Query 026733
Match_columns 234
No_of_seqs 150 out of 1394
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 20:48:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026733.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026733hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 99.8 5.8E-19 2E-23 156.8 18.3 201 2-233 155-359 (425)
2 3nrn_A Uncharacterized protein 99.7 2.7E-16 9.4E-21 139.8 18.2 195 2-232 148-342 (421)
3 4dgk_A Phytoene dehydrogenase; 99.7 2.2E-16 7.5E-21 143.2 15.3 174 38-234 213-409 (501)
4 3nks_A Protoporphyrinogen oxid 99.5 8.5E-14 2.9E-18 125.3 15.3 203 1-232 162-402 (477)
5 2ivd_A PPO, PPOX, protoporphyr 99.5 4.5E-13 1.6E-17 120.6 15.6 203 1-233 167-403 (478)
6 3i6d_A Protoporphyrinogen oxid 99.5 2.2E-13 7.7E-18 121.8 13.4 204 1-233 168-397 (470)
7 1s3e_A Amine oxidase [flavin-c 99.5 2.9E-13 9.8E-18 123.6 14.0 202 2-233 165-374 (520)
8 4dsg_A UDP-galactopyranose mut 99.5 7.4E-13 2.5E-17 120.3 13.9 202 1-231 155-378 (484)
9 4gde_A UDP-galactopyranose mut 99.4 4.4E-13 1.5E-17 121.4 11.2 203 1-232 161-403 (513)
10 3lov_A Protoporphyrinogen oxid 99.4 5.1E-13 1.7E-17 120.3 10.2 197 1-232 166-393 (475)
11 2vvm_A Monoamine oxidase N; FA 99.4 5.3E-12 1.8E-16 114.3 13.6 198 1-233 206-408 (495)
12 2yg5_A Putrescine oxidase; oxi 99.4 1.1E-12 3.8E-17 117.3 9.0 198 2-232 165-371 (453)
13 1sez_A Protoporphyrinogen oxid 99.3 3.9E-12 1.3E-16 115.3 10.5 203 1-232 168-422 (504)
14 1b37_A Protein (polyamine oxid 99.2 2.3E-11 7.8E-16 109.7 7.8 167 39-233 199-379 (472)
15 2jae_A L-amino acid oxidase; o 99.2 8.9E-11 3.1E-15 106.0 9.9 167 37-233 230-401 (489)
16 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 5.1E-10 1.8E-14 96.5 13.0 163 42-232 108-275 (342)
17 3p1w_A Rabgdi protein; GDI RAB 98.9 1.2E-09 4.2E-14 98.8 7.3 90 13-111 220-313 (475)
18 2iid_A L-amino-acid oxidase; f 98.9 2.6E-08 8.8E-13 90.0 13.9 162 38-232 233-402 (498)
19 3k7m_X 6-hydroxy-L-nicotine ox 98.6 2.1E-06 7.3E-11 75.7 16.8 131 4-150 162-297 (431)
20 2z3y_A Lysine-specific histone 98.6 2.7E-07 9.1E-12 86.8 10.4 160 40-233 395-566 (662)
21 2b9w_A Putative aminooxidase; 98.5 5.5E-07 1.9E-11 79.5 11.4 94 11-119 170-265 (424)
22 4gut_A Lysine-specific histone 98.5 2.9E-07 9.9E-12 88.0 9.8 155 52-233 535-697 (776)
23 2xag_A Lysine-specific histone 98.5 4.1E-07 1.4E-11 87.7 9.7 159 39-233 565-737 (852)
24 1vg0_A RAB proteins geranylger 98.5 1.2E-06 4.1E-11 81.8 12.5 84 17-107 346-432 (650)
25 1yvv_A Amine oxidase, flavin-c 98.5 2.3E-06 7.9E-11 72.8 12.8 151 50-232 109-262 (336)
26 1d5t_A Guanine nucleotide diss 98.4 9.4E-07 3.2E-11 78.8 8.3 90 13-112 198-290 (433)
27 2bcg_G Secretory pathway GDP d 98.3 2.6E-06 9E-11 76.3 9.1 66 36-111 232-299 (453)
28 1rsg_A FMS1 protein; FAD bindi 98.1 3.2E-06 1.1E-10 76.8 6.3 97 40-150 197-306 (516)
29 3hdq_A UDP-galactopyranose mut 98.1 1.1E-06 3.9E-11 77.6 2.1 110 1-148 175-287 (397)
30 3ayj_A Pro-enzyme of L-phenyla 97.9 1.2E-05 4E-10 76.0 6.7 109 36-150 337-493 (721)
31 1i8t_A UDP-galactopyranose mut 97.9 3E-07 1E-11 80.3 -4.8 111 1-149 147-260 (367)
32 1v0j_A UDP-galactopyranose mut 97.7 5.2E-07 1.8E-11 79.7 -6.3 113 1-148 157-273 (399)
33 2bi7_A UDP-galactopyranose mut 97.5 5.7E-06 2E-10 72.6 -2.3 106 1-146 151-260 (384)
34 3dje_A Fructosyl amine: oxygen 97.4 0.00041 1.4E-08 61.2 8.3 57 48-112 162-221 (438)
35 3da1_A Glycerol-3-phosphate de 97.3 0.0034 1.2E-07 57.6 13.4 66 48-118 171-240 (561)
36 3fg2_P Putative rubredoxin red 97.2 0.00089 3E-08 58.7 8.3 58 45-110 182-239 (404)
37 3lxd_A FAD-dependent pyridine 97.2 0.00088 3E-08 58.9 8.3 58 45-110 192-249 (415)
38 1ryi_A Glycine oxidase; flavop 97.1 0.0032 1.1E-07 54.1 10.0 54 48-111 165-218 (382)
39 2i0z_A NAD(FAD)-utilizing dehy 97.0 0.0019 6.6E-08 57.4 7.9 59 46-112 133-191 (447)
40 4at0_A 3-ketosteroid-delta4-5a 97.0 0.0015 5.1E-08 59.1 7.2 57 48-110 203-262 (510)
41 3dme_A Conserved exported prot 96.9 0.0017 5.7E-08 55.3 7.0 57 48-112 151-209 (369)
42 3nlc_A Uncharacterized protein 96.9 0.0023 7.8E-08 58.7 7.7 57 48-112 221-277 (549)
43 3nyc_A D-arginine dehydrogenas 96.8 0.0022 7.4E-08 55.0 6.8 55 48-112 155-209 (381)
44 1y56_B Sarcosine oxidase; dehy 96.8 0.0039 1.3E-07 53.6 8.2 56 48-112 150-205 (382)
45 3cgv_A Geranylgeranyl reductas 96.6 0.0032 1.1E-07 54.2 6.6 65 48-117 103-168 (397)
46 1y0p_A Fumarate reductase flav 96.6 0.0055 1.9E-07 56.2 8.1 59 47-110 255-315 (571)
47 2gag_B Heterotetrameric sarcos 96.6 0.0044 1.5E-07 53.6 7.1 56 48-112 175-230 (405)
48 3ef6_A Toluene 1,2-dioxygenase 96.5 0.0034 1.2E-07 55.1 6.1 56 47-111 185-240 (410)
49 3axb_A Putative oxidoreductase 96.5 0.0048 1.6E-07 54.5 6.7 56 48-112 182-254 (448)
50 2cdu_A NADPH oxidase; flavoenz 96.5 0.0055 1.9E-07 54.4 7.0 58 45-111 189-246 (452)
51 3ps9_A TRNA 5-methylaminomethy 96.4 0.0063 2.1E-07 57.0 7.7 55 48-111 418-472 (676)
52 1q1r_A Putidaredoxin reductase 96.4 0.0073 2.5E-07 53.4 7.6 57 46-110 190-248 (431)
53 2rgh_A Alpha-glycerophosphate 96.4 0.0088 3E-07 55.0 8.3 60 48-112 189-250 (571)
54 3atr_A Conserved archaeal prot 96.4 0.013 4.6E-07 51.8 9.1 66 48-118 101-169 (453)
55 3iwa_A FAD-dependent pyridine 96.4 0.0098 3.4E-07 53.0 8.2 57 45-110 200-256 (472)
56 1d4d_A Flavocytochrome C fumar 96.4 0.011 3.7E-07 54.3 8.6 59 47-110 255-315 (572)
57 1trb_A Thioredoxin reductase; 96.4 0.013 4.4E-07 48.9 8.4 59 48-111 185-246 (320)
58 1pj5_A N,N-dimethylglycine oxi 96.3 0.0096 3.3E-07 57.1 8.2 56 48-112 152-207 (830)
59 3pvc_A TRNA 5-methylaminomethy 96.3 0.0072 2.5E-07 56.8 7.2 55 48-111 413-468 (689)
60 1qo8_A Flavocytochrome C3 fuma 96.3 0.0093 3.2E-07 54.6 7.7 58 48-110 251-310 (566)
61 2qcu_A Aerobic glycerol-3-phos 96.1 0.012 4.2E-07 53.0 7.6 59 48-112 150-210 (501)
62 1mo9_A ORF3; nucleotide bindin 96.1 0.014 4.7E-07 53.0 7.7 58 46-110 254-314 (523)
63 2wdq_A Succinate dehydrogenase 96.1 0.016 5.3E-07 53.6 8.0 60 48-111 144-205 (588)
64 2uzz_A N-methyl-L-tryptophan o 96.0 0.014 4.9E-07 49.7 7.2 60 48-118 150-209 (372)
65 2gf3_A MSOX, monomeric sarcosi 96.0 0.015 5.2E-07 49.9 7.4 55 48-112 151-205 (389)
66 2wpf_A Trypanothione reductase 96.0 0.014 4.7E-07 52.6 7.3 59 45-111 233-291 (495)
67 2cul_A Glucose-inhibited divis 96.0 0.016 5.6E-07 46.6 6.9 56 48-112 69-125 (232)
68 3oc4_A Oxidoreductase, pyridin 96.0 0.016 5.3E-07 51.4 7.4 57 45-111 187-243 (452)
69 3e1t_A Halogenase; flavoprotei 96.0 0.018 6.2E-07 51.9 7.9 65 48-118 112-179 (512)
70 1m6i_A Programmed cell death p 96.0 0.017 6E-07 51.9 7.7 56 46-110 225-280 (493)
71 2v3a_A Rubredoxin reductase; a 95.9 0.016 5.5E-07 50.1 7.2 56 46-110 186-241 (384)
72 1fec_A Trypanothione reductase 95.9 0.015 5.2E-07 52.2 7.2 59 45-111 229-287 (490)
73 2hqm_A GR, grase, glutathione 95.9 0.015 5.1E-07 52.1 7.1 59 45-110 224-283 (479)
74 2bs2_A Quinol-fumarate reducta 95.9 0.022 7.5E-07 53.4 8.4 59 48-111 159-219 (660)
75 1xdi_A RV3303C-LPDA; reductase 95.9 0.021 7E-07 51.4 7.9 58 45-111 221-278 (499)
76 3o0h_A Glutathione reductase; 95.8 0.019 6.3E-07 51.5 7.3 57 46-111 231-287 (484)
77 2oln_A NIKD protein; flavoprot 95.8 0.019 6.5E-07 49.6 7.1 54 48-111 154-207 (397)
78 3nix_A Flavoprotein/dehydrogen 95.8 0.02 6.9E-07 49.7 7.2 64 48-118 107-173 (421)
79 2ywl_A Thioredoxin reductase r 95.7 0.021 7.1E-07 43.7 6.3 54 47-111 56-109 (180)
80 4dna_A Probable glutathione re 95.7 0.018 6.1E-07 51.2 6.7 57 46-111 210-267 (463)
81 2x3n_A Probable FAD-dependent 95.7 0.018 6.2E-07 49.8 6.5 63 48-118 108-173 (399)
82 2h88_A Succinate dehydrogenase 95.7 0.022 7.7E-07 52.9 7.4 59 48-111 156-216 (621)
83 2e4g_A Tryptophan halogenase; 95.7 0.025 8.7E-07 51.5 7.6 63 48-118 195-260 (550)
84 3cty_A Thioredoxin reductase; 95.6 0.039 1.3E-06 46.0 8.0 57 50-111 193-251 (319)
85 3itj_A Thioredoxin reductase 1 95.6 0.03 1E-06 46.8 7.3 57 50-111 211-270 (338)
86 2weu_A Tryptophan 5-halogenase 95.6 0.032 1.1E-06 50.1 7.9 63 48-118 174-238 (511)
87 3v76_A Flavoprotein; structura 95.5 0.024 8.2E-07 50.0 6.7 55 48-112 133-187 (417)
88 2bc0_A NADH oxidase; flavoprot 95.5 0.023 8E-07 50.9 6.6 56 45-110 234-289 (490)
89 1ges_A Glutathione reductase; 95.5 0.026 8.9E-07 50.0 6.8 58 45-110 206-263 (450)
90 1zk7_A HGII, reductase, mercur 95.4 0.036 1.2E-06 49.2 7.5 56 46-111 215-270 (467)
91 2gmh_A Electron transfer flavo 95.4 0.045 1.5E-06 50.4 8.2 61 48-112 145-217 (584)
92 3cgb_A Pyridine nucleotide-dis 95.3 0.05 1.7E-06 48.6 8.0 56 46-111 226-281 (480)
93 3r9u_A Thioredoxin reductase; 95.2 0.049 1.7E-06 44.9 7.4 55 51-111 187-243 (315)
94 1kf6_A Fumarate reductase flav 95.2 0.044 1.5E-06 50.7 7.7 59 48-111 135-196 (602)
95 1onf_A GR, grase, glutathione 95.2 0.042 1.4E-06 49.4 7.4 59 45-111 215-274 (500)
96 2zbw_A Thioredoxin reductase; 95.2 0.075 2.6E-06 44.5 8.5 58 48-111 192-251 (335)
97 1n4w_A CHOD, cholesterol oxida 95.2 0.035 1.2E-06 50.1 6.8 58 50-111 224-287 (504)
98 2yqu_A 2-oxoglutarate dehydrog 95.1 0.042 1.4E-06 48.7 7.0 56 47-111 208-263 (455)
99 1nhp_A NADH peroxidase; oxidor 95.1 0.033 1.1E-06 49.2 6.3 56 46-111 190-245 (447)
100 2r9z_A Glutathione amide reduc 95.1 0.056 1.9E-06 48.1 7.7 57 45-110 205-262 (463)
101 1fl2_A Alkyl hydroperoxide red 95.1 0.085 2.9E-06 43.6 8.3 55 51-110 183-240 (310)
102 2gqf_A Hypothetical protein HI 95.1 0.061 2.1E-06 47.1 7.7 57 46-112 108-168 (401)
103 2aqj_A Tryptophan halogenase, 95.0 0.06 2.1E-06 48.8 7.7 57 48-112 166-222 (538)
104 2gqw_A Ferredoxin reductase; f 94.9 0.057 2E-06 47.2 7.2 53 45-110 185-237 (408)
105 1k0i_A P-hydroxybenzoate hydro 94.9 0.064 2.2E-06 46.1 7.5 64 48-118 104-170 (394)
106 3ab1_A Ferredoxin--NADP reduct 94.9 0.057 2E-06 45.9 7.0 58 48-111 203-262 (360)
107 1zmd_A Dihydrolipoyl dehydroge 94.9 0.078 2.7E-06 47.2 8.1 62 45-111 218-281 (474)
108 3ics_A Coenzyme A-disulfide re 94.8 0.058 2E-06 49.4 7.3 55 45-110 226-280 (588)
109 3h8l_A NADH oxidase; membrane 94.8 0.04 1.4E-06 47.9 5.9 52 46-110 217-268 (409)
110 3lad_A Dihydrolipoamide dehydr 94.8 0.084 2.9E-06 46.9 8.1 60 45-111 219-279 (476)
111 1rp0_A ARA6, thiazole biosynth 94.8 0.067 2.3E-06 44.3 6.9 58 48-110 120-189 (284)
112 1coy_A Cholesterol oxidase; ox 94.8 0.052 1.8E-06 49.0 6.6 58 50-111 229-292 (507)
113 4g6h_A Rotenone-insensitive NA 94.7 0.069 2.4E-06 48.2 7.2 57 45-110 270-330 (502)
114 3i3l_A Alkylhalidase CMLS; fla 94.5 0.073 2.5E-06 49.1 7.1 63 48-117 129-194 (591)
115 3urh_A Dihydrolipoyl dehydroge 94.5 0.12 4E-06 46.3 8.3 60 46-111 238-299 (491)
116 1ebd_A E3BD, dihydrolipoamide 94.5 0.081 2.8E-06 46.8 7.1 60 46-111 210-269 (455)
117 3c4n_A Uncharacterized protein 94.5 0.024 8.4E-07 49.4 3.6 54 48-111 173-235 (405)
118 2pyx_A Tryptophan halogenase; 94.4 0.11 3.7E-06 47.0 7.9 63 48-118 176-241 (526)
119 3f8d_A Thioredoxin reductase ( 94.4 0.15 5.2E-06 42.0 8.3 55 51-111 193-250 (323)
120 1ojt_A Surface protein; redox- 94.4 0.05 1.7E-06 48.6 5.6 61 45-111 224-285 (482)
121 2qae_A Lipoamide, dihydrolipoy 94.3 0.098 3.3E-06 46.4 7.4 60 45-111 213-275 (468)
122 3dk9_A Grase, GR, glutathione 94.2 0.17 5.7E-06 45.0 8.7 62 45-110 226-291 (478)
123 1v59_A Dihydrolipoamide dehydr 94.2 0.075 2.6E-06 47.3 6.3 60 46-111 223-286 (478)
124 2q0l_A TRXR, thioredoxin reduc 94.2 0.19 6.6E-06 41.4 8.5 57 50-111 181-240 (311)
125 1dxl_A Dihydrolipoamide dehydr 94.2 0.12 4E-06 45.9 7.5 60 46-111 217-278 (470)
126 3dgz_A Thioredoxin reductase 2 94.2 0.26 8.9E-06 44.0 9.8 61 46-111 224-286 (488)
127 1y56_A Hypothetical protein PH 94.1 0.064 2.2E-06 48.2 5.7 61 37-111 252-312 (493)
128 2eq6_A Pyruvate dehydrogenase 94.1 0.11 3.6E-06 46.3 7.0 57 46-110 209-269 (464)
129 2a8x_A Dihydrolipoyl dehydroge 94.1 0.14 4.7E-06 45.4 7.7 58 45-110 210-269 (464)
130 2q7v_A Thioredoxin reductase; 94.1 0.19 6.4E-06 41.9 8.2 56 50-111 190-248 (325)
131 2zxi_A TRNA uridine 5-carboxym 94.0 0.11 3.7E-06 48.4 7.2 55 48-111 124-179 (637)
132 4b1b_A TRXR, thioredoxin reduc 93.9 0.27 9.4E-06 44.8 9.6 83 18-110 234-317 (542)
133 4eqs_A Coenzyme A disulfide re 93.8 0.14 4.9E-06 45.1 7.4 53 45-110 186-238 (437)
134 3dgh_A TRXR-1, thioredoxin red 93.8 0.11 3.8E-06 46.3 6.6 60 46-110 226-287 (483)
135 1chu_A Protein (L-aspartate ox 93.8 0.11 3.8E-06 47.3 6.6 61 48-111 139-207 (540)
136 3lzw_A Ferredoxin--NADP reduct 93.7 0.11 3.9E-06 43.0 6.2 56 50-111 192-249 (332)
137 2qa2_A CABE, polyketide oxygen 93.7 0.19 6.4E-06 45.2 8.0 64 48-118 108-173 (499)
138 2qa1_A PGAE, polyketide oxygen 93.7 0.18 6.1E-06 45.4 7.8 64 48-118 107-172 (500)
139 2e5v_A L-aspartate oxidase; ar 93.7 0.11 3.7E-06 46.5 6.3 56 48-111 120-175 (472)
140 3ntd_A FAD-dependent pyridine 93.7 0.18 6E-06 45.8 7.8 56 47-110 192-265 (565)
141 3ihg_A RDME; flavoenzyme, anth 93.7 0.15 5.3E-06 45.9 7.4 67 48-118 121-190 (535)
142 3oz2_A Digeranylgeranylglycero 93.6 0.15 5.1E-06 43.3 6.9 65 48-117 103-168 (397)
143 3alj_A 2-methyl-3-hydroxypyrid 93.6 0.16 5.5E-06 43.5 7.1 59 48-118 108-167 (379)
144 3ces_A MNMG, tRNA uridine 5-ca 93.5 0.13 4.5E-06 48.0 6.6 56 48-112 125-181 (651)
145 4a9w_A Monooxygenase; baeyer-v 93.4 0.14 4.7E-06 42.9 6.3 55 48-111 77-131 (357)
146 2e1m_B L-glutamate oxidase; L- 93.2 0.11 3.9E-06 38.2 4.6 55 96-150 3-57 (130)
147 1vdc_A NTR, NADPH dependent th 93.1 0.33 1.1E-05 40.4 8.1 59 50-111 197-258 (333)
148 3k30_A Histamine dehydrogenase 93.1 0.15 5.2E-06 47.7 6.5 56 48-111 568-623 (690)
149 3h28_A Sulfide-quinone reducta 93.0 0.14 4.6E-06 45.0 5.7 51 49-109 202-253 (430)
150 1kdg_A CDH, cellobiose dehydro 92.9 0.14 4.6E-06 46.5 5.8 56 52-112 200-261 (546)
151 1jnr_A Adenylylsulfate reducta 92.7 0.29 9.9E-06 45.5 7.8 62 48-111 152-217 (643)
152 1xhc_A NADH oxidase /nitrite r 92.6 0.13 4.5E-06 44.2 5.1 52 45-110 181-232 (367)
153 3fmw_A Oxygenase; mithramycin, 92.3 0.12 4.1E-06 47.4 4.6 64 48-118 149-214 (570)
154 1fl2_A Alkyl hydroperoxide red 92.2 0.33 1.1E-05 40.0 6.8 57 48-110 57-113 (310)
155 3s5w_A L-ornithine 5-monooxyge 92.2 0.45 1.6E-05 41.8 8.1 46 60-111 329-376 (463)
156 2bry_A NEDD9 interacting prote 92.1 0.16 5.6E-06 45.6 5.2 62 48-112 167-230 (497)
157 3gyx_A Adenylylsulfate reducta 92.1 0.26 8.7E-06 46.1 6.6 61 48-110 167-231 (662)
158 2a87_A TRXR, TR, thioredoxin r 92.1 0.2 7E-06 42.0 5.5 55 51-111 194-251 (335)
159 3hyw_A Sulfide-quinone reducta 91.9 0.28 9.7E-06 43.0 6.3 53 48-110 201-254 (430)
160 1hyu_A AHPF, alkyl hydroperoxi 91.8 0.46 1.6E-05 42.8 7.9 55 51-110 394-451 (521)
161 4ap3_A Steroid monooxygenase; 91.8 0.3 1E-05 44.5 6.7 56 48-110 100-157 (549)
162 3gwf_A Cyclohexanone monooxyge 91.8 0.3 1E-05 44.4 6.6 56 48-110 88-145 (540)
163 3pl8_A Pyranose 2-oxidase; sub 91.8 0.21 7.2E-06 46.3 5.6 86 60-148 273-371 (623)
164 3ab1_A Ferredoxin--NADP reduct 91.6 0.38 1.3E-05 40.6 6.8 55 48-110 75-129 (360)
165 3klj_A NAD(FAD)-dependent dehy 91.5 0.22 7.6E-06 43.2 5.2 52 48-110 63-114 (385)
166 3kd9_A Coenzyme A disulfide re 91.5 0.29 9.9E-06 43.1 6.0 55 45-110 188-242 (449)
167 3d1c_A Flavin-containing putat 91.5 0.41 1.4E-05 40.4 6.8 54 48-111 89-142 (369)
168 1lvl_A Dihydrolipoamide dehydr 91.1 0.32 1.1E-05 43.0 5.9 55 46-111 211-267 (458)
169 2vou_A 2,6-dihydroxypyridine h 91.0 0.5 1.7E-05 40.7 7.0 57 52-117 100-159 (397)
170 3lzw_A Ferredoxin--NADP reduct 91.0 0.33 1.1E-05 40.1 5.7 55 47-110 67-121 (332)
171 3fbs_A Oxidoreductase; structu 91.0 0.44 1.5E-05 38.6 6.3 51 48-111 175-225 (297)
172 2zbw_A Thioredoxin reductase; 91.0 0.45 1.5E-05 39.6 6.5 54 48-110 66-119 (335)
173 3cp8_A TRNA uridine 5-carboxym 91.0 0.39 1.3E-05 44.8 6.4 55 48-111 118-173 (641)
174 2xve_A Flavin-containing monoo 90.9 0.56 1.9E-05 41.6 7.3 59 48-110 102-164 (464)
175 3rp8_A Flavoprotein monooxygen 90.9 0.3 1E-05 42.2 5.4 59 48-117 128-187 (407)
176 2jbv_A Choline oxidase; alcoho 90.7 0.26 9E-06 44.8 5.1 49 59-111 221-272 (546)
177 3vrd_B FCCB subunit, flavocyto 90.5 0.072 2.5E-06 46.1 1.1 46 56-110 211-256 (401)
178 3d1c_A Flavin-containing putat 90.2 0.42 1.4E-05 40.3 5.6 54 48-110 215-270 (369)
179 3ic9_A Dihydrolipoamide dehydr 90.0 0.85 2.9E-05 40.7 7.7 58 46-111 214-273 (492)
180 2dkh_A 3-hydroxybenzoate hydro 89.6 0.56 1.9E-05 43.4 6.4 69 48-118 142-218 (639)
181 3uox_A Otemo; baeyer-villiger 89.6 0.52 1.8E-05 42.9 6.0 56 48-110 88-145 (545)
182 1hyu_A AHPF, alkyl hydroperoxi 89.5 0.69 2.4E-05 41.7 6.8 57 48-110 268-324 (521)
183 3qfa_A Thioredoxin reductase 1 89.2 2.4 8.3E-05 38.0 10.1 62 46-111 249-314 (519)
184 3sx6_A Sulfide-quinone reducta 88.9 0.63 2.1E-05 40.8 5.9 52 49-109 210-266 (437)
185 3c96_A Flavin-containing monoo 88.9 1 3.4E-05 38.9 7.1 63 48-117 108-175 (410)
186 2gv8_A Monooxygenase; FMO, FAD 88.8 0.79 2.7E-05 40.2 6.5 58 48-111 116-176 (447)
187 4fk1_A Putative thioredoxin re 88.8 0.67 2.3E-05 38.2 5.8 53 48-109 181-233 (304)
188 3itj_A Thioredoxin reductase 1 88.8 0.43 1.5E-05 39.5 4.6 57 47-110 84-140 (338)
189 3f8d_A Thioredoxin reductase ( 88.8 0.74 2.5E-05 37.7 6.0 54 48-111 71-124 (323)
190 2q0l_A TRXR, thioredoxin reduc 88.6 1 3.4E-05 36.9 6.7 53 48-110 60-112 (311)
191 2xdo_A TETX2 protein; tetracyc 88.5 0.37 1.3E-05 41.5 4.1 49 61-118 140-189 (398)
192 1vdc_A NTR, NADPH dependent th 88.0 1 3.5E-05 37.3 6.4 53 48-111 71-123 (333)
193 3qvp_A Glucose oxidase; oxidor 87.9 0.5 1.7E-05 43.5 4.7 51 58-111 238-292 (583)
194 1w4x_A Phenylacetone monooxyge 87.5 1.1 3.7E-05 40.5 6.7 56 49-111 96-153 (542)
195 1ps9_A 2,4-dienoyl-COA reducta 87.3 1.6 5.3E-05 40.6 7.8 52 48-111 574-627 (671)
196 2gag_A Heterotetrameric sarcos 86.8 1 3.5E-05 43.9 6.4 53 54-110 323-381 (965)
197 2vdc_G Glutamate synthase [NAD 86.5 0.48 1.6E-05 42.1 3.7 52 53-110 308-376 (456)
198 2gjc_A Thiazole biosynthetic e 86.4 2.7 9.2E-05 35.7 8.1 64 48-111 147-238 (326)
199 3s5w_A L-ornithine 5-monooxyge 85.5 1.3 4.4E-05 38.8 5.9 58 49-110 129-190 (463)
200 1trb_A Thioredoxin reductase; 85.3 1.6 5.4E-05 35.8 6.1 52 48-110 63-114 (320)
201 2q7v_A Thioredoxin reductase; 85.2 1.5 5.1E-05 36.2 6.0 55 48-111 66-122 (325)
202 1gte_A Dihydropyrimidine dehyd 85.2 1.8 6E-05 42.5 7.2 55 51-110 374-440 (1025)
203 2x8g_A Thioredoxin glutathione 84.6 4.6 0.00016 36.7 9.4 63 45-111 324-394 (598)
204 2a87_A TRXR, TR, thioredoxin r 83.9 1.5 5E-05 36.6 5.3 52 48-110 72-124 (335)
205 3jsk_A Cypbp37 protein; octame 83.9 3.3 0.00011 35.5 7.5 64 48-111 161-250 (344)
206 1q1r_A Putidaredoxin reductase 83.5 2.3 7.9E-05 37.1 6.7 47 53-110 66-112 (431)
207 3q9t_A Choline dehydrogenase a 83.4 1.3 4.4E-05 40.6 5.1 50 58-111 217-269 (577)
208 3fim_B ARYL-alcohol oxidase; A 82.9 0.91 3.1E-05 41.6 3.9 50 58-112 219-276 (566)
209 1ju2_A HydroxynitrIle lyase; f 82.8 1.7 5.7E-05 39.4 5.5 56 53-111 200-260 (536)
210 3cty_A Thioredoxin reductase; 82.6 2.7 9.1E-05 34.6 6.4 52 48-110 73-124 (319)
211 2r0c_A REBC; flavin adenine di 82.3 2.7 9.3E-05 38.0 6.8 61 49-118 140-203 (549)
212 1lqt_A FPRA; NADP+ derivative, 82.1 1.1 3.6E-05 39.8 3.9 55 51-111 250-325 (456)
213 1cjc_A Protein (adrenodoxin re 81.9 2.1 7.3E-05 37.8 5.8 49 60-111 270-332 (460)
214 3t37_A Probable dehydrogenase; 81.9 1.4 4.9E-05 39.2 4.7 52 59-115 223-274 (526)
215 1gpe_A Protein (glucose oxidas 81.8 1.2 4.2E-05 40.8 4.3 52 58-111 242-296 (587)
216 1o94_A Tmadh, trimethylamine d 81.2 2.5 8.6E-05 39.7 6.3 26 50-75 574-599 (729)
217 1xhc_A NADH oxidase /nitrite r 80.8 1.6 5.3E-05 37.4 4.4 48 51-110 64-111 (367)
218 3ef6_A Toluene 1,2-dioxygenase 80.8 2.8 9.5E-05 36.3 6.1 48 53-111 63-110 (410)
219 4hb9_A Similarities with proba 79.5 2.5 8.4E-05 35.8 5.3 56 53-116 114-171 (412)
220 3fbs_A Oxidoreductase; structu 78.4 3.8 0.00013 32.9 5.9 54 48-111 57-111 (297)
221 3hyw_A Sulfide-quinone reducta 78.3 0.89 3E-05 39.8 2.0 51 49-111 58-108 (430)
222 3l8k_A Dihydrolipoyl dehydroge 78.3 3 0.0001 36.7 5.5 55 48-111 215-271 (466)
223 4eqs_A Coenzyme A disulfide re 77.8 3 0.0001 36.5 5.3 53 53-111 63-115 (437)
224 3uox_A Otemo; baeyer-villiger 76.7 2.3 8E-05 38.5 4.4 50 50-113 341-392 (545)
225 3lxd_A FAD-dependent pyridine 76.2 4.5 0.00015 34.9 6.0 51 49-110 67-117 (415)
226 3oc4_A Oxidoreductase, pyridin 74.9 4.7 0.00016 35.2 5.9 50 53-110 64-113 (452)
227 3ics_A Coenzyme A-disulfide re 73.0 6.9 0.00023 35.5 6.6 54 49-110 95-150 (588)
228 2gqw_A Ferredoxin reductase; f 71.6 4.5 0.00015 34.9 4.9 44 56-110 68-111 (408)
229 1nhp_A NADH peroxidase; oxidor 71.5 11 0.00038 32.7 7.4 54 49-110 58-113 (447)
230 3gwf_A Cyclohexanone monooxyge 71.5 2.5 8.7E-05 38.2 3.3 43 57-112 340-384 (540)
231 2v3a_A Rubredoxin reductase; a 71.4 9.5 0.00033 32.3 6.8 46 53-110 66-111 (384)
232 3sx6_A Sulfide-quinone reducta 71.0 7.1 0.00024 33.9 6.0 51 49-111 61-111 (437)
233 3h8l_A NADH oxidase; membrane 70.5 3.4 0.00012 35.4 3.8 51 48-110 57-111 (409)
234 2cdu_A NADPH oxidase; flavoenz 70.0 8.6 0.0003 33.5 6.4 54 49-110 60-115 (452)
235 2e1m_A L-glutamate oxidase; L- 69.9 5.5 0.00019 34.4 5.0 34 41-78 315-348 (376)
236 1pn0_A Phenol 2-monooxygenase; 69.7 7.6 0.00026 36.0 6.2 29 49-77 121-152 (665)
237 3ntd_A FAD-dependent pyridine 68.4 5.8 0.0002 35.6 5.0 54 49-110 60-115 (565)
238 3cgb_A Pyridine nucleotide-dis 67.3 8.9 0.0003 33.8 5.9 51 52-110 97-150 (480)
239 3r9u_A Thioredoxin reductase; 66.4 11 0.00038 30.3 6.0 55 47-110 62-116 (315)
240 3kd9_A Coenzyme A disulfide re 66.4 6.7 0.00023 34.2 4.8 43 57-110 69-112 (449)
241 4fk1_A Putative thioredoxin re 66.4 10 0.00036 30.8 5.8 55 48-110 61-115 (304)
242 3fg2_P Putative rubredoxin red 66.2 12 0.00043 31.9 6.5 50 49-110 59-108 (404)
243 2bc0_A NADH oxidase; flavoprot 65.9 7.7 0.00026 34.3 5.2 54 49-110 94-147 (490)
244 4a5l_A Thioredoxin reductase; 65.6 50 0.0017 26.4 10.0 57 50-111 191-249 (314)
245 1m6i_A Programmed cell death p 64.5 5.9 0.0002 35.2 4.2 41 59-110 102-142 (493)
246 3iwa_A FAD-dependent pyridine 62.0 14 0.00048 32.3 6.2 45 58-110 77-123 (472)
247 1ebd_A E3BD, dihydrolipoamide 59.4 19 0.00067 31.2 6.6 49 50-110 94-143 (455)
248 3vrd_B FCCB subunit, flavocyto 58.6 21 0.00072 30.2 6.5 45 55-111 63-107 (401)
249 4a5l_A Thioredoxin reductase; 58.1 16 0.00055 29.5 5.5 53 48-110 67-119 (314)
250 4ap3_A Steroid monooxygenase; 57.9 7.2 0.00025 35.3 3.5 47 53-113 349-397 (549)
251 4b63_A L-ornithine N5 monooxyg 57.9 19 0.00066 31.9 6.3 61 49-110 147-212 (501)
252 3h28_A Sulfide-quinone reducta 55.0 5.2 0.00018 34.6 2.0 51 49-111 58-108 (430)
253 3g3e_A D-amino-acid oxidase; F 54.2 3.3 0.00011 34.6 0.6 49 48-118 143-191 (351)
254 2a8x_A Dihydrolipoyl dehydroge 53.2 24 0.00081 30.7 6.1 49 51-111 95-145 (464)
255 1dxl_A Dihydrolipoamide dehydr 50.2 22 0.00076 30.9 5.4 48 51-110 100-149 (470)
256 1v59_A Dihydrolipoamide dehydr 46.2 25 0.00084 30.7 5.0 48 52-111 101-156 (478)
257 1y56_A Hypothetical protein PH 45.6 23 0.00078 31.3 4.7 51 51-110 165-217 (493)
258 4a9w_A Monooxygenase; baeyer-v 44.6 17 0.00057 29.7 3.5 39 59-111 246-284 (357)
259 2e1m_C L-glutamate oxidase; L- 43.1 3.3 0.00011 31.8 -1.0 33 199-231 37-71 (181)
260 1ojt_A Surface protein; redox- 42.1 33 0.0011 30.0 5.2 48 52-111 100-159 (482)
261 1w4x_A Phenylacetone monooxyge 40.8 24 0.00083 31.5 4.2 48 51-112 342-391 (542)
262 1ghh_A DINI, DNA-damage-induci 40.6 49 0.0017 21.9 4.6 34 201-234 3-36 (81)
263 2qae_A Lipoamide, dihydrolipoy 40.3 43 0.0015 29.1 5.6 48 51-110 97-146 (468)
264 1lvl_A Dihydrolipoamide dehydr 37.5 75 0.0026 27.5 6.8 43 53-110 102-144 (458)
265 2eq6_A Pyruvate dehydrogenase 37.2 60 0.002 28.2 6.1 43 53-110 99-141 (464)
266 1xdi_A RV3303C-LPDA; reductase 36.3 61 0.0021 28.4 6.0 54 51-110 99-154 (499)
267 4gcm_A TRXR, thioredoxin reduc 34.1 84 0.0029 25.1 6.2 52 48-110 63-114 (312)
268 3l8k_A Dihydrolipoyl dehydroge 33.8 44 0.0015 29.1 4.6 48 51-110 93-142 (466)
269 2gag_A Heterotetrameric sarcos 33.6 56 0.0019 31.6 5.7 57 49-111 183-252 (965)
270 2r9z_A Glutathione amide reduc 30.7 87 0.003 27.1 6.0 44 52-110 97-140 (463)
271 2hqm_A GR, grase, glutathione 30.4 55 0.0019 28.6 4.7 47 52-110 110-158 (479)
272 2wpf_A Trypanothione reductase 30.2 78 0.0027 27.8 5.7 48 52-110 112-165 (495)
273 1zmd_A Dihydrolipoyl dehydroge 30.1 82 0.0028 27.3 5.8 47 52-110 102-150 (474)
274 1p3q_Q VPS9P, vacuolar protein 30.0 31 0.0011 21.0 2.1 15 220-234 12-26 (54)
275 1zk7_A HGII, reductase, mercur 26.8 91 0.0031 26.9 5.4 44 55-110 102-148 (467)
276 1ges_A Glutathione reductase; 25.4 1.2E+02 0.004 26.1 5.9 44 52-110 98-141 (450)
277 1fec_A Trypanothione reductase 25.2 1.2E+02 0.0041 26.5 6.0 48 52-110 108-161 (490)
278 2yqu_A 2-oxoglutarate dehydrog 24.9 57 0.0019 28.1 3.7 46 52-110 94-139 (455)
279 3c4a_A Probable tryptophan hyd 24.4 30 0.001 29.1 1.7 50 48-117 99-148 (381)
280 3klj_A NAD(FAD)-dependent dehy 24.0 32 0.0011 29.3 1.9 29 45-73 186-214 (385)
281 4id3_A DNA repair protein REV1 23.2 80 0.0027 20.3 3.5 17 50-66 23-39 (92)
282 2xve_A Flavin-containing monoo 22.1 77 0.0026 27.6 4.0 22 87-111 254-275 (464)
283 2ahq_A Sigma-54, RNA polymeras 21.8 92 0.0031 20.2 3.3 42 14-64 13-54 (76)
284 1mo9_A ORF3; nucleotide bindin 21.8 1.3E+02 0.0043 26.6 5.4 39 58-110 146-184 (523)
285 1use_A VAsp, vasodilator-stimu 21.7 71 0.0024 18.5 2.4 14 216-229 13-26 (45)
286 2dhy_A CUE domain-containing p 21.2 52 0.0018 20.8 2.0 13 222-234 20-32 (67)
287 3dk9_A Grase, GR, glutathione 21.1 1.2E+02 0.0043 26.1 5.2 47 51-110 112-158 (478)
288 1wf6_A Similar to S.pombe -RAD 20.8 1E+02 0.0034 21.8 3.8 18 48-65 54-71 (132)
289 3urh_A Dihydrolipoyl dehydroge 20.8 2.2E+02 0.0074 24.7 6.7 48 51-110 119-168 (491)
290 4b63_A L-ornithine N5 monooxyg 20.6 1.1E+02 0.0039 26.8 4.9 43 63-111 355-408 (501)
291 3lad_A Dihydrolipoamide dehydr 20.4 1.2E+02 0.0042 26.1 5.0 48 51-110 103-152 (476)
292 1c0p_A D-amino acid oxidase; a 20.4 40 0.0014 27.9 1.7 43 48-112 143-185 (363)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.82 E-value=5.8e-19 Score=156.78 Aligned_cols=201 Identities=14% Similarity=0.172 Sum_probs=149.3
Q ss_pred chHHHHHcCCCCcccccHHHHHHHHHHHhcCCccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCC
Q 026733 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (234)
Q Consensus 2 w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~ 81 (234)
|+|++....+.+++++|+..++..+..+... ....++.|++. .++++|++.++++|++|++|++|++|..++ +
T Consensus 155 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~---~~~~~~~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 227 (425)
T 3ka7_A 155 ADSFCGWALSLKSDEVPVEEVFEIIENMYRF---GGTGIPEGGCK-GIIDALETVISANGGKIHTGQEVSKILIEN---G 227 (425)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH---CSCEEETTSHH-HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T
T ss_pred HHHHHHHHhCCCcccchHHHHHHHHHHHHhc---CCccccCCCHH-HHHHHHHHHHHHcCCEEEECCceeEEEEEC---C
Confidence 5677767788899999999988888764321 12457888875 699999999999999999999999999986 5
Q ss_pred cceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCccc---CchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHH
Q 026733 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWR---EMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERS 158 (234)
Q Consensus 82 ~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~---~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~ 158 (234)
++++|.+ +|+.+.||.||+|+|+..+.+|++.... +..+.+++.++++.+.+++++++++++.
