 li~rA~~aG~~Alv 154 (234)
.++++++.||+++|
T Consensus 134 ~i~~l~~~G~~vvV 147 (196)
T 2q5c_A 134 LISKVKTENIKIVV 147 (196)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHCCCeEEE
Confidence 99999999999866
No 130
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=33.33 E-value=20 Score=31.86 Aligned_cols=65 Identities=15% Similarity=0.084 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHhcCCceEeCCCCC----CCHHHH-------Hhc-CCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEE
Q 026729 88 EGEYATARAASAAGTIMTLSSWST----SSVEEV-------AST-GPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (234)
Q Consensus 88 ~gE~a~AraA~~~gi~~~lSs~ss----~sle~i-------a~~-~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alvv 155 (234)
+.=.++.+||++.+.|.|+..... .+.+.+ ++. ..-|..++| |.....+++++|-++||+-+++
T Consensus 29 e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMi 104 (323)
T 2isw_A 29 EQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHL----DHGDTLESVKMAIDLGFSSVMI 104 (323)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEE----EEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEEC----CCCCCHHHHHHHHHcCCCeEEe
Confidence 344577788888888887753221 111111 122 223455665 5555566777777888887665
Q ss_pred e
Q 026729 156 T 156 (234)
Q Consensus 156 T 156 (234)
.
T Consensus 105 D 105 (323)
T 2isw_A 105 D 105 (323)
T ss_dssp C
T ss_pred c
Confidence 4
No 131
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=33.01 E-value=1.8e+02 Score=27.94 Aligned_cols=20 Identities=5% Similarity=0.022 Sum_probs=17.1
Q ss_pred ceeecCcccCcceEeccccc
Q 026729 62 NTTVLGFKISMPIMIAPTAM 81 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~ 81 (234)
..+|=|.++.-+|++|||+.
T Consensus 12 p~~ig~~~l~NRiv~apm~~ 31 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCI 31 (729)
T ss_dssp CEEETTEEESSSEEECCCCC
T ss_pred CeeECCEEECCccEECCCcC
Confidence 36777889999999999875
No 132
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=33.01 E-value=72 Score=21.29 Aligned_cols=31 Identities=26% Similarity=0.577 Sum_probs=25.5
Q ss_pred EEEEe--eeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 126 FFQLY--VYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 126 wfQlY--~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
|+.++ +..+++...+++++.++.|+++++++
T Consensus 45 ~yRV~vGpf~~~~~A~~~~~~L~~~g~~~~iv~ 77 (79)
T 1x60_A 45 LYKVQIGAFSSKDNADTLAARAKNAGFDAIVIL 77 (79)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHHHcCCceEEEe
Confidence 55555 46799999999999999999999875
No 133
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=32.50 E-value=29 Score=28.12 Aligned_cols=23 Identities=26% Similarity=0.505 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCcEEEEeeCCC
Q 026729 138 VAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD~p 160 (234)
..+++++|++.|+++|++|==.+
T Consensus 20 ~~e~v~~A~~~Gl~~iaiTDH~~ 42 (245)
T 1m65_A 20 LSDYIAQAKQKGIKLFAITDHGP 42 (245)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECT
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
Confidence 46999999999999999985444
No 134
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=32.46 E-value=43 Score=28.96 Aligned_cols=36 Identities=8% Similarity=-0.077 Sum_probs=27.3
Q ss_pred CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 122 PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 122 ~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
+-|.+..+-..-+.+...++.++++++|+++|.|+-
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 346788875444455678889999999999999973
No 135
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=32.41 E-value=95 Score=23.80 Aligned_cols=61 Identities=16% Similarity=0.133 Sum_probs=38.3
Q ss_pred HhcCCceEeCCCCCCCHHHHH-hcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeC
Q 026729 98 SAAGTIMTLSSWSTSSVEEVA-STGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 98 ~~~gi~~~lSs~ss~sle~ia-~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD 158 (234)
...|.+..+-+.....+.+.. ...++...+=+-..+.-..+.+.++.|++.|++.|.||-.
T Consensus 62 ~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 62 NSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp HHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred HhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 457777666542222332222 2234444444544566667889999999999999999964
No 136
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=32.29 E-value=67 Score=29.27 Aligned_cols=104 Identities=19% Similarity=0.268 Sum_probs=58.3
Q ss_pred hhccccccccccC-CCCCCccceeecC-cccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHh
Q 026729 42 AFSRILFRPRILI-DVSKIDMNTTVLG-FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (234)
Q Consensus 42 af~r~~l~prvL~-dv~~~d~sttl~G-~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~ 119 (234)
.|+++.|+|.... +.+++|++|.|-. ..+..||+.+||.. ..+.|++ .+..+.|-.-++.. ..+.|++++
T Consensus 13 ~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~----vt~~eLa--~av~~~Gg~G~i~~--~~~~e~~~~ 84 (491)
T 1zfj_A 13 TFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDT----VTGSKMA--IAIARAGGLGVIHK--NMSITEQAE 84 (491)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTT----TCSHHHH--HHHHHTTCEEEECC--SSCHHHHHH
T ss_pred ChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchh----ccHHHHH--HHHHHcCCceEEeC--CCCHHHHHH
Confidence 4899999998643 3357788887754 47889999999883 2223433 34445544333432 245554432
Q ss_pred -------cCC--CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 120 -------TGP--GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 120 -------~~~--~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
... .+..+-+ ..+ .-..+.++...+.++..+.|.
T Consensus 85 ~i~~v~~~~~im~~~~~~v--~~~-~tv~ea~~~m~~~~~~~~pVv 127 (491)
T 1zfj_A 85 EVRKVKRSENGVIIDPFFL--TPE-HKVSEAEELMQRYRISGVPIV 127 (491)
T ss_dssp HHHHHHHHTTTTSSSCCCB--CSS-SBHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHhhHHhcCcCCCeEE--CCC-CcHHHHHHHHHHcCCCEEEEE
Confidence 111 1111111 122 224566666667788777765
No 137
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=32.04 E-value=1.1e+02 Score=26.51 Aligned_cols=84 Identities=13% Similarity=0.008 Sum_probs=51.3
Q ss_pred ceEecccc-cccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHHH-------hc-CC-CccEEEEeeeCCHHH
Q 026729 73 PIMIAPTA-MQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (234)
Q Consensus 73 Pi~iaP~g-~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~ia-------~~-~~-~~~wfQlY~~~d~~~ 137 (234)
|-++.|+. -.+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||-. +. .+ -+.+...- ..+-..
T Consensus 16 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 94 (318)
T 3qfe_A 16 CPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQ 94 (318)
T ss_dssp EECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 44555654 33444556666777777778874 4444443 34555422 22 22 34566652 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
+.++.+.|+++|++++++..
T Consensus 95 ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeC
Confidence 88999999999999999854
No 138
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=31.79 E-value=1.2e+02 Score=25.71 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=45.5
Q ss_pred cEEEEee---eCCHHHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCCCcCccccccccccCCCcccCcccHH
Q 026729 125 RFFQLYV---YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLA 201 (234)
Q Consensus 125 ~wfQlY~---~~d~~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (234)
..|=.|+ ..|.+.+.++++..+++ +++|-|.+ | |+.|.. .+..+.
T Consensus 16 ~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~--P------------fsdP~a-----------------dGp~Iq 63 (271)
T 1ujp_A 16 AALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGL--P------------YSDPLG-----------------DGPVIQ 63 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEEC--C------------CCC---------------------CHHHH
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECC--C------------CCCccc-----------------ccHHHH
Confidence 4566676 45667788888888888 99888832 2 222210 011111
Q ss_pred HHhhhcCCCCCC----hHHHHHHHHhCCCccccccc
Q 026729 202 AYVAGQIDRSLS----WKNILCLYQDFSFECDVMLY 233 (234)
Q Consensus 202 ~~~~~~~~~~~t----W~di~wlr~~w~l~~~~~~~ 233 (234)
..........++ -+.++.+|+..++||++|.|
T Consensus 64 ~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y 99 (271)
T 1ujp_A 64 RASELALRKGMSVQGALELVREVRALTEKPLFLMTY 99 (271)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEec
Confidence 111111122233 35699999999999999987
No 139
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.65 E-value=58 Score=27.11 Aligned_cols=136 Identities=13% Similarity=0.112 Sum_probs=76.2
Q ss_pred CChHHHHHHHHHhCChhh----hhhhcCCCCchHHHHHHHHhhccccccccccCCCCCCccceeecCcccCcceEecccc
Q 026729 5 TNVMEYEAIAKEKLPKMV----FDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTA 80 (234)
Q Consensus 5 ~~i~D~e~~Ar~~Lp~~~----~~Yi~gGa~de~t~~~N~~af~r~~l~prvL~dv~~~d~sttl~G~~~~~Pi~iaP~g 80 (234)
.+..++.+.+++..+... ...+.++-++.....++. .+.= ...++. + +--+..++-..++.||.-=|++
T Consensus 19 ~~~~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~--~~~~--~~dVII--S-RGgta~~Lr~~~~iPVV~I~vs 91 (225)
T 2pju_A 19 VSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKK--LANE--RCDAII--A-AGSNGAYLKSRLSVPVILIKPS 91 (225)
T ss_dssp ECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHH--TTTS--CCSEEE--E-EHHHHHHHHTTCSSCEEEECCC
T ss_pred EchHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHH--HhcC--CCeEEE--e-CChHHHHHHhhCCCCEEEecCC
Confidence 356777778888777532 122334444444433222 2210 012221 1 1223445556789999876666
Q ss_pred cccccCchhHHHHHHHHHhcCCceEeCCCC-CCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEE
Q 026729 81 MQKMAHPEGEYATARAASAAGTIMTLSSWS-TSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIA 154 (234)
Q Consensus 81 ~~~l~~p~gE~a~AraA~~~gi~~~lSs~s-s~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alv 154 (234)
+. |-=.++.+|-+..+-.-+++-.+ ...++.+....+- . ++.|...+.+...+.++++++.||+++|
T Consensus 92 ~~-----Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~-~-i~~~~~~~~ee~~~~i~~l~~~G~~vVV 159 (225)
T 2pju_A 92 GY-----DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNL-R-LDQRSYITEEDARGQINELKANGTEAVV 159 (225)
T ss_dssp HH-----HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTC-C-EEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred HH-----HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCC-c-eEEEEeCCHHHHHHHHHHHHHCCCCEEE
Confidence 43 33345665544444344444333 2345666554431 1 5667789999999999999999999876
No 140
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=31.57 E-value=86 Score=27.01 Aligned_cols=22 Identities=23% Similarity=0.403 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEe
Q 026729 135 RNVVAQLVRRAERAGFK--AIALT 156 (234)
Q Consensus 135 ~~~~~~li~rA~~aG~~--AlvvT 156 (234)
.+...+.+++|+++|++ -|++.
T Consensus 162 ~~~l~~~i~~a~~~Gi~~~~IilD 185 (282)
T 1aj0_A 162 NRYFIEQIARCEQAGIAKEKLLLD 185 (282)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe
Confidence 45677889999999998 78887
No 141
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=31.56 E-value=33 Score=28.12 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCcEEEEeeCCCCC
Q 026729 138 VAQLVRRAERAGFKAIALTVDTPRL 162 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD~pv~ 162 (234)
..+++++|++.|+++|++|==.+..
