Your job contains 1 sequence.
>026730
MISKSFKLETGVSFVKLSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRA
GVAEWKITNPVHIVCYYRYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYT
LSEEKVEAAVLYPGLRPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDIL
GVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026730
(234 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036932 - symbol:FBP7 "AT1G21760" species:3702... 953 7.6e-96 1
MGI|MGI:1918788 - symbol:Fbxo9 "f-box protein 9" species:... 193 1.4e-14 1
UNIPROTKB|Q3ZBT2 - symbol:FBXO9 "F-box only protein 9" sp... 191 2.3e-14 1
UNIPROTKB|Q9UK97 - symbol:FBXO9 "F-box only protein 9" sp... 191 2.4e-14 1
RGD|1310374 - symbol:Fbxo9 "f-box protein 9" species:1011... 189 3.7e-14 1
UNIPROTKB|F6Y9J3 - symbol:fbxo9 "F-box only protein 9" sp... 185 9.9e-14 1
ZFIN|ZDB-GENE-030131-4194 - symbol:fbxo9 "F-box protein 9... 174 1.5e-12 1
POMBASE|SPCC1827.08c - symbol:pof7 "F-box protein Pof7" s... 167 4.2e-11 1
ASPGD|ASPL0000006907 - symbol:fbx1 species:162425 "Emeric... 142 2.8e-07 1
SGD|S000004087 - symbol:HRT3 "Putative SCF-ubiquitin liga... 118 9.4e-05 1
>TAIR|locus:2036932 [details] [associations]
symbol:FBP7 "AT1G21760" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006417 "regulation
of translation" evidence=IMP] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009409 "response to cold" evidence=IMP]
[GO:0090406 "pollen tube" evidence=IDA] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634
GO:GO:0006417 GO:GO:0009409 SUPFAM:SSF81383 GO:GO:0009408
GO:GO:0016567 eggNOG:NOG264152 KO:K10295 GO:GO:0090406
EMBL:AC007727 EMBL:BT006427 EMBL:AK228033 IPI:IPI00518971
PIR:C86351 RefSeq:NP_564150.1 UniGene:At.43381 UniGene:At.71064
UniGene:At.71563 ProteinModelPortal:Q9XI00 SMR:Q9XI00 IntAct:Q9XI00
STRING:Q9XI00 PRIDE:Q9XI00 EnsemblPlants:AT1G21760.1 GeneID:838780
KEGG:ath:AT1G21760 TAIR:At1g21760 HOGENOM:HOG000012467
InParanoid:Q9XI00 OMA:FVFVPFE PhylomeDB:Q9XI00
ProtClustDB:CLSN2687901 Genevestigator:Q9XI00 Uniprot:Q9XI00
Length = 328
Score = 953 (340.5 bits), Expect = 7.6e-96, P = 7.6e-96
Identities = 173/219 (78%), Positives = 201/219 (91%)
Query: 18 SGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYY 77
+GV+ENYKILQS+Y+GSWRKMWLLR R+R DGLYVSRNTYIRAG+AEWKITNPVHIVCYY
Sbjct: 110 AGVIENYKILQSKYDGSWRKMWLLRSRVRTDGLYVSRNTYIRAGIAEWKITNPVHIVCYY 169
Query: 78 RYMRFFPSGRFIYKNSSQKIKDVAKIMNFRAAKADCVFTGHYTLS--EEKVEAAVLYPGL 135
RY+RF+PSGRF+YKNSSQK+KDVAK MNF+A+K++ ++ G YTLS ++K+EAAVLYPG
Sbjct: 170 RYIRFYPSGRFLYKNSSQKLKDVAKYMNFKASKSENLYKGTYTLSMSDDKIEAAVLYPGT 229
Query: 136 RPTVLRIRLRLRGTTAGANNRMDLLSLVTSGMNDNEVNGHDEDILGVVEGWQDDETHNPD 195
RPTVLRIRLRLRGT GANNRMDLLSLVTSG+ND E++ +EDILG+VEGW+DDETHNPD
Sbjct: 230 RPTVLRIRLRLRGTAIGANNRMDLLSLVTSGVNDEEISSTEEDILGLVEGWEDDETHNPD 289
Query: 196 VPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYYVPG 234
+PAVSHKRG+T FVFVPFEEV+ SVLNLP EKMDYYV G