T Consensus 228 --~~~gv~~----~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-------- 293 (425)
T 3ka7_A 228 --KAAGIIA----DDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV-------- 293 (425)
T ss_dssp --EEEEEEE----TTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--------
T ss_pred --EEEEEEE----CCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc--------
Confidence 7888876 6889999999999999998899975321 3456777888888889999999999754
Q ss_pred HHhhhhcCCCcccccCCCC-cchhhhcccCCccccccCCCceEEEEEeeCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 159 RQLRRALGLDNLLYTPDAD-FSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 159 ~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
...++++..+.. +..+...+..+| +++|+| ++++.+++.......+. +++++++++++|++++|+
T Consensus 294 -------~~~~~~~~~~~~~~~~~~~~s~~~p-~~ap~G-~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~ 359 (425)
T 3ka7_A 294 -------GHTGVLLTPYTRRINGVNEVTQADP-ELAPPG-KHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPG 359 (425)
T ss_dssp -------CSSSEEECCSSSSEEEEECGGGTCG-GGSCTT-CEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTT
T ss_pred -------CcCEEEECCChhhcceEEeccCCCC-CcCCCC-CeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCC
Confidence 234455444332 222334456778 478887 56666655433222222 345679999999999985
No 2
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.72 E-value=2.7e-16 Score=139.76 Aligned_cols=195 Identities=13% Similarity=0.137 Sum_probs=143.2
Q ss_pred chHHHHHcCCCCcccccHHHHHHHHHHHhcCCccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCC
Q 026733 2 WDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANA 81 (234)
Q Consensus 2 w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~ 81 (234)
+.|++....+.++.++|+..++..+..+.... ...+++|++. .++++|++.++++|++|++|++|++|..++ +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~ 220 (421)
T 3nrn_A 148 LESFAGWADSVSLSDLTALELAKEIRAALRWG---GPGLIRGGCK-AVIDELERIIMENKGKILTRKEVVEINIEE---K 220 (421)
T ss_dssp HHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHC---SCEEETTCHH-HHHHHHHHHHHTTTCEEESSCCEEEEETTT---T
T ss_pred HHHHHHHhcCCCcccCCHHHHHHHHHHHhhcC---CcceecCCHH-HHHHHHHHHHHHCCCEEEcCCeEEEEEEEC---C
Confidence 56776677788999999999888887643211 2467888875 699999999999999999999999999876 4
Q ss_pred cceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHh
Q 026733 82 ETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQL 161 (234)
Q Consensus 82 ~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l 161 (234)
++ | . .+|+.+.||.||+|+++..+.+|++....+..+.+.+.++++.+++.+++.++++..
T Consensus 221 --~v--V-~---~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~----------- 281 (421)
T 3nrn_A 221 --KV--Y-T---RDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPR----------- 281 (421)
T ss_dssp --EE--E-E---TTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCS-----------
T ss_pred --EE--E-E---eCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcc-----------
Confidence 44 4 3 378899999999999999988999743223346677888988899999999998643
Q ss_pred hhhcCCCcccccCCCCcchhhhcccCCccccccCCCceEEEEEeeCCCCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 162 RRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
...++++.++..+......+..+| ..+|+| ++++.+...-.+ .+.+|..+.++++|++++|
T Consensus 282 ----~~~~~~~~~~~~~~~i~~~s~~~p-~~ap~G-~~~~~~~~~~~~----~~~~~~~~~~~~~L~~~~p 342 (421)
T 3nrn_A 282 ----IGNTIVFTPGLMINGFNEPSALDK-SLAREG-YTLIMAHMALKN----GNVKKAIEKGWEELLEIFP 342 (421)
T ss_dssp ----SCSSEEECTTSSSCEEECGGGTCG-GGSCTT-EEEEEEEEECTT----CCHHHHHHHHHHHHHHHCT
T ss_pred ----cCCeEEEcCCcceeeEeccCCCCC-CcCCCC-ceEEEEEEeecc----ccHHHHHHHHHHHHHHHcC
Confidence 234666665543222333455677 477876 555555443221 2335668999999999998
No 3
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.70 E-value=2.2e-16 Score=143.17 Aligned_cols=174 Identities=18% Similarity=0.209 Sum_probs=106.4
Q ss_pred eeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh-hHhhh
Q 026733 38 LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP-GIKRL 116 (234)
Q Consensus 38 ~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~-~~~~L 116 (234)
..+++|+.+ .|+++|++.++++||+|++|++|++|.+++ + ++++|++ .+|+++.||+||+|+++. ++.+|
T Consensus 213 ~~~p~GG~~-~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~---~--~~~gV~~---~~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 213 VWFPRGGTG-ALVQGMIKLFQDLGGEVVLNARVSHMETTG---N--KIEAVHL---EDGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp EEEETTHHH-HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEE---TTSCEEECSCEEECCC--------
T ss_pred eEEeCCCCc-chHHHHHHHHHHhCCceeeecceeEEEeeC---C--eEEEEEe---cCCcEEEcCEEEECCCHHHHHHHh
Confidence 346888887 699999999999999999999999999997 5 8999998 499999999999999986 56778
Q ss_pred CCCcccCchHHHHhhcCC-CCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccccC---------------CCCcch
Q 026733 117 LPSSWREMKFFNNIYALV-GVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTP---------------DADFSC 180 (234)
Q Consensus 117 l~~~~~~~~~~~~~~~l~-~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------~~~~~~ 180 (234)
+++.+....+.+++.+.+ ..+.+++++.++++...+. ..++.+.. ....++
T Consensus 284 l~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~-------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
T 4dgk_A 284 LSQHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLA-------------HHTVCFGPRYRELIDEIFNHDGLAEDFSL 350 (501)
T ss_dssp -------------------CCEEEEEEEEESSCCTTSC-------------SEEEEEECC-------------CCCEEEE
T ss_pred ccccccchhhhhhhhccccCCceeEEEecccCCccccc-------------cceeccccchhhhccccccccccccCCce
Confidence 887654444455566666 4588899999998754211 01111111 111233
Q ss_pred hhhc-ccCCccccccCCCceEEEEEeeCCCCCCC----CCHHHHHHHHHHHHHhhC-CCC
Q 026733 181 FADL-ALTSPEDYYREGQGSLLQCVLTPGDPYMP----LPNDEIIRRVAKQLYFHH-PKV 234 (234)
Q Consensus 181 ~~~~-~~~~p~~~~~~g~~~~~~~~~~~~~~~~~----~~~eei~~~~l~~L~~~~-P~~ 234 (234)
|.+. +..|| +++|+|+.++..++..+...+.+ ..+|++.+++++.|++.+ |++
T Consensus 351 ~v~~~s~~dp-~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~ 409 (501)
T 4dgk_A 351 YLHAPCVTDS-SLAPEGCGSYYVLAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGL 409 (501)
T ss_dssp EEECGGGTCG-GGSSTTCEEEEEEEEECCTTTSCCCHHHHHHHHHHHHHHHHHHHTCTTH
T ss_pred ecccCCCCCC-CcCCCCCceEEEEEecCccccccccHHHHHHHHHHHHHHHHHHhhCCCh
Confidence 4333 46788 48998865544444444433322 235788999999998754 863
No 4
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.55 E-value=8.5e-14 Score=125.28 Aligned_cols=203 Identities=15% Similarity=0.155 Sum_probs=138.7
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHhc-----------C----------------CccceeeecCCCCcccchHHH
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-----------K----------------TEASLLRMLKGSPDVYLSGPI 53 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~-----------~----------------~~~~~~g~~~g~~~~~l~~~l 53 (234)
+|+|++.+....+++++|+.+++..+..... . ..+..+.+++|+++ .++++|
T Consensus 162 ~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l 240 (477)
T 3nks_A 162 AMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLE-MLPQAL 240 (477)
T ss_dssp THHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTT-HHHHHH
T ss_pred HHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHH-HHHHHH
Confidence 5789988999999999999997665443210 0 11224567888887 699999
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcC
Q 026733 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYAL 133 (234)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l 133 (234)
++.++++|++|++|++|++|..+++ +++.|.+ +|+.+.||+||+|+|++.+.+|++... .+..+.+.++
T Consensus 241 ~~~l~~~g~~i~~~~~V~~i~~~~~-----~~~~v~~----~~~~~~ad~vv~a~p~~~~~~ll~~~~--~~~~~~l~~~ 309 (477)
T 3nks_A 241 ETHLTSRGVSVLRGQPVCGLSLQAE-----GRWKVSL----RDSSLEADHVISAIPASVLSELLPAEA--APLARALSAI 309 (477)
T ss_dssp HHHHHHTTCEEECSCCCCEEEECGG-----GCEEEEC----SSCEEEESEEEECSCHHHHHHHSCGGG--HHHHHHHHTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEEcCC-----ceEEEEE----CCeEEEcCEEEECCCHHHHHHhccccC--HHHHHHHhcC
Confidence 9999999999999999999998763 3455643 566899999999999999999998532 2456678888
Q ss_pred CCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccccCC-C--Ccc-hhhhcccCCccccc-cCCCceEEEEEeeCC
Q 026733 134 VGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPD-A--DFS-CFADLALTSPEDYY-REGQGSLLQCVLTPG 208 (234)
Q Consensus 134 ~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~--~~~-~~~~~~~~~p~~~~-~~g~~~~~~~~~~~~ 208 (234)
.+.++.+|++.|+++..+.. .+ .++..+. + ... +|.... .| ... +++ .+++.+++...
T Consensus 310 ~~~~~~~v~l~~~~~~~~~~------------~~-g~l~~~~~~~~~~~~~~~s~~--~~-~~~~~~~-~~~l~~~~gg~ 372 (477)
T 3nks_A 310 TAVSVAVVNLQYQGAHLPVQ------------GF-GHLVPSSEDPGVLGIVYDSVA--FP-EQDGSPP-GLRVTVMLGGS 372 (477)
T ss_dssp CEEEEEEEEEEETTCCCSSC------------SS-EEECCTTTCSSEEEEECHHHH--CG-GGSTTTT-CEEEEEEECHH
T ss_pred CCCcEEEEEEEECCCCCCCC------------Cc-eEEccCCCCCCceEEEEeccc--cC-CCCCCCC-ceEEEEEECCc
Confidence 88899999999998753100 11 2222221 1 111 121111 12 111 222 46666665422
Q ss_pred ------CCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 209 ------DPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 209 ------~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
+....+++|++++.++++|+++++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g 402 (477)
T 3nks_A 373 WLQTLEASGCVLSQELFQQRAQEAAATQLG 402 (477)
T ss_dssp HHHHHHHSSCCCCHHHHHHHHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHhC
Confidence 122357999999999999999874
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.49 E-value=4.5e-13 Score=120.62 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=133.9
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHhc----------------------CCcc----ceeeecCCCCcccchHHHH
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT----------------------KTEA----SLLRMLKGSPDVYLSGPIR 54 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~----------------------~~~~----~~~g~~~g~~~~~l~~~l~ 54 (234)
+|+|++......+++++|+.+++..+..+.. ...+ ....+++|+++ .|+++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~ 245 (478)
T 2ivd_A 167 LLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQ-VLIDALA 245 (478)
T ss_dssp THHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTH-HHHHHHH
T ss_pred HHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHH-HHHHHHH
Confidence 4678888888889999999886655443210 0112 34667888886 6889998
Q ss_pred HHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCC
Q 026733 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALV 134 (234)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~ 134 (234)
+.+ |++|++|++|++|..++ + + +.|.+.+..+|+.+.||.||+|+|+..+.+|+|.. +....+.+.+++
T Consensus 246 ~~l---g~~i~~~~~V~~i~~~~---~--~-~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l--~~~~~~~l~~~~ 314 (478)
T 2ivd_A 246 ASL---GDAAHVGARVEGLARED---G--G-WRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL--DDALAALVAGIA 314 (478)
T ss_dssp HHH---GGGEESSEEEEEEECC-------C-CEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT--CHHHHHHHHTCC
T ss_pred HHh---hhhEEcCCEEEEEEecC---C--e-EEEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc--CHHHHHHHhcCC
Confidence 887 78999999999999876 3 3 45655211267789999999999999988888742 223456678888
Q ss_pred CCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcc--cccC---CCCcc-hhhhcccCCccccccCCCceEEEEEeeCC
Q 026733 135 GVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNL--LYTP---DADFS-CFADLALTSPEDYYREGQGSLLQCVLTPG 208 (234)
Q Consensus 135 ~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~--~~~~---~~~~~-~~~~~~~~~p~~~~~~g~~~~~~~~~~~~ 208 (234)
+.+++.+++.+++++.+. .+.+ +... .+... ++.. ...| ...|++ ..++.+++...
T Consensus 315 ~~~~~~v~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~s--~~~~-~~~p~g-~~~l~~~~~~~ 376 (478)
T 2ivd_A 315 YAPIAVVHLGFDAGTLPA--------------PDGFGFLVPAEEQRRMLGAIHAS--TTFP-FRAEGG-RVLYSCMVGGA 376 (478)
T ss_dssp BCCEEEEEEEECTTSSCC--------------CCSSEEECCGGGCCSCCEEEEHH--HHCG-GGBSTT-CEEEEEEEECT
T ss_pred CCcEEEEEEEEccccCCC--------------CCceEEEecCCCCCceEEEEEEc--ccCC-CcCCCC-CEEEEEEeCCc
Confidence 889999999999875310 0111 1111 11111 1111 1123 234444 45666655433
Q ss_pred --CCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 209 --DPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 209 --~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
+.+..++++++.+.++++|++++|.
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~l~~~~~~ 403 (478)
T 2ivd_A 377 RQPGLVEQDEDALAALAREELKALAGV 403 (478)
T ss_dssp TCGGGGGSCHHHHHHHHHHHHHHHHCC
T ss_pred CCccccCCCHHHHHHHHHHHHHHHhCC
Confidence 3456789999999999999999874
No 6
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.49 E-value=2.2e-13 Score=121.83 Aligned_cols=204 Identities=14% Similarity=0.154 Sum_probs=134.0
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHhc-------C---------------CccceeeecCCCCcccchHHHHHHHH
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-------K---------------TEASLLRMLKGSPDVYLSGPIRKYIT 58 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~-------~---------------~~~~~~g~~~g~~~~~l~~~l~~~l~ 58 (234)
+|+|++.+....+++++|+...+..+..+.. . .....+..+++++. .+++.|++.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~l~~~l~ 246 (470)
T 3i6d_A 168 LIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQ-TLVEEIEKQLK 246 (470)
T ss_dssp THHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTCTH-HHHHHHHHTCC
T ss_pred hccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHH-HHHHHHHHhcC
Confidence 5789998999999999999886654421110 0 00224556778876 57888877765
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcE
Q 026733 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPV 138 (234)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~ 138 (234)
+ ++|++|++|++|..+++ + +.|.+ .+|+.+.||+||+|+|+..+.+|++.. +..+.+.++.+.++
T Consensus 247 ~--~~i~~~~~V~~i~~~~~--~----~~v~~---~~g~~~~ad~vi~a~p~~~~~~l~~~~----~~~~~~~~~~~~~~ 311 (470)
T 3i6d_A 247 L--TKVYKGTKVTKLSHSGS--C----YSLEL---DNGVTLDADSVIVTAPHKAAAGMLSEL----PAISHLKNMHSTSV 311 (470)
T ss_dssp S--EEEECSCCEEEEEECSS--S----EEEEE---SSSCEEEESEEEECSCHHHHHHHTTTS----TTHHHHHTCEEEEE
T ss_pred C--CEEEeCCceEEEEEcCC--e----EEEEE---CCCCEEECCEEEECCCHHHHHHHcCCc----hhhHHHhcCCCCce
Confidence 5 89999999999998863 3 45665 478789999999999999999998753 23466788888899
Q ss_pred EEEEEEecCccchhhhhHHHHHhhhhcCCCcccccCCCCcchhhh-c-ccCCccccccCCCceEEEEEeeC--CCCCCCC
Q 026733 139 VTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFAD-L-ALTSPEDYYREGQGSLLQCVLTP--GDPYMPL 214 (234)
Q Consensus 139 ~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~-~~~~p~~~~~~g~~~~~~~~~~~--~~~~~~~ 214 (234)
..+++.|+++..+.. . ....++...+....+... + +...+ ...|++ ..++.+++.. ++.+..+
T Consensus 312 ~~v~l~~~~~~~~~~-------~----~~~g~l~~~~~~~~~~~~~~~s~~~~-~~~p~~-~~~l~~~~~~~~~~~~~~~ 378 (470)
T 3i6d_A 312 ANVALGFPEGSVQME-------H----EGTGFVISRNSDFAITACTWTNKKWP-HAAPEG-KTLLRAYVGKAGDESIVDL 378 (470)
T ss_dssp EEEEEEESSTTCCCS-------S----CSSEEEECSTTCCSEEEEEEHHHHCG-GGSCTT-CEEEEEEECCSSCCGGGTS
T ss_pred EEEEEEECchhcCCC-------C----CCeEEEccCCCCCCceEEEEEcCcCC-CcCCCC-CEEEEEEECCCCCccccCC
Confidence 999999999764100 0 011222232222111100 0 11112 234444 4566665542 2346688
Q ss_pred CHHHHHHHHHHHHHhhCCC
Q 026733 215 PNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 215 ~~eei~~~~l~~L~~~~P~ 233 (234)
+++++++.++++|++++|.
T Consensus 379 ~~~~~~~~~~~~l~~~~g~ 397 (470)
T 3i6d_A 379 SDNDIINIVLEDLKKVMNI 397 (470)
T ss_dssp CHHHHHHHHHHHHGGGSCC
T ss_pred CHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999874
No 7
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.49 E-value=2.9e-13 Score=123.57 Aligned_cols=202 Identities=12% Similarity=0.015 Sum_probs=130.8
Q ss_pred chHHHHHcCCCCcccccHHHHHHHHHHH------hcCCccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEe
Q 026733 2 WDPVAYALGFIDCDNISARCMLTIFALF------ATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (234)
Q Consensus 2 w~pl~~~~~~~~~~~~SA~~~~~~l~~~------~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (234)
|+|++....+.+++++|+.+++..++.. .....+....++.|+++ .++++|++.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (520)
T 1s3e_A 165 ATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSG-QVSERIMDLL---GDRVKLERPVIYIDQ 240 (520)
T ss_dssp HHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTH-HHHHHHHHHH---GGGEESSCCEEEEEC
T ss_pred HHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHH-HHHHHHHHHc---CCcEEcCCeeEEEEE
Confidence 5677767778899999999987665421 11122334566788886 6888888765 889999999999998
Q ss_pred ccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCccchhhhh
Q 026733 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (234)
Q Consensus 76 ~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~ 155 (234)
++ + ++. |.+ .+|+.+.||+||+|+|+..+.+++.+...+....+.++++.+.+++.+++.|++++.+..
T Consensus 241 ~~---~--~v~-v~~---~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-- 309 (520)
T 1s3e_A 241 TR---E--NVL-VET---LNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK-- 309 (520)
T ss_dssp SS---S--SEE-EEE---TTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGG--
T ss_pred CC---C--eEE-EEE---CCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCC--
Confidence 76 3 444 666 478889999999999999888875221122234456778887799999999998753100
Q ss_pred HHHHHhhhhcCCCcccccCCCCcchhhhcccCCccccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 156 ERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~--~~~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
.+....+..+...++...+. + ..+++...++..++. .++.|..+++|++.+.++++|+++||.
T Consensus 310 ----------~~~g~~~~~~~~~~~~~~~d---~--~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~ 374 (520)
T 1s3e_A 310 ----------DYCGTMIIDGEEAPVAYTLD---D--TKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGS 374 (520)
T ss_dssp ----------TEEEEEEECSTTCSCSEEEE---C--CCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTC
T ss_pred ----------CCCceeeccCCCCceEEEee---C--CCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCc
Confidence 11111111111111111111 1 112222234444443 235677889999999999999999873
No 8
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.45 E-value=7.4e-13 Score=120.28 Aligned_cols=202 Identities=12% Similarity=0.141 Sum_probs=136.1
Q ss_pred CchHHHHHcCCCCcccccHHH---------HHHHHHHHhcCCc------cceeeec-CCCCcccchHHHHHHHHHCCcEE
Q 026733 1 MWDPVAYALGFIDCDNISARC---------MLTIFALFATKTE------ASLLRML-KGSPDVYLSGPIRKYITDKGGRF 64 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~---------~~~~l~~~~~~~~------~~~~g~~-~g~~~~~l~~~l~~~l~~~Gg~i 64 (234)
|++|++......+++++|+.+ +..+++....... ...+.|+ +|+++ .++++|++.+.+. +|
T Consensus 155 ~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~-~l~~~la~~l~~~--~i 231 (484)
T 4dsg_A 155 FMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTG-IIYQAIKEKLPSE--KL 231 (484)
T ss_dssp CCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTH-HHHHHHHHHSCGG--GE
T ss_pred HHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHH-HHHHHHHhhhhhC--eE
Confidence 578998888899999999975 2333443322211 2246666 47886 6899999987653 89
Q ss_pred EcC--ceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCC-cc-cCchHHHHhhcCCCCcEEE
Q 026733 65 HLR--WGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPS-SW-REMKFFNNIYALVGVPVVT 140 (234)
Q Consensus 65 ~~~--~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~-~~-~~~~~~~~~~~l~~~~~~~ 140 (234)
+++ ++|++|..++ + + |.+ .+|+.+.||+||+|+|++.+.++++. .. .+....+.+.++++.++..
T Consensus 232 ~~~~~~~V~~I~~~~---~--~---v~~---~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~ 300 (484)
T 4dsg_A 232 TFNSGFQAIAIDADA---K--T---ITF---SNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNV 300 (484)
T ss_dssp EECGGGCEEEEETTT---T--E---EEE---TTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEE
T ss_pred EECCCceeEEEEecC---C--E---EEE---CCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEE
Confidence 999 5699999876 3 2 445 47888999999999999998888753 11 1223455678899999999
Q ss_pred EEEEecCccchhhhhHHHHHhhhhcCCCcccccCCCCc--chhhhcccCCccccccCCCceEEEEEeeCCCCCCCCCHHH
Q 026733 141 VQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADF--SCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDE 218 (234)
Q Consensus 141 v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~ee 218 (234)
|++.|+++..+ .+ ...++++.+++.. .....++..+| ..+|+| ++++.+.++.. ..+.++||+
T Consensus 301 v~l~~~~~~~~--------~~----~~~~~i~vp~~~~~~~ri~~~s~~~p-~~ap~g-~~~l~~e~~~~-~~~~~~d~~ 365 (484)
T 4dsg_A 301 IGIGVKGTPPP--------HL----KTACWLYFPEDTSPFYRATVFSNYSK-YNVPEG-HWSLMLEVSES-KYKPVNHST 365 (484)
T ss_dssp EEEEEESCCCG--------GG----TTCCEEECCSTTCSCSEEECGGGTCG-GGSCTT-EEEEEEEEEEB-TTBCCCTTS
T ss_pred EEEEEcCCCcc--------cC----CCCeEEEEEcCCCeEEEEEeecCCCc-ccCCCC-eEEEEEEEecC-cCCcCCHHH
Confidence 99999986421 01 1235555444322 22223344456 356666 45555544443 455789999
Q ss_pred HHHHHHHHHHhhC
Q 026733 219 IIRRVAKQLYFHH 231 (234)
Q Consensus 219 i~~~~l~~L~~~~ 231 (234)
|++.++++|.++.
T Consensus 366 l~~~a~~~L~~~~ 378 (484)
T 4dsg_A 366 LIEDCIVGCLASN 378 (484)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999874
No 9
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.44 E-value=4.4e-13 Score=121.43 Aligned_cols=203 Identities=11% Similarity=0.125 Sum_probs=130.0
Q ss_pred CchHHHHHcCCCCcccccHHHHHH---------HHHH-HhcCCc-----ccee-eecCCCCcccchHHHHHHHHHCCcEE
Q 026733 1 MWDPVAYALGFIDCDNISARCMLT---------IFAL-FATKTE-----ASLL-RMLKGSPDVYLSGPIRKYITDKGGRF 64 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~---------~l~~-~~~~~~-----~~~~-g~~~g~~~~~l~~~l~~~l~~~Gg~i 64 (234)
+++|++......+++++|+.++.. .+.. +..... ...+ ..++|++. .++++|++.|++.|++|
T Consensus 161 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~i 239 (513)
T 4gde_A 161 FMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTG-GIWIAVANTLPKEKTRF 239 (513)
T ss_dssp THHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHH-HHHHHHHHTSCGGGEEE
T ss_pred hcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHH-HHHHHHHHHHHhcCeee
Confidence 467887777788888888876432 1121 111111 1123 33478886 69999999999999999
Q ss_pred EcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEE
Q 026733 65 HLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLR 144 (234)
Q Consensus 65 ~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~ 144 (234)
++|++|++|..++ + + |.+ .+|+.+.||+||+|+|++.+.++++.. ........+++.++.+|.|.
T Consensus 240 ~~~~~V~~I~~~~---~--~---v~~---~~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~~~~~~l~y~~~~~v~l~ 304 (513)
T 4gde_A 240 GEKGKVTKVNANN---K--T---VTL---QDGTTIGYKKLVSTMAVDFLAEAMNDQ----ELVGLTKQLFYSSTHVIGVG 304 (513)
T ss_dssp SGGGCEEEEETTT---T--E---EEE---TTSCEEEEEEEEECSCHHHHHHHTTCH----HHHHHHTTCCEEEEEEEEEE
T ss_pred ecceEEEEEEccC---C--E---EEE---cCCCEEECCEEEECCCHHHHHHhcCch----hhHhhhhcccCCceEEEEEE
Confidence 9999999999886 3 3 445 489999999999999999999988752 23445678888899999999
Q ss_pred ecCccchhhhhHHHHHhhhhcCCCcccccCCCCcch--hhhcccCCccccccCCCce---------------------EE
Q 026733 145 YNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSC--FADLALTSPEDYYREGQGS---------------------LL 201 (234)
Q Consensus 145 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~g~~~---------------------~~ 201 (234)
++++.... . ...+|++.+++...+ ...+++.+| ...|++..+ +.
T Consensus 305 ~~~~~~~~--------~----~~~~~~y~~~~~~~f~Ri~~~~n~sp-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (513)
T 4gde_A 305 VRGSRPER--------I----GDKCWLYFPEDNCPFYRATIFSNYSP-YNQPEASAALPTMQLADGSRPQSTEAKEGPYW 371 (513)
T ss_dssp EESSCCTT--------T----TTCCEEECCSTTCSCSEEECGGGTCG-GGSCCTTCCEECCEETTSCCCSCCSEECCCEE
T ss_pred Eecccccc--------c----cccceeeccCCCCceeEEEecCCCCc-ccCCCCCceEEEEEeccCCCcccccCCcceEE
Confidence 98753210 0 122444433332211 111111122 122222111 11
Q ss_pred EEEe-eCCCCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 202 QCVL-TPGDPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 202 ~~~~-~~~~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
..+. ...+.++.+++|+|++.++++|.++.+
T Consensus 372 ~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~ 403 (513)
T 4gde_A 372 SIMLEVSESSMKPVNQETILADCIQGLVNTEM 403 (513)
T ss_dssp EEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTS
T ss_pred EEEecccchhccCCCHHHHHHHHHHHHHHhcC
Confidence 1111 123567789999999999999998753
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.42 E-value=5.1e-13 Score=120.31 Aligned_cols=197 Identities=13% Similarity=0.117 Sum_probs=132.4
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHh-----------cCC--------------ccceeeecCCCCcccchHHHHH
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFA-----------TKT--------------EASLLRMLKGSPDVYLSGPIRK 55 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~-----------~~~--------------~~~~~g~~~g~~~~~l~~~l~~ 55 (234)
+|+|++.+..+.+++++|+.+++..+..+. ... .+..+.+++|+++ .++++|++
T Consensus 166 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~l~~~l~~ 244 (475)
T 3lov_A 166 LIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLE-SLIERLEE 244 (475)
T ss_dssp THHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHH-HHHHHHHH
T ss_pred HHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHH-HHHHHHHh
Confidence 688999999999999999986555443211 001 1235677888886 58888888
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCC
Q 026733 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVG 135 (234)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~ 135 (234)
.+.+ ++|++|++|++|..++ + + +.|.+ .+| .+.||+||+|+|+..+.+|++... . +.+.++++
T Consensus 245 ~l~~--~~i~~~~~V~~i~~~~---~--~-~~v~~---~~g-~~~ad~vV~a~p~~~~~~ll~~~~----~-~~~~~~~~ 307 (475)
T 3lov_A 245 VLER--SEIRLETPLLAISRED---G--R-YRLKT---DHG-PEYADYVLLTIPHPQVVQLLPDAH----L-PELEQLTT 307 (475)
T ss_dssp HCSS--CEEESSCCCCEEEEET---T--E-EEEEC---TTC-CEEESEEEECSCHHHHHHHCTTSC----C-HHHHTCCE
T ss_pred hccC--CEEEcCCeeeEEEEeC---C--E-EEEEE---CCC-eEECCEEEECCCHHHHHHHcCccC----H-HHHhcCCC
Confidence 7765 8999999999999886 3 3 34554 367 789999999999999999987531 1 56778888
Q ss_pred CcEEEEEEEecCccchhhhhHHHHHhhhhcCCC--cccccCCCCcchhhh-c-ccCCccccccCCCceEEEEEee--CCC
Q 026733 136 VPVVTVQLRYNGWVTELQDLERSRQLRRALGLD--NLLYTPDADFSCFAD-L-ALTSPEDYYREGQGSLLQCVLT--PGD 209 (234)
Q Consensus 136 ~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-~-~~~~p~~~~~~g~~~~~~~~~~--~~~ 209 (234)
.++.++++.|++++. . +.+ .++..+.....+... + +...+ ...|+ ..++.+++. .++
T Consensus 308 ~~~~~v~l~~~~~~~-~-------------~~~g~g~l~~~~~~~~~~~~~~~s~~~~-~~~p~--~~~l~~~~~~~~~~ 370 (475)
T 3lov_A 308 HSTATVTMIFDQQQS-L-------------PIEGTGFVVNRRAPYSITACTAIDQKWN-HSAPD--HTVLRAFVGRPGND 370 (475)
T ss_dssp EEEEEEEEEEECCSS-C-------------SSSSSEEEECTTSSCSEEEEEEHHHHCT-TTCTT--EEEEEEEECBTTBC
T ss_pred CeEEEEEEEECCcCC-C-------------CCCCEEEEecCCCCCceEEEEEEcccCC-CCCCC--cEEEEEEeCCCCCC
Confidence 899999999999752 1 112 233333322211100 0 11112 12222 345555553 224
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCC
Q 026733 210 PYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 210 ~~~~~~~eei~~~~l~~L~~~~P 232 (234)
.+..+++|++.+.++++|++++|
T Consensus 371 ~~~~~~~e~~~~~~~~~L~~~~g 393 (475)
T 3lov_A 371 HLVHESDEVLQQAVLQDLEKICG 393 (475)
T ss_dssp GGGGSCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCHHHHHHHHHHHHHHHhC
Confidence 56678999999999999999985
No 11
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.37 E-value=5.3e-12 Score=114.29 Aligned_cols=198 Identities=12% Similarity=0.062 Sum_probs=128.5
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHhcCC----ccceeeecCCCCcccchHHHHHHHHHCC-cEEEcCceeeEEEe
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKT----EASLLRMLKGSPDVYLSGPIRKYITDKG-GRFHLRWGCREILY 75 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~~~----~~~~~g~~~g~~~~~l~~~l~~~l~~~G-g~i~~~~~V~~i~~ 75 (234)
+|+|++....+.+++++|+..++..+......- .......++|+++ .++++|++.+++.| ++|++|++|++|..