T Consensus 18 ~ee~v~~A~~~Gl~~iaiTDH~~~~ 42 (267)
T 2yxo_A 18 PEAYLEEARAKGLKGVVFTDHSPMP 42 (267)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCCC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 4589999999999999998644443
No 142
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=31.39 E-value=75 Score=26.18 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=43.3
Q ss_pred HHHHHHHHhcCC--ceEeCCCCCCCHHHHHhcCCCccEEEEe------------------eeCCHHH-HHHHHHHHHHcC
Q 026729 91 YATARAASAAGT--IMTLSSWSTSSVEEVASTGPGIRFFQLY------------------VYKDRNV-VAQLVRRAERAG 149 (234)
Q Consensus 91 ~a~AraA~~~gi--~~~lSs~ss~sle~ia~~~~~~~wfQlY------------------~~~d~~~-~~~li~rA~~aG 149 (234)
..+++..++.|. ..++||+....++.+.+..|...-.+++ ...-... +.+++++++++|
T Consensus 115 ~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~G 194 (248)
T 1zcc_A 115 AKVAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKSPSLVGAVHHASIIEITPAQMRRPGIIEASRKAG 194 (248)
T ss_dssp HHHHHHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSSTHHHHHTTCCSEEEECHHHHHSHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCccHHHHHHHcCCCEEEecHHHhCCHHHHHHHHHCC
Confidence 445555555543 4677887777777776544432111111 1111223 578999999999
Q ss_pred CcEEEEeeCCC
Q 026729 150 FKAIALTVDTP 160 (234)
Q Consensus 150 ~~AlvvTvD~p 160 (234)
.+..+.|||.+
T Consensus 195 ~~v~~wTvn~~ 205 (248)
T 1zcc_A 195 LEIMVYYGGDD 205 (248)
T ss_dssp CEEEEECCCCC
T ss_pred CEEEEECCCCH
Confidence 99999999875
No 143
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=31.28 E-value=24 Score=31.07 Aligned_cols=22 Identities=0% Similarity=-0.158 Sum_probs=19.9
Q ss_pred CCCCChHHHHHHHHhCCCcccc
Q 026729 209 DRSLSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 209 ~~~~tW~di~wlr~~w~l~~~~ 230 (234)
.|.|+++-|+.|++..+.|+|.
T Consensus 186 ~p~L~~~~L~~I~~~~~vpLVl 207 (305)
T 1rvg_A 186 RPFIDHARLERIARLVPAPLVL 207 (305)
T ss_dssp SCCCCHHHHHHHHHHCCSCEEE
T ss_pred CCccCHHHHHHHHHhcCCCEEE
Confidence 5889999999999999999875
No 144
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=30.87 E-value=66 Score=27.94 Aligned_cols=40 Identities=23% Similarity=0.414 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHHHH---HcCCcEEEEeeCCCCCCchhhHhhccCCCC
Q 026729 133 KDRNVVAQLVRRAE---RAGFKAIALTVDTPRLGRREADIKNRFTLP 176 (234)
Q Consensus 133 ~d~~~~~~li~rA~---~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p 176 (234)
++. ..+++|+||+ +||+.+|++-. .| ..=-+.+....++|
T Consensus 174 rt~-~a~~~i~rA~a~~eAGA~~ivlE~-vp--~~~a~~it~~l~iP 216 (281)
T 1oy0_A 174 RGD-AAEQTIADAIAVAEAGAFAVVMEM-VP--AELATQITGKLTIP 216 (281)
T ss_dssp -CH-HHHHHHHHHHHHHHHTCSEEEEES-CC--HHHHHHHHHHCSSC
T ss_pred CcH-HHHHHHHHHHHHHHcCCcEEEEec-CC--HHHHHHHHHhCCCC
Confidence 444 5688888884 78999999976 22 11223344445555
No 145
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=30.81 E-value=1.7e+02 Score=24.94 Aligned_cols=83 Identities=14% Similarity=0.031 Sum_probs=51.5
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCceE--eCCCC---CCCHHHH-------Hhc-CC-CccEEEEeeeCCHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSSWS---TSSVEEV-------AST-GP-GIRFFQLYVYKDRNVV 138 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~--lSs~s---s~sle~i-------a~~-~~-~~~wfQlY~~~d~~~~ 138 (234)
|.++.|+ -.+-.+.++=..+++---+.|+--+ .+|.+ +.|.||- .+. .+ -+.+.+.- ..+-..+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 4556677 4454566666677777777787544 34432 4455543 222 22 34566652 2344667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q 026729 139 AQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTv 157 (234)
.++.+.|+++|++++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999884
No 146
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=30.51 E-value=1.3e+02 Score=24.14 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=20.3
Q ss_pred EEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 127 FQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 127 fQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
+..|.....+..++.++.|++.|++.|++.
T Consensus 82 ~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~ 111 (262)
T 3p6l_A 82 TGVYVAEKSSDWEKMFKFAKAMDLEFITCE 111 (262)
T ss_dssp EEEECCSSTTHHHHHHHHHHHTTCSEEEEC
T ss_pred EeccCCccHHHHHHHHHHHHHcCCCEEEec
Confidence 334444455667778888888888877775
No 147
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=30.42 E-value=59 Score=28.18 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=17.0
Q ss_pred HHHHHHHHHH---HHcCCcEEEEee
Q 026729 136 NVVAQLVRRA---ERAGFKAIALTV 157 (234)
Q Consensus 136 ~~~~~li~rA---~~aG~~AlvvTv 157 (234)
+..+++|+|| ++||+.+|++-.
T Consensus 158 ~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 158 GKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp -CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEec
Confidence 4457888888 479999999976
No 148
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=30.40 E-value=74 Score=25.12 Aligned_cols=65 Identities=23% Similarity=0.302 Sum_probs=43.5
Q ss_pred CCCCCHHHHHhc-------CC-CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCC-CCCchhhHhhccCCCC
Q 026729 109 WSTSSVEEVAST-------GP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP-RLGRREADIKNRFTLP 176 (234)
Q Consensus 109 ~ss~sle~ia~~-------~~-~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~p-v~G~Re~d~r~~f~~p 176 (234)
+++.+++||.+. .+ ...+|| ....+...+.|+.|...|+++|++.-=+- ..+..-+|-=..+..|
T Consensus 21 YG~~tl~di~~~l~~~a~~~g~~v~~~Q---SN~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P 94 (149)
T 2uyg_A 21 YGRTTLEELEALCEAWGAELGLGVVFRQ---TNYEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLP 94 (149)
T ss_dssp SCSCCHHHHHHHHHHHHHHTTCCEEEEE---CSCHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSC
T ss_pred CCcCCHHHHHHHHHHHHHHcCCEEEEEe---eCCHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCC
Confidence 456788887532 12 456777 56666777778877766788999875554 4566667766666666
No 149
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=30.37 E-value=29 Score=30.64 Aligned_cols=22 Identities=5% Similarity=0.105 Sum_probs=18.5
Q ss_pred CCCCChHHHHHHHHhC--CCcccc
Q 026729 209 DRSLSWKNILCLYQDF--SFECDV 230 (234)
Q Consensus 209 ~~~~tW~di~wlr~~w--~l~~~~ 230 (234)
.|.|+++-|+.|++.. +.|+|.
T Consensus 203 ~p~Ld~~~L~~I~~~v~~~vpLVl 226 (306)
T 3pm6_A 203 GVQLDYERLQRINEAVGERVGLVL 226 (306)
T ss_dssp CCCCCHHHHHHHHHHHTTTSEEEE
T ss_pred CCccCHHHHHHHHHHhCCCCCEEe
Confidence 4789999999999997 588774
No 150
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=30.07 E-value=40 Score=27.83 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=41.5
Q ss_pred HHHHHHHHhcCC--ceEeCCCCCCCHHHHHhcCCCccEEEEeee---------------CCHH---HHHHHHHHHHHcCC
Q 026729 91 YATARAASAAGT--IMTLSSWSTSSVEEVASTGPGIRFFQLYVY---------------KDRN---VVAQLVRRAERAGF 150 (234)
Q Consensus 91 ~a~AraA~~~gi--~~~lSs~ss~sle~ia~~~~~~~wfQlY~~---------------~d~~---~~~~li~rA~~aG~ 150 (234)
..+.+.-.+.|. ..+++|+....++.+.+..|...-..|+.. .+.. .+.+++++++++|.
T Consensus 118 ~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~ 197 (238)
T 3no3_A 118 RLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVSYLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLGM 197 (238)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEEECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTC
T ss_pred HHHHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCCC
Confidence 345555566654 367777776667777655443211111100 0111 13578899999999
Q ss_pred cEEEEeeCCC
Q 026729 151 KAIALTVDTP 160 (234)
Q Consensus 151 ~AlvvTvD~p 160 (234)
+..+.|||.+
T Consensus 198 ~v~~WTVn~~ 207 (238)
T 3no3_A 198 TSNVWTVDDP 207 (238)
T ss_dssp EEEEECCCSH
T ss_pred EEEEECCCCH
Confidence 9999999865
No 151
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=30.06 E-value=49 Score=23.21 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHcCCcEEEEeeC--CCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVD--TPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD--~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.+.++++ ..-...+.--.|.||.
T Consensus 101 ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF~ 140 (150)
T 3t9y_A 101 LLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGYV 140 (150)
T ss_dssp HHHHHHHHHHHTTCSCEEECCCCCC------------CCC
T ss_pred HHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCCE
Confidence 4455666677789999999998 5444444444566664
No 152
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=29.59 E-value=22 Score=31.45 Aligned_cols=22 Identities=5% Similarity=0.055 Sum_probs=19.0
Q ss_pred CCCCChHHHHHHHHhCCCcccc
Q 026729 209 DRSLSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 209 ~~~~tW~di~wlr~~w~l~~~~ 230 (234)
.|.|+++-|+.|++..+.|+|.
T Consensus 188 ~p~Ld~~~L~~I~~~~~~PLVl 209 (307)
T 3n9r_A 188 EPKLDFERLQEVKRLTNIPLVL 209 (307)
T ss_dssp SCCCCHHHHHHHHHHHCSCEEE
T ss_pred CCccCHHHHHHHHhcCCCCeEE
Confidence 4789999999999888899875
No 153
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=29.40 E-value=90 Score=26.22 Aligned_cols=91 Identities=10% Similarity=0.075 Sum_probs=45.2
Q ss_pred ceeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceE-eCC-CC---CCCHHHHHhcCCC---ccEEEEeeeC
Q 026729 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSS-WS---TSSVEEVASTGPG---IRFFQLYVYK 133 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~-lSs-~s---s~sle~ia~~~~~---~~wfQlY~~~ 133 (234)
.++|.|+++..|++++..|. |+.|.-. ++..+.|.-++ ++- .+ ..+++++.+..+. +...+.....
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~-----p~~~~~~-~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~ 76 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKY-----PSFDIQK-EAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGAS 76 (264)
T ss_dssp CEEETTEEESCCEEEECSCS-----SCHHHHH-HHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCS
T ss_pred CeEECCEEecCCCEEEecCC-----CCHHHHH-HHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccC
Confidence 46799999999999988774 4554432 45455554333 221 11 3455666544331 1112222224
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeeCC
Q 026729 134 DRNVVAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 134 d~~~~~~li~rA~~aG~~AlvvTvD~ 159 (234)
+.+.....++.++++|...+ +++|.
T Consensus 77 ~~~~~~~f~~~a~~agg~~~-i~l~i 101 (264)
T 1xm3_A 77 TAEEAVRIARLAKASGLCDM-IKVEV 101 (264)
T ss_dssp SHHHHHHHHHHHHHTTCCSS-EEECC
T ss_pred CHHHHHHHHHHHHHcCCCCe-EEEee
Confidence 44444467788888754433 34443
No 154
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=29.37 E-value=48 Score=23.83 Aligned_cols=38 Identities=18% Similarity=0.136 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.|.++|+.....-+.--.|.||.
T Consensus 109 ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF~ 146 (166)
T 3jvn_A 109 LMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGLN 146 (166)
T ss_dssp HHHHHHHHHHTTTCSEEEECCC--CCBC----------
T ss_pred HHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCCe
Confidence 44566666677899999999976654444444566664
No 155
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=28.30 E-value=49 Score=24.18 Aligned_cols=38 Identities=11% Similarity=0.005 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.|.++++..-..-+.-=.|.||.
T Consensus 116 Ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~ 153 (166)
T 4evy_A 116 LIRQAEVWAKQFSCTEFASDAALDNVISHAMHRSLGFQ 153 (166)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHcCCE
Confidence 44555666777899999999987643333444566663
No 156
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=28.25 E-value=70 Score=23.05 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.|.++++... ..+.--.|.||.