Sbjct: 290 IPAVSHKRGMTAFVFVPFEEVDESVLNLPPEKMDYYVTG 328
>MGI|MGI:1918788 [details] [associations]
symbol:Fbxo9 "f-box protein 9" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032006 "regulation of TOR signaling cascade" evidence=ISO]
InterPro:IPR001810 PROSITE:PS50005 PROSITE:PS50181 PROSITE:PS50293
UniPathway:UPA00143 MGI:MGI:1918788 SUPFAM:SSF81383 CTD:26268
eggNOG:NOG264152 HOGENOM:HOG000047162 HOVERGEN:HBG001041 KO:K10295
OrthoDB:EOG46T31G GeneTree:ENSGT00390000014256 OMA:LVWIHHS
EMBL:AB041585 EMBL:AK077607 EMBL:AK018482 EMBL:BC020074
IPI:IPI00311910 IPI:IPI00474493 IPI:IPI00553759
RefSeq:NP_001074959.1 RefSeq:NP_076094.2 UniGene:Mm.28584
ProteinModelPortal:Q8BK06 SMR:Q8BK06 STRING:Q8BK06
PhosphoSite:Q8BK06 PRIDE:Q8BK06 DNASU:71538
Ensembl:ENSMUST00000001402 Ensembl:ENSMUST00000085311
Ensembl:ENSMUST00000159099 GeneID:71538 KEGG:mmu:71538
UCSC:uc009qtp.1 UCSC:uc009qtq.1 InParanoid:Q8BK06 NextBio:333975
Bgee:Q8BK06 CleanEx:MM_FBXO9 Genevestigator:Q8BK06
GermOnline:ENSMUSG00000001366 Uniprot:Q8BK06
Length = 437
Score = 193 (73.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 37/92 (40%), Positives = 53/92 (57%)
Query: 34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
SWR+M+L RPR+R DG+Y+S+ TYIR G H V YYRYMRFFP G +
Sbjct: 243 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYMRFFPDGHVMMLT 302
Query: 93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
+ ++ + + R + D + GHY LS++
Sbjct: 303 TPEEPPSIVPRLRTRNTRTDAILLGHYRLSQD 334
>UNIPROTKB|Q3ZBT2 [details] [associations]
symbol:FBXO9 "F-box only protein 9" species:9913 "Bos
taurus" [GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0032006 "regulation of
TOR signaling cascade" evidence=ISS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA;ISS] InterPro:IPR001810 PROSITE:PS50181
UniPathway:UPA00143 SUPFAM:SSF81383 EMBL:DAAA02055275 EMBL:BC103124
IPI:IPI00701770 RefSeq:NP_001029584.1 UniGene:Bt.49317
ProteinModelPortal:Q3ZBT2 PRIDE:Q3ZBT2 Ensembl:ENSBTAT00000020074
GeneID:511798 KEGG:bta:511798 CTD:26268 eggNOG:NOG264152
HOGENOM:HOG000047162 HOVERGEN:HBG001041 InParanoid:Q3ZBT2 KO:K10295
OrthoDB:EOG46T31G NextBio:20870104 Uniprot:Q3ZBT2
Length = 437
Score = 191 (72.3 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 36/92 (39%), Positives = 54/92 (58%)
Query: 34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
SWR+M+L RPR+R DG+Y+S+ TYIR G H V YYRY+RFFP G +
Sbjct: 243 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYVRFFPDGHVMMLT 302
Query: 93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
+ ++ + + + R + D + GHY LS++
Sbjct: 303 TPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 334
>UNIPROTKB|Q9UK97 [details] [associations]
symbol:FBXO9 "F-box only protein 9" species:9606 "Homo
sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=NAS] [GO:0000151 "ubiquitin ligase complex" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA;NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IDA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0032006 "regulation of TOR signaling cascade" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50005 PROSITE:PS50181 PROSITE:PS50293
UniPathway:UPA00143 SUPFAM:SSF81383 GO:GO:0004842 GO:GO:0000151
CTD:26268 eggNOG:NOG264152 HOVERGEN:HBG001041 KO:K10295 OMA:LVWIHHS
EMBL:AF176704 EMBL:AY858798 EMBL:AL137520 EMBL:AK021559
EMBL:AB209833 EMBL:AL031178 EMBL:BC000650 EMBL:AF174597
IPI:IPI00296788 IPI:IPI00470655 IPI:IPI00470662 PIR:T46366
RefSeq:NP_036479.1 RefSeq:NP_258441.1 RefSeq:NP_258442.2
UniGene:Hs.216653 ProteinModelPortal:Q9UK97 SMR:Q9UK97
IntAct:Q9UK97 STRING:Q9UK97 PhosphoSite:Q9UK97 DMDM:13124238
PaxDb:Q9UK97 PRIDE:Q9UK97 DNASU:26268 Ensembl:ENST00000244426
Ensembl:ENST00000323557 Ensembl:ENST00000370939 GeneID:26268
KEGG:hsa:26268 UCSC:uc021zao.1 UCSC:uc021zap.1
GeneCards:GC06P052916 HGNC:HGNC:13588 MIM:609091 neXtProt:NX_Q9UK97
PharmGKB:PA28049 InParanoid:Q9UK97 ChiTaRS:FBXO9 GenomeRNAi:26268
NextBio:48545 ArrayExpress:Q9UK97 Bgee:Q9UK97 CleanEx:HS_FBXO9
Genevestigator:Q9UK97 GermOnline:ENSG00000112146 Uniprot:Q9UK97
Length = 447
Score = 191 (72.3 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 36/92 (39%), Positives = 54/92 (58%)
Query: 34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
SWR+M+L RPR+R DG+Y+S+ TYIR G H V YYRY+RFFP G +
Sbjct: 253 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLT 312
Query: 93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
+ ++ + + + R + D + GHY LS++
Sbjct: 313 TPEEPQSIVPRLRTRNTRTDAILLGHYRLSQD 344
>RGD|1310374 [details] [associations]
symbol:Fbxo9 "f-box protein 9" species:10116 "Rattus norvegicus"
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISO;ISS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISO;ISS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS] [GO:0032006 "regulation of TOR signaling cascade"
evidence=ISO;ISS] InterPro:IPR001810 PROSITE:PS50005
PROSITE:PS50181 PROSITE:PS50293 UniPathway:UPA00143 RGD:1310374
SUPFAM:SSF81383 CTD:26268 eggNOG:NOG264152 HOGENOM:HOG000047162
HOVERGEN:HBG001041 KO:K10295 OrthoDB:EOG46T31G
GeneTree:ENSGT00390000014256 EMBL:BC085831 IPI:IPI00373504
RefSeq:NP_001011998.1 UniGene:Rn.3335 ProteinModelPortal:Q5U2X1
STRING:Q5U2X1 PhosphoSite:Q5U2X1 PRIDE:Q5U2X1
Ensembl:ENSRNOT00000010961 GeneID:300849 KEGG:rno:300849
UCSC:RGD:1310374 InParanoid:Q5U2X1 NextBio:647636
Genevestigator:Q5U2X1 GermOnline:ENSRNOG00000008214 Uniprot:Q5U2X1
Length = 435
Score = 189 (71.6 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 36/92 (39%), Positives = 53/92 (57%)
Query: 34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
SWR+M+L RPR+R DG+Y+S+ TYIR G H V YYRY+RFFP G +
Sbjct: 241 SWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLT 300
Query: 93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