T Consensus 206 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~~i~~~~~V~~i~~ 284 (495)
T 2vvm_A 206 SLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQS-AFARRFWEEAAGTGRLGYVFGCPVRSVVN 284 (495)
T ss_dssp HHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHH-HHHHHHHHHHHTTTCEEEESSCCEEEEEE
T ss_pred HHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHH-HHHHHHHHHhhhcCceEEEeCCEEEEEEE
Confidence 367787777888999999998776554321110 0112334677876 69999999999999 99999999999998
Q ss_pred ccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCccchhhhh
Q 026733 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (234)
Q Consensus 76 ~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~ 155 (234)
++ + + +.|.+ .+|+.+.||+||+|+|+..+.+++-....+....+.++++.+.++..|+|.|+++...
T Consensus 285 ~~---~--~-v~v~~---~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~---- 351 (495)
T 2vvm_A 285 ER---D--A-ARVTA---RDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMR---- 351 (495)
T ss_dssp CS---S--S-EEEEE---TTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGG----
T ss_pred cC---C--E-EEEEE---CCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCC----
Confidence 76 2 2 34655 4777899999999999998888741111222344567778888999999999986531
Q ss_pred HHHHHhhhhcCCCcccccCCCCcchhhhcccCCccccccCCCceEEEEEeeCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 156 ERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
.+..+.....+...++.+ ...|++ ..++..++..... +++++..+.++++|++++|+
T Consensus 352 ----------~~~g~~~~~~~~~~~~~~-------~~~~~~-~~vl~~~~~~~~~---~~~~e~~~~~~~~L~~~~~~ 408 (495)
T 2vvm_A 352 ----------SWTGIAYPFNKLCYAIGD-------GTTPAG-NTHLVCFGNSANH---IQPDEDVRETLKAVGQLAPG 408 (495)
T ss_dssp ----------GEEEEECSSCSSCEEEEE-------EECTTS-CEEEEEEECSTTC---CCTTTCHHHHHHHHHTTSTT
T ss_pred ----------CceeEecCCCCcEEEecC-------CCCCCC-CeEEEEEeCcccc---CCCHHHHHHHHHHHHHhcCC
Confidence 111111111222112211 012333 3444444432222 46677788999999999885
No 12
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.37 E-value=1.1e-12 Score=117.31 Aligned_cols=198 Identities=13% Similarity=0.022 Sum_probs=125.1
Q ss_pred chHHHHHcCCCCcc-cccHHHHHHHHHHHhc-----CCccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEe
Q 026733 2 WDPVAYALGFIDCD-NISARCMLTIFALFAT-----KTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY 75 (234)
Q Consensus 2 w~pl~~~~~~~~~~-~~SA~~~~~~l~~~~~-----~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (234)
|+|++....+.+++ ++|+.+++..+..... ...+....++.|+++ .+++.|++.+ |++|++|++|++|..
T Consensus 165 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~-~l~~~l~~~l---g~~i~~~~~V~~i~~ 240 (453)
T 2yg5_A 165 IGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQ-QVSIRMAEAL---GDDVFLNAPVRTVKW 240 (453)
T ss_dssp HHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTH-HHHHHHHHHH---GGGEECSCCEEEEEE
T ss_pred HHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChH-HHHHHHHHhc---CCcEEcCCceEEEEE
Confidence 45665555677888 9999987765543210 011223456788886 6888888765 899999999999998
Q ss_pred ccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCccchhhhh
Q 026733 76 DKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDL 155 (234)
Q Consensus 76 ~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~ 155 (234)
++ + +.+.|. .+|+.+.||+||+|+|+..+.+|+.....+....+.++++.+.+++.+++.|++++.+..
T Consensus 241 ~~---~--~~v~v~----~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-- 309 (453)
T 2yg5_A 241 NE---S--GATVLA----DGDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRED-- 309 (453)
T ss_dssp ET---T--EEEEEE----TTTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGG--
T ss_pred eC---C--ceEEEE----ECCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCC--
Confidence 76 3 323343 277889999999999999888876321122233455677776788999999998753100
Q ss_pred HHHHHhhhhcCCCcccccCC-CCcchhhhcccCCccccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 156 ERSRQLRRALGLDNLLYTPD-ADFSCFADLALTSPEDYYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 156 ~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~--~~~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
......+..+ +...++ . + ..++++..++..++. .++.|..+++|++.+.++++|+++||
T Consensus 310 ----------~~~g~~~~~~~~~~~~~---~---~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~ 371 (453)
T 2yg5_A 310 ----------GLSGTGFGASEVVQEVY---D---N--TNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLG 371 (453)
T ss_dssp ----------TEEEEEECTTSSSCEEE---E---C--CCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred ----------CCCceeecCCCCeEEEE---e---C--CCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhC
Confidence 1111111222 211111 1 1 122222344444443 23456678899999999999999886
No 13
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.33 E-value=3.9e-12 Score=115.31 Aligned_cols=203 Identities=14% Similarity=0.073 Sum_probs=126.8
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHH---------------hcCC---------------ccceeeecCCCCcccch
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALF---------------ATKT---------------EASLLRMLKGSPDVYLS 50 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~---------------~~~~---------------~~~~~g~~~g~~~~~l~ 50 (234)
+|+|++......+++++|+.+++..+..+ .... ......+++|+++ .|+
T Consensus 168 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~-~l~ 246 (504)
T 1sez_A 168 LIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQ-TLT 246 (504)
T ss_dssp THHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTH-HHH
T ss_pred HHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHH-HHH
Confidence 57888888888899999998754333221 1100 0113566788886 588
Q ss_pred HHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcce----EEEEEEeecCCC---eEEecCEEEEcCChhhHhhhCCC---
Q 026733 51 GPIRKYITDKG-GRFHLRWGCREILYDKAANAETY----VKGLAMSKATDK---KVVQADAYVAACDVPGIKRLLPS--- 119 (234)
Q Consensus 51 ~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~----~~~v~~~~~~~g---~~~~aD~VV~a~~~~~~~~Ll~~--- 119 (234)
++|++.+ | ++|++|++|++|..+++ + . .+.|.+.+ .+| +.+.||+||+|+|+..+.+++..
T Consensus 247 ~~l~~~l---~~~~i~~~~~V~~I~~~~~--~--~~~~~~~~v~~~~-~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~ 318 (504)
T 1sez_A 247 DAICKDL---REDELRLNSRVLELSCSCT--E--DSAIDSWSIISAS-PHKRQSEEESFDAVIMTAPLCDVKSMKIAKRG 318 (504)
T ss_dssp HHHHTTS---CTTTEETTCCEEEEEEECS--S--SSSSCEEEEEEBC-SSSSCBCCCEESEEEECSCHHHHHTSEEESSS
T ss_pred HHHHhhc---ccceEEcCCeEEEEEecCC--C--CcccceEEEEEcC-CCCccceeEECCEEEECCCHHHHHHHhhcccC
Confidence 8887754 5 79999999999998863 2 1 25666642 245 57889999999999999888731
Q ss_pred cccCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCC--cccccCC------CCcc-hhhhcccCCcc
Q 026733 120 SWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLD--NLLYTPD------ADFS-CFADLALTSPE 190 (234)
Q Consensus 120 ~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~------~~~~-~~~~~~~~~p~ 190 (234)
.+... ..+.++.+.++..|+|.|+++..+. ..+ ++++... .... ++. +...|
T Consensus 319 ~~~~~---~~l~~~~~~~~~~v~l~~~~~~~~~-------------~~~~~~~l~~~~~~~~g~~~~~~~~~--s~~~~- 379 (504)
T 1sez_A 319 NPFLL---NFIPEVDYVPLSVVITTFKRENVKY-------------PLEGFGVLVPSKEQQHGLKTLGTLFS--SMMFP- 379 (504)
T ss_dssp SBCCC---TTSCCCCEEEEEEEEEEEEGGGBSS-------------CCCSSEEECCGGGGGGTCCSSEEEEH--HHHCG-
T ss_pred CcccH---HHHhcCCCCceEEEEEEEchhhcCC-------------CCCceEEEcCCCCCCCCCccceEEee--ccccC-
Confidence 11111 1255666678999999999865310 011 1111110 0111 111 11223
Q ss_pred ccccCCCceEEEEEeeC--CCCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 191 DYYREGQGSLLQCVLTP--GDPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 191 ~~~~~g~~~~~~~~~~~--~~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
..+|++ ..++..++.. +..|..+++|++++.++++|++++|
T Consensus 380 ~~~p~g-~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g 422 (504)
T 1sez_A 380 DRAPNN-VYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLG 422 (504)
T ss_dssp GGSCTT-EEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHC
T ss_pred CcCCCC-CEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhC
Confidence 234544 4555555542 2367788999999999999999986
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.20 E-value=2.3e-11 Score=109.66 Aligned_cols=167 Identities=14% Similarity=0.111 Sum_probs=108.0
Q ss_pred eecCCCCcccchHHHHHHHHHC--------CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 39 RMLKGSPDVYLSGPIRKYITDK--------GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 39 g~~~g~~~~~l~~~l~~~l~~~--------Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
...+|+++ .+++.|++.+.+. |++|++|++|++|..++ + +++ |.+ .+|+.+.||+||+|+|+
T Consensus 199 ~~~~gG~~-~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~---~--~v~-v~~---~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 199 VADQRGYE-AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP---G--GVT-VKT---EDNSVYSADYVMVSASL 268 (472)
T ss_dssp ECCTTCTT-HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS---S--CEE-EEE---TTSCEEEESEEEECSCH
T ss_pred eecCCcHH-HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC---C--cEE-EEE---CCCCEEEcCEEEEecCH
Confidence 33467886 6889999888776 78999999999999886 3 444 666 47888999999999999
Q ss_pred hhHhhhCCC-c-ccCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccccCCC--Ccchhhhccc
Q 026733 111 PGIKRLLPS-S-WREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDA--DFSCFADLAL 186 (234)
Q Consensus 111 ~~~~~Ll~~-~-~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~ 186 (234)
..+.+++.. . ..+....+.+.++...+++.|+|.|++++.+.. . ....+++.... ....+..
T Consensus 269 ~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~-------~----~~~~~~~~~~~~~~~~~~~~--- 334 (472)
T 1b37_A 269 GVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG-------K----GREFFLYASSRRGYYGVWQE--- 334 (472)
T ss_dssp HHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCS-------T----TCSEEEECCSSTTSSCEEEE---
T ss_pred HHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCC-------C----CcceEEecccCCccceeeec---
Confidence 988875431 1 122234556777776788899999999764110 0 01111211111 1111211
Q ss_pred CCccccccCCCceEEEEEeeCC--CCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 187 TSPEDYYREGQGSLLQCVLTPG--DPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 187 ~~p~~~~~~g~~~~~~~~~~~~--~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
.++ ..|+ +.++.+++... +.|..+++|++++.++++|++++|+
T Consensus 335 ~~~--~~p~--~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg 379 (472)
T 1b37_A 335 FEK--QYPD--ANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPG 379 (472)
T ss_dssp CTT--TSTT--CCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTT
T ss_pred ccC--CCCC--CCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCC
Confidence 122 1232 23444444322 2466779999999999999999985
No 15
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.16 E-value=8.9e-11 Score=106.02 Aligned_cols=167 Identities=12% Similarity=0.057 Sum_probs=107.7
Q ss_pred eeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC---eEEecCEEEEcCChhhH
Q 026733 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK---KVVQADAYVAACDVPGI 113 (234)
Q Consensus 37 ~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g---~~~~aD~VV~a~~~~~~ 113 (234)
.+..++|+++ .|+++|++.+.+ ++|++|++|++|..++ + ++. |.+. +| +.+.||+||+|+|+..+
T Consensus 230 ~~~~~~gG~~-~l~~~l~~~l~~--~~i~~~~~V~~i~~~~---~--~v~-v~~~---~g~~~~~~~ad~vI~a~p~~~l 297 (489)
T 2jae_A 230 MMFTPVGGMD-RIYYAFQDRIGT--DNIVFGAEVTSMKNVS---E--GVT-VEYT---AGGSKKSITADYAICTIPPHLV 297 (489)
T ss_dssp SEEEETTCTT-HHHHHHHHHHCG--GGEETTCEEEEEEEET---T--EEE-EEEE---ETTEEEEEEESEEEECSCHHHH
T ss_pred cEEeecCCHH-HHHHHHHHhcCC--CeEEECCEEEEEEEcC---C--eEE-EEEe---cCCeEEEEECCEEEECCCHHHH
Confidence 4566788886 699999988754 7899999999999886 3 443 5553 44 67899999999999988
Q ss_pred hhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccccCCCCcchhhhcccCCccccc
Q 026733 114 KRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYY 193 (234)
Q Consensus 114 ~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 193 (234)
.+++.. .+....+.+.++.+.+++.|+|.|++++.+. .. . ....+.....+...++. ++...
T Consensus 298 ~~l~~~--l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~-------~~-~--~~g~~~~~~~~~~~~~~------~s~~~ 359 (489)
T 2jae_A 298 GRLQNN--LPGDVLTALKAAKPSSSGKLGIEYSRRWWET-------ED-R--IYGGASNTDKDISQIMF------PYDHY 359 (489)
T ss_dssp TTSEEC--CCHHHHHHHHTEECCCEEEEEEEESSCHHHH-------TT-C--CCSCEEEESSTTCEEEC------CSSST
T ss_pred HhCccC--CCHHHHHHHHhCCCccceEEEEEeCCCCccC-------CC-C--cccccccCCCCceEEEe------CCCCC
Confidence 887642 2223455677888889999999999875310 00 0 11111111122111110 10011
Q ss_pred cCCCceEEEEEeeC--CCCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 194 REGQGSLLQCVLTP--GDPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 194 ~~g~~~~~~~~~~~--~~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
+.+.+.++..++.. +..|..+++|++.+.++++|++++|.
T Consensus 360 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~~L~~~~~~ 401 (489)
T 2jae_A 360 NSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIAEGSEIHGE 401 (489)
T ss_dssp TSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHHHHHHHHCG
T ss_pred CCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHHHHHHHcCc
Confidence 11123444444432 23566789999999999999999874
No 16
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.14 E-value=5.1e-10 Score=96.46 Aligned_cols=163 Identities=16% Similarity=0.022 Sum_probs=103.5
Q ss_pred CCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcc
Q 026733 42 KGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSW 121 (234)
Q Consensus 42 ~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~ 121 (234)
.+++. .+.+.+++.+ |++|+++++|++|..+++ + +.|.+ .+|+.+.||.||+|+|++.+.+|+++..
T Consensus 108 ~~g~~-~l~~~l~~~~---g~~i~~~~~V~~i~~~~~--~----~~v~~---~~g~~~~ad~vV~A~p~~~~~~ll~~~~ 174 (342)
T 3qj4_A 108 PQGIS-SIIKHYLKES---GAEVYFRHRVTQINLRDD--K----WEVSK---QTGSPEQFDLIVLTMPVPEILQLQGDIT 174 (342)
T ss_dssp TTCTT-HHHHHHHHHH---TCEEESSCCEEEEEECSS--S----EEEEE---SSSCCEEESEEEECSCHHHHTTCBSTHH
T ss_pred CCCHH-HHHHHHHHhc---CCEEEeCCEEEEEEEcCC--E----EEEEE---CCCCEEEcCEEEECCCHHHHHHHhcccc
Confidence 44443 5666666654 999999999999998763 3 34655 3677789999999999999999987521
Q ss_pred --cCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccccCCCCc-chhhhcccCCccccccCCCc
Q 026733 122 --REMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADF-SCFADLALTSPEDYYREGQG 198 (234)
Q Consensus 122 --~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~g~~ 198 (234)
.+....+.+.++++.++.+|+|.|+++.. +.. +...++...++.. +++.+.+...+ ..+++ +
T Consensus 175 ~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~----------~~~--~~~g~~~~~~~~~~~~~~~~~k~~r--~~~~~-~ 239 (342)
T 3qj4_A 175 TLISECQRQQLEAVSYSSRYALGLFYEAGTK----------IDV--PWAGQYITSNPCIRFVSIDNKKRNI--ESSEI-G 239 (342)
T ss_dssp HHSCHHHHHHHHTCCBCCEEEEEEECSSCC------------CC--SCSEEECSSCSSEEEEEEHHHHTTC--CCC-C-C
T ss_pred cccCHHHHHHHhcCCccccEEEEEEECCCCc----------cCC--ceeeEEccCCcceEEEEccccCCCC--CCCCC-C
Confidence 12234567889999999999999997532 000 2233333333322 22211111110 00111 2
Q ss_pred eEEEEEeeC--CCCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 199 SLLQCVLTP--GDPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 199 ~~~~~~~~~--~~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
..+.+..+. ++.+.++++|++++.++++|++++|
T Consensus 240 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 275 (342)
T 3qj4_A 240 PSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILP 275 (342)
T ss_dssp CEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSC
T ss_pred ceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhcc
Confidence 233333332 2357788999999999999999986
No 17
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.93 E-value=1.2e-09 Score=98.77 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=71.3
Q ss_pred CcccccHHHHHHHHHHHh---cCCccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEe-ccCCCCcceEEEE
Q 026733 13 DCDNISARCMLTIFALFA---TKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILY-DKAANAETYVKGL 88 (234)
Q Consensus 13 ~~~~~SA~~~~~~l~~~~---~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~-~~~~~~~~~~~~v 88 (234)
++.+.||...+..+.+|. ....++.++|++|+++ .|+++|++.+++.||+|+++++|++|.. ++ | ++++|
T Consensus 220 ~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~-~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~---g--~v~gV 293 (475)
T 3p1w_A 220 DYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLG-GIPEGFSRMCAINGGTFMLNKNVVDFVFDDD---N--KVCGI 293 (475)
T ss_dssp GGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTT-HHHHHHHHHHHHC--CEESSCCEEEEEECTT---S--CEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHH-HHHHHHHHHHHHcCCEEEeCCeEEEEEEecC---C--eEEEE
Confidence 345678888777666543 1123568999999997 6999999999999999999999999999 54 5 79999
Q ss_pred EEeecCCCeEEecCEEEEcCChh
Q 026733 89 AMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 89 ~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
++ .+|+.+.||.||+|++..
T Consensus 294 ~~---~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 294 KS---SDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp EE---TTSCEEEEEEEEECGGGC
T ss_pred EE---CCCcEEECCEEEECCCcc
Confidence 88 478889999999998754
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.88 E-value=2.6e-08 Score=90.01 Aligned_cols=162 Identities=12% Similarity=0.065 Sum_probs=103.9
Q ss_pred eeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe----EEecCEEEEcCChhhH
Q 026733 38 LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDVPGI 113 (234)
Q Consensus 38 ~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~----~~~aD~VV~a~~~~~~ 113 (234)
+..+.|+++ .|+++|++.+.+ +|++|++|++|..++ + + +.|.+. +|+ .+.||+||+|+|+..+
T Consensus 233 ~~~~~gG~~-~l~~~l~~~l~~---~i~~~~~V~~I~~~~---~--~-v~v~~~---~~~~~~~~~~ad~vI~t~p~~~~ 299 (498)
T 2iid_A 233 FDEIVDGMD-KLPTAMYRDIQD---KVHFNAQVIKIQQND---Q--K-VTVVYE---TLSKETPSVTADYVIVCTTSRAV 299 (498)
T ss_dssp EEEETTCTT-HHHHHHHHHTGG---GEESSCEEEEEEECS---S--C-EEEEEE---CSSSCCCEEEESEEEECSCHHHH
T ss_pred eEEeCCcHH-HHHHHHHHhccc---ccccCCEEEEEEECC---C--e-EEEEEe---cCCcccceEEeCEEEECCChHHH
Confidence 445788886 689999988764 899999999999876 3 3 356554 333 5799999999999988
Q ss_pred hhhC--CCcccCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccccCCCCcchhhhcccCCccc
Q 026733 114 KRLL--PSSWREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPED 191 (234)
Q Consensus 114 ~~Ll--~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 191 (234)
.++. |. .+....+.++++.+.++..|+|.|++++.+.. . ......+...+...++ + ++.
T Consensus 300 ~~i~f~p~--Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~------~-----~~~~~~~~~~~~~~~~--~----~s~ 360 (498)
T 2iid_A 300 RLIKFNPP--LLPKKAHALRSVHYRSGTKIFLTCTTKFWEDD------G-----IHGGKSTTDLPSRFIY--Y----PNH 360 (498)
T ss_dssp TTSEEESC--CCHHHHHHHHHCCEECEEEEEEEESSCGGGGG------T-----CCSSEEEESSTTCEEE--C----CSS
T ss_pred hheecCCC--CCHHHHHHHHhCCCcceeEEEEEeCCCCccCC------C-----ccCCcccCCCCcceEE--E----CCC
Confidence 7753 32 22234556788887789999999999764100 0 0111111111111111 1 100
Q ss_pred cccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 192 YYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 192 ~~~~g~~~~~~~~~~--~~~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
..|++. .++..++. .+..|..+++|++.+.++++|+++++
T Consensus 361 ~~p~g~-~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g 402 (498)
T 2iid_A 361 NFTNGV-GVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQ 402 (498)
T ss_dssp CCTTSC-EEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCC-cEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcC
Confidence 134443 34443443 23467788999999999999999885
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.59 E-value=2.1e-06 Score=75.74 Aligned_cols=131 Identities=14% Similarity=0.051 Sum_probs=81.3
Q ss_pred HHHHHcCCCCcccccHHHHHHHHHHHhcCC----ccceeeecCCCCcccchHHHHHHH-HHCCcEEEcCceeeEEEeccC
Q 026733 4 PVAYALGFIDCDNISARCMLTIFALFATKT----EASLLRMLKGSPDVYLSGPIRKYI-TDKGGRFHLRWGCREILYDKA 78 (234)
Q Consensus 4 pl~~~~~~~~~~~~SA~~~~~~l~~~~~~~----~~~~~g~~~g~~~~~l~~~l~~~l-~~~Gg~i~~~~~V~~i~~~~~ 78 (234)
+++......+++++|+..++..+......- ..... .+.++++ .+.+.+ ++.| +|++|++|++|..+++
T Consensus 162 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~-----~l~~~~~~~~g-~i~~~~~V~~i~~~~~ 234 (431)
T 3k7m_X 162 AWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNGSA-----DLVDAMSQEIP-EIRLQTVVTGIDQSGD 234 (431)
T ss_dssp HHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTCTH-----HHHHHHHTTCS-CEESSCCEEEEECSSS
T ss_pred HHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCcHH-----HHHHHHHhhCC-ceEeCCEEEEEEEcCC
Confidence 344445667788899888776655321100 00011 2444443 333333 3455 9999999999998763
Q ss_pred CCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCccc
Q 026733 79 ANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (234)
Q Consensus 79 ~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~ 150 (234)
++ .|.+ .+|+.+.||+||+|+|+..++++.-....+....+.+..+.....+.|.+.|+.++.
T Consensus 235 -----~v-~v~~---~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~ 297 (431)
T 3k7m_X 235 -----VV-NVTV---KDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA 297 (431)
T ss_dssp -----SE-EEEE---TTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT
T ss_pred -----eE-EEEE---CCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc
Confidence 33 3655 477789999999999999888763111122223344566665677899999998653
No 20
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.55 E-value=2.7e-07 Score=86.78 Aligned_cols=160 Identities=11% Similarity=0.053 Sum_probs=96.5
Q ss_pred ecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCCCeEEecCEEEEcCChhhHhhh
Q 026733 40 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIKRL 116 (234)
Q Consensus 40 ~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~---~~~g~~~~aD~VV~a~~~~~~~~L 116 (234)
..+|+++ .|+++|++ |.+|++|++|++|..+++ + +.|.+.+ +++|+.+.||+||+|+|+..++++
T Consensus 395 ~~~gG~~-~l~~~La~-----~l~I~l~~~V~~I~~~~~--~----v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l 462 (662)
T 2z3y_A 395 TVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTAS--G----CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQ 462 (662)
T ss_dssp EETTCTT-HHHHHHTT-----TCEEETTEEEEEEEEETT--E----EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCS
T ss_pred eecCcHH-HHHHHHHh-----cCceecCCeEEEEEECCC--c----EEEEEeecccCCCCeEEEeCEEEECCCHHHHhcc
Confidence 4567775 56666654 568999999999999863 2 3455532 112678999999999999999875
Q ss_pred CCC---c-ccCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccc-cC-C-CCcchhhhcccCCc
Q 026733 117 LPS---S-WREMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLY-TP-D-ADFSCFADLALTSP 189 (234)
Q Consensus 117 l~~---~-~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~p 189 (234)
... . ..+....+.++++.+.++..|+|.|++++.+. ..+.+-+ .+ . ....++..++ .
T Consensus 463 ~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~-------------~~~~~G~l~~~~~~~~~~~~~~~---~ 526 (662)
T 2z3y_A 463 PPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP-------------SVNLFGHVGSTTASRGELFLFWN---L 526 (662)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT-------------TCSEEEECCSSSTTTTEEEEEEC---C
T ss_pred cCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccC-------------CCCceeeecCCCCCCCceeEEEe---C
Confidence 321 0 11112234577887778999999999986410 0010100 00 0 0000000000 0
Q ss_pred cccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 190 EDYYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 190 ~~~~~~g~~~~~~~~~~--~~~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
. +.. ++..++. .+..+..+++|++++.++++|+++|+.
T Consensus 527 --~---~~~-vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~ 566 (662)
T 2z3y_A 527 --Y---KAP-ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGS 566 (662)
T ss_dssp --S---SSS-EEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCT
T ss_pred --C---CCC-EEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCC
Confidence 0 122 3333443 223566889999999999999999863
No 21
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.54 E-value=5.5e-07 Score=79.47 Aligned_cols=94 Identities=12% Similarity=0.117 Sum_probs=63.0
Q ss_pred CCCcccccHHHHHHHHHH--HhcCCccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEE
Q 026733 11 FIDCDNISARCMLTIFAL--FATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGL 88 (234)
Q Consensus 11 ~~~~~~~SA~~~~~~l~~--~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v 88 (234)
+.++.++||.+++..+.. +.....+. .....++++ .+++++.+.+ +.+|++|++|++|..++ + ++. |
T Consensus 170 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~~-~l~~~l~~~l---~~~v~~~~~V~~i~~~~---~--~v~-v 238 (424)
T 2b9w_A 170 YGHFDNVPAAYVLKYLDFVTMMSFAKGD-LWTWADGTQ-AMFEHLNATL---EHPAERNVDITRITRED---G--KVH-I 238 (424)
T ss_dssp CCCTTTSBHHHHHHHSCHHHHHHHHHTC-CBCCTTCHH-HHHHHHHHHS---SSCCBCSCCEEEEECCT---T--CEE-E
T ss_pred cCChHhcCHHHHHHhhhHhhhhcccCCc-eEEeCChHH-HHHHHHHHhh---cceEEcCCEEEEEEEEC---C--EEE-E
Confidence 346788999887544332 11111111 223566665 5777776654 56899999999999876 3 443 6
Q ss_pred EEeecCCCeEEecCEEEEcCChhhHhhhCCC
Q 026733 89 AMSKATDKKVVQADAYVAACDVPGIKRLLPS 119 (234)
Q Consensus 89 ~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~ 119 (234)
.+ .+|+ +.||.||+|+|+..+.++++.
T Consensus 239 ~~---~~g~-~~ad~Vv~a~~~~~~~~~l~~ 265 (424)
T 2b9w_A 239 HT---TDWD-RESDVLVLTVPLEKFLDYSDA 265 (424)
T ss_dssp EE---SSCE-EEESEEEECSCHHHHTTSBCC
T ss_pred EE---CCCe-EEcCEEEECCCHHHHhhccCC
Confidence 65 3564 899999999999987777764
No 22
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.52 E-value=2.9e-07 Score=87.99 Aligned_cols=155 Identities=15% Similarity=0.138 Sum_probs=93.3
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhh----CCCcccCchHH
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL----LPSSWREMKFF 127 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~L----l~~~~~~~~~~ 127 (234)
.+.+.+. .|++|++|++|++|..+++ + + .|.+ .+|+.+.||+||+|+|+..+++. .|. .+....
T Consensus 535 ~l~~aLa-~gl~I~l~t~V~~I~~~~~--~---v-~V~~---~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~--Lp~~~~ 602 (776)
T 4gut_A 535 VIIEKLA-EGLDIQLKSPVQCIDYSGD--E---V-QVTT---TDGTGYSAQKVLVTVPLALLQKGAIQFNPP--LSEKKM 602 (776)
T ss_dssp HHHHHHH-TTSCEESSCCEEEEECSSS--S---E-EEEE---TTCCEEEESEEEECCCHHHHHTTCSEEESC--CCHHHH
T ss_pred HHHHHHH-hCCcEEcCCeeEEEEEcCC--E---E-EEEE---CCCcEEEcCEEEECCCHHHHhhcccccCCC--CCHHHH
Confidence 3444433 4889999999999998863 3 3 3655 47888999999999999988752 222 122234
Q ss_pred HHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccc-cCC-CCcchhhhcccCCccccccCCCceEEEEEe
Q 026733 128 NNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLY-TPD-ADFSCFADLALTSPEDYYREGQGSLLQCVL 205 (234)
Q Consensus 128 ~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~-~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~ 205 (234)
+.+.++.+.++..|+|.|++++... ... ..+.+-+ .+. ....++..+-. ..+.+...++..++
T Consensus 603 ~ai~~l~~g~~~KV~l~f~~~FW~~-------~~~---g~~~fG~l~~~~~~~~~~~~~~d-----~~p~g~~~vL~~~i 667 (776)
T 4gut_A 603 KAINSLGAGIIEKIALQFPYRFWDS-------KVQ---GADFFGHVPPSASKRGLFAVFYD-----MDPQKKHSVLMSVI 667 (776)
T ss_dssp HHHHHEEEECCEEEEEECSSCTTHH-------HHT---TCSEEEECCSSGGGTTEEEEEEE-----SCTTSCSCEEEEEE
T ss_pred HHHHhCCCeeEEEEEEecCcccccc-------cCC---CCceEEeecCCcCCCceEEEEec-----CCCCCCceEEEEEe
Confidence 5566776668889999999986421 110 0111100 000 00001111101 12223234555555
Q ss_pred eC--CCCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 206 TP--GDPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 206 ~~--~~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
.. +..+..++++|+.+.++++|+++|+.
T Consensus 668 ~G~~a~~l~~lsdeel~~~~l~~L~~ifg~ 697 (776)
T 4gut_A 668 AGEAVASVRTLDDKQVLQQCMATLRELFKE 697 (776)
T ss_dssp CTHHHHHHHTSCHHHHHHHHHHHHHHHTTT
T ss_pred cchhHHHHHcCCHHHHHHHHHHHHHHHhCc
Confidence 43 23567889999999999999999973
No 23
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.48 E-value=4.1e-07 Score=87.70 Aligned_cols=159 Identities=11% Similarity=0.079 Sum_probs=97.4
Q ss_pred eecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCCCeEEecCEEEEcCChhhHhh
Q 026733 39 RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDKKVVQADAYVAACDVPGIKR 115 (234)
Q Consensus 39 g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~---~~~g~~~~aD~VV~a~~~~~~~~ 115 (234)
...+|+++ .|+++|++ +.+|++|++|++|...++ + +.|.+.+ +.+|+.+.||+||+|+|+..+++
T Consensus 565 ~~~~gG~~-~L~~aLa~-----~l~I~Lnt~V~~I~~~~~--g----V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~ 632 (852)
T 2xag_A 565 LTVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTAS--G----CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQ 632 (852)
T ss_dssp EEETTCTT-HHHHHHTT-----TCCEECSEEEEEEEEETT--E----EEEEEEESSSTTCEEEEEESEEEECCCHHHHHC
T ss_pred EEecCcHH-HHHHHHHh-----CCCEEeCCeEEEEEEcCC--c----EEEEEeecccCCCCeEEECCEEEECCCHHHHHh
Confidence 34577776 57776664 457999999999999863 2 3455532 11267899999999999999988
Q ss_pred hCCCc---c-cCchHHHHhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccc--cCC---CCcchhhhccc
Q 026733 116 LLPSS---W-REMKFFNNIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLY--TPD---ADFSCFADLAL 186 (234)
Q Consensus 116 Ll~~~---~-~~~~~~~~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~---~~~~~~~~~~~ 186 (234)
++..- + .+....+.++++.+.++..|+|.|++++.+. ..+.+-+ ... +.+.++ ++
T Consensus 633 l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~-------------~~~~fG~l~~~~~~~~~l~~~--~~- 696 (852)
T 2xag_A 633 QPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDP-------------SVNLFGHVGSTTASRGELFLF--WN- 696 (852)
T ss_dssp SSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCT-------------TCCEEEECCSSSTTTTTTCEE--EE-
T ss_pred hhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCC-------------CCCeeeeeccccCCCCceEEE--ec-
Confidence 53210 1 1112234577887778999999999976410 0010100 000 001111 00
Q ss_pred CCccccccCCCceEEEEEee--CCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 026733 187 TSPEDYYREGQGSLLQCVLT--PGDPYMPLPNDEIIRRVAKQLYFHHPK 233 (234)
Q Consensus 187 ~~p~~~~~~g~~~~~~~~~~--~~~~~~~~~~eei~~~~l~~L~~~~P~ 233 (234)
. . +.. ++..++. .+..+..++++++++.++++|+++|+.
T Consensus 697 --~--~---~~p-vLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~ 737 (852)
T 2xag_A 697 --L--Y---KAP-ILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGS 737 (852)
T ss_dssp --C--S---SSS-EEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCT
T ss_pred --C--C---CCC-EEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCc
Confidence 0 0 122 3334443 233566889999999999999999863
No 24
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.48 E-value=1.2e-06 Score=81.85 Aligned_cols=84 Identities=12% Similarity=0.057 Sum_probs=65.0
Q ss_pred ccHHHHHHHHHHHh---cCCccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec
Q 026733 17 ISARCMLTIFALFA---TKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA 93 (234)
Q Consensus 17 ~SA~~~~~~l~~~~---~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~ 93 (234)
.++...+..+..++ .+-..+.+.|+.||.+ .|+++|++.++..||+|++|++|++|.++++ +| +++||.+
T Consensus 346 ~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g-~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~-~g--~v~gV~~--- 418 (650)
T 1vg0_A 346 SCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQG-ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKE-SR--KCKAVID--- 418 (650)
T ss_dssp CBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTT-HHHHHHHHHHHHTTCEEESSCCEEEEEEETT-TC--CEEEEEE---
T ss_pred CchhHHHHHHHHHHHHHHhhccCceEEeCCchh-HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCC-CC--eEEEEEe---
Confidence 45665544444432 2222247889999987 6999999999999999999999999999861 14 7999886
Q ss_pred CCCeEEecCEEEEc
Q 026733 94 TDKKVVQADAYVAA 107 (234)
Q Consensus 94 ~~g~~~~aD~VV~a 107 (234)
.+|+.+.||+||++
T Consensus 419 ~~Ge~i~A~~VVs~ 432 (650)
T 1vg0_A 419 QFGQRIISKHFIIE 432 (650)
T ss_dssp TTSCEEECSEEEEE
T ss_pred CCCCEEEcCEEEEC
Confidence 47999999999994
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.45 E-value=2.3e-06 Score=72.76 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=93.9
Q ss_pred hHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEe-cCEEEEcCChhhHhhhCCCcccCchHHH
Q 026733 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQ-ADAYVAACDVPGIKRLLPSSWREMKFFN 128 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~-aD~VV~a~~~~~~~~Ll~~~~~~~~~~~ 128 (234)
.+.+.+.+.+ |++|+++++|++|..+++ + +.|.+ .+|+... +|.||.|.+.....++++.. .....