T Consensus 112 ll~~~~~~~~~~g~~~i~l~~~~~n-~a~~~y~k~GF~ 148 (158)
T 1vkc_A 112 LLRKAEEWAKERGAKKIVLRVEIDN-PAVKWYEERGYK 148 (158)
T ss_dssp HHHHHHHHHHHTTCSCEEECCCTTC-THHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCcEEEEEEeCCC-cHHHHHHHCCCE
Confidence 4455666677789999999988765 555555678885
No 157
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=28.23 E-value=92 Score=27.07 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHcCCc--EEEEe
Q 026729 136 NVVAQLVRRAERAGFK--AIALT 156 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~--AlvvT 156 (234)
+...+.+++|+++|++ -|++.
T Consensus 182 ~~l~~~i~~a~~~GI~~~~IilD 204 (297)
T 1tx2_A 182 ADLYDSIKIAKDAGVRDENIILD 204 (297)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHcCCChhcEEEe
Confidence 5667889999999998 68877
No 158
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=28.20 E-value=78 Score=27.90 Aligned_cols=21 Identities=19% Similarity=0.466 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCc--EEEEe
Q 026729 136 NVVAQLVRRAERAGFK--AIALT 156 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~--AlvvT 156 (234)
+...+.+++|+++|.+ -|+|.
T Consensus 177 ~~l~~~i~~a~~~GI~~~~IilD 199 (314)
T 3tr9_A 177 KELQESIQRCKKAGISEDRIIID 199 (314)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHcCCCHhHEEEe
Confidence 4567889999999997 67754
No 159
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=28.00 E-value=46 Score=27.84 Aligned_cols=25 Identities=28% Similarity=0.411 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPR 161 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv 161 (234)
...+.+++|++.+.++|+|++|+|-
T Consensus 26 ~l~~~l~~a~~~~~~~Ivl~inspG 50 (230)
T 3viv_A 26 QFDRYITIAEQDNAEAIIIELDTPG 50 (230)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEBSC
T ss_pred HHHHHHHHHhcCCCCEEEEEEeCCC
Confidence 4456677888788999999999994
No 160
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=27.67 E-value=91 Score=34.43 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=61.3
Q ss_pred cccccccCCCCC---Cccc-eeecCcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHh---
Q 026729 47 LFRPRILIDVSK---IDMN-TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS--- 119 (234)
Q Consensus 47 ~l~prvL~dv~~---~d~s-ttl~G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~--- 119 (234)
.+.||+.+--.. .+|. |.+||. .||+.+||+.. -.+..++.|+..+|-.-++...+..+.|++.+
T Consensus 564 ~f~PrLv~~~~g~~~~~t~~t~llg~---~PIi~~gM~~~-----~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~ 635 (2051)
T 2uv8_G 564 EYHPKLIKNKSGKIFVETKFSKLIGR---PPLLVPGMTPC-----TVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAID 635 (2051)
T ss_dssp HTCCEEEECSSCCEEEECHHHHHHSS---CSEEECCCHHH-----HTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHH
T ss_pred ccCCccccCCCCchhHHHHHHHhhCc---cceecCCCccc-----cccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHH
Confidence 357887652221 2233 778993 69999998822 23456788899999888885555555555432
Q ss_pred ----cCC--CccEEEE-eeeCCH-HHHHHHHHHHHHcCCcEEEEeeC
Q 026729 120 ----TGP--GIRFFQL-YVYKDR-NVVAQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 120 ----~~~--~~~wfQl-Y~~~d~-~~~~~li~rA~~aG~~AlvvTvD 158 (234)
..+ .+.=+-+ |+..+. ....++++.+.+.|++.-.|++-
T Consensus 636 ~~~~~t~~~~~~gvN~~~~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ 682 (2051)
T 2uv8_G 636 SVVSQIEKGSTFGINLIYVNPFMLQWGIPLIKELRSKGYPIQFLTIG 682 (2051)
T ss_dssp HHHHHSCTTCCEEEEEETTCTTHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHHhcCCCCceEEEEeecChhhhhhhHHHHHHHHHcCCCcceEEec
Confidence 122 2323443 222220 11238899999999998444443
No 161
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=27.18 E-value=58 Score=23.25 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.|.++++..-...+.--.|.||.
T Consensus 94 ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~ 131 (160)
T 3f8k_A 94 LVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGFK 131 (160)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCCE
Confidence 45566677777899999999986543344444677774
No 162
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=27.05 E-value=92 Score=27.25 Aligned_cols=86 Identities=17% Similarity=0.093 Sum_probs=50.5
Q ss_pred CcceEecccccccccCchhHHHHHHHHHhcCCc---eEeCCCCCCCHHHHHhcCC--CccEEEEeeeCCHHHHHHHHHHH
Q 026729 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI---MTLSSWSTSSVEEVASTGP--GIRFFQLYVYKDRNVVAQLVRRA 145 (234)
Q Consensus 71 ~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~---~~lSs~ss~sle~ia~~~~--~~~wfQlY~~~d~~~~~~li~rA 145 (234)
..||.|.=|| +|+-+..++++|-++|.- ++-|-... ..+++.+... +....=+ ...|-+..++++++|
T Consensus 122 ~vplsI~DT~-----~~~~~~~V~eaal~aga~~k~iINdvs~~-~~~~~~~~aa~~g~~vv~m-~~~dv~~l~~~~~~a 194 (310)
T 2h9a_B 122 DVPLMIIGCG-----VEEKDAEIFPVIGEALSGRNCLLSSATKD-NYKPIVATCMVHGHSVVAS-APLDINLSKQLNIMI 194 (310)
T ss_dssp SSCEEEECCS-----CHHHHHHHHHHHHHHTTTSCCEEEEECTT-THHHHHHHHHHHTCEEEEE-CSSCHHHHHHHHHHH
T ss_pred CceEEEECCC-----CCCCCHHHHHHHHHhCCCCCCEEEECCCC-ccHHHHHHHHHhCCCEEEE-ChhHHHHHHHHHHHH
Confidence 5566553232 566677788888877763 55443332 4556553211 2112212 123778889999999
Q ss_pred HHcCC--cEEEEeeCCCCCC
Q 026729 146 ERAGF--KAIALTVDTPRLG 163 (234)
Q Consensus 146 ~~aG~--~AlvvTvD~pv~G 163 (234)
+++|+ +-|++.-=.-.+|
T Consensus 195 ~~~Gi~~e~IilDPg~g~~g 214 (310)
T 2h9a_B 195 MEMNLAPNRIIMDPLIGALG 214 (310)
T ss_dssp HTTTCCGGGEEEECCCCCTT
T ss_pred HHCCCChhhEEEeCCCcccc
Confidence 99999 5688765443345
No 163
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=26.74 E-value=61 Score=23.38 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=29.6
Q ss_pred cEE-EEeeeC---CHH----HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 125 RFF-QLYVYK---DRN----VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 125 ~wf-QlY~~~---d~~----~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.++ .+|+.+ .++ +...+++.|++.|++.|.++++.....-+.--.|.||.
T Consensus 96 ~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~ 153 (165)
T 1s3z_A 96 VFLEGIFVLPSFRQRGVAKQLIAAVQRWGTNKGCREMASDTSPENTISQKVHQALGFE 153 (165)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHTTCE
T ss_pred EEEEEEEEChhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcCCHHHHHHHHHcCCe
Confidence 344 566643 334 44555566667899999999986532223333556663
No 164
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=26.62 E-value=2e+02 Score=25.30 Aligned_cols=84 Identities=11% Similarity=0.067 Sum_probs=50.8
Q ss_pred ceEecccccccccCchhHHHHHHHHHhcCCc--eEeCCCC---CCCHHHHHh-----c-CCCccEEEEeeeCCHHHHHHH
Q 026729 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTI--MTLSSWS---TSSVEEVAS-----T-GPGIRFFQLYVYKDRNVVAQL 141 (234)
Q Consensus 73 Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~--~~lSs~s---s~sle~ia~-----~-~~~~~wfQlY~~~d~~~~~~l 141 (234)
|.++.|+.-.+-.+.++=..+++-.-+.|+- ++.+|.+ +.|.||-.+ . ..-+.+...- ..+-..+.++
T Consensus 32 ~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg-~~st~eai~l 110 (344)
T 2hmc_A 32 PALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTG-AVNTASAVAH 110 (344)
T ss_dssp EBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECC-CSSHHHHHHH
T ss_pred EeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 4455666544445666666677766677763 3455533 455555321 1 1234555542 2344667889
Q ss_pred HHHHHHcCCcEEEEee
Q 026729 142 VRRAERAGFKAIALTV 157 (234)
Q Consensus 142 i~rA~~aG~~AlvvTv 157 (234)
.+.|+++|++++++..
T Consensus 111 a~~A~~~Gadavlv~~ 126 (344)
T 2hmc_A 111 AVHAQKVGAKGLMVIP 126 (344)
T ss_dssp HHHHHHHTCSEEEECC
T ss_pred HHHHHhcCCCEEEECC
Confidence 9999999999999884
No 165
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=26.50 E-value=98 Score=28.69 Aligned_cols=75 Identities=12% Similarity=0.104 Sum_probs=42.8
Q ss_pred ccCcceEecccccccccCchhHHHHHHHHHhc---CCceEeCCCCCCCHHHHHh---cCCCccEEEEeeeCCHHHHHHHH
Q 026729 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAA---GTIMTLSSWSTSSVEEVAS---TGPGIRFFQLYVYKDRNVVAQLV 142 (234)
Q Consensus 69 ~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~---gi~~~lSs~ss~sle~ia~---~~~~~~wfQlY~~~d~~~~~~li 142 (234)
.+..|+.|-- ++ ..++++|.++ +.+++-|.. .-.+|++++ ..+.+.-.. ..|-+..++++
T Consensus 153 ~~dvPL~IDS--------~d--pevleaALea~a~~~plI~sat-~dn~e~m~~lAa~y~~pVi~~---~~dl~~lkelv 218 (446)
T 4djd_C 153 ATQLNLVLMA--------DD--PDVLKEALAGVADRKPLLYAAT-GANYEAMTALAKENNCPLAVY---GNGLEELAELV 218 (446)
T ss_dssp TCCSEEEEEC--------SC--HHHHHHHHGGGGGGCCEEEEEC-TTTHHHHHHHHHHTTCCEEEE---CSSHHHHHHHH
T ss_pred hCCCCEEEec--------CC--HHHHHHHHHhhcCcCCeeEecc-hhhHHHHHHHHHHcCCcEEEE---eccHHHHHHHH
Confidence 4567777642 22 2334444332 345555532 346666653 233332222 23778889999
Q ss_pred HHHHHcCCcEEEEee
Q 026729 143 RRAERAGFKAIALTV 157 (234)
Q Consensus 143 ~rA~~aG~~AlvvTv 157 (234)
+++.++|++-|++.-
T Consensus 219 ~~a~~~GI~~IvLDP 233 (446)
T 4djd_C 219 DKIVALGHKQLVLDP 233 (446)
T ss_dssp HHHHHTTCCCEEEEC
T ss_pred HHHHHCCCCcEEECC
Confidence 999999999776653
No 166
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=26.44 E-value=61 Score=30.10 Aligned_cols=75 Identities=16% Similarity=0.109 Sum_probs=47.7
Q ss_pred cCchhHHHHHHHHHhcCCceEeCCCCC-------C---CHHHH-------HhcC--C-CccEEEEeeeCC----------
Q 026729 85 AHPEGEYATARAASAAGTIMTLSSWST-------S---SVEEV-------ASTG--P-GIRFFQLYVYKD---------- 134 (234)
Q Consensus 85 ~~p~gE~a~AraA~~~gi~~~lSs~ss-------~---sle~i-------a~~~--~-~~~wfQlY~~~d---------- 134 (234)
.|++-=.++.++|.+.+.|.++-...+ + +.+++ ++.. | .+..+++=..++
T Consensus 29 ~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~w~~~~~~~ 108 (450)
T 3txv_A 29 AHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNPWKHLPADE 108 (450)
T ss_dssp CCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGGGTTSCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCcccccccHHH
Confidence 477777889999999999999753321 1 12333 2222 2 234677633322
Q ss_pred -HHHHHHHHHHHHHcCCcEEEEeeCC
Q 026729 135 -RNVVAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 135 -~~~~~~li~rA~~aG~~AlvvTvD~ 159 (234)
-+...+++++|.++||+-|.+.--.