+ ++ + + R + D + GHY LS++
Sbjct: 301 TPEEPPSIVPRLRTRNTRTDAILLGHYRLSQD 332
>UNIPROTKB|F6Y9J3 [details] [associations]
symbol:fbxo9 "F-box only protein 9" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0032006 "regulation of TOR signaling cascade"
evidence=ISS] InterPro:IPR001810 PROSITE:PS50005 PROSITE:PS50181
PROSITE:PS50293 UniPathway:UPA00143 SUPFAM:SSF81383
GeneTree:ENSGT00390000014256 OMA:LVWIHHS EMBL:AAMC01037869
EMBL:AAMC01037870 Ensembl:ENSXETT00000034875 Uniprot:F6Y9J3
Length = 431
Score = 185 (70.2 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 35/92 (38%), Positives = 54/92 (58%)
Query: 34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
+WR+M+L RPR+R DG+Y+S+ TYIR G H V YYRY+RFFP G +
Sbjct: 236 TWRQMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYLRFFPDGHVMMLT 295
Query: 93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEE 124
+ + + + + + A+ D + GHY LS++
Sbjct: 296 TPEDPQTIVPRLRTKNARTDAMLLGHYRLSQD 327
>ZFIN|ZDB-GENE-030131-4194 [details] [associations]
symbol:fbxo9 "F-box protein 9" species:7955 "Danio
rerio" [GO:0032006 "regulation of TOR signaling cascade"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] InterPro:IPR001810 PROSITE:PS50005 PROSITE:PS50181
PROSITE:PS50293 UniPathway:UPA00143 ZFIN:ZDB-GENE-030131-4194
SUPFAM:SSF81383 InterPro:IPR003615 SMART:SM00507 CTD:26268
HOVERGEN:HBG001041 KO:K10295 EMBL:CR376766 EMBL:BC063957
EMBL:BC076528 IPI:IPI00866350 RefSeq:NP_956012.1 UniGene:Dr.79462
ProteinModelPortal:Q6P3K3 STRING:Q6P3K3 DNASU:325469
Ensembl:ENSDART00000102767 GeneID:325469 KEGG:dre:325469
GeneTree:ENSGT00390000014256 InParanoid:Q6P3K3 OMA:LVWIHHS
NextBio:20809299 ArrayExpress:Q6P3K3 Uniprot:Q6P3K3
Length = 421
Score = 174 (66.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 35/100 (35%), Positives = 55/100 (55%)
Query: 34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWK-ITNPVHIVCYYRYMRFFPSGRFIYKN 92
SWR+M+L RPR+R DG+Y+S+ +YIR G H V YYRY+RFFP G+ +
Sbjct: 226 SWREMFLERPRVRFDGVYISKTSYIRQGEESLDGFYRAWHQVEYYRYLRFFPDGQVMMLT 285
Query: 93 SSQKIKDVAKIMNFRAAKADCVFTGHYTLSEEKVEAAVLY 132
+ + + + ++ D + GHY LS++ +Y
Sbjct: 286 TPEDPLVTVPRLRSKNSRMDSIMFGHYRLSQDTDNQTKVY 325
>POMBASE|SPCC1827.08c [details] [associations]
symbol:pof7 "F-box protein Pof7" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 PomBase:SPCC1827.08c GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0030674 GO:GO:0006511 GO:GO:0000151
eggNOG:NOG264152 KO:K10295 OMA:ITYYRYL OrthoDB:EOG480N59
EMBL:AB062776 PIR:T41557 RefSeq:NP_588546.2 IntAct:O74531
STRING:O74531 EnsemblFungi:SPCC1827.08c.1 GeneID:2539142
KEGG:spo:SPCC1827.08c NextBio:20800314 Uniprot:O74531
Length = 361
Score = 167 (63.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 39/135 (28%), Positives = 69/135 (51%)
Query: 27 LQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGVAEWKITNPVHIVCYYRYMRFFPSG 86