T Consensus 109 ~~~l~~~l~~-g~~i~~~~~v~~i~~~~~--~----~~v~~---~~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~ 175 (336)
T 1yvv_A 109 MSAITRAMRG-DMPVSFSCRITEVFRGEE--H----WNLLD---AEGQNHGPFSHVIIATPAPQASTLLAAA---PKLAS 175 (336)
T ss_dssp THHHHHHHHT-TCCEECSCCEEEEEECSS--C----EEEEE---TTSCEEEEESEEEECSCHHHHGGGGTTC---HHHHH
T ss_pred HHHHHHHHHc-cCcEEecCEEEEEEEeCC--E----EEEEe---CCCcCccccCEEEEcCCHHHHHHhhccC---HHHHH
Confidence 3456666554 899999999999998763 3 34555 4677664 99999999999888877642 22345
Q ss_pred HhhcCCCCcEEEEEEEecCccchhhhhHHHHHhhhhcCCCcccccCCCCcchhhhcccCCccccccCCCceEEEEEee--
Q 026733 129 NIYALVGVPVVTVQLRYNGWVTELQDLERSRQLRRALGLDNLLYTPDADFSCFADLALTSPEDYYREGQGSLLQCVLT-- 206 (234)
Q Consensus 129 ~~~~l~~~~~~~v~l~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~-- 206 (234)
.+.++.+.++..+.+.++++... ....+. ..+..+.+....+. .|. . .+.+..+.++..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~~~~~~~l~~~~~-~p~-~--~~~~~~~v~~~~~~ 236 (336)
T 1yvv_A 176 VVAGVKMDPTWAVALAFETPLQT--------------PMQGCF-VQDSPLDWLARNRS-KPE-R--DDTLDTWILHATSQ 236 (336)
T ss_dssp HHTTCCEEEEEEEEEEESSCCSC--------------CCCEEE-ECSSSEEEEEEGGG-STT-C--CCSSEEEEEEECHH
T ss_pred HHhhcCccceeEEEEEecCCCCC--------------CCCeEE-eCCCceeEEEecCc-CCC-C--CCCCcEEEEEeCHH
Confidence 56778888999999999987531 122222 22222222111110 010 0 111122222222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCC
Q 026733 207 PGDPYMPLPNDEIIRRVAKQLYFHHP 232 (234)
Q Consensus 207 ~~~~~~~~~~eei~~~~l~~L~~~~P 232 (234)
.+..+..++++++.+++++++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~lg 262 (336)
T 1yvv_A 237 WSRQNLDASREQVIEHLHGAFAELID 262 (336)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 23466788999999999999998875
No 26
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.36 E-value=9.4e-07 Score=78.82 Aligned_cols=90 Identities=12% Similarity=0.099 Sum_probs=67.4
Q ss_pred CcccccHHHHHHHHHHHhc--C-CccceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEE
Q 026733 13 DCDNISARCMLTIFALFAT--K-TEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA 89 (234)
Q Consensus 13 ~~~~~SA~~~~~~l~~~~~--~-~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~ 89 (234)
++.+.++...+..+..+.. . ...+.+.+++|+.. .++++|++.+++.|++|++|++|++|..++ + ++++|.
T Consensus 198 ~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~---~--~v~~v~ 271 (433)
T 1d5t_A 198 DYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGLG-ELPQGFARLSAIYGGTYMLNKPVDDIIMEN---G--KVVGVK 271 (433)
T ss_dssp GGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCTT-HHHHHHHHHHHHHTCCCBCSCCCCEEEEET---T--EEEEEE
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEeC---C--EEEEEE
Confidence 4556666543333333221 1 12345778998876 799999999999999999999999999886 5 788876
Q ss_pred EeecCCCeEEecCEEEEcCChhh
Q 026733 90 MSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 90 ~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
. +|+.+.||.||+|+++..
T Consensus 272 ~----~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 272 S----EGEVARCKQLICDPSYVP 290 (433)
T ss_dssp E----TTEEEECSEEEECGGGCG
T ss_pred E----CCeEEECCEEEECCCCCc
Confidence 4 788999999999998763
No 27
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.27 E-value=2.6e-06 Score=76.29 Aligned_cols=66 Identities=17% Similarity=0.097 Sum_probs=58.4
Q ss_pred ceeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEec--cCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 36 ~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~--~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
..+.+++|+.. .++++|++.+++.||+|++|++|++|..+ + + ++++|.+ +|+.+.||.||+|+++.
T Consensus 232 ~~~~~p~gG~~-~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~---~--~~~~V~~----~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 232 SPYLYPMYGLG-ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT---G--KFEGVKT----KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp CSEEEETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEEETTT---T--EEEEEEE----TTEEEECSCEEECGGGC
T ss_pred CceEeeCCCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEECCC---C--eEEEEEE----CCeEEECCEEEECCCcc
Confidence 35678899987 69999999999999999999999999988 5 5 7888876 68889999999998876
No 28
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.11 E-value=3.2e-06 Score=76.79 Aligned_cols=97 Identities=10% Similarity=0.032 Sum_probs=69.4
Q ss_pred ecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhh---
Q 026733 40 MLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRL--- 116 (234)
Q Consensus 40 ~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~L--- 116 (234)
+++| +. .++++|++.+. +++|++|++|++|..+++ + .+.|.+ .+|+.+.||+||+|+|+..++..
T Consensus 197 ~~~g-~~-~l~~~l~~~l~--~~~i~~~~~V~~I~~~~~--~---~v~v~~---~~g~~~~ad~VI~t~p~~~l~~~~~~ 264 (516)
T 1rsg_A 197 FALN-YD-SVVQRIAQSFP--QNWLKLSCEVKSITREPS--K---NVTVNC---EDGTVYNADYVIITVPQSVLNLSVQP 264 (516)
T ss_dssp EESC-HH-HHHHHHHTTSC--GGGEETTCCEEEEEECTT--S---CEEEEE---TTSCEEEEEEEEECCCHHHHHGGGSS
T ss_pred hhhC-HH-HHHHHHHHhCC--CCEEEECCEEEEEEEcCC--C---eEEEEE---CCCcEEECCEEEECCCHHHhhhcccc
Confidence 4455 43 56666666553 368999999999998642 2 255666 47888999999999999988643
Q ss_pred ----------CCCcccCchHHHHhhcCCCCcEEEEEEEecCccc
Q 026733 117 ----------LPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (234)
Q Consensus 117 ----------l~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~ 150 (234)
.|. .+....+.++++.+.++..|+|.|++++.
T Consensus 265 ~~~~~~~i~f~P~--Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW 306 (516)
T 1rsg_A 265 EKNLRGRIEFQPP--LKPVIQDAFDKIHFGALGKVIFEFEECCW 306 (516)
T ss_dssp CSCSTTCCEEESC--CCHHHHHHTTSSCCCCCEEEEEEESSCCS
T ss_pred ccccccceEecCC--CCHHHHHHHHhCCCCcceEEEEEeCCCCC
Confidence 222 12234456788888899999999999764
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.06 E-value=1.1e-06 Score=77.65 Aligned_cols=110 Identities=9% Similarity=-0.061 Sum_probs=77.0
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHhcCCcc--cee-eecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEecc
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFATKTEA--SLL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~~~~~--~~~-g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (234)
||+|++......+++++||.|+..+-.++...... ..+ |+|+|++. .+++.|+ ++.|++|++|++|+++
T Consensus 175 ~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~-~l~e~l~---~~~g~~V~l~~~v~~~---- 246 (397)
T 3hdq_A 175 FFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYT-RMFQNML---SSPNIKVMLNTDYREI---- 246 (397)
T ss_dssp HTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHH-HHHHHHT---CSTTEEEEESCCGGGT----
T ss_pred HHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHH-HHHHHHH---hccCCEEEECCeEEec----
Confidence 58999999999999999998764211112111111 123 68999996 5777764 4679999999999833
Q ss_pred CCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCc
Q 026733 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (234)
Q Consensus 78 ~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~ 148 (234)
+ ..+.+|.||+|+|++.+-.. .+.+|++.++.++++.++.+
T Consensus 247 ---~---------------~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~~~~~~~~~ 287 (397)
T 3hdq_A 247 ---A---------------DFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEFRHETHDTE 287 (397)
T ss_dssp ---T---------------TTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSS
T ss_pred ---c---------------ccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEEEEEEeccc
Confidence 1 12248999999998766321 24467778999999999864
No 30
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.94 E-value=1.2e-05 Score=76.03 Aligned_cols=109 Identities=8% Similarity=-0.086 Sum_probs=74.5
Q ss_pred ceeeecCCCCcccchHHHHHHHHHCCcEEEcCceee--EEEeccCCCCc---ceEEEEEEeecCCCe--EEecCEEEEcC
Q 026733 36 SLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR--EILYDKAANAE---TYVKGLAMSKATDKK--VVQADAYVAAC 108 (234)
Q Consensus 36 ~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~--~i~~~~~~~~~---~~~~~v~~~~~~~g~--~~~aD~VV~a~ 108 (234)
.....+.|+.. .|+++|++.+.. |++|++|++|+ +|..+++ ++ ...+.|... .+|+ .+.||+||+|+
T Consensus 337 ~~~~~i~GG~~-~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~--g~~~~~~~V~V~~~--~~G~~~~~~aD~VIvTv 410 (721)
T 3ayj_A 337 NEYTLPVTENV-EFIRNLFLKAQN-VGAGKLVVQVRQERVANACH--SGTASARAQLLSYD--SHNAVHSEAYDFVILAV 410 (721)
T ss_dssp CEECCSSSSTH-HHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEE--CSSSSCCEEEEEEE--TTCCEEEEEESEEEECS
T ss_pred cceeEECCcHH-HHHHHHHHhccc-CCceEeCCEEEeeeEEECCC--CCccccceEEEEEe--cCCceEEEEcCEEEECC
Confidence 45666788886 699999998764 78899999999 9998752 20 012334322 4666 78999999999
Q ss_pred ChhhHhhh-----CC----------------------Ccc-c-C-------chHHHHhhcCCCCcEEEEEEEe-----cC
Q 026733 109 DVPGIKRL-----LP----------------------SSW-R-E-------MKFFNNIYALVGVPVVTVQLRY-----NG 147 (234)
Q Consensus 109 ~~~~~~~L-----l~----------------------~~~-~-~-------~~~~~~~~~l~~~~~~~v~l~~-----d~ 147 (234)
|+..+..+ +. ..+ . + ....+.++++.+.+..-|.+.| ++
T Consensus 411 P~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~ 490 (721)
T 3ayj_A 411 PHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQ 490 (721)
T ss_dssp CHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGS
T ss_pred CHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCC
Confidence 99887431 11 000 1 1 2234557788888999999999 77
Q ss_pred ccc
Q 026733 148 WVT 150 (234)
Q Consensus 148 ~~~ 150 (234)
|+.
T Consensus 491 ~fW 493 (721)
T 3ayj_A 491 PWV 493 (721)
T ss_dssp TTS
T ss_pred Ccc
Confidence 653
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.88 E-value=3e-07 Score=80.33 Aligned_cols=111 Identities=11% Similarity=-0.097 Sum_probs=76.8
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHhc-CCc-cce-eeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEecc
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFAT-KTE-ASL-LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~-~~~-~~~-~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (234)
||+|++.+..+.+|+++||.++..+..++.. +.. ... .|+++|++. .++++|++ |++|++|++|++|. +
T Consensus 147 ~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~-----g~~i~l~~~V~~i~--~ 218 (367)
T 1i8t_A 147 LIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYT-KLIEKMLE-----GVDVKLGIDFLKDK--D 218 (367)
T ss_dssp HTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHH-HHHHHHHT-----TSEEECSCCGGGSH--H
T ss_pred HHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHH-HHHHHHhc-----CCEEEeCCceeeec--h
Confidence 4789999999999999999875211111111 111 112 368999986 57777765 79999999999873 2
Q ss_pred CCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCcc
Q 026733 78 AANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWV 149 (234)
Q Consensus 78 ~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~ 149 (234)
+ | .+.+|+||+|+|++.+.++ .+.++++.++.++.+.+|++.
T Consensus 219 ------~---v---------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~~d~~~ 260 (367)
T 1i8t_A 219 ------S---L---------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETERHEFPN 260 (367)
T ss_dssp ------H---H---------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEEESSSC
T ss_pred ------h---h---------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEEecccc
Confidence 2 1 1248999999999876543 134566778999999999753
No 32
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.71 E-value=5.2e-07 Score=79.66 Aligned_cols=113 Identities=8% Similarity=-0.183 Sum_probs=78.0
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHhcC-Cccc-ee-eecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEecc
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFATK-TEAS-LL-RMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDK 77 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~~~-~~~~-~~-g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~ 77 (234)
+|+|++.+..+.+++++|+.++..+..++... .... .+ ++++|++. .++++|++ +.|++|++|++|++|..
T Consensus 157 ~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~I~l~~~V~~I~~-- 230 (399)
T 1v0j_A 157 FVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYT-AWLQNMAA---DHRIEVRLNTDWFDVRG-- 230 (399)
T ss_dssp HTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHH-HHHHHHTC---STTEEEECSCCHHHHHH--
T ss_pred HHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHH-HHHHHHHh---cCCeEEEECCchhhhhh--
Confidence 47888888888999999998752111111111 1111 23 58888886 57777776 57899999999998832
Q ss_pred CCCCcceEEEEEEeecCCCeEE-ecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCc
Q 026733 78 AANAETYVKGLAMSKATDKKVV-QADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGW 148 (234)
Q Consensus 78 ~~~~~~~~~~v~~~~~~~g~~~-~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~ 148 (234)
. | + .+ .||+||+|+|+..+.++. +.++++.++.++.+.+|.+
T Consensus 231 ------~---v------~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 231 ------Q---L------R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp ------H---H------T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEESSS
T ss_pred ------h---h------h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEEEEEEEEccc
Confidence 2 2 1 23 599999999998776651 2356667888899988875
No 33
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.52 E-value=5.7e-06 Score=72.62 Aligned_cols=106 Identities=9% Similarity=-0.035 Sum_probs=73.8
Q ss_pred CchHHHHHcCCCCcccccHHHHHHHHHHHh-cCCc-cce-eeecCCCCcccchHHHHHHHHHCCcEEEcCceee-EEEec
Q 026733 1 MWDPVAYALGFIDCDNISARCMLTIFALFA-TKTE-ASL-LRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCR-EILYD 76 (234)
Q Consensus 1 ~w~pl~~~~~~~~~~~~SA~~~~~~l~~~~-~~~~-~~~-~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~-~i~~~ 76 (234)
||+|++.+..+.+|+++|+.++..+..++. .+.. ... .++++|+++ .++++|++ +.|++|++|++|+ +|
T Consensus 151 ~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~-~l~~~l~~---~~g~~I~l~~~V~~~i--- 223 (384)
T 2bi7_A 151 FFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYT-QMIKSILN---HENIKVDLQREFIVEE--- 223 (384)
T ss_dssp HTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHH-HHHHHHHC---STTEEEEESCCCCGGG---
T ss_pred HHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHH-HHHHHHHh---cCCCEEEECCeeehhh---
Confidence 478999899999999999987421111111 1111 112 358899986 57777775 4789999999998 66
Q ss_pred cCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEec
Q 026733 77 KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYN 146 (234)
Q Consensus 77 ~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d 146 (234)
. + .+|+||+|+|++.+.+++ +.++++.++.++.+.+|
T Consensus 224 ----~--~---------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 224 ----R--T---------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ----G--G---------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEEEEEE
T ss_pred ----h--c---------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEEEEeC
Confidence 1 1 189999999998876652 23456678888888887
No 34
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.41 E-value=0.00041 Score=61.17 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=50.4
Q ss_pred cchHHHHHHHHHCCcEEEcCc---eeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRW---GCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~---~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.++++|++|++++ +|++|..++ + ++++|++ .+|+.+.||.||.|+...+
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~---~--~v~gV~t---~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN---N--DVKGAVT---ADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET---T--EEEEEEE---TTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC---C--eEEEEEE---CCCCEEECCEEEECCCCCh
Confidence 578899999999999999999 999999876 4 7888987 4787899999999998764
No 35
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.31 E-value=0.0034 Score=57.64 Aligned_cols=66 Identities=17% Similarity=0.108 Sum_probs=52.7
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChhh--HhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG--IKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~~--~~~Ll~ 118 (234)
.+...+++.++++|++|+++++|++|..++ + ++++|.+.+..+| ..+.||.||.|+.+.+ +.+++.
T Consensus 171 ~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~---g--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g 240 (561)
T 3da1_A 171 RLTLEIMKEAVARGAVALNYMKVESFIYDQ---G--KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDR 240 (561)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcC---C--eEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcC
Confidence 578889999999999999999999999986 5 7889988642233 5789999999988753 455543
No 36
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.24 E-value=0.00089 Score=58.67 Aligned_cols=58 Identities=21% Similarity=0.242 Sum_probs=50.2
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + ++.+|.+ .+|+.+++|.||+++..
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~V~~---~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAEG---D--RVTGVVL---SDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEE---TTSCEEECSEEEECCCE
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEecC---C--cEEEEEe---CCCCEEEcCEEEECcCC
Confidence 344678889999999999999999999998875 4 7888988 48889999999999885
No 37
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.23 E-value=0.00088 Score=58.86 Aligned_cols=58 Identities=21% Similarity=0.148 Sum_probs=50.1
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + ++.+|.+ .+|+.+++|.||.++..
T Consensus 192 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~~v~l---~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 192 AGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG---T--KVTGVRM---QDGSVIPADIVIVGIGI 249 (415)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS---S--BEEEEEE---SSSCEEECSEEEECSCC
T ss_pred cCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC---C--cEEEEEe---CCCCEEEcCEEEECCCC
Confidence 344678889999999999999999999998875 4 7888988 48889999999999885
No 38
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.06 E-value=0.0032 Score=54.11 Aligned_cols=54 Identities=15% Similarity=0.007 Sum_probs=45.3
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.|.+.+++.|++|+++++|++|..++ + ++ +|.+ .+| .+.||.||.|+...
T Consensus 165 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~-~v~~---~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 165 FVCKAYVKAAKMLGAEIFEHTPVLHVERDG---E--AL-FIKT---PSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCEEECSS---S--SE-EEEE---TTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCcEEEEEEEC---C--EE-EEEc---CCc-eEEcCEEEECCChh
Confidence 578899999999999999999999999876 3 44 6665 344 78999999999875
No 39
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.97 E-value=0.0019 Score=57.40 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=49.7
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
...+.+.|.+.+++.|++|+++++|++|..++ + ++++|.+ .+|+.+.||.||.|.....
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~---~--~v~~V~~---~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN---G--QTKAVIL---QTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEE---TTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC---C--cEEEEEE---CCCCEEECCEEEECCCCCc
Confidence 34688999999999999999999999999875 4 6788887 3777799999999987543
No 40
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.96 E-value=0.0015 Score=59.15 Aligned_cols=57 Identities=21% Similarity=0.236 Sum_probs=47.6
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecC-EEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQAD-AYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD-~VV~a~~~ 110 (234)
.+.+.|.+.+++.|++|+++++|++|..+++ | +++||.+.+ +|+ .+.|| .||+|+.-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~--g--~v~GV~~~~--~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT--G--RVVGIVAKQ--YGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT--C--CEEEEEEEE--TTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC--C--cEEEEEEEE--CCcEEEEEeCCeEEEeCCC
Confidence 5889999999999999999999999999842 6 899998763 443 58897 99998763
No 41
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.93 E-value=0.0017 Score=55.25 Aligned_cols=57 Identities=7% Similarity=-0.046 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.++++|++|+++++|++|..+++ + ++.|.+ .+| ..+.||.||.|+...+
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~---~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 151 ALMLAYQGDAESDGAQLVFHTPLIAGRVRPE--G---GFELDF---GGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTT--S---SEEEEE---CTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--c---eEEEEE---CCCceeEEEeCEEEECCCcch
Confidence 5788999999999999999999999999863 3 345665 355 5889999999998763
No 42
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.87 E-value=0.0023 Score=58.74 Aligned_cols=57 Identities=12% Similarity=0.283 Sum_probs=49.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++.|++|+++++|++|..++ + ++++|.+ .+|+.+.||.||.|.....
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~---~--~v~gV~l---~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMED---G--QITGVTL---SNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESS---S--BEEEEEE---TTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeC---C--EEEEEEE---CCCCEEECCEEEECCCCCh
Confidence 578889999999999999999999999886 4 6888988 4788899999999988753
No 43
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.82 E-value=0.0022 Score=54.95 Aligned_cols=55 Identities=15% Similarity=-0.029 Sum_probs=45.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+...|.+.++++|++|+++++|++|..++ + + ++|++ .+| .+.||.||.|+...+
T Consensus 155 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~t---~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 155 ALHQGYLRGIRRNQGQVLCNHEALEIRRVD---G--A-WEVRC---DAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCCCEEEEET---T--E-EEEEC---SSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEeC---C--e-EEEEe---CCC-EEEcCEEEECCChhH
Confidence 678899999999999999999999999886 3 3 56655 244 889999999988753
No 44
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.79 E-value=0.0039 Score=53.58 Aligned_cols=56 Identities=11% Similarity=0.144 Sum_probs=47.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++++|++ .+| .+.||.||.|+...+
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~v~gv~~---~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIEN---N--EIKGVKT---NKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEE---TTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEEC---C--EEEEEEE---CCc-EEECCEEEECcchhH
Confidence 567889999999999999999999999876 4 6777876 355 799999999988753
No 45
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.64 E-value=0.0032 Score=54.22 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=52.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-HhhhC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~~~Ll 117 (234)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++++|.+.+.+++..+.||.||.|..... +.+.+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC---C--EEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 456788899999999999999999999886 5 78888875434567899999999988753 55543
No 46
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.59 E-value=0.0055 Score=56.17 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=48.9
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
..+.+.|.+.+++.|++|+++++|++|..+++ | +++||.+.+ .+|+ .+.||.||+|...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK--G--TVKGILVKG-MYKGYYWVKADAVILATGG 315 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT--S--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC--C--eEEEEEEEe-CCCcEEEEECCeEEEeCCC
Confidence 36788999999999999999999999998752 5 799988753 2565 6889999999774
No 47
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.58 E-value=0.0044 Score=53.57 Aligned_cols=56 Identities=13% Similarity=0.075 Sum_probs=47.4
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++.|++|+++++|++|..++ + ++++|.+ .+| .+.||.||.|.....
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~---~--~~~~v~~---~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG---E--KVTGVKT---TRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEEEEEE---TTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC---C--EEEEEEe---CCc-eEECCEEEECCchhH
Confidence 577889999999999999999999999876 4 6788876 355 789999999988653
No 48
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.53 E-value=0.0034 Score=55.09 Aligned_cols=56 Identities=14% Similarity=0.154 Sum_probs=47.2
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
..+.+.+.+.++++|++|+++++|++|..++ ++.+|.+ .+|+.+++|.||.+++..
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~---~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG------QLEQVMA---SDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS------SCCEEEE---TTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC------cEEEEEE---CCCCEEEcCEEEEeeCCe
Confidence 3567788999999999999999999997653 4567888 488999999999998853
No 49
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.47 E-value=0.0048 Score=54.45 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEe---------------ccCCCCcceEEEEEEeecCCCeEE--ecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILY---------------DKAANAETYVKGLAMSKATDKKVV--QADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~---------------~~~~~~~~~~~~v~~~~~~~g~~~--~aD~VV~a~~~ 110 (234)
.+.+.|.+.++++|++|+.+++|++|.. ++ + ++++|.+ .+| .+ .||.||.|+..
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~---~--~v~~V~t---~~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE---A--RASAAVL---SDG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC---E--EEEEEEE---TTS-CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC---C--ceEEEEe---CCC-EEeecCCEEEECCCc
Confidence 5788999999999999999999999998 44 4 6778876 356 67 99999999987
Q ss_pred hh
Q 026733 111 PG 112 (234)
Q Consensus 111 ~~ 112 (234)
.+
T Consensus 253 ~s 254 (448)
T 3axb_A 253 WS 254 (448)
T ss_dssp GH
T ss_pred CH
Confidence 63
No 50
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.46 E-value=0.0055 Score=54.40 Aligned_cols=58 Identities=12% Similarity=0.033 Sum_probs=47.3
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + ++..|.+ +|+.+++|.||.+++..
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~--~v~~v~~----~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD---D--EIITKTL----DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET---T--EEEEEET----TSCEEEESEEEECCCEE
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC---C--eEEEEEe----CCCEEECCEEEECcCCC
Confidence 444678889999999999999999999998644 4 5666643 77889999999998853
No 51
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.45 E-value=0.0063 Score=56.98 Aligned_cols=55 Identities=9% Similarity=0.051 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+...|.+.+++.|++|+++++|++|..++ + + ++|.+ .+|+.+.||.||.|+...
T Consensus 418 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~-v~V~t---~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 418 ELTRNVLELAQQQGLQIYYQYQLQNFSRKD---D--C-WLLNF---AGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEEeC---C--e-EEEEE---CCCCEEECCEEEECCCcc
Confidence 578899999999999999999999999986 3 4 46665 367789999999999876
No 52
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.43 E-value=0.0073 Score=53.39 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=47.8
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEe--ccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~--~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
...+.+.+.+.+++.|++|+++++|++|.. ++ + ++++|.+ .+|+.+.+|.||.+++.
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~---~--~v~~v~~---~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ---Q--KVTAVLC---EDGTRLPADLVIAGIGL 248 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT---C--CEEEEEE---TTSCEEECSEEEECCCE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC---C--cEEEEEe---CCCCEEEcCEEEECCCC
Confidence 345677889999999999999999999987 43 4 6778887 48889999999999884
No 53
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.41 E-value=0.0088 Score=54.97 Aligned_cols=60 Identities=12% Similarity=0.061 Sum_probs=48.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~~ 112 (234)
.+...+++.++++|++|+.+++|++|..++ + ++++|.+.+..+| ..+.||.||.|+.+.+
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~---~--~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEG---D--QIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeC---C--EEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 467788899999999999999999999986 4 7889887532123 3789999999998763
No 54
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.39 E-value=0.013 Score=51.85 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=52.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChhh-HhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG-IKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~~-~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+++++|++|..++ + ++++|.+....+|+ .+.||.||.|..... +.+.+.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~---~--~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED---G--YVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC---C--EEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 467788888899999999999999999876 4 78888775321565 789999999988764 555554
No 55
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=96.37 E-value=0.0098 Score=53.03 Aligned_cols=57 Identities=19% Similarity=0.177 Sum_probs=47.2
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.+++.|++|+++++|++|..++ + ++. |.+. +|+.+++|.||.++..
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v~-v~~~---~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN---G--KVA-RVIT---DKRTLDADLVILAAGV 256 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS---S--BEE-EEEE---SSCEEECSEEEECSCE
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC---C--eEE-EEEe---CCCEEEcCEEEECCCC
Confidence 444678899999999999999999999998855 3 454 6664 7889999999999885
No 56
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.36 E-value=0.011 Score=54.32 Aligned_cols=59 Identities=22% Similarity=0.234 Sum_probs=47.6
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
..+.+.|.+.+++.|++|+++++|++|..+++ | +++||.+.+ .+|+ .+.||.||+|+.-
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~--g--~v~GV~~~~-~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS--G--KVTGVLVKG-EYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC----C--CEEEEEEEE-TTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC--C--eEEEEEEEe-CCCcEEEEEcCEEEEeCCC
Confidence 35788999999999999999999999988752 4 789988752 2564 6889999999873
No 57
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.35 E-value=0.013 Score=48.87 Aligned_cols=59 Identities=12% Similarity=0.121 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec---CCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA---TDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~---~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|++|+++++|++|..++ + ++.+|.+... ++++.+++|.||.+++..
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQ---M--GVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECS---S--SEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCC---C--ceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 466778888889999999999999998765 4 6788887521 123678999999998864
No 58
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.31 E-value=0.0096 Score=57.10 Aligned_cols=56 Identities=20% Similarity=0.146 Sum_probs=48.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+...|.+.++++|++|+.+++|++|..++ + ++++|.+ .+| .+.||.||.|+...+
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~---~--~v~~V~t---~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG---G--RVTGVQT---ADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET---T--EEEEEEE---TTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC---C--EEEEEEE---CCc-EEECCEEEECCccch
Confidence 578899999999999999999999999876 4 6778876 244 799999999998764
No 59
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.30 E-value=0.0072 Score=56.76 Aligned_cols=55 Identities=9% Similarity=0.049 Sum_probs=45.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe-EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~-~~~aD~VV~a~~~~ 111 (234)
.+.+.|.+.+++.|++|+++++|++|..++ + + +.|.+ .+|+ .+.||.||.|+...
T Consensus 413 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~---~--~-v~V~t---~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 413 DLTHALMMLAQQNGMTCHYQHELQRLKRID---S--Q-WQLTF---GQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECS---S--S-EEEEE---C-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEeCCeEeEEEEeC---C--e-EEEEe---CCCcEEEECCEEEECCCcc
Confidence 578899999999999999999999999987 3 3 45665 3666 78999999999876
No 60
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.28 E-value=0.0093 Score=54.63 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
.+.+.|.+.+++.|++|+++++|++|..+++ + +++||.+.. .+|+ .+.||.||+|..-
T Consensus 251 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~--g--~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 251 EIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD--H--SVVGAVVHG-KHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp HHHHHHHHHHHHTTCCEECSEEEEEEEECTT--S--BEEEEEEEE-TTTEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEECCC--C--cEEEEEEEe-CCCcEEEEEcCEEEEecCC
Confidence 5789999999999999999999999998762 4 789988753 2565 6889999999774
No 61
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.15 E-value=0.012 Score=52.96 Aligned_cols=59 Identities=17% Similarity=0.005 Sum_probs=48.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~~ 112 (234)
.+...+++.++++|++|+++++|++|..++ ++++|.+.+..+|+ .+.||.||.|+.+.+
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~------~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARREN------GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEET------TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeC------CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 478899999999999999999999999875 46788774323564 789999999988763
No 62
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=96.08 E-value=0.014 Score=52.97 Aligned_cols=58 Identities=10% Similarity=0.015 Sum_probs=46.2
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEE--EEEEeecCCCe-EEecCEEEEcCCh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVK--GLAMSKATDKK-VVQADAYVAACDV 110 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~--~v~~~~~~~g~-~~~aD~VV~a~~~ 110 (234)
...+.+.+.+.++++|++|+++++|++|..+++ + ++. .|.+ .+|+ .+++|.||.++..
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~--~--~v~~~~v~~---~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN--G--RVQAVVAMT---PNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT--S--BEEEEEEEE---TTEEEEEECSCEEECCCC
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC--C--ceEEEEEEE---CCCcEEEEcCEEEECcCC
Confidence 346788899999999999999999999987542 4 553 3444 3676 8999999999874
No 63
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.07 E-value=0.016 Score=53.57 Aligned_cols=60 Identities=13% Similarity=0.078 Sum_probs=48.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+.+.|.+.+++.|++|+++++|++|..+++ | +++||.+.+..+|+ .+.||.||+|+.-.
T Consensus 144 ~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~--g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 144 ALLHTLYQQNLKNHTTIFSEWYALDLVKNQD--G--AVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--CEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEeCcEEEEEEECCC--C--EEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 5778899999999999999999999998632 5 78998865323554 58899999998753
No 64
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.03 E-value=0.014 Score=49.73 Aligned_cols=60 Identities=17% Similarity=0.072 Sum_probs=46.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+.+++|++|..++ + + +.|.+ .+| .+.||.||.|+...+ ..|++
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~---~--~-~~v~~---~~g-~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD---D--G-VTIET---ADG-EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--S-EEEEE---SSC-EEEEEEEEECCGGGG-GGTST
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC---C--E-EEEEE---CCC-eEEcCEEEEcCCccH-Hhhcc
Confidence 578899999999999999999999999876 3 3 34554 355 489999999998764 23444
No 65
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=96.03 E-value=0.015 Score=49.86 Aligned_cols=55 Identities=7% Similarity=0.024 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+...|.+.++++|++|+.+++|++|..++ + . +.|.+ ++..+.||.||.|+....
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~---~--~-~~v~~----~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISP---D--S-VKIET----ANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS---S--C-EEEEE----TTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecC---C--e-EEEEe----CCCEEEeCEEEEecCccH
Confidence 578899999999999999999999999876 3 2 34554 344789999999998753
No 66
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=96.02 E-value=0.014 Score=52.62 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=47.7
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+ .+|+.+++|.||.++...
T Consensus 233 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~---~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 233 FDETIREEVTKQLTANGIEIMTNENPAKVSLNTD--G---SKHVTF---ESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT--S---CEEEEE---TTSCEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--c---eEEEEE---CCCcEEEcCEEEECCCCc
Confidence 3446788899999999999999999999987652 2 356766 478889999999998853
No 67
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.98 E-value=0.016 Score=46.55 Aligned_cols=56 Identities=9% Similarity=0.016 Sum_probs=46.3
Q ss_pred cchHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.+.+.+++. |++++ +++|++|..++ + ++++|.+ .+|+.+.||.||.|.....
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~---~--~v~~v~~---~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG---N--RVVGVRT---WEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEE---TTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC---C--EEEEEEE---CCCCEEECCEEEECCCCCh
Confidence 5677888999997 99999 67999999876 4 6778877 4787899999999988753
No 68
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.97 E-value=0.016 Score=51.45 Aligned_cols=57 Identities=14% Similarity=0.129 Sum_probs=46.3
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + ++ .|.+ ++| .+++|.||.+++..
T Consensus 187 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~--~v-~v~~---~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 187 FDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA---N--GI-VLET---SEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS---S--CE-EEEE---SSC-EEEESEEEECSCCB
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC---C--eE-EEEE---CCC-EEEeCEEEECcCCC
Confidence 445678899999999999999999999998765 3 45 6666 245 89999999998864
No 69
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.96 E-value=0.018 Score=51.94 Aligned_cols=65 Identities=14% Similarity=0.174 Sum_probs=51.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++++|.+.. .+| ..+.||.||.|.... .+.+.+.
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~---~--~v~gv~~~~-~dG~~~~i~ad~VI~AdG~~S~vr~~lg 179 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG---E--RAVGVRYRN-TEGVELMAHARFIVDASGNRTRVSQAVG 179 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET---T--EEEEEEEEC-SSSCEEEEEEEEEEECCCTTCSSGGGTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC---C--EEEEEEEEe-CCCCEEEEEcCEEEECCCcchHHHHHcC
Confidence 466788889999999999999999999976 4 788887752 346 378999999998875 3555553
No 70
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.95 E-value=0.017 Score=51.92 Aligned_cols=56 Identities=18% Similarity=0.138 Sum_probs=46.2
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
...+.+.+.+.++++|++|+++++|++|..++ + + ..|.+ .+|+.+++|.||.++..
T Consensus 225 ~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~---~--~-~~v~l---~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 225 PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS---G--K-LLIKL---KDGRKVETDHIVAAVGL 280 (493)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECCCE
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC---C--e-EEEEE---CCCCEEECCEEEECCCC
Confidence 34577888999999999999999999998764 3 3 36766 48889999999999875
No 71
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.94 E-value=0.016 Score=50.13 Aligned_cols=56 Identities=18% Similarity=0.159 Sum_probs=46.3
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
...+.+.+.+.+++.|++|+++++|++|..++ + ...|.+ .+|+.+++|.||.++..
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~---~~~v~~---~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG---E---GLEAHL---SDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET---T---EEEEEE---TTSCEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC---C---EEEEEE---CCCCEEECCEEEECcCC
Confidence 34577899999999999999999999998765 2 245666 47888999999999885
No 72
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.94 E-value=0.015 Score=52.22 Aligned_cols=59 Identities=8% Similarity=0.030 Sum_probs=47.6
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+ .+|+.+++|.||.++...
T Consensus 229 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~---~~~v~~---~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 229 FDSELRKQLTEQLRANGINVRTHENPAKVTKNAD--G---TRHVVF---ESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT--S---CEEEEE---TTSCEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C---EEEEEE---CCCcEEEcCEEEEccCCC
Confidence 3346788899999999999999999999987652 2 345666 478789999999998853
No 73
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.92 E-value=0.015 Score=52.05 Aligned_cols=59 Identities=12% Similarity=0.055 Sum_probs=47.3
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|..+++ + ++..|.+ .+| +.+++|.||.++..
T Consensus 224 ~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~~~~v~~---~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 224 FDECIQNTITDHYVKEGINVHKLSKIVKVEKNVE--T--DKLKIHM---NDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC---C--CCEEEEE---TTSCEEEEESEEEECSCE
T ss_pred cCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC--C--cEEEEEE---CCCcEEEEcCEEEECCCC
Confidence 3446788899999999999999999999987642 3 3456766 477 78999999999885
No 74
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.91 E-value=0.022 Score=53.36 Aligned_cols=59 Identities=8% Similarity=-0.039 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+...|.+.+++.|++|+.+++|.+|..++ | ++.||.+.+..+|+ .+.||.||+|+.-.
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD---G--KCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC---C--EEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 578889999999999999999999999875 5 89998765323565 48899999997743
No 75
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.89 E-value=0.021 Score=51.38 Aligned_cols=58 Identities=16% Similarity=0.123 Sum_probs=47.0
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + ++ .|.+ ++|+.+++|.||.++...
T Consensus 221 ~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~---~--~v-~v~~---~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 221 EDADAALVLEESFAERGVRLFKNARAASVTRTG---A--GV-LVTM---TDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp SSHHHHHHHHHHHHHTTCEEETTCCEEEEEECS---S--SE-EEEE---TTSCEEEESEEEECCCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--EE-EEEE---CCCcEEEcCEEEECCCCC
Confidence 344678899999999999999999999998765 3 33 4554 478889999999999864
No 76
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.83 E-value=0.019 Score=51.47 Aligned_cols=57 Identities=14% Similarity=0.118 Sum_probs=47.3
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.+++.|++|+++++|++|..++ + ++ .|.+ .+|+.+.+|.||.+++..