T Consensus 109 am~~a~e~i~~aI~AGFtSVMiD~S~ 134 (450)
T 3txv_A 109 AMAKAEAMITAYAKAGFTKLHLDTSM 134 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEECCCB
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 1234799999999999998765443
No 167
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=26.41 E-value=37 Score=25.98 Aligned_cols=47 Identities=23% Similarity=0.277 Sum_probs=30.4
Q ss_pred EEeeeCC---HHHHH----HHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 128 QLYVYKD---RNVVA----QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 128 QlY~~~d---~~~~~----~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.||+.++ +++.. .+++.|++.|++.|.++|.......+.-=.|.||.
T Consensus 117 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~ 170 (199)
T 1u6m_A 117 TISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGFK 170 (199)
T ss_dssp EEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHTTTCE
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCCE
Confidence 7787543 34444 45566667899999999986543333444567774
No 168
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=26.29 E-value=50 Score=23.59 Aligned_cols=47 Identities=13% Similarity=0.255 Sum_probs=30.8
Q ss_pred EEeeeCC---HH----HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 128 QLYVYKD---RN----VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 128 QlY~~~d---~~----~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.+|+.++ ++ +...+++.|.+.|++.|.++++......+.-=.|.||.
T Consensus 79 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF~ 132 (162)
T 3lod_A 79 RVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGYQ 132 (162)
T ss_dssp EEEECTTSCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCCE
Confidence 6666543 33 44555666677899999999987644444455677774
No 169
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=26.27 E-value=87 Score=28.66 Aligned_cols=34 Identities=6% Similarity=0.068 Sum_probs=27.8
Q ss_pred Cc-cEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 123 ~~-~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
-| .+..|-+.-+.+...++.+.++++|+++|+++
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~ 303 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIIS 303 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEe
Confidence 45 58888766566678999999999999999876
No 170
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=25.95 E-value=1.1e+02 Score=26.64 Aligned_cols=21 Identities=29% Similarity=0.385 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 026729 136 NVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~AlvvT 156 (234)
+...+.+++|+++|++-|++.
T Consensus 177 ~~l~~~i~~a~~~Gi~~IilD 197 (294)
T 2dqw_A 177 AFLEAQARRALSAGVPQVVLD 197 (294)
T ss_dssp HHHHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHCCCCcEEEc
Confidence 456788999999999977776
No 171
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=25.88 E-value=89 Score=24.87 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=26.7
Q ss_pred CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCC
Q 026729 122 PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 122 ~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~ 159 (234)
....+++.|...|+++...|++ |.+.|++.=+|+ |.
T Consensus 59 ~~sI~i~~y~~~~~~i~~aL~~-aa~rGV~Vrii~-D~ 94 (196)
T 4ggj_A 59 RSSLELCLFAFSSPQLGRAVQL-LHQRGVRVRVIT-DC 94 (196)
T ss_dssp SSEEEEEESCBCCHHHHHHHHH-HHHTTCEEEEEE-SS
T ss_pred heEEEEEEEEeCCHHHHHHHHH-HHHcCCcEEEEE-ec
Confidence 3456899999999988776665 556799877665 64
No 172
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=25.80 E-value=94 Score=25.20 Aligned_cols=19 Identities=0% Similarity=-0.164 Sum_probs=14.2
Q ss_pred CChHHHHHHHHhCCCcccc
Q 026729 212 LSWKNILCLYQDFSFECDV 230 (234)
Q Consensus 212 ~tW~di~wlr~~w~l~~~~ 230 (234)
++|+-++.+++..++||..
T Consensus 175 ~~~~~i~~l~~~~~iPvia 193 (241)
T 1qo2_A 175 HDFSLTKKIAIEAEVKVLA 193 (241)
T ss_dssp CCHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHhcCCcEEE
Confidence 4688888888887777754
No 173
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=25.67 E-value=2.9e+02 Score=23.96 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=28.2
Q ss_pred HHhcCCCccEEEEeee------CCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 117 VASTGPGIRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 117 ia~~~~~~~wfQlY~~------~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
|.++..-+.++.|-.. .+.+...+++++.+++|++.|-|+.
T Consensus 204 vr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 204 VREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp HHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 3334444667777643 1345678899999999999887763
No 174
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=25.63 E-value=1.2e+02 Score=25.20 Aligned_cols=59 Identities=19% Similarity=0.093 Sum_probs=33.4
Q ss_pred HHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEE
Q 026729 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIA 154 (234)
Q Consensus 90 E~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alv 154 (234)
-.+++..+.+.++|++..+.++..+.+ . .+..|++.. .+......+++-+.+.|.+-+.
T Consensus 85 ~~~~~~~~~~~~ip~i~~~~~~~~~~~---~--~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~ia 143 (368)
T 4eyg_A 85 ALAAAPLATQAKVPEIVMAAGTSIITE---R--SPYIVRTSF-TLAQSSIIIGDWAAKNGIKKVA 143 (368)
T ss_dssp HHHHHHHHHHHTCCEEESSCCCGGGGG---G--CTTEEESSC-CHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhCCceEEeccCCChhhcc---C--CCCEEEecC-ChHHHHHHHHHHHHHcCCCEEE
Confidence 456778889999999987654433321 1 234455432 3334445555555555655443
No 175
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=25.59 E-value=43 Score=27.23 Aligned_cols=38 Identities=29% Similarity=0.510 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP 176 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p 176 (234)
...+.+++.+++|+++|++...+.... -.++|..+.+|
T Consensus 61 ~l~~~~~~L~~~g~d~iviaCnTa~~~--~~~l~~~~~iP 98 (226)
T 2zsk_A 61 ILINAAKALERAGAELIAFAANTPHLV--FDDVQREVNVP 98 (226)
T ss_dssp HHHHHHHHHHHHTCSEEEESSSGGGGG--HHHHHHHCSSC
T ss_pred HHHHHHHHHHHcCCCEEEECCCcHHHH--HHHHHHhCCCC
Confidence 345666777889999999999988644 36777777776
No 176
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=25.52 E-value=33 Score=28.45 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP 176 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p 176 (234)
...+.+++.+++|+++||+...+....- .++|..+.+|
T Consensus 64 ~l~~~~~~L~~~g~~~iviaCNTa~~~~--~~l~~~~~iP 101 (231)
T 3ojc_A 64 LLSNAAISLKHAGAEVIVVCTNTMHKVA--DDIEAACGLP 101 (231)
T ss_dssp HHHHHHHHHHHHTCCEEEECSSGGGGGH--HHHHHHHCSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCchHHHH--HHHHHhCCCC
Confidence 4567777888899999999999875443 6678777776
No 177
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=25.47 E-value=1.4e+02 Score=24.96 Aligned_cols=62 Identities=16% Similarity=0.020 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHH-cCCcEEEEe
Q 026729 89 GEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAER-AGFKAIALT 156 (234)
Q Consensus 89 gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~-aG~~AlvvT 156 (234)
.-.+++..+.+.|+|++..+.++..+.+ +.+..|++.. .|......+++.+.+ .|.+-+.+-
T Consensus 93 ~~~~~~~~~~~~~iP~i~~~~~~~~~~~-----~~~~~f~~~~-~~~~~~~~~~~~l~~~~g~~~iaii 155 (366)
T 3td9_A 93 HSLAIAPIAEENKVPMVTPASTNPLVTQ-----GRKFVSRVCF-IDPFQGAAMAVFAYKNLGAKRVVVF 155 (366)
T ss_dssp HHHHHHHHHHHTTCCEEESSCCCGGGTT-----TCSSEEESSC-CHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred hHHHHHHHHHhCCCeEEecCCCCccccC-----CCCCEEEEeC-CcHHHHHHHHHHHHHhcCCcEEEEE
Confidence 3456788889999999987654433321 2234555432 233344455555533 365554443
No 178
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=25.44 E-value=58 Score=23.49 Aligned_cols=38 Identities=5% Similarity=0.226 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
....+++.|++.|++.|.++|......-+.-=.|.||.
T Consensus 102 ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 139 (169)
T 3g8w_A 102 LINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFE 139 (169)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcCCE
Confidence 33455666777899999999987654444445667774
No 179
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=25.40 E-value=69 Score=23.12 Aligned_cols=38 Identities=16% Similarity=0.032 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|+..|.++|...-...+.-=.|.||.
T Consensus 102 Ll~~~~~~a~~~g~~~i~l~v~~~N~~A~~fY~k~GF~ 139 (150)
T 2dxq_A 102 VVRHAIETAFGANCYKVMLLTGRHDPAVHAFYESCGFV 139 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHcCCc
Confidence 34455566677899999999876432223333556774
No 180
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=25.38 E-value=1.3e+02 Score=25.34 Aligned_cols=62 Identities=11% Similarity=0.076 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEE
Q 026729 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (234)
Q Consensus 90 E~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alvv 155 (234)
-.+++..+.+.|+|++..+.++..+.+ ....+..|++.. .+......+++.+.+.|.+-+.+
T Consensus 86 ~~a~~~~~~~~~ip~i~~~~~~~~~~~---~~~~~~~f~~~~-~~~~~~~~~~~~l~~~g~~~vai 147 (379)
T 3n0w_A 86 ALAINNLVKDKKKLAFITAAAADQIGG---TECNGYGIGFLY-NFTSIVKTVVQAQLAKGYKTWFL 147 (379)
T ss_dssp HHHHHHHHHHHTCEEEECSCCCTTTTT---TTCCSSEEECSC-CHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCceEEEcCCCchhhhc---ccCCCcEEEEeC-ChHHHHHHHHHHHHHcCCcEEEE
Confidence 456788899999999986544433321 111334555532 33334455555555556554443
No 181
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=25.21 E-value=1.1e+02 Score=26.51 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEe
Q 026729 135 RNVVAQLVRRAERAGFK--AIALT 156 (234)
Q Consensus 135 ~~~~~~li~rA~~aG~~--AlvvT 156 (234)
.+...+.+++|+++|++ -|++.
T Consensus 170 ~~~l~~~i~~a~~~Gi~~~~IilD 193 (294)
T 2y5s_A 170 RDFLAARAQALRDAGVAAERICVD 193 (294)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe
Confidence 45667889999999998 78887
No 182
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}
Probab=25.20 E-value=58 Score=23.87 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTL 175 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~ 175 (234)
+...+++.|.+.|++.|.++++..-...+.--.|.||..
T Consensus 121 ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~~ 159 (176)
T 3fyn_A 121 ALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRAGFEE 159 (176)
T ss_dssp HHHHHHHHHHHTTCCCEECCCC--------HHHHTTCCC
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCee
Confidence 455666777788999999999876545555557788854
No 183
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=25.16 E-value=70 Score=22.66 Aligned_cols=38 Identities=11% Similarity=0.126 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
....+++.|.+.|++.|.++++..-...+.-=.|.||.
T Consensus 99 ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF~ 136 (163)
T 3d8p_A 99 LLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGFR 136 (163)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCCE
Confidence 33455566667899999999987543334444667774
No 184
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=24.81 E-value=94 Score=26.14 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=36.2
Q ss_pred HHHHHH--HHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 90 EYATAR--AASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 90 E~a~Ar--aA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
-.+++. .+.+.++|++..+.++..+.+ .+..|++.. .+......+++.+.+.|.+-|.+-
T Consensus 86 ~~~~~~~~~~~~~~iP~v~~~~~~~~~~~------~~~~f~~~~-~~~~~~~~~~~~l~~~g~~~iaii 147 (364)
T 3lop_A 86 VEALMREGVLAEARLPLVGPATGASSMTT------DPLVFPIKA-SYQQEIDKMITALVTIGVTRIGVL 147 (364)
T ss_dssp HHHHHHTTHHHHHTCCEESCSCCCGGGGS------CTTEECCSC-CHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHhhCchhhHHhcCCcEEEcccCcHhhcc------CCcEEEeCC-ChHHHHHHHHHHHHHcCCceEEEE
Confidence 456777 888999999876655444432 234555532 344455666666666776655443
No 185
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=24.74 E-value=75 Score=26.04 Aligned_cols=58 Identities=22% Similarity=0.267 Sum_probs=34.0
Q ss_pred ceEeCCCCCCCHHHHHhcCCCccEEEEeee--CC-----------------HHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 103 IMTLSSWSTSSVEEVASTGPGIRFFQLYVY--KD-----------------RNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 103 ~~~lSs~ss~sle~ia~~~~~~~wfQlY~~--~d-----------------~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
..++||+....++.+.+..|...-.+++.. .+ ...+.+++++++++|.+..+.|||.+
T Consensus 142 ~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~wTvn~~ 218 (247)
T 2otd_A 142 PPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDDWRELTARLGCVSIHLNHKLLDKARVMQLKDAGLRILVYTVNKP 218 (247)
T ss_dssp CCEEEESCHHHHHHHHHHCTTSCEEEEESSCCTTHHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTCEEEEECCCCH
T ss_pred CEEEEcCCHHHHHHHHHHCCCCCEEEEecCCcccHHHHHHHcCCeEEecChHhCCHHHHHHHHHCCCEEEEEccCCH
Confidence 556666666666666654443222223221 11 12346788888888888888888765
No 186
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=24.71 E-value=64 Score=22.83 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.|.++++......+.-=.|.||.