L +Y+ SW+ ++L +PR R DG Y+S Y R G ++ P+H++ YYRY+R +P+
Sbjct: 181 LVEKYQQSWKTLFLKKPRSRFDGCYISVCRYFRPGTSDTSWNQPIHLITYYRYLRLYPNS 240
Query: 87 RFIYKNSSQKIKDVAK---IMN---FRAAKADCVF-------TGHYTLSEEKVEAAVLYP 133
I SS + DV + + N F + +F TG ++++ E ++YP
Sbjct: 241 TCIVYQSSNEPNDVVRNFSVQNTSLFSPMSSSPMFSNGNVALTGSWSMTPSG-EMLIVYP 299
Query: 134 GLRPTVLRIRLRLRG 148
+ +L++RG
Sbjct: 300 ASQTYTYVQKLQVRG 314
>ASPGD|ASPL0000006907 [details] [associations]
symbol:fbx1 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0071406 "cellular response to methylmercury" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SUPFAM:SSF81383 EMBL:BN001301
EMBL:AACD01000104 eggNOG:NOG264152 KO:K10295 OrthoDB:EOG480N59
RefSeq:XP_663690.1 EnsemblFungi:CADANIAT00006929 GeneID:2870926
KEGG:ani:AN6086.2 HOGENOM:HOG000214451 OMA:STVNYTR Uniprot:Q5B044
Length = 534
Score = 142 (55.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 34 SWRKMWLLRPRIRIDGLYVSRNTYIRAGVAE------WKITNPVHIVCYYRYMRFFPSGR 87
SW +++ PRIR G+Y+S Y RAG A W +P+HIV YYRY+RF+P G
Sbjct: 301 SWSEVFHSFPRIRFTGVYISTVNYTRAGAASAYSNISWN--SPIHIVTYYRYLRFYPDGT 358
Query: 88 FIY 90
IY
Sbjct: 359 VIY 361
>SGD|S000004087 [details] [associations]
symbol:HRT3 "Putative SCF-ubiquitin ligase F-box protein"
species:4932 "Saccharomyces cerevisiae" [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA;IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=ISA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI;ISA]
[GO:0071406 "cellular response to methylmercury" evidence=IMP]
PROSITE:PS50005 PROSITE:PS50181 PROSITE:PS50293 UniPathway:UPA00143
SGD:S000004087 GO:GO:0071406 GO:GO:0030674 EMBL:BK006945
GO:GO:0016567 GO:GO:0019005 EMBL:U53876 GO:GO:0031146
eggNOG:NOG264152 KO:K10295 GeneTree:ENSGT00390000014256 EMBL:Z73269
PIR:S64931 RefSeq:NP_013198.1 ProteinModelPortal:Q12347 SMR:Q12347
DIP:DIP-1629N IntAct:Q12347 MINT:MINT-404521 STRING:Q12347
PaxDb:Q12347 PeptideAtlas:Q12347 PRIDE:Q12347 EnsemblFungi:YLR097C
GeneID:850786 KEGG:sce:YLR097C CYGD:YLR097c HOGENOM:HOG000112953
OMA:ITYYRYL OrthoDB:EOG480N59 NextBio:966984 Genevestigator:Q12347
GermOnline:YLR097C Uniprot:Q12347
Length = 344
Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 17 LSGVVENYKILQSRYEGSWRKMWLLRPRIRIDGLYVSRNTYIRAGV-AEWKIT--NPVHI 73
L+G+ + + + G +M RP I+ +G+Y+S Y+R G AE ++ PVH+
Sbjct: 164 LNGITDINTFEKEIWRGDDYRMLRERPYIKFEGVYISVVNYVRYGSNAESSLSLLKPVHM 223
Query: 74 VCYYRYMRFFPSGRFIYKNSSQKIKDVAK 102
+ YYRY RF+ +G+ + S+ + V K
Sbjct: 224 ITYYRYFRFYENGQCLRLLSTDEPSAVVK 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 234 234 0.00087 113 3 11 22 0.39 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 615 (65 KB)
Total size of DFA: 197 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.92u 0.14s 19.06t Elapsed: 00:00:00
Total cpu time: 18.92u 0.14s 19.06t Elapsed: 00:00:00
Start: Sat May 11 03:48:07 2013 End: Sat May 11 03:48:07 2013