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~~---~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE---N--CY-NVVL---TNGQTICADRVMLATGRV 287 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS---S--SE-EEEE---TTSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC---C--EE-EEEE---CCCcEEEcCEEEEeeCCC
Confidence 34678889999999999999999999998875 3 33 5666 478889999999998863
No 77
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.81 E-value=0.019 Score=49.61 Aligned_cols=54 Identities=17% Similarity=0.144 Sum_probs=43.4
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+...|.+.+++.|++|+++++|++|..++ + .+ .|.. ++..+.||.||.|....
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~---~--~v-~v~t----~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA---D--GV-SVTT----DRGTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET---T--EE-EEEE----SSCEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC---C--eE-EEEE----CCCEEEcCEEEEcCCcC
Confidence 467889999999999999999999999876 3 33 3543 33478999999998865
No 78
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=95.79 E-value=0.02 Score=49.73 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=49.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+.+++|++|..+++ + .+..|.. .+|+ .+.||.||.|.... .+.+++.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~v~v~~---~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGT--D--SVTTIED---INGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETT--E--EEEEEEE---TTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--E--EEEEEEc---CCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 4667888889999999999999999998863 3 3334443 4676 68999999998876 4556654
No 79
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.74 E-value=0.021 Score=43.67 Aligned_cols=54 Identities=7% Similarity=-0.026 Sum_probs=43.7
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
..+.+.+.+.+++.|++++++ +|++|..+++ + ..|.+ .+| .+++|.||.+....
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~--~----~~v~~---~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGG--V----FEVET---EEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS--S----EEEEC---SSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC--E----EEEEE---CCC-EEEECEEEECCCCC
Confidence 467888999999999999999 9999988752 2 44555 366 88999999998864
No 80
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=95.72 E-value=0.018 Score=51.23 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=46.6
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEE-EeecCCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLA-MSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~-~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.++++|++|+++++|++|..+++ + +..|. + .+|+ +.+|.||.++...
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~~---~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD--G---RRVATTM---KHGE-IVADQVMLALGRM 267 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT--S---CEEEEES---SSCE-EEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC--C---EEEEEEc---CCCe-EEeCEEEEeeCcc
Confidence 446788999999999999999999999988753 3 34566 5 4777 9999999998863
No 81
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.71 E-value=0.018 Score=49.84 Aligned_cols=63 Identities=14% Similarity=0.138 Sum_probs=50.0
Q ss_pred cchHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEE-EEEEeecCCCeEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVK-GLAMSKATDKKVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~-~v~~~~~~~g~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++. |++|+++++|++|..++ + +++ .|.+ .+|+.+.||.||.|.... .+++.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~g~v~~---~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE---R--HAIDQVRL---NDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT---T--SCEEEEEE---TTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC---C--ceEEEEEE---CCCCEEECCEEEECCCCChHHHHHhC
Confidence 5677888888888 99999999999999876 3 343 5666 478889999999998875 4666664
No 82
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.69 E-value=0.022 Score=52.91 Aligned_cols=59 Identities=12% Similarity=0.065 Sum_probs=48.5
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+...|.+.+++.|++|+.+++|.+|..++ | ++.||.+.+..+|+ .+.|++||+|+.-.
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLMEN---G--ECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEET---T--EEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEEC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 578889999999999999999999999875 5 89998875323564 68899999998753
No 83
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=95.65 E-value=0.025 Score=51.52 Aligned_cols=63 Identities=17% Similarity=0.358 Sum_probs=50.6
Q ss_pred cchHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-H-hhhCC
Q 026733 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~-~~Ll~ 118 (234)
.+.+.|.+.+++. |++|+++ +|++|..+++ + ++++|.+ .+|+.+.||.||.|..... + .+++.
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~--g--~~~~v~~---~~G~~i~ad~vI~A~G~~S~~~~~~lg 260 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDAN--G--NIESVRT---ATGRVFDADLFVDCSGFRGLLINKAME 260 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT--S--CEEEEEE---TTSCEEECSEEEECCGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC--C--CEEEEEE---CCCCEEECCEEEECCCCchhhHHHHhC
Confidence 4778899999998 9999999 9999998653 5 6778877 4788899999999998764 3 44544
No 84
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=95.60 E-value=0.039 Score=46.02 Aligned_cols=57 Identities=14% Similarity=0.169 Sum_probs=44.6
Q ss_pred hHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+++.|++|+++++|++|..++ + ++.+|.+....+|+ .+++|.||.+++..
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVGDG---K--KVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEecCC---c--eEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 4567888889999999999999998764 4 57788775322454 68999999998753
No 85
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.59 E-value=0.03 Score=46.77 Aligned_cols=57 Identities=11% Similarity=-0.000 Sum_probs=44.9
Q ss_pred hHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC--CeEEecCEEEEcCChh
Q 026733 50 SGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATD--KKVVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~--g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+. |++|+++++|++|..++ + ++.+|.+.+..+ ++.+.+|.||.+++..
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~---~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDG---K--LLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEccc---C--cEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 56777888776 99999999999998876 4 678888863112 4678999999998864
No 86
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.59 E-value=0.032 Score=50.07 Aligned_cols=63 Identities=14% Similarity=0.326 Sum_probs=50.1
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-H-hhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~-~~Ll~ 118 (234)
.+.+.|.+.+++.|++++.+ +|++|..+++ + ++++|.+ .+|+.+.||.||.|....+ + .+++.
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--~--~~~~v~~---~~g~~~~ad~vV~A~G~~S~~~~~~~g 238 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDER--G--WISGVHT---KQHGEISGDLFVDCTGFRGLLINQTLG 238 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEE---SSSCEEECSEEEECCGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC--C--CEEEEEE---CCCCEEEcCEEEECCCcchHHHHHHhC
Confidence 56778888899999999999 9999998653 5 6778877 3777899999999988864 3 34443
No 87
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.55 E-value=0.024 Score=50.03 Aligned_cols=55 Identities=13% Similarity=0.068 Sum_probs=45.4
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++.|++|+++++|++|..++ + . +.|.+ .+| .+.||.||.|.....
T Consensus 133 ~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-~~V~~---~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 133 DIIRMLMAEMKEAGVQLRLETSIGEVERTA---S--G-FRVTT---SAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEE---TTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEE---CCc-EEEeeEEEECCCCcc
Confidence 688999999999999999999999999876 3 2 45655 355 899999999988654
No 88
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.49 E-value=0.023 Score=50.92 Aligned_cols=56 Identities=18% Similarity=0.203 Sum_probs=45.8
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.+++.|++|+++++|++|..+ + ++..|.+ +|+.+++|.||.++..
T Consensus 234 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~----~--~v~~v~~----~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 234 YDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN----G--KVEKIIT----DKNEYDVDMVILAVGF 289 (490)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEETCCEEEEECS----S--SCCEEEE----SSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC----C--cEEEEEE----CCcEEECCEEEECCCC
Confidence 34457788999999999999999999999853 3 4556665 6788999999999885
No 89
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.49 E-value=0.026 Score=50.03 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=46.7
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+ .+|+.+++|.||.++..
T Consensus 206 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~---~~~v~~---~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 206 FDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD--G---SLTLEL---EDGRSETVDCLIWAIGR 263 (450)
T ss_dssp SCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT--S---CEEEEE---TTSCEEEESEEEECSCE
T ss_pred hhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--c---EEEEEE---CCCcEEEcCEEEECCCC
Confidence 3445788899999999999999999999987642 2 245666 47888999999999875
No 90
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=95.41 E-value=0.036 Score=49.24 Aligned_cols=56 Identities=11% Similarity=0.028 Sum_probs=45.5
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.++++|++|+++++|++|..++ + ...|.+ +++.+++|.||.++...
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~---~~~v~~----~~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD---G---EFVLTT----THGELRADKLLVATGRT 270 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET---T---EEEEEE----TTEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC---C---EEEEEE----CCcEEEcCEEEECCCCC
Confidence 34678889999999999999999999998764 2 345655 56789999999998853
No 91
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.38 E-value=0.045 Score=50.39 Aligned_cols=61 Identities=21% Similarity=0.231 Sum_probs=48.1
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCC---------CeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATD---------KKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~---~~~---------g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++.|++|+.+++|++|..+++ | ++++|.+.+ ..+ |..+.||.||.|.....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~--g--~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED--G--SVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT--S--SEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC--C--CEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 4567888999999999999999999998763 5 788887631 012 36799999999988753
No 92
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.28 E-value=0.05 Score=48.60 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=45.7
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.+++.|++|+++++|++|..+ + ++..|.+ ++..+++|.||.++...
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~----~--~v~~v~~----~~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN----E--RVEAVET----DKGTYKADLVLVSVGVK 281 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES----S--BEEEEEE----TTEEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC----C--cEEEEEE----CCCEEEcCEEEECcCCC
Confidence 3467788999999999999999999999764 3 5666665 56689999999998853
No 93
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.24 E-value=0.049 Score=44.94 Aligned_cols=55 Identities=13% Similarity=0.102 Sum_probs=42.6
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
+.+.+.+++.|++|+++++|++|..++ + ++.+|.+. ..+|+ .+++|.||.+++..
T Consensus 187 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 187 STVEKVKKNEKIELITSASVDEVYGDK---M--GVAGVKVK-LKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHHHCTTEEEECSCEEEEEEEET---T--EEEEEEEE-CTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHHHhcCCeEEEeCcEEEEEEcCC---C--cEEEEEEE-cCCCCeEEeecCeEEEEEcCC
Confidence 344555678999999999999998775 4 67888774 23564 78899999998854
No 94
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.24 E-value=0.044 Score=50.72 Aligned_cols=59 Identities=17% Similarity=0.064 Sum_probs=48.5
Q ss_pred cchHHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+...|.+.+++.| ++|+.+++|++|..++ + +++||...+..+|+ .+.||.||.|....
T Consensus 135 ~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~---g--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 135 HMLHTLFQTSLQFPQIQRFDEHFVLDILVDD---G--HVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHTTCTTEEEEETEEEEEEEEET---T--EEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 57788999999999 9999999999999876 5 78888654323676 68899999998754
No 95
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.23 E-value=0.042 Score=49.42 Aligned_cols=59 Identities=8% Similarity=-0.012 Sum_probs=47.0
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeE-EecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV-VQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~-~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..+++ + ...|.+ .+|+. +++|.||.++...
T Consensus 215 ~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~---~~~v~~---~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 215 FDESVINVLENDMKKNNINIVTFADVVEIKKVSD--K---NLSIHL---SDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST--T---CEEEEE---TTSCEEEEESEEEECCCBC
T ss_pred cchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC--c---eEEEEE---CCCcEEEECCEEEECCCCC
Confidence 3446788899999999999999999999987642 3 245666 47777 8999999998853
No 96
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.21 E-value=0.075 Score=44.49 Aligned_cols=58 Identities=10% Similarity=-0.005 Sum_probs=44.6
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+++.|++++++++|++|.-++ ++.+|.+....+| +.+++|.||.+++..
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGDE------RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccCC------CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 356677788888899999999999998743 5667777432245 678999999998854
No 97
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.21 E-value=0.035 Score=50.12 Aligned_cols=58 Identities=12% Similarity=0.060 Sum_probs=43.3
Q ss_pred hHHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-----eEEecCEEEEcCChh
Q 026733 50 SGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-----~~~~aD~VV~a~~~~ 111 (234)
...+.+.++++| ++|+++++|++|.++++ ++ +++||++.. .+| ..+.|+.||+++...
T Consensus 224 ~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~-g~--~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 224 DKTYLAAALGTGKVTIQTLHQVKTIRQTKD-GG--YALTVEQKD-TDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp TTTHHHHHHHTTSEEEEESEEEEEEEECTT-SS--EEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCC-CC--EEEEEEEeC-CCCccceeEEEeeCEEEEccCCC
Confidence 445555566676 89999999999999852 13 799998752 245 367899999998864
No 98
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.15 E-value=0.042 Score=48.68 Aligned_cols=56 Identities=11% Similarity=0.127 Sum_probs=45.6
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
..+.+.+.+.++++|++|+++++|++|..++ + . ..+.+ .+|+.+++|.||.++...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~---~--~-v~v~~---~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPEA---K--G-ARVEL---EGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeC---C--E-EEEEE---CCCeEEEcCEEEECcCCC
Confidence 4578889999999999999999999998765 2 2 34555 378889999999998854
No 99
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.12 E-value=0.033 Score=49.21 Aligned_cols=56 Identities=18% Similarity=0.100 Sum_probs=45.3
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.+++.|++|+++++|++|..++ ++..|.+ +|+.+++|.||.++...
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~------~v~~v~~----~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGDG------RVQKVVT----DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECSS------BCCEEEE----SSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccC------cEEEEEE----CCCEEECCEEEECcCCC
Confidence 34577889999999999999999999997653 4555655 56789999999998853
No 100
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.08 E-value=0.056 Score=48.09 Aligned_cols=57 Identities=19% Similarity=0.184 Sum_probs=46.1
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe-EEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK-VVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~-~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + . ..|.+ .+|+ .+++|.||.++..
T Consensus 205 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~---~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 205 FDPLLSATLAENMHAQGIETHLEFAVAALERDA---Q--G-TTLVA---QDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp SCHHHHHHHHHHHHHTTCEEESSCCEEEEEEET---T--E-EEEEE---TTCCEEEEESEEEECSCE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--e-EEEEE---eCCcEEEEcCEEEECCCC
Confidence 334577888999999999999999999998765 2 2 45666 4787 8999999999875
No 101
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=95.06 E-value=0.085 Score=43.62 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=42.7
Q ss_pred HHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+.+.+.+++ .|++|+++++|++|.-++ + ++.+|++....+| ..+.+|.||.++..
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcCC---C--cEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 567777887 699999999999998764 4 6778887532235 36889999999875
No 102
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.06 E-value=0.061 Score=47.09 Aligned_cols=57 Identities=12% Similarity=0.033 Sum_probs=45.2
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEec----cCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~----~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
...+.+.|.+.+++.|++|+++++|++|..+ + + + +.|.+ .+| .+.||.||.|+....
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~---~--~-~~v~~---~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK---V--R-FVLQV---NST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS---C--C-EEEEE---TTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC---C--e-EEEEE---CCC-EEECCEEEECCCCcc
Confidence 4468899999999999999999999999976 4 2 3 45655 244 789999999987544
No 103
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.98 E-value=0.06 Score=48.78 Aligned_cols=57 Identities=11% Similarity=0.370 Sum_probs=47.4
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++.|++++.+ +|++|..+++ + .+++|.+ .+|+.+.||.||.+.....
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~--g--~~~~v~~---~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNR--G--YISNLLT---KEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT--S--CEEEEEE---TTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC--C--cEEEEEE---CCCcEEEeCEEEECCCCch
Confidence 56788899999999999999 8999998653 5 5677876 4777899999999988764
No 104
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.94 E-value=0.057 Score=47.16 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=43.9
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|. + + +|.+ .+|+.+++|.||.+++.
T Consensus 185 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~----~-----~v~~---~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 185 APATLADFVARYHAAQGVDLRFERSVTGSV-D----G-----VVLL---DDGTRIAADMVVVGIGV 237 (408)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T----T-----EEEE---TTSCEEECSEEEECSCE
T ss_pred cCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C----C-----EEEE---CCCCEEEcCEEEECcCC
Confidence 334577889999999999999999999998 3 2 3566 47889999999999875
No 105
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=94.94 E-value=0.064 Score=46.15 Aligned_cols=64 Identities=6% Similarity=-0.025 Sum_probs=48.6
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+++++|++|..+++ + . +.|.+. .+|+ .+.||.||.|.... .+++.+.
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~--~--~-~~v~~~--~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG--E--R-PYVTFE--RDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS--S--S-CEEEEE--ETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC--C--c-eEEEEe--cCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 4567788888889999999999999988642 2 2 346652 2676 78999999998876 4666665
No 106
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.91 E-value=0.057 Score=45.88 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=46.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|++|+++++|++|..++ + ++.+|.+.. .+| +.+++|.||.+++..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~---~--~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN---G--VLTRVHLRS-SDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET---T--EEEEEEEEE-TTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC---C--ceEEEEEEe-cCCCeEEEeCCEEEECCCCC
Confidence 456778888899999999999999998875 4 677787741 255 678999999998753
No 107
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=94.90 E-value=0.078 Score=47.15 Aligned_cols=62 Identities=11% Similarity=0.154 Sum_probs=46.7
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee--cCCCeEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~--~~~g~~~~aD~VV~a~~~~ 111 (234)
+.+.+.+.+.+.++++|++|+++++|++|..++ + ....|.+.. .++++.+++|.||.++...
T Consensus 218 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~--~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 218 IDMEISKNFQRILQKQGFKFKLNTKVTGATKKS---D--GKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp CCHHHHHHHHHHHHHTTCEEECSEEEEEEEECT---T--SCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcC---C--ceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 344577889999999999999999999998765 2 223444321 2467789999999998853
No 108
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.83 E-value=0.058 Score=49.40 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=45.6
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.+++.|++|+++++|++|..++ + +|.+ .+|+.+++|.||.++..
T Consensus 226 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~-----~v~~---~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 226 IDYEMAAYVHEHMKNHDVELVFEDGVDALEENG---A-----VVRL---KSGSVIQTDMLILAIGV 280 (588)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG---T-----EEEE---TTSCEEECSEEEECSCE
T ss_pred CCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC---C-----EEEE---CCCCEEEcCEEEEccCC
Confidence 334678889999999999999999999997654 2 3666 48889999999999885
No 109
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.83 E-value=0.04 Score=47.94 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=43.2
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
...+.+.+.+.+++.|++++++++|++|.-+ +|.+ ++|+++++|.||.+.+.
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~----------~v~~---~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIREH----------EIVD---EKGNTIPADITILLPPY 268 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEECSS----------EEEE---TTSCEEECSEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEECCC----------eEEE---CCCCEEeeeEEEECCCC
Confidence 3467888999999999999999999999432 2666 48889999999999875
No 110
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.81 E-value=0.084 Score=46.93 Aligned_cols=60 Identities=13% Similarity=0.082 Sum_probs=45.9
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + + ..|.+.+ .+| +.+++|.||.++...
T Consensus 219 ~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~---~--~-~~v~~~~-~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 219 VDEQVAKEAQKILTKQGLKILLGARVTGTEVKN---K--Q-VTVKFVD-AEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEETCEEEEEEECS---S--C-EEEEEES-SSEEEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC---C--E-EEEEEEe-CCCcEEEECCEEEEeeCCc
Confidence 344678889999999999999999999998876 2 2 3355541 123 678999999999864
No 111
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.77 E-value=0.067 Score=44.29 Aligned_cols=58 Identities=14% Similarity=0.226 Sum_probs=44.2
Q ss_pred cchHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeec------CC-----CeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA------TD-----KKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~------~~-----g~~~~aD~VV~a~~~ 110 (234)
.+...+.+.+.+ .|++|+++++|++|..++ + ++.+|.+... .+ ...+.||.||.|...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~---~--~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG---N--RVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET---T--EEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC---C--eEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 455677777766 699999999999999876 4 7888876410 02 267899999999884
No 112
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.76 E-value=0.052 Score=48.99 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=42.5
Q ss_pred hHHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-----eEEecCEEEEcCChh
Q 026733 50 SGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-----KVVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-----~~~~aD~VV~a~~~~ 111 (234)
...+.+..+++| ++|+++++|++|.++++ ++ +++||++.. .+| ..+.|+.||+++..-
T Consensus 229 ~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~-g~--~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 229 DKTYLAQAAATGKLTITTLHRVTKVAPATG-SG--YSVTMEQID-EQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp TTTHHHHHHHTTCEEEECSEEEEEEEECSS-SS--EEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCC-CC--EEEEEEEeC-CCCcccccEEEEeCEEEEccCcc
Confidence 344555555665 89999999999999862 13 689998852 144 367899999998864
No 113
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=94.66 E-value=0.069 Score=48.20 Aligned_cols=57 Identities=12% Similarity=0.083 Sum_probs=42.7
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC----eEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK----KVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g----~~~~aD~VV~a~~~ 110 (234)
+++.+.+.+.+.|+++|++|++|++|++|.-+ + .+..+.. .+| +.+++|.||.++..
T Consensus 270 ~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~----~--~~~~~~~---~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 270 FEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK----Q--LLAKTKH---EDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEECSS----E--EEEEEEC---TTSCEEEEEEECSEEEECCCE
T ss_pred CCHHHHHHHHHHHHhcceeeecCceEEEEeCC----c--eEEEEEe---cCcccceeeeccCEEEEccCC
Confidence 55678889999999999999999999999543 2 2223322 344 46899999998763
No 114
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.52 E-value=0.073 Score=49.12 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=49.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChhh-HhhhC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG-IKRLL 117 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~~-~~~Ll 117 (234)
.+.+.|.+.+++.|++|+.+++|++|..++ + ++++|.+.. +| ..+.||.||.|..... +.+.+
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~---g--~~~~V~~~~--~G~~~~i~AdlVV~AdG~~S~lr~~l 194 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD---P--DRVVLTVRR--GGESVTVESDFVIDAGGSGGPISRKL 194 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS---T--TCEEEEEEE--TTEEEEEEESEEEECCGGGCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC---C--CEEEEEEec--CCceEEEEcCEEEECCCCcchhHHHc
Confidence 467788889999999999999999999874 3 467787742 56 5789999999988764 54443
No 115
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.51 E-value=0.12 Score=46.27 Aligned_cols=60 Identities=12% Similarity=0.134 Sum_probs=45.8
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.+++.|++|+++++|++|..++ + . ..|.+....+| +.+++|.||.++...
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~---~--~-~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG---D--G-AKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--E-EEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC---C--E-EEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 44678889999999999999999999998875 2 2 34555421124 688999999998853
No 116
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.49 E-value=0.081 Score=46.78 Aligned_cols=60 Identities=12% Similarity=0.072 Sum_probs=45.4
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.++++|++|+++++|++|..++ + + ..|.+...++++.+++|.||.++...
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEERE---D--G-VTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEET---T--E-EEEEEEETTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC---C--e-EEEEEEeCCceeEEEcCEEEECcCCC
Confidence 34577888999999999999999999998765 3 2 33444322245678999999998854
No 117
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.46 E-value=0.024 Score=49.38 Aligned_cols=54 Identities=9% Similarity=0.069 Sum_probs=40.1
Q ss_pred cchHHHHHHHHHCCcEEEcCceee---------EEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCR---------EILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~---------~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.|.+.+++.|++|+.+++|+ +|..++ + ++ +|.+ .+| .+.||.||.|....
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~---~--~v-~v~~---~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN---T--HQ-IVVH---ETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------------CB---CCE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC---C--eE-EEEE---CCc-EEECCEEEECCCcc
Confidence 478899999999999999999999 887765 3 44 5654 244 78999999998875
No 118
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.43 E-value=0.11 Score=46.99 Aligned_cols=63 Identities=10% Similarity=0.134 Sum_probs=48.9
Q ss_pred cchHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-H-hhhCC
Q 026733 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-I-KRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~-~~Ll~ 118 (234)
.+.+.|.+.+++ .|++++.+ +|++|..+++ + .+++|.+ .+|+.+.||.||.|..... + .+.+.
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~--g--~~~~v~~---~~g~~i~ad~vV~AdG~~S~~~~~~lg 241 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH--G--DIEKLIT---KQNGEISGQLFIDCTGAKSLLLGEHLQ 241 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT--S--CEEEEEE---SSSCEEECSEEEECSGGGCCCCCCCTC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC--C--cEEEEEE---CCCCEEEcCEEEECCCcchHHHHHHhC
Confidence 467788888888 89999999 6999998753 5 5667776 3666799999999988864 3 44554
No 119
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=94.39 E-value=0.15 Score=41.99 Aligned_cols=55 Identities=15% Similarity=0.098 Sum_probs=40.4
Q ss_pred HHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
..+.+.+.+ .|++++++++|++|..++ ++.+|.+.+..+|+ .+++|.||.+++..
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKGDK------VVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEeccC------ceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 345555555 499999999999998764 56778775322365 78999999998753
No 120
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.39 E-value=0.05 Score=48.60 Aligned_cols=61 Identities=11% Similarity=-0.050 Sum_probs=46.1
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-cCCCeEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~-~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.++++|++|+++++|++|..++ + ...|.+.+ .++|+.+.+|.||.++...
T Consensus 224 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~---~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 224 ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE---D---GVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEET---T---EEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC---C---eEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 344678889999999999999999999998764 2 24566641 0116778999999998853
No 121
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.34 E-value=0.098 Score=46.42 Aligned_cols=60 Identities=8% Similarity=0.042 Sum_probs=44.3
Q ss_pred CcccchHHHHHHH-HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYI-TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l-~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+.+.+ +++|++|+++++|++|..++ + + ..|.+.. .+| +.+++|.||.++...
T Consensus 213 ~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~-~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 213 LDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG---D--S-VSLEVEG-KNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS---S--S-EEEEEEC-C---EEEEEESEEEECSCEE
T ss_pred CCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC---C--e-EEEEEEc-CCCceEEEECCEEEECCCcc
Confidence 3345678899999 99999999999999998765 2 2 3455421 145 678999999998753
No 122
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.24 E-value=0.17 Score=45.05 Aligned_cols=62 Identities=10% Similarity=0.016 Sum_probs=45.7
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC----CeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD----KKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~----g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|..+++ + ....|.+.+..+ |+.+++|.||.++..
T Consensus 226 ~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 226 FDSMISTNCTEELENAGVEVLKFSQVKEVKKTLS--G--LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp SCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS--S--EEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--cEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 3446788899999999999999999999987652 3 234455531111 267899999999885
No 123
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.19 E-value=0.075 Score=47.28 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=45.8
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEe--ccCCCCcceEEEEEEee--cCCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILY--DKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~--~~~~~~~~~~~~v~~~~--~~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.++++|++|+++++|++|.. ++ +...|.+.+ +++++.+++|.||.++...
T Consensus 223 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 223 DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK------NVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT------TEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC------CeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 345778899999999999999999999987 33 235565531 1245678999999998853
No 124
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.18 E-value=0.19 Score=41.40 Aligned_cols=57 Identities=11% Similarity=0.068 Sum_probs=42.5
Q ss_pred hHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 50 SGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+ .|++|+++++|++|..++ + ++.+|.+....+|+ .+++|.||.++...
T Consensus 181 ~~~~~~~l~~~~gv~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 181 APITLEHAKNNDKIEFLTPYVVEEIKGDA---S--GVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp CHHHHHHHHTCTTEEEETTEEEEEEEEET---T--EEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred CHHHHHHHhhCCCeEEEeCCEEEEEECCC---C--cEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 3556677764 799999999999998764 3 56678775322454 78999999998753
No 125
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.18 E-value=0.12 Score=45.88 Aligned_cols=60 Identities=12% Similarity=0.221 Sum_probs=45.3
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec--CCCeEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~--~~g~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.+++.|++|+++++|++|..++ + . ..|.+... ++++.+++|.||.++...
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG---D--G-VKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECSS---S--S-EEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC---C--e-EEEEEEecCCCcceEEECCEEEECCCCC
Confidence 34577889999999999999999999998765 2 2 34554321 224789999999998864
No 126
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.16 E-value=0.26 Score=43.96 Aligned_cols=61 Identities=13% Similarity=0.010 Sum_probs=45.2
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.++++|++|+++++|++|...++ + . ..|.+.+..+|+ .+++|.||.++...
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~--~--~-~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT--N--Q-LQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT--S--C-EEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC--C--c-EEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 346788899999999999999999999987542 3 2 345554322355 47899999998853
No 127
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.13 E-value=0.064 Score=48.18 Aligned_cols=61 Identities=10% Similarity=0.035 Sum_probs=46.1
Q ss_pred eeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 37 LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 37 ~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+-+..+++. ++.+.++++|++|+++++|++|.-++ ++.+|.+ .+|+.+++|.||.++...
T Consensus 252 ~vvViGgG~~-----gle~~l~~~GV~v~~~~~v~~i~~~~------~v~~v~~---~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 252 KVAVTGSKAD-----EVIQELERWGIDYVHIPNVKRVEGNE------KVERVID---MNNHEYKVDALIFADGRR 312 (493)
T ss_dssp EEEEESTTHH-----HHHHHHHHHTCEEEECSSEEEEECSS------SCCEEEE---TTCCEEECSEEEECCCEE
T ss_pred EEEEECCCHH-----HHHHHHHhCCcEEEeCCeeEEEecCC------ceEEEEe---CCCeEEEeCEEEECCCcC
Confidence 4445555542 34488899999999999999997543 4566766 478899999999998853
No 128
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.08 E-value=0.11 Score=46.26 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=44.4
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC--Ce--EEecCEEEEcCCh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD--KK--VVQADAYVAACDV 110 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~--g~--~~~aD~VV~a~~~ 110 (234)
...+.+.+.+.++++|++|+++++|++|..++ + + ..|.+.. + |+ .+++|.||.++..
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~---~--~-~~v~~~~--~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK---D--G-LHVRLEP--AEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET---T--E-EEEEEEE--TTCCSCEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC---C--E-EEEEEee--cCCCceeEEEcCEEEECCCc
Confidence 34577888999999999999999999998765 3 3 3455531 4 65 7899999999874
No 129
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=94.08 E-value=0.14 Score=45.41 Aligned_cols=58 Identities=16% Similarity=0.117 Sum_probs=44.7
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++|++|+++++|++|.-++ + + ..+.+. .+| +.+++|.||.++..
T Consensus 210 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~---~--~-~~v~~~--~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 210 EDADVSKEIEKQFKKLGVTILTATKVESIADGG---S--Q-VTVTVT--KDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCEEEEEEECS---S--C-EEEEEE--SSSCEEEEEESEEEECSCE
T ss_pred cCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC---C--e-EEEEEE--cCCceEEEEcCEEEECCCC
Confidence 344577889999999999999999999998765 2 2 335543 245 67899999999875
No 130
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.07 E-value=0.19 Score=41.90 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=41.4
Q ss_pred hHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 50 SGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+ .|++|+++++|++|..++ ++.+|.+....+|+ .+++|.||.+++..
T Consensus 190 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~------~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 190 NKVAQARAFANPKMKFIWDTAVEEIQGAD------SVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp CHHHHHHHHTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred chHHHHHHHhcCCceEecCCceEEEccCC------cEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 3556666665 699999999999998653 56788775322454 78999999998753
No 131
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=94.05 E-value=0.11 Score=48.38 Aligned_cols=55 Identities=11% Similarity=0.016 Sum_probs=46.4
Q ss_pred cchHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.|.+.+++ .|++| ++++|++|..++ + ++++|.+ .+|..+.||.||.|+...
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~---g--~V~GV~t---~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN---N--QVVGVRT---NLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS---S--BEEEEEE---TTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC---C--EEEEEEE---CCCcEEEeCEEEEccCCC
Confidence 467888899988 59999 578999999876 4 7889987 478899999999998864
No 132
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.93 E-value=0.27 Score=44.79 Aligned_cols=83 Identities=12% Similarity=0.025 Sum_probs=57.5
Q ss_pred cHHHHHHHHHHHhcCCccc-eeeecCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC
Q 026733 18 SARCMLTIFALFATKTEAS-LLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK 96 (234)
Q Consensus 18 SA~~~~~~l~~~~~~~~~~-~~g~~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g 96 (234)
.+..+..+|+++...-.-. +-..++ ...+.+.+.+.+.++++|+++++++.|+++...+ + + ..|.+ .++
T Consensus 234 IGlE~A~~~~~lG~~VTii~~~~~L~-~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~---~--~-~~v~~---~~~ 303 (542)
T 4b1b_A 234 VALECSGFLNSLGYDVTVAVRSIVLR-GFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD---D--K-ILVEF---SDK 303 (542)
T ss_dssp HHHHHHHHHHHHTCCEEEEESSCSST-TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET---T--E-EEEEE---TTS
T ss_pred HHHHHHHHHHhcCCeEEEeccccccc-ccchhHHHHHHHHHHhhcceeecceEEEEEEecC---C--e-EEEEE---cCC
Confidence 4556777777665321100 001122 2344688999999999999999999999999876 3 2 34555 477
Q ss_pred eEEecCEEEEcCCh
Q 026733 97 KVVQADAYVAACDV 110 (234)
Q Consensus 97 ~~~~aD~VV~a~~~ 110 (234)
+.+.+|.|+.|+..
T Consensus 304 ~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 304 TSELYDTVLYAIGR 317 (542)
T ss_dssp CEEEESEEEECSCE
T ss_pred CeEEEEEEEEcccc
Confidence 78889999999884
No 133
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=93.84 E-value=0.14 Score=45.09 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=44.0
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
....+.+.+.+.++++|++++++++|+++. + + .|.+ ++|+.+++|.||.++..
T Consensus 186 ~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~---~-----~v~~---~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 186 MDADMNQPILDELDKREIPYRLNEEINAIN--G---N-----EITF---KSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp SCGGGGHHHHHHHHHTTCCEEESCCEEEEE--T---T-----EEEE---TTSCEEECSEEEECCCE
T ss_pred ccchhHHHHHHHhhccceEEEeccEEEEec--C---C-----eeee---cCCeEEeeeeEEEEece
Confidence 344688999999999999999999999884 2 2 2556 48999999999999885
No 134
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.77 E-value=0.11 Score=46.29 Aligned_cols=60 Identities=8% Similarity=-0.048 Sum_probs=45.1
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
...+.+.+.+.++++|++|+++++|++|..+++ + + ..|.+.+..+| +.+.+|.||.++..
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~--~--~-~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDD--G--K-LLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT--S--C-EEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--C--c-EEEEEecCCCCceeEEEcCEEEECccc
Confidence 345778899999999999999999999987652 3 3 34666432222 37899999999875
No 135
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.76 E-value=0.11 Score=47.31 Aligned_cols=61 Identities=13% Similarity=0.036 Sum_probs=44.3
Q ss_pred cchHHHHHHHHH-CCcEEEcCceeeEEEeccCCC-----CcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAAN-----AETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~-----~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+.+.|.+.+++ .|++|+.+++|++|..+++ + + ++.||.+.+..+|+ .+.||.||+|+.-.
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~--~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTR--RVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSC--BEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCC--EEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 466778888888 7999999999999998431 1 1 57888775323565 68899999998754
No 136
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.72 E-value=0.11 Score=43.02 Aligned_cols=56 Identities=7% Similarity=0.108 Sum_probs=42.4
Q ss_pred hHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec--CCCeEEecCEEEEcCChh
Q 026733 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~--~~g~~~~aD~VV~a~~~~ 111 (234)
.+...+.+++.|++++++++|++|..++ .+.+|.+.+. ++++.+.+|.||.+++..
T Consensus 192 ~~~~~~~l~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 192 HEHSVENLHASKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp CHHHHHHHHHSSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred cHHHHHHHhcCCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 3566777899999999999999998764 2456766531 225678999999998753
No 137
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=93.71 E-value=0.19 Score=45.20 Aligned_cols=64 Identities=8% Similarity=0.100 Sum_probs=47.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+++++|++|..+++ .++ |.+.+ .+| +++.||.||.+-... .+++.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-----~v~-v~~~~-~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGD-----HVV-VEVEG-PDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSS-----CEE-EEEEC-SSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-----EEE-EEEEc-CCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 4677788888999999999999999998763 343 65541 112 278999999998876 4677764
No 138
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=93.70 E-value=0.18 Score=45.38 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=47.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+++++|++|..++ + .++ |.+.+ .+| +++.||.||.+-... .+++.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~---~--~v~-v~~~~-~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG---A--GVT-VEVRG-PEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET---T--EEE-EEEEE-TTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC---C--eEE-EEEEc-CCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 456778888899999999999999999876 3 343 55542 112 378999999998876 4666664
No 139
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=93.68 E-value=0.11 Score=46.47 Aligned_cols=56 Identities=20% Similarity=0.070 Sum_probs=44.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.|.+.+++.|++|+.+++| +|..++ + ++.||.+.+ ++..+.+|.||.|....
T Consensus 120 ~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~---~--~v~Gv~v~~--~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 120 EIFNFLLKLAREEGIPIIEDRLV-EIRVKD---G--KVTGFVTEK--RGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHTTCCEECCCEE-EEEEET---T--EEEEEEETT--TEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEE-EEEEeC---C--EEEEEEEEe--CCCeEEeeeEEECCCCC
Confidence 56788888888899999999999 998876 5 788887631 23346799999998754
No 140
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.67 E-value=0.18 Score=45.77 Aligned_cols=56 Identities=20% Similarity=0.323 Sum_probs=44.4
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEec------------------cCCCCcceEEEEEEeecCCCeEEecCEEEEcC
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYD------------------KAANAETYVKGLAMSKATDKKVVQADAYVAAC 108 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~------------------~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~ 108 (234)
..+.+.+.+.+++.|++|+++++|++|..+ .+ + ++ .+.+ .+|+.+++|.||.++
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~v~~---~~g~~i~~D~vi~a~ 263 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK--G--HL-SLTL---SNGELLETDLLIMAI 263 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT--C--EE-EEEE---TTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC--C--cE-EEEE---cCCCEEEcCEEEECc
Confidence 456778889999999999999999999873 21 3 33 3445 478899999999998
Q ss_pred Ch
Q 026733 109 DV 110 (234)
Q Consensus 109 ~~ 110 (234)
..