T Consensus 109 ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF~ 146 (164)
T 4e0a_A 109 IFEAIISYGKAHQVDAIELDVYDFNDRAKAFYHSLGMR 146 (164)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCEEEEEEEcCCHHHHHHHHHcCCE
Confidence 45566677777899999999886543333344566663
No 187
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=24.39 E-value=2.5e+02 Score=21.83 Aligned_cols=81 Identities=11% Similarity=-0.011 Sum_probs=46.6
Q ss_pred ccccccCchhHHHHHHHHHhcCCceEeCCCCCC--CHHHHHhcCCCccEEEEeeeC-CH-----------HHHHHHHHHH
Q 026729 80 AMQKMAHPEGEYATARAASAAGTIMTLSSWSTS--SVEEVASTGPGIRFFQLYVYK-DR-----------NVVAQLVRRA 145 (234)
Q Consensus 80 g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~--sle~ia~~~~~~~wfQlY~~~-d~-----------~~~~~li~rA 145 (234)
|+--+.|++-=..+.+.+.+.|+...+.|.++. +.+.+.+-......+++-+.. |. +.+.+.++++
T Consensus 77 GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l 156 (245)
T 3c8f_A 77 GGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYL 156 (245)
T ss_dssp ESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHTCSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHhCCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHH
Confidence 444455765334678888888998888887755 434433211112356665543 32 3455677888
Q ss_pred HHcCCcEEEEeeCCC
Q 026729 146 ERAGFKAIALTVDTP 160 (234)
Q Consensus 146 ~~aG~~AlvvTvD~p 160 (234)
.++|.+..+-++=.|
T Consensus 157 ~~~g~~v~i~~~~~~ 171 (245)
T 3c8f_A 157 ANKNVKVWIRYVVVP 171 (245)
T ss_dssp HHHTCCEEEEEEECT
T ss_pred HhcCCEEEEEEeecC
Confidence 888987544333244
No 188
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=24.36 E-value=1.3e+02 Score=21.36 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.|.++++.. ++.-=.|.||.
T Consensus 117 Ll~~~~~~a~~~g~~~i~l~~~~~---n~~~y~k~GF~ 151 (161)
T 3i3g_A 117 LIMDLCEISRSKGCYKVILDSSEK---SLPFYEKLGFR 151 (161)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTT---THHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCcEEEEEeccc---chhHHHhcCCe
Confidence 445666667778999999999864 34444566663
No 189
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=24.26 E-value=66 Score=22.89 Aligned_cols=50 Identities=12% Similarity=0.047 Sum_probs=31.5
Q ss_pred cEE-EEeeeCC---HH----HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 125 RFF-QLYVYKD---RN----VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 125 ~wf-QlY~~~d---~~----~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.++ .+|+.++ ++ ....+++.|.+.|++.|.++++......+.--.|.||.
T Consensus 89 ~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~ 146 (174)
T 2cy2_A 89 AELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGGV 146 (174)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred eEEEEEEECHHHhCcCHHHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHcCCe
Confidence 344 6666433 33 44555666677899999999987643344444667774
No 190
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=24.19 E-value=1.6e+02 Score=24.83 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHcCCc--EEEEeeC
Q 026729 136 NVVAQLVRRAERAGFK--AIALTVD 158 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~--AlvvTvD 158 (234)
+..++++++|+++|.+ -|++.-=
T Consensus 138 ~~~~~~~~~a~~~Gi~~~~IilDPg 162 (262)
T 1f6y_A 138 AFAMELVAAADEFGLPMEDLYIDPL 162 (262)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred HHHHHHHHHHHHCCCCcccEEEeCC
Confidence 4668899999999997 6776543
No 191
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=24.09 E-value=1.2e+02 Score=27.67 Aligned_cols=68 Identities=21% Similarity=0.319 Sum_probs=42.2
Q ss_pred hhccccccccccC-CCCCCccceeec-CcccCcceEecccccccccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHH
Q 026729 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (234)
Q Consensus 42 af~r~~l~prvL~-dv~~~d~sttl~-G~~~~~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~i 117 (234)
.|+++.|.|..-. +..++|++++|. +..+..|++.+|+.... +-.+|.+-.+.|-.-++. ...+.|++
T Consensus 18 ~~~dvll~p~~s~~~p~~v~~~~eLt~~~~l~iP~is~~m~~v~------~~~lA~al~~~GglG~i~--~~~~~e~~ 87 (494)
T 1vrd_A 18 TFDDVLLVPQYSEVLPKDVKIDTRLTRQIRINIPLVSAAMDTVT------EAALAKALAREGGIGIIH--KNLTPDEQ 87 (494)
T ss_dssp CGGGEEECCCCCCCCGGGSCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHTTTCEEEEC--SSSCHHHH
T ss_pred ccccEEeccccccCCCCceEEEehhhCCCccCceeEecchHHHh------HHHHHHHHHHcCCceEEe--cCCChHHH
Confidence 4788888876422 224678888886 46788899999977421 345566656655443332 34555554
No 192
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=24.00 E-value=1.2e+02 Score=24.49 Aligned_cols=65 Identities=11% Similarity=0.161 Sum_probs=43.8
Q ss_pred CCCCCHHHHHhc-----C--C---CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCC-CCchhhHhhccCCCC
Q 026729 109 WSTSSVEEVAST-----G--P---GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR-LGRREADIKNRFTLP 176 (234)
Q Consensus 109 ~ss~sle~ia~~-----~--~---~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv-~G~Re~d~r~~f~~p 176 (234)
+++.+++||.+. . . ..-+|| ....+...+.|+.|...|+.+||+.-=+-. .+..-+|-=..+..|
T Consensus 31 YG~~Tl~di~~~l~~~a~~~~~g~~l~~~Q---SN~EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~v~~P 106 (176)
T 2c4w_A 31 YGMVTLDQIHEIMQTFVKQGNLDVELEFFQ---TNFEGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIMLAGKP 106 (176)
T ss_dssp GTSCCHHHHHHHHHHHHHHTTCCEEEEEEE---CSCHHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHTSSSC
T ss_pred CCcCCHHHHHHHHHHHhccccCCCEEEEEe---eCcHHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHhCCCC
Confidence 456778887431 1 1 234566 566677788888888777999998765553 666677766666666
No 193
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=23.99 E-value=3.7e+02 Score=23.66 Aligned_cols=21 Identities=19% Similarity=0.343 Sum_probs=16.9
Q ss_pred ceeecCcccCcceEecccccc
Q 026729 62 NTTVLGFKISMPIMIAPTAMQ 82 (234)
Q Consensus 62 sttl~G~~~~~Pi~iaP~g~~ 82 (234)
..+|=|.++.-.|++|||+..
T Consensus 19 P~~ig~~~l~NRiv~aPm~~~ 39 (376)
T 1icp_A 19 PCKMGKFELCHRVVLAPLTRQ 39 (376)
T ss_dssp CEEETTEEESCSEEECCCCCC
T ss_pred CeeECCEEECCccEECCcCcC
Confidence 366767888999999999865
No 194
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=23.97 E-value=1.2e+02 Score=26.05 Aligned_cols=23 Identities=26% Similarity=0.238 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEee
Q 026729 135 RNVVAQLVRRAERAGFK--AIALTV 157 (234)
Q Consensus 135 ~~~~~~li~rA~~aG~~--AlvvTv 157 (234)
.+...+.+++|+++|++ -|++.-
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDP 178 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDP 178 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred HHHHHHHHHHHHHcCCChhhEEEEC
Confidence 45667899999999998 687764
No 195
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=23.95 E-value=54 Score=27.07 Aligned_cols=20 Identities=15% Similarity=0.325 Sum_probs=17.9
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q 026729 138 VAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTv 157 (234)
.++++++|++.|++.|++|=
T Consensus 37 ~ee~v~~A~~~Gl~~i~iTD 56 (255)
T 2anu_A 37 LGEVVDLFGKHGVDVVSITD 56 (255)
T ss_dssp HHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEcC
Confidence 46899999999999999983
No 196
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=23.81 E-value=1.8e+02 Score=26.59 Aligned_cols=75 Identities=17% Similarity=0.092 Sum_probs=49.5
Q ss_pred cCchhHHHHHHHHHhcCCceEeCCCCC--------CC--HHHHHh-------c--CC-CccEEEEeeeCCH---------
Q 026729 85 AHPEGEYATARAASAAGTIMTLSSWST--------SS--VEEVAS-------T--GP-GIRFFQLYVYKDR--------- 135 (234)
Q Consensus 85 ~~p~gE~a~AraA~~~gi~~~lSs~ss--------~s--le~ia~-------~--~~-~~~wfQlY~~~d~--------- 135 (234)
.|++-=.++.++|.+.+.|.++....+ +. ++++.. . .| .+..+.|=...+.
T Consensus 22 ~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~ 101 (420)
T 2fiq_A 22 AHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDA 101 (420)
T ss_dssp CCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhh
Confidence 466666789999999999999854322 12 455432 1 22 1356776444443
Q ss_pred --HHHHHHHHHHHHcCCcEEEEeeCC
Q 026729 136 --NVVAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 136 --~~~~~li~rA~~aG~~AlvvTvD~ 159 (234)
+..++++++|-++||+-|++.--.
T Consensus 102 am~~a~e~i~~aI~aGFtSVMiD~S~ 127 (420)
T 2fiq_A 102 AMEKSVELVKAYVRAGFSKIHLDASM 127 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred hhhhHHHHHHHHHHhCCCEEEECCCC
Confidence 345599999999999998876543
No 197
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=23.69 E-value=30 Score=29.10 Aligned_cols=24 Identities=25% Similarity=0.346 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHcCC--cEEEEeeCCC
Q 026729 137 VVAQLVRRAERAGF--KAIALTVDTP 160 (234)
Q Consensus 137 ~~~~li~rA~~aG~--~AlvvTvD~p 160 (234)
...+++++++++|. +..+.|||.+
T Consensus 210 ~~~~~v~~~~~~Glg~~V~~WTvn~~ 235 (285)
T 1xx1_A 210 LKEAIKSRDSANGFINKIYYWSVDKV 235 (285)
T ss_dssp HHHHHHHHTSTTCCCCEEEEECCCSH
T ss_pred HhHHHHHHHHhcCCCCeEEEeeCCCH
Confidence 45778888888999 9999999875
No 198
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=23.68 E-value=89 Score=25.82 Aligned_cols=67 Identities=21% Similarity=0.100 Sum_probs=37.4
Q ss_pred ccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEE----------EeeeCCHHHHHHHHHHHHHcCCcEE
Q 026729 84 MAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQ----------LYVYKDRNVVAQLVRRAERAGFKAI 153 (234)
Q Consensus 84 l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQ----------lY~~~d~~~~~~li~rA~~aG~~Al 153 (234)
|.+++-=..+|+++.+.|...+. ..+..-+++|++...-|. +- +|..+ ..+-++.+.++|++.|
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~-~~~~~~i~~ir~~v~~Pv-ig~~k~d~~~~~~~I~~----~~~~i~~~~~~Gad~V 105 (232)
T 3igs_A 32 LDKPEIVAAMALAAEQAGAVAVR-IEGIDNLRMTRSLVSVPI-IGIIKRDLDESPVRITP----FLDDVDALAQAGAAII 105 (232)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEE-EESHHHHHHHHTTCCSCE-EEECBCCCSSCCCCBSC----SHHHHHHHHHHTCSEE
T ss_pred CCCcchHHHHHHHHHHCCCeEEE-ECCHHHHHHHHHhcCCCE-EEEEeecCCCcceEeCc----cHHHHHHHHHcCCCEE
Confidence 33343345799999999998544 322223334444443332 31 12222 2345677889999977
Q ss_pred EEe
Q 026729 154 ALT 156 (234)
Q Consensus 154 vvT 156 (234)
++.