T Consensus 264 G~ 265 (565)
T 3ntd_A 264 GV 265 (565)
T ss_dssp CE
T ss_pred CC
Confidence 85
No 141
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=93.65 E-value=0.15 Score=45.94 Aligned_cols=67 Identities=10% Similarity=-0.016 Sum_probs=48.7
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceE--EEEEEeecCCCeEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYV--KGLAMSKATDKKVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~--~~v~~~~~~~g~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+++++|++|..+++ + ++ +.+.+.+..++.++.||.||.|.... .+++.+.
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~--~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDD--D--AGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECG--G--GCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCC--C--ccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 5677889999999999999999999998762 2 22 33444321112688999999998876 4666663
No 142
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.63 E-value=0.15 Score=43.28 Aligned_cols=65 Identities=12% Similarity=0.153 Sum_probs=49.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-HhhhC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~~~Ll 117 (234)
.+-+.|.+..++.|++++++++|+.+..++ + +++++.....+++..+.||.||-|-...+ +.+.+
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~---~--~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN---G--KVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc---c--eeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 345678888899999999999999999887 4 67777655322334688999999987753 55544
No 143
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.59 E-value=0.16 Score=43.51 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=46.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+++++|++|.. + . .|.+ .+|+.+.+|.||.|.... .+++.+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~------~--~v~~---~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V------G--RLTL---QTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T------T--EEEE---TTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C------C--EEEE---CCCCEEEcCEEEECCCccHHHHHHhc
Confidence 4578889999999999999999999976 3 2 3556 378889999999998875 4565543
No 144
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.45 E-value=0.13 Score=47.99 Aligned_cols=56 Identities=11% Similarity=0.085 Sum_probs=46.3
Q ss_pred cchHHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++ .|++| ++++|+.|..++ + ++++|.+ .+|..+.||.||.|.....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~---g--~V~GV~t---~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN---D--RVVGAVT---QMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS---S--BEEEEEE---TTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC---C--EEEEEEE---CCCCEEECCEEEEcCCCCc
Confidence 467888889988 69999 678999999876 4 7889987 4788899999999988643
No 145
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=93.44 E-value=0.14 Score=42.89 Aligned_cols=55 Identities=9% Similarity=-0.071 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|++++++++|++|..++ + ++.+|.+ .+| .+.+|.||.|....
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~--~~~~v~~---~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFG---E--RLRVVAR---DGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEET---T--EEEEEET---TSC-EEEEEEEEECCCSG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECC---C--cEEEEEe---CCC-EEEeCEEEECCCCC
Confidence 567788888899999999999999999876 3 3332554 345 88999999998853
No 146
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.16 E-value=0.11 Score=38.20 Aligned_cols=55 Identities=7% Similarity=-0.058 Sum_probs=39.6
Q ss_pred CeEEecCEEEEcCChhhHhhhCCCcccCchHHHHhhcCCCCcEEEEEEEecCccc
Q 026733 96 KKVVQADAYVAACDVPGIKRLLPSSWREMKFFNNIYALVGVPVVTVQLRYNGWVT 150 (234)
Q Consensus 96 g~~~~aD~VV~a~~~~~~~~Ll~~~~~~~~~~~~~~~l~~~~~~~v~l~~d~~~~ 150 (234)
.+.+.||+||+|+|+..++++-=....+....+.++++..-+..-+.+.|++++.
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW 57 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWW 57 (130)
T ss_dssp CEEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGG
T ss_pred ceEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCC
Confidence 3568899999999999988642111122233455778877788999999999875
No 147
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.08 E-value=0.33 Score=40.43 Aligned_cols=59 Identities=10% Similarity=0.045 Sum_probs=41.7
Q ss_pred hHHHH-HHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 50 SGPIR-KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~-~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
.+.+. +.+++.|++|+++++|++|.-+++ .+ ++.+|.+....+| +.+.+|.||.++...
T Consensus 197 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 197 SKIMQQRALSNPKIDVIWNSSVVEAYGDGE-RD--VLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp CHHHHHHHHTCTTEEEECSEEEEEEEESSS-SS--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred cHHHHHHHHhCCCeeEecCCceEEEeCCCC-cc--ceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 34555 445789999999999999987641 11 3566777532234 578999999998754
No 148
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.06 E-value=0.15 Score=47.72 Aligned_cols=56 Identities=11% Similarity=0.042 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+...+.+.++++|++|+++++|++|.-++ ..+.....++++.+++|.||.++...
T Consensus 568 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--------~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 568 FEVNRIQRRLIENGVARVTDHAVVAVGAGG--------VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp TCHHHHHHHHHHTTCEEEESEEEEEEETTE--------EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred hhHHHHHHHHHHCCCEEEcCcEEEEEECCe--------EEEEEccCCeEEEEECCEEEECCCCC
Confidence 356788999999999999999999997542 12222112356789999999998853
No 149
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.97 E-value=0.14 Score=44.96 Aligned_cols=51 Identities=8% Similarity=0.016 Sum_probs=39.1
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-cCCCeEEecCEEEEcCC
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACD 109 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~-~~~g~~~~aD~VV~a~~ 109 (234)
+.+.+.+.++++|++|+++++|++|.-+ . +.+.. .++|+++++|.||.+.+
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~-------~---v~~~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD-------K---VIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS-------E---EEEECTTSCEEEEECSEEEEECE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC-------e---EEEEecCCCceEEeeeEEEECCC
Confidence 5778899999999999999999999432 2 34431 12377899999999865
No 150
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=92.93 E-value=0.14 Score=46.55 Aligned_cols=56 Identities=7% Similarity=0.051 Sum_probs=41.5
Q ss_pred HHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EE---ecCEEEEcCChhh
Q 026733 52 PIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVPG 112 (234)
Q Consensus 52 ~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~---~aD~VV~a~~~~~ 112 (234)
.+.+.+++ .|++|++++.|++|..++ + +++||++....+|+ .+ .++.||+++....
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~---~--~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG---S--QILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET---T--EEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC---C--EEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 35555555 589999999999999986 5 89999985311353 23 7899999988643
No 151
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=92.69 E-value=0.29 Score=45.49 Aligned_cols=62 Identities=21% Similarity=0.080 Sum_probs=46.0
Q ss_pred cchHHHHHHHHHC-Cc-EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDK-GG-RFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~-Gg-~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+...+.+.+++. |+ +|+.+++|++|..+++..| +++||...+..+|+ .+.|+.||.|+.-.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g--~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPN--AVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTT--BEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccc--eeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 4667888888888 99 9999999999998751003 68888753222454 68899999987743
No 152
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.64 E-value=0.13 Score=44.22 Aligned_cols=52 Identities=19% Similarity=0.258 Sum_probs=42.0
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.+.+.+.+.+.++++|++|+++++|++|. . + +|.+ .+|+ +++|.||.++..
T Consensus 181 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~---~-----~v~~---~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 181 LDEELSNMIKDMLEETGVKFFLNSELLEAN--E---E-----GVLT---NSGF-IEGKVKICAIGI 232 (367)
T ss_dssp CCHHHHHHHHHHHHHTTEEEECSCCEEEEC--S---S-----EEEE---TTEE-EECSCEEEECCE
T ss_pred CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e---e-----EEEE---CCCE-EEcCEEEECcCC
Confidence 344577888999999999999999999996 2 2 3566 3777 999999999874
No 153
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=92.30 E-value=0.12 Score=47.40 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=49.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|++|+.+++|++|..+++ + + .|.+.. .+| +.+.||.||.|.... .+++++.
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~--~---v-~v~~~~-~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAE--A---V-EVTVAG-PSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSS--C---E-EEEEEE-TTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--e---E-EEEEEe-CCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4577888888889999999999999998763 3 3 354421 366 689999999998865 4666664
No 154
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.18 E-value=0.33 Score=39.96 Aligned_cols=57 Identities=9% Similarity=0.128 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|++++.+++|+.|..+.+ ++ ..+.|.+ .+|+.+.+|.+|.|...
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~-~~--~~~~v~~---~~g~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAV-EG--GLHQIET---ASGAVLKARSIIVATGA 113 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--CCEEEEE---TTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEeccc-CC--ceEEEEE---CCCCEEEeCEEEECcCC
Confidence 4667788888899999999999999987531 11 2355666 47778999999999875
No 155
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=92.16 E-value=0.45 Score=41.76 Aligned_cols=46 Identities=17% Similarity=0.038 Sum_probs=34.8
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.|++|+++++|++|..++ + .+.|.+....+|+ .+++|.||.++...
T Consensus 329 ~~v~i~~~~~v~~v~~~~---~---~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA---Q---GIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET---T---EEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC---C---EEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 699999999999998765 3 2456664333555 48899999998864
No 156
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=92.12 E-value=0.16 Score=45.59 Aligned_cols=62 Identities=10% Similarity=-0.099 Sum_probs=44.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~~ 112 (234)
.+.+.|.+.+++.|++|+++++|++|..+++ ++ ..+.|.+....+| +.+.||.||.|.....
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPR-KG--SGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCS-TT--CCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecC-CC--CEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 4567888888999999999999999987521 12 3355665311145 4789999999988754
No 157
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=92.11 E-value=0.26 Score=46.14 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=46.7
Q ss_pred cchHHHHHHHHHC--CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDK--GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~--Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
.+...|.+.++++ |++|+.++.|.+|..+++..| ++.||......+|+ .+.|++||+|+.-
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g--~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPN--RIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTT--BEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccc--eEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 5678888988888 999999999999998751013 78998764323443 5889999999774
No 158
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=92.07 E-value=0.2 Score=41.96 Aligned_cols=55 Identities=13% Similarity=0.068 Sum_probs=39.5
Q ss_pred HHHH-HHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 51 GPIR-KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 51 ~~l~-~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
+.+. +.+++.|++++++++|++|.-++ ++.+|.+....+| +.+++|.||.+++..
T Consensus 194 ~~~~~~~~~~~gV~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 194 KIMLDRARNNDKIRFLTNHTVVAVDGDT------TVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp TTHHHHHHHCTTEEEECSEEEEEEECSS------SCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred HHHHHHHhccCCcEEEeCceeEEEecCC------cEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 3444 44577999999999999997654 3456766421234 678999999998753
No 159
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=91.87 E-value=0.28 Score=42.99 Aligned_cols=53 Identities=8% Similarity=0.003 Sum_probs=38.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-cCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-ATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~-~~~g~~~~aD~VV~a~~~ 110 (234)
...+.+.+.++++|+++++|++|++|.-+ + +.+.. .++++++++|.||.+++.
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~~-------~---~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEPD-------K---VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECSS-------E---EEEECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeCC-------c---eEEEeeCCCceEeecceEEEeccC
Confidence 34566888899999999999999998432 2 22321 123568999999999774
No 160
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=91.85 E-value=0.46 Score=42.84 Aligned_cols=55 Identities=15% Similarity=0.107 Sum_probs=42.5
Q ss_pred HHHHHHHHH-CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 51 GPIRKYITD-KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
+.+.+.+++ .|++|+++++|++|.-++ + ++.+|.+....+|+ .+.+|.||.+++.
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~~---~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGDG---S--KVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEECS---S--SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcCC---C--cEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 457777887 699999999999998764 4 67788876322353 6889999999774
No 161
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.82 E-value=0.3 Score=44.47 Aligned_cols=56 Identities=9% Similarity=-0.029 Sum_probs=45.3
Q ss_pred cchHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|. +++++++|+++..+++ + ..+.|.+ .+|+++.+|.||+|+..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~w~V~~---~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE--G--LRWTVRT---DRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT--T--TEEEEEE---TTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC--C--CEEEEEE---CCCCEEEeCEEEECcCC
Confidence 456677788888997 8999999999998763 3 3566776 48888999999999884
No 162
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.80 E-value=0.3 Score=44.42 Aligned_cols=56 Identities=13% Similarity=0.081 Sum_probs=45.3
Q ss_pred cchHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|. +|+++++|+++..+++ + +.+.|.+ .+|+.+.+|.||+|+..
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~--~--~~~~V~~---~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD--E--NLWEVTT---DHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT--T--TEEEEEE---TTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC--C--CEEEEEE---cCCCEEEeCEEEECCcc
Confidence 456677888888998 8999999999998763 3 3566766 47888999999999885
No 163
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=91.77 E-value=0.21 Score=46.30 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=53.3
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChhh-HhhhCCCcccC--------chH--
Q 026733 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVPG-IKRLLPSSWRE--------MKF-- 126 (234)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~~-~~~Ll~~~~~~--------~~~-- 126 (234)
.|++|++++.|++|..+++ ++ +++||++.+..+|+ .+.||.||+++.... .+-|....... .+.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~-~~--~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~~l 349 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNAL-NS--EIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPELL 349 (623)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--CEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCSSC
T ss_pred CCEEEEeCCEEEEEEEECC-CC--EEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCCCC
Confidence 4899999999999999752 13 79999986422444 678999999988643 33332221110 000
Q ss_pred HHHhhcCCCCcEEEEEEEecCc
Q 026733 127 FNNIYALVGVPVVTVQLRYNGW 148 (234)
Q Consensus 127 ~~~~~~l~~~~~~~v~l~~d~~ 148 (234)
-.--++|..++.+.+.+.++.+
T Consensus 350 ~~vG~nl~dh~~~~~~~~~~~~ 371 (623)
T 3pl8_A 350 PSLGSYITEQSLVFCQTVMSTE 371 (623)
T ss_dssp TTTTBSCBCCCEEEEEEEECHH
T ss_pred cccccchhhCcCceEEEEECCc
Confidence 0011345555777777777754
No 164
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.64 E-value=0.38 Score=40.64 Aligned_cols=55 Identities=9% Similarity=-0.058 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|++++++++|++|..+++ + .+.|.+ .+|+.+.+|.||.|...
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~---~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLDD--G---TFETRT---NTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECTT--S---CEEEEE---TTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECCC--c---eEEEEE---CCCcEEEeeEEEEccCC
Confidence 5677888888899999999999999998752 2 345655 47778999999999875
No 165
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=91.53 E-value=0.22 Score=43.15 Aligned_cols=52 Identities=4% Similarity=-0.061 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.....+.+++.|++++++++|++|..++ + .|.+ .+|+.+.+|++|+|+..
T Consensus 63 ~l~~~~~~~~~~~~i~~~~~~~V~~id~~~---~-----~v~~---~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 63 DILIKKNDWYEKNNIKVITSEFATSIDPNN---K-----LVTL---KSGEKIKYEKLIIASGS 114 (385)
T ss_dssp GTBSSCHHHHHHTTCEEECSCCEEEEETTT---T-----EEEE---TTSCEEECSEEEECCCE
T ss_pred HccCCCHHHHHHCCCEEEeCCEEEEEECCC---C-----EEEE---CCCCEEECCEEEEecCC
Confidence 344456777889999999999999998875 2 3556 48889999999999875
No 166
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=91.53 E-value=0.29 Score=43.08 Aligned_cols=55 Identities=13% Similarity=0.090 Sum_probs=43.7
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+.+.++++ ++++++++|++|.-++ ++..+.. +|+.+++|.||.++..
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~------~v~~v~~----~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE------RVEKVVT----DAGEYKAELVILATGI 242 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS------SCCEEEE----TTEEEECSEEEECSCE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC------cEEEEEe----CCCEEECCEEEEeeCC
Confidence 4446778888999999 9999999999997653 3444533 7889999999999875
No 167
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=91.53 E-value=0.41 Score=40.39 Aligned_cols=54 Identities=15% Similarity=-0.041 Sum_probs=41.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|++|+++++|++|..+++ + +.|.+ .+| .+.+|+||.|+...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~--~----~~v~~---~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDA--Y----YTIAT---TTE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSS--S----EEEEE---SSC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCC--e----EEEEe---CCC-EEEeCEEEECCCCC
Confidence 3556677788889999999999999988752 2 34554 244 58899999998764
No 168
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.07 E-value=0.32 Score=43.03 Aligned_cols=55 Identities=16% Similarity=0.102 Sum_probs=42.4
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.++++|++|+++++|++|.. + + ..+.. .+| +.+++|.||.++...
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~------~-v~v~~---~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 211 DSELTAPVAESLKKLGIALHLGHSVEGYEN-G------C-LLAND---GKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T------E-EEEEC---SSSCCCEECCSCEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C------C-EEEEE---CCCceEEEECCEEEECcCCC
Confidence 345778889999999999999999999975 3 3 22331 245 688999999998853
No 169
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.05 E-value=0.5 Score=40.69 Aligned_cols=57 Identities=16% Similarity=0.154 Sum_probs=41.2
Q ss_pred HHHHHHHH--CCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-HhhhC
Q 026733 52 PIRKYITD--KGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (234)
Q Consensus 52 ~l~~~l~~--~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~~~Ll 117 (234)
.+.+.|.+ .|++|+++++|++|..+++ ++ .|.+ .+|+.+.+|.||.|..... +++.+
T Consensus 100 ~l~~~L~~~~~~~~i~~~~~v~~i~~~~~-----~v-~v~~---~~g~~~~ad~vV~AdG~~S~vr~~~ 159 (397)
T 2vou_A 100 SIYGGLYELFGPERYHTSKCLVGLSQDSE-----TV-QMRF---SDGTKAEANWVIGADGGASVVRKRL 159 (397)
T ss_dssp HHHHHHHHHHCSTTEETTCCEEEEEECSS-----CE-EEEE---TTSCEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHhCCCcEEEcCCEEEEEEecCC-----EE-EEEE---CCCCEEECCEEEECCCcchhHHHHh
Confidence 34444443 4899999999999998763 33 3666 4788899999999988753 55544
No 170
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.01 E-value=0.33 Score=40.10 Aligned_cols=55 Identities=7% Similarity=0.056 Sum_probs=43.9
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.+.+.+.+.+++.|++++++++|++|..+++ + .+.|.+ .+|+ +.+|+||.|+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~---~~~v~~---~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQAD--G---VFKLVT---NEET-HYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTT--S---CEEEEE---SSEE-EEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCC--C---cEEEEE---CCCE-EEeCEEEECCCC
Confidence 35678888888899999999999999998762 2 355666 3555 899999999876
No 171
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=90.98 E-value=0.44 Score=38.64 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=41.5
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|++|+. ++|++|.-+ . +|.+ .+|+.+++|.||.+++..
T Consensus 175 ~~~~~~~~~l~~~gv~i~~-~~v~~i~~~-------~--~v~~---~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 175 EPDADQHALLAARGVRVET-TRIREIAGH-------A--DVVL---ADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp CCCHHHHHHHHHTTCEEEC-SCEEEEETT-------E--EEEE---TTSCEEEESEEEECCEEE
T ss_pred CCCHHHHHHHHHCCcEEEc-ceeeeeecC-------C--eEEe---CCCCEEEEEEEEEccCcc
Confidence 5778899999999999995 999998543 2 4666 488899999999998643
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.97 E-value=0.45 Score=39.58 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=42.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|.+++++++|++|..++ + .+.|.+ .+|+.+.+|.||.|...
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~---~---~~~v~~---~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREG---D---LFKVTT---SQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEET---T---EEEEEE---TTSCEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECC---C---EEEEEE---CCCCEEEeCEEEECCCC
Confidence 466778888888899999999999998875 2 234555 36778999999999875
No 173
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=90.97 E-value=0.39 Score=44.76 Aligned_cols=55 Identities=13% Similarity=0.133 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+...|.+.+++. |++|+ +.+|+.|..++ + ++.||.+ .+|+.+.||.||.|....
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~---g--~V~GV~t---~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS---G--KFSSVTV---RSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET---T--EEEEEEE---TTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC---C--EEEEEEE---CCCcEEEeCEEEECcCCC
Confidence 4677888888885 99995 56999998876 4 7888887 478899999999998854
No 174
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.91 E-value=0.56 Score=41.58 Aligned_cols=59 Identities=14% Similarity=0.147 Sum_probs=43.2
Q ss_pred cchHHHHHHHHHCCcE--EEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGR--FHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~--i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|++ |+++++|++|..+++ + ..+.|.+.+..+| ..+.+|+||.|...
T Consensus 102 ~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~--~--~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 102 VLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED--S--QTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT--T--TEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC--C--CcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 4556677788888998 999999999998752 2 2456666422234 57889999999884
No 175
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=90.89 E-value=0.3 Score=42.15 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=44.7
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-HhhhC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLL 117 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~~~Ll 117 (234)
.+.+.|.+.+++ ++|+++++|++|..++ + . +.|.+ .+|+.+.||.||.|..... +++.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~---~--~-v~v~~---~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA---D--G-VTVWF---TDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET---T--E-EEEEE---TTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC---C--c-EEEEE---cCCCEEeeCEEEECCCcChHHHHHh
Confidence 355667777766 8999999999999886 3 3 34555 4888999999999988753 55544
No 176
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=90.72 E-value=0.26 Score=44.83 Aligned_cols=49 Identities=10% Similarity=0.135 Sum_probs=38.3
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecC-EEEEcCChh
Q 026733 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQAD-AYVAACDVP 111 (234)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD-~VV~a~~~~ 111 (234)
+.|++|++++.|++|.++++ + +++||++....+|+ .+.|+ .||+++...
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~--~--~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD--R--RCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT--S--BEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred CCCcEEEeCCEEEEEEECCC--C--eEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 57899999999999999862 4 89999886311153 67898 999998864
No 177
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=90.52 E-value=0.072 Score=46.07 Aligned_cols=46 Identities=9% Similarity=-0.115 Sum_probs=37.4
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.++++|++++++++|+.+..+++ + ..|++ ++|+.+++|.||.+.+.
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~--~----~~v~~---~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTE--A----MTVET---SFGETFKAAVINLIPPQ 256 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETT--T----TEEEE---TTSCEEECSEEEECCCE
T ss_pred HHHhcCcEEEeCceEEEEEeccc--c----eEEEc---CCCcEEEeeEEEEecCc
Confidence 45688999999999999988762 2 34666 58999999999999874
No 178
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.19 E-value=0.42 Score=40.33 Aligned_cols=54 Identities=9% Similarity=0.218 Sum_probs=40.7
Q ss_pred cchHHHHHHHHHCC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEe-cCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQ-ADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~G-g~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~-aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.| ++|+++++|++|..++ + ...|.+ .+|+.+. +|.||.++..
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~---~---~~~v~~---~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN---G---QYHISF---DSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET---T---EEEEEE---SSSCCEEESSCCEECCCB
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC---C---ceEEEe---cCCeEeccCCceEEeecc
Confidence 34578888889997 9999999999997654 2 245666 3676654 6999999874
No 179
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.98 E-value=0.85 Score=40.72 Aligned_cols=58 Identities=10% Similarity=-0.004 Sum_probs=44.0
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.+++. ++|+++++|++|..++ + ++. |.+.. .+| +.+++|.||.++...
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~---~--~v~-v~~~~-~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE---D--AVE-VIYFD-KSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS---S--SEE-EEEEC-TTCCEEEEEESEEEECSCCE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC---C--EEE-EEEEe-CCCceEEEECCEEEEeeCCc
Confidence 346778888888888 9999999999998876 3 333 44421 256 688999999998853
No 180
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=89.59 E-value=0.56 Score=43.43 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=49.0
Q ss_pred cchHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEee---cCCC--eEEecCEEEEcCChh-hHhhhCC
Q 026733 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSK---ATDK--KVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~---~~~g--~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
.+.+.|.+.+++.|+ +|+++++|++|..+++.++ ..+.|.+.+ ..+| +++.||+||.|-... .+++.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~--~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAAD--YPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSS--CCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCc--CCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 466788899999997 9999999999998751001 224455542 0134 578999999998876 4677765
No 181
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.58 E-value=0.52 Score=42.90 Aligned_cols=56 Identities=7% Similarity=0.080 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHCCc--EEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGG--RFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg--~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+..++.|. +|+++++|+++..+++ + +.+.|.+ .+|+.+.+|.||+|+..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~---~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN--D--RLWEVTL---DNEEVVTCRFLISATGP 145 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG--G--TEEEEEE---TTTEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC--C--CEEEEEE---CCCCEEEeCEEEECcCC
Confidence 466777778888887 8999999999998763 3 3566776 48889999999999884
No 182
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.51 E-value=0.69 Score=41.68 Aligned_cols=57 Identities=11% Similarity=0.148 Sum_probs=44.2
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|++++.+++|++|..+.+ ++ ..+.|.+ .+|+.+.+|.||.|...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~-~~--~~~~V~~---~~g~~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAAT-EG--GLHQIET---ASGAVLKARSIIIATGA 324 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSS-TT--SCEEEEE---TTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccC-CC--ceEEEEE---CCCCEEEcCEEEECCCC
Confidence 4677888889999999999999999986421 11 2355666 47888999999999875
No 183
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=89.17 E-value=2.4 Score=38.01 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=42.2
Q ss_pred cccchHHHHHHHHHCCcEEEcCceeeEEEeccC-CCCcceEEEEEEeecCCC-e--EEecCEEEEcCChh
Q 026733 46 DVYLSGPIRKYITDKGGRFHLRWGCREILYDKA-ANAETYVKGLAMSKATDK-K--VVQADAYVAACDVP 111 (234)
Q Consensus 46 ~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~-~~~~~~~~~v~~~~~~~g-~--~~~aD~VV~a~~~~ 111 (234)
...+.+.+.+.++++|++|+++++|++|...++ .++ . ..|.+.. .+| + .+++|.||.++...
T Consensus 249 d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~--~-~~v~~~~-~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 249 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPG--R-LRVVAQS-TNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTC--E-EEEEEEE-SSSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCc--e-EEEEEEE-CCCcEEEEEECCEEEEecCCc
Confidence 446788889999999999999999888875331 002 2 2233322 234 2 56799999998853
No 184
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=88.93 E-value=0.63 Score=40.76 Aligned_cols=52 Identities=8% Similarity=0.002 Sum_probs=37.8
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC-----CeEEecCEEEEcCC
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-----KKVVQADAYVAACD 109 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~-----g~~~~aD~VV~a~~ 109 (234)
..+.+.+.++++|++++++++|++|.-+ +++ +... ..+ ++++.+|.||.+.+
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~~-------~v~-~~~~-~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVEDN-------KMY-VTQV-DEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEETT-------EEE-EEEE-CTTSCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEECC-------eEE-EEec-ccCCccccceEEEEeEEEEcCC
Confidence 5678889999999999999999999532 221 1111 112 56789999999865
No 185
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=88.89 E-value=1 Score=38.92 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=44.2
Q ss_pred cchHHHHHHHHH-CC-cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh-hHhhhC
Q 026733 48 YLSGPIRKYITD-KG-GRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP-GIKRLL 117 (234)
Q Consensus 48 ~l~~~l~~~l~~-~G-g~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~-~~~~Ll 117 (234)
.+.+.|.+.+++ .| ++|+++++|++|.. ++ + + .|.+.+..+| +.+.||.||.|.... .+++.+
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~--~---v-~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RD--G---R-VLIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET--T---E-EEEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC--c---c-EEEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 355677788776 37 48999999999988 52 3 3 3555421136 578999999998875 466644
No 186
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=88.85 E-value=0.79 Score=40.21 Aligned_cols=58 Identities=10% Similarity=-0.126 Sum_probs=41.7
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe---EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK---VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~---~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+..++.+..|+++++|++|..++ + .+.|.+.+..+|+ .+.+|+||.|....
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~---~---~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD---G---SWVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET---T---EEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC---C---eEEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 345666677777788999999999998765 3 2456664212365 78999999998763
No 187
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=88.83 E-value=0.67 Score=38.24 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=42.4
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACD 109 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~ 109 (234)
.+.+.+.+.+++.|++++.++ |+.+..++ + ++.+|++ .+|+.+.+|.+|.++.
T Consensus 181 ~~~~~~~~~l~~~g~~~~~~~-v~~~~~~~---~--~~~~v~~---~~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 181 ELSQTIMDELSNKNIPVITES-IRTLQGEG---G--YLKKVEF---HSGLRIERAGGFIVPT 233 (304)
T ss_dssp CCCHHHHHHHHTTTCCEECSC-EEEEESGG---G--CCCEEEE---TTSCEECCCEEEECCE
T ss_pred cchhhhhhhhhccceeEeeee-EEEeecCC---C--eeeeeec---cccceeeecceeeeec
Confidence 467889999999999999875 78887765 4 6788888 4888999998877643
No 188
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=88.80 E-value=0.43 Score=39.53 Aligned_cols=57 Identities=18% Similarity=0.062 Sum_probs=43.1
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
..+.+.+.+.+++.|+++++++ |++|..++ + . +.+.+....++..+.+|.||.|...
T Consensus 84 ~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~---~--~-~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 84 SELMDRMREQSTKFGTEIITET-VSKVDLSS---K--P-FKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEECSC-EEEEECSS---S--S-EEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC---C--E-EEEEEEecCCCcEEEeCEEEECcCC
Confidence 3577888999999999999999 99998876 2 2 3343321236678899999999775
No 189
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=88.78 E-value=0.74 Score=37.71 Aligned_cols=54 Identities=15% Similarity=-0.045 Sum_probs=42.4
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|+++++ ++|++|..++ + .+.|.+ .+|+.+.+|.||.|+...
T Consensus 71 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~---~~~v~~---~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEVPVLL-DIVEKIENRG---D---EFVVKT---KRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHTTTCCEEE-SCEEEEEEC--------CEEEEE---SSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEecC---C---EEEEEE---CCCCEEEcCEEEECcCCC
Confidence 5677888888999999999 9999998875 2 244655 367889999999998754
No 190
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.62 E-value=1 Score=36.95 Aligned_cols=53 Identities=11% Similarity=0.060 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|+++++ ++|++|..++ + . +.|.+ .+|+.+.+|.||.|...
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~---~--~-~~v~~---~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKKD---S--H-FVILA---EDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEET---T--E-EEEEE---TTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEcC---C--E-EEEEE---cCCCEEECCEEEECCCC
Confidence 5677788888899999998 8999998875 2 2 34555 47788999999999874
No 191
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=88.48 E-value=0.37 Score=41.51 Aligned_cols=49 Identities=12% Similarity=0.045 Sum_probs=37.6
Q ss_pred CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-HhhhCC
Q 026733 61 GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRLLP 118 (234)
Q Consensus 61 Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~~~Ll~ 118 (234)
+++|+++++|++|..+++ + +.|.+ .+|+.+.||.||.|..... +++.+.
T Consensus 140 ~~~i~~~~~v~~i~~~~~--~----v~v~~---~~g~~~~ad~vV~AdG~~S~vR~~l~ 189 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKK--K----WTLTF---ENKPSETADLVILANGGMSKVRKFVT 189 (398)
T ss_dssp TTSEEESCCEEEEEECSS--S----EEEEE---TTSCCEEESEEEECSCTTCSCCTTTC
T ss_pred CCEEEECCEEEEEEECCC--E----EEEEE---CCCcEEecCEEEECCCcchhHHhhcc
Confidence 378999999999998762 3 34666 4788899999999988764 566654
No 192
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=88.01 E-value=1 Score=37.32 Aligned_cols=53 Identities=21% Similarity=0.155 Sum_probs=41.8
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|+++++++ |++|..++ + . +.|.+ +|+.+.+|.||.|....
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~---~--~-~~v~~----~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSS---K--P-FKLFT----DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSS---S--S-EEEEC----SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcC---C--E-EEEEE----CCcEEEcCEEEECCCCC
Confidence 567788888999999999997 99998765 2 2 33443 67889999999998754
No 193
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=87.91 E-value=0.5 Score=43.50 Aligned_cols=51 Identities=10% Similarity=0.050 Sum_probs=36.3
Q ss_pred HHCCcEEEcCceeeEEEeccCC-CCcceEEEEEEeecCCCe--EEecC-EEEEcCChh
Q 026733 58 TDKGGRFHLRWGCREILYDKAA-NAETYVKGLAMSKATDKK--VVQAD-AYVAACDVP 111 (234)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~-~~~~~~~~v~~~~~~~g~--~~~aD-~VV~a~~~~ 111 (234)
++.+.+|++++.|++|.++++. ++ +++||++.. .+|+ .+.|. .||+++..-
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~--ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~ 292 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTP--RAVGVEFGT-HKGNTHNVYAKHEVLLAAGSA 292 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSC--EEEEEEEES-STTCEEEEEEEEEEEECSCTT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCC--EEEEEEEEe-cCCcEEEEEECCEEEEeCCcc
Confidence 4678999999999999998300 14 899999852 1443 46676 577777643
No 194
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=87.47 E-value=1.1 Score=40.55 Aligned_cols=56 Identities=9% Similarity=0.013 Sum_probs=41.1
Q ss_pred chHHHHHHHHHCC--cEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 49 LSGPIRKYITDKG--GRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 49 l~~~l~~~l~~~G--g~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+.+-+.+..++.| .+|+++++|+++..+++ + ..+.|.+ .+|+.+.||.||+|....
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~--~--~~w~V~~---~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEA--T--NTWTVDT---NHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETT--T--TEEEEEE---TTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC--C--CeEEEEE---CCCCEEEeCEEEECcCCC
Confidence 3444555556665 68999999999998752 2 3456766 478889999999998854
No 195
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=87.32 E-value=1.6 Score=40.63 Aligned_cols=52 Identities=13% Similarity=0.068 Sum_probs=39.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
.....+.+.++++|++++++++|++|. + + . +.+. .+| +.+++|.||.++...
T Consensus 574 ~~~~~~~~~l~~~GV~v~~~~~v~~i~--~---~--~---v~~~--~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 574 TTGWIHRTTLLSRGVKMIPGVSYQKID--D---D--G---LHVV--INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TTHHHHHHHHHHTTCEEECSCEEEEEE--T---T--E---EEEE--ETTEEEEECCSEEEECCCEE
T ss_pred ccHHHHHHHHHhcCCEEEeCcEEEEEe--C---C--e---EEEe--cCCeEEEEeCCEEEECCCcc
Confidence 344567888999999999999999986 3 2 2 3331 166 578999999998864
No 196
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=86.81 E-value=1 Score=43.92 Aligned_cols=53 Identities=9% Similarity=0.016 Sum_probs=40.9
Q ss_pred HHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee--cC--CC--eEEecCEEEEcCCh
Q 026733 54 RKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--AT--DK--KVVQADAYVAACDV 110 (234)
Q Consensus 54 ~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~--~~--~g--~~~~aD~VV~a~~~ 110 (234)
.+.++++|++|++++.|++|.-+++ + ++.+|.+.. .. +| +.+++|.||.++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~--~--~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN--G--ELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT--S--CEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC--C--CEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 6788999999999999999987411 3 677888752 00 14 67899999999884
No 197
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=86.47 E-value=0.48 Score=42.09 Aligned_cols=52 Identities=19% Similarity=0.147 Sum_probs=37.1
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee-----------------cCCCeEEecCEEEEcCCh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK-----------------ATDKKVVQADAYVAACDV 110 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~-----------------~~~g~~~~aD~VV~a~~~ 110 (234)
-.+.+++.|+++++++.+++|.-+ | ++++|++.. +++++++++|.||.++..
T Consensus 308 e~~~~~~~Gv~~~~~~~~~~i~~~----g--~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 308 EVAHAEEEGVEFIWQAAPEGFTGD----T--VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHHTTCEEECCSSSCCEEEE----E--EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHCCCEEEeCCCceEEeCC----C--cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 356788999999999999999743 3 555544421 012247889999999875
No 198
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=86.37 E-value=2.7 Score=35.67 Aligned_cols=64 Identities=8% Similarity=0.115 Sum_probs=45.2
Q ss_pred cchHHHHHHHHHC-CcEEEcCceeeEEEeccCCC-CcceEEEEEEee-----------cCCCeEEec-------------
Q 026733 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAAN-AETYVKGLAMSK-----------ATDKKVVQA------------- 101 (234)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~-~~~~~~~v~~~~-----------~~~g~~~~a------------- 101 (234)
.+...|.+.+++. |++++.+++|++|..+++.+ |..+|.||.+.. ..++..+.|
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~ 226 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQ 226 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSST
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccc
Confidence 3567788888885 99999999999999873100 101688887631 014467889
Q ss_pred --CEEEEcCChh
Q 026733 102 --DAYVAACDVP 111 (234)
Q Consensus 102 --D~VV~a~~~~ 111 (234)
|.||.|....
T Consensus 227 ~~~~VV~ATG~~ 238 (326)
T 2gjc_A 227 KHGVILSTTGHD 238 (326)
T ss_dssp TCCEEEECCCCC
T ss_pred cCCEEEECcCCC
Confidence 9999998865
No 199
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=85.54 E-value=1.3 Score=38.81 Aligned_cols=58 Identities=12% Similarity=-0.022 Sum_probs=38.9
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe----EEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~----~~~aD~VV~a~~~ 110 (234)
+.+-+....++.|++|+++++|++|..+++ ++ +.+.+.+.. .+|+ .+.+|.||.|+..
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-~~--~~~~~~V~~-~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLS-AG--QVEALRVIS-RNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEE-TT--EEEEEEEEE-EETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecC-CC--ceEEEEEEE-ecCCCceEEEEeCEEEECCCC
Confidence 445555666677999999999999998731 12 454333321 1333 7899999999774
No 200
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=85.32 E-value=1.6 Score=35.83 Aligned_cols=52 Identities=13% Similarity=0.059 Sum_probs=40.6
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|+++++++ |+.|..++ + . +.| +. +|+.+.+|.+|.|...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~---~--~-~~v-~~---~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 63 LLMERMHEHATKFETEIIFDH-INKVDLQN---R--P-FRL-NG---DNGEYTCDALIIATGA 114 (320)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSS---S--S-EEE-EE---SSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHCCCEEEEee-eeEEEecC---C--E-EEE-Ee---CCCEEEcCEEEECCCC
Confidence 567778888999999999997 99998765 2 2 334 42 7788999999999774
No 201
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=85.23 E-value=1.5 Score=36.23 Aligned_cols=55 Identities=11% Similarity=0.010 Sum_probs=42.1
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEec--cCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYD--KAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~--~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++.|++++. .+|++|..+ + + ..+.|.+. +|+.+.+|+||.|....
T Consensus 66 ~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~---~--~~~~v~~~---~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 66 ELAQRMHQQAEKFGAKVEM-DEVQGVQHDATS---H--PYPFTVRG---YNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCEEEEEECTTS---S--SCCEEEEE---SSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEe-eeEEEEEeccCC---C--ceEEEEEC---CCCEEEeCEEEECcCCC
Confidence 5677788889999999998 689999887 4 2 22345553 77889999999998753
No 202
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.20 E-value=1.8 Score=42.52 Aligned_cols=55 Identities=9% Similarity=0.098 Sum_probs=41.1
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee---cCCC---------eEEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK---ATDK---------KVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~---~~~g---------~~~~aD~VV~a~~~ 110 (234)
+.-.+.+++.|++|++++.+++|..++ + ++++|++.. ..+| +.+++|.||.++..
T Consensus 374 ~~e~~~~~~~Gv~~~~~~~~~~i~~~~---g--~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 374 PEEVELAKEEKCEFLPFLSPRKVIVKG---G--RIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEEEET---T--EEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHHHcCCEEEeCCCceEEEccC---C--eEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 444577889999999999999998754 5 788876631 1122 36889999999865
No 203
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=84.63 E-value=4.6 Score=36.71 Aligned_cols=63 Identities=16% Similarity=0.113 Sum_probs=41.5
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEEEec------cCCCCcceEEEEEEeecCCCeEEe--cCEEEEcCChh
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREILYD------KAANAETYVKGLAMSKATDKKVVQ--ADAYVAACDVP 111 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~------~~~~~~~~~~~v~~~~~~~g~~~~--aD~VV~a~~~~ 111 (234)
+.+.+.+.+.+.++++|++|++++.+++|... ++..+ ++. +.+.. .+|+.+. +|.||.++...
T Consensus 324 ~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~--~~~-v~~~~-~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 324 FDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPG--LLL-VKGHY-TDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCC--EEE-EEEEE-TTSCEEEEEESEEEECSCEE
T ss_pred CCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCc--eEE-EEEEe-CCCcEEeccCCEEEEEeCCc
Confidence 33457788889999999999999988888532 10012 221 22211 3666555 99999998853
No 204
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=83.86 E-value=1.5 Score=36.58 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=40.3
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEE-EEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGL-AMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v-~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|+++++++ |.+|.. + + . +.| .+ .+|+.+.+|.||.|...
T Consensus 72 ~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~---~--~-~~v~~~---~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 72 ELMDEMREQALRFGADLRMED-VESVSL-H---G--P-LKSVVT---ADGQTHRARAVILAMGA 124 (335)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEEC-S---S--S-SEEEEE---TTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEEee-EEEEEe-C---C--c-EEEEEe---CCCCEEEeCEEEECCCC
Confidence 567778888889999999998 999987 3 2 1 234 44 47778999999999774
No 205
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=83.85 E-value=3.3 Score=35.45 Aligned_cols=64 Identities=8% Similarity=0.157 Sum_probs=45.6
Q ss_pred cchHHHHHHHHH-CCcEEEcCceeeEEEeccC--------------CCCcceEEEEEEee---cC--------CCeEEec
Q 026733 48 YLSGPIRKYITD-KGGRFHLRWGCREILYDKA--------------ANAETYVKGLAMSK---AT--------DKKVVQA 101 (234)
Q Consensus 48 ~l~~~l~~~l~~-~Gg~i~~~~~V~~i~~~~~--------------~~~~~~~~~v~~~~---~~--------~g~~~~a 101 (234)
.+.+.|.+.+++ .|++|+.+++|++|..+++ .+|..++.||.+.. .. +...+.|
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A 240 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA 240 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc
Confidence 456788888888 5999999999999998751 00101678887631 01 3357899
Q ss_pred CEEEEcCChh
Q 026733 102 DAYVAACDVP 111 (234)
Q Consensus 102 D~VV~a~~~~ 111 (234)
++||.|....
T Consensus 241 k~VV~ATG~~ 250 (344)
T 3jsk_A 241 PVIISTTGHD 250 (344)
T ss_dssp SEEEECCCSS
T ss_pred CEEEECCCCC
Confidence 9999998865
No 206
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=83.55 E-value=2.3 Score=37.11 Aligned_cols=47 Identities=13% Similarity=0.058 Sum_probs=37.9
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
..+.+++.|++++++++|+.|..++ + .|.+ .+|+.+.+|.+|.|+..
T Consensus 66 ~~~~~~~~gv~~~~~~~v~~i~~~~---~-----~v~~---~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 66 TPDAYAAQNIQLLGGTQVTAINRDR---Q-----QVIL---SDGRALDYDRLVLATGG 112 (431)
T ss_dssp CHHHHHHTTEEEECSCCEEEEETTT---T-----EEEE---TTSCEEECSEEEECCCE
T ss_pred CHHHHHhCCCEEEeCCEEEEEECCC---C-----EEEE---CCCCEEECCEEEEcCCC
Confidence 3567788999999999999998764 2 3556 37888999999999875
No 207
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=83.38 E-value=1.3 Score=40.62 Aligned_cols=50 Identities=12% Similarity=0.096 Sum_probs=36.3
Q ss_pred HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEec-CEEEEcCChh
Q 026733 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQA-DAYVAACDVP 111 (234)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~a-D~VV~a~~~~ 111 (234)
++.+.+|++++.|++|.++++ ++ +++||++... +|+ .+.| ..||+++..-
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~-~~--~a~GV~~~~~-~g~~~~v~A~keVILsaGa~ 269 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEA-DR--TCKGVTVVTA-AGNELNFFADREVILSQGVF 269 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETT-TT--EEEEEEEEET-TSCEEEEEEEEEEEECSHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCC-CC--EEEEEEEEeC-CCcEEEEEeeeEEEEccccc
Confidence 346889999999999999831 15 8999998642 254 4567 3688887753
No 208
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=82.93 E-value=0.91 Score=41.56 Aligned_cols=50 Identities=8% Similarity=0.071 Sum_probs=36.9
Q ss_pred HHCCcEEEcCceeeEEEec----cCCCCcceEEEEEEeecCCC---eEEec-CEEEEcCChhh
Q 026733 58 TDKGGRFHLRWGCREILYD----KAANAETYVKGLAMSKATDK---KVVQA-DAYVAACDVPG 112 (234)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~----~~~~~~~~~~~v~~~~~~~g---~~~~a-D~VV~a~~~~~ 112 (234)
.+.+.+|++++.|++|.++ ++ + +++||++... +| ..+.| .-||+++..-.
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~--~--rA~GVe~~~~-~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGL--P--AFRCVEYAEQ-EGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTE--E--ECCEEEEESS-TTSCCEEEEEEEEEEECCHHHH
T ss_pred cCCCeEEECCCEEEEEEeecCCCCC--C--EEEEEEEEEC-CCceEEEEEeeeEEEEecCCcC
Confidence 4678999999999999998 31 3 8999998631 23 35667 57888877543
No 209
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=82.77 E-value=1.7 Score=39.38 Aligned_cols=56 Identities=7% Similarity=0.123 Sum_probs=39.9
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EE---ecCEEEEcCChh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VV---QADAYVAACDVP 111 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~---~aD~VV~a~~~~ 111 (234)
+.+..++.|++|++++.|++|.++++.++ +++||++.. .+|+ .+ .++.||+++..-
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~--~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~ 260 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGL--TATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTI 260 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSC--BEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCC--EEEEEEEEe-CCCceEEEEeccCCEEEEcCccc
Confidence 33344678999999999999999852013 799998853 2454 34 568999998864
No 210
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=82.59 E-value=2.7 Score=34.56 Aligned_cols=52 Identities=8% Similarity=-0.054 Sum_probs=40.4
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|++++. .+|++|..++ + . +.|.+ +++.+.+|.||.|...
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~---~--~-~~v~~----~~~~~~~~~li~AtG~ 124 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ---G--G-FDIET----NDDTYHAKYVIITTGT 124 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET---T--E-EEEEE----SSSEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC---C--E-EEEEE----CCCEEEeCEEEECCCC
Confidence 4667788888899999999 7999998875 2 2 33544 5678899999999875
No 211
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=82.33 E-value=2.7 Score=37.96 Aligned_cols=61 Identities=13% Similarity=0.150 Sum_probs=42.6
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh-hHhhhCC
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP-GIKRLLP 118 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~-~~~~Ll~ 118 (234)
+-+.|.+.+++. |+++++|++|..+++ .++ |.+.+..+| +++.||+||.+.... .+++.+.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~~-----~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRDD-----HVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECSS-----CEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeCC-----EEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 445666776666 999999999998763 343 555422235 578999999998875 4666553
No 212
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=82.09 E-value=1.1 Score=39.79 Aligned_cols=55 Identities=15% Similarity=0.120 Sum_probs=38.6
Q ss_pred HHHHHHHHH------CCcEEEcCceeeEEEeccCCCCcceEEEEEEeec-------------CCC--eEEecCEEEEcCC
Q 026733 51 GPIRKYITD------KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA-------------TDK--KVVQADAYVAACD 109 (234)
Q Consensus 51 ~~l~~~l~~------~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~-------------~~g--~~~~aD~VV~a~~ 109 (234)
+.+.+.+++ +|++|++++.+.+|.-+ + ++.+|++... .+| +.+++|.||.++.
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~----~--~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G 323 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGK----R--KVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVG 323 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECS----S--SCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSC
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecC----C--cEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccc
Confidence 445555556 79999999999999754 2 4556665310 134 4689999999988
Q ss_pred hh
Q 026733 110 VP 111 (234)
Q Consensus 110 ~~ 111 (234)
..
T Consensus 324 ~~ 325 (456)
T 1lqt_A 324 YR 325 (456)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 213
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=81.87 E-value=2.1 Score=37.83 Aligned_cols=49 Identities=4% Similarity=0.070 Sum_probs=34.5
Q ss_pred CCcEEEcCceeeEEEeccCCCCcceEEEEEEeec------------CCC--eEEecCEEEEcCChh
Q 026733 60 KGGRFHLRWGCREILYDKAANAETYVKGLAMSKA------------TDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 60 ~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~------------~~g--~~~~aD~VV~a~~~~ 111 (234)
+|++|++++.+.+|.-+++ ++ ++.+|++... .+| +.+++|.||.++...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~--~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GR--RAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SS--SEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCC-Cc--eEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 8999999999999976531 11 4666665310 023 578999999998853
No 214
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=81.86 E-value=1.4 Score=39.25 Aligned_cols=52 Identities=15% Similarity=0.055 Sum_probs=38.9
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhh
Q 026733 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKR 115 (234)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~ 115 (234)
+.+.+|.+++.|++|..++ + +++||.+........+.|+.||+++..-...+
T Consensus 223 r~nl~v~~~~~v~~i~~~~---~--~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~ 274 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG---N--QVRSLEVVGRQGSAEVFADQIVLCAGALESPA 274 (526)
T ss_dssp CTTEEEECSCEEEEEEEET---T--EEEEEEEEETTEEEEEEEEEEEECSHHHHHHH
T ss_pred CCCeEEEeCCEEEEEEecC---C--eEEEEEEEecCceEEEeecceEEcccccCCcc
Confidence 3567999999999999987 5 89999886422224567899999988644333
No 215
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=81.80 E-value=1.2 Score=40.76 Aligned_cols=52 Identities=10% Similarity=0.068 Sum_probs=37.3
Q ss_pred HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEec-CEEEEcCChh
Q 026733 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQA-DAYVAACDVP 111 (234)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~a-D~VV~a~~~~ 111 (234)
++.|.+|++++.|++|.++++ +++++++||++.. .+|+ .+.| +.||+++..-
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~-~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~ 296 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQT-ASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGSA 296 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEE-TTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCTT
T ss_pred cCCCcEEEcCCEEEEEEECCC-CCCCEEEEEEEEe-CCCcEEEEEecccEEEccCCC
Confidence 467899999999999999741 1001799998752 1454 4667 7899887753
No 216
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=81.16 E-value=2.5 Score=39.71 Aligned_cols=26 Identities=8% Similarity=-0.133 Sum_probs=22.7
Q ss_pred hHHHHHHHHHCCcEEEcCceeeEEEe
Q 026733 50 SGPIRKYITDKGGRFHLRWGCREILY 75 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~ 75 (234)
...+.+.++++|++|+++++|++|.-
T Consensus 574 ~~~~~~~l~~~GV~i~~~~~v~~i~~ 599 (729)
T 1o94_A 574 YPNMMRRLHELHVEELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEET
T ss_pred HHHHHHHHHhCCCEEEcCcEEEEEEC
Confidence 45778889999999999999999963
No 217
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.84 E-value=1.6 Score=37.36 Aligned_cols=48 Identities=17% Similarity=0.117 Sum_probs=37.4
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
....+.+++.|++++++++|+.|..++ . . |. . +|+.+.+|++|.|+..
T Consensus 64 ~~~~~~~~~~~v~~~~g~~v~~id~~~---~--~---V~-~---~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 64 PYSLDWYRKRGIEIRLAEEAKLIDRGR---K--V---VI-T---EKGEVPYDTLVLATGA 111 (367)
T ss_dssp SSCHHHHHHHTEEEECSCCEEEEETTT---T--E---EE-E---SSCEEECSEEEECCCE
T ss_pred cCCHHHHHhCCcEEEECCEEEEEECCC---C--E---EE-E---CCcEEECCEEEECCCC
Confidence 345667788999999999999997764 2 2 33 2 6778999999999874
No 218
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=80.83 E-value=2.8 Score=36.25 Aligned_cols=48 Identities=13% Similarity=0.060 Sum_probs=38.4
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
..+.+++.|++++++++|+.|..++ . .|.+ .+|+.+.+|++|.|+...
T Consensus 63 ~~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~---~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 63 EADWYGEARIDMLTGPEVTALDVQT---R-----TISL---DDGTTLSADAIVIATGSR 110 (410)
T ss_dssp CTTHHHHTTCEEEESCCEEEEETTT---T-----EEEE---TTSCEEECSEEEECCCEE
T ss_pred CHHHHHHCCCEEEeCCEEEEEECCC---C-----EEEE---CCCCEEECCEEEEccCCc
Confidence 3466788999999999999998765 2 3555 478899999999998743
No 219
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=79.53 E-value=2.5 Score=35.83 Aligned_cols=56 Identities=7% Similarity=0.028 Sum_probs=40.6
Q ss_pred HHHHHH-HCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh-Hhhh
Q 026733 53 IRKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG-IKRL 116 (234)
Q Consensus 53 l~~~l~-~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~-~~~L 116 (234)
|.+.|. ..+.+|++|++|++++..++ + + +.|.+ .+|++++||.||-|=...+ +++.
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~--~--~-v~v~~---~dG~~~~adlvVgADG~~S~vR~~ 171 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIEN--G--G-IKIFF---ADGSHENVDVLVGADGSNSKVRKQ 171 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTT--S--C-EEEEE---TTSCEEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCC--C--e-EEEEE---CCCCEEEeeEEEECCCCCcchHHH
Confidence 444443 35678999999999987653 4 3 34666 4899999999999977764 5553
No 220
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=78.41 E-value=3.8 Score=32.92 Aligned_cols=54 Identities=9% Similarity=-0.051 Sum_probs=40.2
Q ss_pred cchHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.+++. |++++ +++|++|..++ + -+.|.+ .+|+.+.+|.||.|+...
T Consensus 57 ~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~---~---~~~v~~---~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWV-EGRVTDAKGSF---G---EFIVEI---DGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEE-ESCEEEEEEET---T---EEEEEE---TTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC---C---eEEEEE---CCCCEEEcCEEEECCCCC
Confidence 5677788888887 56665 45999998876 2 245666 478889999999998753
No 221
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=78.27 E-value=0.89 Score=39.77 Aligned_cols=51 Identities=18% Similarity=0.128 Sum_probs=39.7
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+..++.+.+++.|++++.+ +|++|..++ + .|.+ .+|+.+.+|++|.|+...
T Consensus 58 i~~~~~~~~~~~gv~~i~~-~v~~Id~~~---~-----~V~~---~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 58 ISVPLAPLLPKFNIEFINE-KAESIDPDA---N-----TVTT---QSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp SEEESTTTGGGGTEEEECS-CEEEEETTT---T-----EEEE---TTCCEEECSEEEECCCCE
T ss_pred hhhcHHHHHHHCCcEEEEe-EEEEEECCC---C-----EEEE---CCCCEEECCEEEEeCCCC
Confidence 4445667778889999876 799998876 3 2556 488899999999998864
No 222
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=78.26 E-value=3 Score=36.74 Aligned_cols=55 Identities=11% Similarity=0.035 Sum_probs=37.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCChh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDVP 111 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~~ 111 (234)
.+.+.+.+.++ ++|+++++|++|..+++ + ++ .|.+.. .+|+ .+++|.||.+++..
T Consensus 215 ~~~~~l~~~l~---v~i~~~~~v~~i~~~~~--~--~v-~v~~~~-~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 215 DIVNTLLSILK---LNIKFNSPVTEVKKIKD--D--EY-EVIYST-KDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHC---CCEECSCCEEEEEEEET--T--EE-EEEECC-TTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHhcCE---EEEEECCEEEEEEEcCC--C--cE-EEEEEe-cCCceEEEEcCEEEECcCCC
Confidence 34444554444 99999999999987651 2 33 355521 1454 78999999998853
No 223
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=77.75 E-value=3 Score=36.52 Aligned_cols=53 Identities=9% Similarity=0.007 Sum_probs=36.9
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
-.+.+++.|++++++++|++|..+. + ...+......++..+.+|++|.|+...
T Consensus 63 ~~~~~~~~~i~~~~~~~V~~id~~~---~---~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 63 PEKFYDRKQITVKTYHEVIAINDER---Q---TVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHHHHCCEEEETEEEEEEETTT---T---EEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHHHHhcCCEEEeCCeEEEEEccC---c---EEEEEeccCCceEEEEcCEEEECCCCc
Confidence 3466788999999999999998875 2 222322212234568899999998753
No 224
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=76.67 E-value=2.3 Score=38.52 Aligned_cols=50 Identities=10% Similarity=0.078 Sum_probs=39.2
Q ss_pred hHHHHHHHHHCCcEEEc--CceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhH
Q 026733 50 SGPIRKYITDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~--~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~ 113 (234)
.+...+.|.+.++++.. +++|++|.-+ ||.+ .+| .+++|.||+|+.+...
T Consensus 341 ~~~y~~al~~~nV~lv~~~~~~I~~it~~----------gv~~---~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 341 ETNYYETYNRDNVHLVDIREAPIQEVTPE----------GIKT---ADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp ESSHHHHTTSTTEEEEETTTSCEEEEETT----------EEEE---SSC-EEECSEEEECCCCBSS
T ss_pred CccHHHHhcCCCEEEEecCCCCceEEccC----------eEEe---CCC-eeecCEEEECCccccc
Confidence 34566777788999987 8999998532 4767 488 8999999999998753
No 225
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=76.17 E-value=4.5 Score=34.86 Aligned_cols=51 Identities=10% Similarity=0.029 Sum_probs=40.4
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.....+.+++.|++++++++|++|..++ . .|.+ .+|+.+.+|.+|.|+..
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~v~~id~~~---~-----~v~~---~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 67 ICIRPAQFWEDKAVEMKLGAEVVSLDPAA---H-----TVKL---GDGSAIEYGKLIWATGG 117 (415)
T ss_dssp GBSSCHHHHHHTTEEEEETCCEEEEETTT---T-----EEEE---TTSCEEEEEEEEECCCE
T ss_pred hccCCHHHHHHCCcEEEeCCEEEEEECCC---C-----EEEE---CCCCEEEeeEEEEccCC
Confidence 34455678889999999999999998765 2 3555 47889999999999864
No 226
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=74.92 E-value=4.7 Score=35.22 Aligned_cols=50 Identities=6% Similarity=0.023 Sum_probs=37.8
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
..+.+++.|++++++++|++|..++ + . ..+.. .++++.+.+|.+|.|+..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~---~--~-v~v~~--~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVEN---Q--L-IAWTR--KEEQQWYSYDKLILATGA 113 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTT---T--E-EEEEE--TTEEEEEECSEEEECCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCC---C--E-EEEEe--cCceEEEEcCEEEECCCc
Confidence 4567788999999999999998875 2 2 33332 236678899999999764
No 227
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=72.96 E-value=6.9 Score=35.45 Aligned_cols=54 Identities=7% Similarity=0.034 Sum_probs=39.9
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
+...+....++.|++++++++|++|..++ + . +.+....+|+ .+.+|.+|.|+..
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE---K--T---ITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEeecCCCCEEEEeCCEEEECCCC
Confidence 55667777788999999999999998876 3 2 3332212455 6789999999874
No 228
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=71.62 E-value=4.5 Score=34.88 Aligned_cols=44 Identities=11% Similarity=0.059 Sum_probs=35.2
Q ss_pred HHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 56 YITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 56 ~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+++.|++++++++|+.|..++ . .|.+ .+|+.+.+|.+|.|+..
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~---~-----~v~~---~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQA---H-----TVAL---SDGRTLPYGTLVLATGA 111 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTT---T-----EEEE---TTSCEEECSEEEECCCE
T ss_pred HHHHCCCEEEcCCEEEEEECCC---C-----EEEE---CCCCEEECCEEEECCCC
Confidence 4567899999999999998764 2 3555 37888999999999875
No 229
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=71.50 E-value=11 Score=32.71 Aligned_cols=54 Identities=7% Similarity=0.014 Sum_probs=38.2
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
+...+.+.+++.|++++++++|..|..++ + . |.+....+|+ .+.+|++|.|+..
T Consensus 58 ~~~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 58 VRYMTGEKMESRGVNVFSNTEITAIQPKE---H--Q---VTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp SBSCCHHHHHHTTCEEEETEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hhcCCHHHHHHCCCEEEECCEEEEEeCCC---C--E---EEEEecCCCceEEEeCCEEEEcCCC
Confidence 34445667788999999999999998775 2 2 3343112354 4889999999874
No 230
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=71.45 E-value=2.5 Score=38.24 Aligned_cols=43 Identities=16% Similarity=0.089 Sum_probs=33.7
Q ss_pred HHHCCcEEEc--CceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 57 ITDKGGRFHL--RWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 57 l~~~Gg~i~~--~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
+.+.++++.. +.+|++|.-+ ||++ .+|+.+++|.||+|+.+..
T Consensus 340 l~~~nV~lv~~~~~~I~~it~~----------gv~~---~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVTAK----------GVVT---EDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp GGSTTEEEEETTTSCEEEECSS----------EEEE---TTCCEEECSEEEECCCBSC
T ss_pred hcCCCEEEEeCCCCCccEEecC----------eEEc---CCCCEEECCEEEECCccCc
Confidence 3456888886 7899998432 4777 4899999999999999764
No 231
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=71.41 E-value=9.5 Score=32.35 Aligned_cols=46 Identities=11% Similarity=-0.020 Sum_probs=35.9
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.+.+++.|++++++++|+.|..++ . .|.+ +++.+.+|.+|.|+..
T Consensus 66 ~~~~~~~~~v~~~~~~~v~~i~~~~---~-----~v~~----~~~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 66 PGAMAEQLNARILTHTRVTGIDPGH---Q-----RIWI----GEEEVRYRDLVLAWGA 111 (384)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEGGG---T-----EEEE----TTEEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEeCCEEEEEECCC---C-----EEEE----CCcEEECCEEEEeCCC
Confidence 4556688999999999999998764 2 2545 4567899999999875
No 232
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=70.95 E-value=7.1 Score=33.89 Aligned_cols=51 Identities=24% Similarity=0.346 Sum_probs=39.4
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+++.|++++. .+|++|..++ + .|.+ .+|+.+.+|++|.|+...
T Consensus 61 ~~~~l~~~~~~~gv~~~~-~~v~~id~~~---~-----~V~~---~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFIA-QSAEQIDAEA---Q-----NITL---ADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp HEEECHHHHHTTTCEEEC-SCEEEEETTT---T-----EEEE---TTSCEEECSEEEECCCCE
T ss_pred HHHHHHHHHHHCCCEEEE-eEEEEEEcCC---C-----EEEE---CCCCEEECCEEEECCCCC
Confidence 444567888889999985 6999998765 2 3556 478889999999998864
No 233
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=70.52 E-value=3.4 Score=35.44 Aligned_cols=51 Identities=12% Similarity=0.091 Sum_probs=39.1
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe----EEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK----VVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~----~~~aD~VV~a~~~ 110 (234)
.+...+.+.+++.|++++.+ +|++|..++ + .|.+. +|+ .+.+|.||.|+..
T Consensus 57 ~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~---~-----~V~~~---~g~~~~~~~~~d~lViAtG~ 111 (409)
T 3h8l_A 57 ELKVDLSEALPEKGIQFQEG-TVEKIDAKS---S-----MVYYT---KPDGSMAEEEYDYVIVGIGA 111 (409)
T ss_dssp CEEEEHHHHTGGGTCEEEEC-EEEEEETTT---T-----EEEEE---CTTSCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHhhCCeEEEEe-eEEEEeCCC---C-----EEEEc---cCCcccceeeCCEEEECCCC
Confidence 45677888889999999988 999998765 2 24454 333 4889999999775
No 234
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=69.99 E-value=8.6 Score=33.47 Aligned_cols=54 Identities=9% Similarity=0.138 Sum_probs=38.6
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeec--CCCeEEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDKKVVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~--~~g~~~~aD~VV~a~~~ 110 (234)
+...+.+.+++.|++++++++|+.|..++ + + |.+... ++++.+.+|.+|.|+..
T Consensus 60 ~~~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 60 LFYSSPEELSNLGANVQMRHQVTNVDPET---K--T---IKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp GBSCCHHHHHHTTCEEEESEEEEEEEGGG---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hhhcCHHHHHHcCCEEEeCCEEEEEEcCC---C--E---EEEEecCCCceEEEECCEEEEccCC
Confidence 33345667788999999999999998765 2 2 334321 12567899999999874
No 235
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=69.95 E-value=5.5 Score=34.36 Aligned_cols=34 Identities=12% Similarity=0.208 Sum_probs=27.7
Q ss_pred cCCCCcccchHHHHHHHHHCCcEEEcCceeeEEEeccC
Q 026733 41 LKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDKA 78 (234)
Q Consensus 41 ~~g~~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~ 78 (234)
..|+.. .|+++|++.+ +.+|++|++|++|...++
T Consensus 315 i~GG~~-~l~~~l~~~l---~~~i~l~~~V~~I~~~~~ 348 (376)
T 2e1m_A 315 IEGGSR-MLPETLAKDL---RDQIVMGQRMVRLEYYDP 348 (376)
T ss_dssp ETTCTT-HHHHHHHHHG---GGTEECSEEEEEEEECCC
T ss_pred ECCcHH-HHHHHHHHhc---CCcEEecCeEEEEEECCC
Confidence 456664 6999999886 568999999999998763
No 236
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=69.65 E-value=7.6 Score=36.02 Aligned_cols=29 Identities=10% Similarity=0.000 Sum_probs=24.5
Q ss_pred chHHHHHHHHHCC---cEEEcCceeeEEEecc
Q 026733 49 LSGPIRKYITDKG---GRFHLRWGCREILYDK 77 (234)
Q Consensus 49 l~~~l~~~l~~~G---g~i~~~~~V~~i~~~~ 77 (234)
+-+.|.+.+++.| ++|+++++|+++..++
T Consensus 121 le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 121 IERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp HHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred HHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 4467888888887 8999999999999864
No 237
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=68.37 E-value=5.8 Score=35.59 Aligned_cols=54 Identities=6% Similarity=-0.015 Sum_probs=37.2
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+.+.+....++.|++++++++|++|..++ + . |.+....+| ..+.+|++|.|+..
T Consensus 60 ~~~~~~~~~~~~~i~~~~~~~V~~id~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 60 VLQTPESFKARFNVEVRVKHEVVAIDRAA---K--L---VTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp BCCCHHHHHHHHCCEEETTEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC---C--E---EEEEecCCCCeEEEECCEEEECCCC
Confidence 34445555566899999999999998875 3 2 333211224 37889999999875
No 238
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.31 E-value=8.9 Score=33.78 Aligned_cols=51 Identities=16% Similarity=0.091 Sum_probs=35.3
Q ss_pred HHHHHHH-HCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 52 PIRKYIT-DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~-~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
...+.+. ..|++++++++|+.|..++ + . |.+....+|+ .+.+|.+|.|...
T Consensus 97 ~~~~~~~~~~gv~~~~~~~v~~i~~~~---~--~---v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 97 RNVKTFRDKYGIDAKVRHEVTKVDTEK---K--I---VYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp SCHHHHHHTTCCEEESSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHhhcCCEEEeCCEEEEEECCC---C--E---EEEEEcCCCceEEEEcCEEEECCCC
Confidence 3445554 4599999999999998765 2 2 3343112465 7899999999874
No 239
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=66.42 E-value=11 Score=30.30 Aligned_cols=55 Identities=13% Similarity=0.185 Sum_probs=39.3
Q ss_pred ccchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 47 VYLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 47 ~~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
..+.+.+.+.+++.|++++++ +|.++ .++. .+ + +.|.+. .++ .+.+|++|.|+..
T Consensus 62 ~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~--~-~~v~~~--~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DG--S-FTIKLE--GGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TS--C-EEEEET--TSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CC--c-EEEEEe--cCC-EEEeCEEEEeeCC
Confidence 357778888888999999999 99999 6541 01 2 333232 244 8899999999875
No 240
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=66.38 E-value=6.7 Score=34.17 Aligned_cols=43 Identities=21% Similarity=0.103 Sum_probs=32.5
Q ss_pred HHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEecCEEEEcCCh
Q 026733 57 ITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (234)
Q Consensus 57 l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-~~~~aD~VV~a~~~ 110 (234)
.++.|++++++++|++|..++ ..|.+ .+| ..+.+|.+|.|+..
T Consensus 69 ~~~~gi~v~~~~~v~~i~~~~--------~~v~~---~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 69 IKKRGIDLHLNAEVIEVDTGY--------VRVRE---NGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HHHTTCEEETTCEEEEECSSE--------EEEEC---SSSEEEEECSEEEECCCE
T ss_pred HHhcCcEEEecCEEEEEecCC--------CEEEE---CCceEEEEcCEEEECCCC
Confidence 378999999999999996543 23443 355 47899999999774
No 241
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=66.36 E-value=10 Score=30.78 Aligned_cols=55 Identities=7% Similarity=-0.082 Sum_probs=38.5
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.++..+.+..+..+...++ + ...|.+ .+|+.+.+|+||.|+..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~v~~---~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 61 EFKEIGLNEVMKYPSVHYYEKTVVMITKQST--G---LFEIVT---KDHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHHTTSTTEEEEECCEEEEEECTT--S---CEEEEE---TTCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCEEEEeeEEEEeeecCC--C---cEEEEE---CCCCEEEeCEEEEccCC
Confidence 3556666677777777777777777766542 3 344555 48899999999999864
No 242
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=66.19 E-value=12 Score=31.88 Aligned_cols=50 Identities=14% Similarity=0.036 Sum_probs=39.6
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.....+.+++.|+++++ ++|++|..++ + .|.+ .+|+.+.+|.+|.|+..
T Consensus 59 ~~~~~~~~~~~~~i~~~~-~~v~~id~~~---~-----~v~~---~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 59 LMFRPEKFFQDQAIELIS-DRMVSIDREG---R-----KLLL---ASGTAIEYGHLVLATGA 108 (404)
T ss_dssp SBSSCHHHHHHTTEEEEC-CCEEEEETTT---T-----EEEE---SSSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHhCCCEEEE-EEEEEEECCC---C-----EEEE---CCCCEEECCEEEEeeCC
Confidence 444566778899999999 9999998775 2 3556 47889999999999874
No 243
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=65.87 E-value=7.7 Score=34.28 Aligned_cols=54 Identities=15% Similarity=0.110 Sum_probs=38.2
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.....+.+++.|++++++++|+.|..++ + + |.+...++++.+.+|.+|.|+..
T Consensus 94 ~~~~~~~~~~~~gv~v~~~~~v~~i~~~~---~--~---v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 94 LFYSDKEELESLGAKVYMESPVQSIDYDA---K--T---VTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp GBSCCHHHHHHTTCEEETTCCEEEEETTT---T--E---EEEEETTEEEEEECSEEEECCCE
T ss_pred hhhcCHHHHHhCCCEEEeCCEEEEEECCC---C--E---EEEEeCCcEEEEECCEEEECCCC
Confidence 33345667788999999999999998765 2 2 33320112457899999999874
No 244
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=65.56 E-value=50 Score=26.37 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=41.7
Q ss_pred hHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEee--cCCCeEEecCEEEEcCChh
Q 026733 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSK--ATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~--~~~g~~~~aD~VV~a~~~~ 111 (234)
.+...+.....+.+.+..+.+.++...+ + ...++.+.. ..+++.+++|.||.++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~--~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 191 KTMQERVLNHPKIEVIWNSELVELEGDG---D--LLNGAKIHNLVSGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESS---S--SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred chhhhhhhcccceeeEeeeeeEEEEeee---e--ccceeEEeecccccceeeccccceEecccc
Confidence 4445566677788999999999998765 2 456666642 3456789999999998753
No 245
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=64.48 E-value=5.9 Score=35.19 Aligned_cols=41 Identities=7% Similarity=-0.012 Sum_probs=33.4
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.|++++++++|.+|..++ + .|.+ .+|+.+.+|.+|.|+..
T Consensus 102 ~~gv~~~~g~~v~~id~~~---~-----~V~~---~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD---N-----MVKL---NDGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG---T-----EEEE---TTSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEECCC---C-----EEEE---CCCCEEECCEEEECCCC
Confidence 5789999999999998875 2 3556 47888999999999774
No 246
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=61.98 E-value=14 Score=32.26 Aligned_cols=45 Identities=11% Similarity=0.025 Sum_probs=29.9
Q ss_pred HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
++.|++++++++|++|..++ + . +.+....+|+ .+.+|.+|.|+..
T Consensus 77 ~~~gi~~~~~~~V~~id~~~---~--~---v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRAA---H--T---VEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ----CEEECSEEEEEEETTT---T--E---EEEEETTTCCEEEEECSEEEECCCE
T ss_pred hhcCcEEEECCEEEEEECCC---C--E---EEEeecCCCCEEEEECCEEEEeCCC
Confidence 35899999999999998875 2 2 3333112354 7899999999774
No 247
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.37 E-value=19 Score=31.18 Aligned_cols=49 Identities=8% Similarity=-0.010 Sum_probs=34.2
Q ss_pred hHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC-eEEecCEEEEcCCh
Q 026733 50 SGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK-KVVQADAYVAACDV 110 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g-~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+++.|++++.++.+. ++. + . ..|.. .+| +.+.+|.+|.|+..
T Consensus 94 ~~~~~~~~~~~gv~~~~g~~~~---id~---~--~-v~V~~---~~G~~~i~~d~lViATGs 143 (455)
T 1ebd_A 94 TGGVEGLLKGNKVEIVKGEAYF---VDA---N--T-VRVVN---GDSAQTYTFKNAIIATGS 143 (455)
T ss_dssp HHHHHHHHHTTTCEEEESEEEE---EET---T--E-EEEEE---TTEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHhCCCEEEEEEEEE---ccC---C--e-EEEEe---CCCcEEEEeCEEEEecCC
Confidence 3445677888999999999764 343 2 2 33444 356 67899999999874
No 248
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=58.58 E-value=21 Score=30.16 Aligned_cols=45 Identities=16% Similarity=0.014 Sum_probs=34.0
Q ss_pred HHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 55 KYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 55 ~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+.+.++|++++.+ +|++|..++ + .|.+ .+|+++.+|++|.|+...