T Consensus 106 ~l~ 108 (232)
T 3igs_A 106 AVD 108 (232)
T ss_dssp EEE
T ss_pred EEC
Confidence 654
No 199
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=23.62 E-value=1.4e+02 Score=25.65 Aligned_cols=57 Identities=12% Similarity=0.082 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCCceEeCCCCCCCHH---HHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 91 YATARAASAAGTIMTLSSWSTSSVE---EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 91 ~a~AraA~~~gi~~~lSs~ss~sle---~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
...++.|.+.|...+....+ .+.+ .+.+ .+-+.+..+ .+.+.+++++++|+++|+++
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g-~p~~~i~~l~~-~g~~v~~~v-------~~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAG-NPSKYMERFHE-AGIIVIPVV-------PSVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSS-CGGGTHHHHHH-TTCEEEEEE-------SSHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHCCCCEEEECCC-ChHHHHHHHHH-cCCeEEEEe-------CCHHHHHHHHHcCCCEEEEE
Confidence 35677888899998887665 3333 3333 234456555 13456778899999999984
No 200
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=23.58 E-value=53 Score=26.63 Aligned_cols=24 Identities=25% Similarity=0.311 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
.+.+++++++++|.+..+.|||.+
T Consensus 174 ~~~~~v~~~~~~G~~v~~wtvn~~ 197 (224)
T 1vd6_A 174 VTEEAVAGWRKRGLFVVAWTVNEE 197 (224)
T ss_dssp CCHHHHHHHHHTTCEEEEECCCCH
T ss_pred CCHHHHHHHHHCCCEEEEEeCCCH
Confidence 457899999999999999999864
No 201
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=23.51 E-value=1.4e+02 Score=25.37 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=26.0
Q ss_pred cEEEEeee---CCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 125 RFFQLYVY---KDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 125 ~wfQlY~~---~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
..|=.|+. .|.+.+.++++..+++|++.|=|.+
T Consensus 14 ~ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGi 49 (252)
T 3tha_A 14 NANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGV 49 (252)
T ss_dssp SEEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEEC
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 45666774 5678899999999999999876654
No 202
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=23.31 E-value=75 Score=26.53 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCC
Q 026729 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP 176 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p 176 (234)
.+.++++++.|+++||+...+.. +. .++|..+.+|
T Consensus 59 ~~~~~~l~~~g~d~iviaCnt~~-~l--~~lr~~~~iP 93 (245)
T 3qvl_A 59 LEQIRAGREQGVDGHVIASFGDP-GL--LAARELAQGP 93 (245)
T ss_dssp HHHHHHHHHHTCSEEEEC-CCCT-TH--HHHHHHCSSC
T ss_pred HHHHHHHHHCCCCEEEEeCCChh-HH--HHHHHHcCCC
Confidence 45556778889999999998864 44 6788877776
No 203
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=23.26 E-value=1.4e+02 Score=27.60 Aligned_cols=39 Identities=18% Similarity=0.398 Sum_probs=30.9
Q ss_pred hhccccccccccC---CCCCCccceeecC--------cccCcceEecccc
Q 026729 42 AFSRILFRPRILI---DVSKIDMNTTVLG--------FKISMPIMIAPTA 80 (234)
Q Consensus 42 af~r~~l~prvL~---dv~~~d~sttl~G--------~~~~~Pi~iaP~g 80 (234)
.|+++.|.|..-. ..+++|++|.|-- ..+..|++.+++.
T Consensus 11 t~~d~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~iP~vsa~m~ 60 (503)
T 1me8_A 11 TFNEYLLIPGLSTVDCIPSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQ 60 (503)
T ss_dssp CGGGEEECCCCCCTTCCGGGCBCCEECSCEETTCCCSCEESSSEEECSCT
T ss_pred ccccEEEcCCCCCCccCCCcceeeeeccccccccccceeecCceEeccch
Confidence 4899999998743 2368899987764 7899999999876
No 204
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=23.03 E-value=47 Score=27.02 Aligned_cols=21 Identities=10% Similarity=-0.091 Sum_probs=15.7
Q ss_pred HHHHHHHhcCCceEeCCCCCC
Q 026729 92 ATARAASAAGTIMTLSSWSTS 112 (234)
Q Consensus 92 a~AraA~~~gi~~~lSs~ss~ 112 (234)
.+++.|++.|+++++||-+..
T Consensus 151 ~il~l~k~~g~~ivisSDAh~ 171 (212)
T 1v77_A 151 KAWKLVEKYKVRRFLTSSAQE 171 (212)
T ss_dssp HHHHHHHHHTCCEEEECCCSS
T ss_pred HHHHHHHhcCCCEEEeCCCCC
Confidence 577778888888888877744
No 205
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=22.91 E-value=70 Score=23.50 Aligned_cols=38 Identities=13% Similarity=0.291 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
....+++.|++.|++.|.+.|...-..-+.--.|.||.
T Consensus 103 ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 140 (172)
T 2j8m_A 103 LLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFE 140 (172)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHCCccEEEEEEcCCCHHHHHHHHHCCCE
Confidence 45566667777899999998876433333333567774
No 206
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=22.90 E-value=43 Score=27.75 Aligned_cols=70 Identities=24% Similarity=0.326 Sum_probs=38.5
Q ss_pred HHHHHHHHHhcCC--ceEeCCCCCCCHHHHHhcCCCccEEEEeeeC-------------------CHHHHHHHHHHHHHc
Q 026729 90 EYATARAASAAGT--IMTLSSWSTSSVEEVASTGPGIRFFQLYVYK-------------------DRNVVAQLVRRAERA 148 (234)
Q Consensus 90 E~a~AraA~~~gi--~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~-------------------d~~~~~~li~rA~~a 148 (234)
+..+.+.-.+.|. ..++||+....++.+.+..|...-.+++... -...+.+++++++++
T Consensus 131 ~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~ 210 (252)
T 2pz0_A 131 EEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNIIPELVEGCKKN 210 (252)
T ss_dssp HHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSSTHHHHHHTTCSEEEEBGGGCCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccccHHHHHHHcCCeEEecchhcCCHHHHHHHHHC
Confidence 3445555555553 3677777777777776655543333333211 112235666666666
Q ss_pred CCcEEEEeeCC
Q 026729 149 GFKAIALTVDT 159 (234)
Q Consensus 149 G~~AlvvTvD~ 159 (234)
|.+..+.|||.
T Consensus 211 G~~v~~wTvn~ 221 (252)
T 2pz0_A 211 GVKLFPWTVDR 221 (252)
T ss_dssp TCEECCBCCCS
T ss_pred CCEEEEECCCC
Confidence 66666666654
No 207
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=22.90 E-value=2.1e+02 Score=22.52 Aligned_cols=20 Identities=15% Similarity=0.313 Sum_probs=14.1
Q ss_pred HHHHHHHcCCcEEEEeeCCC
Q 026729 141 LVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 141 li~rA~~aG~~AlvvTvD~p 160 (234)
.++.+.++|++.+.++....
T Consensus 76 ~i~~~~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST 95 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHcCCCEEEEccCcc
Confidence 34677777888888777654
No 208
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=22.70 E-value=1.1e+02 Score=25.60 Aligned_cols=63 Identities=11% Similarity=0.097 Sum_probs=36.4
Q ss_pred HHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEE
Q 026729 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (234)
Q Consensus 90 E~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alvv 155 (234)
-.+++..+.+.|+|++..+.++..++.. ....+..|++.. .|......+++.+.+.|.+-+.+
T Consensus 102 ~~~~~~~~~~~~ip~v~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~l~~~g~~~ia~ 164 (386)
T 3sg0_A 102 SLPLIDIAAEAKTPLMTMAAAAILVAPM--DERRKWVYKVVP-NDDIMAEAIGKYIAKTGAKKVGY 164 (386)
T ss_dssp HHHHHHHHHHTTCCEEECCCCGGGTCSC--CTTGGGEEECSC-CHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCeEEEecCCCcccccc--CCCCCcEEecCC-CcHHHHHHHHHHHHhcCCCEEEE
Confidence 3467788889999998876543222210 112344566543 34455566667676677665544
No 209
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=22.66 E-value=1.5e+02 Score=22.55 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=28.5
Q ss_pred CCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCC
Q 026729 122 PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 122 ~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~ 159 (234)
++...+=+-..+.-..+.+.++.|++.|++.|.||-..
T Consensus 96 ~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~ 133 (183)
T 2xhz_A 96 PQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRP 133 (183)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCT
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34445555555666678899999999999999999753
No 210
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=22.66 E-value=45 Score=27.43 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeeCCC
Q 026729 134 DRNVVAQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 134 d~~~~~~li~rA~~aG~~AlvvTvD~p 160 (234)
+.+.+.+++++|.+.|++.|++|==.+
T Consensus 22 ~~e~~~e~i~~A~~~Gi~~i~~TdH~~ 48 (247)
T 2wje_A 22 SREESKALLAESYRQGVRTIVSTSHRR 48 (247)
T ss_dssp SHHHHHHHHHHHHHTTEEEEECCCEEB
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 345667899999999999999985433
No 211
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=22.54 E-value=1.1e+02 Score=27.62 Aligned_cols=42 Identities=14% Similarity=0.065 Sum_probs=32.7
Q ss_pred CchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEE
Q 026729 86 HPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQL 129 (234)
Q Consensus 86 ~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQl 129 (234)
..++-..+.+.|.+.|++++.+-+...+++-+.+- +...+|+
T Consensus 99 ~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~--~vd~~KI 140 (385)
T 1vli_A 99 PAEWILPLLDYCREKQVIFLSTVCDEGSADLLQST--SPSAFKI 140 (385)
T ss_dssp CGGGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTT--CCSCEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhc--CCCEEEE
Confidence 45788899999999999999998888888777543 1235565
No 212
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=22.51 E-value=74 Score=22.48 Aligned_cols=47 Identities=11% Similarity=0.019 Sum_probs=29.2
Q ss_pred EEeeeCC---HHHHH----HHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 128 QLYVYKD---RNVVA----QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 128 QlY~~~d---~~~~~----~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
-+|+.++ +++.. .+++.|++.|++.+.++++......+.--.|.||.
T Consensus 73 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf~ 126 (157)
T 1mk4_A 73 FSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGFD 126 (157)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTCE
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCCE
Confidence 5666543 34444 45556667899999999887543333344567774
No 213
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1
Probab=22.38 E-value=64 Score=23.06 Aligned_cols=46 Identities=17% Similarity=0.083 Sum_probs=26.1
Q ss_pred EEeeeCC---HHH----HHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccC
Q 026729 128 QLYVYKD---RNV----VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRF 173 (234)
Q Consensus 128 QlY~~~d---~~~----~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f 173 (234)
.+|+.++ +++ ...+++.|++.|++.|.++++..-...+.--.|.||
T Consensus 110 ~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF 162 (168)
T 1bo4_A 110 DLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGI 162 (168)
T ss_dssp EEEECTTSTTSSHHHHHHHHHHHHHHHHTCCEEEEECCCSCCSSEEEEEEC--
T ss_pred EEEECHHHhcCCHHHHHHHHHHHHHHhCCCCEEEEEecCCChHHHHHHHHcCC
Confidence 5666543 334 445556666789999999988653332222234444
No 214
>1gz0_A Hypothetical tRNA/RRNA methyltransferase YJFH; 2'O-methyltransferase, knot, montreal- kingston bacterial structural genomics initiative, BSGI; 2.5A {Escherichia coli} SCOP: c.116.1.1 d.79.3.3
Probab=22.36 E-value=2.4e+02 Score=23.51 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=40.1
Q ss_pred CCceEeCCCCC---CCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCC
Q 026729 101 GTIMTLSSWST---SSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (234)
Q Consensus 101 gi~~~lSs~ss---~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~ 159 (234)
|+...+..... .+++++......+.++=|.-..|+.-+-.++|-|...|+++++++-+.