T Consensus 63 ~~~~~~gv~~i~~-~v~~id~~~---~-----~v~~---~~g~~i~yd~LviAtG~~ 107 (401)
T 3vrd_B 63 DGLRAHGIQVVHD-SALGIDPDK---K-----LVKT---AGGAEFAYDRCVVAPGID 107 (401)
T ss_dssp HHHHHTTCEEECS-CEEEEETTT---T-----EEEE---TTSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEEe-EEEEEEccC---c-----EEEe---cccceeecceeeeccCCc
Confidence 3456789998765 799998875 2 2445 488899999999998853
No 249
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=58.09 E-value=16 Score=29.45 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=37.7
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+.+.+++.|.+++.++ |..+....+ + ..+.. .++..+.+|.+|.|+..
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--~----~~~~~---~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQ--P----FKLFT---EEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSS--S----EEEEE---TTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCC--c----eEEEE---CCCeEEEEeEEEEcccc
Confidence 467788888999999887665 555555442 2 23334 47889999999999874
No 250
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=57.88 E-value=7.2 Score=35.30 Aligned_cols=47 Identities=11% Similarity=-0.024 Sum_probs=34.9
Q ss_pred HHHHHHHCCcEEE--cCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhH
Q 026733 53 IRKYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGI 113 (234)
Q Consensus 53 l~~~l~~~Gg~i~--~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~ 113 (234)
..+.+.+.++++. ...+|++|.-+ ||.+ .+| .+++|.||+|+.+...
T Consensus 349 y~~al~~~~V~lvd~~~~~I~~it~~----------gv~~---~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 349 YYETYNRDNVELVDLRSTPIVGMDET----------GIVT---TGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp TGGGGGSTTEEEEETTTSCEEEEETT----------EEEE---SSC-EEECSEEEECCCEEES
T ss_pred HHHHhcCCCEEEEeCCCCCceEEeCC----------cEEe---CCC-ceecCEEEECCccccc
Confidence 3445566788887 46889998542 4767 488 8999999999998643
No 251
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=57.86 E-value=19 Score=31.92 Aligned_cols=61 Identities=8% Similarity=-0.031 Sum_probs=39.8
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCc---ceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAE---TYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~---~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+.+=+..+.++.+..|++|++|++|+.... ++. ...+.|+..+..+| +++.|++||++++.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~-~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKS-DPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECS-STTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccc-cccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 444555555667778999999999987542 110 01356666533233 46789999999874
No 252
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=54.97 E-value=5.2 Score=34.63 Aligned_cols=51 Identities=18% Similarity=0.128 Sum_probs=38.3
Q ss_pred chHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 49 LSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 49 l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+...+.+.+++.|++++.+ +|++|..++ + .|.+ .+|+.+.+|.+|.|+...
T Consensus 58 ~~~~~~~~~~~~gv~~~~~-~v~~id~~~---~-----~v~~---~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 58 ISVPLAPLLPKFNIEFINE-KAESIDPDA---N-----TVTT---QSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp SEEESTTTGGGGTEEEECS-CEEEEETTT---T-----EEEE---TTCCEEECSEEEECCCCE
T ss_pred HHHHHHHHHHhcCCEEEEE-EEEEEECCC---C-----EEEE---CCCcEEECCEEEEcCCcc
Confidence 4455667778899999975 899997764 2 3555 477889999999997753
No 253
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=54.22 E-value=3.3 Score=34.56 Aligned_cols=49 Identities=16% Similarity=0.034 Sum_probs=36.6
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhCC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLLP 118 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll~ 118 (234)
.+...|.+.++++|++|+. ++|++|...+ .+.||.||.|....+- .|++
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--------------------~~~a~~VV~A~G~~s~-~l~~ 191 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA--------------------REGADVIVNCTGVWAG-ALQR 191 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--------------------HTTCSEEEECCGGGGG-GTSC
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--------------------cCCCCEEEECCCcChH-hhcC
Confidence 4678999999999999998 8988774332 1358999999887652 3444
No 254
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=53.20 E-value=24 Score=30.70 Aligned_cols=49 Identities=12% Similarity=0.032 Sum_probs=34.3
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCChh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDVP 111 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~~ 111 (234)
+.+.+.+++.|++++.++.+. ++. + . ..|.+ .+| +.+.+|.+|.|....
T Consensus 95 ~~l~~~~~~~gv~~~~g~~~~---id~---~--~-v~V~~---~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 95 AGVHFLMKKNKITEIHGYGTF---ADA---N--T-LLVDL---NDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHTTCEEECEEEEE---SSS---S--E-EEEEE---TTSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ecC---C--e-EEEEe---CCCceEEEEcCEEEECCCCC
Confidence 345677888999999998754 343 2 2 33444 366 689999999998753
No 255
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.17 E-value=22 Score=30.90 Aligned_cols=48 Identities=10% Similarity=0.084 Sum_probs=33.3
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+.+.+.+++.|++++.++.+. ++. + . ..|.+ .+| +.+.+|.+|.|...
T Consensus 100 ~~~~~~~~~~gv~~~~g~~~~---~~~---~--~-~~v~~---~~G~~~~i~~d~lIiAtGs 149 (470)
T 1dxl_A 100 RGIEGLFKKNKVTYVKGYGKF---VSP---S--E-ISVDT---IEGENTVVKGKHIIIATGS 149 (470)
T ss_dssp HHHHHHHHHHTCEEEESCEEE---EET---T--E-EEECC---SSSCCEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ecC---C--E-EEEEe---CCCceEEEEcCEEEECCCC
Confidence 345667788999999999764 343 2 2 23433 356 68999999999875
No 256
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=46.24 E-value=25 Score=30.71 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=33.2
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eE------EecCEEEEcCChh
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KV------VQADAYVAACDVP 111 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~------~~aD~VV~a~~~~ 111 (234)
.+.+.+++.|++++.++.+.. +. + -..|.+ .+| +. +.+|+||.|....
T Consensus 101 ~~~~~~~~~gv~~~~g~~~~~---~~---~---~v~V~~---~~G~~~~~~~~~~i~~d~lViAtGs~ 156 (478)
T 1v59_A 101 GIELLFKKNKVTYYKGNGSFE---DE---T---KIRVTP---VDGLEGTVKEDHILDVKNIIVATGSE 156 (478)
T ss_dssp HHHHHHHHTTCEEEESEEEES---SS---S---EEEEEC---CTTCTTCCSSCEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCCEEEEEEEEEc---cC---C---eEEEEe---cCCCcccccccceEEeCEEEECcCCC
Confidence 456677889999999998752 33 2 233443 244 45 8999999998753
No 257
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=45.59 E-value=23 Score=31.30 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=34.1
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
+.+.+.+ +.|++++++++|.+|..++ + .+.-.... +++ .+.+|++|.|...
T Consensus 165 ~~l~~~l-~~~v~~~~~~~v~~i~~~~---~--~~~~~~~~---~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 165 EELVGKL-NENTKIYLETSALGVFDKG---E--YFLVPVVR---GDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHTC-CTTEEEETTEEECCCEECS---S--SEEEEEEE---TTEEEEEEESCEEECCCE
T ss_pred HHHHHHH-hcCCEEEcCCEEEEEEcCC---c--EEEEEEec---CCeEEEEECCEEEECCCC
Confidence 3333333 5699999999999998775 2 23222221 454 6889999999774
No 258
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=44.63 E-value=17 Score=29.74 Aligned_cols=39 Identities=13% Similarity=0.007 Sum_probs=28.9
Q ss_pred HCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChh
Q 026733 59 DKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 59 ~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+.|. ++.+.+|+++..+ +|.+ .+|+.+++|.||.+++..
T Consensus 246 ~~g~-i~~~~~v~~~~~~----------~v~~---~~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 246 ARGV-LAAVPPPARFSPT----------GMQW---ADGTERAFDAVIWCTGFR 284 (357)
T ss_dssp HTTC-CCEECCCSEEETT----------EEEC---TTSCEEECSEEEECCCBC
T ss_pred hcCc-eEEecCcceEeCC----------eeEE---CCCCEecCCEEEECCCcC
Confidence 4555 7778888877432 3556 488999999999998864
No 259
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=43.14 E-value=3.3 Score=31.76 Aligned_cols=33 Identities=12% Similarity=0.040 Sum_probs=25.4
Q ss_pred eEEEEEee--CCCCCCCCCHHHHHHHHHHHHHhhC
Q 026733 199 SLLQCVLT--PGDPYMPLPNDEIIRRVAKQLYFHH 231 (234)
Q Consensus 199 ~~~~~~~~--~~~~~~~~~~eei~~~~l~~L~~~~ 231 (234)
.++..++. .+..+..++++++.+.++++|.++|
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~ 71 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVH 71 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHH
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 45555543 3456778899999999999999998
No 260
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=42.07 E-value=33 Score=29.99 Aligned_cols=48 Identities=10% Similarity=0.020 Sum_probs=32.2
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC------------eEEecCEEEEcCChh
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK------------KVVQADAYVAACDVP 111 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g------------~~~~aD~VV~a~~~~ 111 (234)
.+.+.+++.|++++.++.+. .++ + . ..|... +| ..+.+|.+|.|....
T Consensus 100 ~~~~~~~~~gv~~~~g~~~~---~~~---~--~-v~v~~~---~g~~~~~~~~~g~~~~i~ad~lViAtGs~ 159 (482)
T 1ojt_A 100 GLAGMAKSRKVDVIQGDGQF---LDP---H--H-LEVSLT---AGDAYEQAAPTGEKKIVAFKNCIIAAGSR 159 (482)
T ss_dssp HHHHHHHHTTCEEEEEEEEE---EET---T--E-EEEEEE---EEEETTEEEEEEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHhCCcEEEeeEEEE---ccC---C--E-EEEEec---CCcccccccccCcceEEEcCEEEECCCCC
Confidence 35567788999999998765 333 2 2 234332 34 578899999998754
No 261
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=40.82 E-value=24 Score=31.52 Aligned_cols=48 Identities=13% Similarity=0.081 Sum_probs=34.6
Q ss_pred HHHHHHHHHCCcEEE--cCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 51 GPIRKYITDKGGRFH--LRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~--~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
+...+.+.+.++++. .+++|++|.-+ +|.+ .+ +.+++|.||.++.+..
T Consensus 342 ~~y~~~~~~~~v~lv~~~~~~i~~i~~~----------gv~~---~d-~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 342 IDYYEMFNRDNVHLVDTLSAPIETITPR----------GVRT---SE-REYELDSLVLATGFDA 391 (542)
T ss_dssp SSHHHHTTSTTEEEEETTTSCEEEECSS----------EEEE---SS-CEEECSEEEECCCCCC
T ss_pred ccHHHHhCCCCEEEEecCCCCceEEcCC----------eEEe---CC-eEEecCEEEEcCCccc
Confidence 445555666677776 47889998421 4777 36 8899999999998764
No 262
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=40.61 E-value=49 Score=21.87 Aligned_cols=34 Identities=9% Similarity=0.293 Sum_probs=23.8
Q ss_pred EEEEeeCCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 026733 201 LQCVLTPGDPYMPLPNDEIIRRVAKQLYFHHPKV 234 (234)
Q Consensus 201 ~~~~~~~~~~~~~~~~eei~~~~l~~L~~~~P~~ 234 (234)
+++++.....+-.-.-+.|.+.+.+++.+.||++
T Consensus 3 VEi~~dK~~~lp~ga~~aL~~EL~kRl~~~fpd~ 36 (81)
T 1ghh_A 3 IEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDN 36 (81)
T ss_dssp EEEEEETTSCCCTTHHHHHHHHHHHHHHHHCSSS
T ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHhhCCCC
Confidence 5666655433322335888999999999999973
No 263
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=40.32 E-value=43 Score=29.07 Aligned_cols=48 Identities=8% Similarity=0.023 Sum_probs=33.3
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
..+.+.+++.|++++.++.+. + +. + . ..|.. .+| +.+.+|++|.|+..
T Consensus 97 ~~~~~~~~~~~v~~~~g~~~~-i--~~---~--~-~~v~~---~~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 97 GGVEYLFKKNKVTYYKGEGSF-E--TA---H--S-IRVNG---LDGKQEMLETKKTIIATGS 146 (468)
T ss_dssp HHHHHHHHHHTCEEEEEEEEE-E--ET---T--E-EEEEE---TTSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE-e--eC---C--E-EEEEe---cCCceEEEEcCEEEECCCC
Confidence 345677888999999998653 3 33 2 2 33444 366 67899999999874
No 264
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=37.46 E-value=75 Score=27.46 Aligned_cols=43 Identities=14% Similarity=0.278 Sum_probs=31.2
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.+.+++.|++++.++.+. .++ + .|.+ +++.+.+|++|.|+..
T Consensus 102 ~~~~~~~~gv~~~~g~~~~---~~~---~-----~v~v----~~~~~~~d~lviATGs 144 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV---LDG---K-----QVEV----DGQRIQCEHLLLATGS 144 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE---EET---T-----EEEE----TTEEEECSEEEECCCE
T ss_pred HHHHHHhCCcEEEEEEEEE---ccC---C-----EEEE----eeEEEEeCEEEEeCCC
Confidence 4467788999999998764 233 2 2555 3378899999999875
No 265
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=37.22 E-value=60 Score=28.19 Aligned_cols=43 Identities=7% Similarity=0.079 Sum_probs=31.0
Q ss_pred HHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 53 IRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 53 l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.+.+++.|++++.++.+. ++. + .|.+ +|+.+.+|++|.|+..
T Consensus 99 ~~~~~~~~gv~~~~g~~~~---~~~---~-----~v~v----~g~~~~~d~lViATGs 141 (464)
T 2eq6_A 99 VGTLLKGNGVELLRGFARL---VGP---K-----EVEV----GGERYGAKSLILATGS 141 (464)
T ss_dssp HHHHHHHTTCEEEESCEEE---EET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHhCCCEEEeeeEEE---ccC---C-----EEEE----ccEEEEeCEEEEcCCC
Confidence 4556788999999998654 233 2 2555 3678899999999874
No 266
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=36.27 E-value=61 Score=28.41 Aligned_cols=54 Identities=13% Similarity=-0.022 Sum_probs=33.4
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
+.+.+.+++.|++++.++ ++.|..+++.++ +...|.. .+|+ .+.+|.+|.|+..
T Consensus 99 ~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~--~~~~V~~---~~g~~~~~~~d~lviATGs 154 (499)
T 1xdi_A 99 ADITAQLLSMGVQVIAGR-GELIDSTPGLAR--HRIKATA---ADGSTSEHEADVVLVATGA 154 (499)
T ss_dssp HHHHHHHHHTTCEEEESE-EEECCSSSCCSS--EEEEEEC---TTSCEEEEEESEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeE-EEEecCcccCCC--CEEEEEe---CCCcEEEEEeCEEEEcCCC
Confidence 345677889999999997 665544200001 1123333 3565 7899999998763
No 267
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=34.09 E-value=84 Score=25.13 Aligned_cols=52 Identities=15% Similarity=-0.039 Sum_probs=39.1
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.....+...+.+..++.+..+....... . ..+ . .+++.+.+|++|.|+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~-~---~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 63 DLSTKMFEHAKKFGAVYQYGDIKSVEDKGE---Y----KVI-N---FGNKELTAKAVIIATGA 114 (312)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEEECSS---C----EEE-E---CSSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhhccccccceeeeeeeeeec---c----eee-c---cCCeEEEeceeEEcccC
Confidence 356677788888999999998888776654 2 222 2 37889999999999874
No 268
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=33.82 E-value=44 Score=29.06 Aligned_cols=48 Identities=8% Similarity=-0.131 Sum_probs=32.9
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeE--EecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKV--VQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~--~~aD~VV~a~~~ 110 (234)
..+.+.+++.|++++.+ +|+.+..+ ...|.. .+|+. +.+|++|.|+..
T Consensus 93 ~~~~~~~~~~~v~~~~g-~v~~id~~--------~~~V~~---~~g~~~~~~~d~lviAtG~ 142 (466)
T 3l8k_A 93 QHKRNMSQYETLTFYKG-YVKIKDPT--------HVIVKT---DEGKEIEAETRYMIIASGA 142 (466)
T ss_dssp HHHHHHTTCTTEEEESE-EEEEEETT--------EEEEEE---TTSCEEEEEEEEEEECCCE
T ss_pred chHHHHHHhCCCEEEEe-EEEEecCC--------eEEEEc---CCCcEEEEecCEEEECCCC
Confidence 44555666789999888 56666422 134544 46777 899999999874
No 269
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=33.56 E-value=56 Score=31.63 Aligned_cols=57 Identities=9% Similarity=-0.025 Sum_probs=37.5
Q ss_pred chHHHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEee-----c-------CCCeEEecCEEEEcCChh
Q 026733 49 LSGPIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSK-----A-------TDKKVVQADAYVAACDVP 111 (234)
Q Consensus 49 l~~~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~-----~-------~~g~~~~aD~VV~a~~~~ 111 (234)
+.+.+.+.+.+. |++++++++|.+|..++ ++..+.... . .++..+.+|+||+|+...
T Consensus 183 ~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~------~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 183 WIEQVTSELAEAEETTHLQRTTVFGSYDAN------YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHHHHHHHSTTEEEESSEEEEEEETTT------EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEeeecCC------ceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 445666667775 99999999999997543 444432210 0 122368899999998753
No 270
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=30.74 E-value=87 Score=27.14 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=30.5
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+++.|++++.++. +.+ +. . .|.+ +|+.+.+|.+|.|+..
T Consensus 97 ~~~~~~~~~gv~~~~g~~-~~i--~~---~-----~v~~----~g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 97 FWDGYVERLGITRVDGHA-RFV--DA---H-----TIEV----EGQRLSADHIVIATGG 140 (463)
T ss_dssp HHHHHHHHTTCEEEESCE-EEE--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHHCCCEEEEeEE-EEc--cC---C-----EEEE----CCEEEEcCEEEECCCC
Confidence 345566789999999864 333 32 2 2445 6778899999999874
No 271
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=30.43 E-value=55 Score=28.57 Aligned_cols=47 Identities=15% Similarity=0.150 Sum_probs=31.3
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCe--EEecCEEEEcCCh
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKK--VVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~--~~~aD~VV~a~~~ 110 (234)
.+.+.+++.|++++.++ ++.+ +. + . ..|.. .+|+ .+.+|.+|.|+..
T Consensus 110 ~~~~~~~~~gv~~~~g~-~~~i--~~---~--~-~~v~~---~~g~~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 110 IYQKNLEKEKVDVVFGW-ARFN--KD---G--N-VEVQK---RDNTTEVYSANHILVATGG 158 (479)
T ss_dssp HHHHHHHHTTEEEEEEE-EEEC--TT---S--C-EEEEE---SSSCCEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeE-EEEe--eC---C--E-EEEEe---CCCcEEEEEeCEEEEcCCC
Confidence 34556778999999885 5544 33 2 2 33443 3565 7899999999864
No 272
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=30.23 E-value=78 Score=27.79 Aligned_cols=48 Identities=25% Similarity=0.350 Sum_probs=30.7
Q ss_pred HHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC-----CeEEecCEEEEcCCh
Q 026733 52 PIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-----KKVVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~-----g~~~~aD~VV~a~~~ 110 (234)
.+.+.+++. |++++.++ ++.+ +. . . |.+....+ ++.+.+|++|.|+..
T Consensus 112 ~~~~~l~~~~gv~~~~g~-~~~i--~~---~--~---v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 112 SYEGMFNDTEGLDFFLGW-GSLE--SK---N--V---VVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp HHHHHHHHCTTEEEEESE-EEEE--ET---T--E---EEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHhcCCCeEEEEeE-EEEe--eC---C--E---EEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 344556778 99999996 5444 32 2 2 44421113 678899999999764
No 273
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=30.11 E-value=82 Score=27.25 Aligned_cols=47 Identities=13% Similarity=0.066 Sum_probs=31.9
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCC-C-eEEecCEEEEcCCh
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATD-K-KVVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~-g-~~~~aD~VV~a~~~ 110 (234)
.+.+.+++.|++++.++.+ .+ +. + . ..|.+ .+ | +.+.+|.+|.|+..
T Consensus 102 ~~~~~~~~~gv~~~~g~~~-~~--~~---~--~-~~v~~---~~gg~~~~~~d~lViAtGs 150 (474)
T 1zmd_A 102 GIAHLFKQNKVVHVNGYGK-IT--GK---N--Q-VTATK---ADGGTQVIDTKNILIATGS 150 (474)
T ss_dssp HHHHHHHHTTCEEEESEEE-EE--ET---T--E-EEEEC---TTSCEEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEEEEE-Ee--cC---C--E-EEEEe---cCCCcEEEEeCEEEECCCC
Confidence 3467788899999999754 23 33 2 2 23433 24 4 57899999999875
No 274
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=30.03 E-value=31 Score=20.96 Aligned_cols=15 Identities=13% Similarity=0.160 Sum_probs=12.4
Q ss_pred HHHHHHHHHhhCCCC
Q 026733 220 IRRVAKQLYFHHPKV 234 (234)
Q Consensus 220 ~~~~l~~L~~~~P~~ 234 (234)
-+..+++|..+||++
T Consensus 12 ~~~~~~~L~~MFP~l 26 (54)
T 1p3q_Q 12 RKDTLNTLQNMFPDM 26 (54)
T ss_dssp HHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHcccC
Confidence 346889999999986
No 275
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=26.75 E-value=91 Score=26.90 Aligned_cols=44 Identities=11% Similarity=-0.014 Sum_probs=29.3
Q ss_pred HHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 55 KYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 55 ~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+.+++. |++++.++ ++.+. . + . ..|.+ .+| +.+.+|++|.|+..
T Consensus 102 ~~~~~~~~v~~~~g~-~~~~~--~---~--~-~~v~~---~~g~~~~~~~d~lviAtGs 148 (467)
T 1zk7_A 102 GILGGNPAITVVHGE-ARFKD--D---Q--S-LTVRL---NEGGERVVMFDRCLVATGA 148 (467)
T ss_dssp HHHTTCTTEEEEEEE-EEEEE--T---T--E-EEEEE---TTSSEEEEECSEEEECCCE
T ss_pred HHHhccCCeEEEEEE-EEEcc--C---C--E-EEEEe---CCCceEEEEeCEEEEeCCC
Confidence 445566 99998875 65553 2 2 1 33444 366 67899999999874
No 276
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=25.43 E-value=1.2e+02 Score=26.14 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=30.4
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+++.|++++.++. +.+ +. . .|.+ +|+.+.+|.+|.|+..
T Consensus 98 ~~~~~~~~~~v~~~~g~~-~~i--~~---~-----~v~~----~g~~~~~d~lviAtGs 141 (450)
T 1ges_A 98 SYENVLGKNNVDVIKGFA-RFV--DA---K-----TLEV----NGETITADHILIATGG 141 (450)
T ss_dssp HHHHHHHHTTCEEEESCC-EEE--ET---T-----EEEE----TTEEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEE-EEe--cC---C-----EEEE----CCEEEEeCEEEECCCC
Confidence 344556788999999864 333 32 2 2444 5778999999999874
No 277
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=25.22 E-value=1.2e+02 Score=26.48 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=30.8
Q ss_pred HHHHHHHHC-CcEEEcCceeeEEEeccCCCCcceEEEEEEeec--CCC---eEEecCEEEEcCCh
Q 026733 52 PIRKYITDK-GGRFHLRWGCREILYDKAANAETYVKGLAMSKA--TDK---KVVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~~~-Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~--~~g---~~~~aD~VV~a~~~ 110 (234)
.+.+.+++. |++++.++ ++.+ +. + + |.+... .+| +.+.+|++|.|+..
T Consensus 108 ~~~~~l~~~~gv~~~~g~-~~~i--~~---~--~---v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 108 SYEGMFADTEGLTFHQGF-GALQ--DN---H--T---VLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp HHHHHHHTSTTEEEEESE-EEEE--ET---T--E---EEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred HHHHHHhcCCCcEEEEeE-EEEe--eC---C--E---EEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 445566778 99999997 5554 33 2 2 334210 145 67899999999764
No 278
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=24.86 E-value=57 Score=28.14 Aligned_cols=46 Identities=9% Similarity=-0.001 Sum_probs=31.5
Q ss_pred HHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 52 PIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 52 ~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
.+.+.+++.|++++.++.+. ++. + .+.+. .+|+.+.+|++|.|+..
T Consensus 94 ~~~~~~~~~~v~~~~g~~~~---i~~---~-----~~~v~--~~g~~~~~d~lviAtG~ 139 (455)
T 2yqu_A 94 GVEFLFKKNGIARHQGTARF---LSE---R-----KVLVE--ETGEELEARYILIATGS 139 (455)
T ss_dssp HHHHHHHHHTCEEEESCEEE---SSS---S-----EEEET--TTCCEEEEEEEEECCCE
T ss_pred HHHHHHHhCCCEEEEeEEEE---ecC---C-----eEEEe--eCCEEEEecEEEECCCC
Confidence 34567788899999998653 333 2 23342 15678899999999874
No 279
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=24.44 E-value=30 Score=29.10 Aligned_cols=50 Identities=16% Similarity=-0.027 Sum_probs=36.7
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhhHhhhC
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPGIKRLL 117 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~~~~Ll 117 (234)
.+.+.|.+.+++.|++|+++++|++|... +.+.+|.||.|....+.++.+
T Consensus 99 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--------------------~~~~ad~vV~AdG~~S~R~~l 148 (381)
T 3c4a_A 99 GLVHALRDKCRSQGIAIRFESPLLEHGEL--------------------PLADYDLVVLANGVNHKTAHF 148 (381)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCSGGGC--------------------CGGGCSEEEECCGGGGGTCCS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEeccchhc--------------------ccccCCEEEECCCCCchHHhh
Confidence 56788889999999999999999887321 013588888888765434444
No 280
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=24.03 E-value=32 Score=29.29 Aligned_cols=29 Identities=10% Similarity=-0.054 Sum_probs=24.1
Q ss_pred CcccchHHHHHHHHHCCcEEEcCceeeEE
Q 026733 45 PDVYLSGPIRKYITDKGGRFHLRWGCREI 73 (234)
Q Consensus 45 ~~~~l~~~l~~~l~~~Gg~i~~~~~V~~i 73 (234)
+...+.+.+.+.++++|++++++++|++|
T Consensus 186 ~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 214 (385)
T 3klj_A 186 LDRDGGLFLKDKLDRLGIKIYTNSNFEEM 214 (385)
T ss_dssp SCHHHHHHHHHHHHTTTCEEECSCCGGGC
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEc
Confidence 34456778889999999999999998776
No 281
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=23.22 E-value=80 Score=20.29 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.4
Q ss_pred hHHHHHHHHHCCcEEEc
Q 026733 50 SGPIRKYITDKGGRFHL 66 (234)
Q Consensus 50 ~~~l~~~l~~~Gg~i~~ 66 (234)
.+.+.+.++++||++.-
T Consensus 23 ~~~l~~~i~~~GG~~~~ 39 (92)
T 4id3_A 23 RLQLHEMIVLHGGKFLH 39 (92)
T ss_dssp HHHHHHHHHHTTCEEES
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 56799999999999863
No 282
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=22.09 E-value=77 Score=27.55 Aligned_cols=22 Identities=14% Similarity=0.098 Sum_probs=17.8
Q ss_pred EEEEeecCCCeEEecCEEEEcCChh
Q 026733 87 GLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 87 ~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
+|.+ .+|+.+++|.||.++...
T Consensus 254 ~V~~---~dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 254 NAYF---ADGSSEKVDAIILCTGYI 275 (464)
T ss_dssp EEEE---TTSCEEECSEEEECCCBC
T ss_pred EEEE---CCCCEEeCCEEEECCCCC
Confidence 3666 488889999999998864
No 283
>2ahq_A Sigma-54, RNA polymerase sigma factor RPON; sigma-54,sigma factors, solution structure, transcription; NMR {Aquifex aeolicus} PDB: 2o8k_A 2o9l_A
Probab=21.80 E-value=92 Score=20.20 Aligned_cols=42 Identities=7% Similarity=0.138 Sum_probs=31.1
Q ss_pred cccccHHHHHHHHHHHhcCCccceeeecCCCCcccchHHHHHHHHHCCcEE
Q 026733 14 CDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRF 64 (234)
Q Consensus 14 ~~~~SA~~~~~~l~~~~~~~~~~~~g~~~g~~~~~l~~~l~~~l~~~Gg~i 64 (234)
.+++|+..+...++.+.... + ++.++++ +.+++.|++.|..|
T Consensus 13 g~~~S~~~Ik~~Ik~lI~~E---d---~~kPlSD---~~I~~~L~~~Gi~I 54 (76)
T 2ahq_A 13 AEGLTQGELMKLIKEIVENE---D---KRKPYSD---QEIANILKEKGFKV 54 (76)
T ss_dssp CCSCCHHHHHHHHHHHGGGC---C---SSSCCCH---HHHHHHHTTTSSCC
T ss_pred CccccHHHHHHHHHHHHHhc---C---CCCCCCH---HHHHHHHHHcCCCc
Confidence 45789999999999865422 1 4557775 78889999888765
No 284
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=21.79 E-value=1.3e+02 Score=26.60 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=29.5
Q ss_pred HHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 58 TDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 58 ~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
++.|++++++.+|+.+.. + .|.+ +|+.+.+|.+|.|+..
T Consensus 146 ~~~gv~~~~~~~v~~i~~-----~-----~v~~----~g~~~~~d~lViATGs 184 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDN-----H-----TVEA----AGKVFKAKNLILAVGA 184 (523)
T ss_dssp HTSCCCEEESSCCEEEET-----T-----EEEE----TTEEEEBSCEEECCCE
T ss_pred ccCCcEEEEeeEEEEeeC-----C-----EEEE----CCEEEEeCEEEECCCC
Confidence 778999997888887742 2 2445 4778999999999874
No 285
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=21.66 E-value=71 Score=18.54 Aligned_cols=14 Identities=29% Similarity=0.444 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHh
Q 026733 216 NDEIIRRVAKQLYF 229 (234)
Q Consensus 216 ~eei~~~~l~~L~~ 229 (234)
++||++.+.+++.|
T Consensus 13 KqEIL~E~RkElqK 26 (45)
T 1use_A 13 KQELLEEVKKELQK 26 (45)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35555555555544
No 286
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.23 E-value=52 Score=20.85 Aligned_cols=13 Identities=8% Similarity=0.222 Sum_probs=10.3
Q ss_pred HHHHHHHhhCCCC
Q 026733 222 RVAKQLYFHHPKV 234 (234)
Q Consensus 222 ~~l~~L~~~~P~~ 234 (234)
..+++|..+||++
T Consensus 20 ~~v~~L~~MFP~l 32 (67)
T 2dhy_A 20 QAMDDFKTMFPNM 32 (67)
T ss_dssp HHHHHHHHHCSSS
T ss_pred HHHHHHHHHCCCC
Confidence 4567799999975
No 287
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=21.07 E-value=1.2e+02 Score=26.10 Aligned_cols=47 Identities=9% Similarity=-0.066 Sum_probs=30.6
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~ 110 (234)
+.+...++..|++++.++. +.+ +. + . ..|.. +|+.+.+|+||.|+..
T Consensus 112 ~~~~~~~~~~gv~~~~g~~-~~~--~~---~--~-~~v~~----~g~~~~~d~lviAtG~ 158 (478)
T 3dk9_A 112 AIYQNNLTKSHIEIIRGHA-AFT--SD---P--K-PTIEV----SGKKYTAPHILIATGG 158 (478)
T ss_dssp HHHHHHHHHTTCEEEESCE-EEC--SC---S--S-CEEEE----TTEEEECSCEEECCCE
T ss_pred HHHHHHHHhCCcEEEEeEE-EEe--eC---C--e-EEEEE----CCEEEEeeEEEEccCC
Confidence 4455667788999988862 222 22 1 1 23443 7788999999999763
No 288
>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5
Probab=20.79 E-value=1e+02 Score=21.82 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=14.9
Q ss_pred cchHHHHHHHHHCCcEEE
Q 026733 48 YLSGPIRKYITDKGGRFH 65 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~ 65 (234)
.-.+.|.+.++.+||++.
T Consensus 54 ~~~~~L~~~i~~~Gg~v~ 71 (132)
T 1wf6_A 54 RKLDKLRRLINSGGGVRF 71 (132)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 346789999999999984
No 289
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=20.76 E-value=2.2e+02 Score=24.66 Aligned_cols=48 Identities=10% Similarity=-0.017 Sum_probs=31.7
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+.+...+++.|++++.++.+. ++. + ...|.. .+| +.+.+|+||.|+..
T Consensus 119 ~~~~~~~~~~~v~~~~g~~~~---~~~---~---~~~v~~---~~g~~~~~~~d~lViATGs 168 (491)
T 3urh_A 119 DGVSFLFKKNKIDGFQGTGKV---LGQ---G---KVSVTN---EKGEEQVLEAKNVVIATGS 168 (491)
T ss_dssp HHHHHHHHHTTCEEEESEEEE---CSS---S---EEEEEC---TTSCEEEEECSEEEECCCE
T ss_pred HHHHHHHHhCCCEEEEEEEEE---ecC---C---EEEEEe---CCCceEEEEeCEEEEccCC
Confidence 345566788999998887543 333 2 233433 355 57899999999764
No 290
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=20.62 E-value=1.1e+02 Score=26.77 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=26.3
Q ss_pred EEEcCceeeEEEeccCCCCcceEE-----------EEEEeecCCCeEEecCEEEEcCChh
Q 026733 63 RFHLRWGCREILYDKAANAETYVK-----------GLAMSKATDKKVVQADAYVAACDVP 111 (234)
Q Consensus 63 ~i~~~~~V~~i~~~~~~~~~~~~~-----------~v~~~~~~~g~~~~aD~VV~a~~~~ 111 (234)
.+..+..|..+....+ .+ ++. ++.. ++|+.+++|.||+|+...
T Consensus 355 ~l~~~~~v~~~~~~~~-~~--~~~v~~~~~~~~~~~v~~---~dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 355 RILPERKITRVEHHGP-QS--RMRIHLKSSKPESEGAAN---DVKETLEVDALMVATGYN 408 (501)
T ss_dssp EEECSEEEEEEECCSS-SS--CEEEEEEESCC-----------CCCEEEESEEEECCCEE
T ss_pred eecCCcceeeeeecCC-CC--eEEEEeeeeEEeCCeeEe---CCCeEEECCEEEECcCCC
Confidence 5666777777665432 12 221 2222 478899999999999974
No 291
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=20.40 E-value=1.2e+02 Score=26.11 Aligned_cols=48 Identities=15% Similarity=0.190 Sum_probs=31.8
Q ss_pred HHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCC--eEEecCEEEEcCCh
Q 026733 51 GPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDK--KVVQADAYVAACDV 110 (234)
Q Consensus 51 ~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g--~~~~aD~VV~a~~~ 110 (234)
+.+...+++.|++++.++.+. ++. + ...|.. .+| +.+.+|++|.|+..
T Consensus 103 ~~~~~~~~~~~v~~~~g~~~~---~~~---~---~~~v~~---~~g~~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 103 GGVASLIKANGVTLFEGHGKL---LAG---K---KVEVTA---ADGSSQVLDTENVILASGS 152 (476)
T ss_dssp HHHHHHHHHHTCEEEESEEEE---CST---T---CEEEEC---TTSCEEEECCSCEEECCCE
T ss_pred HHHHHHHHhCCCEEEEeEEEE---ecC---C---EEEEEc---CCCceEEEEcCEEEEcCCC
Confidence 344566778899999887554 343 2 133433 355 57889999999774
No 292
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=20.38 E-value=40 Score=27.90 Aligned_cols=43 Identities=16% Similarity=0.147 Sum_probs=34.0
Q ss_pred cchHHHHHHHHHCCcEEEcCceeeEEEeccCCCCcceEEEEEEeecCCCeEEecCEEEEcCChhh
Q 026733 48 YLSGPIRKYITDKGGRFHLRWGCREILYDKAANAETYVKGLAMSKATDKKVVQADAYVAACDVPG 112 (234)
Q Consensus 48 ~l~~~l~~~l~~~Gg~i~~~~~V~~i~~~~~~~~~~~~~~v~~~~~~~g~~~~aD~VV~a~~~~~ 112 (234)
.+...|.+.++++|++|+. ++|++|.. . . . .||.||.|....+
T Consensus 143 ~~~~~l~~~~~~~G~~i~~-~~v~~l~~--------~-----~----~----~a~~VV~A~G~~s 185 (363)
T 1c0p_A 143 KYCQYLARELQKLGATFER-RTVTSLEQ--------A-----F----D----GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCSBGGG--------T-----C----S----SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEE-EEcccHhh--------c-----C----c----CCCEEEECCCcch
Confidence 5678999999999999998 88887721 1 1 1 6899999988765
Done!