T Consensus 79 Gv~a~~~~~~~~~~~~l~~~~~~~~~~~~lvLd~v~dp~NlGaI~Rta~a~G~~~vil~~~~ 140 (253)
T 1gz0_A 79 GIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDR 140 (253)
T ss_dssp TEEEEECCCCCCCGGGHHHHHHTCSSCEEEEEESCCCHHHHHHHHHHHHHHTCSEEEEESSS
T ss_pred EEEEEEeccccCcHHHHHHHHhccCCCEEEEEeCCCCcCcHHHHHHHHHHhCCCEEEEeCCC
Confidence 55555554333 245555432223456666667899999999999999999999996553
No 215
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=22.35 E-value=1.8e+02 Score=24.39 Aligned_cols=64 Identities=5% Similarity=-0.076 Sum_probs=36.0
Q ss_pred hHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEe
Q 026729 89 GEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 89 gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvT 156 (234)
.-.+++..+.+.++|++..+.++..+.+ ....+..|++.. .+......+++.+.+.|.+-+.+-
T Consensus 83 ~~~a~~~~~~~~~ip~i~~~~~~~~~~~---~~~~~~~f~~~~-~~~~~~~~~~~~l~~~g~~~vaii 146 (375)
T 3i09_A 83 TALSMNQVAAEKKKVYINIGAGADTLTN---EQCTPYTVHYAY-DTMALAKGTGSAVVKQGGKTWFFL 146 (375)
T ss_dssp HHHHHHHHHHHHTCEEEECSCCCGGGGT---TTCCTTEEECSC-CHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCceEEEeCCCchhhhc---ccCCCcEEEeeC-ChHHHHHHHHHHHHHcCCceEEEE
Confidence 3456788899999999987554443321 111334555432 333444555555555666654443
No 216
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=22.25 E-value=76 Score=22.53 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.|++.|.++++......+.--.|.||.
T Consensus 103 ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~ 140 (174)
T 3dr6_A 103 LLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFT 140 (174)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCCCE
Confidence 45566677777899999999887644334445667774
No 217
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=22.22 E-value=4.2e+02 Score=23.61 Aligned_cols=20 Identities=25% Similarity=0.285 Sum_probs=16.2
Q ss_pred HHHHHHHHHcCCcEEEEeeC
Q 026729 139 AQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTvD 158 (234)
.+-.+||+++||++|=|+.=
T Consensus 174 ~~AA~~a~~AGfDgVEIh~a 193 (402)
T 2hsa_B 174 RRSALNAIEAGFDGIEIHGA 193 (402)
T ss_dssp HHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECCc
Confidence 45567888999999999885
No 218
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=22.17 E-value=88 Score=27.99 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=33.2
Q ss_pred CchhHHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEE
Q 026729 86 HPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQL 129 (234)
Q Consensus 86 ~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQl 129 (234)
..++-..+.++|.+.|++++.+-+...+++-+.+- +...+|+
T Consensus 76 ~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~--~v~~~KI 117 (350)
T 3g8r_A 76 QPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAH--GIEIIKI 117 (350)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHT--TCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHc--CCCEEEE
Confidence 45777889999999999999998888888877653 2346676
No 219
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Probab=21.99 E-value=75 Score=22.80 Aligned_cols=48 Identities=21% Similarity=0.155 Sum_probs=29.7
Q ss_pred EEEeeeCC---HHHH----HHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 127 FQLYVYKD---RNVV----AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 127 fQlY~~~d---~~~~----~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
..+|+.++ +++. ..+++.|.+.|++.|.++++..-..-+.--.|.||.
T Consensus 101 ~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~~~~~n~~a~~~y~k~Gf~ 155 (172)
T 2r1i_A 101 DELYVRPGRRGHRLGSALLAASCGLVRSRGGALLEINVDGEDTDARRFYEARGFT 155 (172)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTCB
T ss_pred EEEEECcccccCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHHHHHHCCCE
Confidence 45666554 3344 445556667899999999986533333344667774
No 220
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=21.83 E-value=1.3e+02 Score=25.55 Aligned_cols=22 Identities=18% Similarity=0.015 Sum_probs=16.5
Q ss_pred HHHHHHHHHhcCCceEeCCCCC
Q 026729 90 EYATARAASAAGTIMTLSSWST 111 (234)
Q Consensus 90 E~a~AraA~~~gi~~~lSs~ss 111 (234)
-.+++..+.+.++|++..+.++
T Consensus 86 ~~a~~~~~~~~~ip~i~~~~~~ 107 (387)
T 3i45_A 86 GLAVSDFARQRKVLFMASEPLT 107 (387)
T ss_dssp HHHHHHHHHHHTCCEEECSCCC
T ss_pred HHHHHHHHHHcCceEEecCCCc
Confidence 3467888999999999865443
No 221
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}
Probab=21.80 E-value=1.1e+02 Score=21.31 Aligned_cols=38 Identities=5% Similarity=0.099 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHcC-CcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAG-FKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG-~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
+...+++.|++.| ++.+.++++......+.-=.|.||.
T Consensus 105 ll~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~Gf~ 143 (157)
T 3dsb_A 105 LFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNMY 143 (157)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTTTCE
T ss_pred HHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHCCCE
Confidence 4556667777889 9999999988765555555677774
No 222
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=21.62 E-value=2.1e+02 Score=23.18 Aligned_cols=22 Identities=18% Similarity=0.454 Sum_probs=18.8
Q ss_pred HHHHHHHHHcCCcEEEEeeCCC
Q 026729 139 AQLVRRAERAGFKAIALTVDTP 160 (234)
Q Consensus 139 ~~li~rA~~aG~~AlvvTvD~p 160 (234)
.+++++++++|.+..+.|||.+
T Consensus 188 ~~~v~~~~~~G~~v~~wTvn~~ 209 (234)
T 1o1z_A 188 VEVLRSFRKKGIVIFVWTLNDP 209 (234)
T ss_dssp HHHHHHHHHTTCEEEEESCCCH
T ss_pred HHHHHHHHHcCCEEEEeCCCCH
Confidence 7888899999999999998764
No 223
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=21.50 E-value=76 Score=23.04 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
....+++.|.+.|++.|.++++..-...+.--.|.||.
T Consensus 84 ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 121 (160)
T 2cnt_A 84 LLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFN 121 (160)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCCE
Confidence 44555666777899999999886543334444567774
No 224
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=21.44 E-value=55 Score=26.59 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCC
Q 026729 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP 176 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p 176 (234)
....+.+++.+++|+++|++...+... =...+|..+.+|
T Consensus 61 ~~l~~~~~~l~~~g~d~iviaCnTa~~--~~~~l~~~~~iP 99 (228)
T 1jfl_A 61 PQLIWTAKRLEECGADFIIMPCNTAHA--FVEDIRKAIKIP 99 (228)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTGGGG--GHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccHHH--HHHHHHHhCCCC
Confidence 456688888899999999999998753 366777777776
No 225
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=21.43 E-value=52 Score=22.97 Aligned_cols=50 Identities=14% Similarity=0.273 Sum_probs=30.4
Q ss_pred cEE-EEeeeCC---HHH----HHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 125 RFF-QLYVYKD---RNV----VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 125 ~wf-QlY~~~d---~~~----~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.++ .+|+.++ +++ ...+++.|++.|++.|.++++.....-+.-=.|.||.
T Consensus 84 ~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~ 141 (152)
T 1qsm_A 84 IYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDESNHRAQLLYVKVGYK 141 (152)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCHHHHHHHHHHEEE
T ss_pred eEEEEEEechhcccCCHHHHHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHcCCC
Confidence 445 6666443 334 4455566667899999999886543333334566664
No 226
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=21.31 E-value=1e+02 Score=24.51 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=27.6
Q ss_pred CccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeCCCC
Q 026729 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (234)
Q Consensus 123 ~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD~pv 161 (234)
....+++|...|+.+...|++. .+-|++.=+|+ |...
T Consensus 72 ~sI~i~~Y~~~~~~I~~aL~~A-a~RGV~VRii~-D~~~ 108 (220)
T 4gel_A 72 YSIDLAIYTFTSLFLADSIKRA-LQRGVIIRIIS-DGEM 108 (220)
T ss_dssp SEEEEECSCBCCHHHHHHHHHH-HHHTCEEEEEC-CTTT
T ss_pred hEEEEEEEEeCCHHHHHHHHHH-HHcCCeEEEEE-echh
Confidence 3468899999999988777655 46699887775 6543
No 227
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=21.00 E-value=1.1e+02 Score=28.21 Aligned_cols=36 Identities=6% Similarity=0.044 Sum_probs=28.0
Q ss_pred Cc-cEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeC
Q 026729 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 123 ~~-~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD 158 (234)
-| .+..+-+.-+.+...++.+.++++|+++|+++-=
T Consensus 297 ~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~nt 333 (443)
T 1tv5_A 297 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNT 333 (443)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECC
Confidence 45 6888765445556788999999999999999743
No 228
>2ha8_A TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens}
Probab=20.90 E-value=1.2e+02 Score=23.95 Aligned_cols=77 Identities=10% Similarity=0.164 Sum_probs=45.3
Q ss_pred cccccCchhHHHHHHHHHhcCCceEe-CCCCCCCHHHHHh-cCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEEeeC
Q 026729 81 MQKMAHPEGEYATARAASAAGTIMTL-SSWSTSSVEEVAS-TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 81 ~~~l~~p~gE~a~AraA~~~gi~~~l-Ss~ss~sle~ia~-~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~AlvvTvD 158 (234)
+.++-+|.-=-+++|.|..+|+--++ +.....+.+.+.. +.+...|+.++.. ...-..+.++..++.|+..+..+.+
T Consensus 31 Ld~i~dp~NlGaI~Rta~a~G~~~vil~~~~~~~~k~~~r~s~ga~~~l~~~~~-~~~~~~~~l~~lk~~g~~i~~~~~~ 109 (184)
T 2ha8_A 31 ASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSAEQWLPLVEV-KPPQLIDYLQQKKTEGYTIIGVEQT 109 (184)
T ss_dssp CTTCCCHHHHHHHHHHHHHTTCSEEEESCGGGGGSHHHHHHHTTGGGTSCEEEC-CGGGHHHHHHHHHHTTCEEEEECCC
T ss_pred EcCCCCCCcHHHHHHHHHHhCCCEEEECCCCCCCcccceeecCCccceEEEEEE-cCCCHHHHHHHHHHCCCEEEEEECC
Confidence 34455553334699999999997554 3322233444533 3444456665533 1123457788888899987776654
No 229
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=20.76 E-value=1.3e+02 Score=26.16 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=39.9
Q ss_pred HHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeee-------CCHHHHHHHHHHHHHcCCcEEEEee
Q 026729 94 ARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTV 157 (234)
Q Consensus 94 AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~-------~d~~~~~~li~rA~~aG~~AlvvTv 157 (234)
...-.++|..|.-.+.......++.+.. +..++-+++. -|.+...+++++|+++|.+.++ ++
T Consensus 12 ~~~~e~~g~~~~~~~G~~~~~~~ilk~~-G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~l-d~ 80 (334)
T 1fob_A 12 LLLLEDEGYSYKNLNGQTQALETILADA-GINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYL-DL 80 (334)
T ss_dssp HHHHHHTTCCCBCTTSCBCCHHHHHHHH-TCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEE-EE
T ss_pred HHHHHHcCCEEECCCCCCchHHHHHHHc-CCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEE-Ee
Confidence 3445667777754444445555665443 3456666644 4567888999999999997544 54
No 230
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=20.67 E-value=84 Score=22.37 Aligned_cols=47 Identities=15% Similarity=0.104 Sum_probs=28.0
Q ss_pred EEeeeCC---HHH----HHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 128 QLYVYKD---RNV----VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 128 QlY~~~d---~~~----~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.+|+.++ +++ ...+++.+++.|++.|.++|...-..-+.-=.|.||.
T Consensus 74 ~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~a~~~Y~k~GF~ 127 (144)
T 2pdo_A 74 YLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYE 127 (144)
T ss_dssp EEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEESSCHHHHHHHHHTTCE
T ss_pred EEEECccccCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCCCHHHHHHHHHcCCc
Confidence 5666443 334 4455556667899999998875432222333567774
No 231
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=20.65 E-value=48 Score=28.24 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCC
Q 026729 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP 176 (234)
Q Consensus 136 ~~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p 176 (234)
....+.+++.+++|+++||+..++... =-.++|..+.+|
T Consensus 86 ~~l~~~~~~L~~~Gad~IVIaCNTah~--~l~~lr~~~~iP 124 (268)
T 3s81_A 86 RYLERYLHMLEDAGAECIVIPCNTAHY--WFDDLQNVAKAR 124 (268)
T ss_dssp HHHHHHHHHHHHTTCSEEECSCSGGGG--GHHHHHHHCSSE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCHHH--HHHHHHHHCCCC
Confidence 456778889999999999999998765 256788877776
No 232
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=20.55 E-value=75 Score=26.25 Aligned_cols=65 Identities=25% Similarity=0.172 Sum_probs=38.3
Q ss_pred ccCchhHHHHHHHHHhcCCceEeCCCCCCCHHHHH---hcCCCccE---EEE------eeeCCHHHHHHHHHHHHHcCCc
Q 026729 84 MAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA---STGPGIRF---FQL------YVYKDRNVVAQLVRRAERAGFK 151 (234)
Q Consensus 84 l~~p~gE~a~AraA~~~gi~~~lSs~ss~sle~ia---~~~~~~~w---fQl------Y~~~d~~~~~~li~rA~~aG~~ 151 (234)
|-+++-=..+|+++.+.|...+-. .++++|. +...-|.. -+. |... +.+-++.+.++|++
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~----~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~----~~~~i~~~~~aGad 103 (229)
T 3q58_A 32 MDKPEIVAAMAQAAASAGAVAVRI----EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITP----YLQDVDALAQAGAD 103 (229)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEE----ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC----SHHHHHHHHHHTCS
T ss_pred CCCcchHHHHHHHHHHCCCcEEEE----CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCc----cHHHHHHHHHcCCC
Confidence 433443457999999999987653 2456654 44433322 221 2222 23446778899999
Q ss_pred EEEEe
Q 026729 152 AIALT 156 (234)
Q Consensus 152 AlvvT 156 (234)
.|++.
T Consensus 104 ~I~l~ 108 (229)
T 3q58_A 104 IIAFD 108 (229)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 77653
No 233
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=20.47 E-value=1.6e+02 Score=24.42 Aligned_cols=64 Identities=9% Similarity=0.011 Sum_probs=38.4
Q ss_pred HHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHc-CCcEEEEeeC
Q 026729 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERA-GFKAIALTVD 158 (234)
Q Consensus 90 E~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~a-G~~AlvvTvD 158 (234)
-.+++..+.+.|+|++..+.++..+.+ . ..+..|++.. .|......+++.+.+. |.+-+.+-.+
T Consensus 82 ~~~~~~~~~~~~ip~v~~~~~~~~~~~---~-~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~iaii~~ 146 (356)
T 3ipc_A 82 SIPASEVYAENGILEITPAATNPVFTE---R-GLWNTFRTCG-RDDQQGGIAGKYLADHFKDAKVAIIHD 146 (356)
T ss_dssp HHHHHHHHHTTTCEEEESSCCCGGGGS---S-CCTTEEESSC-CHHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred HHHHHHHHHhCCCeEEecCCCCcHhhc---C-CCCcEEEecC-ChHHHHHHHHHHHHHhcCCCEEEEEeC
Confidence 456778889999999886655444432 1 2245677643 4445556666655544 7766554433
No 234
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=20.47 E-value=1.9e+02 Score=23.90 Aligned_cols=60 Identities=10% Similarity=-0.013 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCceEeCCCCCCCHHHHHhcCCCccEEEEeeeCCHHHHHHHHHHHHHcCCcEEEE
Q 026729 90 EYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (234)
Q Consensus 90 E~a~AraA~~~gi~~~lSs~ss~sle~ia~~~~~~~wfQlY~~~d~~~~~~li~rA~~aG~~Alvv 155 (234)
..+++..+.+.++|++..+.++..+. .. ++..|++. ..|......+++.+.+.|.+-|.+
T Consensus 85 ~~~~~~~~~~~~iP~v~~~~~~~~~~---~~--~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~ia~ 144 (358)
T 3hut_A 85 SMAAGSIYGKEGMPQLSPTAAHPDYI---KI--SPWQFRAI-TTPAFEGPNNAAWMIGDGFTSVAV 144 (358)
T ss_dssp HHHHHHHHHHHTCCEEESSCCCGGGT---TS--CTTEEESS-CCGGGHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCcEEecCCCCcccc---cC--CCeEEEec-CChHHHHHHHHHHHHHcCCCEEEE
Confidence 45677888899999998654432221 11 13445543 233444455555555456554443
No 235
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=20.45 E-value=1.1e+02 Score=24.46 Aligned_cols=34 Identities=21% Similarity=0.457 Sum_probs=24.8
Q ss_pred HHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCCCC
Q 026729 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLP 176 (234)
Q Consensus 140 ~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~~p 176 (234)
+.+++.+++|+++|++...+. .+ ...+|..+.+|
T Consensus 66 ~~~~~l~~~g~d~iviaCnta-~~--~~~l~~~~~iP 99 (228)
T 2eq5_A 66 RLAKEFEREGVDAIIISCAAD-PA--VEKVRKLLSIP 99 (228)
T ss_dssp HHHHHHHHTTCSEEEECSTTC-TT--HHHHHHHCSSC
T ss_pred HHHHHHHHCCCCEEEEeCCch-HH--HHHHHHhCCCC
Confidence 345566789999999999887 44 45666666666
No 236
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=20.31 E-value=2.1e+02 Score=23.02 Aligned_cols=19 Identities=32% Similarity=0.379 Sum_probs=16.7
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 026729 138 VAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvT 156 (234)
..+.+++++++|+..|++|
T Consensus 153 ~~e~~~~~~~~G~~~i~~~ 171 (253)
T 1thf_D 153 LRDWVVEVEKRGAGEILLT 171 (253)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 5688899999999999997
No 237
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=20.26 E-value=63 Score=30.42 Aligned_cols=32 Identities=28% Similarity=0.319 Sum_probs=24.7
Q ss_pred cEEEEeeeCCHH----HHHHHHHHHHHcCCcEEEEe
Q 026729 125 RFFQLYVYKDRN----VVAQLVRRAERAGFKAIALT 156 (234)
Q Consensus 125 ~wfQlY~~~d~~----~~~~li~rA~~aG~~AlvvT 156 (234)
.|+|++..+=++ ...+++++++++|+..|++|
T Consensus 437 ~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t 472 (555)
T 1jvn_A 437 CWYQCTIKGGRESRDLGVWELTRACEALGAGEILLN 472 (555)
T ss_dssp EEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEEC
T ss_pred eeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEe
Confidence 489998754322 24689999999999999985
No 238
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=20.25 E-value=57 Score=27.76 Aligned_cols=28 Identities=21% Similarity=0.138 Sum_probs=22.2
Q ss_pred HHHHHHHHHHcCCcEEEEeeCCCCCCch
Q 026729 138 VAQLVRRAERAGFKAIALTVDTPRLGRR 165 (234)
Q Consensus 138 ~~~li~rA~~aG~~AlvvTvD~pv~G~R 165 (234)
..+++++|++.|+++|++|==..+.|..
T Consensus 19 ~~elv~~A~~~Gl~~iaiTDH~~~~g~~ 46 (292)
T 2yb1_A 19 PTEVIDRAAARAPALLALTDHDCTGGLA 46 (292)
T ss_dssp HHHHHHHHHTTCCSEEEECCBTCCTTHH
T ss_pred HHHHHHHHHHCCCCEEEEecCCccccHH
Confidence 4679999999999999999554555654
No 239
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Probab=20.23 E-value=78 Score=22.74 Aligned_cols=37 Identities=11% Similarity=0.001 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRF 173 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f 173 (234)
....+++.|.+.|++.|.++++.....-+.--.|.||
T Consensus 109 ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~Gf 145 (171)
T 2b5g_A 109 ILKNLSQVAMRCRCSSMHFLVAEWNEPSINFYKRRGA 145 (171)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEETTCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHCCCCEEEEEEcccCHHHHHHHHHcCC
Confidence 3445556667789999999998654333333345666
No 240
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=20.17 E-value=86 Score=23.24 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=28.0
Q ss_pred EEeeeCC---HHH----HHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 128 QLYVYKD---RNV----VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 128 QlY~~~d---~~~----~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
.||+.++ +++ ...+++.|++.|++.|.++|...-..-+.-=.|.||.
T Consensus 93 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF~ 146 (170)
T 2bei_A 93 DIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNQRAMDLYKALGAQ 146 (170)
T ss_dssp EEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTCE
T ss_pred EEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeccCHHHHHHHHHCCCE
Confidence 4777543 344 4455566677899999999876432222223456663
No 241
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=20.11 E-value=3.3e+02 Score=21.59 Aligned_cols=80 Identities=15% Similarity=0.098 Sum_probs=45.8
Q ss_pred cceEecccccccccCchhHHHHHHHHHhcCCceE-e--------CCCCCCCHHHHH---hcCCCccEEEEeeeCCHHHHH
Q 026729 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-L--------SSWSTSSVEEVA---STGPGIRFFQLYVYKDRNVVA 139 (234)
Q Consensus 72 ~Pi~iaP~g~~~l~~p~gE~a~AraA~~~gi~~~-l--------Ss~ss~sle~ia---~~~~~~~wfQlY~~~d~~~~~ 139 (234)
.|+.++|.=... +++--...++++.+.|+-++ + .+ .+..++.+. +..+.+...-+|+. | ..
T Consensus 9 ~~~~i~p~i~a~--d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~-~~~~~~~i~~l~~~~~~~~~v~l~vn-d---~~ 81 (230)
T 1rpx_A 9 SDIIVSPSILSA--NFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN-ITIGPLVVDSLRPITDLPLDVHLMIV-E---PD 81 (230)
T ss_dssp TSCEEEEBGGGS--CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC-BCCCHHHHHHHGGGCCSCEEEEEESS-S---HH
T ss_pred CceEEEEEeecC--CHHHHHHHHHHHHHCCCCEEEEeeccCCcccc-cccCHHHHHHHHhccCCcEEEEEEec-C---HH
Confidence 455566643332 23333445667777675422 2 11 223454443 33333556677764 3 34
Q ss_pred HHHHHHHHcCCcEEEEeeC
Q 026729 140 QLVRRAERAGFKAIALTVD 158 (234)
Q Consensus 140 ~li~rA~~aG~~AlvvTvD 158 (234)
+.++.+.++|++.|.++.+
T Consensus 82 ~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHcCCCEEEEEec
Confidence 6788888999999999988
No 242
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1
Probab=20.08 E-value=77 Score=23.08 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCCcEEEEeeCCCCCCchhhHhhccCC
Q 026729 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFT 174 (234)
Q Consensus 137 ~~~~li~rA~~aG~~AlvvTvD~pv~G~Re~d~r~~f~ 174 (234)
....+++.|.+.|++.|.++|+.--..-+.--.|.||.
T Consensus 106 ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF~ 143 (170)
T 2ge3_A 106 LMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFA 143 (170)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHCCceEEEEEEEcCCHHHHHHHHHCCCE
Confidence 44556666777899999999987543333334567774
Done!